Psyllid ID: psy10832

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90
Protein Sequence
MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPPALLVPLMKGSRHSNC
Secondary Structure (PSIPRED)
cEEcccccccccccccHHHHHHHHcccccccccccccccHHHHHHHHHHccccccccccHHHHHccHHHHcccccccHHHHHHHHHHccc
Secondary Structure Prediction (SSPRO)
cHHHHHccccccccccccEEEEEEcccccccccccHHccHHHHHHHHHHHcccHHHcccHHHHHccHHHHHccccHHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
mvvemvdgeppffnepplqamrrirdmpppklknthkvsPRLQGFLERLLVRDPLQRATAAELlqhpflrqagppallvplmkgsrhsnc
Flexible Loop (DISEMBL)
mvvemvdgeppffnepplqamrriRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELlqhpflrqagppaLLVPLMkgsrhsnc
Low Complexity Region (SEG)
MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPPALLVPLMKGSRHSNC
Disordered region (IsUnstruct)
******************************************QGFLERLLVRDPLQRATAAELLQHPFLRQA****LL************
Disordered Region (DISOPRED)
MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPPALLVPLMKGSR****
Disordered Region (DISEMBL)
MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPPALLVPLM********
Disordered Region (DISPRO)
MVV**VDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPPALLVPLMKGSRHS*C
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPPALLVPLMKGSRHSNC
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	90	2.2.26 [Sep-21-2011]
Q9VXE5	639	Serine/threonine-protein	yes	N/A	0.966	0.136	0.850	4e-38
O96013	591	Serine/threonine-protein	yes	N/A	0.955	0.145	0.755	5e-32
Q8BTW9	593	Serine/threonine-protein	yes	N/A	0.955	0.145	0.744	2e-31
Q9P286	719	Serine/threonine-protein	no	N/A	0.966	0.121	0.689	4e-30
Q8C015	719	Serine/threonine-protein	no	N/A	0.966	0.121	0.689	2e-29
D4A280	718	Serine/threonine-protein	no	N/A	0.966	0.121	0.689	2e-29
Q9NQU5	681	Serine/threonine-protein	no	N/A	1.0	0.132	0.663	1e-28
Q5R8Z4	681	Serine/threonine-protein	no	N/A	1.0	0.132	0.663	1e-28
Q3ULB5	682	Serine/threonine-protein	no	N/A	1.0	0.131	0.619	2e-26
Q29502	524	Serine/threonine-protein	no	N/A	0.977	0.167	0.454	6e-15

>sp|Q9VXE5|PAKM_DROME Serine/threonine-protein kinase PAK mbt OS=Drosophila melanogaster GN=mbt PE=1 SV=2

 Score =  156 bits (394), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 74/87 (85%), Positives = 80/87 (91%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
           MV+EMVDGEPPFFNEPPLQAMRRIRDM PP LKN HKVSPRLQ FL+R+LVRDP QRATA
Sbjct: 551 MVIEMVDGEPPFFNEPPLQAMRRIRDMQPPNLKNAHKVSPRLQSFLDRMLVRDPAQRATA 610

Query: 61  AELLQHPFLRQAGPPALLVPLMKGSRH 87
           AELL HPFLRQAGPP+LLVPLM+ +RH
Sbjct: 611 AELLAHPFLRQAGPPSLLVPLMRNARH 637

Involved in neurogenesis of the adult central nervous system, and together with Cdc42, regulates photoreceptor cell morphogenesis. Phosphorylates exogenous substrates when activated by Cdc42.
Drosophila melanogaster (taxid: 7227)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|O96013|PAK4_HUMAN Serine/threonine-protein kinase PAK 4 OS=Homo sapiens GN=PAK4 PE=1 SV=1

 Score =  136 bits (342), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 65/86 (75%), Positives = 77/86 (89%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
           MV+EMVDGEPP+FNEPPL+AM+ IRD  PP+LKN HKVSP L+GFL+RLLVRDP QRATA
Sbjct: 504 MVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATA 563

Query: 61  AELLQHPFLRQAGPPALLVPLMKGSR 86
           AELL+HPFL +AGPPA +VPLM+ +R
Sbjct: 564 AELLKHPFLAKAGPPASIVPLMRQNR 589

Serine/threonine protein kinase that plays a role in a variety of different signaling pathways including cytoskeleton regulation, cell migration, growth, proliferation or cell survival. Activation by various effectors including growth factor receptors or active CDC42 and RAC1 results in a conformational change and a subsequent autophosphorylation on several serine and/or threonine residues. Phosphorylates and inactivates the protein phosphatase SSH1, leading to increased inhibitory phosphorylation of the actin binding/depolymerizing factor cofilin. Decreased cofilin activity may lead to stabilization of actin filaments. Phosphorylates LIMK1, a kinase that also inhibits the activity of cofilin. Phosphorylates integrin beta5/ITGB5 and thus regulates cell motility. Phosphorylates ARHGEF2 and activates the downstream target RHOA that plays a role in the regulation of assembly of focal adhesions and actin stress fibers. Stimulates cell survival by phosphorylating the BCL2 antagonist of cell death BAD. Alternatively, inhibits apoptosis by preventing caspase-8 binding to death domain receptors in a kinase independent manner. Plays a role in cell-cycle progression by controlling levels of the cell-cycle regulatory protein CDKN1A and by phosphorylating RAN.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q8BTW9|PAK4_MOUSE Serine/threonine-protein kinase PAK 4 OS=Mus musculus GN=Pak4 PE=1 SV=1

 Score =  134 bits (336), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 64/86 (74%), Positives = 75/86 (87%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
           MV+EMVDGEPP+FNEPPL+AM+ IRD  PP+LKN HK SP L+GFL+RLLVRDP QRATA
Sbjct: 506 MVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKASPSLKGFLDRLLVRDPAQRATA 565

Query: 61  AELLQHPFLRQAGPPALLVPLMKGSR 86
           AELL+HPFL +AGPPA +VPLM+  R
Sbjct: 566 AELLKHPFLTKAGPPASIVPLMRQHR 591

Serine/threonine protein kinase that plays a role in a variety of different signaling pathways including cytoskeleton regulation, cell migration, growth, proliferation or cell survival. Activation by various effectors including growth factor receptors or active CDC42 and RAC1 results in a conformational change and a subsequent autophosphorylation on several serine and/or threonine residues. Phosphorylates and inactivates the protein phosphatase SSH1, leading to increased inhibitory phosphorylation of the actin binding/depolymerizing factor cofilin. Decreased cofilin activity may lead to stabilization of actin filaments. Phosphorylates LIMK1, a kinase that also inhibits the activity of cofilin. Phosphorylates integrin beta5/ITGB5 and thus regulates cell motility. Phosphorylates ARHGEF2 and activates the downstream target RHOA that plays a role in the regulation of assembly of focal adhesions and actin stress fibers. Stimulates cell survival by phosphorylating the BCL2 antagonist of cell death BAD. Alternatively, inhibits apoptosis by preventing caspase-8 binding to death domain receptors in a kinase independent manner. Plays a role in cell-cycle progression by controlling levels of the cell-cycle regulatory protein CDKN1A and by phosphorylating RAN.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9P286|PAK7_HUMAN Serine/threonine-protein kinase PAK 7 OS=Homo sapiens GN=PAK7 PE=1 SV=1

 Score =  129 bits (325), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 60/87 (68%), Positives = 74/87 (85%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
           MV+EM+DGEPP+FNEPPLQAMRRIRD  PP++K+ HKVS  L+GFL+ +LVR+P QRATA
Sbjct: 632 MVIEMIDGEPPYFNEPPLQAMRRIRDSLPPRVKDLHKVSSVLRGFLDLMLVREPSQRATA 691

Query: 61  AELLQHPFLRQAGPPALLVPLMKGSRH 87
            ELL HPFL+ AGPP+ +VPLM+  RH
Sbjct: 692 QELLGHPFLKLAGPPSCIVPLMRQYRH 718

Serine/threonine protein kinase that plays a role in a variety of different signaling pathways including cytoskeleton regulation, cell migration, proliferation or cell survival. Activation by various effectors including growth factor receptors or active CDC42 and RAC1 results in a conformational change and a subsequent autophosphorylation on several serine and/or threonine residues. Phosphorylates the proto-oncogene RAF1 and stimulates its kinase activity. Promotes cell survival by phosphorylating the BCL2 antagonist of cell death BAD. Phosphorylates CTNND1, probably to regulate cytoskeletal organization and cell morphology. Keeps microtubules stable through MARK2 inhibition and destabilizes the F-actin network leading to the disappearance of stress fibers and focal adhesions.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q8C015|PAK7_MOUSE Serine/threonine-protein kinase PAK 7 OS=Mus musculus GN=Pak7 PE=1 SV=1

 Score =  127 bits (320), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 60/87 (68%), Positives = 74/87 (85%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
           MV+EM+DGEPP+FNEPPLQAMRRIRD  PP++K+ HKVS  L+GFL+ +LVR+P QRATA
Sbjct: 632 MVIEMIDGEPPYFNEPPLQAMRRIRDSLPPRVKDLHKVSSMLRGFLDLMLVREPSQRATA 691

Query: 61  AELLQHPFLRQAGPPALLVPLMKGSRH 87
            ELL HPFL+ AGPP+ +VPLM+  RH
Sbjct: 692 QELLGHPFLKLAGPPSCIVPLMRQYRH 718

Serine/threonine protein kinase that plays a role in a variety of different signaling pathways including cytoskeleton regulation, cell migration, proliferation or cell survival. Activation by various effectors including growth factor receptors or active CDC42 and RAC1 results in a conformational change and a subsequent autophosphorylation on several serine and/or threonine residues. Phosphorylates the proto-oncogene RAF1 and stimulates its kinase activity. Promotes cell survival by phosphorylating the BCL2 antagonist of cell death BAD. Phosphorylates CTNND1, probably to regulate cytoskeletal organization and cell morphology. Keeps microtubules stable through MARK2 inhibition and destabilizes the F-actin network leading to the disappearance of stress fibers and focal adhesions.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|D4A280|PAK7_RAT Serine/threonine-protein kinase PAK 7 OS=Rattus norvegicus GN=Pak7 PE=1 SV=1

 Score =  127 bits (319), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 60/87 (68%), Positives = 74/87 (85%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
           MV+EM+DGEPP+FNEPPLQAMRRIRD  PP++K+ HKVS  L+GFL+ +LVR+P QRATA
Sbjct: 631 MVIEMIDGEPPYFNEPPLQAMRRIRDSLPPRVKDLHKVSSMLRGFLDLMLVREPSQRATA 690

Query: 61  AELLQHPFLRQAGPPALLVPLMKGSRH 87
            ELL HPFL+ AGPP+ +VPLM+  RH
Sbjct: 691 QELLGHPFLKLAGPPSCIVPLMRQYRH 717

Serine/threonine protein kinase that plays a role in a variety of different signaling pathways including cytoskeleton regulation, cell migration, proliferation or cell survival. Activation by various effectors including growth factor receptors or active CDC42 and RAC1 results in a conformational change and a subsequent autophosphorylation on several serine and/or threonine residues. Phosphorylates the proto-oncogene RAF and stimulates its kinase activity. Promotes cell survival by phosphorylating the BCL2 antagonist of cell death BAD. Phosphorylates CTNND1, probably to regulate cytoskeletal organization and cell morphology. Keeps microtubules stable through MARK2 inhibition and destabilizes the F-actin network leading to the disappearance of stress fibers and focal adhesions.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9NQU5|PAK6_HUMAN Serine/threonine-protein kinase PAK 6 OS=Homo sapiens GN=PAK6 PE=1 SV=1

 Score =  124 bits (312), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 61/92 (66%), Positives = 74/92 (80%), Gaps = 2/92 (2%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
           MV+EMVDGEPP+F++ P+QAM+R+RD PPPKLKN+HKVSP L+ FLER+LVRDP +RATA
Sbjct: 590 MVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERATA 649

Query: 61  AELLQHPFLRQAGPPALLVPLMKGSRH--SNC 90
            ELL HPFL Q G P  LVPL++  R   S C
Sbjct: 650 QELLDHPFLLQTGLPECLVPLIQLYRKQTSTC 681

Serine/threonine protein kinase that plays a role in the regulation of gene transcription. The kinase activity is induced by various effectors including AR or MAP2K6/MAPKK6. Phosphorylates the DNA-binding domain of androgen receptor/AR and thereby inhibits AR-mediated transcription. Inhibits also ESR1-mediated transcription. May play a role in cytoskeleton regulation by interacting with IQGAP1. May protect cells from apoptosis through phosphorylation of BAD.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q5R8Z4|PAK6_PONAB Serine/threonine-protein kinase PAK 6 OS=Pongo abelii GN=PAK6 PE=2 SV=1

 Score =  124 bits (312), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 61/92 (66%), Positives = 74/92 (80%), Gaps = 2/92 (2%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
           MV+EMVDGEPP+F++ P+QAM+R+RD PPPKLKN+HKVSP L+ FLER+LVRDP +RATA
Sbjct: 590 MVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERATA 649

Query: 61  AELLQHPFLRQAGPPALLVPLMKGSRH--SNC 90
            ELL HPFL Q G P  LVPL++  R   S C
Sbjct: 650 QELLDHPFLLQTGLPECLVPLIQLYRKQTSTC 681

Serine/threonine protein kinase that plays a role in the regulation of gene transcription. The kinase activity is induced by various effectors including AR or MAP2K6/MAPKK6. Phosphorylates the DNA-binding domain of androgen receptor/AR and thereby inhibits AR-mediated transcription. Inhibits also ESR1-mediated transcription. May play a role in cytoskeleton regulation by interacting with IQGAP1. May protect cells from apoptosis through phosphorylation of BAD.

Pongo abelii (taxid: 9601)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q3ULB5|PAK6_MOUSE Serine/threonine-protein kinase PAK 6 OS=Mus musculus GN=Pak6 PE=2 SV=1

 Score =  117 bits (292), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 57/92 (61%), Positives = 73/92 (79%), Gaps = 2/92 (2%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
           MV+EMVDGEPP+F++ P+QAM+R+RD  PPKLKN++KVSP L+ FL+R+LVR+P +RATA
Sbjct: 591 MVIEMVDGEPPYFSDSPVQAMKRLRDSAPPKLKNSYKVSPVLRDFLDRMLVREPQERATA 650

Query: 61  AELLQHPFLRQAGPPALLVPLMKGSRH--SNC 90
            ELL HPFL Q G P  LVPL++  R   S C
Sbjct: 651 QELLDHPFLLQTGLPECLVPLIQLYRKQTSTC 682

Serine/threonine protein kinase that plays a role in the regulation of gene transcription. The kinase activity is induced by various effectors including AR or MAP2K6/MAPKK6. Phosphorylates the DNA-binding domain of androgen receptor/AR and thereby inhibits AR-mediated transcription. Inhibits also ESR1-mediated transcription. May play a role in cytoskeleton regulation by interacting with IQGAP1. May protect cells from apoptosis through phosphorylation of BAD.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q29502|PAK2_RABIT Serine/threonine-protein kinase PAK 2 OS=Oryctolagus cuniculus GN=PAK2 PE=1 SV=1

 Score = 79.3 bits (194), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 40/88 (45%), Positives = 57/88 (64%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
           M +EMV+GEPP+ NE PL+A+  I     P+L+N  K+SP  + FL R L  D  +R +A
Sbjct: 432 MAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSPIFRDFLNRCLEMDVEKRGSA 491

Query: 61  AELLQHPFLRQAGPPALLVPLMKGSRHS 88
            ELLQHPFL+ A P + L PL+  ++ +
Sbjct: 492 KELLQHPFLKLAKPLSSLTPLIMAAKEA 519

Serine/threonine protein kinase that plays a role in a variety of different signaling pathways including cytoskeleton regulation, cell motility, cell cycle progression, apoptosis or proliferation. Acts as downstream effector of the small GTPases CDC42 and RAC1. Activation by the binding of active CDC42 and RAC1 results in a conformational change and a subsequent autophosphorylation on several serine and/or threonine residues. Full-length PAK2 stimulates cell survival and cell growth. Phosphorylates MAPK4 and MAPK6 and activates the downstream target MAPKAPK5, a regulator of F-actin polymerization and cell migration. Phosphorylates JUN and plays an important role in EGF-induced cell proliferation. Phosphorylates many other substrates including histone H4 to promote assembly of H3.3 and H4 into nucleosomes, BAD, ribosomal protein S6, or MBP. Additionally, associates with ARHGEF7 and GIT1 to perform kinase-independent functions such as spindle orientation control during mitosis. On the other hand, apoptotic stimuli such as DNA damage lead to caspase-mediated cleavage of PAK2, generating PAK-2p34, an active p34 fragment that translocates to the nucleus and promotes cellular apoptosis involving the JNK signaling pathway. Caspase-activated PAK2 phosphorylates MKNK1 and reduces cellular translation.

Oryctolagus cuniculus (taxid: 9986)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	90
242015909	631	serine/threonine-protein kinase PAK mbt,	1.0	0.142	0.933	7e-43
193643513	596	PREDICTED: serine/threonine-protein kina	1.0	0.151	0.9	9e-42
380028748	674	PREDICTED: LOW QUALITY PROTEIN: serine/t	1.0	0.133	0.855	1e-41
328791563	673	PREDICTED: serine/threonine-protein kina	1.0	0.133	0.855	1e-41
350419135	675	PREDICTED: hypothetical protein LOC10074	1.0	0.133	0.855	2e-41
340708844	675	PREDICTED: serine/threonine-protein kina	1.0	0.133	0.855	2e-41
383865136	674	PREDICTED: serine/threonine-protein kina	1.0	0.133	0.855	3e-41
312380987	931	hypothetical protein AND_06788 [Anophele	1.0	0.096	0.866	4e-41
307192500	673	Serine/threonine-protein kinase PAK mbt	1.0	0.133	0.844	5e-41
157117354	537	P21-activated kinase, pak [Aedes aegypti	1.0	0.167	0.866	8e-41

>gi|242015909|ref|XP_002428585.1| serine/threonine-protein kinase PAK mbt, putative [Pediculus humanus corporis] gi|212513229|gb|EEB15847.1| serine/threonine-protein kinase PAK mbt, putative [Pediculus humanus corporis]

 Score =  177 bits (449), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 84/90 (93%), Positives = 87/90 (96%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
           MV+EMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVS RLQGFLER+LVRD  QRATA
Sbjct: 542 MVIEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSLRLQGFLERMLVRDAAQRATA 601

Query: 61  AELLQHPFLRQAGPPALLVPLMKGSRHSNC 90
           +ELLQHPFLRQAGPPALLVPLMKGSRHSNC
Sbjct: 602 SELLQHPFLRQAGPPALLVPLMKGSRHSNC 631

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|193643513|ref|XP_001943927.1| PREDICTED: serine/threonine-protein kinase PAK 7-like [Acyrthosiphon pisum]

 Score =  174 bits (440), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 81/90 (90%), Positives = 88/90 (97%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
           MV+EMVDGEPPFFNEPPLQAMRRIRDMPPPKLKN++K+SPRLQGFLERLLVRDP QRATA
Sbjct: 507 MVIEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNSNKISPRLQGFLERLLVRDPAQRATA 566

Query: 61  AELLQHPFLRQAGPPALLVPLMKGSRHSNC 90
           AELLQHPFLR AGPP+LLVPL++GSRHSNC
Sbjct: 567 AELLQHPFLRLAGPPSLLVPLIRGSRHSNC 596

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380028748|ref|XP_003698051.1| PREDICTED: LOW QUALITY PROTEIN: serine/threonine-protein kinase PAK mbt-like [Apis florea]

 Score =  173 bits (439), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 77/90 (85%), Positives = 86/90 (95%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
           M++EMVDGEPPFFNEPPLQAMRRIRDMPPPKLKN+HKVSPRLQGFLER+LVRDP QRATA
Sbjct: 585 MIIEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNSHKVSPRLQGFLERMLVRDPAQRATA 644

Query: 61  AELLQHPFLRQAGPPALLVPLMKGSRHSNC 90
            ELLQHPFLRQA  P++L+PLM+GSRH+NC
Sbjct: 645 TELLQHPFLRQAQSPSILIPLMRGSRHTNC 674

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328791563|ref|XP_001122147.2| PREDICTED: serine/threonine-protein kinase PAK mbt [Apis mellifera]

 Score =  173 bits (438), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 77/90 (85%), Positives = 86/90 (95%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
           M++EMVDGEPPFFNEPPLQAMRRIRDMPPPKLKN+HKVSPRLQGFLER+LVRDP QRATA
Sbjct: 584 MIIEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNSHKVSPRLQGFLERMLVRDPAQRATA 643

Query: 61  AELLQHPFLRQAGPPALLVPLMKGSRHSNC 90
            ELLQHPFLRQA  P++L+PLM+GSRH+NC
Sbjct: 644 TELLQHPFLRQAQSPSILIPLMRGSRHTNC 673

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350419135|ref|XP_003492082.1| PREDICTED: hypothetical protein LOC100744101 [Bombus impatiens]

 Score =  172 bits (437), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 77/90 (85%), Positives = 86/90 (95%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
           M++EMVDGEPPFFNEPPLQAMRRIRDMPPPKLKN+HKVSPRLQGFLER+LVRDP QRATA
Sbjct: 586 MIIEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNSHKVSPRLQGFLERMLVRDPAQRATA 645

Query: 61  AELLQHPFLRQAGPPALLVPLMKGSRHSNC 90
            ELLQHPFLRQA  P++L+PLM+GSRH+NC
Sbjct: 646 TELLQHPFLRQAQSPSILIPLMRGSRHTNC 675

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340708844|ref|XP_003393029.1| PREDICTED: serine/threonine-protein kinase PAK 7-like [Bombus terrestris]

 Score =  172 bits (437), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 77/90 (85%), Positives = 86/90 (95%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
           M++EMVDGEPPFFNEPPLQAMRRIRDMPPPKLKN+HKVSPRLQGFLER+LVRDP QRATA
Sbjct: 586 MIIEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNSHKVSPRLQGFLERMLVRDPAQRATA 645

Query: 61  AELLQHPFLRQAGPPALLVPLMKGSRHSNC 90
            ELLQHPFLRQA  P++L+PLM+GSRH+NC
Sbjct: 646 TELLQHPFLRQAQSPSILIPLMRGSRHTNC 675

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383865136|ref|XP_003708031.1| PREDICTED: serine/threonine-protein kinase PAK 7-like [Megachile rotundata]

 Score =  172 bits (435), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 77/90 (85%), Positives = 86/90 (95%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
           M++EMVDGEPPFFNEPPLQAMRRIRDMPPPKLKN+HKVSPRLQGFLER+LVRDP QRATA
Sbjct: 585 MIIEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNSHKVSPRLQGFLERMLVRDPAQRATA 644

Query: 61  AELLQHPFLRQAGPPALLVPLMKGSRHSNC 90
            ELLQHPFLRQA  P++L+PLM+GSRH+NC
Sbjct: 645 TELLQHPFLRQAQSPSILIPLMRGSRHTNC 674

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312380987|gb|EFR26843.1| hypothetical protein AND_06788 [Anopheles darlingi]

 Score =  171 bits (434), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 78/90 (86%), Positives = 87/90 (96%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
           MV+EM+DGEPPFFNEPPLQAMRRIRDMPPPKLKN+HKVS RLQ FL+R+LVRDP+QRATA
Sbjct: 842 MVIEMIDGEPPFFNEPPLQAMRRIRDMPPPKLKNSHKVSSRLQNFLDRMLVRDPVQRATA 901

Query: 61  AELLQHPFLRQAGPPALLVPLMKGSRHSNC 90
           AELL HPFLRQAGPP+LLVPLM+G+RHSNC
Sbjct: 902 AELLAHPFLRQAGPPSLLVPLMRGARHSNC 931

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307192500|gb|EFN75688.1| Serine/threonine-protein kinase PAK mbt [Harpegnathos saltator]

 Score =  171 bits (433), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 76/90 (84%), Positives = 87/90 (96%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
           M++EM+DGEPPFFNEPPLQAMRRIRDMPPPKLKN+HKVSPRLQGFLER+LVRDP QRATA
Sbjct: 584 MIIEMIDGEPPFFNEPPLQAMRRIRDMPPPKLKNSHKVSPRLQGFLERMLVRDPAQRATA 643

Query: 61  AELLQHPFLRQAGPPALLVPLMKGSRHSNC 90
           AELLQHPFLRQA  P++L+PLM+G+RH+NC
Sbjct: 644 AELLQHPFLRQAQSPSILIPLMRGARHTNC 673

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157117354|ref|XP_001658726.1| P21-activated kinase, pak [Aedes aegypti] gi|108876092|gb|EAT40317.1| AAEL007931-PA [Aedes aegypti]

 Score =  171 bits (432), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 78/90 (86%), Positives = 87/90 (96%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
           MV+EM+DGEPPFFNEPPLQAMRRIRDMPPPKLKN+HKVS RLQ FL+R+LVRDP+QRATA
Sbjct: 448 MVIEMIDGEPPFFNEPPLQAMRRIRDMPPPKLKNSHKVSSRLQNFLDRMLVRDPVQRATA 507

Query: 61  AELLQHPFLRQAGPPALLVPLMKGSRHSNC 90
           AELL HPFLRQAGPP+LLVPLM+G+RHSNC
Sbjct: 508 AELLAHPFLRQAGPPSLLVPLMRGARHSNC 537

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	90
FB|FBgn0025743	639	mbt "mushroom bodies tiny" [Dr	0.966	0.136	0.850	1.1e-36
UNIPROTKB|I3LSG7	401	I3LSG7 "Uncharacterized protei	0.955	0.214	0.755	6e-32
UNIPROTKB|H9L0H2	400	PAK4 "Uncharacterized protein"	0.955	0.215	0.732	2e-31
UNIPROTKB|O96013	591	PAK4 "Serine/threonine-protein	0.955	0.145	0.755	2.1e-31
UNIPROTKB|I3LF79	591	PAK4 "Uncharacterized protein"	0.955	0.145	0.755	2.1e-31
UNIPROTKB|G5E5G9	592	PAK4 "Uncharacterized protein"	0.955	0.145	0.755	2.1e-31
UNIPROTKB|E2RE16	592	PAK4 "Uncharacterized protein"	0.955	0.145	0.755	2.1e-31
RGD|1307705	593	Pak4 "p21 protein (Cdc42/Rac)-	0.966	0.146	0.735	7.6e-31
MGI|MGI:1917834	593	Pak4 "p21 protein (Cdc42/Rac)-	0.955	0.145	0.744	9.8e-31
ZFIN|ZDB-GENE-040704-69	664	pak4 "p21 protein (Cdc42/Rac)-	0.955	0.129	0.732	2e-30

FB|FBgn0025743 mbt "mushroom bodies tiny" [Drosophila melanogaster (taxid:7227)]

 Score = 399 (145.5 bits), Expect = 1.1e-36, P = 1.1e-36
 Identities = 74/87 (85%), Positives = 80/87 (91%)

Query:     1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
             MV+EMVDGEPPFFNEPPLQAMRRIRDM PP LKN HKVSPRLQ FL+R+LVRDP QRATA
Sbjct:   551 MVIEMVDGEPPFFNEPPLQAMRRIRDMQPPNLKNAHKVSPRLQSFLDRMLVRDPAQRATA 610

Query:    61 AELLQHPFLRQAGPPALLVPLMKGSRH 87
             AELL HPFLRQAGPP+LLVPLM+ +RH
Sbjct:   611 AELLAHPFLRQAGPPSLLVPLMRNARH 637

GO:0016319 "mushroom body development" evidence=IMP

GO:0004674 "protein serine/threonine kinase activity" evidence=ISS;IMP;NAS

GO:0006468 "protein phosphorylation" evidence=IMP;NAS

GO:0004702 "receptor signaling protein serine/threonine kinase activity" evidence=NAS

GO:0007010 "cytoskeleton organization" evidence=TAS

GO:0000187 "activation of MAPK activity" evidence=TAS

GO:0005912 "adherens junction" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005524 "ATP binding" evidence=IMP

GO:0045315 "positive regulation of compound eye photoreceptor development" evidence=IMP

GO:0001751 "compound eye photoreceptor cell differentiation" evidence=IMP

GO:0005913 "cell-cell adherens junction" evidence=IDA

GO:0048749 "compound eye development" evidence=IMP

GO:0004672 "protein kinase activity" evidence=IDA

GO:0046331 "lateral inhibition" evidence=IMP

GO:0007030 "Golgi organization" evidence=IMP

GO:0045792 "negative regulation of cell size" evidence=IMP

UNIPROTKB|I3LSG7 I3LSG7 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 350 (128.3 bits), Expect = 6.0e-32, P = 6.0e-32
 Identities = 65/86 (75%), Positives = 77/86 (89%)

Query:     1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
             MV+EMVDGEPP+FNEPPL+AM+ IRD  PP+LKN HKVSP L+GFL+RLLVRDP QRATA
Sbjct:   314 MVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATA 373

Query:    61 AELLQHPFLRQAGPPALLVPLMKGSR 86
             AELL+HPFL +AGPPA +VPLM+ +R
Sbjct:   374 AELLKHPFLAKAGPPASIVPLMRQNR 399

GO:0005524 "ATP binding" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

UNIPROTKB|H9L0H2 PAK4 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 345 (126.5 bits), Expect = 2.0e-31, P = 2.0e-31
 Identities = 63/86 (73%), Positives = 77/86 (89%)

Query:     1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
             MV+EMVDGEPP+FNEPPL+AM+ IRD  PPKLKN HKVSP L+GFL+R+LVRDP+QRATA
Sbjct:   313 MVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNVHKVSPSLKGFLDRMLVRDPVQRATA 372

Query:    61 AELLQHPFLRQAGPPALLVPLMKGSR 86
              ELL+HPFL +AGPP+ +VPLM+ +R
Sbjct:   373 NELLKHPFLGKAGPPSCIVPLMRQNR 398

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|O96013 PAK4 "Serine/threonine-protein kinase PAK 4" [Homo sapiens (taxid:9606)]

 Score = 350 (128.3 bits), Expect = 2.1e-31, P = 2.1e-31
 Identities = 65/86 (75%), Positives = 77/86 (89%)

Query:     1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
             MV+EMVDGEPP+FNEPPL+AM+ IRD  PP+LKN HKVSP L+GFL+RLLVRDP QRATA
Sbjct:   504 MVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATA 563

Query:    61 AELLQHPFLRQAGPPALLVPLMKGSR 86
             AELL+HPFL +AGPPA +VPLM+ +R
Sbjct:   564 AELLKHPFLAKAGPPASIVPLMRQNR 589

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0007049 "cell cycle" evidence=IEA

GO:0006915 "apoptotic process" evidence=TAS

GO:0016049 "cell growth" evidence=TAS

GO:0008283 "cell proliferation" evidence=TAS

GO:0016477 "cell migration" evidence=TAS

GO:0007010 "cytoskeleton organization" evidence=TAS

GO:0007165 "signal transduction" evidence=TAS

GO:0005794 "Golgi apparatus" evidence=TAS

GO:0006928 "cellular component movement" evidence=TAS

GO:0004672 "protein kinase activity" evidence=NAS

UNIPROTKB|I3LF79 PAK4 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 350 (128.3 bits), Expect = 2.1e-31, P = 2.1e-31
 Identities = 65/86 (75%), Positives = 77/86 (89%)

Query:     1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
             MV+EMVDGEPP+FNEPPL+AM+ IRD  PP+LKN HKVSP L+GFL+RLLVRDP QRATA
Sbjct:   504 MVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATA 563

Query:    61 AELLQHPFLRQAGPPALLVPLMKGSR 86
             AELL+HPFL +AGPPA +VPLM+ +R
Sbjct:   564 AELLKHPFLAKAGPPASIVPLMRQNR 589

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

UNIPROTKB|G5E5G9 PAK4 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 350 (128.3 bits), Expect = 2.1e-31, P = 2.1e-31
 Identities = 65/86 (75%), Positives = 77/86 (89%)

Query:     1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
             MV+EMVDGEPP+FNEPPL+AM+ IRD  PP+LKN HKVSP L+GFL+RLLVRDP QRATA
Sbjct:   505 MVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATA 564

Query:    61 AELLQHPFLRQAGPPALLVPLMKGSR 86
             AELL+HPFL +AGPPA +VPLM+ +R
Sbjct:   565 AELLKHPFLAKAGPPASIVPLMRQNR 590

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

UNIPROTKB|E2RE16 PAK4 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 350 (128.3 bits), Expect = 2.1e-31, P = 2.1e-31
 Identities = 65/86 (75%), Positives = 77/86 (89%)

Query:     1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
             MV+EMVDGEPP+FNEPPL+AM+ IRD  PP+LKN HKVSP L+GFL+RLLVRDP QRATA
Sbjct:   505 MVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATA 564

Query:    61 AELLQHPFLRQAGPPALLVPLMKGSR 86
             AELL+HPFL +AGPPA +VPLM+ +R
Sbjct:   565 AELLKHPFLAKAGPPASIVPLMRQNR 590

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

RGD|1307705 Pak4 "p21 protein (Cdc42/Rac)-activated kinase 4" [Rattus norvegicus (taxid:10116)]

 Score = 345 (126.5 bits), Expect = 7.6e-31, P = 7.6e-31
 Identities = 64/87 (73%), Positives = 76/87 (87%)

Query:     1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
             MV+EMVDGEPP+FNEPPL+AM+ IRD  PP+LKN HK SP L+GFL+RLLVRDP QRATA
Sbjct:   506 MVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKASPSLKGFLDRLLVRDPAQRATA 565

Query:    61 AELLQHPFLRQAGPPALLVPLMKGSRH 87
             AELL+HPFL +AGPPA +VPLM+  R+
Sbjct:   566 AELLKHPFLTKAGPPASIVPLMRQHRN 592

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

MGI|MGI:1917834 Pak4 "p21 protein (Cdc42/Rac)-activated kinase 4" [Mus musculus (taxid:10090)]

 Score = 344 (126.2 bits), Expect = 9.8e-31, P = 9.8e-31
 Identities = 64/86 (74%), Positives = 75/86 (87%)

Query:     1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
             MV+EMVDGEPP+FNEPPL+AM+ IRD  PP+LKN HK SP L+GFL+RLLVRDP QRATA
Sbjct:   506 MVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKASPSLKGFLDRLLVRDPAQRATA 565

Query:    61 AELLQHPFLRQAGPPALLVPLMKGSR 86
             AELL+HPFL +AGPPA +VPLM+  R
Sbjct:   566 AELLKHPFLTKAGPPASIVPLMRQHR 591

GO:0000166 "nucleotide binding" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0006915 "apoptotic process" evidence=IEA

GO:0007049 "cell cycle" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

ZFIN|ZDB-GENE-040704-69 pak4 "p21 protein (Cdc42/Rac)-activated kinase 4" [Danio rerio (taxid:7955)]

 Score = 343 (125.8 bits), Expect = 2.0e-30, P = 2.0e-30
 Identities = 63/86 (73%), Positives = 76/86 (88%)

Query:     1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
             MV+EMVDGEPP+FNEPPL+AM+ IRD  PPKLKN HKVSP L+GFL+R+LVRDP QRATA
Sbjct:   577 MVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNLHKVSPLLKGFLDRMLVRDPAQRATA 636

Query:    61 AELLQHPFLRQAGPPALLVPLMKGSR 86
              ELL+HPFL +AGPP+ +VPLM+ +R
Sbjct:   637 QELLKHPFLTKAGPPSCIVPLMRQNR 662

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0016740 "transferase activity" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8BTW9	PAK4_MOUSE	2, ., 7, ., 1, 1, ., 1	0.7441	0.9555	0.1450	yes	N/A
Q9VXE5	PAKM_DROME	2, ., 7, ., 1, 1, ., 1	0.8505	0.9666	0.1361	yes	N/A
O96013	PAK4_HUMAN	2, ., 7, ., 1, 1, ., 1	0.7558	0.9555	0.1455	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	90
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	2e-50
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	2e-41
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	2e-38
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	5e-38
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	2e-34
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	3e-24
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	1e-22
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	3e-21
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	1e-19
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	1e-18
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	5e-18
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	7e-18
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	1e-17
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	3e-17
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	1e-16
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	3e-16
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	5e-15
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	1e-14
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	1e-13
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	3e-13
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	3e-12
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	1e-11
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	1e-10
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	1e-10
cd06639	291	cd06639, STKc_myosinIIIB, Catalytic domain of the	2e-10
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	3e-10
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	4e-10
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	7e-10
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	9e-10
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	2e-09
cd06638	286	cd06638, STKc_myosinIIIA, Catalytic domain of the	2e-09
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	2e-09
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	3e-09
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	6e-09
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	9e-09
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	2e-08
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	2e-08
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	3e-08
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	5e-08
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	7e-08
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	1e-07
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	1e-07
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	1e-07
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	2e-07
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	3e-07
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	4e-07
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	5e-07
smart00750	176	smart00750, KIND, kinase non-catalytic C-lobe doma	6e-07
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	8e-07
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	9e-07
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	9e-07
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	1e-06
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	1e-06
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	1e-06
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	1e-06
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	2e-06
cd05610	669	cd05610, STKc_MASTL, Catalytic domain of the Prote	6e-06
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	6e-06
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	8e-06
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	2e-05
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	2e-05
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	3e-05
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	3e-05
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	3e-05
cd08216	314	cd08216, PK_STRAD, Pseudokinase domain of STE20-re	4e-05
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	8e-05
cd05574	316	cd05574, STKc_phototropin_like, Catalytic domain o	1e-04
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	2e-04
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	3e-04
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	3e-04
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	3e-04
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	5e-04
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	6e-04
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	6e-04
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	7e-04
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	7e-04
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	7e-04
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	8e-04
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	8e-04
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	0.001
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	0.001
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	0.001
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	0.001
cd07853	372	cd07853, STKc_NLK, Catalytic domain of the Serine/	0.002
cd08227	327	cd08227, PK_STRAD_alpha, Pseudokinase domain of ST	0.002
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	0.002
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	0.002
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	0.002
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	0.002
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	0.003
cd06650	333	cd06650, PKc_MEK1, Catalytic domain of the dual-sp	0.004
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	0.004
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	0.004

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score =  159 bits (405), Expect = 2e-50
 Identities = 65/82 (79%), Positives = 74/82 (90%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
           MV+EMVDGEPP+FNEPPLQAM+RIRD  PPKLKN HKVSPRL+ FL+R+LVRDP QRATA
Sbjct: 204 MVIEMVDGEPPYFNEPPLQAMKRIRDNLPPKLKNLHKVSPRLRSFLDRMLVRDPAQRATA 263

Query: 61  AELLQHPFLRQAGPPALLVPLM 82
           AELL HPFL +AGPP+ +VPLM
Sbjct: 264 AELLNHPFLAKAGPPSSIVPLM 285

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score =  136 bits (343), Expect = 2e-41
 Identities = 65/86 (75%), Positives = 77/86 (89%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
           MV+EMVDGEPP+FNEPPL+AM+ IRD  PPKLKN HKVSP L+GFL+RLLVRDP QRATA
Sbjct: 205 MVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNLHKVSPSLKGFLDRLLVRDPAQRATA 264

Query: 61  AELLQHPFLRQAGPPALLVPLMKGSR 86
           AELL+HPFL +AGPP+ +VPLM+ +R
Sbjct: 265 AELLKHPFLAKAGPPSCIVPLMRQNR 290

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score =  129 bits (325), Expect = 2e-38
 Identities = 60/86 (69%), Positives = 75/86 (87%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
           MV+EM+DGEPP+FNEPPLQAMRRIRD  PP++K++HKVS  L+GFL+ +LVR+P QRATA
Sbjct: 207 MVIEMIDGEPPYFNEPPLQAMRRIRDNLPPRVKDSHKVSSVLRGFLDLMLVREPSQRATA 266

Query: 61  AELLQHPFLRQAGPPALLVPLMKGSR 86
            ELLQHPFL+ AGPP+ +VPLM+  R
Sbjct: 267 QELLQHPFLKLAGPPSCIVPLMRQYR 292

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score =  128 bits (322), Expect = 5e-38
 Identities = 56/86 (65%), Positives = 70/86 (81%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
           MV+EMVDGEPP+F++ P+QAM+R+RD PPPKLKN HK+SP L+ FLER+L R+P +RATA
Sbjct: 206 MVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNAHKISPVLRDFLERMLTREPQERATA 265

Query: 61  AELLQHPFLRQAGPPALLVPLMKGSR 86
            ELL HPFL Q G P  LVPL++  R
Sbjct: 266 QELLDHPFLLQTGLPECLVPLIQQYR 291

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score =  118 bits (298), Expect = 2e-34
 Identities = 40/82 (48%), Positives = 53/82 (64%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
           M +EM +GEPP+  EPPL+A+  I     P LKN  K SP  + FL + LV+DP +R +A
Sbjct: 205 MCIEMAEGEPPYLREPPLRALFLITTKGIPPLKNPEKWSPEFKDFLNKCLVKDPEKRPSA 264

Query: 61  AELLQHPFLRQAGPPALLVPLM 82
            ELLQHPFL++A P     PL+
Sbjct: 265 EELLQHPFLKKACPKEEFAPLI 286

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 91.1 bits (227), Expect = 3e-24
 Identities = 26/68 (38%), Positives = 44/68 (64%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
             +E+ +G+PP+   PP++A+ +I    PP L+N  K S   + FL++ L ++P +R TA
Sbjct: 186 TAIELAEGKPPYSELPPMKALFKIATNGPPGLRNPEKWSDEFKDFLKKCLQKNPEKRPTA 245

Query: 61  AELLQHPF 68
            +LL+HPF
Sbjct: 246 EQLLKHPF 253

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 87.3 bits (217), Expect = 1e-22
 Identities = 28/67 (41%), Positives = 46/67 (68%)

Query: 3   VEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAE 62
           +EM +G+PP+ +  P++A+  I + PPP L +  K SP    F+++ LV+DP +R +A +
Sbjct: 190 IEMAEGKPPYSDIHPMRAIFMIPNKPPPTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQ 249

Query: 63  LLQHPFL 69
           LLQHPF+
Sbjct: 250 LLQHPFI 256

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 84.2 bits (208), Expect = 3e-21
 Identities = 39/88 (44%), Positives = 56/88 (63%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
           M +EMV+GEPP+ NE PL+A+  I     P+L+N  K+S   + FL R L  D  +R +A
Sbjct: 204 MAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSA 263

Query: 61  AELLQHPFLRQAGPPALLVPLMKGSRHS 88
            ELLQHPFL+ A P + L PL+  ++ +
Sbjct: 264 KELLQHPFLKIAKPLSSLTPLIAAAKEA 291

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 80.2 bits (197), Expect = 1e-19
 Identities = 40/88 (45%), Positives = 57/88 (64%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
           M +EMV+GEPP+ NE PL+A+  I     P+L+N  K+SP  + FL R L  D  +R +A
Sbjct: 204 MAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSPIFRDFLNRCLEMDVEKRGSA 263

Query: 61  AELLQHPFLRQAGPPALLVPLMKGSRHS 88
            ELLQHPFL+ A P + L PL+  ++ +
Sbjct: 264 KELLQHPFLKLAKPLSSLTPLILAAKEA 291

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 77.1 bits (189), Expect = 1e-18
 Identities = 38/88 (43%), Positives = 56/88 (63%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
           M +EMV+GEPP+ NE PL+A+  I     P+L+N  ++S   + FL R L  D  +R +A
Sbjct: 204 MAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGSA 263

Query: 61  AELLQHPFLRQAGPPALLVPLMKGSRHS 88
            ELLQHPFL+ A P + L PL+  ++ +
Sbjct: 264 KELLQHPFLKLAKPLSSLTPLIIAAKEA 291

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 75.0 bits (185), Expect = 5e-18
 Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 1/80 (1%)

Query: 4   EMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAEL 63
           E+  GEPP  +  P++ +  I    PP L+  +K S   + F+   L +DP +R +A EL
Sbjct: 190 ELAKGEPPLSDLHPMRVLFLIPKNNPPSLEG-NKFSKPFKDFVSLCLNKDPKERPSAKEL 248

Query: 64  LQHPFLRQAGPPALLVPLMK 83
           L+H F+++A   + L  L++
Sbjct: 249 LKHKFIKKAKKTSYLTLLIE 268

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 75.1 bits (184), Expect = 7e-18
 Identities = 37/88 (42%), Positives = 55/88 (62%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
           M +EM++GEPP+ NE PL+A+  I     P+L+N  K+S   + FL R L  D  +R +A
Sbjct: 205 MAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSA 264

Query: 61  AELLQHPFLRQAGPPALLVPLMKGSRHS 88
            ELLQH FL+ A P + L PL+  ++ +
Sbjct: 265 KELLQHQFLKIAKPLSSLTPLIAAAKEA 292

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 74.1 bits (183), Expect = 1e-17
 Identities = 29/71 (40%), Positives = 41/71 (57%), Gaps = 4/71 (5%)

Query: 1   MVVEMVDGEPPFFN-EPPLQAMRRI-RDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRA 58
            V+EM  G+PP+     P+ A+ +I     PP++     +S   + FL + L RDP +R 
Sbjct: 192 TVIEMATGKPPWSELGNPMAALYKIGSSGEPPEIPEH--LSEEAKDFLRKCLRRDPKKRP 249

Query: 59  TAAELLQHPFL 69
           TA ELLQHPFL
Sbjct: 250 TADELLQHPFL 260

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 73.1 bits (180), Expect = 3e-17
 Identities = 24/67 (35%), Positives = 40/67 (59%)

Query: 3   VEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAE 62
           +E+ DG+PP  +  P++A+ +I   PPP LK+    S +   F+   L+++  QR    E
Sbjct: 209 IELADGKPPLCDMHPMRALFKIPRNPPPTLKSPENWSKKFNDFISECLIKNYEQRPFMEE 268

Query: 63  LLQHPFL 69
           LL+HPF+
Sbjct: 269 LLEHPFI 275

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 71.6 bits (176), Expect = 1e-16
 Identities = 29/68 (42%), Positives = 45/68 (66%), Gaps = 2/68 (2%)

Query: 3   VEMVDGEPPFFNEPPLQAMRRI--RDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
           +E+ + +PP F+  P++A+  I   + PPPKLK+  K SP    F+++ L +DP +R TA
Sbjct: 195 IELAELQPPMFDLHPMRALFLISKSNFPPPKLKDKEKWSPVFHDFIKKCLTKDPKKRPTA 254

Query: 61  AELLQHPF 68
            +LLQHPF
Sbjct: 255 TKLLQHPF 262

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 70.3 bits (173), Expect = 3e-16
 Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 1/70 (1%)

Query: 1   MVVEMVDGEPPFFNEPPLQAM-RRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRAT 59
           ++ E++ G+PPF  +  L  + ++I    PP       +SP  +  + +LLV+DP +R T
Sbjct: 185 ILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWDISPEAKDLIRKLLVKDPEKRLT 244

Query: 60  AAELLQHPFL 69
           A E LQHPF 
Sbjct: 245 AEEALQHPFF 254

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 66.9 bits (164), Expect = 5e-15
 Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 8/71 (11%)

Query: 2   VVEMVDGEPPFFNEPPLQAMRRI---RDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRA 58
           V+E++ G PP+++  P+ A+ RI      P P+      +SP L+ FL +   +DP  R 
Sbjct: 189 VIELLTGNPPYYDLNPMAALFRIVQDDHPPLPE-----GISPELKDFLMQCFQKDPNLRP 243

Query: 59  TAAELLQHPFL 69
           TA +LL+HP++
Sbjct: 244 TAKQLLKHPWI 254

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 66.1 bits (162), Expect = 1e-14
 Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 4/73 (5%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLK----NTHKVSPRLQGFLERLLVRDPLQ 56
           ++ E++ G+PPF  E  L  ++ IR +  P L+         S   +  +++ L +DP +
Sbjct: 188 ILYELLTGKPPFSGENILDQLQLIRRILGPPLEFDEPKWSSGSEEAKDLIKKCLNKDPSK 247

Query: 57  RATAAELLQHPFL 69
           R TA E+LQHP+ 
Sbjct: 248 RPTAEEILQHPWF 260

Length = 260

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 63.2 bits (154), Expect = 1e-13
 Identities = 27/71 (38%), Positives = 37/71 (52%)

Query: 3   VEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAE 62
           +E+   EPP     P++ + +I    PP L    K S     FL+  LV+DP  R TAAE
Sbjct: 199 IELAQMEPPHHELNPMRVLLKILKSEPPTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAE 258

Query: 63  LLQHPFLRQAG 73
           LL+HPF+    
Sbjct: 259 LLKHPFVSDQS 269

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 62.4 bits (152), Expect = 3e-13
 Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 1/69 (1%)

Query: 2   VVEMVDGEPPF-FNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
           V+EM  G+ P+   +   Q M  +     P + ++ ++SP  + FL+R L  DP +R TA
Sbjct: 196 VLEMATGKRPWSELDNEFQIMFHVGAGHKPPIPDSLQLSPEGKDFLDRCLESDPKKRPTA 255

Query: 61  AELLQHPFL 69
           +ELLQHPF+
Sbjct: 256 SELLQHPFV 264

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 59.6 bits (145), Expect = 3e-12
 Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 6/76 (7%)

Query: 1   MVVEMVDGEPPFFNEP-----PLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPL 55
            ++E+  G  P+  E        + ++ I + PPP+L +  K SP  Q F+   L++DP 
Sbjct: 188 SLIELATGRFPYPPENDPPDGIFELLQYIVNEPPPRLPS-GKFSPDFQDFVNLCLIKDPR 246

Query: 56  QRATAAELLQHPFLRQ 71
           +R +  ELL+HPF+++
Sbjct: 247 ERPSYKELLEHPFIKK 262

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 58.0 bits (141), Expect = 1e-11
 Identities = 31/77 (40%), Positives = 43/77 (55%), Gaps = 8/77 (10%)

Query: 1   MVVEMVDGEPPFFNEPPLQA-----MRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPL 55
            ++E   G+ PF   PP Q      M+ I D PPP L      SP  + F+   L +DP 
Sbjct: 189 TLLECALGKFPFL--PPGQPSFFELMQAICDGPPPSLPAEEF-SPEFRDFISACLQKDPK 245

Query: 56  QRATAAELLQHPFLRQA 72
           +R +AAELLQHPF+++A
Sbjct: 246 KRPSAAELLQHPFIKKA 262

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 55.1 bits (133), Expect = 1e-10
 Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
            + EM  G PP+ +    +AM  I    PP+L++    S  L+ F+   L  +P +R +A
Sbjct: 191 TIYEMATGNPPYSDVDAFRAMMLIPKSKPPRLEDNG-YSKLLREFVAACLDEEPKERLSA 249

Query: 61  AELLQHPFLRQ 71
            ELL+  +++ 
Sbjct: 250 EELLKSKWIKA 260

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 55.1 bits (133), Expect = 1e-10
 Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 9/72 (12%)

Query: 2   VVEMVDGEPPFFNEPPLQAMRRI---RDMPP-PKLKNTHKVSPRLQGFLERLLVRDPLQR 57
           V+EM  G+PP+     + A+ +I   +++PP P       +S   + F+ + L RDP  R
Sbjct: 192 VLEMATGKPPWSQLEGVAAVFKIGRSKELPPIPD-----HLSDEAKDFILKCLQRDPSLR 246

Query: 58  ATAAELLQHPFL 69
            TAAELL+HPF+
Sbjct: 247 PTAAELLEHPFV 258

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

 Score = 54.6 bits (131), Expect = 2e-10
 Identities = 22/68 (32%), Positives = 39/68 (57%)

Query: 3   VEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAE 62
           +E+ DG+PP F+  P++ + +I   PPP L +  K       F+ + L++D   R +   
Sbjct: 224 IELGDGDPPLFDMHPVKTLFKIPRNPPPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTH 283

Query: 63  LLQHPFLR 70
           LL+HPF++
Sbjct: 284 LLEHPFIK 291

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 54.3 bits (131), Expect = 3e-10
 Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 3/69 (4%)

Query: 3   VEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNT---HKVSPRLQGFLERLLVRDPLQRAT 59
           +E+  G  P+   PP++ +       PP L+      K S   +  +   L +DP +R T
Sbjct: 198 IELATGAAPYSKYPPMKVLMLTLQNDPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPT 257

Query: 60  AAELLQHPF 68
           A ELL+H F
Sbjct: 258 AEELLKHKF 266

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 53.9 bits (129), Expect = 4e-10
 Identities = 27/67 (40%), Positives = 42/67 (62%), Gaps = 1/67 (1%)

Query: 3   VEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAE 62
           +EM +G PP  +  P++A+  I   PPPKLK + K S +   F+E  LV++ L R +  +
Sbjct: 217 IEMAEGAPPLCDMHPMRALFLIPRNPPPKLK-SKKWSKKFIDFIEGCLVKNYLSRPSTEQ 275

Query: 63  LLQHPFL 69
           LL+HPF+
Sbjct: 276 LLKHPFI 282

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 52.9 bits (128), Expect = 7e-10
 Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 10/73 (13%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDMPP--PKLKNTHKVSPRLQGFLERLLVRDPLQR- 57
           ++ EM+ G+PPF+ E   +   +I   P   P+      +SP  +  +  LL +DP +R 
Sbjct: 182 LLYEMLTGKPPFYAEDRKEIYEKILKDPLRFPE-----FLSPEARDLISGLLQKDPTKRL 236

Query: 58  --ATAAELLQHPF 68
               A E+  HPF
Sbjct: 237 GSGGAEEIKAHPF 249

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 52.8 bits (126), Expect = 9e-10
 Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 1/67 (1%)

Query: 3   VEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAE 62
           +EM +G PP  +  P++A+  I   P P+LK + K S + Q F+E  LV++  QR T  +
Sbjct: 207 IEMAEGAPPLCDMHPMRALFLIPRNPAPRLK-SKKWSKKFQSFIESCLVKNHSQRPTTEQ 265

Query: 63  LLQHPFL 69
           L++HPF+
Sbjct: 266 LMKHPFI 272

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 52.0 bits (124), Expect = 2e-09
 Identities = 24/70 (34%), Positives = 37/70 (52%)

Query: 2   VVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAA 61
           ++EM   EPP     P++ + +I    PP L    K S   + FL+  L + P  R +AA
Sbjct: 205 LIEMAQIEPPHHELNPMRVLLKIAKSEPPTLSQPSKWSMEFRDFLKTALDKHPETRPSAA 264

Query: 62  ELLQHPFLRQ 71
           +LL+HPF+  
Sbjct: 265 QLLEHPFVSS 274

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

 Score = 51.9 bits (124), Expect = 2e-09
 Identities = 23/67 (34%), Positives = 38/67 (56%)

Query: 3   VEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAE 62
           +E+ DG+PP  +  P++A+ +I   PPP L      S     F+ + L +D  +R T ++
Sbjct: 220 IELGDGDPPLADLHPMRALFKIPRNPPPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSD 279

Query: 63  LLQHPFL 69
           LLQH F+
Sbjct: 280 LLQHVFI 286

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 51.6 bits (123), Expect = 2e-09
 Identities = 25/68 (36%), Positives = 42/68 (61%), Gaps = 2/68 (2%)

Query: 3   VEMVDGEPPFFNEPPLQAMRRI--RDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
           +E+ + +PP F+  P++A+  +   +  PPKLK+  K S     F++  L ++P +R TA
Sbjct: 200 IELAELQPPMFDLHPMRALFLMTKSNFQPPKLKDKMKWSNSFHHFVKMALTKNPKKRPTA 259

Query: 61  AELLQHPF 68
            +LLQHPF
Sbjct: 260 EKLLQHPF 267

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 51.3 bits (123), Expect = 3e-09
 Identities = 22/84 (26%), Positives = 45/84 (53%), Gaps = 1/84 (1%)

Query: 3   VEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAE 62
           +E+ + +PP FN   + A+  I     P L +    S   + F++  L + P  R ++ E
Sbjct: 205 IELAERKPPLFNMNAMSALYHIAQNDSPTLSSND-WSDYFRNFVDSCLQKIPQDRPSSEE 263

Query: 63  LLQHPFLRQAGPPALLVPLMKGSR 86
           LL+H F+ +  PP +++ L++ ++
Sbjct: 264 LLKHRFVLRERPPTVIIDLIQRTK 287

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 50.4 bits (120), Expect = 6e-09
 Identities = 24/84 (28%), Positives = 50/84 (59%), Gaps = 1/84 (1%)

Query: 3   VEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAE 62
           +E+ + +PP FN   + A+  I     P L+ +++ +   +GF++  L + P +R  +AE
Sbjct: 211 IELAERKPPLFNMNAMSALYHIAQNDSPTLQ-SNEWTDSFRGFVDYCLQKIPQERPASAE 269

Query: 63  LLQHPFLRQAGPPALLVPLMKGSR 86
           LL+H F+R+  P  +L+ L++ ++
Sbjct: 270 LLRHDFVRRDRPARVLIDLIQRTK 293

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 50.1 bits (120), Expect = 9e-09
 Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 1/70 (1%)

Query: 2   VVEMVDGEPPFFN-EPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
           +VE+  G+ P+ N +   + + +I    PP L      SP    F++  L +D  +R   
Sbjct: 208 LVELATGQFPYKNCKTEFEVLTKILQEEPPSLPPNEGFSPDFCSFVDLCLTKDHRKRPKY 267

Query: 61  AELLQHPFLR 70
            ELLQHPF+R
Sbjct: 268 RELLQHPFIR 277

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 49.2 bits (117), Expect = 2e-08
 Identities = 22/68 (32%), Positives = 36/68 (52%)

Query: 2   VVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAA 61
           ++EM   EPP     P++ + +I    PP L    + S   + FL++ L ++   R T  
Sbjct: 198 LIEMAQIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSEFKDFLKKCLEKNVDARWTTT 257

Query: 62  ELLQHPFL 69
           +LLQHPF+
Sbjct: 258 QLLQHPFV 265

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 49.0 bits (117), Expect = 2e-08
 Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 3/71 (4%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRI---RDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQR 57
           +V+EM  G  P+ +E  + AM ++   R  PP     +  +SP    FL      +P  R
Sbjct: 201 VVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNR 260

Query: 58  ATAAELLQHPF 68
            TA ELLQHPF
Sbjct: 261 PTARELLQHPF 271

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 48.4 bits (116), Expect = 3e-08
 Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 8/74 (10%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRI--RDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRA 58
           ++ E + G PPF  E P +  + I    +  P+      VS      + +LLV DP +R 
Sbjct: 190 ILYEFLVGIPPFHGETPEEIFQNILNGKIEWPEDVE---VSDEAIDLISKLLVPDPEKRL 246

Query: 59  TAA---ELLQHPFL 69
            A    E+  HPF 
Sbjct: 247 GAKSIEEIKNHPFF 260

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 48.1 bits (114), Expect = 5e-08
 Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 2/68 (2%)

Query: 3   VEMVDGEPPFFNEPPLQAMRRIR--DMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
           +E+ + +PP F+  P++A+  +   +  PPKLK+  K S     F++  L ++P +R TA
Sbjct: 200 IELAELQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWSSTFHNFVKISLTKNPKKRPTA 259

Query: 61  AELLQHPF 68
             LL H F
Sbjct: 260 ERLLTHLF 267

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 47.5 bits (113), Expect = 7e-08
 Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 3/68 (4%)

Query: 2   VVEMVDGEPPFFNEPPLQAMRRIRDMPP-PKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
           VVEM+  +PP+     + A+ +I   P  P+L +   VSP  + FL R  V +  +R +A
Sbjct: 197 VVEMLTEKPPWAEFEAMAAIFKIATQPTNPQLPS--HVSPDARNFLRRTFVENAKKRPSA 254

Query: 61  AELLQHPF 68
            ELL+H F
Sbjct: 255 EELLRHFF 262

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 47.0 bits (111), Expect = 1e-07
 Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 3/82 (3%)

Query: 3   VEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAE 62
           +E+  GEPP  +  P++ +  I    PP L+  +  S   + F+E  L +DP  R TA E
Sbjct: 192 IELAKGEPPNSDLHPMRVLFLIPKNSPPTLEGQY--SKPFKEFVEACLNKDPRFRPTAKE 249

Query: 63  LLQHPFL-RQAGPPALLVPLMK 83
           LL+H F+ R     + L  L+ 
Sbjct: 250 LLKHKFITRYTKKTSFLTELID 271

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 46.6 bits (110), Expect = 1e-07
 Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 2/67 (2%)

Query: 3   VEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAE 62
           +E+  GEPP  +  P++ +  I    PP L  T + S   + F++  L +DP  R TA E
Sbjct: 192 IELAKGEPPNSDMHPMRVLFLIPKNNPPTL--TGEFSKPFKEFIDACLNKDPSFRPTAKE 249

Query: 63  LLQHPFL 69
           LL+H F+
Sbjct: 250 LLKHKFI 256

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 46.8 bits (112), Expect = 1e-07
 Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 7/72 (9%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
           ++ +M+ G+PPF         ++I  +   +        P  +  +E+LLV DP  R   
Sbjct: 211 IIYQMLTGKPPFRGSNEYLTFQKILKL---EYSFPPNFPPDAKDLIEKLLVLDPQDRLGV 267

Query: 61  ----AELLQHPF 68
                EL  HPF
Sbjct: 268 NEGYDELKAHPF 279

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 46.3 bits (110), Expect = 2e-07
 Identities = 23/67 (34%), Positives = 40/67 (59%), Gaps = 7/67 (10%)

Query: 7   DGEPPFFNEPPLQAMRRIRDMPPPKLK----NTHKVSPRLQGFLERLLVRDPLQRATAAE 62
           +GEPP     P++ +  I +MP P+LK    N  K S   + F+++ L +DP +R T  +
Sbjct: 206 EGEPPL---GPIELLSYIVNMPNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWD 262

Query: 63  LLQHPFL 69
           +L+HP++
Sbjct: 263 MLEHPWI 269

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 45.5 bits (108), Expect = 3e-07
 Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 2/72 (2%)

Query: 2   VVEMVDGEPPFFN-EPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
           ++E+  G  P+ + + P Q ++++ + P P+L    K SP  Q F+ + L ++  +R   
Sbjct: 197 MIELATGRFPYDSWKTPFQQLKQVVEEPSPQLPA-EKFSPEFQDFVNKCLKKNYKERPNY 255

Query: 61  AELLQHPFLRQA 72
            ELLQHPF    
Sbjct: 256 PELLQHPFFELH 267

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 45.2 bits (108), Expect = 4e-07
 Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 2/66 (3%)

Query: 4   EMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAEL 63
           E+   + PF  E  L+   +I     P + + +  S  L+  +  LL +DP +R + A++
Sbjct: 195 ELCTLKHPFEGENLLELALKILKGQYPPIPSQY--SSELRNLVSSLLQKDPEERPSIAQI 252

Query: 64  LQHPFL 69
           LQ PF+
Sbjct: 253 LQSPFI 258

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 45.2 bits (107), Expect = 5e-07
 Identities = 27/69 (39%), Positives = 40/69 (57%), Gaps = 2/69 (2%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
           +VVEM+ G+ PF +   LQA+ +I +   P++ +          FLE+    D  +R TA
Sbjct: 201 LVVEMLTGKHPFPDCTQLQAIFKIGENASPEIPSNISSEAI--DFLEKTFEIDHNKRPTA 258

Query: 61  AELLQHPFL 69
           AELL+HPFL
Sbjct: 259 AELLKHPFL 267

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|214801 smart00750, KIND, kinase non-catalytic C-lobe domain

 Score = 44.3 bits (105), Expect = 6e-07
 Identities = 22/84 (26%), Positives = 29/84 (34%), Gaps = 7/84 (8%)

Query: 1   MVVEMVDGEPPFFNEPPLQA--MRRIRDMP---PPKLKNTHKVS--PRLQGFLERLLVRD 53
            + E +D E P+  E  L A     +  MP   P    N   VS     + F+     R 
Sbjct: 93  TLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLEGVSAARSFEDFMRLCASRL 152

Query: 54  PLQRATAAELLQHPFLRQAGPPAL 77
           P +R  A   L H     A    L
Sbjct: 153 PQRREAANHYLAHCRALFAETLEL 176

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features. Length = 176

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 44.7 bits (106), Expect = 8e-07
 Identities = 19/49 (38%), Positives = 31/49 (63%), Gaps = 1/49 (2%)

Query: 24  IRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQA 72
           I + PPPKL +    S   Q F+++ L ++P +RA   EL +HPF+++A
Sbjct: 246 IVNEPPPKLPSGA-FSDEFQDFVDKCLKKNPKERADLKELTKHPFIKRA 293

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 44.5 bits (106), Expect = 9e-07
 Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 8/75 (10%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQR--- 57
           ++ EM+ G PPFF++ P+Q   +I +    K++     SP  +  +  LL  D  +R   
Sbjct: 187 LIYEMLAGYPPFFDDNPIQIYEKILE---GKVRFPSFFSPDAKDLIRNLLQVDLTKRLGN 243

Query: 58  --ATAAELLQHPFLR 70
                 ++  HP+  
Sbjct: 244 LKNGVNDIKNHPWFA 258

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 44.4 bits (106), Expect = 9e-07
 Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 4/57 (7%)

Query: 19  QAMRRIRDMPPPKLKNTHKVSPRL--QG--FLERLLVRDPLQRATAAELLQHPFLRQ 71
           +A   ++ +P    K   K+ P    +    LE++LV DP +R TA E L HP+L Q
Sbjct: 238 KARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQ 294

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 44.2 bits (105), Expect = 1e-06
 Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 4/52 (7%)

Query: 24  IRDMPPPKLKNTHKV----SPRLQGFLERLLVRDPLQRATAAELLQHPFLRQ 71
           I+ +P    K+  +V    +P     LE++LV DP +R TAAE L HP+L +
Sbjct: 252 IQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAE 303

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 44.3 bits (104), Expect = 1e-06
 Identities = 23/84 (27%), Positives = 46/84 (54%), Gaps = 1/84 (1%)

Query: 3   VEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAE 62
           +E+ + +PP FN   + A+  I     P L++  + S   + F++  L + P  R T+ E
Sbjct: 215 IELAERKPPLFNMNAMSALYHIAQNESPTLQSN-EWSDYFRNFVDSCLQKIPQDRPTSEE 273

Query: 63  LLQHPFLRQAGPPALLVPLMKGSR 86
           LL+H F+ +  P  +L+ L++ ++
Sbjct: 274 LLKHMFVLRERPETVLIDLIQRTK 297

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 44.3 bits (104), Expect = 1e-06
 Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 3/81 (3%)

Query: 3   VEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAE 62
           +E+  GEPP     P++ +  I    PP L+  +  S  L+ F+E  L ++P  R TA E
Sbjct: 192 IELAKGEPPHSELHPMKVLFLIPKNNPPTLEGNY--SKPLKEFVEACLNKEPSFRPTAKE 249

Query: 63  LLQHPF-LRQAGPPALLVPLM 82
           LL+H F +R A   + L  L+
Sbjct: 250 LLKHKFIVRFAKKTSYLTELI 270

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 43.7 bits (103), Expect = 1e-06
 Identities = 22/68 (32%), Positives = 30/68 (44%)

Query: 2   VVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAA 61
           V EM  G+PP  +   L AM  I        +     S     F+   L RD  +R +A 
Sbjct: 198 VFEMATGKPPLASMDRLAAMFYIGAHRGLMPRLPDSFSAAAIDFVTSCLTRDQHERPSAL 257

Query: 62  ELLQHPFL 69
           +LL+H FL
Sbjct: 258 QLLRHDFL 265

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 43.6 bits (101), Expect = 2e-06
 Identities = 19/82 (23%), Positives = 31/82 (37%), Gaps = 10/82 (12%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDM----------PPPKLKNTHKVSPRLQGFLERLL 50
            + E++ G PPF  E    A  +   +           P    N   +S      L++LL
Sbjct: 200 TLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASPLSPSNPELISKAASDLLKKLL 259

Query: 51  VRDPLQRATAAELLQHPFLRQA 72
            +DP  R +++  L H  L   
Sbjct: 260 AKDPKNRLSSSSDLSHDLLAHL 281

Length = 384

>gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

 Score = 42.2 bits (99), Expect = 6e-06
 Identities = 28/67 (41%), Positives = 36/67 (53%), Gaps = 4/67 (5%)

Query: 4   EMVDGEPPFFNEPPLQAMRRI--RDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAA 61
           E + G PPF +E P Q  + I  RD+P P+     K+S   Q  +E LL  DP +RA   
Sbjct: 572 EFLTGIPPFNDETPQQVFQNILNRDIPWPE--GEEKLSVNAQNAIEILLTMDPTKRAGLK 629

Query: 62  ELLQHPF 68
           EL QHP 
Sbjct: 630 ELKQHPL 636

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 42.0 bits (99), Expect = 6e-06
 Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 5/73 (6%)

Query: 3   VEMVDGEPPF--FNEPPLQAMRRIRDMPPPKLKNTHK--VSPRLQGFLERLLVRDPLQRA 58
            E+  G+ P+  +N      + ++    PP L N+ +   SP    F+   L++D  +R 
Sbjct: 201 YEVATGKFPYPKWN-SVFDQLTQVVKGDPPILSNSEEREFSPSFVNFINLCLIKDESKRP 259

Query: 59  TAAELLQHPFLRQ 71
              ELL+HPF++ 
Sbjct: 260 KYKELLEHPFIKD 272

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 41.7 bits (98), Expect = 8e-06
 Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 10/73 (13%)

Query: 2   VVEMVDGEPPFFN-EPPLQAMRRI---RDMPP-PKLKNTHKVSPRLQGFLERLLVRDPLQ 56
           +VEM  G+PPF     P  AM ++   +  P  P+      +S   + F+ R    DP +
Sbjct: 201 IVEMATGKPPFIELGEPQAAMFKVGMFKIHPEIPE-----SLSAEAKNFILRCFEPDPDK 255

Query: 57  RATAAELLQHPFL 69
           RA+A +LLQ PFL
Sbjct: 256 RASAHDLLQDPFL 268

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 40.8 bits (96), Expect = 2e-05
 Identities = 25/95 (26%), Positives = 35/95 (36%), Gaps = 29/95 (30%)

Query: 4   EMVDGEPPFFNEPPLQAMRRIRDM-----------------------PPPKLKNT----- 35
           E++DGEP F  +  +  +  I+                         P P    +     
Sbjct: 194 ELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRY 253

Query: 36  -HKVSPRLQGFLERLLVRDPLQRATAAELLQHPFL 69
             KVS     FL+  L  DP +R T  ELLQHP+ 
Sbjct: 254 PGKVSSPALDFLKACLRMDPKERLTCDELLQHPYF 288

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 40.6 bits (95), Expect = 2e-05
 Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 17/83 (20%)

Query: 2   VVEMVDGEPPFFNEPP---------LQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVR 52
           ++EM  G  P+   PP         L A   I D  PP L + +  S   Q F+ + L +
Sbjct: 197 ILEMALGRYPY---PPETYANIFAQLSA---IVDGDPPTLPSGY--SDDAQDFVAKCLNK 248

Query: 53  DPLQRATAAELLQHPFLRQAGPP 75
            P +R T A+LL+HP+L +    
Sbjct: 249 IPNRRPTYAQLLEHPWLVKYKNA 271

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 40.4 bits (94), Expect = 3e-05
 Identities = 23/84 (27%), Positives = 46/84 (54%), Gaps = 1/84 (1%)

Query: 3   VEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAE 62
           +E+ + +PP FN   + A+  I     P L++ H  S   + F++  L + P  R T+  
Sbjct: 205 IELAERKPPLFNMNAMSALYHIAQNESPALQSGH-WSEYFRNFVDSCLQKIPQDRPTSEV 263

Query: 63  LLQHPFLRQAGPPALLVPLMKGSR 86
           LL+H F+ +  PP +++ L++ ++
Sbjct: 264 LLKHRFVLRERPPTVIMDLIQRTK 287

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 40.3 bits (95), Expect = 3e-05
 Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 4/52 (7%)

Query: 24  IRDMPPPKLKNTHKVSPRLQG----FLERLLVRDPLQRATAAELLQHPFLRQ 71
           +  +P    K   ++ P+        L++LLV +P +R TA E L+HP++ Q
Sbjct: 249 LDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQ 300

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 40.0 bits (94), Expect = 3e-05
 Identities = 28/96 (29%), Positives = 40/96 (41%), Gaps = 23/96 (23%)

Query: 4   EMVDGEPPFFNEPPLQAMRRIRD------MPPPKLKNTHKVSPRLQGFLERLLVRDPLQR 57
           EM+ G PPF+++   +   +I +       PP        VSP     + RLL  DP  R
Sbjct: 222 EMLYGFPPFYSDTLQETYNKIINWKESLRFPP-----DPPVSPEAIDLICRLL-CDPEDR 275

Query: 58  ATAAE-LLQHPF--------LRQAGPPALLVPLMKG 84
             + E +  HPF        LR+  PP   VP +  
Sbjct: 276 LGSFEEIKSHPFFKGIDWENLRETKPP--FVPELSS 309

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|173756 cd08216, PK_STRAD, Pseudokinase domain of STE20-related kinase adapter protein

 Score = 39.6 bits (93), Expect = 4e-05
 Identities = 15/37 (40%), Positives = 20/37 (54%)

Query: 35  THKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQ 71
           T   S     F+E  L RDP  R +A++LL H F +Q
Sbjct: 264 TRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQ 300

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha stabilized through ATP and MO25 may be needed to activate LKB1. Length = 314

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 39.0 bits (91), Expect = 8e-05
 Identities = 23/75 (30%), Positives = 32/75 (42%), Gaps = 6/75 (8%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRI--RDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRA 58
           ++ E + G PPF  E P      I  R +  P+       SP     + RLL  DP +R 
Sbjct: 182 VIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVKEF-CSPEAVDLINRLLCMDPAKRL 240

Query: 59  TA---AELLQHPFLR 70
            A    E+  HPF +
Sbjct: 241 GANGYQEIKSHPFFK 255

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

 Score = 38.4 bits (90), Expect = 1e-04
 Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 5/71 (7%)

Query: 4   EMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQR----AT 59
           EM+ G  PF      +    I          +  VS   +  + +LLV+DP +R      
Sbjct: 224 EMLYGTTPFKGSNRDETFSNILK-KEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRG 282

Query: 60  AAELLQHPFLR 70
           AAE+ QHPF R
Sbjct: 283 AAEIKQHPFFR 293

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 8/62 (12%)

Query: 9   EPPFFNE--PPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQH 66
           + P+F    P     RR+R+      K  H + P     L++LL  DP +R +A + LQH
Sbjct: 231 KLPWFENLKPKKPYKRRLRE----FFK--HLIDPSALDLLDKLLTLDPKKRISADQALQH 284

Query: 67  PF 68
            +
Sbjct: 285 EY 286

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 37.6 bits (88), Expect = 3e-04
 Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 2/66 (3%)

Query: 4   EMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAEL 63
           E+    PPF     LQ   +I++    ++   ++ S  L   ++ +L  DP +R +  EL
Sbjct: 202 ELCALSPPFTARNQLQLASKIKEGKFRRIP--YRYSSELNEVIKSMLNVDPDKRPSTEEL 259

Query: 64  LQHPFL 69
           LQ P +
Sbjct: 260 LQLPLI 265

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 37.5 bits (88), Expect = 3e-04
 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 4/48 (8%)

Query: 26  DMPPPKLKNTHKVSPRLQG----FLERLLVRDPLQRATAAELLQHPFL 69
             P    K+  KV PRL       L ++L  +P +R +A E L+HP+ 
Sbjct: 235 TFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF 282

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 37.2 bits (86), Expect = 3e-04
 Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 1/55 (1%)

Query: 17  PLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQ 71
           PLQ ++ I D  PP L    + S +   F+ + + + P +R     L+ HPF+ Q
Sbjct: 205 PLQLLQCIVDEDPPVLP-VGQFSEKFVHFITQCMRKQPKERPAPENLMDHPFIVQ 258

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 36.8 bits (86), Expect = 5e-04
 Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 1/50 (2%)

Query: 27  MPPPKLKNTHK-VSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPP 75
            PP  LK      S      L+RLL  +P +R TA + L+HP+      P
Sbjct: 242 FPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFSNDPAP 291

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score = 36.5 bits (84), Expect = 6e-04
 Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 6/74 (8%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQR--- 57
           ++ EM+ G PPF++E   +  R+I   P   L+         +  L  LL RDP +R   
Sbjct: 182 LLYEMLTGLPPFYDENVNEMYRKILQEP---LRFPDGFDRDAKDLLIGLLSRDPTRRLGY 238

Query: 58  ATAAELLQHPFLRQ 71
             A E+  HPF  Q
Sbjct: 239 NGAQEIKNHPFFSQ 252

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 36.3 bits (84), Expect = 6e-04
 Identities = 26/94 (27%), Positives = 38/94 (40%), Gaps = 28/94 (29%)

Query: 4   EMVDGEPPFFNEPPLQAMRRIRDM---PPPKLKNT------------------------- 35
           EM++G+P F  +  +     I D+   PP  + NT                         
Sbjct: 198 EMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKF 257

Query: 36  HKVSPRLQGFLERLLVRDPLQRATAAELLQHPFL 69
               P     LE++LV DP +R +AAE L HP+L
Sbjct: 258 KNADPSAIDLLEKMLVFDPQKRISAAEALAHPYL 291

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score = 36.1 bits (84), Expect = 7e-04
 Identities = 12/35 (34%), Positives = 19/35 (54%)

Query: 37  KVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQ 71
              P+    L+++L  +P +R T  E L HP+L Q
Sbjct: 263 NADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQ 297

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 36.1 bits (84), Expect = 7e-04
 Identities = 10/28 (35%), Positives = 19/28 (67%)

Query: 40  PRLQGFLERLLVRDPLQRATAAELLQHP 67
           P L+  + ++L +DP +R +A E+L+H 
Sbjct: 188 PELKDLIRKMLQKDPEKRPSAKEILEHL 215

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 36.3 bits (84), Expect = 7e-04
 Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 1/55 (1%)

Query: 18  LQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQA 72
           L  +++I   PPP+L ++      L+ F++  L++DP +R T  +L   P   QA
Sbjct: 219 LDLLQQIVQEPPPRLPSS-DFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQA 272

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 36.3 bits (84), Expect = 8e-04
 Identities = 15/39 (38%), Positives = 23/39 (58%)

Query: 38  VSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPPA 76
            S   + F+   L R+P +R +A +LLQHPF+ +A P  
Sbjct: 300 ASREFRHFISCCLQREPAKRWSAMQLLQHPFILRAQPGQ 338

Length = 353

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score = 36.2 bits (84), Expect = 8e-04
 Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 6/62 (9%)

Query: 12  FFNEPPLQAMRRIRDMPP-PKLKNTHK---VSPRLQGFLERLLVRDPLQRATAAELLQHP 67
           F      +A R IR +P  P+          +P     LE++LV DP +R T  E L HP
Sbjct: 235 FIRNE--KARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHP 292

Query: 68  FL 69
           +L
Sbjct: 293 YL 294

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score = 35.7 bits (82), Expect = 0.001
 Identities = 14/34 (41%), Positives = 19/34 (55%)

Query: 38  VSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQ 71
            +P     LE++LV D   R TAAE L HP+  +
Sbjct: 270 ANPLAVNVLEKMLVLDAESRITAAEALAHPYFEE 303

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 35.6 bits (83), Expect = 0.001
 Identities = 12/32 (37%), Positives = 19/32 (59%)

Query: 38  VSPRLQGFLERLLVRDPLQRATAAELLQHPFL 69
            SP     ++ +L  DP +R TA++ LQHP+ 
Sbjct: 252 ASPEAIDLIKDMLRWDPKKRPTASQALQHPYF 283

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 35.4 bits (82), Expect = 0.001
 Identities = 16/35 (45%), Positives = 20/35 (57%)

Query: 37  KVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQ 71
           K SP     L ++L  DP +R T  + LQHPFL Q
Sbjct: 265 KASPEALDLLSQMLQFDPEERITVEQALQHPFLAQ 299

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score = 35.5 bits (82), Expect = 0.001
 Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 4/54 (7%)

Query: 18  LQAMRRIRDMP-PPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLR 70
           L +MR+ + +P   K  N   ++ RL   LERLL  DP  R TA E L  P+ +
Sbjct: 244 LSSMRKKQPVPFSQKFPNADPLALRL---LERLLAFDPKDRPTAEEALADPYFK 294

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

 Score = 35.1 bits (81), Expect = 0.002
 Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 14/70 (20%)

Query: 16  PPLQAMRRIRD--------MP--PPKLKNTHKVSPRLQ----GFLERLLVRDPLQRATAA 61
           P L+AMR   +         P  PP L   + +S +        L R+LV DP +R +AA
Sbjct: 224 PSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAA 283

Query: 62  ELLQHPFLRQ 71
           + L HP+L +
Sbjct: 284 DALAHPYLDE 293

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372

>gnl|CDD|173767 cd08227, PK_STRAD_alpha, Pseudokinase domain of STE20-related kinase adapter protein alpha

 Score = 35.3 bits (81), Expect = 0.002
 Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 6/48 (12%)

Query: 39  SPRLQGFLERLLVRDPLQRATAAELLQHPFLRQ------AGPPALLVP 80
           SP    F+E+ L R+P  R +A+ LL H F +Q         P LL P
Sbjct: 280 SPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIKRRASEALPELLRP 327

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha, stabilized through ATP and MO25, may be needed to activate LKB1. A mutation which results in a truncation of a C-terminal part of the human STRAD-alpha pseudokinase domain and disrupts its association with LKB1, leads to PMSE (polyhydramnios, megalencephaly, symptomatic epilepsy) syndrome. Several splice variants of STRAD-alpha exist which exhibit different effects on the localization and activation of LKB1. Length = 327

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 35.4 bits (81), Expect = 0.002
 Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 2/67 (2%)

Query: 2   VVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAA 61
           VVEM+  +PP+     + A+ +I   P      +H +S   + FL  + V +   R +A 
Sbjct: 199 VVEMLTEKPPWAEYEAMAAIFKIATQPTNPQLPSH-ISEHARDFLGCIFV-EARHRPSAE 256

Query: 62  ELLQHPF 68
           ELL+HPF
Sbjct: 257 ELLRHPF 263

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 35.1 bits (81), Expect = 0.002
 Identities = 24/96 (25%), Positives = 38/96 (39%), Gaps = 28/96 (29%)

Query: 1   MVVEMVDGEPPF--------------------------FNEPPLQAMRRIRDM--PPPKL 32
           +V EM+ GEP F                          F + PL A  R+ ++    P  
Sbjct: 190 LVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLE 249

Query: 33  KNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPF 68
           K   K+S  +    ++ L  DP  R ++++LL H F
Sbjct: 250 KRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEF 285

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 34.9 bits (80), Expect = 0.002
 Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 2/66 (3%)

Query: 4   EMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAEL 63
           EM      F  +  L  + RI + P P L  T+  S +L   ++ +L +DP  R +AAE+
Sbjct: 197 EMCCLAHAFEGQNFLSVVLRIVEGPTPSLPETY--SRQLNSIMQSMLNKDPSLRPSAAEI 254

Query: 64  LQHPFL 69
           L++PF+
Sbjct: 255 LRNPFI 260

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 34.6 bits (80), Expect = 0.002
 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)

Query: 26  DMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFL 69
            MP PKL      SP+    L ++L  DP +R TA + L HP+ 
Sbjct: 242 GMPLPKL--FPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF 283

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 34.4 bits (79), Expect = 0.003
 Identities = 21/79 (26%), Positives = 34/79 (43%), Gaps = 12/79 (15%)

Query: 1   MVVEMVDGEPPFFNEPPL----QAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQ 56
            + EM+ G  PF          +  RR  +M    ++   K SP  +   E LL +DP +
Sbjct: 183 TLYEMIAGRSPFRQRKEKVEKEELKRRTLEMA---VEYPDKFSPEAKDLCEALLQKDPEK 239

Query: 57  R-----ATAAELLQHPFLR 70
           R      +A E+ +HP  +
Sbjct: 240 RLGCRGGSADEVREHPLFK 258

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

 Score = 34.2 bits (78), Expect = 0.004
 Identities = 17/62 (27%), Positives = 35/62 (56%), Gaps = 4/62 (6%)

Query: 14  NEPPL---QAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLR 70
           + PP+   + +  I + PPPKL +        Q F+ + L+++P +RA   +L+ H F++
Sbjct: 245 SRPPMAIFELLDYIVNEPPPKLPSG-VFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIK 303

Query: 71  QA 72
           ++
Sbjct: 304 RS 305

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score = 34.0 bits (78), Expect = 0.004
 Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 17/65 (26%)

Query: 11  PFFN--EPPLQAMRRIRD----MPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELL 64
           P+FN  +P  Q  RR+R+    +P P L             L+ +L  DP +R TA E L
Sbjct: 249 PYFNTMKPKKQYRRRLREEFSFIPTPALD-----------LLDHMLTLDPSKRCTAEEAL 297

Query: 65  QHPFL 69
             P+L
Sbjct: 298 NSPWL 302

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score = 34.0 bits (78), Expect = 0.004
 Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 8/77 (10%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
           ++ E + G PPFF++ P +   +I      +LK  +    R +  ++ LL  D  +R   
Sbjct: 204 LLYEFIAGYPPFFDDTPFRIYEKILA---GRLKFPNWFDGRARDLVKGLLQTDHTKRLGT 260

Query: 61  -----AELLQHPFLRQA 72
                A++  HP+   A
Sbjct: 261 LKGGVADVKNHPYFHGA 277

Length = 329

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	90
KOG0578|consensus	550		99.62
KOG0615|consensus	475		99.6
KOG0033|consensus	355		99.58
KOG0575|consensus	592		99.56
KOG0588|consensus	786		99.55
KOG0592|consensus	604		99.53
KOG0581|consensus	364		99.53
KOG0610|consensus	459		99.49
KOG0605|consensus	550		99.48
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.47
KOG0694|consensus	694		99.46
KOG0201|consensus	467		99.45
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.42
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.42
KOG0198|consensus	313		99.41
KOG0583|consensus	370		99.41
KOG0579|consensus	1187		99.41
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.4
KOG0983|consensus	391		99.39
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.39
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.39
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.38
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.37
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.36
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.36
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.35
KOG0598|consensus	357		99.35
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.35
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.35
KOG0616|consensus	355		99.35
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.35
KOG0032|consensus	382		99.35
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.35
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.34
KOG4717|consensus	864		99.34
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.34
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.33
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.33
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.33
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.32
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.32
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.32
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.31
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.31
KOG0690|consensus	516		99.31
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.3
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.3
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.3
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.29
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.29
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.29
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.29
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.29
KOG0580|consensus	281		99.28
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.27
KOG0574|consensus	502		99.27
KOG0599|consensus	411		99.27
PTZ00036	440	glycogen synthase kinase; Provisional	99.27
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.27
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.26
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.26
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.26
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.25
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.25
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.25
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.24
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.24
KOG0597|consensus	808		99.24
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.24
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.24
PTZ00284	467	protein kinase; Provisional	99.24
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.24
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.23
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.22
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.22
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.22
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.22
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.22
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.22
KOG0585|consensus	576		99.21
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.21
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.21
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.2
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.2
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.2
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.2
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.2
KOG0660|consensus	359		99.2
KOG0582|consensus	516		99.2
KOG0604|consensus	400		99.19
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.19
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.19
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.19
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.19
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.18
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.18
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.18
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.18
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.18
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.18
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.18
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.18
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.18
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.17
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.17
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.17
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.17
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.17
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.17
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.17
KOG0696|consensus	683		99.17
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.16
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.16
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.16
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.16
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.16
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.16
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.16
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.16
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.16
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.16
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.15
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.15
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.15
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.15
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.15
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.14
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.14
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.14
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.14
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.13
KOG0603|consensus	612		99.13
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.13
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.13
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.13
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.13
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.13
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.12
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.12
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.12
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.12
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.12
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.12
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.11
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.11
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.11
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.1
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.1
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.1
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.1
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.1
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.1
KOG0593|consensus	396		99.1
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.1
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.1
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.09
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.09
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.09
PTZ00283	496	serine/threonine protein kinase; Provisional	99.09
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.09
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.08
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.08
KOG0596|consensus	677		99.08
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.07
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.07
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.06
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.06
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.06
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.06
PLN00009	294	cyclin-dependent kinase A; Provisional	99.06
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.06
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.06
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.06
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.06
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.05
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.05
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.05
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.05
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.04
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.04
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.04
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.03
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.03
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.03
PHA02988	283	hypothetical protein; Provisional	99.03
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.03
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.03
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.03
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.02
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.02
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.02
PTZ00267	478	NIMA-related protein kinase; Provisional	99.02
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.02
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.01
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.01
KOG4645|consensus	1509		99.01
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.01
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.01
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.0
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.0
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.0
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.0
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	98.99
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	98.99
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	98.98
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	98.98
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	98.98
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	98.98
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	98.97
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	98.96
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	98.96
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	98.96
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	98.96
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	98.95
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	98.95
KOG0586|consensus	596		98.95
KOG0577|consensus	948		98.95
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	98.95
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	98.95
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	98.94
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	98.93
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	98.93
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	98.93
PHA03207	392	serine/threonine kinase US3; Provisional	98.92
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	98.92
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	98.92
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	98.92
KOG0661|consensus	538		98.91
KOG0612|consensus	1317		98.9
KOG1006|consensus	361		98.9
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	98.89
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	98.88
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	98.88
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	98.88
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	98.88
KOG4279|consensus	1226		98.87
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	98.86
KOG0986|consensus	591		98.86
KOG0614|consensus	732		98.86
KOG0607|consensus	463		98.85
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	98.85
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	98.84
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	98.83
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	98.83
PTZ00266	1021	NIMA-related protein kinase; Provisional	98.82
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	98.81
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	98.81
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	98.81
KOG0658|consensus	364		98.8
PHA03211	461	serine/threonine kinase US3; Provisional	98.8
KOG0584|consensus	632		98.79
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	98.79
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	98.79
PHA03212	391	serine/threonine kinase US3; Provisional	98.78
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	98.78
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	98.77
KOG0587|consensus	953		98.77
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	98.76
KOG0659|consensus	318		98.76
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	98.75
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	98.74
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	98.73
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	98.73
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	98.72
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	98.72
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	98.72
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	98.72
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	98.71
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	98.71
KOG0667|consensus	586		98.7
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	98.7
KOG0197|consensus	468		98.7
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	98.69
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	98.68
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	98.68
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	98.67
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	98.66
KOG4236|consensus	888		98.66
KOG0611|consensus	668		98.66
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	98.66
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	98.66
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	98.66
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	98.65
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	98.63
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	98.63
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	98.62
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	98.62
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	98.61
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	98.61
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	98.61
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	98.61
KOG0589|consensus	426		98.61
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	98.61
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	98.61
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	98.6
KOG0663|consensus	419		98.6
KOG0192|consensus	362		98.6
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	98.59
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	98.59
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	98.59
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	98.59
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	98.58
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	98.58
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	98.58
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	98.58
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	98.57
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	98.57
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	98.57
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	98.57
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	98.57
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	98.56
KOG0600|consensus	560		98.56
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	98.56
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	98.55
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	98.55
PHA03209	357	serine/threonine kinase US3; Provisional	98.55
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	98.54
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	98.53
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	98.53
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	98.53
KOG4721|consensus	904		98.52
KOG1027|consensus	903		98.52
PHA03210	501	serine/threonine kinase US3; Provisional	98.52
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	98.52
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	98.52
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	98.51
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	98.49
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	98.49
KOG0608|consensus	1034		98.49
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	98.48
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	98.48
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	98.47
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	98.47
KOG0671|consensus	415		98.46
KOG0669|consensus	376		98.45
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	98.44
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	98.44
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	98.44
KOG0670|consensus	752		98.44
PLN03224	507	probable serine/threonine protein kinase; Provisio	98.43
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	98.42
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	98.42
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	98.4
KOG0695|consensus	593		98.4
KOG0594|consensus	323		98.39
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	98.39
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	98.38
KOG1151|consensus	775		98.37
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	98.37
KOG2345|consensus	302		98.36
KOG1026|consensus	774		98.35
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	98.33
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	98.3
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	98.3
KOG0591|consensus	375		98.28
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	98.28
KOG0665|consensus	369		98.27
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	98.26
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	98.25
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	98.24
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	98.24
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	98.24
KOG0199|consensus	1039		98.23
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	98.21
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	98.21
KOG1095|consensus	1025		98.19
PLN00181	793	protein SPA1-RELATED; Provisional	98.19
PHA02882	294	putative serine/threonine kinase; Provisional	98.17
KOG0193|consensus	678		98.15
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	98.14
KOG0595|consensus	429		98.12
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	98.1
KOG0200|consensus	609		98.09
KOG1024|consensus	563		98.08
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	98.07
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	98.06
KOG0576|consensus	829		98.05
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	98.04
KOG0662|consensus	292		98.03
KOG0606|consensus	1205		98.03
KOG4278|consensus	1157		98.0
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	97.92
KOG0590|consensus	601		97.91
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	97.89
KOG1167|consensus	418		97.82
KOG0196|consensus	996		97.82
KOG1290|consensus	590		97.8
KOG1989|consensus	738		97.75
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	97.66
KOG0603|consensus	612		97.65
KOG0606|consensus	1205		97.64
KOG0668|consensus	338		97.62
KOG1035|consensus	1351		97.53
KOG0194|consensus	474		97.51
KOG4257|consensus	974		97.5
KOG0666|consensus	438		97.38
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	97.11
KOG0195|consensus	448		97.06
KOG1025|consensus	1177		96.99
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	95.77
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	94.44
KOG1094|consensus	807		94.42
KOG4158|consensus	598		94.23
KOG1345|consensus	378		93.95
KOG1023|consensus	484		93.77
KOG0664|consensus	449		93.52
KOG0590|consensus	601		92.28
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	85.44
KOG1240|consensus	1431		82.51
KOG1266|consensus	458		82.22

>KOG0578|consensus

Probab=99.62  E-value=7.9e-16  Score=92.62  Aligned_cols=86  Identities=52%  Similarity=0.840  Sum_probs=78.8

Q ss_pred             EEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCCCcccHHH
Q psy10832          2 VVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPPALLVPL   81 (90)
Q Consensus         2 l~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~~~~~~~~   81 (90)
                      +.||+.|++||-.+++-..+..|...+.|.+..+..+|+.+++|+.+||..|+.+|+++.+||.||||......+.+.++
T Consensus       459 aIEMveGEPPYlnE~PlrAlyLIa~ng~P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~HpFl~~a~p~ssL~pL  538 (550)
T KOG0578|consen  459 AIEMVEGEPPYLNENPLRALYLIATNGTPKLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLEHPFLKMAKPESSLNPL  538 (550)
T ss_pred             HHHHhcCCCCccCCChHHHHHHHhhcCCCCcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhcChhhhhcCCHHHhHHH
Confidence            46899999999999999999999998888898899999999999999999999999999999999999988888888888


Q ss_pred             Hhhhhc
Q psy10832         82 MKGSRH   87 (90)
Q Consensus        82 ~~~~~~   87 (90)
                      +...++
T Consensus       539 i~~~~~  544 (550)
T KOG0578|consen  539 ILAARK  544 (550)
T ss_pred             HHHHHH
Confidence            776654

>KOG0615|consensus

Probab=99.60  E-value=1.6e-15  Score=89.08  Aligned_cols=73  Identities=25%  Similarity=0.353  Sum_probs=62.1

Q ss_pred             CEEeeecCCCCCCCCCHHH-HHHHhhcCCCC-CCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQ-AMRRIRDMPPP-KLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~-~~~~i~~~~~~-~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      ++|.+++|.+||.+..... ....|..+... .+..|..+++++.++|..||..||+.|+++.++|+||||+...
T Consensus       370 vLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~~  444 (475)
T KOG0615|consen  370 VLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNHPWFKDAP  444 (475)
T ss_pred             eEEEEeccCCCcccccCCccHHHHHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhccc
Confidence            5899999999999876554 77778877653 2355678999999999999999999999999999999999655

>KOG0033|consensus

Probab=99.58  E-value=2.3e-15  Score=84.01  Aligned_cols=71  Identities=25%  Similarity=0.486  Sum_probs=62.6

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCC-CCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPP-KLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQ   71 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~   71 (90)
                      |||.++.|.+||-+++..++...|..+... ..+.|..+++++++++++||..||.+|.++.+.++|||+..
T Consensus       201 iLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~~  272 (355)
T KOG0033|consen  201 ILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALKHPWICN  272 (355)
T ss_pred             HHHHHHhCCCCCCCccHHHHHHHHhccccCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhCCchhcc
Confidence            468899999999999999999999887552 23356789999999999999999999999999999999985

>KOG0575|consensus

Probab=99.56  E-value=7.4e-15  Score=89.17  Aligned_cols=70  Identities=21%  Similarity=0.457  Sum_probs=63.1

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      ++|.|+.|+|||...+..+....|...   .+..|..++.+++++|..+|..||..||++++++.|+||++..
T Consensus       207 vmYtLL~G~PPFetk~vkety~~Ik~~---~Y~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff~~g~  276 (592)
T KOG0575|consen  207 VMYTLLVGRPPFETKTVKETYNKIKLN---EYSMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLDHPFFKSGF  276 (592)
T ss_pred             HHHhhhhCCCCcccchHHHHHHHHHhc---CcccccccCHHHHHHHHHHhcCCcccCCCHHHHhcCHhhhCCC
Confidence            589999999999999999999999887   5556678999999999999999999999999999999996544

>KOG0588|consensus

Probab=99.55  E-value=5.7e-15  Score=90.88  Aligned_cols=70  Identities=26%  Similarity=0.454  Sum_probs=65.0

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      |||.|++|+.||++.+...++.++..+   .+..|..++.++++++.+||..||.+|.+.++|++|||+.+..
T Consensus       201 ILfALLtG~LPFdDdNir~LLlKV~~G---~f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g~~  270 (786)
T KOG0588|consen  201 ILFALLTGKLPFDDDNIRVLLLKVQRG---VFEMPSNISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSGYT  270 (786)
T ss_pred             HHHHHHhCCCCCCCccHHHHHHHHHcC---cccCCCcCCHHHHHHHHHHhccCccccccHHHHhhCchhhcCC
Confidence            578999999999999999999999998   6666788999999999999999999999999999999998754

>KOG0592|consensus

Probab=99.53  E-value=8.4e-15  Score=88.34  Aligned_cols=73  Identities=23%  Similarity=0.490  Sum_probs=67.0

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCCCc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPPA   76 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~~~   76 (90)
                      |+|.|+.|.+||.+.+..-.+.+|+..   .+.++..+++.++++|+++|..||.+|+++.+|..||||.+..+..
T Consensus       276 ilyQmlaG~PPFra~NeyliFqkI~~l---~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~Vdw~n  348 (604)
T KOG0592|consen  276 ILYQMLAGQPPFRAANEYLIFQKIQAL---DYEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAHPFFEGVDWEN  348 (604)
T ss_pred             HHHHHhcCCCCCccccHHHHHHHHHHh---cccCCCCCCHHHHHHHHHHHccCccccccHHHHhhCcccccCChhh
Confidence            578999999999999999999999887   5667788999999999999999999999999999999999887654

>KOG0581|consensus

Probab=99.53  E-value=3.1e-14  Score=82.43  Aligned_cols=82  Identities=29%  Similarity=0.582  Sum_probs=65.3

Q ss_pred             EEeeecCCCCCCCC-----CHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCCCc
Q psy10832          2 VVEMVDGEPPFFNE-----PPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPPA   76 (90)
Q Consensus         2 l~~~~~g~~p~~~~-----~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~~~   76 (90)
                      ++|+..|+.||...     +..+++..|..+.+|..+. ..+++++++||.+||++||..|+++.+++.|||++......
T Consensus       267 llE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~-~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~~~~~  345 (364)
T KOG0581|consen  267 LLELAIGRFPYPPPNPPYLDIFELLCAIVDEPPPRLPE-GEFSPEFRSFVSCCLRKDPSERPSAKQLLQHPFIKKFEDPN  345 (364)
T ss_pred             HHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCCc-ccCCHHHHHHHHHHhcCCcccCCCHHHHhcCHHHhhccccc
Confidence            46899999999875     6778888888876655542 24999999999999999999999999999999999765443


Q ss_pred             -ccHHHHhh
Q psy10832         77 -LLVPLMKG   84 (90)
Q Consensus        77 -~~~~~~~~   84 (90)
                       ....++..
T Consensus       346 vd~~~~~~~  354 (364)
T KOG0581|consen  346 VDMASFVRK  354 (364)
T ss_pred             ccHHHHHHH
Confidence             33334443

>KOG0610|consensus

Probab=99.49  E-value=2.6e-14  Score=84.01  Aligned_cols=73  Identities=32%  Similarity=0.524  Sum_probs=63.1

Q ss_pred             EEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCC----HHHHhcCccccccCCC
Q psy10832          2 VVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRAT----AAELLQHPFLRQAGPP   75 (90)
Q Consensus         2 l~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~----~~~l~~~~~~~~~~~~   75 (90)
                      +|||+.|..||.+.+....+.+|..... .++....++..++++|+++|.+||++|..    +.+|.+||||.+..|.
T Consensus       325 lYEmLyG~TPFKG~~~~~Tl~NIv~~~l-~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~HpFF~gVnWa  401 (459)
T KOG0610|consen  325 LYEMLYGTTPFKGSNNKETLRNIVGQPL-KFPEEPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRHPFFEGVNWA  401 (459)
T ss_pred             HHHHHhCCCCcCCCCchhhHHHHhcCCC-cCCCCCcchhHHHHHHHHHhccChhhhhccccchHHhhcCccccCCChh
Confidence            7999999999999999999989876643 33333467899999999999999999998    8999999999998765

>KOG0605|consensus

Probab=99.48  E-value=3e-14  Score=85.68  Aligned_cols=75  Identities=31%  Similarity=0.529  Sum_probs=63.0

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCC-CCCCCCCCCCHHHHHHHHHhhccCCCCCCC---HHHHhcCccccccCCCc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPP-PKLKNTHKVSPRLQGFLERLLVRDPLQRAT---AAELLQHPFLRQAGPPA   76 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~---~~~l~~~~~~~~~~~~~   76 (90)
                      |+||||.|.+||.++++.....+|..... ..++.....+.+++++|.+|+. ||..|.+   +++|..||||.+..+..
T Consensus       377 ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~HPfF~~v~W~~  455 (550)
T KOG0605|consen  377 IMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKKHPFFKGVDWDH  455 (550)
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhcCCccccCCcch
Confidence            58999999999999999999999887642 2343345678999999999997 9999986   78999999999987654

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.47  E-value=8.1e-14  Score=79.07  Aligned_cols=82  Identities=34%  Similarity=0.604  Sum_probs=65.9

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCCCcccHH
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPPALLVP   80 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~~~~~~~   80 (90)
                      ++|+|++|.+||.+.........+.....+....+..++.++.+++..||..+|.+|+++.++++|+|+........+.+
T Consensus       197 il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~~~~~~~  276 (280)
T cd06611         197 TLIELAQMEPPHHELNPMRVLLKILKSEPPTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSDQSDNKAIKD  276 (280)
T ss_pred             HHHHHHhCCCCcccCCHHHHHHHHhcCCCCCcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcChhhcccchhHHHHH
Confidence            36889999999998877666666665544445455678899999999999999999999999999999998766555555


Q ss_pred             HH
Q psy10832         81 LM   82 (90)
Q Consensus        81 ~~   82 (90)
                      ++
T Consensus       277 ~~  278 (280)
T cd06611         277 LL  278 (280)
T ss_pred             Hh
Confidence            44

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>KOG0694|consensus

Probab=99.46  E-value=5.8e-14  Score=86.43  Aligned_cols=72  Identities=25%  Similarity=0.439  Sum_probs=64.9

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCC-----HHHHhcCccccccCCC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRAT-----AAELLQHPFLRQAGPP   75 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~-----~~~l~~~~~~~~~~~~   75 (90)
                      +||||+.|++||.+++..+....|...   .+.+|..++.++.++++++|..+|++|++     +++|+.||||.+..+.
T Consensus       557 LlyeML~Gq~PF~gddEee~FdsI~~d---~~~yP~~ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i~w~  633 (694)
T KOG0694|consen  557 LLYEMLVGESPFPGDDEEEVFDSIVND---EVRYPRFLSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSIDWD  633 (694)
T ss_pred             HHHHHHcCCCCCCCCCHHHHHHHHhcC---CCCCCCcccHHHHHHHHHHhccCcccccCCCCCCchhhhhCCccccCCHH
Confidence            479999999999999999999999988   55667789999999999999999999997     4789999999987754

>KOG0201|consensus

Probab=99.45  E-value=1.3e-14  Score=85.63  Aligned_cols=84  Identities=31%  Similarity=0.573  Sum_probs=72.6

Q ss_pred             EEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCCCcccHHH
Q psy10832          2 VVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPPALLVPL   81 (90)
Q Consensus         2 l~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~~~~~~~~   81 (90)
                      +|||+.|.+|+....+.+.+..|....+|....  .+++.+++|+..||.+||+.||++.++++|.|++.......+.++
T Consensus       201 aiEla~GePP~s~~hPmrvlflIpk~~PP~L~~--~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk~a~k~s~L~~~  278 (467)
T KOG0201|consen  201 AIELAKGEPPHSKLHPMRVLFLIPKSAPPRLDG--DFSPPFKEFVEACLDKNPEFRPSAKELLKHKFIKRAKKTSELKEL  278 (467)
T ss_pred             HHHHhcCCCCCcccCcceEEEeccCCCCCcccc--ccCHHHHHHHHHHhhcCcccCcCHHHHhhhHHHHhcCCchHHHHH
Confidence            579999999999988888888887776666653  789999999999999999999999999999999998877788887


Q ss_pred             Hhhhhc
Q psy10832         82 MKGSRH   87 (90)
Q Consensus        82 ~~~~~~   87 (90)
                      +.+..+
T Consensus       279 i~r~~~  284 (467)
T KOG0201|consen  279 IDRYKR  284 (467)
T ss_pred             HHHHHH
Confidence            776643

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.42  E-value=7.7e-13  Score=75.56  Aligned_cols=85  Identities=31%  Similarity=0.525  Sum_probs=64.8

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCCCcccHH
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPPALLVP   80 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~~~~~~~   80 (90)
                      ++|+|++|.+||...+.......+.....+....+..++.++.+++.+||..+|++||++.+++.|+||...........
T Consensus       204 il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~~~~~~~  283 (292)
T cd06644         204 TLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPFVSSVTSNRPLRE  283 (292)
T ss_pred             HHHHHhcCCCCCccccHHHHHHHHhcCCCccCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcCccccccccchhHHH
Confidence            36899999999988766555555544433333344567899999999999999999999999999999998776666555


Q ss_pred             HHhhh
Q psy10832         81 LMKGS   85 (90)
Q Consensus        81 ~~~~~   85 (90)
                      .+.++
T Consensus       284 ~~~~~  288 (292)
T cd06644         284 LVAEA  288 (292)
T ss_pred             HHHHh
Confidence            55444

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.42  E-value=6.3e-13  Score=77.10  Aligned_cols=70  Identities=29%  Similarity=0.497  Sum_probs=59.0

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCC-----CHHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRA-----TAAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~-----~~~~l~~~~~~~~~~   73 (90)
                      ++|+|++|..||.+.+.......+...   ....+..+++++.+++.+||..||.+|+     ++.+++.|+||.+..
T Consensus       184 il~elltg~~Pf~~~~~~~~~~~~~~~---~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f~~~~  258 (323)
T cd05571         184 VMYEMMCGRLPFYNQDHEKLFELILME---EIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFASIN  258 (323)
T ss_pred             hhhhhhcCCCCCCCCCHHHHHHHHHcC---CCCCCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCCcCCCC
Confidence            579999999999988877766666655   3344567899999999999999999999     799999999998754

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>KOG0198|consensus

Probab=99.41  E-value=1.1e-12  Score=75.80  Aligned_cols=72  Identities=36%  Similarity=0.547  Sum_probs=57.7

Q ss_pred             CEEeeecCCCCCCC-CCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFN-EPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      ++.||++|.+||.. .........+..... .+..|..+++++++|+..|+..+|..|+++++++.|||.....
T Consensus       211 tVvEM~Tg~~PW~~~~~~~~~~~~ig~~~~-~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~~  283 (313)
T KOG0198|consen  211 TVVEMLTGKPPWSEFFEEAEALLLIGREDS-LPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQNS  283 (313)
T ss_pred             EEEeccCCCCcchhhcchHHHHHHHhccCC-CCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhccc
Confidence            46899999999998 455555555554432 2355678999999999999999999999999999999997643

>KOG0583|consensus

Probab=99.41  E-value=3e-13  Score=79.91  Aligned_cols=68  Identities=29%  Similarity=0.541  Sum_probs=61.4

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCC-CHHHHHHHHHhhccCCCCCCCHHHHhcCccccc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKV-SPRLQGFLERLLVRDPLQRATAAELLQHPFLRQ   71 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~   71 (90)
                      +||.|++|..||...+.......|..+   .+..|..+ +.+++.++.+||..+|..|+++.+++.|+||+.
T Consensus       212 iLy~ml~G~~PF~d~~~~~l~~ki~~~---~~~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~  280 (370)
T KOG0583|consen  212 ILYVLLCGRLPFDDSNVPNLYRKIRKG---EFKIPSYLLSPEARSLIEKMLVPDPSTRITLLEILEHPWFQK  280 (370)
T ss_pred             HHHHHHhCCCCCCCccHHHHHHHHhcC---CccCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence            478999999999999888888888877   55566677 999999999999999999999999999999997

>KOG0579|consensus

Probab=99.41  E-value=6.1e-13  Score=82.69  Aligned_cols=84  Identities=32%  Similarity=0.599  Sum_probs=75.4

Q ss_pred             EEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCCCcccHHH
Q psy10832          2 VVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPPALLVPL   81 (90)
Q Consensus         2 l~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~~~~~~~~   81 (90)
                      |.||..+.+|-...++...+.+|....+|....|..|+..+.+|+.+||.+||..||++.+|+.||||+...+...+-++
T Consensus       225 LIEMAqiEPPHhelnpMRVllKiaKSePPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~~~SnK~ireL  304 (1187)
T KOG0579|consen  225 LIEMAQIEPPHHELNPMRVLLKIAKSEPPTLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQNAPSNKMIREL  304 (1187)
T ss_pred             HHHHhccCCCccccchHHHHHHHhhcCCCcccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhCcccccCCcchHHHHH
Confidence            45888899999999999999999999888888889999999999999999999999999999999999988777766666


Q ss_pred             Hhhh
Q psy10832         82 MKGS   85 (90)
Q Consensus        82 ~~~~   85 (90)
                      +.++
T Consensus       305 lAEa  308 (1187)
T KOG0579|consen  305 LAEA  308 (1187)
T ss_pred             HHHH
Confidence            6654

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.40  E-value=4.5e-13  Score=76.73  Aligned_cols=85  Identities=69%  Similarity=1.194  Sum_probs=66.2

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCCCcccHH
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPPALLVP   80 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~~~~~~~   80 (90)
                      ++|+|++|..||...........+.....+........+..+.+++..|+..+|.+||++.+++.|+||......+..++
T Consensus       207 il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~~~~~~~~~~~~  286 (292)
T cd06658         207 MVIEMIDGEPPYFNEPPLQAMRRIRDNLPPRVKDSHKVSSVLRGFLDLMLVREPSQRATAQELLQHPFLKLAGPPSCIVP  286 (292)
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccccccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhhccCCccccch
Confidence            36899999999998776655544443322233333456889999999999999999999999999999999988888887


Q ss_pred             HHhhh
Q psy10832         81 LMKGS   85 (90)
Q Consensus        81 ~~~~~   85 (90)
                      ++...
T Consensus       287 ~~~~~  291 (292)
T cd06658         287 LMRQY  291 (292)
T ss_pred             hhhhc
Confidence            77654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>KOG0983|consensus

Probab=99.39  E-value=1.6e-12  Score=73.81  Aligned_cols=75  Identities=25%  Similarity=0.522  Sum_probs=63.0

Q ss_pred             CEEeeecCCCCCCCC-CHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCCC
Q psy10832          1 MVVEMVDGEPPFFNE-PPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPP   75 (90)
Q Consensus         1 il~~~~~g~~p~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~~   75 (90)
                      .+||+.+|++||.+. ...+.+..+....+|..+.-..+++++.+|+..||.+|+++||...++++|+|+.....-
T Consensus       283 TlveLaTg~yPy~~c~tdFe~ltkvln~ePP~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~~ye~a  358 (391)
T KOG0983|consen  283 TLVELATGQYPYKGCKTDFEVLTKVLNEEPPLLPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEHPFIKRYETA  358 (391)
T ss_pred             chhhhhcccCCCCCCCccHHHHHHHHhcCCCCCCcccCcCHHHHHHHHHHhhcCcccCcchHHHhcCcceeecchh
Confidence            378999999999995 456677778777666666555699999999999999999999999999999998865433

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.39  E-value=9.3e-13  Score=75.60  Aligned_cols=88  Identities=64%  Similarity=1.118  Sum_probs=68.8

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCCCcccHH
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPPALLVP   80 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~~~~~~~   80 (90)
                      ++|+|++|..||...........+..........+..++..+.+++..||..+|.+|+++.++++|+||........+.+
T Consensus       206 il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~~~~~~~~~~~~~~~  285 (297)
T cd06659         206 MVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNAHKISPVLRDFLERMLTREPQERATAQELLDHPFLLQTGLPECLVP  285 (297)
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHhccCCCCccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhChhhccCCCcccccc
Confidence            36889999999988776666555544433333334567889999999999999999999999999999998887887777


Q ss_pred             HHhhhhcc
Q psy10832         81 LMKGSRHS   88 (90)
Q Consensus        81 ~~~~~~~~   88 (90)
                      +.+..++.
T Consensus       286 ~~~~~~~~  293 (297)
T cd06659         286 LIQQYRKR  293 (297)
T ss_pred             hHHHHhhh
Confidence            77666543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.39  E-value=9.9e-13  Score=74.44  Aligned_cols=83  Identities=31%  Similarity=0.583  Sum_probs=61.3

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCCCcccHH
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPPALLVP   80 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~~~~~~~   80 (90)
                      ++|+|++|..||...+.......+.....+.... ..++.++.+++.+||..+|++|++++++++|+||.......-...
T Consensus       187 il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~~~~~~~~~~~~~~~  265 (274)
T cd06609         187 TAIELAKGEPPLSDLHPMRVLFLIPKNNPPSLEG-NKFSKPFKDFVSLCLNKDPKERPSAKELLKHKFIKKAKKTSYLTL  265 (274)
T ss_pred             HHHHHHhCCCCcccCchHHHHHHhhhcCCCCCcc-cccCHHHHHHHHHHhhCChhhCcCHHHHhhChhhcCCCcccHHHH
Confidence            4689999999998876555555554443333221 227889999999999999999999999999999998776644444


Q ss_pred             HHhh
Q psy10832         81 LMKG   84 (90)
Q Consensus        81 ~~~~   84 (90)
                      ....
T Consensus       266 ~~~~  269 (274)
T cd06609         266 LIER  269 (274)
T ss_pred             HHHH
Confidence            4433

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.38  E-value=5.7e-13  Score=77.46  Aligned_cols=70  Identities=27%  Similarity=0.547  Sum_probs=58.7

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCC-----HHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRAT-----AAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~-----~~~l~~~~~~~~~~   73 (90)
                      ++|+|++|..||.+.+.......+..+   ....+..++.++++++.+||..||.+|++     +.+++.||||.+..
T Consensus       204 il~elltg~~pf~~~~~~~~~~~i~~~---~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~~~  278 (329)
T PTZ00263        204 LLYEFIAGYPPFFDDTPFRIYEKILAG---RLKFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHGAN  278 (329)
T ss_pred             HHHHHHcCCCCCCCCCHHHHHHHHhcC---CcCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccCCCC
Confidence            468999999999998887777777666   33345568999999999999999999986     79999999998643

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.37  E-value=9.7e-13  Score=75.09  Aligned_cols=70  Identities=31%  Similarity=0.695  Sum_probs=55.4

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCcccc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLR   70 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~   70 (90)
                      ++|+|++|.+||...........+.....+....+..+...+.+++.+|+..+|++||++.+++.||||+
T Consensus       222 i~~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~  291 (291)
T cd06639         222 TAIELGDGDPPLFDMHPVKTLFKIPRNPPPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPFIK  291 (291)
T ss_pred             HHHHHhhCCCCCCCCcHHHHHHHHhcCCCCCCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhcCcccC
Confidence            3688999999998876655555555443333434455778899999999999999999999999999984

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.36  E-value=1.6e-12  Score=73.95  Aligned_cols=73  Identities=30%  Similarity=0.550  Sum_probs=58.8

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      ++|+|++|.+||...+.......+.....+....+..++.++.+++..||..+|.+||++.+++.|+||....
T Consensus       197 il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~  269 (282)
T cd06643         197 TLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPFVTVNS  269 (282)
T ss_pred             HHHHHccCCCCccccCHHHHHHHHhhcCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCCCEeccC
Confidence            3688999999999877766666655443333344556789999999999999999999999999999999654

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.36  E-value=1.2e-12  Score=74.71  Aligned_cols=78  Identities=78%  Similarity=1.293  Sum_probs=60.9

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCCCccc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPPALL   78 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~~~~~   78 (90)
                      ++|+|++|..||...+.......+.....+....+...+..+.+++..||..+|.+||++.+++.|+||...+....+
T Consensus       204 ~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~~~~~  281 (285)
T cd06648         204 MVIEMVDGEPPYFNEPPLQAMKRIRDNLPPKLKNLHKVSPRLRSFLDRMLVRDPAQRATAAELLNHPFLAKAGPPSSI  281 (285)
T ss_pred             HHHHHHhCCCCCcCCCHHHHHHHHHhcCCCCCcccccCCHHHHHHHHHHcccChhhCcCHHHHccCcccccCCCcchh
Confidence            368899999999887766666665555333333334478899999999999999999999999999999987754443

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.35  E-value=8.3e-13  Score=76.54  Aligned_cols=70  Identities=21%  Similarity=0.390  Sum_probs=58.8

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCH------HHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA------AELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~------~~l~~~~~~~~~~   73 (90)
                      ++|+|++|..||.+.+.......+....   ...+..++.++.+++.+||..||.+|+++      .+++.|+||....
T Consensus       185 il~el~~g~~Pf~~~~~~~~~~~i~~~~---~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~~~  260 (320)
T cd05590         185 LLYEMLCGHAPFEAENEDDLFEAILNDE---VVYPTWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKELD  260 (320)
T ss_pred             HHHHHhhCCCCCCCCCHHHHHHHHhcCC---CCCCCCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCCCC
Confidence            4689999999999988887777776653   33345689999999999999999999997      8999999998654

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>KOG0598|consensus

Probab=99.35  E-value=4e-13  Score=77.83  Aligned_cols=74  Identities=30%  Similarity=0.473  Sum_probs=63.2

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCC----CHHHHhcCccccccCCCc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRA----TAAELLQHPFLRQAGPPA   76 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~----~~~~l~~~~~~~~~~~~~   76 (90)
                      ++|+|++|.+||.+.+......+|..+..  ...+..++.+++++++++|..||++|.    .+.++..||||.+..+..
T Consensus       214 llYeML~G~pPF~~~~~~~~~~~I~~~k~--~~~p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~~inW~~  291 (357)
T KOG0598|consen  214 LLYEMLTGKPPFYAEDVKKMYDKILKGKL--PLPPGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFKGINWEK  291 (357)
T ss_pred             HHHHHhhCCCCCcCccHHHHHHHHhcCcC--CCCCccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCcccccCCHHH
Confidence            47999999999999999999999988842  222345899999999999999999997    478999999999887654

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.35  E-value=4.1e-12  Score=73.76  Aligned_cols=70  Identities=30%  Similarity=0.481  Sum_probs=58.5

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCC-----CHHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRA-----TAAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~-----~~~~l~~~~~~~~~~   73 (90)
                      ++|+|++|..||.+.+.......+...   ....+..+++++.+++.+||..||.+|+     ++.++++|+||.+..
T Consensus       185 il~el~tG~~Pf~~~~~~~~~~~i~~~---~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~~  259 (325)
T cd05594         185 VMYEMMCGRLPFYNQDHEKLFELILME---EIRFPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAGIV  259 (325)
T ss_pred             eeeeeccCCCCCCCCCHHHHHHHHhcC---CCCCCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcCCCC
Confidence            589999999999988877766666554   3334567899999999999999999997     899999999998643

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.35  E-value=6.4e-13  Score=76.10  Aligned_cols=85  Identities=45%  Similarity=0.747  Sum_probs=64.7

Q ss_pred             EEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCCCcccHHH
Q psy10832          2 VVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPPALLVPL   81 (90)
Q Consensus         2 l~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~~~~~~~~   81 (90)
                      +|++++|..||...+.......+.....+....+..++....+++..||..+|..|+++.+++.|+||.....-..+.+.
T Consensus       205 l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~~~~~~~~~~~~~~~  284 (293)
T cd06647         205 AIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLKIAKPLSSLTPL  284 (293)
T ss_pred             HHHHHhCCCCCCCCChhhheeehhcCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcCcccccccch
Confidence            67899999999887655443333333223333344567889999999999999999999999999999988877777777


Q ss_pred             Hhhhh
Q psy10832         82 MKGSR   86 (90)
Q Consensus        82 ~~~~~   86 (90)
                      +....
T Consensus       285 ~~~~~  289 (293)
T cd06647         285 IAAAK  289 (293)
T ss_pred             HHHhh
Confidence            76554

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>KOG0616|consensus

Probab=99.35  E-value=2.1e-13  Score=77.65  Aligned_cols=73  Identities=27%  Similarity=0.511  Sum_probs=64.9

Q ss_pred             EEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCC-----HHHHhcCccccccCCCc
Q psy10832          2 VVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRAT-----AAELLQHPFLRQAGPPA   76 (90)
Q Consensus         2 l~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~-----~~~l~~~~~~~~~~~~~   76 (90)
                      +|||+.|.+||.+.+......+|..+   ...+|..++.++++++.++|+.|-.+|.+     ..+++.|+||.+..+..
T Consensus       231 IYEMlaG~pPF~~~~~~~iY~KI~~~---~v~fP~~fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~v~W~~  307 (355)
T KOG0616|consen  231 IYEMLAGYPPFYDDNPIQIYEKILEG---KVKFPSYFSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKGVDWEA  307 (355)
T ss_pred             HHHHHcCCCCCcCCChHHHHHHHHhC---cccCCcccCHHHHHHHHHHHhhhhHhhhcCcCCCccccccCcccccccHHH
Confidence            68999999999999999999999999   67778889999999999999999999953     67899999999877654


Q ss_pred             c
Q psy10832         77 L   77 (90)
Q Consensus        77 ~   77 (90)
                      .
T Consensus       308 i  308 (355)
T KOG0616|consen  308 I  308 (355)
T ss_pred             H
Confidence            3

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.35  E-value=1.1e-12  Score=75.14  Aligned_cols=70  Identities=26%  Similarity=0.506  Sum_probs=58.6

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCC-----HHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRAT-----AAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~-----~~~l~~~~~~~~~~   73 (90)
                      ++|+|++|..||.+.+.......+...   ....+..++..+++++.+||..||.+|++     +++++.|+||....
T Consensus       187 il~~l~~g~~pf~~~~~~~~~~~i~~~---~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~~  261 (291)
T cd05612         187 LIYEMLVGYPPFFDDNPFGIYEKILAG---KLEFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKSVD  261 (291)
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHhC---CcCCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccccCCC
Confidence            468999999999998887777777665   33345567999999999999999999995     99999999998644

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>KOG0032|consensus

Probab=99.35  E-value=2.4e-12  Score=76.36  Aligned_cols=73  Identities=29%  Similarity=0.484  Sum_probs=62.7

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCC-CCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPP-PKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      ++|.|++|.+||.+.+.......+..+.. .....+..++..+++||.+++..||..|+++.++++|||+.+..
T Consensus       227 i~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpWi~~~~  300 (382)
T KOG0032|consen  227 ILYILLSGVPPFWGETEFEIFLAILRGDFDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQHPWIKSIG  300 (382)
T ss_pred             HHHHHhhCCCCCcCCChhHHHHHHHcCCCCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcCccccCCc
Confidence            36889999999999988888778887755 23445677899999999999999999999999999999999753

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.35  E-value=6.2e-12  Score=72.77  Aligned_cols=69  Identities=30%  Similarity=0.507  Sum_probs=58.1

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCC-----HHHHhcCcccccc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRAT-----AAELLQHPFLRQA   72 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~-----~~~l~~~~~~~~~   72 (90)
                      ++|+|++|..||.+.+.......+...   ....+..+++++.+++..||..||.+|++     +.+++.|+||...
T Consensus       187 il~el~tg~~p~~~~~~~~~~~~i~~~---~~~~p~~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~~  260 (318)
T cd05582         187 LMFEMLTGSLPFQGKDRKETMTMILKA---KLGMPQFLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFSTI  260 (318)
T ss_pred             EeeeeccCCCCCCCCCHHHHHHHHHcC---CCCCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCcCCC
Confidence            589999999999998877777776655   23345567999999999999999999999     7889999999864

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.34  E-value=2.1e-12  Score=75.56  Aligned_cols=70  Identities=21%  Similarity=0.427  Sum_probs=58.8

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCC-----CHHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRA-----TAAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~-----~~~~l~~~~~~~~~~   73 (90)
                      ++|+|++|.+||.+.+.......+....   ...+..++..+.+++.+||..+|.+|+     +++++++||||.+..
T Consensus       217 il~ell~G~~Pf~~~~~~~~~~~i~~~~---~~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~~~  291 (340)
T PTZ00426        217 FIYEILVGCPPFYANEPLLIYQKILEGI---IYFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGNID  291 (340)
T ss_pred             HHHHHhcCCCCCCCCCHHHHHHHHhcCC---CCCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcCCCC
Confidence            4789999999999988777777776653   334566799999999999999999996     799999999998754

>KOG4717|consensus

Probab=99.34  E-value=6.2e-13  Score=80.94  Aligned_cols=70  Identities=27%  Similarity=0.496  Sum_probs=63.7

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      |||-+.+|++||...+..+.+..|...   .+..|..++.+|+++|.+||..||.+|.+.++|.+++|++...
T Consensus       208 ILyMLVCGq~PFqeANDSETLTmImDC---KYtvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq~~D  277 (864)
T KOG4717|consen  208 ILYMLVCGQPPFQEANDSETLTMIMDC---KYTVPSHVSKECRDLIQSMLVRDPKKRASLEEIVSTSWLQAGD  277 (864)
T ss_pred             HHHHHHhCCCccccccchhhhhhhhcc---cccCchhhhHHHHHHHHHHHhcCchhhccHHHHhccccccCCC
Confidence            467888999999999999999999888   6667788999999999999999999999999999999999754

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.34  E-value=2.3e-12  Score=74.71  Aligned_cols=70  Identities=21%  Similarity=0.400  Sum_probs=59.2

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCC-------CHHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRA-------TAAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~-------~~~~l~~~~~~~~~~   73 (90)
                      ++|+|++|..||.+.+.......+....   ...+..++.++.+++.+||..+|.+|+       ++.+++.|+||....
T Consensus       185 il~el~tg~~Pf~~~~~~~~~~~i~~~~---~~~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~~~  261 (321)
T cd05591         185 LMYEMMAGQPPFEADNEDDLFESILHDD---VLYPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKEID  261 (321)
T ss_pred             HHHHHhcCCCCCCCCCHHHHHHHHHcCC---CCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCccCCCC
Confidence            4789999999999998888877777663   333456799999999999999999999       889999999997643

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.33  E-value=1.6e-12  Score=73.27  Aligned_cols=69  Identities=35%  Similarity=0.713  Sum_probs=53.5

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFL   69 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~   69 (90)
                      ++|+|++|.+||...........+.....+....+..++.++.+++.+||..||.+||++.+++.|||+
T Consensus       207 il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~~  275 (275)
T cd06608         207 TAIELADGKPPLCDMHPMRALFKIPRNPPPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLEHPFI  275 (275)
T ss_pred             HHHHHHhCCCCccccchHHHHHHhhccCCCCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCCCC
Confidence            368899999999876555555555544333333334478899999999999999999999999999996

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.33  E-value=1.5e-12  Score=72.89  Aligned_cols=69  Identities=41%  Similarity=0.833  Sum_probs=53.1

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFL   69 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~   69 (90)
                      ++|+|++|..||...........+..........+..++.++.+++.+|+..+|.+|+++.+++.|+||
T Consensus       188 il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~~~~  256 (256)
T cd06612         188 TAIEMAEGKPPYSDIHPMRAIFMIPNKPPPTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQHPFI  256 (256)
T ss_pred             HHHHHHhCCCCCCCcchhhhhhhhccCCCCCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcCCCC
Confidence            367899999999887665544444333222333344578899999999999999999999999999997

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.33  E-value=3.7e-12  Score=73.03  Aligned_cols=83  Identities=77%  Similarity=1.288  Sum_probs=62.4

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCCCcccHH
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPPALLVP   80 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~~~~~~~   80 (90)
                      ++|+|++|..||.+.........+....+.........+.++.+++.+||..+|.+|+++.+++.|+||.....+....+
T Consensus       205 il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~~~~~~~~~~~~~~~  284 (292)
T cd06657         205 MVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPSCIVP  284 (292)
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHhhCCcccCCcccCCHHHHHHHHHHHhCCcccCcCHHHHhcChHHhccCCCccccc
Confidence            36789999999988766655444433322233333457889999999999999999999999999999998886665555


Q ss_pred             HHh
Q psy10832         81 LMK   83 (90)
Q Consensus        81 ~~~   83 (90)
                      .+.
T Consensus       285 ~~~  287 (292)
T cd06657         285 LMR  287 (292)
T ss_pred             HHH
Confidence            443

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.32  E-value=1.3e-11  Score=71.67  Aligned_cols=72  Identities=24%  Similarity=0.402  Sum_probs=57.1

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCC-CCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPP-PKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      ++|+|++|..||.+.+.......+..... ..++....++.++.+++.+||. +|.+|+++.+++.|+||....
T Consensus       198 il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~~~~~~~  270 (330)
T cd05601         198 IAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCHPFFSKID  270 (330)
T ss_pred             eeeeeccCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCCCCcCCCC
Confidence            58999999999998877766666655422 2223334578999999999997 999999999999999998643

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.32  E-value=2e-12  Score=72.67  Aligned_cols=69  Identities=30%  Similarity=0.577  Sum_probs=52.6

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCC---CCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNT---HKVSPRLQGFLERLLVRDPLQRATAAELLQHPFL   69 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~---~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~   69 (90)
                      ++|+|++|..||...+.............+.....   ..++..+.+++..|+..||.+||++.+++.||||
T Consensus       196 i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~~  267 (267)
T cd06610         196 TAIELATGAAPYSKYPPMKVLMLTLQNDPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKHKFF  267 (267)
T ss_pred             HHHHHHhCCCCccccChhhhHHHHhcCCCCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence            36789999999988766554444444333222221   3568899999999999999999999999999997

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.32  E-value=1.9e-12  Score=74.30  Aligned_cols=74  Identities=50%  Similarity=0.828  Sum_probs=58.4

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGP   74 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~   74 (90)
                      ++|+|++|..||.+.+.......+.....+....+..+++.+.+++.+||..+|.+|+++.+++.|+||.....
T Consensus       204 il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~~~~~  277 (296)
T cd06655         204 MAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKLAKP  277 (296)
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHhcCCcccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhChHhhhccc
Confidence            36899999999998776655545443333334445568899999999999999999999999999999997553

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.31  E-value=2.5e-12  Score=74.30  Aligned_cols=69  Identities=33%  Similarity=0.559  Sum_probs=57.7

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCC---CHHHHhcCcccccc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRA---TAAELLQHPFLRQA   72 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~---~~~~l~~~~~~~~~   72 (90)
                      ++|+|++|..||.+.+.......+...   ....+..+++++.+++.+||..||.+|+   ++.+++.||||...
T Consensus       182 il~el~tg~~pf~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~hp~~~~~  253 (312)
T cd05585         182 LLYEMLTGLPPFYDENVNEMYRKILQE---PLRFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPFFSQL  253 (312)
T ss_pred             HHHHHHhCCCCcCCCCHHHHHHHHHcC---CCCCCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcCCCcCCC
Confidence            468999999999988877777666655   3344567899999999999999999997   47899999999975

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.31  E-value=3.9e-12  Score=73.80  Aligned_cols=69  Identities=33%  Similarity=0.615  Sum_probs=58.4

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCC-----CHHHHhcCcccccc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRA-----TAAELLQHPFLRQA   72 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~-----~~~~l~~~~~~~~~   72 (90)
                      ++|+|++|..||.+.+.......+..+   ....+..+++++.+++.+||..+|.+|+     ++.+++.|+||...
T Consensus       189 il~ell~G~~pf~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~~  262 (323)
T cd05584         189 LMYDMLTGAPPFTAENRKKTIDKILKG---KLNLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRHV  262 (323)
T ss_pred             HHHHHhcCCCCCCCCCHHHHHHHHHcC---CCCCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcCCC
Confidence            478999999999998877777777665   3344556799999999999999999999     79999999999764

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>KOG0690|consensus

Probab=99.31  E-value=9.9e-13  Score=76.31  Aligned_cols=73  Identities=30%  Similarity=0.451  Sum_probs=65.2

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCC-----HHHHhcCccccccCCC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRAT-----AAELLQHPFLRQAGPP   75 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~-----~~~l~~~~~~~~~~~~   75 (90)
                      ++|||++|+.||-..+...+...|...   ...+|..++++++.++..+|.+||.+|.+     +.+++.|+||.+..+.
T Consensus       357 VMYEMmCGRLPFyn~dh~kLFeLIl~e---d~kFPr~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v~W~  433 (516)
T KOG0690|consen  357 VMYEMMCGRLPFYNKDHEKLFELILME---DLKFPRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASVDWE  433 (516)
T ss_pred             HHHHHHhccCcccccchhHHHHHHHhh---hccCCccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhccCCHH
Confidence            589999999999999988888888877   56678899999999999999999999986     6899999999988765


Q ss_pred             c
Q psy10832         76 A   76 (90)
Q Consensus        76 ~   76 (90)
                      .
T Consensus       434 ~  434 (516)
T KOG0690|consen  434 A  434 (516)
T ss_pred             H
Confidence            4

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.30  E-value=6.8e-12  Score=71.99  Aligned_cols=81  Identities=46%  Similarity=0.738  Sum_probs=59.7

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCCCcccHH
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPPALLVP   80 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~~~~~~~   80 (90)
                      ++|+|++|..||...........+.....+....+..++..+.+++.+||..+|..||++.+++.|+||........+.+
T Consensus       205 il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~~~~~~~~~~~~~~~  284 (296)
T cd06654         205 MAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKPLSSLTP  284 (296)
T ss_pred             HHHHHHhCCCCCCCCCHHHhHHHHhcCCCCCCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhChhhhccCCccccHH
Confidence            36899999999988766444433333322233334567889999999999999999999999999999987665444444


Q ss_pred             H
Q psy10832         81 L   81 (90)
Q Consensus        81 ~   81 (90)
                      .
T Consensus       285 ~  285 (296)
T cd06654         285 L  285 (296)
T ss_pred             H
Confidence            3

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.30  E-value=3.5e-12  Score=74.22  Aligned_cols=70  Identities=27%  Similarity=0.478  Sum_probs=57.7

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCC-----CHHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRA-----TAAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~-----~~~~l~~~~~~~~~~   73 (90)
                      ++|+|++|..||.+.+.......+...   ....+..++.++.+++.+||..||.+|+     ++.+++.|+||.+..
T Consensus       184 il~elltG~~Pf~~~~~~~~~~~~~~~---~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~~  258 (328)
T cd05593         184 VMYEMMCGRLPFYNQDHEKLFELILME---DIKFPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTGVN  258 (328)
T ss_pred             HHHHHhhCCCCCCCCCHHHHHHHhccC---CccCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCcCCCC
Confidence            478999999999988777666666544   3344567899999999999999999997     799999999998643

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.30  E-value=3e-12  Score=72.91  Aligned_cols=69  Identities=25%  Similarity=0.419  Sum_probs=49.2

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCC---------------------CCC--------CCCCCCCHHHHHHHHHhhc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPP---------------------PKL--------KNTHKVSPRLQGFLERLLV   51 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~---------------------~~~--------~~~~~~~~~~~~~i~~~l~   51 (90)
                      ++|+|++|.+||.+.+.......+.....                     +..        .....++.++.+++.+||.
T Consensus       190 il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~  269 (287)
T cd07848         190 ILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLK  269 (287)
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHcc
Confidence            46899999999998765444333221100                     000        0011367889999999999


Q ss_pred             cCCCCCCCHHHHhcCccc
Q psy10832         52 RDPLQRATAAELLQHPFL   69 (90)
Q Consensus        52 ~~p~~R~~~~~l~~~~~~   69 (90)
                      .||.+|++++++++||||
T Consensus       270 ~~P~~R~s~~~~l~hp~f  287 (287)
T cd07848         270 LNPTDRYLTEQCLNHPAF  287 (287)
T ss_pred             CCcccCCCHHHHhcCCCC
Confidence            999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.29  E-value=2.9e-12  Score=74.23  Aligned_cols=70  Identities=21%  Similarity=0.458  Sum_probs=58.5

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCH-----HHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA-----AELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~-----~~l~~~~~~~~~~   73 (90)
                      ++|+|++|..||.+.+.......+....   ...+..++.++.+++.+||..||.+|+++     .+++.|+||....
T Consensus       185 il~~l~~G~~pf~~~~~~~~~~~i~~~~---~~~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~~~~~~  259 (318)
T cd05570         185 LLYEMLAGQSPFEGDDEDELFQSILEDE---VRYPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFREID  259 (318)
T ss_pred             HHHHHhhCCCCCCCCCHHHHHHHHHcCC---CCCCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCCCcCCCC
Confidence            3689999999999888777776666553   33345679999999999999999999998     9999999998754

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.29  E-value=3.5e-12  Score=72.63  Aligned_cols=79  Identities=48%  Similarity=0.839  Sum_probs=61.2

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCCCcccH
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPPALLV   79 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~~~~~~   79 (90)
                      ++|+|++|..||...+.......+.....+....+..++.++.+++..|+..+|.+|+++.+++.|+||..........
T Consensus       205 il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~~~~~~  283 (286)
T cd06614         205 MCIEMAEGEPPYLREPPLRALFLITTKGIPPLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKKACPKEEFA  283 (286)
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCcchhhCCHHHHHHHHHHhccChhhCcCHHHHhhChHhhccCchHhhh
Confidence            4688999999999877666555554443333333344789999999999999999999999999999999876655443

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.29  E-value=5.8e-12  Score=70.97  Aligned_cols=69  Identities=32%  Similarity=0.406  Sum_probs=52.2

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFL   69 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~   69 (90)
                      ++|+|++|..||...+.......+..........+..++.++.+++.+||..+|.+||++.+++.|+||
T Consensus       197 ~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~  265 (265)
T cd06631         197 TVFEMATGKPPLASMDRLAAMFYIGAHRGLMPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLRHDFL  265 (265)
T ss_pred             HHHHHHhCCCccccCChHHHHHHhhhccCCCCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence            367899999999876554443333332222223345689999999999999999999999999999997

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.29  E-value=5.2e-12  Score=71.08  Aligned_cols=74  Identities=20%  Similarity=0.402  Sum_probs=56.5

Q ss_pred             CEEeeecCCCCCCCCC--HHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCC-----HHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEP--PLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRAT-----AAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~-----~~~l~~~~~~~~~~   73 (90)
                      ++|+|++|..||....  .......+..... ....+...+.++.+++.+||..+|.+|++     +.++++||||.+..
T Consensus       181 il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~  259 (262)
T cd05572         181 LLYELLTGRPPFGEDDEDPMEIYNDILKGNG-KLEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFNGFD  259 (262)
T ss_pred             HHHHHHhCCCCcCCCCCCHHHHHHHHhccCC-CCCCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcChhhhCCC
Confidence            3688999999998765  5555555543211 23334456899999999999999999999     99999999999765


Q ss_pred             CC
Q psy10832         74 PP   75 (90)
Q Consensus        74 ~~   75 (90)
                      +.
T Consensus       260 ~~  261 (262)
T cd05572         260 WE  261 (262)
T ss_pred             CC
Confidence            43

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.29  E-value=5.4e-12  Score=73.22  Aligned_cols=70  Identities=26%  Similarity=0.467  Sum_probs=58.4

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCC-----CHHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRA-----TAAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~-----~~~~l~~~~~~~~~~   73 (90)
                      ++|+|++|..||.+.+.......+....   ...+..++.++.+++.+||..||.+|+     ++.++++|+||....
T Consensus       190 il~el~~G~~pf~~~~~~~~~~~i~~~~---~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~~~  264 (324)
T cd05589         190 LIYEMLVGESPFPGDDEEEVFDSIVNDE---VRYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRDIN  264 (324)
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHhCC---CCCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcCCCC
Confidence            4689999999999988877777776653   334556899999999999999999999     589999999998643

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>KOG0580|consensus

Probab=99.28  E-value=2.3e-12  Score=71.61  Aligned_cols=68  Identities=29%  Similarity=0.586  Sum_probs=60.8

Q ss_pred             EEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCcccccc
Q psy10832          2 VVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQA   72 (90)
Q Consensus         2 l~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~   72 (90)
                      +||++.|.+||.+.+......+|...   ....|..++.+++++|.+|+..+|..|....+++.|||+...
T Consensus       212 ~yeflvg~ppFes~~~~etYkrI~k~---~~~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI~a~  279 (281)
T KOG0580|consen  212 CYEFLVGLPPFESQSHSETYKRIRKV---DLKFPSTISGGAADLISRLLVKNPIERLALTEVMDHPWIVAN  279 (281)
T ss_pred             HHHHHhcCCchhhhhhHHHHHHHHHc---cccCCcccChhHHHHHHHHhccCccccccHHHHhhhHHHHhc
Confidence            58999999999999888888888877   455567899999999999999999999999999999998754

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.27  E-value=4.6e-12  Score=73.38  Aligned_cols=70  Identities=24%  Similarity=0.452  Sum_probs=56.8

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCH-HHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA-AELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~-~~l~~~~~~~~~~   73 (90)
                      ++|+|++|..||.+.+.......+....   ...+..++.++++++..||..||.+|+++ +++++|+||....
T Consensus       185 il~el~~g~~Pf~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~h~~f~~~~  255 (316)
T cd05620         185 LLYEMLIGQSPFHGDDEDELFESIRVDT---PHYPRWITKESKDILEKLFERDPTRRLGVVGNIRGHPFFKTIN  255 (316)
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHhCC---CCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCCCcCCCC
Confidence            4689999999999888777666665542   23345679999999999999999999997 6899999998753

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>KOG0574|consensus

Probab=99.27  E-value=8.7e-13  Score=75.92  Aligned_cols=86  Identities=27%  Similarity=0.578  Sum_probs=74.2

Q ss_pred             EEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCCCcccHHH
Q psy10832          2 VVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPPALLVPL   81 (90)
Q Consensus         2 l~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~~~~~~~~   81 (90)
                      ..||..|++||..--+.+.+.-|....+|.+..|..++.++-+|++.||.++|+.|.++.++++|+|+++...-.-+...
T Consensus       219 aIEMAEG~PPYsDIHPMRAIFMIPT~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~FiknA~g~~I~~~~  298 (502)
T KOG0574|consen  219 AIEMAEGRPPYSDIHPMRAIFMIPTKPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEHTFIKNAPGCDIMQLM  298 (502)
T ss_pred             hhhhhcCCCCcccccccceeEeccCCCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhhhhhcCCCcccHHHHH
Confidence            35899999999998777777777777778888888999999999999999999999999999999999988777766666


Q ss_pred             Hhhhhc
Q psy10832         82 MKGSRH   87 (90)
Q Consensus        82 ~~~~~~   87 (90)
                      +++++.
T Consensus       299 I~~A~e  304 (502)
T KOG0574|consen  299 IQDAQE  304 (502)
T ss_pred             HHHHHH
Confidence            666554

>KOG0599|consensus

Probab=99.27  E-value=2.3e-12  Score=73.24  Aligned_cols=71  Identities=30%  Similarity=0.507  Sum_probs=59.8

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCC-CCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPP-PKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQ   71 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~   71 (90)
                      |+|.++.|.+||-.......+..|.+++. ...+-|.+++...+++|.+||+.||.+|.++.+.+.||||..
T Consensus       217 ImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~LaHpff~q  288 (411)
T KOG0599|consen  217 IMYTLLAGCPPFWHRKQMLMLRMIMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALAHPFFIQ  288 (411)
T ss_pred             HHHHHHcCCCchhHHHHHHHHHHHHhcccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcChHHHH
Confidence            47889999999988777777788888765 233446678999999999999999999999999999999953

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.27  E-value=3.4e-12  Score=76.95  Aligned_cols=74  Identities=23%  Similarity=0.429  Sum_probs=54.0

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcC-CC------------------CCC-------CCCCCCCHHHHHHHHHhhccCC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDM-PP------------------PKL-------KNTHKVSPRLQGFLERLLVRDP   54 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~-~~------------------~~~-------~~~~~~~~~~~~~i~~~l~~~p   54 (90)
                      ++|+|++|.+||.+.+.......+... ..                  +..       ..+...++++.+||.+||..+|
T Consensus       260 il~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP  339 (440)
T PTZ00036        260 IIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEP  339 (440)
T ss_pred             HHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCCh
Confidence            478999999999987665554443321 00                  000       0123457899999999999999


Q ss_pred             CCCCCHHHHhcCccccccCC
Q psy10832         55 LQRATAAELLQHPFLRQAGP   74 (90)
Q Consensus        55 ~~R~~~~~l~~~~~~~~~~~   74 (90)
                      .+|+++.+++.||||.....
T Consensus       340 ~~R~ta~e~l~hp~f~~~~~  359 (440)
T PTZ00036        340 LKRLNPIEALADPFFDDLRD  359 (440)
T ss_pred             hHCcCHHHHhCChhHHhhhc
Confidence            99999999999999986543

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.27  E-value=1e-11  Score=71.49  Aligned_cols=82  Identities=27%  Similarity=0.585  Sum_probs=61.4

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCCCcccHH
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPPALLVP   80 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~~~~~~~   80 (90)
                      ++|+|++|.+||.+.+.......+.....+... ...++..+.+++.+||..+|.+||++.+++.|+||..........+
T Consensus       203 il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~~~~~~~  281 (307)
T cd06607         203 TCIELAERKPPLFNMNAMSALYHIAQNDSPTLS-SNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVLRERPPTVIID  281 (307)
T ss_pred             HHHHHHcCCCCCCCccHHHHHHHHhcCCCCCCC-chhhCHHHHHHHHHHhcCChhhCcCHHHHhcChhhcccCCcHHHHH
Confidence            368899999999987776665555544333322 2346889999999999999999999999999999987665544444


Q ss_pred             HHh
Q psy10832         81 LMK   83 (90)
Q Consensus        81 ~~~   83 (90)
                      ...
T Consensus       282 ~~~  284 (307)
T cd06607         282 LIQ  284 (307)
T ss_pred             HHH
Confidence            433

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.26  E-value=5.6e-12  Score=73.04  Aligned_cols=70  Identities=26%  Similarity=0.448  Sum_probs=57.1

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHH-HHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAA-ELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~-~l~~~~~~~~~~   73 (90)
                      ++|+|++|..||.+.+.......+....   ...+..++.++++++.+||..+|.+|+++. +++.|+||....
T Consensus       185 il~el~~G~~pf~~~~~~~~~~~i~~~~---~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~h~~~~~~~  255 (316)
T cd05619         185 LLYEMLIGQSPFHGHDEEELFQSIRMDN---PCYPRWLTREAKDILVKLFVREPERRLGVKGDIRQHPFFREID  255 (316)
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHhCC---CCCCccCCHHHHHHHHHHhccCHhhcCCChHHHHcCcccCCCC
Confidence            4689999999999888777666665542   223456799999999999999999999986 899999998754

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.26  E-value=6.1e-12  Score=73.00  Aligned_cols=70  Identities=23%  Similarity=0.454  Sum_probs=58.3

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCH-----HHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA-----AELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~-----~~l~~~~~~~~~~   73 (90)
                      ++|+|++|..||.+.+.......+...   ....+..++.++.+++.+||..||.+|++.     .+++.||||....
T Consensus       190 il~elltG~~pf~~~~~~~~~~~i~~~---~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~~~  264 (324)
T cd05587         190 LLYEMLAGQPPFDGEDEDELFQSIMEH---NVSYPKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFRRID  264 (324)
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHcC---CCCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcCCCC
Confidence            468999999999998887777777665   333455789999999999999999999975     7999999998754

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.26  E-value=7.4e-12  Score=71.15  Aligned_cols=68  Identities=40%  Similarity=0.755  Sum_probs=51.2

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFL   69 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~   69 (90)
                      ++|+|++|..||...........+.....+... ...++..+.+++.+||..||.+||++.+++.|+||
T Consensus       215 ~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~~  282 (282)
T cd06636         215 TAIEMAEGAPPLCDMHPMRALFLIPRNPPPKLK-SKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI  282 (282)
T ss_pred             HHHHHHhCCCCccccCHHhhhhhHhhCCCCCCc-ccccCHHHHHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence            368899999999876554444333333222222 24578999999999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.25  E-value=7e-12  Score=71.67  Aligned_cols=69  Identities=22%  Similarity=0.423  Sum_probs=50.2

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCC--C-------------------CC------CCCCCCCCHHHHHHHHHhhccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMP--P-------------------PK------LKNTHKVSPRLQGFLERLLVRD   53 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~--~-------------------~~------~~~~~~~~~~~~~~i~~~l~~~   53 (90)
                      ++|+|++|.+||.+.+.......+....  +                   +.      ......++.++++++.+||..|
T Consensus       193 ~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~d  272 (288)
T cd07871         193 ILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYE  272 (288)
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcC
Confidence            3689999999999876655444332100  0                   00      0001245788999999999999


Q ss_pred             CCCCCCHHHHhcCccc
Q psy10832         54 PLQRATAAELLQHPFL   69 (90)
Q Consensus        54 p~~R~~~~~l~~~~~~   69 (90)
                      |.+|+++.++++||||
T Consensus       273 p~~R~t~~~~l~hp~f  288 (288)
T cd07871         273 TKSRISAEAALRHSYF  288 (288)
T ss_pred             cccCCCHHHHhcCCCC
Confidence            9999999999999997

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.25  E-value=4.6e-12  Score=72.73  Aligned_cols=76  Identities=46%  Similarity=0.763  Sum_probs=57.0

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCCCc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPPA   76 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~~~   76 (90)
                      ++|+|++|..||.+.+.......+.....+....+..++...++++.+||..+|..|+++.+++.|+||.......
T Consensus       204 il~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~~~  279 (297)
T cd06656         204 MAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKLAKPLS  279 (297)
T ss_pred             HHHHHHhCCCCCCCCCcchheeeeccCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhccccccc
Confidence            3688999999998765544333333333333334456788999999999999999999999999999999765444

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.25  E-value=8.6e-12  Score=70.12  Aligned_cols=74  Identities=27%  Similarity=0.398  Sum_probs=55.8

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCC-CCCCCCCCCCHHHHHHHHHhhccCCCCCCC---HHHHhcCccccccCC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPP-PKLKNTHKVSPRLQGFLERLLVRDPLQRAT---AAELLQHPFLRQAGP   74 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~---~~~l~~~~~~~~~~~   74 (90)
                      ++|+|++|..||...+.......+..... ........++.++.+++.+||..+|+.|++   +.+++.||||....+
T Consensus       182 il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~~~~~~  259 (260)
T cd05611         182 VIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSHPFFKSINW  259 (260)
T ss_pred             HHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcChHhhcCCC
Confidence            36889999999998777666655544322 111223357899999999999999999994   589999999986543

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.24  E-value=6.5e-12  Score=72.93  Aligned_cols=70  Identities=29%  Similarity=0.485  Sum_probs=58.0

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCC-----CHHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRA-----TAAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~-----~~~~l~~~~~~~~~~   73 (90)
                      ++|+|++|..||.+.+.......+...   ....+..+++++.+++..||..||.+|+     ++.+++.|+||.+..
T Consensus       184 il~ell~g~~Pf~~~~~~~~~~~~~~~---~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~~~  258 (323)
T cd05595         184 VMYEMMCGRLPFYNQDHERLFELILME---EIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSIN  258 (323)
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHhcC---CCCCCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCCcCCCC
Confidence            468999999999988777766666554   2334567899999999999999999998     799999999998654

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.24  E-value=8.9e-12  Score=71.08  Aligned_cols=69  Identities=23%  Similarity=0.387  Sum_probs=51.4

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCC-CC---C--------------------CCCCCCCHHHHHHHHHhhccCCCC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPP-PK---L--------------------KNTHKVSPRLQGFLERLLVRDPLQ   56 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~-~~---~--------------------~~~~~~~~~~~~~i~~~l~~~p~~   56 (90)
                      ++|+|++|.+||.+.+.......+..... +.   .                    .....+++.+++++.+||..||++
T Consensus       198 il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~  277 (290)
T cd07862         198 IFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAK  277 (290)
T ss_pred             HHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchh
Confidence            46899999999998876665555432110 00   0                    001246788899999999999999


Q ss_pred             CCCHHHHhcCccc
Q psy10832         57 RATAAELLQHPFL   69 (90)
Q Consensus        57 R~~~~~l~~~~~~   69 (90)
                      |+++.++++||||
T Consensus       278 R~s~~~~l~hp~f  290 (290)
T cd07862         278 RISAYSALSHPYF  290 (290)
T ss_pred             cCCHHHHhcCCCC
Confidence            9999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>KOG0597|consensus

Probab=99.24  E-value=3.3e-12  Score=78.32  Aligned_cols=69  Identities=33%  Similarity=0.594  Sum_probs=61.6

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCcccccc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQA   72 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~   72 (90)
                      |+|||..|++||.......++..|...   ....|...+.++..|+..+|.+||..|.++.+++.|||.++.
T Consensus       189 ilYE~~~G~PPF~a~si~~Lv~~I~~d---~v~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF~k~~  257 (808)
T KOG0597|consen  189 ILYELYVGQPPFYARSITQLVKSILKD---PVKPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLGHPFWKGK  257 (808)
T ss_pred             HHHHHhcCCCCchHHHHHHHHHHHhcC---CCCCcccccHHHHHHHHHHhhcChhhcccHHHHhcChHHhhh
Confidence            579999999999999988889998887   344456889999999999999999999999999999998864

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.24  E-value=1.9e-11  Score=70.93  Aligned_cols=70  Identities=29%  Similarity=0.476  Sum_probs=57.7

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCH----HHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA----AELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~----~~l~~~~~~~~~~   73 (90)
                      ++|+|++|..||.+.+.......+....   ...+..++..+.+++.+||..+|.+|++.    .+++.|+||....
T Consensus       185 il~ell~g~~pf~~~~~~~~~~~i~~~~---~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~~~~~~~  258 (323)
T cd05575         185 VLYEMLYGLPPFYSRDTAEMYDNILNKP---LRLKPNISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFFSSIN  258 (323)
T ss_pred             hhhhhhcCCCCCCCCCHHHHHHHHHcCC---CCCCCCCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCCCcCCCC
Confidence            4789999999999988777777766552   23345679999999999999999999985    6999999998654

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.24  E-value=4.8e-11  Score=69.40  Aligned_cols=71  Identities=32%  Similarity=0.463  Sum_probs=57.0

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCC----CHHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRA----TAAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~----~~~~l~~~~~~~~~~   73 (90)
                      ++|+|++|..||.+.+.......+..+... ++ ...+++++.+++.+||..||.+|+    ++.+++.|+||....
T Consensus       186 il~elltG~~Pf~~~~~~~~~~~i~~~~~~-~~-~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~~~  260 (330)
T cd05586         186 LVFEMCCGWSPFYAEDTQQMYRNIAFGKVR-FP-KNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFADID  260 (330)
T ss_pred             EEEEeccCCCCCCCCCHHHHHHHHHcCCCC-CC-CccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCccccCCC
Confidence            589999999999998877777676655321 21 234789999999999999999998    689999999998643

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>PTZ00284 protein kinase; Provisional

Probab=99.24  E-value=3e-12  Score=77.55  Aligned_cols=36  Identities=25%  Similarity=0.358  Sum_probs=32.0

Q ss_pred             CHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCC
Q psy10832         39 SPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGP   74 (90)
Q Consensus        39 ~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~   74 (90)
                      ++.+.+||.+||..||.+|+++.++++||||.....
T Consensus       411 ~~~~~dli~~mL~~dP~~R~ta~e~L~Hp~~~~~~~  446 (467)
T PTZ00284        411 DDLLCDLIYGLLHYDRQKRLNARQMTTHPYVLKYYP  446 (467)
T ss_pred             hHHHHHHHHHhCCcChhhCCCHHHHhcCccccccCC
Confidence            456789999999999999999999999999997543

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.24  E-value=1.6e-11  Score=69.05  Aligned_cols=68  Identities=34%  Similarity=0.556  Sum_probs=53.3

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFL   69 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~   69 (90)
                      ++|+|++|..||...........+..... ....+..++..+.+++..||..+|.+||++.+++.|+||
T Consensus       196 il~el~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~  263 (263)
T cd06625         196 TVVEMLTEKPPWAEFEAMAAIFKIATQPT-NPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRHFFV  263 (263)
T ss_pred             HHHHHHhCCCCccccchHHHHHHHhccCC-CCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhCCCC
Confidence            46899999999988765554444433322 233455689999999999999999999999999999997

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.23  E-value=1.6e-11  Score=70.44  Aligned_cols=73  Identities=23%  Similarity=0.387  Sum_probs=52.8

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCC---------------------CCCCC------CCCCCCHHHHHHHHHhhccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMP---------------------PPKLK------NTHKVSPRLQGFLERLLVRD   53 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~---------------------~~~~~------~~~~~~~~~~~~i~~~l~~~   53 (90)
                      ++|+|++|.+||.+.+.......+....                     .+...      ....++++++++|.+||..|
T Consensus       194 ~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~d  273 (301)
T cd07873         194 IFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFE  273 (301)
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCC
Confidence            3689999999999876654443322100                     00000      01246788999999999999


Q ss_pred             CCCCCCHHHHhcCccccccC
Q psy10832         54 PLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus        54 p~~R~~~~~l~~~~~~~~~~   73 (90)
                      |.+|+++.+++.|+||....
T Consensus       274 p~~R~t~~eil~h~~f~~~~  293 (301)
T cd07873         274 GRKRISAEEAMKHPYFHCLG  293 (301)
T ss_pred             cccCcCHHHHhcCccccccc
Confidence            99999999999999998765

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.22  E-value=1.9e-11  Score=69.05  Aligned_cols=68  Identities=37%  Similarity=0.725  Sum_probs=51.1

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFL   69 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~   69 (90)
                      ++|+|++|..||...........+........ ....++.++.+++.+||..+|.+||++.+++.||||
T Consensus       205 ~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~~  272 (272)
T cd06637         205 TAIEMAEGAPPLCDMHPMRALFLIPRNPAPRL-KSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI  272 (272)
T ss_pred             HHHHHHhCCCCccccCHHHHHHHHhcCCCCCC-CCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence            36899999999987655544443333221122 234568899999999999999999999999999997

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.22  E-value=2.6e-11  Score=67.98  Aligned_cols=67  Identities=22%  Similarity=0.366  Sum_probs=54.2

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFL   69 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~   69 (90)
                      ++|+|++|..||...+.......+..+..+.  .+..++..+.+++.+|+..+|.+||++.+++.||||
T Consensus       191 il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~  257 (257)
T cd08223         191 CVYEMATLKHAFNAKDMNSLVYRIIEGKLPP--MPKDYSPELGELIATMLSKRPEKRPSVKSILRQPYI  257 (257)
T ss_pred             HHHHHHcCCCCCCCCCHHHHHHHHHhcCCCC--CccccCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence            3678999999999877766655555543222  235678999999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.22  E-value=2.1e-11  Score=68.71  Aligned_cols=67  Identities=40%  Similarity=0.582  Sum_probs=53.0

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFL   69 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~   69 (90)
                      ++|+|++|..||.+.+.......+.....  ...+..++..+.+++.+||..+|.+||++.+++.|+||
T Consensus       201 il~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~  267 (267)
T cd06628         201 LVVEMLTGKHPFPDCTQLQAIFKIGENAS--PEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKHPFL  267 (267)
T ss_pred             HHHHHhhCCCCCCCccHHHHHHHHhccCC--CcCCcccCHHHHHHHHHHccCCchhCcCHHHHhhCCCC
Confidence            36889999999998766555544444322  22345678999999999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.22  E-value=2.8e-11  Score=68.90  Aligned_cols=82  Identities=27%  Similarity=0.342  Sum_probs=58.1

Q ss_pred             CEEeeecCCCCCCCCCHHHHH---HHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCCC-c
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAM---RRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPP-A   76 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~---~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~~-~   76 (90)
                      ++|+|++|..||.........   ..+.....  ...+..++.++.+++.+||..+|.+||++.+++.|+||...... .
T Consensus       196 il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~~~~~~~~~  273 (286)
T cd06622         196 SILEMALGRYPYPPETYANIFAQLSAIVDGDP--PTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKYKNADV  273 (286)
T ss_pred             HHHHHHhCCCCCCCcchhhHHHHHHHHhhcCC--CCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcChhhhhccCCcc
Confidence            368899999999765443332   22333322  22344589999999999999999999999999999999876533 3


Q ss_pred             ccHHHHhh
Q psy10832         77 LLVPLMKG   84 (90)
Q Consensus        77 ~~~~~~~~   84 (90)
                      ...+++.+
T Consensus       274 ~~~~~~~~  281 (286)
T cd06622         274 DMAEWVTG  281 (286)
T ss_pred             chHHHHHH
Confidence            44444433

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.22  E-value=2e-11  Score=68.42  Aligned_cols=67  Identities=19%  Similarity=0.287  Sum_probs=55.0

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFL   69 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~   69 (90)
                      ++|+|++|..||...........+..+..+  ..+..++.++.+++..|+..+|.+||++.+++.|+||
T Consensus       190 i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~~~~  256 (256)
T cd08218         190 VLYEMCTLKHAFEAGNMKNLVLKIIRGSYP--PVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEKNFI  256 (256)
T ss_pred             HHHHHHcCCCCccCCCHHHHHHHHhcCCCC--CCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhCcCC
Confidence            367899999999988777766666655432  2245678999999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.22  E-value=5.4e-11  Score=69.50  Aligned_cols=72  Identities=28%  Similarity=0.508  Sum_probs=55.9

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCC-CCCCCCCCCCHHHHHHHHHhhccCCCCCCC-HHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPP-PKLKNTHKVSPRLQGFLERLLVRDPLQRAT-AAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~-~~~l~~~~~~~~~~   73 (90)
                      ++|+|++|..||.+.+.......+..... ...+....+++++.++|.+|+. +|.+|++ +.+++.||||....
T Consensus       219 il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~~~~~~  292 (350)
T cd05573         219 ILYEMLYGFPPFYSDTLQETYNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPFFKGID  292 (350)
T ss_pred             hhhhhccCCCCCCCCCHHHHHHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCCcCCCC
Confidence            57999999999999877666666655211 1222223469999999999997 9999999 99999999998653

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>KOG0585|consensus

Probab=99.21  E-value=1.9e-11  Score=73.51  Aligned_cols=72  Identities=26%  Similarity=0.551  Sum_probs=61.4

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      +||.|+.|+.||.+.....+..+|.+... .++....+.++++++|.++|.+||+.|.++.++..|||....+
T Consensus       308 TLYCllfG~~PF~~~~~~~l~~KIvn~pL-~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~g  379 (576)
T KOG0585|consen  308 TLYCLLFGQLPFFDDFELELFDKIVNDPL-EFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRDG  379 (576)
T ss_pred             hHHHhhhccCCcccchHHHHHHHHhcCcc-cCCCcccccHHHHHHHHHHhhcChhheeehhhheecceeccCC
Confidence            47999999999999999999999987732 2222234789999999999999999999999999999998764

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.21  E-value=1.6e-11  Score=71.27  Aligned_cols=70  Identities=20%  Similarity=0.382  Sum_probs=58.3

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCC-----HHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRAT-----AAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~-----~~~l~~~~~~~~~~   73 (90)
                      ++|+|++|..||.+.+.......+...   ....+..++.++.+++.+||..+|.+|++     ..+++.|+||....
T Consensus       190 il~elltg~~Pf~~~~~~~~~~~i~~~---~~~~p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~~~~  264 (323)
T cd05616         190 LLYEMLAGQAPFEGEDEDELFQSIMEH---NVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYID  264 (323)
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHhC---CCCCCCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcCCCC
Confidence            468999999999998887777777665   33345678999999999999999999997     47899999998644

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.21  E-value=7.1e-12  Score=71.53  Aligned_cols=72  Identities=25%  Similarity=0.433  Sum_probs=53.6

Q ss_pred             CEEeeecCCCCCCCCCHHH----HHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCC-----HHHHhcCccccc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQ----AMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRAT-----AAELLQHPFLRQ   71 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~----~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~-----~~~l~~~~~~~~   71 (90)
                      ++|+|++|..||.+.....    ....+...   ....+..++.++.+++.+||..||.+|++     ++++++|+||..
T Consensus       190 il~el~~g~~pf~~~~~~~~~~~~~~~~~~~---~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~  266 (285)
T cd05631         190 LIYEMIQGQSPFRKRKERVKREEVDRRVKED---QEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKN  266 (285)
T ss_pred             HHHHHHhCCCCCCCCCcchhHHHHHHHhhcc---cccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcC
Confidence            4689999999998754322    22222222   23345568999999999999999999996     899999999997


Q ss_pred             cCCC
Q psy10832         72 AGPP   75 (90)
Q Consensus        72 ~~~~   75 (90)
                      ....
T Consensus       267 ~~~~  270 (285)
T cd05631         267 INFK  270 (285)
T ss_pred             CCHH
Confidence            6533

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.20  E-value=3.2e-11  Score=71.29  Aligned_cols=72  Identities=19%  Similarity=0.447  Sum_probs=57.0

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCC-CCCCCCCCCCHHHHHHHHHhhccCCCC--CCCHHHHhcCcccccc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPP-PKLKNTHKVSPRLQGFLERLLVRDPLQ--RATAAELLQHPFLRQA   72 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~p~~--R~~~~~l~~~~~~~~~   72 (90)
                      ++|+|++|..||.+.+.......+..... ..++....++.+++++|.+||..+|.+  |+++.+++.|+||...
T Consensus       236 ilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~~~~~  310 (370)
T cd05596         236 FLYEMLVGDTPFYADSLVGTYSKIMDHKNSLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPFFKND  310 (370)
T ss_pred             HHHHHHhCCCCcCCCCHHHHHHHHHcCCCcCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCcccCCC
Confidence            36899999999999887777777665422 222223357999999999999988887  9999999999999864

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.20  E-value=2.6e-11  Score=68.98  Aligned_cols=68  Identities=34%  Similarity=0.656  Sum_probs=51.7

Q ss_pred             EEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccc
Q psy10832          2 VVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFL   69 (90)
Q Consensus         2 l~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~   69 (90)
                      +|+|++|..||...........+.....+....+..++..+.+++.+||..+|++||++.+++.|+||
T Consensus       219 ~~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~~  286 (286)
T cd06638         219 AIELGDGDPPLADLHPMRALFKIPRNPPPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI  286 (286)
T ss_pred             HHHHhcCCCCCCCCchhHHHhhccccCCCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcccC
Confidence            57899999999877655444443333222233344568899999999999999999999999999996

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.20  E-value=3.2e-11  Score=67.78  Aligned_cols=69  Identities=38%  Similarity=0.623  Sum_probs=51.5

Q ss_pred             CEEeeecCCCCCCCC-CHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccc
Q psy10832          1 MVVEMVDGEPPFFNE-PPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFL   69 (90)
Q Consensus         1 il~~~~~g~~p~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~   69 (90)
                      ++|+|++|..||... ........+.....+..+.....+....+++..|+..+|.+|+++.+++.|+|+
T Consensus       195 il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~  264 (264)
T cd06626         195 VVLEMATGKRPWSELDNEFQIMFHVGAGHKPPIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQHPFV  264 (264)
T ss_pred             HHHHHHhCCCCccCCcchHHHHHHHhcCCCCCCCcccccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence            367899999999765 333344444443333333333458999999999999999999999999999996

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.20  E-value=2.3e-11  Score=70.05  Aligned_cols=74  Identities=23%  Similarity=0.329  Sum_probs=54.2

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCC-C---------------CCCC-----------CCCCCHHHHHHHHHhhccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPP-P---------------KLKN-----------THKVSPRLQGFLERLLVRD   53 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~-~---------------~~~~-----------~~~~~~~~~~~i~~~l~~~   53 (90)
                      ++|+|++|.+||.+.+.......+..... +               ....           ....++.+.++|.+||..|
T Consensus       198 il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~d  277 (309)
T cd07845         198 ILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYD  277 (309)
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCC
Confidence            36899999999998877666555443100 0               0000           0125788999999999999


Q ss_pred             CCCCCCHHHHhcCccccccCC
Q psy10832         54 PLQRATAAELLQHPFLRQAGP   74 (90)
Q Consensus        54 p~~R~~~~~l~~~~~~~~~~~   74 (90)
                      |++|+++.+++.|+||.+...
T Consensus       278 p~~R~t~~~il~h~~f~~~~~  298 (309)
T cd07845         278 PKKRATAEEALESSYFKEKPL  298 (309)
T ss_pred             hhhCcCHHHHhcChhhccCCC
Confidence            999999999999999986543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.20  E-value=3.8e-11  Score=69.45  Aligned_cols=80  Identities=30%  Similarity=0.622  Sum_probs=60.2

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCCCcccHH
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPPALLVP   80 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~~~~~~~   80 (90)
                      ++|+|++|.+||...+.......+.....+... ...++....+++.+||..+|..||++.+++.|+||........+.+
T Consensus       209 il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~~~~~~~~~~~~~~  287 (313)
T cd06633         209 TCIELAERKPPLFNMNAMSALYHIAQNDSPTLQ-SNEWTDSFRGFVDYCLQKIPQERPASAELLRHDFVRRDRPARVLID  287 (313)
T ss_pred             HHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCC-ccccCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCCchhHHHHH
Confidence            367899999999887766666555544332222 2356788999999999999999999999999999997665444444


Q ss_pred             H
Q psy10832         81 L   81 (90)
Q Consensus        81 ~   81 (90)
                      .
T Consensus       288 ~  288 (313)
T cd06633         288 L  288 (313)
T ss_pred             H
Confidence            3

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>KOG0660|consensus

Probab=99.20  E-value=1.8e-11  Score=71.05  Aligned_cols=76  Identities=33%  Similarity=0.543  Sum_probs=58.1

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcC-----------------------CC--CCCC---CCCCCCHHHHHHHHHhhcc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDM-----------------------PP--PKLK---NTHKVSPRLQGFLERLLVR   52 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~-----------------------~~--~~~~---~~~~~~~~~~~~i~~~l~~   52 (90)
                      |+.||++|++-|.|.+...++..|..-                       .+  +..+   .....++.+.+++++||..
T Consensus       217 I~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~f  296 (359)
T KOG0660|consen  217 ILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVF  296 (359)
T ss_pred             HHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhcc
Confidence            356999999999998877766665521                       00  0000   1246789999999999999


Q ss_pred             CCCCCCCHHHHhcCccccccCCCc
Q psy10832         53 DPLQRATAAELLQHPFLRQAGPPA   76 (90)
Q Consensus        53 ~p~~R~~~~~l~~~~~~~~~~~~~   76 (90)
                      ||.+|+++++++.|||+......+
T Consensus       297 dP~kRita~eAL~hPYl~~~hdp~  320 (359)
T KOG0660|consen  297 DPKKRITAEEALAHPYLAPYHDPE  320 (359)
T ss_pred             CccccCCHHHHhcChhhhhhcCCc
Confidence            999999999999999999876554

>KOG0582|consensus

Probab=99.20  E-value=3.1e-11  Score=72.05  Aligned_cols=74  Identities=31%  Similarity=0.578  Sum_probs=55.6

Q ss_pred             EeeecCCCCCCCCCHHHHHHHhhcCCCCCCC-------CCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCCC
Q psy10832          3 VEMVDGEPPFFNEPPLQAMRRIRDMPPPKLK-------NTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPP   75 (90)
Q Consensus         3 ~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~-------~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~~   75 (90)
                      .|+.+|..||....+...+..-.++.+|...       ....++..++.++..||++||++||+++++++|+||+.....
T Consensus       223 ~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~~k~~  302 (516)
T KOG0582|consen  223 CELAHGHAPFSKYPPMKVLLLTLQNDPPTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKKAKSK  302 (516)
T ss_pred             HHHhcCCCCcccCChHHHHHHHhcCCCCCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhhccch
Confidence            4789999999987655544443444444221       123467789999999999999999999999999999987644


Q ss_pred             c
Q psy10832         76 A   76 (90)
Q Consensus        76 ~   76 (90)
                      .
T Consensus       303 ~  303 (516)
T KOG0582|consen  303 E  303 (516)
T ss_pred             h
Confidence            3

>KOG0604|consensus

Probab=99.19  E-value=8.8e-12  Score=71.53  Aligned_cols=73  Identities=26%  Similarity=0.405  Sum_probs=55.9

Q ss_pred             CEEeeecCCCCCCCCCH----HHHHHHhhcCCC-CCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPP----LQAMRRIRDMPP-PKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~----~~~~~~i~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      ++|.|++|.+||-+...    ...-.+|..++. ...+-|..+|+.++++|+++|..+|.+|.++.++|.|||+....
T Consensus       252 imYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~~  329 (400)
T KOG0604|consen  252 IMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQYE  329 (400)
T ss_pred             HHHHhhcCCCcccccCCccCChhHHhHhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhcccc
Confidence            57899999999976422    223355666643 11223567899999999999999999999999999999998654

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.19  E-value=3.1e-11  Score=67.11  Aligned_cols=68  Identities=38%  Similarity=0.779  Sum_probs=51.6

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCcc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPF   68 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~   68 (90)
                      ++|+|++|..||...+.......+.....+.......++..+.+++..|+..||..|+++.+++.|||
T Consensus       186 il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~~~  253 (253)
T cd05122         186 TAIELAEGKPPYSELPPMKALFKIATNGPPGLRNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKHPF  253 (253)
T ss_pred             HHHHHHhCCCCCCCCchHHHHHHHHhcCCCCcCcccccCHHHHHHHHHHccCChhhCCCHHHHhcCCC
Confidence            36789999999988755554444443333333333334889999999999999999999999999998

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.19  E-value=2.8e-11  Score=67.90  Aligned_cols=72  Identities=29%  Similarity=0.504  Sum_probs=55.7

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCH---HHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA---AELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~---~~l~~~~~~~~~~   73 (90)
                      ++|++++|..||...........+..... .......++..+.+++..||..+|..||++   .++++|+||.+..
T Consensus       190 ~~~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~~~~~  264 (265)
T cd05579         190 ILYEFLVGIPPFHGETPEEIFQNILNGKI-EWPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFFKGID  264 (265)
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHhcCCc-CCCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcCccccCCC
Confidence            36789999999998877766666655422 121112348999999999999999999998   9999999998653

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.19  E-value=6.6e-11  Score=68.86  Aligned_cols=70  Identities=30%  Similarity=0.534  Sum_probs=53.2

Q ss_pred             CEEeeecCCCCCCCC----CHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCC-----CHHHHhcCccccc
Q psy10832          1 MVVEMVDGEPPFFNE----PPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRA-----TAAELLQHPFLRQ   71 (90)
Q Consensus         1 il~~~~~g~~p~~~~----~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~-----~~~~l~~~~~~~~   71 (90)
                      ++|+|++|..||...    ........+...   ....+..++..+.+++.+||..||.+|+     +++++++|+||..
T Consensus       196 il~elltg~~pf~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~  272 (332)
T cd05614         196 LIFELLTGASPFTLEGERNTQSEVSRRILKC---DPPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKG  272 (332)
T ss_pred             hhhhhhcCCCCCCCCCCCCCHHHHHHHHhcC---CCCCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCC
Confidence            579999999999743    233333444443   2233456899999999999999999999     7889999999986


Q ss_pred             cC
Q psy10832         72 AG   73 (90)
Q Consensus        72 ~~   73 (90)
                      ..
T Consensus       273 ~~  274 (332)
T cd05614         273 LD  274 (332)
T ss_pred             CC
Confidence            43

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.19  E-value=3.3e-11  Score=67.84  Aligned_cols=71  Identities=34%  Similarity=0.676  Sum_probs=51.5

Q ss_pred             CEEeeecCCCCCCCC-----CHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCcccccc
Q psy10832          1 MVVEMVDGEPPFFNE-----PPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQA   72 (90)
Q Consensus         1 il~~~~~g~~p~~~~-----~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~   72 (90)
                      ++|+|++|..||...     ........+.....+.... ..++.++.++|..||..+|.+||++.+++.||||+..
T Consensus       188 ~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~~~~  263 (265)
T cd06605         188 SLIELATGRFPYPPENDPPDGIFELLQYIVNEPPPRLPS-GKFSPDFQDFVNLCLIKDPRERPSYKELLEHPFIKKY  263 (265)
T ss_pred             HHHHHHhCCCCCCccccccccHHHHHHHHhcCCCCCCCh-hhcCHHHHHHHHHHcCCCchhCcCHHHHhhCchhhcc
Confidence            367899999999764     2333334444333222211 1278999999999999999999999999999999753

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.18  E-value=3.7e-11  Score=70.00  Aligned_cols=39  Identities=26%  Similarity=0.609  Sum_probs=34.8

Q ss_pred             CCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCCC
Q psy10832         37 KVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPP   75 (90)
Q Consensus        37 ~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~~   75 (90)
                      .+++++++|+.+||..||++|+++.+++.|+||+.....
T Consensus       272 ~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~~~  310 (331)
T cd06649         272 VFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKRSEVE  310 (331)
T ss_pred             cccHHHHHHHHHHccCCcccCCCHHHHhcChHHhhcccc
Confidence            467899999999999999999999999999999875433

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.18  E-value=2.9e-11  Score=70.28  Aligned_cols=38  Identities=37%  Similarity=0.570  Sum_probs=34.2

Q ss_pred             CCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCC
Q psy10832         37 KVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGP   74 (90)
Q Consensus        37 ~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~   74 (90)
                      ..++.+.+++.+||..+|.+|+++.+++.||||.....
T Consensus       261 ~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~~~  298 (338)
T cd07859         261 NADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAK  298 (338)
T ss_pred             CCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhhcCc
Confidence            45788999999999999999999999999999987553

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.18  E-value=2.5e-11  Score=67.77  Aligned_cols=65  Identities=31%  Similarity=0.599  Sum_probs=53.4

Q ss_pred             EEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCH---HHHhcCccc
Q psy10832          2 VVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA---AELLQHPFL   69 (90)
Q Consensus         2 l~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~---~~l~~~~~~   69 (90)
                      +|++++|..||...........+...   ....+...+....+++.+||..+|+.|++.   .++++|+||
T Consensus       183 ~~~l~~g~~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~~~f  250 (250)
T cd05123         183 LYEMLTGKPPFYAEDRKEIYEKILKD---PLRFPEFLSPEARDLISGLLQKDPTKRLGSGGAEEIKAHPFF  250 (250)
T ss_pred             HHHHHHCCCCCCCCCHHHHHHHHhcC---CCCCCCCCCHHHHHHHHHHhcCCHhhCCCcccHHHHHhCCCC
Confidence            57899999999887765555555543   344455678999999999999999999999   999999998

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.18  E-value=2.8e-11  Score=68.84  Aligned_cols=69  Identities=26%  Similarity=0.404  Sum_probs=49.1

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcC-CCCC-------------------C------CCCCCCCHHHHHHHHHhhccCC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDM-PPPK-------------------L------KNTHKVSPRLQGFLERLLVRDP   54 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~-~~~~-------------------~------~~~~~~~~~~~~~i~~~l~~~p   54 (90)
                      ++|+|++|..||.+.+.......+... ..+.                   .      .....++++++++|.+||..||
T Consensus       190 il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P  269 (284)
T cd07860         190 IFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDP  269 (284)
T ss_pred             HHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCc
Confidence            368999999999887654433332210 0000                   0      0012467889999999999999


Q ss_pred             CCCCCHHHHhcCccc
Q psy10832         55 LQRATAAELLQHPFL   69 (90)
Q Consensus        55 ~~R~~~~~l~~~~~~   69 (90)
                      .+|+++.+++.||||
T Consensus       270 ~~Rpt~~~~l~~~~f  284 (284)
T cd07860         270 NKRISAKAALAHPFF  284 (284)
T ss_pred             ccCCCHHHHhcCCCC
Confidence            999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.18  E-value=3.8e-11  Score=67.27  Aligned_cols=67  Identities=21%  Similarity=0.309  Sum_probs=53.0

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFL   69 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~   69 (90)
                      ++|+|++|..||...+.......+......  ......+.++.+++.+|+..+|++||++.+++.|+||
T Consensus       191 il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~~~~  257 (257)
T cd08225         191 VLYELCTLKHPFEGNNLHQLVLKICQGYFA--PISPNFSRDLRSLISQLFKVSPRDRPSITSILKRPFL  257 (257)
T ss_pred             HHHHHHhCCCCCCCccHHHHHHHHhcccCC--CCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhCCCC
Confidence            357899999999887766665555544322  1234568899999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.18  E-value=4.3e-11  Score=68.89  Aligned_cols=74  Identities=24%  Similarity=0.368  Sum_probs=56.8

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCC---HHHHhcCccccccCC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRAT---AAELLQHPFLRQAGP   74 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~---~~~l~~~~~~~~~~~   74 (90)
                      ++|+|++|..||.+.........+..............+.++.+++.+||..+|..|++   +.+++.|+||.....
T Consensus       205 vl~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~~~~  281 (305)
T cd05609         205 ILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLGLDW  281 (305)
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHhcccCCCCccccCCHHHHHHHHHHhccChhhccCccCHHHHHhCccccCCCH
Confidence            36889999999998877766666555432222222357899999999999999999997   789999999976553

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.18  E-value=2.8e-11  Score=68.73  Aligned_cols=76  Identities=30%  Similarity=0.499  Sum_probs=57.8

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCCCccc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPPALL   78 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~~~~~   78 (90)
                      ++|+|++|..||...........+.....+  ..+...+..+.+++.+||..+|.+||++.+++.|+||.........
T Consensus       190 il~el~tg~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~~~~~  265 (277)
T cd06640         190 TAIELAKGEPPNSDMHPMRVLFLIPKNNPP--TLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKHKFIVKNAKKTSY  265 (277)
T ss_pred             HHHHHHHCCCCCCCcChHhHhhhhhcCCCC--CCchhhhHHHHHHHHHHcccCcccCcCHHHHHhChHhhhcchhhhH
Confidence            368999999999887666555544333222  2233567889999999999999999999999999999877655433

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.18  E-value=3.2e-11  Score=70.54  Aligned_cols=76  Identities=30%  Similarity=0.536  Sum_probs=54.4

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCC-CC---------------------C------CCCCCCCHHHHHHHHHhhcc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPP-PK---------------------L------KNTHKVSPRLQGFLERLLVR   52 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~-~~---------------------~------~~~~~~~~~~~~~i~~~l~~   52 (90)
                      ++|+|++|..||.+.+.......+..... +.                     .      ......+..+.+++.+||..
T Consensus       205 ~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~  284 (343)
T cd07851         205 IMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVL  284 (343)
T ss_pred             HHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCC
Confidence            36889999999988765544443322100 00                     0      00123588999999999999


Q ss_pred             CCCCCCCHHHHhcCccccccCCCc
Q psy10832         53 DPLQRATAAELLQHPFLRQAGPPA   76 (90)
Q Consensus        53 ~p~~R~~~~~l~~~~~~~~~~~~~   76 (90)
                      +|.+||++.+++.|+||.......
T Consensus       285 ~P~~Rpt~~ell~h~~~~~~~~~~  308 (343)
T cd07851         285 DPDKRITAAEALAHPYLAEYHDPE  308 (343)
T ss_pred             ChhhCCCHHHHhcCCCccccCCCc
Confidence            999999999999999999766543

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.18  E-value=3.8e-11  Score=68.81  Aligned_cols=75  Identities=31%  Similarity=0.540  Sum_probs=54.8

Q ss_pred             CEEeeecCCCCCCCCC-HHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCCC
Q psy10832          1 MVVEMVDGEPPFFNEP-PLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPP   75 (90)
Q Consensus         1 il~~~~~g~~p~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~~   75 (90)
                      ++|+|++|..||.... .......+.....+.......++.++.+++.+||..+|.+||++.+++.|+||......
T Consensus       207 il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~~  282 (296)
T cd06618         207 SLVELATGQFPYKNCKTEFEVLTKILQEEPPSLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFIRRYETA  282 (296)
T ss_pred             HHHHHHhCCCCCCcchhHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhccchh
Confidence            3689999999997643 23333344433333333233478899999999999999999999999999999975543

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.17  E-value=2.8e-11  Score=70.11  Aligned_cols=70  Identities=27%  Similarity=0.461  Sum_probs=56.8

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCH-HHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA-AELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~-~~l~~~~~~~~~~   73 (90)
                      ++|+|++|..||.+.+.......+...   ....+..++.++.+++..||..+|.+|++. .+++.|+||....
T Consensus       185 il~ell~G~~Pf~~~~~~~~~~~i~~~---~~~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~h~~~~~~~  255 (316)
T cd05592         185 LLYEMLIGQSPFHGEDEDELFDSILND---RPHFPRWISKEAKDCLSKLFERDPTKRLGVDGDIRQHPFFRGID  255 (316)
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHcC---CCCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCcccCCCC
Confidence            468999999999998877776666554   223345689999999999999999999985 5889999998643

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.17  E-value=8.9e-11  Score=68.37  Aligned_cols=73  Identities=18%  Similarity=0.386  Sum_probs=55.8

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCC----CCCC-CCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPP----PKLK-NTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~----~~~~-~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      ++|+|++|..||.+.+.......+.....    +... ....++.++.+++.+||..+|.+|+++.+++.|+||....
T Consensus       187 il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~~~~~~~  264 (333)
T cd05600         187 MLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNHPFFKEVD  264 (333)
T ss_pred             HHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhCcccCCCC
Confidence            47999999999998877766655543221    1111 0124689999999999999999999999999999998653

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.17  E-value=4.5e-11  Score=67.74  Aligned_cols=72  Identities=29%  Similarity=0.532  Sum_probs=54.4

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      ++|+|++|..||.+.........+.....+... ...++.++.+++.+||..||.+|+++.+++.|+||....
T Consensus       191 ~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~~~~~~~  262 (277)
T cd06917         191 TIYEMATGNPPYSDVDAFRAMMLIPKSKPPRLE-DNGYSKLLREFVAACLDEEPKERLSAEELLKSKWIKAHS  262 (277)
T ss_pred             HHHHHHhCCCCCCCCChhhhhhccccCCCCCCC-cccCCHHHHHHHHHHcCCCcccCcCHHHHhhChHhhccc
Confidence            368899999999887665544443333222222 123688999999999999999999999999999998654

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.17  E-value=2.5e-11  Score=76.46  Aligned_cols=72  Identities=35%  Similarity=0.509  Sum_probs=58.5

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCcccccc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQA   72 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~   72 (90)
                      ++|||++|.+||.+.........+.....+.......++..+.+++..||..+|.+|+++.+++.|+||...
T Consensus       569 il~ElltG~~pf~~~~~~~~~~~il~~~~~~p~~~~~~~~~~~~~l~~lL~~dP~~R~ta~e~l~h~~~~~~  640 (669)
T cd05610         569 CLFEFLTGIPPFNDETPQQVFQNILNRDIPWPEGEEKLSVNAQNAIEILLTMDPTKRAGLKELKQHPLFHGV  640 (669)
T ss_pred             HHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCcccccCCHHHHHHHHHHcccChhHCcCHHHHHhCHhhcCC
Confidence            478999999999998888777777654332222233568889999999999999999999999999999865

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.17  E-value=3.6e-11  Score=69.39  Aligned_cols=74  Identities=30%  Similarity=0.468  Sum_probs=57.1

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCC----HHHHhcCccccccCCC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRAT----AAELLQHPFLRQAGPP   75 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~----~~~l~~~~~~~~~~~~   75 (90)
                      ++|+|++|..||.+.+.......+..... ........+..+.+++..||..+|..|++    +.+++.|+||.+..+.
T Consensus       221 ll~~l~~g~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~~~~~~~  298 (316)
T cd05574         221 LLYEMLYGTTPFKGSNRDETFSNILKKEV-TFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFRGVNWA  298 (316)
T ss_pred             HHHHHhhCCCCCCCCchHHHHHHHhcCCc-cCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchhhcCChh
Confidence            36899999999998776666555554322 22222236899999999999999999999    9999999999976543

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.17  E-value=6e-11  Score=69.83  Aligned_cols=35  Identities=29%  Similarity=0.491  Sum_probs=31.7

Q ss_pred             CHHHHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832         39 SPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus        39 ~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      +..++++|.+||..||.+|+++.+++.||||....
T Consensus       291 ~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~~~~  325 (364)
T cd07875         291 ASQARDLLSKMLVIDASKRISVDEALQHPYINVWY  325 (364)
T ss_pred             cHHHHHHHHHhcCcCcccCCCHHHHhcCccccccc
Confidence            46789999999999999999999999999997643

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.17  E-value=3.1e-11  Score=68.46  Aligned_cols=69  Identities=26%  Similarity=0.383  Sum_probs=49.5

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCC---------------CCCCCC-----------CCCCCHHHHHHHHHhhccCC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMP---------------PPKLKN-----------THKVSPRLQGFLERLLVRDP   54 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~---------------~~~~~~-----------~~~~~~~~~~~i~~~l~~~p   54 (90)
                      ++|+|++|.+||.+.+.......+....               ......           ...++.++.+++.+||..+|
T Consensus       188 ~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P  267 (282)
T cd07831         188 VFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDP  267 (282)
T ss_pred             HHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCc
Confidence            3688999999998876554433332100               000000           12457899999999999999


Q ss_pred             CCCCCHHHHhcCccc
Q psy10832         55 LQRATAAELLQHPFL   69 (90)
Q Consensus        55 ~~R~~~~~l~~~~~~   69 (90)
                      .+|+++.+++.|+||
T Consensus       268 ~~R~~~~~~l~~~~~  282 (282)
T cd07831         268 DERITAKQALRHPYF  282 (282)
T ss_pred             ccccCHHHHhhCCCC
Confidence            999999999999997

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>KOG0696|consensus

Probab=99.17  E-value=2.3e-11  Score=72.65  Aligned_cols=72  Identities=24%  Similarity=0.434  Sum_probs=63.4

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCH-----HHHhcCccccccCCC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA-----AELLQHPFLRQAGPP   75 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~-----~~l~~~~~~~~~~~~   75 (90)
                      +||||+.|++||++++...+...|..-   ...+|..+|.++.++++..|.+.|.+|+.+     .++..|+||....+.
T Consensus       539 LLyEmlaGQpPFdGeDE~elF~aI~eh---nvsyPKslSkEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~iDWe  615 (683)
T KOG0696|consen  539 LLYEMLAGQPPFDGEDEDELFQAIMEH---NVSYPKSLSKEAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFRRIDWE  615 (683)
T ss_pred             HHHHHHcCCCCCCCCCHHHHHHHHHHc---cCcCcccccHHHHHHHHHHhhcCCccccCCCCccccchhhCcchhhccHH
Confidence            479999999999999999999999877   566678899999999999999999999873     579999999976644

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.16  E-value=2.8e-11  Score=69.76  Aligned_cols=73  Identities=22%  Similarity=0.395  Sum_probs=52.3

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcC---------------------CCCCC------CCCCCCCHHHHHHHHHhhccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDM---------------------PPPKL------KNTHKVSPRLQGFLERLLVRD   53 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~---------------------~~~~~------~~~~~~~~~~~~~i~~~l~~~   53 (90)
                      ++|+|++|.+||.+.+.......+...                     ..+..      .....++.++++++.+||..|
T Consensus       194 il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  273 (309)
T cd07872         194 IFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYE  273 (309)
T ss_pred             HHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCC
Confidence            468999999999887654443332210                     00000      011246789999999999999


Q ss_pred             CCCCCCHHHHhcCccccccC
Q psy10832         54 PLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus        54 p~~R~~~~~l~~~~~~~~~~   73 (90)
                      |.+|+++.+++.|+||....
T Consensus       274 p~~R~t~~e~l~h~~~~~~~  293 (309)
T cd07872         274 SKKRISAEEAMKHAYFRSLG  293 (309)
T ss_pred             hhhCCCHHHHhcChhhhhcc
Confidence            99999999999999999754

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.16  E-value=4.1e-11  Score=68.50  Aligned_cols=70  Identities=27%  Similarity=0.546  Sum_probs=56.2

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCC-----CHHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRA-----TAAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~-----~~~~l~~~~~~~~~~   73 (90)
                      ++|+|++|..||...........+..+   ....+..++..+++++.+||..+|.+|+     ++.+++.|+||....
T Consensus       187 il~~l~~g~~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~  261 (290)
T cd05580         187 LIYEMLAGYPPFFDDNPIQIYEKILEG---KVRFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAGID  261 (290)
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHhcC---CccCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCcccccCC
Confidence            368899999999887766555555544   2333456799999999999999999999     799999999998654

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.16  E-value=6.3e-11  Score=66.35  Aligned_cols=67  Identities=24%  Similarity=0.334  Sum_probs=54.0

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFL   69 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~   69 (90)
                      ++|+|++|..||...+.......+.....+..  +..++.++.+++.+|+..+|++||++.+++.|+|+
T Consensus       190 il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~  256 (256)
T cd08529         190 VLYECCTGKHPFDANNQGALILKIIRGVFPPV--SQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRNPSL  256 (256)
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC--ccccCHHHHHHHHHHccCCcccCcCHHHHhhCCCC
Confidence            36789999999998877666666655533222  23678999999999999999999999999999985

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.16  E-value=2.3e-11  Score=71.36  Aligned_cols=71  Identities=28%  Similarity=0.352  Sum_probs=52.4

Q ss_pred             CEEeeecCCCCCCCCCH---HHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPP---LQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      ++|+|++|..||.....   ......+....  ....+..++.+++++|.+||..||++|+++.++++|+||.+..
T Consensus       262 il~el~~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~~~~  335 (353)
T PLN00034        262 SILEFYLGRFPFGVGRQGDWASLMCAICMSQ--PPEAPATASREFRHFISCCLQREPAKRWSAMQLLQHPFILRAQ  335 (353)
T ss_pred             HHHHHHhCCCCCCCCCCccHHHHHHHHhccC--CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcCcccccCC
Confidence            36899999999974322   22222332222  2223456789999999999999999999999999999999754

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.16  E-value=3.7e-11  Score=67.97  Aligned_cols=65  Identities=29%  Similarity=0.585  Sum_probs=52.6

Q ss_pred             EEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCH----HHHhcCccc
Q psy10832          2 VVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA----AELLQHPFL   69 (90)
Q Consensus         2 l~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~----~~l~~~~~~   69 (90)
                      +|++++|..||...........+...   ....+..+++.+.+++..||..+|.+||++    .++++|+||
T Consensus       212 l~~l~~g~~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~  280 (280)
T cd05581         212 IYQMLTGKPPFRGSNEYLTFQKILKL---EYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF  280 (280)
T ss_pred             HHHHHhCCCCCCCccHHHHHHHHHhc---CCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence            57889999999987765555555433   333445678999999999999999999999    999999997

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.16  E-value=8.2e-11  Score=66.85  Aligned_cols=74  Identities=31%  Similarity=0.497  Sum_probs=57.5

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCCCc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPPA   76 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~~~   76 (90)
                      ++|+|++|..||...........+.....+.  ....++.++.+++..|+..+|.+||++.+++.|+||.....+.
T Consensus       190 ~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~~~~~~~~  263 (277)
T cd06641         190 TAIELAKGEPPHSELHPMKVLFLIPKNNPPT--LEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFIVRFAKKT  263 (277)
T ss_pred             HHHHHHcCCCCCCccchHHHHHHHhcCCCCC--CCcccCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhhhhhcc
Confidence            3678999999998776655555554443222  2345789999999999999999999999999999999876554

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.16  E-value=3.9e-11  Score=68.40  Aligned_cols=76  Identities=24%  Similarity=0.472  Sum_probs=53.7

Q ss_pred             CEEeeecCCCCCCCCCH-HHHHHHhhcCCCCCCC--CCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCCCc
Q psy10832          1 MVVEMVDGEPPFFNEPP-LQAMRRIRDMPPPKLK--NTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPPA   76 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~-~~~~~~i~~~~~~~~~--~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~~~   76 (90)
                      ++|+|++|..||..... ......+.....+...  .+..++.++.+|+.+||..+|.+||++.+++.|+||.......
T Consensus       199 il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~~~~~~~  277 (288)
T cd06616         199 TLYEVATGKFPYPKWNSVFDQLTQVVKGDPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEHPFIKDYEERN  277 (288)
T ss_pred             HHHHHHhCCCCchhcchHHHHHhhhcCCCCCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhchhhcc
Confidence            35789999999987542 2222333223222222  1234789999999999999999999999999999998755433

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.16  E-value=4.9e-11  Score=69.29  Aligned_cols=70  Identities=21%  Similarity=0.442  Sum_probs=58.1

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCC-----HHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRAT-----AAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~-----~~~l~~~~~~~~~~   73 (90)
                      ++|+|++|..||.+.+.......+...   ....+..++.++.+++.+||..+|.+|++     ..+++.|+||....
T Consensus       190 il~elltG~~pf~~~~~~~~~~~i~~~---~~~~p~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~~~  264 (323)
T cd05615         190 LLYEMLAGQPPFDGEDEDELFQSIMEH---NVSYPKSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRRID  264 (323)
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHhC---CCCCCccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccCCCC
Confidence            468999999999998877777777665   33345678999999999999999999997     57899999999754

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.16  E-value=2e-11  Score=69.53  Aligned_cols=71  Identities=28%  Similarity=0.424  Sum_probs=52.5

Q ss_pred             CEEeeecCCCCCCCCCHH----HHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCC-----CHHHHhcCccccc
Q psy10832          1 MVVEMVDGEPPFFNEPPL----QAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRA-----TAAELLQHPFLRQ   71 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~----~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~-----~~~~l~~~~~~~~   71 (90)
                      ++|+|++|..||......    .....+...   ....+..++..+.+++.+||..||.+|+     +++++++|+||++
T Consensus       186 il~el~~g~~pf~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~  262 (280)
T cd05608         186 TLYEMIAARGPFRARGEKVENKELKQRILND---SVTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRD  262 (280)
T ss_pred             HHHHHHhCCCCCCCCCcchhHHHHHHhhccc---CCCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhhc
Confidence            468999999999864322    222222222   2333456899999999999999999999     7899999999987


Q ss_pred             cCC
Q psy10832         72 AGP   74 (90)
Q Consensus        72 ~~~   74 (90)
                      ..+
T Consensus       263 ~~~  265 (280)
T cd05608         263 LNW  265 (280)
T ss_pred             CCH
Confidence            543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.16  E-value=8.3e-11  Score=67.15  Aligned_cols=76  Identities=29%  Similarity=0.558  Sum_probs=52.8

Q ss_pred             CEEeeecCCCCCCCC-----CHHHHHHHhhcCCCCCCCC--C--CCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccc
Q psy10832          1 MVVEMVDGEPPFFNE-----PPLQAMRRIRDMPPPKLKN--T--HKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQ   71 (90)
Q Consensus         1 il~~~~~g~~p~~~~-----~~~~~~~~i~~~~~~~~~~--~--~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~   71 (90)
                      ++|+|++|..||...     ........+.....+....  .  ..+++.+.+++..||..+|.+||++.+++.|+||..
T Consensus       192 il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~~~  271 (287)
T cd06621         192 TLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIKA  271 (287)
T ss_pred             HHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCccccc
Confidence            368999999999865     2223333333322111111  1  235678999999999999999999999999999976


Q ss_pred             cCCCc
Q psy10832         72 AGPPA   76 (90)
Q Consensus        72 ~~~~~   76 (90)
                      .....
T Consensus       272 ~~~~~  276 (287)
T cd06621         272 QMKKK  276 (287)
T ss_pred             cccch
Confidence            65543

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.15  E-value=9.1e-11  Score=68.17  Aligned_cols=70  Identities=30%  Similarity=0.437  Sum_probs=56.6

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCH----HHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA----AELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~----~~l~~~~~~~~~~   73 (90)
                      ++|+|++|..||...+.......+....   ...+...+..+.+++.+||..+|.+|++.    .+++.|+||....
T Consensus       185 il~el~~G~~pf~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~~~~  258 (325)
T cd05604         185 VLYEMLYGLPPFYCRDVAEMYDNILHKP---LVLRPGASLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFESLS  258 (325)
T ss_pred             eehhhhcCCCCCCCCCHHHHHHHHHcCC---ccCCCCCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCCcCCCC
Confidence            5899999999999888777766666552   22234578999999999999999999874    6899999998643

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.15  E-value=2.6e-10  Score=67.10  Aligned_cols=72  Identities=24%  Similarity=0.450  Sum_probs=54.8

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCC-CCCCCCCCCCHHHHHHHHHhhccCCCCCCC---HHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPP-PKLKNTHKVSPRLQGFLERLLVRDPLQRAT---AAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~---~~~l~~~~~~~~~~   73 (90)
                      ++|+|++|.+||.+.+.......+..... ..++....++.+++++|.+++ .+|.+|++   +.++++||||.+..
T Consensus       225 ilyel~tG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~~~  300 (360)
T cd05627         225 IMYEMLIGYPPFCSETPQETYRKVMNWKETLVFPPEVPISEKAKDLILRFC-TDSENRIGSNGVEEIKSHPFFEGVD  300 (360)
T ss_pred             eeeecccCCCCCCCCCHHHHHHHHHcCCCceecCCCCCCCHHHHHHHHHhc-cChhhcCCCCCHHHHhcCCCCCCCC
Confidence            58999999999999887776666654321 122222347899999999976 59999984   79999999999754

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.15  E-value=3.8e-11  Score=67.84  Aligned_cols=68  Identities=34%  Similarity=0.527  Sum_probs=48.3

Q ss_pred             CEEeeecCCCCCCCCCH-HHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccc
Q psy10832          1 MVVEMVDGEPPFFNEPP-LQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFL   69 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~   69 (90)
                      ++|+|++|..||..... ........... .....+..+++++++++.+||..+|.+||++.+++.||||
T Consensus       200 vl~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~  268 (268)
T cd06624         200 TIVEMATGKPPFIELGEPQAAMFKVGMFK-IHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQDPFL  268 (268)
T ss_pred             HHHHHHhCCCCCccccChhhhHhhhhhhc-cCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhCCCC
Confidence            36789999999976432 22221211111 1122345678999999999999999999999999999997

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.15  E-value=7.3e-11  Score=66.22  Aligned_cols=67  Identities=27%  Similarity=0.439  Sum_probs=54.4

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFL   69 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~   69 (90)
                      ++|+|++|..||...+.......+.....+  ..+..++.++.+++..|+..+|.+||++.+++.|||+
T Consensus       199 il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~~~~  265 (265)
T cd08217         199 LIYELCALSPPFTARNQLQLASKIKEGKFR--RIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQLPLI  265 (265)
T ss_pred             HHHHHHHCCCcccCcCHHHHHHHHhcCCCC--CCccccCHHHHHHHHHHccCCcccCCCHHHHhhCCCC
Confidence            367899999999988766666666555322  2345678999999999999999999999999999985

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.15  E-value=5.9e-11  Score=70.08  Aligned_cols=72  Identities=31%  Similarity=0.558  Sum_probs=53.0

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcC-----------------------C--CCC----CCCCCCCCHHHHHHHHHhhc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDM-----------------------P--PPK----LKNTHKVSPRLQGFLERLLV   51 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~-----------------------~--~~~----~~~~~~~~~~~~~~i~~~l~   51 (90)
                      ++|+|++|..||.+.+.......+...                       .  .+.    .......++++.+++.+||.
T Consensus       194 il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~  273 (372)
T cd07853         194 IFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLV  273 (372)
T ss_pred             HHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCC
Confidence            468999999999987765554443210                       0  000    01123457899999999999


Q ss_pred             cCCCCCCCHHHHhcCcccccc
Q psy10832         52 RDPLQRATAAELLQHPFLRQA   72 (90)
Q Consensus        52 ~~p~~R~~~~~l~~~~~~~~~   72 (90)
                      .||.+|+++.+++.|+||.+.
T Consensus       274 ~dP~~R~t~~e~l~hp~~~~~  294 (372)
T cd07853         274 FDPDKRISAADALAHPYLDEG  294 (372)
T ss_pred             CChhhCcCHHHHhcCHhhCCC
Confidence            999999999999999999874

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.14  E-value=4.8e-11  Score=67.99  Aligned_cols=69  Identities=26%  Similarity=0.459  Sum_probs=49.7

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCC--C-----C------C-----------CCCCCCCCHHHHHHHHHhhccCCCC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMP--P-----P------K-----------LKNTHKVSPRLQGFLERLLVRDPLQ   56 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~--~-----~------~-----------~~~~~~~~~~~~~~i~~~l~~~p~~   56 (90)
                      ++|+|++|.+||.+.........+....  +     +      .           ......++..+.+++.+||..||.+
T Consensus       196 ~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  275 (288)
T cd07863         196 IFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHK  275 (288)
T ss_pred             HHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCccc
Confidence            3688999999998876655444432200  0     0      0           0011245778899999999999999


Q ss_pred             CCCHHHHhcCccc
Q psy10832         57 RATAAELLQHPFL   69 (90)
Q Consensus        57 R~~~~~l~~~~~~   69 (90)
                      |+++.+++.||||
T Consensus       276 R~t~~~~l~hp~f  288 (288)
T cd07863         276 RISAFRALQHPFF  288 (288)
T ss_pred             CCCHHHHhcCCCC
Confidence            9999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.14  E-value=1.4e-10  Score=66.88  Aligned_cols=81  Identities=27%  Similarity=0.557  Sum_probs=59.7

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCCCcccHH
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPPALLVP   80 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~~~~~~~   80 (90)
                      ++|+|++|..||...+.......+.....+... ...++..+.++|.+||..+|.+||++.+++.|+|+...........
T Consensus       203 il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~~~~~~~~~~  281 (308)
T cd06634         203 TCIELAERKPPLFNMNAMSALYHIAQNESPALQ-SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPPTVIMD  281 (308)
T ss_pred             HHHHHHcCCCCCccccHHHHHHHHhhcCCCCcC-cccccHHHHHHHHHHhhCCcccCCCHHHHhhCccccccCChhHHHH
Confidence            367899999999876655555454444322222 2357889999999999999999999999999999998765554444


Q ss_pred             HH
Q psy10832         81 LM   82 (90)
Q Consensus        81 ~~   82 (90)
                      ..
T Consensus       282 ~~  283 (308)
T cd06634         282 LI  283 (308)
T ss_pred             HH
Confidence            33

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.14  E-value=8.1e-11  Score=66.20  Aligned_cols=66  Identities=30%  Similarity=0.471  Sum_probs=52.6

Q ss_pred             EEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccc
Q psy10832          2 VVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFL   69 (90)
Q Consensus         2 l~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~   69 (90)
                      +|+|++|..||...........+..+..+.  .+..++.++.+++.+|+..+|++||++.+++.||||
T Consensus       195 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~  260 (260)
T cd08222         195 LYEMCCLAHAFEGQNFLSVVLRIVEGPTPS--LPETYSRQLNSIMQSMLNKDPSLRPSAAEILRNPFI  260 (260)
T ss_pred             HHHHHhCCCCCCCccHHHHHHHHHcCCCCC--CcchhcHHHHHHHHHHhcCChhhCcCHHHHhhCCCC
Confidence            578899999998776665555555443222  234678899999999999999999999999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.14  E-value=6.8e-11  Score=66.21  Aligned_cols=66  Identities=17%  Similarity=0.245  Sum_probs=53.3

Q ss_pred             EEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccc
Q psy10832          2 VVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFL   69 (90)
Q Consensus         2 l~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~   69 (90)
                      +|+|++|..||.+.+.......+......  ..+..++.++.+++..||..+|.+||++.+++.|||+
T Consensus       191 l~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~p~~  256 (256)
T cd08220         191 LYELASLKRAFEAANLPALVLKIMSGTFA--PISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQPIC  256 (256)
T ss_pred             HHHHHhCCCCcccCchHHHHHHHHhcCCC--CCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhCCCC
Confidence            67899999999987766666555544322  2234578999999999999999999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.13  E-value=4.5e-11  Score=67.15  Aligned_cols=68  Identities=43%  Similarity=0.818  Sum_probs=51.1

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcC--CCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCcc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDM--PPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPF   68 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~   68 (90)
                      ++|+|++|.+||.+.........+...  ..+.......++.++.+++.+||..+|..||++.+++.|+|
T Consensus       193 ~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~  262 (262)
T cd06613         193 TAIELAELQPPMFDLHPMRALFLISKSNFPPPKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQHPF  262 (262)
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHhccCCCccccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcCCC
Confidence            368999999999887655554444333  11222223346788999999999999999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>KOG0603|consensus

Probab=99.13  E-value=2.5e-11  Score=74.52  Aligned_cols=65  Identities=31%  Similarity=0.467  Sum_probs=53.6

Q ss_pred             CEEeeecCCCCCCCCC-HHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCcccc
Q psy10832          1 MVVEMVDGEPPFFNEP-PLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLR   70 (90)
Q Consensus         1 il~~~~~g~~p~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~   70 (90)
                      +||+|++|..||.... ...+...+..+   .+.  ..+|..+++++..||+.||.+|+++.++..|+|+.
T Consensus       502 lLy~ML~G~tp~~~~P~~~ei~~~i~~~---~~s--~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~~  567 (612)
T KOG0603|consen  502 LLYEMLTGRTLFAAHPAGIEIHTRIQMP---KFS--ECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWFL  567 (612)
T ss_pred             HHHHHHhCCCccccCCchHHHHHhhcCC---ccc--cccCHHHHHHHHHhccCChhhCcChhhhccCcchh
Confidence            4799999999999754 43555555444   332  67899999999999999999999999999999993

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.13  E-value=5.9e-11  Score=68.96  Aligned_cols=35  Identities=40%  Similarity=0.725  Sum_probs=32.3

Q ss_pred             CCHHHHHHHHHhhccCCCCCCCHHHHhcCcccccc
Q psy10832         38 VSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQA   72 (90)
Q Consensus        38 ~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~   72 (90)
                      +++.+.+|+..||..||.+||++.+++.||||...
T Consensus       279 ~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~~  313 (327)
T cd08227         279 FSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQI  313 (327)
T ss_pred             cCHHHHHHHHHHHhhCchhcCCHHHHhcChhhhhc
Confidence            46789999999999999999999999999999864

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.13  E-value=5.7e-11  Score=67.54  Aligned_cols=33  Identities=30%  Similarity=0.629  Sum_probs=31.2

Q ss_pred             CCCHHHHHHHHHhhccCCCCCCCHHHHhcCccc
Q psy10832         37 KVSPRLQGFLERLLVRDPLQRATAAELLQHPFL   69 (90)
Q Consensus        37 ~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~   69 (90)
                      .++++++++|.+||..||.+||++.+++.|+||
T Consensus       253 ~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~~  285 (285)
T cd07861         253 NLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF  285 (285)
T ss_pred             CCCHHHHHHHHHHhcCChhhCCCHHHHhcCCCC
Confidence            468899999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.13  E-value=2.7e-11  Score=69.19  Aligned_cols=71  Identities=27%  Similarity=0.451  Sum_probs=53.3

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHH----hhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCC-----CHHHHhcCccccc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRR----IRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRA-----TAAELLQHPFLRQ   71 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~----i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~-----~~~~l~~~~~~~~   71 (90)
                      ++|+|++|..||.+.........    +...   ....+..++..+.+++.+||..||.+|+     ++.+++.|+||..
T Consensus       190 ~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~  266 (285)
T cd05605         190 LIYEMIEGKSPFRQRKEKVKREEVERRVKED---QEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRT  266 (285)
T ss_pred             HHHHHHHCCCCCCCCchhhHHHHHHHHhhhc---ccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCccC
Confidence            36899999999988654333222    2222   2223456799999999999999999999     8999999999986


Q ss_pred             cCC
Q psy10832         72 AGP   74 (90)
Q Consensus        72 ~~~   74 (90)
                      ...
T Consensus       267 ~~~  269 (285)
T cd05605         267 ANF  269 (285)
T ss_pred             CCH
Confidence            543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.13  E-value=7.2e-11  Score=69.40  Aligned_cols=36  Identities=28%  Similarity=0.500  Sum_probs=32.3

Q ss_pred             CCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832         38 VSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus        38 ~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      .+..+++++.+||..||.+|+++.+++.||||....
T Consensus       287 ~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~~  322 (359)
T cd07876         287 KTSQARDLLSKMLVIDPDKRISVDEALRHPYITVWY  322 (359)
T ss_pred             cchhHHHHHHHHhccCcccCCCHHHHhcCchhhhhc
Confidence            357889999999999999999999999999998543

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.13  E-value=1.5e-10  Score=68.05  Aligned_cols=72  Identities=25%  Similarity=0.527  Sum_probs=55.9

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCC-CCCCCCCCCCHHHHHHHHHhhccCCCCCCC---HHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPP-PKLKNTHKVSPRLQGFLERLLVRDPLQRAT---AAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~---~~~l~~~~~~~~~~   73 (90)
                      ++|+|++|.+||.+.+.......+..... ...+....++++++++|.+|+. +|.+|++   +.+++.|+||.+..
T Consensus       228 il~el~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~~~~~~~  303 (364)
T cd05599         228 IMYEMLVGYPPFCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPFFKGVD  303 (364)
T ss_pred             HHHHhhcCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCCCcCCCC
Confidence            47899999999999887776666655332 1222223578999999999996 8999998   99999999998754

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.12  E-value=6.8e-11  Score=67.21  Aligned_cols=69  Identities=26%  Similarity=0.488  Sum_probs=48.9

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCC---------------------CCCCC-------CCCCCCHHHHHHHHHhhcc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMP---------------------PPKLK-------NTHKVSPRLQGFLERLLVR   52 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~---------------------~~~~~-------~~~~~~~~~~~~i~~~l~~   52 (90)
                      ++|+|++|.+||.+.........+....                     .+...       ....++..+.+++.+||..
T Consensus       190 i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  269 (286)
T cd07847         190 VFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQM  269 (286)
T ss_pred             HHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcC
Confidence            3678999999998876544433322100                     00000       0124578899999999999


Q ss_pred             CCCCCCCHHHHhcCccc
Q psy10832         53 DPLQRATAAELLQHPFL   69 (90)
Q Consensus        53 ~p~~R~~~~~l~~~~~~   69 (90)
                      +|.+||++.+++.|+||
T Consensus       270 ~p~~Rp~~~eil~~~~f  286 (286)
T cd07847         270 DPTERLSCEELLEHPYF  286 (286)
T ss_pred             CccccCCHHHHhcCCCC
Confidence            99999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.12  E-value=7.4e-11  Score=66.62  Aligned_cols=68  Identities=29%  Similarity=0.519  Sum_probs=49.6

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCcccc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLR   70 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~   70 (90)
                      ++|+|++|..||...........+.... .....+..+++.+++++. |+..+|.+||++.+++.||||.
T Consensus       198 i~~el~~g~~pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~-~~~~~p~~Rp~~~eil~hp~~~  265 (266)
T cd06651         198 TVVEMLTEKPPWAEYEAMAAIFKIATQP-TNPQLPSHISEHARDFLG-CIFVEARHRPSAEELLRHPFAQ  265 (266)
T ss_pred             HHHHHHHCCCCccccchHHHHHHHhcCC-CCCCCchhcCHHHHHHHH-HhcCChhhCcCHHHHhcCcccc
Confidence            3688999999998765544444433221 123334567889999995 5567999999999999999986

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.12  E-value=7.6e-11  Score=68.66  Aligned_cols=69  Identities=23%  Similarity=0.431  Sum_probs=50.7

Q ss_pred             CEEeeecCCCCCCCC--------CHHH-HHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCC------HHHHhc
Q psy10832          1 MVVEMVDGEPPFFNE--------PPLQ-AMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRAT------AAELLQ   65 (90)
Q Consensus         1 il~~~~~g~~p~~~~--------~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~------~~~l~~   65 (90)
                      ++|+|++|..||...        .... ....+...   ....+..++.++.+++.+||..||.+|++      +.++++
T Consensus       185 ~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~---~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~  261 (329)
T cd05588         185 LMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEK---QIRIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKS  261 (329)
T ss_pred             HHHHHHHCCCCcccccccccccccchHHHHHHHHcC---CCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhc
Confidence            368999999999631        1112 22333333   23345678999999999999999999987      789999


Q ss_pred             Ccccccc
Q psy10832         66 HPFLRQA   72 (90)
Q Consensus        66 ~~~~~~~   72 (90)
                      ||||...
T Consensus       262 hp~~~~~  268 (329)
T cd05588         262 HPFFRNI  268 (329)
T ss_pred             CCCCCCC
Confidence            9999764

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.12  E-value=1.3e-10  Score=64.87  Aligned_cols=66  Identities=29%  Similarity=0.446  Sum_probs=53.5

Q ss_pred             EEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccc
Q psy10832          2 VVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFL   69 (90)
Q Consensus         2 l~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~   69 (90)
                      +|+|++|..||...........+.......  .+..++..+.+++..||..+|++||++.+++.||||
T Consensus       193 ~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~  258 (258)
T cd08215         193 LYELCTLKHPFEGENLLELALKILKGQYPP--IPSQYSSELRNLVSSLLQKDPEERPSIAQILQSPFI  258 (258)
T ss_pred             HHHHHcCCCCCCCCcHHHHHHHHhcCCCCC--CCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCCCC
Confidence            578899999998877766666655543222  234678999999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.12  E-value=5e-11  Score=67.54  Aligned_cols=70  Identities=24%  Similarity=0.423  Sum_probs=49.3

Q ss_pred             CEEeeecCCCCCCCCCHHHH-HHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCC-HHHHhcCcccc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQA-MRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRAT-AAELLQHPFLR   70 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~-~~~l~~~~~~~   70 (90)
                      ++|+|++|..||........ ...+..........+...++.+.+++..||..+|.+|++ ++++++|+||.
T Consensus       195 il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h~~~~  266 (267)
T PHA03390        195 LTYELLTGKHPFKEDEDEELDLESLLKRQQKKLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKHPFLK  266 (267)
T ss_pred             HHHHHHHCCCCCCCCCcchhhHHHHHHhhcccCCcccccCHHHHHHHHHHhccChhhCCchHHHHhcCCccc
Confidence            36899999999986533221 111111111122334468999999999999999999996 69999999996

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.12  E-value=4.7e-11  Score=68.23  Aligned_cols=70  Identities=27%  Similarity=0.506  Sum_probs=49.5

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcC--CCCC-----------------C------CCCCCCCHHHHHHHHHhhccCCC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDM--PPPK-----------------L------KNTHKVSPRLQGFLERLLVRDPL   55 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~--~~~~-----------------~------~~~~~~~~~~~~~i~~~l~~~p~   55 (90)
                      ++|+|++|..||.+.+.......+...  .+..                 .      .....++.++.+||.+||..||.
T Consensus       201 ~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~  280 (295)
T cd07837         201 IFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPA  280 (295)
T ss_pred             HHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChh
Confidence            368899999999886654433332210  0000                 0      00124688899999999999999


Q ss_pred             CCCCHHHHhcCcccc
Q psy10832         56 QRATAAELLQHPFLR   70 (90)
Q Consensus        56 ~R~~~~~l~~~~~~~   70 (90)
                      +|+++.+++.|+||.
T Consensus       281 ~R~~~~eil~~~~~~  295 (295)
T cd07837         281 KRISAKAALTHPYFD  295 (295)
T ss_pred             hcCCHHHHhcCCCcC
Confidence            999999999999984

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.11  E-value=3e-11  Score=68.84  Aligned_cols=72  Identities=26%  Similarity=0.425  Sum_probs=51.6

Q ss_pred             CEEeeecCCCCCCCCCHH--HHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCC-----CHHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPL--QAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRA-----TAAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~-----~~~~l~~~~~~~~~~   73 (90)
                      ++|+|++|..||......  .........  .....+..++.++.+++..||..||.+|+     ++.++++|+||.+..
T Consensus       185 ~l~~l~~g~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~~~  262 (279)
T cd05633         185 MLFKLLRGHSPFRQHKTKDKHEIDRMTLT--VNVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKGID  262 (279)
T ss_pred             HHHHHHhCCCCcCCCCCcCHHHHHHHhhc--CCcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccCCC
Confidence            368899999999754221  112221111  12233456799999999999999999999     599999999999855


Q ss_pred             C
Q psy10832         74 P   74 (90)
Q Consensus        74 ~   74 (90)
                      .
T Consensus       263 ~  263 (279)
T cd05633         263 W  263 (279)
T ss_pred             H
Confidence            3

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.11  E-value=1.5e-10  Score=67.67  Aligned_cols=74  Identities=31%  Similarity=0.503  Sum_probs=52.0

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCC------------------------CCCC---CCCCCCCHHHHHHHHHhhccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMP------------------------PPKL---KNTHKVSPRLQGFLERLLVRD   53 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~------------------------~~~~---~~~~~~~~~~~~~i~~~l~~~   53 (90)
                      ++|+|++|..||.+.+.......+....                        .+..   .....++.++.+++.+||..|
T Consensus       208 il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  287 (342)
T cd07854         208 IFAEMLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFN  287 (342)
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCC
Confidence            3688999999998765544333222110                        0000   011346788999999999999


Q ss_pred             CCCCCCHHHHhcCccccccCC
Q psy10832         54 PLQRATAAELLQHPFLRQAGP   74 (90)
Q Consensus        54 p~~R~~~~~l~~~~~~~~~~~   74 (90)
                      |.+|+++.+++.|+||.....
T Consensus       288 P~~R~t~~ell~h~~~~~~~~  308 (342)
T cd07854         288 PMDRLTAEEALMHPYMSCYSC  308 (342)
T ss_pred             chhccCHHHHhCCCccccccC
Confidence            999999999999999986543

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.11  E-value=1.1e-10  Score=65.12  Aligned_cols=68  Identities=40%  Similarity=0.642  Sum_probs=51.2

Q ss_pred             CEEeeecCCCCCCCCC-HHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccc
Q psy10832          1 MVVEMVDGEPPFFNEP-PLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFL   69 (90)
Q Consensus         1 il~~~~~g~~p~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~   69 (90)
                      ++|+|++|..||.... .......+..... ....+...+....+++.+|+..+|.+||++.+++.||||
T Consensus       192 il~~l~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~~~~  260 (260)
T cd06606         192 TVIEMATGKPPWSELGNPMAALYKIGSSGE-PPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQHPFL  260 (260)
T ss_pred             HHHHHHhCCCCCCCCCchHHHHHhccccCC-CcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhCCCC
Confidence            3678999999998765 3334444332111 223345668999999999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.10  E-value=1.7e-10  Score=64.63  Aligned_cols=68  Identities=35%  Similarity=0.525  Sum_probs=52.0

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFL   69 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~   69 (90)
                      ++|+|++|..||...........+..... ....+..+++++.+++.+||..+|.+|+++.+++.|||+
T Consensus       191 ~l~~l~~g~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~  258 (258)
T cd06632         191 TVLEMATGKPPWSQLEGVAAVFKIGRSKE-LPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEHPFV  258 (258)
T ss_pred             HHHHHHhCCCCcccCcHHHHHHHHHhccc-CCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcCCCC
Confidence            36789999999987765544444433111 222345678999999999999999999999999999996

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.10  E-value=1e-10  Score=68.12  Aligned_cols=70  Identities=24%  Similarity=0.422  Sum_probs=51.1

Q ss_pred             CEEeeecCCCCCCCC--------C-HHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCC------HHHHhc
Q psy10832          1 MVVEMVDGEPPFFNE--------P-PLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRAT------AAELLQ   65 (90)
Q Consensus         1 il~~~~~g~~p~~~~--------~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~------~~~l~~   65 (90)
                      ++|+|++|..||...        . .......+...   ....+..++..+.+++.+||..||.+|++      +.+++.
T Consensus       185 il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~---~~~~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~  261 (329)
T cd05618         185 LMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK---QIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQG  261 (329)
T ss_pred             HHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcC---CCCCCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhc
Confidence            468999999999521        1 11222333333   23345678999999999999999999998      579999


Q ss_pred             CccccccC
Q psy10832         66 HPFLRQAG   73 (90)
Q Consensus        66 ~~~~~~~~   73 (90)
                      ||||....
T Consensus       262 hp~f~~~~  269 (329)
T cd05618         262 HPFFRNVD  269 (329)
T ss_pred             CCCCCCCC
Confidence            99998643

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.10  E-value=7.7e-11  Score=66.95  Aligned_cols=74  Identities=30%  Similarity=0.577  Sum_probs=53.4

Q ss_pred             CEEeeecCCCCCCCC-CHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCCC
Q psy10832          1 MVVEMVDGEPPFFNE-PPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPP   75 (90)
Q Consensus         1 il~~~~~g~~p~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~~   75 (90)
                      ++|+|++|..||... ........+.....+... ...++.++.+++.+||..+|.+||++.+++.|+||......
T Consensus       196 ~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~~  270 (283)
T cd06617         196 TMIELATGRFPYDSWKTPFQQLKQVVEEPSPQLP-AEKFSPEFQDFVNKCLKKNYKERPNYPELLQHPFFELHLSK  270 (283)
T ss_pred             HHHHHHhCCCCCCccccCHHHHHHHHhcCCCCCC-ccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhhhcccc
Confidence            368899999999753 222333333333222222 23578999999999999999999999999999999986644

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.10  E-value=5.2e-10  Score=66.18  Aligned_cols=71  Identities=24%  Similarity=0.464  Sum_probs=54.5

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCC-CCCCCCCCCCHHHHHHHHHhhccCCCCCC---CHHHHhcCcccccc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPP-PKLKNTHKVSPRLQGFLERLLVRDPLQRA---TAAELLQHPFLRQA   72 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~p~~R~---~~~~l~~~~~~~~~   72 (90)
                      ++|+|++|..||.+.+.......+..... ...+....++.++.++|.+|+ .+|.+|+   ++.++++|+||...
T Consensus       233 ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h~~~~~~  307 (376)
T cd05598         233 ILYEMLVGQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAHPFFKGI  307 (376)
T ss_pred             eeeehhhCCCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCCCCcCCC
Confidence            58999999999998877665555544321 122223467899999999976 6999999   89999999999864

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.10  E-value=7.8e-11  Score=67.75  Aligned_cols=36  Identities=19%  Similarity=0.266  Sum_probs=32.5

Q ss_pred             CCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832         38 VSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus        38 ~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      .+.++.+++.+||..||.+|+++.++++||||....
T Consensus       260 ~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~~~  295 (303)
T cd07869         260 YVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSDLP  295 (303)
T ss_pred             CChHHHHHHHHHhccCchhccCHHHHhcCcccccCC
Confidence            356789999999999999999999999999998653

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.10  E-value=5.1e-11  Score=67.68  Aligned_cols=75  Identities=24%  Similarity=0.410  Sum_probs=52.5

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCC-CCCCCCCCCCCHHHHHHHHHhhccCCCCCC-----CHHHHhcCccccccCC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMP-PPKLKNTHKVSPRLQGFLERLLVRDPLQRA-----TAAELLQHPFLRQAGP   74 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~-----~~~~l~~~~~~~~~~~   74 (90)
                      ++|+|++|..||...........+.... ......+..+++++.+++.+||..+|.+|+     ++.+++.|+||....+
T Consensus       183 il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~~~~  262 (277)
T cd05577         183 TLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKDLNW  262 (277)
T ss_pred             HHHHHhhCCCCCCCCcccccHHHHHhccccccccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhChhhhcCCh
Confidence            3678999999998754321111111110 012233456799999999999999999999     8888999999987654


Q ss_pred             C
Q psy10832         75 P   75 (90)
Q Consensus        75 ~   75 (90)
                      .
T Consensus       263 ~  263 (277)
T cd05577         263 R  263 (277)
T ss_pred             h
Confidence            3

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>KOG0593|consensus

Probab=99.10  E-value=2.7e-11  Score=69.66  Aligned_cols=72  Identities=28%  Similarity=0.476  Sum_probs=55.0

Q ss_pred             EEeeecCCCCCCCCCHHHHHHHhhcC--------------CC-------CCCC-------CCCCCCHHHHHHHHHhhccC
Q psy10832          2 VVEMVDGEPPFFNEPPLQAMRRIRDM--------------PP-------PKLK-------NTHKVSPRLQGFLERLLVRD   53 (90)
Q Consensus         2 l~~~~~g~~p~~~~~~~~~~~~i~~~--------------~~-------~~~~-------~~~~~~~~~~~~i~~~l~~~   53 (90)
                      +.||++|.+-|++.+..+++..|...              ++       |.+.       ....++.-+.+|++.||.+|
T Consensus       192 ~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~d  271 (396)
T KOG0593|consen  192 FAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMD  271 (396)
T ss_pred             HHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCC
Confidence            45899999999999988888777510              00       0010       11345667899999999999


Q ss_pred             CCCCCCHHHHhcCccccccC
Q psy10832         54 PLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus        54 p~~R~~~~~l~~~~~~~~~~   73 (90)
                      |.+|+++++++.|+||++..
T Consensus       272 P~~R~sc~qll~H~yFd~~~  291 (396)
T KOG0593|consen  272 PDDRLSCEQLLHHPYFDGFI  291 (396)
T ss_pred             ccccccHHHHhcChHHHHHH
Confidence            99999999999999997654

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.10  E-value=9.2e-11  Score=65.90  Aligned_cols=66  Identities=21%  Similarity=0.332  Sum_probs=50.7

Q ss_pred             CEEeeecCCCCCCCCCH---HHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCH--HHHhcCccc
Q psy10832          1 MVVEMVDGEPPFFNEPP---LQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA--AELLQHPFL   69 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~--~~l~~~~~~   69 (90)
                      ++|+|++|..||...+.   ..........   ....+..++..+.+++.+||..+|.+|++.  .++++|+||
T Consensus       188 ~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~~~~  258 (258)
T cd05578         188 TAYECLRGKRPYRGHSRTIRDQIRAKQETA---DVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKNHPYF  258 (258)
T ss_pred             HHHHHHhCCCCCCCCCccHHHHHHHHhccc---cccCcccCcHHHHHHHHHHccCChhHcCCccHHHHhcCCCC
Confidence            36789999999998663   3333332222   233445678999999999999999999999  999999997

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.10  E-value=1.9e-10  Score=66.71  Aligned_cols=70  Identities=24%  Similarity=0.310  Sum_probs=56.7

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCC----HHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRAT----AAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~----~~~l~~~~~~~~~~   73 (90)
                      ++|+|++|..||.+.+.......+...   ....+...+..+.+++.+||..+|.+|++    +.++++|+||....
T Consensus       185 il~el~~g~~pf~~~~~~~~~~~i~~~---~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~~~~~~  258 (321)
T cd05603         185 VLYEMLYGLPPFYSRDVSQMYDNILHK---PLQLPGGKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNHVFFSPIN  258 (321)
T ss_pred             hhhhhhcCCCCCCCCCHHHHHHHHhcC---CCCCCCCCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCCCcCCCC
Confidence            479999999999998877776666655   23334567899999999999999999986    45899999998644

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.09  E-value=1.5e-10  Score=64.98  Aligned_cols=70  Identities=39%  Similarity=0.681  Sum_probs=53.8

Q ss_pred             CEEeeecCCCCCCCC---CHHHHHHHhhcCCCCCCCCCCC-CCHHHHHHHHHhhccCCCCCCCHHHHhcCcccccc
Q psy10832          1 MVVEMVDGEPPFFNE---PPLQAMRRIRDMPPPKLKNTHK-VSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQA   72 (90)
Q Consensus         1 il~~~~~g~~p~~~~---~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~   72 (90)
                      ++|+|++|..||...   ........+.....+.  .+.. ++..+.+++..||..+|..|+++.+++.|+|+...
T Consensus       189 il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~~~~~~~  262 (264)
T cd06623         189 TLLECALGKFPFLPPGQPSFFELMQAICDGPPPS--LPAEEFSPEFRDFISACLQKDPKKRPSAAELLQHPFIKKA  262 (264)
T ss_pred             HHHHHHhCCCCCccccccCHHHHHHHHhcCCCCC--CCcccCCHHHHHHHHHHccCChhhCCCHHHHHhCHHHHhc
Confidence            368899999999876   4444455555433222  2334 78999999999999999999999999999999754

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.09  E-value=9.9e-11  Score=67.96  Aligned_cols=75  Identities=32%  Similarity=0.473  Sum_probs=53.5

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCC-CCC---------------------------CCCCCCCHHHHHHHHHhhcc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPP-PKL---------------------------KNTHKVSPRLQGFLERLLVR   52 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~-~~~---------------------------~~~~~~~~~~~~~i~~~l~~   52 (90)
                      ++|+|++|.+||.+.+.......+..... +..                           .....++.++.+++.+||..
T Consensus       196 il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  275 (330)
T cd07834         196 IFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVF  275 (330)
T ss_pred             HHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccC
Confidence            36789999999988766554444332100 000                           00123578899999999999


Q ss_pred             CCCCCCCHHHHhcCccccccCCC
Q psy10832         53 DPLQRATAAELLQHPFLRQAGPP   75 (90)
Q Consensus        53 ~p~~R~~~~~l~~~~~~~~~~~~   75 (90)
                      +|.+||++.+++.|+||......
T Consensus       276 ~P~~Rpt~~~ll~~~~~~~~~~~  298 (330)
T cd07834         276 DPKKRITADEALAHPYLAQLHDP  298 (330)
T ss_pred             ChhhCCCHHHHHhCccHHhhccc
Confidence            99999999999999999875543

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.09  E-value=1.3e-10  Score=68.14  Aligned_cols=36  Identities=31%  Similarity=0.538  Sum_probs=32.3

Q ss_pred             CCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832         38 VSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus        38 ~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      .+.++++++.+||..||.+|+++.+++.||||....
T Consensus       283 ~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~~~~  318 (355)
T cd07874         283 KASQARDLLSKMLVIDPAKRISVDEALQHPYINVWY  318 (355)
T ss_pred             cchHHHHHHHHHhcCCchhcCCHHHHhcCcchhccc
Confidence            356789999999999999999999999999998654

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.09  E-value=1.4e-10  Score=71.06  Aligned_cols=69  Identities=23%  Similarity=0.355  Sum_probs=57.5

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQ   71 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~   71 (90)
                      ++|+|++|..||.+.+.......+..+...  ..+..+++++.+++..||..+|.+||++.+++.|+|+..
T Consensus       234 ilyeLltG~~Pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~p~~~~  302 (496)
T PTZ00283        234 LLYELLTLKRPFDGENMEEVMHKTLAGRYD--PLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNMPICKL  302 (496)
T ss_pred             HHHHHHHCCCCCCCCCHHHHHHHHhcCCCC--CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhCHHHHH
Confidence            468999999999998887777766655332  234567999999999999999999999999999999775

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.09  E-value=1.1e-10  Score=68.33  Aligned_cols=75  Identities=29%  Similarity=0.434  Sum_probs=53.2

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCC----------------------CCCC------CCCCCCHHHHHHHHHhhcc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPP----------------------PKLK------NTHKVSPRLQGFLERLLVR   52 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~----------------------~~~~------~~~~~~~~~~~~i~~~l~~   52 (90)
                      ++|+|++|..||.+.+.......+.....                      +...      .....+..+.+++.+||..
T Consensus       204 il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  283 (342)
T cd07879         204 IMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLEL  283 (342)
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCC
Confidence            36899999999998765444333322100                      0000      0124577899999999999


Q ss_pred             CCCCCCCHHHHhcCccccccCCC
Q psy10832         53 DPLQRATAAELLQHPFLRQAGPP   75 (90)
Q Consensus        53 ~p~~R~~~~~l~~~~~~~~~~~~   75 (90)
                      ||.+|+++.+++.|+||......
T Consensus       284 dP~~R~~~~e~l~h~~f~~~~~~  306 (342)
T cd07879         284 DVDKRLTATEALEHPYFDSFRDA  306 (342)
T ss_pred             ChhhCcCHHHHhcCcchhhcccc
Confidence            99999999999999999986543

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.08  E-value=1.2e-10  Score=66.23  Aligned_cols=69  Identities=28%  Similarity=0.431  Sum_probs=48.9

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcC-------------------------CC-CCCCCCCCCCHHHHHHHHHhhccCC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDM-------------------------PP-PKLKNTHKVSPRLQGFLERLLVRDP   54 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~-------------------------~~-~~~~~~~~~~~~~~~~i~~~l~~~p   54 (90)
                      ++|+|++|.+||.+.........+...                         .. ........++..+.+++.+|+..+|
T Consensus       189 ~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P  268 (283)
T cd07835         189 IFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDP  268 (283)
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCCh
Confidence            368899999999876554333222110                         00 0001123567899999999999999


Q ss_pred             CCCCCHHHHhcCccc
Q psy10832         55 LQRATAAELLQHPFL   69 (90)
Q Consensus        55 ~~R~~~~~l~~~~~~   69 (90)
                      .+||++.+++.|+||
T Consensus       269 ~~Rpt~~~il~~~~~  283 (283)
T cd07835         269 AKRISAKAALQHPYF  283 (283)
T ss_pred             hhCcCHHHHhcCCCC
Confidence            999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.08  E-value=4.9e-10  Score=66.33  Aligned_cols=72  Identities=25%  Similarity=0.446  Sum_probs=53.7

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCC-CCCCCCCCCCHHHHHHHHHhhccCCCCC---CCHHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPP-PKLKNTHKVSPRLQGFLERLLVRDPLQR---ATAAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~p~~R---~~~~~l~~~~~~~~~~   73 (90)
                      ++|+|++|.+||.+.+.......+..... ..++....++.++.++|.+||. +|.+|   +++.+++.|+||.+..
T Consensus       237 il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~hp~~~~~~  312 (377)
T cd05629         237 IMFECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSHPFFRGVD  312 (377)
T ss_pred             hhhhhhcCCCCCCCCCHHHHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcCCCcCCCC
Confidence            57999999999998877666666654321 1222223578999999999997 66665   5899999999998643

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>KOG0596|consensus

Probab=99.08  E-value=1.1e-10  Score=71.40  Aligned_cols=72  Identities=29%  Similarity=0.434  Sum_probs=52.9

Q ss_pred             CEEeeecCCCCCCCC-CHHHHHHHhhcCCCCCCCCCCCCC-HHHHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNE-PPLQAMRRIRDMPPPKLKNTHKVS-PRLQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~-~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      |||+|+.|++||..- +...-+..|...+. .+.++..-. .++.+++++||..||.+|+++.++++|||++...
T Consensus       561 ILYqMvYgktPf~~~~n~~aKl~aI~~P~~-~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqhpFl~~~~  634 (677)
T KOG0596|consen  561 ILYQMVYGKTPFGQIINQIAKLHAITDPNH-EIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQHPFLQIQP  634 (677)
T ss_pred             HHHHHHhcCCchHHHHHHHHHHHhhcCCCc-cccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcCccccccc
Confidence            589999999999874 34444555544422 223332222 3499999999999999999999999999999743

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.07  E-value=1.1e-10  Score=66.22  Aligned_cols=82  Identities=30%  Similarity=0.498  Sum_probs=58.0

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCCCc-ccH
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPPA-LLV   79 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~~~-~~~   79 (90)
                      ++|+|++|..||...........+.....+.  .....+.++.+++.+|+..+|.+||++.+++.|+|+......- .+.
T Consensus       190 il~el~tg~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~~~~~~~  267 (277)
T cd06642         190 TAIELAKGEPPNSDLHPMRVLFLIPKNSPPT--LEGQYSKPFKEFVEACLNKDPRFRPTAKELLKHKFITRYTKKTSFLT  267 (277)
T ss_pred             HHHHHHhCCCCCcccchhhHHhhhhcCCCCC--CCcccCHHHHHHHHHHccCCcccCcCHHHHHHhHHHHHHhhhHHHHH
Confidence            3678999999998765554444443332222  2335678899999999999999999999999999998765433 333


Q ss_pred             HHHhh
Q psy10832         80 PLMKG   84 (90)
Q Consensus        80 ~~~~~   84 (90)
                      ..++.
T Consensus       268 ~~~~~  272 (277)
T cd06642         268 ELIDR  272 (277)
T ss_pred             HHHHH
Confidence            34333

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.07  E-value=1.7e-10  Score=67.10  Aligned_cols=70  Identities=26%  Similarity=0.428  Sum_probs=56.4

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCH----HHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA----AELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~----~~l~~~~~~~~~~   73 (90)
                      ++|+|++|.+||.+.+.......+...   ....+..++..+.+++.+||..+|.+|++.    .++++|+||....
T Consensus       185 il~el~~g~~pf~~~~~~~~~~~i~~~---~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~~~~~~  258 (325)
T cd05602         185 VLYEMLYGLPPFYSRNTAEMYDNILNK---PLQLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFFSPIN  258 (325)
T ss_pred             HHHHHhcCCCCCCCCCHHHHHHHHHhC---CcCCCCCCCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCcccCCCC
Confidence            478999999999988877776666554   223345679999999999999999999975    4899999997643

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.06  E-value=2.2e-10  Score=66.76  Aligned_cols=74  Identities=26%  Similarity=0.437  Sum_probs=53.0

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcC--CCCCC-----------------------CCCCCCCHHHHHHHHHhhccCCC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDM--PPPKL-----------------------KNTHKVSPRLQGFLERLLVRDPL   55 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~--~~~~~-----------------------~~~~~~~~~~~~~i~~~l~~~p~   55 (90)
                      ++|+|++|.+||.+.+.......+...  .+...                       ......+.++.+++.+||..+|+
T Consensus       223 ~l~el~tg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~  302 (335)
T PTZ00024        223 IFAELLTGKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPL  302 (335)
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCch
Confidence            368899999999987765544443220  00000                       00123478899999999999999


Q ss_pred             CCCCHHHHhcCccccccCC
Q psy10832         56 QRATAAELLQHPFLRQAGP   74 (90)
Q Consensus        56 ~R~~~~~l~~~~~~~~~~~   74 (90)
                      +|+++++++.|+||.....
T Consensus       303 ~R~s~~~~l~~~~~~~~~~  321 (335)
T PTZ00024        303 ERISAKEALKHEYFKSDPL  321 (335)
T ss_pred             hccCHHHHhcCcccCCCCC
Confidence            9999999999999997543

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.06  E-value=4.4e-10  Score=65.13  Aligned_cols=76  Identities=28%  Similarity=0.546  Sum_probs=57.8

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCCCcc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPPAL   77 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~~~~   77 (90)
                      ++|+|++|..||...........+.....+... ...++..+.+++.+||..+|.+|+++.+++.|+|+........
T Consensus       213 il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~~~~  288 (317)
T cd06635         213 TCIELAERKPPLFNMNAMSALYHIAQNESPTLQ-SNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRERPETV  288 (317)
T ss_pred             HHHHHHhCCCCCCCccHHHHHHHHHhccCCCCC-CccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhccCcccc
Confidence            367899999999887766666665554332222 3456889999999999999999999999999999876554433

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.06  E-value=2.7e-10  Score=63.62  Aligned_cols=66  Identities=35%  Similarity=0.686  Sum_probs=51.5

Q ss_pred             EEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccc
Q psy10832          2 VVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFL   69 (90)
Q Consensus         2 l~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~   69 (90)
                      +|+|++|..||...........+....  ....+..++..+.+++.+||..+|++|+++.+++.|+||
T Consensus       189 l~~l~~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~~  254 (254)
T cd06627         189 VIELLTGNPPYYDLNPMAALFRIVQDD--HPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLKHPWI  254 (254)
T ss_pred             HHHHHhCCCCCCCccHHHHHHHHhccC--CCCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhcCCCC
Confidence            578999999998766544444443332  223345678999999999999999999999999999997

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.06  E-value=2.2e-10  Score=65.28  Aligned_cols=71  Identities=31%  Similarity=0.468  Sum_probs=52.7

Q ss_pred             CEEeeecCCCCCCCCC---HHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCC-----CHHHHhcCcccccc
Q psy10832          1 MVVEMVDGEPPFFNEP---PLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRA-----TAAELLQHPFLRQA   72 (90)
Q Consensus         1 il~~~~~g~~p~~~~~---~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~-----~~~~l~~~~~~~~~   72 (90)
                      ++|+|++|..||....   .......+...   ....+..++.++.+++.+||..+|.+|+     ++.++++|+||...
T Consensus       185 ~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~~  261 (278)
T cd05606         185 MLFKLLRGHSPFRQHKTKDKHEIDRMTLTM---AVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRSL  261 (278)
T ss_pred             HHHHHHhCCCCCCCCCccchHHHHHHhhcc---CCCCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCccccCC
Confidence            3689999999998762   22222222222   2333456789999999999999999999     89999999999876


Q ss_pred             CC
Q psy10832         73 GP   74 (90)
Q Consensus        73 ~~   74 (90)
                      .+
T Consensus       262 ~~  263 (278)
T cd05606         262 DW  263 (278)
T ss_pred             Cc
Confidence            53

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.06  E-value=1.4e-10  Score=66.30  Aligned_cols=73  Identities=27%  Similarity=0.510  Sum_probs=52.3

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcC--CC------------------CCCC------CCCCCCHHHHHHHHHhhccCC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDM--PP------------------PKLK------NTHKVSPRLQGFLERLLVRDP   54 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~--~~------------------~~~~------~~~~~~~~~~~~i~~~l~~~p   54 (90)
                      ++|+|++|.+||.+.........+...  .+                  +...      ....+++++.+++.+||..+|
T Consensus       193 i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P  272 (294)
T PLN00009        193 IFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDP  272 (294)
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCCh
Confidence            367899999999877655444333210  00                  0000      013467889999999999999


Q ss_pred             CCCCCHHHHhcCccccccC
Q psy10832         55 LQRATAAELLQHPFLRQAG   73 (90)
Q Consensus        55 ~~R~~~~~l~~~~~~~~~~   73 (90)
                      ++|++..+++.|+||.+.+
T Consensus       273 ~~Rps~~~~l~~~~~~~~~  291 (294)
T PLN00009        273 SKRITARAALEHEYFKDLG  291 (294)
T ss_pred             hhCcCHHHHhcCchHhHHh
Confidence            9999999999999998765

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.06  E-value=1.5e-10  Score=67.52  Aligned_cols=39  Identities=38%  Similarity=0.635  Sum_probs=34.9

Q ss_pred             CCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCCC
Q psy10832         37 KVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPP   75 (90)
Q Consensus        37 ~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~~   75 (90)
                      .++.++.+++.+||..+|.+|+++.++++|+||......
T Consensus       262 ~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~~~  300 (337)
T cd07858         262 HANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLHDP  300 (337)
T ss_pred             cCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhcCc
Confidence            568889999999999999999999999999999875433

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.06  E-value=1.7e-10  Score=67.37  Aligned_cols=74  Identities=27%  Similarity=0.499  Sum_probs=51.8

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCC--C--------------------CCCC------CCCCCCHHHHHHHHHhhcc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMP--P--------------------PKLK------NTHKVSPRLQGFLERLLVR   52 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~--~--------------------~~~~------~~~~~~~~~~~~i~~~l~~   52 (90)
                      ++|+|++|..||.+.+.......+....  .                    +...      .....++.+.+++.+||..
T Consensus       205 il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~  284 (343)
T cd07878         205 IMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVL  284 (343)
T ss_pred             HHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCC
Confidence            4689999999998876554443332110  0                    0000      0123466789999999999


Q ss_pred             CCCCCCCHHHHhcCccccccCC
Q psy10832         53 DPLQRATAAELLQHPFLRQAGP   74 (90)
Q Consensus        53 ~p~~R~~~~~l~~~~~~~~~~~   74 (90)
                      ||.+|+++.+++.||||.....
T Consensus       285 dp~~R~s~~ell~hp~~~~~~~  306 (343)
T cd07878         285 DSDKRISASEALAHPYFSQYHD  306 (343)
T ss_pred             ChhhCCCHHHHhcCcchhccCC
Confidence            9999999999999999987553

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.06  E-value=2.7e-10  Score=67.49  Aligned_cols=72  Identities=28%  Similarity=0.574  Sum_probs=54.5

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCC-CCCCCCCCCCHHHHHHHHHhhccCCCCCCC---HHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPP-PKLKNTHKVSPRLQGFLERLLVRDPLQRAT---AAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~---~~~l~~~~~~~~~~   73 (90)
                      ++|+|++|.+||.+.+.......+..... ...+....+++++.++|.+++ .+|.+|++   +.+++.|+||....
T Consensus       237 il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~~~  312 (382)
T cd05625         237 ILYEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAHPFFKTID  312 (382)
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcCCCcCCcC
Confidence            47899999999998877665555544322 222333467999999999976 59999987   99999999998754

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.06  E-value=3.6e-10  Score=63.40  Aligned_cols=67  Identities=27%  Similarity=0.389  Sum_probs=54.6

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFL   69 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~   69 (90)
                      ++|+|++|..||...+.......+..+.....  +..++.++.+++..|+..+|.+|+++.+++.|+|+
T Consensus       190 i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~~l  256 (256)
T cd08221         190 VLYELLTLKRTFDATNPLNLVVKIVQGNYTPV--VSVYSSELISLVHSLLQQDPEKRPTADEVLDQPLL  256 (256)
T ss_pred             HHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCC--ccccCHHHHHHHHHHcccCcccCCCHHHHhhCcCC
Confidence            36789999999998877777767665543222  24578999999999999999999999999999985

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.05  E-value=7.8e-11  Score=67.32  Aligned_cols=71  Identities=27%  Similarity=0.503  Sum_probs=51.1

Q ss_pred             CEEeeecCCCCCCCCCHH---HHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCC-----HHHHhcCcccccc
Q psy10832          1 MVVEMVDGEPPFFNEPPL---QAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRAT-----AAELLQHPFLRQA   72 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~-----~~~l~~~~~~~~~   72 (90)
                      ++|+|++|..||......   .....+....  ....+..+++++.+++..||..||.+|++     +.++++|+||...
T Consensus       190 ~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~~  267 (285)
T cd05630         190 LLYEMIAGQSPFQQRKKKIKREEVERLVKEV--QEEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQI  267 (285)
T ss_pred             HHHHHHhCCCCCCCCCccchHHHHHhhhhhh--hhhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhhcc
Confidence            368899999999864321   1222221111  11234567899999999999999999998     8999999999864


Q ss_pred             C
Q psy10832         73 G   73 (90)
Q Consensus        73 ~   73 (90)
                      .
T Consensus       268 ~  268 (285)
T cd05630         268 N  268 (285)
T ss_pred             C
Confidence            3

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.05  E-value=3e-10  Score=65.57  Aligned_cols=38  Identities=34%  Similarity=0.646  Sum_probs=34.4

Q ss_pred             CCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCCC
Q psy10832         38 VSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPP   75 (90)
Q Consensus        38 ~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~~   75 (90)
                      ++.++++++.+||..+|++||++.+++.|+||......
T Consensus       259 ~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~~  296 (308)
T cd06615         259 FSDEFQDFVDKCLKKNPKERADLKELTKHPFIKRAELE  296 (308)
T ss_pred             cCHHHHHHHHHHccCChhhCcCHHHHhcChhhhhcccc
Confidence            67889999999999999999999999999999875444

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.05  E-value=4.4e-10  Score=66.68  Aligned_cols=73  Identities=23%  Similarity=0.507  Sum_probs=53.0

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCC-CCCCCCCCCCCHHHHHHHHHhhc--cCCCCCCCHHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMP-PPKLKNTHKVSPRLQGFLERLLV--RDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~i~~~l~--~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      ++|+|++|..||...+.......+.... ....+....++++++++|.+++.  .++..|+++.+++.|+||....
T Consensus       237 il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp~f~~~~  312 (381)
T cd05626         237 ILFEMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAHPFFSEVD  312 (381)
T ss_pred             HHHHHHhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCcccCCCC
Confidence            4789999999999877665555554321 22233334579999999998554  4555699999999999998754

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.05  E-value=2.9e-10  Score=66.38  Aligned_cols=37  Identities=24%  Similarity=0.617  Sum_probs=33.8

Q ss_pred             CCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832         37 KVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus        37 ~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      .++.++++|+.+||..||.+|+++.+++.|+||+...
T Consensus       270 ~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~  306 (333)
T cd06650         270 VFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSE  306 (333)
T ss_pred             CcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhcCc
Confidence            3578899999999999999999999999999998754

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.04  E-value=2.9e-10  Score=64.64  Aligned_cols=70  Identities=30%  Similarity=0.533  Sum_probs=49.1

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcC-CCCC-----------------C---------CCCCCCCHHHHHHHHHhhccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDM-PPPK-----------------L---------KNTHKVSPRLQGFLERLLVRD   53 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~-~~~~-----------------~---------~~~~~~~~~~~~~i~~~l~~~   53 (90)
                      ++|+|++|.++|.+.........+... ..+.                 .         ......+..+.+++..||..+
T Consensus       190 ~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  269 (286)
T cd07832         190 IFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYD  269 (286)
T ss_pred             HHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccC
Confidence            367899999888877655444333221 0000                 0         001235688999999999999


Q ss_pred             CCCCCCHHHHhcCcccc
Q psy10832         54 PLQRATAAELLQHPFLR   70 (90)
Q Consensus        54 p~~R~~~~~l~~~~~~~   70 (90)
                      |.+|+++++++.|+||.
T Consensus       270 p~~R~~~~~~l~h~~~~  286 (286)
T cd07832         270 PSKRLSAAEALRHPYFT  286 (286)
T ss_pred             hhhCCCHHHHhhCcCcC
Confidence            99999999999999984

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.04  E-value=6e-10  Score=66.02  Aligned_cols=72  Identities=21%  Similarity=0.449  Sum_probs=54.4

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCC-CCCCCCCCCCHHHHHHHHHhhccCCC--CCCCHHHHhcCcccccc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPP-PKLKNTHKVSPRLQGFLERLLVRDPL--QRATAAELLQHPFLRQA   72 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~p~--~R~~~~~l~~~~~~~~~   72 (90)
                      ++|+|++|..||.+.+.......+..... ..++....++..+++++.+||..++.  .|+++.++++||||+..
T Consensus       236 ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~~~~~  310 (370)
T cd05621         236 FLFEMLVGDTPFYADSLVGTYSKIMDHKNSLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKND  310 (370)
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHhCCcccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcCcccCCC
Confidence            47899999999999887777776665321 22322335799999999999975443  38899999999999864

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.04  E-value=2.9e-10  Score=65.14  Aligned_cols=75  Identities=23%  Similarity=0.378  Sum_probs=52.0

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCC-CC---------------------CC---CCCCCCCHHHHHHHHHhhccCCC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMP-PP---------------------KL---KNTHKVSPRLQGFLERLLVRDPL   55 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~-~~---------------------~~---~~~~~~~~~~~~~i~~~l~~~p~   55 (90)
                      ++|+|++|.+||.+.........+.... .+                     ..   ......+..+.+++.+||..+|.
T Consensus       192 il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~  271 (298)
T cd07841         192 IFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPN  271 (298)
T ss_pred             HHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcc
Confidence            3678999988888766544333332110 00                     00   01123467899999999999999


Q ss_pred             CCCCHHHHhcCccccccCCC
Q psy10832         56 QRATAAELLQHPFLRQAGPP   75 (90)
Q Consensus        56 ~R~~~~~l~~~~~~~~~~~~   75 (90)
                      +|+++.+++.|+||.+....
T Consensus       272 ~R~s~~e~l~~~~~~~~~~~  291 (298)
T cd07841         272 KRITARQALEHPYFSNDPAP  291 (298)
T ss_pred             cCcCHHHHhhCccccCCCCC
Confidence            99999999999999986543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.03  E-value=1.5e-10  Score=66.75  Aligned_cols=36  Identities=39%  Similarity=0.656  Sum_probs=32.7

Q ss_pred             CCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832         38 VSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus        38 ~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      ++.++.+++..||..||++|+++++++.||||....
T Consensus       267 ~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~~~  302 (314)
T cd08216         267 FSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQCK  302 (314)
T ss_pred             HHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhhhc
Confidence            346788999999999999999999999999999765

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.03  E-value=2.2e-10  Score=66.76  Aligned_cols=40  Identities=43%  Similarity=0.627  Sum_probs=35.5

Q ss_pred             CCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCCCc
Q psy10832         37 KVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPPA   76 (90)
Q Consensus        37 ~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~~~   76 (90)
                      ..+.++.++|..||..+|++||++.+++.|+||.......
T Consensus       265 ~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~~~~~~  304 (334)
T cd07855         265 KASPEALDLLSQMLQFDPEERITVEQALQHPFLAQYHDPD  304 (334)
T ss_pred             cCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhhccCCc
Confidence            4588999999999999999999999999999998765444

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.03  E-value=1.9e-10  Score=66.90  Aligned_cols=36  Identities=39%  Similarity=0.659  Sum_probs=32.7

Q ss_pred             CCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832         38 VSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus        38 ~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      ++..+.+++.+||..||.+|+++.++++|+||....
T Consensus       280 ~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~~  315 (328)
T cd08226         280 FSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQVK  315 (328)
T ss_pred             hhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHHH
Confidence            467789999999999999999999999999998654

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>PHA02988 hypothetical protein; Provisional

Probab=99.03  E-value=4.6e-10  Score=64.23  Aligned_cols=64  Identities=20%  Similarity=0.260  Sum_probs=50.0

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      ++|||++|..||.+.+.......+..... ....+...++.+++++.+||..||.+||++.+++.
T Consensus       211 il~el~~g~~Pf~~~~~~~~~~~i~~~~~-~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~  274 (283)
T PHA02988        211 VLWEIFTGKIPFENLTTKEIYDLIINKNN-SLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILY  274 (283)
T ss_pred             HHHHHHHCCCCCCCCCHHHHHHHHHhcCC-CCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHH
Confidence            46899999999998877766666644322 23334457899999999999999999999998863

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.03  E-value=3.2e-10  Score=65.12  Aligned_cols=69  Identities=26%  Similarity=0.470  Sum_probs=48.4

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcC-CCC------------CC-------C-------CCCCCCHHHHHHHHHhhccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDM-PPP------------KL-------K-------NTHKVSPRLQGFLERLLVRD   53 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~-~~~------------~~-------~-------~~~~~~~~~~~~i~~~l~~~   53 (90)
                      ++|+|++|.+||.+.+.......+... ..+            ..       .       ....+...+.+++.+||..+
T Consensus       216 il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~  295 (311)
T cd07866         216 VFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLD  295 (311)
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccC
Confidence            368999999999887665443333210 000            00       0       01234577899999999999


Q ss_pred             CCCCCCHHHHhcCccc
Q psy10832         54 PLQRATAAELLQHPFL   69 (90)
Q Consensus        54 p~~R~~~~~l~~~~~~   69 (90)
                      |.+|+++.+++.|+||
T Consensus       296 p~~R~t~~ell~~~~f  311 (311)
T cd07866         296 PYKRLTASDALEHPYF  311 (311)
T ss_pred             cccCcCHHHHhcCCCC
Confidence            9999999999999997

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.03  E-value=3.5e-10  Score=65.86  Aligned_cols=70  Identities=21%  Similarity=0.357  Sum_probs=51.3

Q ss_pred             CEEeeecCCCCCCCC------CHHH-HHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCC------HHHHhcCc
Q psy10832          1 MVVEMVDGEPPFFNE------PPLQ-AMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRAT------AAELLQHP   67 (90)
Q Consensus         1 il~~~~~g~~p~~~~------~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~------~~~l~~~~   67 (90)
                      ++|+|++|..||...      .... ....+...   ....+..++..+.+++.+||..||.+|++      +.+++.|+
T Consensus       185 il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~---~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~  261 (327)
T cd05617         185 LMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEK---PIRIPRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHT  261 (327)
T ss_pred             HHHHHHhCCCCCCccCCCcccccHHHHHHHHHhC---CCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCC
Confidence            468999999999632      1222 22333333   23345678999999999999999999987      57999999


Q ss_pred             cccccC
Q psy10832         68 FLRQAG   73 (90)
Q Consensus        68 ~~~~~~   73 (90)
                      ||....
T Consensus       262 ~f~~~~  267 (327)
T cd05617         262 FFRSID  267 (327)
T ss_pred             CCCCCC
Confidence            998754

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.03  E-value=1.8e-10  Score=64.92  Aligned_cols=69  Identities=28%  Similarity=0.452  Sum_probs=49.8

Q ss_pred             CEEeeecCCCCCCCCCHH---HHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCcccc
Q psy10832          1 MVVEMVDGEPPFFNEPPL---QAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLR   70 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~   70 (90)
                      ++|+|++|..||......   .....+..... ....+..+++++.+++..|+..+|.+|+++.+++.|+||.
T Consensus       197 ~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~~~~~  268 (268)
T cd06630         197 VIIEMATAKPPWNAEKHSNHLALIFKIASATT-APSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKHPVFR  268 (268)
T ss_pred             HHHHHHhCCCCCCCCCCcchHHHHHHHhccCC-CCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcCcccC
Confidence            367899999999754322   22222222211 2233456789999999999999999999999999999984

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.02  E-value=4.9e-10  Score=63.40  Aligned_cols=69  Identities=35%  Similarity=0.601  Sum_probs=49.3

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCC-CCCC--CCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMP-PPKL--KNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFL   69 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~-~~~~--~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~   69 (90)
                      ++|++++|..||...........+.... .+..  .....++..+.+++..|+..+|..||++.+++.|+|+
T Consensus       201 ~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~  272 (272)
T cd06629         201 VVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQHPFI  272 (272)
T ss_pred             HHHHHHhCCCCCcCcchHHHHHHhhccccCCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhCCCC
Confidence            3678999999997665443333322221 1111  1123468899999999999999999999999999996

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.02  E-value=3.6e-10  Score=64.31  Aligned_cols=33  Identities=42%  Similarity=0.731  Sum_probs=31.2

Q ss_pred             CCCHHHHHHHHHhhccCCCCCCCHHHHhcCccc
Q psy10832         37 KVSPRLQGFLERLLVRDPLQRATAAELLQHPFL   69 (90)
Q Consensus        37 ~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~   69 (90)
                      .+++++++++.+||..||.+|+++.+++.|+||
T Consensus       252 ~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~f  284 (284)
T cd07839         252 KLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF  284 (284)
T ss_pred             cCCHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence            467899999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.02  E-value=2.3e-10  Score=64.90  Aligned_cols=69  Identities=26%  Similarity=0.453  Sum_probs=48.9

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcC-CCCC--------------------------CCCCCCCCHHHHHHHHHhhccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDM-PPPK--------------------------LKNTHKVSPRLQGFLERLLVRD   53 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~-~~~~--------------------------~~~~~~~~~~~~~~i~~~l~~~   53 (90)
                      ++|+|++|..||.+.+.......+... ..+.                          ......++.++.++|.+||..+
T Consensus       188 ~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~  267 (283)
T cd05118         188 IFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYD  267 (283)
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccC
Confidence            368899999999887655443333210 0000                          0011235788999999999999


Q ss_pred             CCCCCCHHHHhcCccc
Q psy10832         54 PLQRATAAELLQHPFL   69 (90)
Q Consensus        54 p~~R~~~~~l~~~~~~   69 (90)
                      |.+||++.+++.||||
T Consensus       268 P~~Rp~~~~ll~~~~~  283 (283)
T cd05118         268 PHKRITAEQALAHPYF  283 (283)
T ss_pred             cccCcCHHHHhhCCCC
Confidence            9999999999999997

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.02  E-value=3.5e-10  Score=68.93  Aligned_cols=69  Identities=23%  Similarity=0.353  Sum_probs=57.0

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQ   71 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~   71 (90)
                      ++|+|++|..||.+.+.......+..+...  ..+..++.++.+++..||..+|.+||++.+++.|+|+..
T Consensus       260 ~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~--~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~~~~~~  328 (478)
T PTZ00267        260 ILYELLTLHRPFKGPSQREIMQQVLYGKYD--PFPCPVSSGMKALLDPLLSKNPALRPTTQQLLHTEFLKY  328 (478)
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHhCCCC--CCCccCCHHHHHHHHHHhccChhhCcCHHHHHhCHHHHH
Confidence            468999999999988887777776655432  234567899999999999999999999999999999864

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.02  E-value=3e-10  Score=64.92  Aligned_cols=75  Identities=25%  Similarity=0.402  Sum_probs=53.9

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCC-CCCCCCCCCCCHHHHHHHHHhhccCCCCCCC-----HHHHhcCccccccCC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMP-PPKLKNTHKVSPRLQGFLERLLVRDPLQRAT-----AAELLQHPFLRQAGP   74 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~-----~~~l~~~~~~~~~~~   74 (90)
                      ++|+|++|..||.+.........+.... ......+..++..+.+++..|+..+|.+|++     +.+++.|+||.....
T Consensus       190 ~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~~  269 (285)
T cd05632         190 LIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNMNF  269 (285)
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHHhhhccccccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcChhhhcCCH
Confidence            3688999999998765543322222110 0122234567899999999999999999999     889999999997653


Q ss_pred             C
Q psy10832         75 P   75 (90)
Q Consensus        75 ~   75 (90)
                      .
T Consensus       270 ~  270 (285)
T cd05632         270 K  270 (285)
T ss_pred             H
Confidence            3

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.01  E-value=5.2e-10  Score=63.16  Aligned_cols=68  Identities=35%  Similarity=0.625  Sum_probs=48.0

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCC--CCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCcc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPP--PKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPF   68 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~   68 (90)
                      ++|+|++|..||.................  +.......++..+.+++.+||..+|++|+++.+++.|||
T Consensus       198 il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~~~  267 (267)
T cd06645         198 TAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQHPF  267 (267)
T ss_pred             HHHHHhcCCCCcccccchhhHHhhhccCCCCCcccccCCCCHHHHHHHHHHccCCchhCcCHHHHhcCCC
Confidence            36789999999876544333322222221  111112246789999999999999999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.01  E-value=3.8e-10  Score=64.23  Aligned_cols=33  Identities=30%  Similarity=0.492  Sum_probs=31.1

Q ss_pred             CCCHHHHHHHHHhhccCCCCCCCHHHHhcCccc
Q psy10832         37 KVSPRLQGFLERLLVRDPLQRATAAELLQHPFL   69 (90)
Q Consensus        37 ~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~   69 (90)
                      .++..+.+++.+||..+|.+||++.+++.|+||
T Consensus       254 ~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~  286 (286)
T cd07846         254 KLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF  286 (286)
T ss_pred             CcCHHHHHHHHHHhcCCcccchhHHHHhcCCCC
Confidence            567889999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>KOG4645|consensus

Probab=99.01  E-value=6.5e-10  Score=73.31  Aligned_cols=72  Identities=29%  Similarity=0.456  Sum_probs=60.7

Q ss_pred             CEEeeecCCCCCCC-CCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCC
Q psy10832          1 MVVEMVDGEPPFFN-EPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGP   74 (90)
Q Consensus         1 il~~~~~g~~p~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~   74 (90)
                      +..||++|+.||.. ++...++..+..+..|.  .|..++.++++||..||..||..|.++.+|+.|.|-+...+
T Consensus      1430 VVlEM~tGkrPW~~~dne~aIMy~V~~gh~Pq--~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~f~~~~~d 1502 (1509)
T KOG4645|consen 1430 VVLEMATGKRPWAELDNEWAIMYHVAAGHKPQ--IPERLSSEGRDFLEHCLEQDPKMRWTASQLLEHAFGKSCTD 1502 (1509)
T ss_pred             eEEEeecCCCchhhccchhHHHhHHhccCCCC--CchhhhHhHHHHHHHHHhcCchhhhHHHHHHHhhccccccc
Confidence            46799999999997 46778888888886444  46679999999999999999999999999999998775443

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.01  E-value=7.1e-10  Score=62.06  Aligned_cols=66  Identities=23%  Similarity=0.339  Sum_probs=53.2

Q ss_pred             EEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccc
Q psy10832          2 VVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFL   69 (90)
Q Consensus         2 l~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~   69 (90)
                      +|+|++|..||...+.......+.....+..  +..++.++.+++.+|+..+|..||++.++++||++
T Consensus       191 ~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~p~~  256 (256)
T cd08530         191 LYEMATFAPPFEARSMQDLRYKVQRGKYPPI--PPIYSQDLQNFIRSMLQVKPKLRPNCDKILASPAV  256 (256)
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHhcCCCCCC--chhhCHHHHHHHHHHcCCCcccCCCHHHHhcCCCC
Confidence            5789999999998877666666555433222  34678999999999999999999999999999974

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.01  E-value=3.1e-10  Score=66.61  Aligned_cols=36  Identities=28%  Similarity=0.515  Sum_probs=32.0

Q ss_pred             CCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832         38 VSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus        38 ~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      .+..+++++.+||..||.+|+++.+++.|+||..+.
T Consensus       283 ~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~~~~  318 (353)
T cd07850         283 KASQARDLLSKMLVIDPEKRISVDDALQHPYINVWY  318 (353)
T ss_pred             chhHHHHHHHHHcCCChhhCcCHHHHhcChhHhhcc
Confidence            355789999999999999999999999999998644

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.00  E-value=4.9e-10  Score=64.34  Aligned_cols=31  Identities=35%  Similarity=0.664  Sum_probs=29.3

Q ss_pred             CHHHHHHHHHhhccCCCCCCCHHHHhcCccc
Q psy10832         39 SPRLQGFLERLLVRDPLQRATAAELLQHPFL   69 (90)
Q Consensus        39 ~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~   69 (90)
                      +..+.++|..||..||.+|++++++++|+||
T Consensus       280 ~~~~~dli~~~l~~~P~~R~t~~e~l~h~~f  310 (310)
T cd07865         280 DPHALDLIDKLLVLDPAKRIDADTALNHDFF  310 (310)
T ss_pred             CHHHHHHHHHHhcCChhhccCHHHHhcCCCC
Confidence            5678899999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.00  E-value=1.7e-10  Score=65.72  Aligned_cols=71  Identities=20%  Similarity=0.344  Sum_probs=50.7

Q ss_pred             CEEeeecCCCCCCCCCH----HHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCH----HHHhcCcccccc
Q psy10832          1 MVVEMVDGEPPFFNEPP----LQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA----AELLQHPFLRQA   72 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~----~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~----~~l~~~~~~~~~   72 (90)
                      ++|+|++|..||.+...    ......+..... .. ....++.++++++..||..||.+|+++    ++++.|+||.+.
T Consensus       183 ~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f~~~  260 (277)
T cd05607         183 SIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEV-KF-EHQNFTEESKDICRLFLAKKPEDRLGSREKNDDPRKHEFFKTI  260 (277)
T ss_pred             HHHHHHhCCCCCCCCcchhhHHHHHHHhhcccc-cc-ccccCCHHHHHHHHHHhccCHhhCCCCccchhhhhcChhhcCC
Confidence            36899999999986432    222233222211 11 123578999999999999999999998    678899999875


Q ss_pred             C
Q psy10832         73 G   73 (90)
Q Consensus        73 ~   73 (90)
                      .
T Consensus       261 ~  261 (277)
T cd05607         261 N  261 (277)
T ss_pred             C
Confidence            4

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.00  E-value=2.9e-10  Score=65.71  Aligned_cols=31  Identities=29%  Similarity=0.649  Sum_probs=29.3

Q ss_pred             CHHHHHHHHHhhccCCCCCCCHHHHhcCccc
Q psy10832         39 SPRLQGFLERLLVRDPLQRATAAELLQHPFL   69 (90)
Q Consensus        39 ~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~   69 (90)
                      +.++.+++.+||..||.+|++++++++||||
T Consensus       287 ~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07868         287 DSKAFHLLQKLLTMDPIKRITSEQAMQDPYF  317 (317)
T ss_pred             ChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence            5678999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.00  E-value=7.6e-10  Score=65.28  Aligned_cols=72  Identities=18%  Similarity=0.356  Sum_probs=53.2

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCC-CCCCCCCCCCHHHHHHHHHhhccCCC---CCCCHHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPP-PKLKNTHKVSPRLQGFLERLLVRDPL---QRATAAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~p~---~R~~~~~l~~~~~~~~~~   73 (90)
                      ++|+|++|..||.+.+.......+..... ..++....+++++++++.+++. ++.   .|++++++++||||.+..
T Consensus       225 il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~~~~r~~r~~~~ei~~hp~f~~~~  300 (363)
T cd05628         225 IMYEMLIGYPPFCSETPQETYKKVMNWKETLIFPPEVPISEKAKDLILRFCC-EWEHRIGAPGVEEIKTNPFFEGVD  300 (363)
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHcCcCcccCCCcCCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhCCCCCCCCC
Confidence            47899999999999888777777765321 2222223478999999998764 343   567899999999998764

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=98.99  E-value=6.5e-10  Score=63.59  Aligned_cols=69  Identities=25%  Similarity=0.419  Sum_probs=48.7

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCC---------------------C-------CCCCCCCC-CCHHHHHHHHHhhc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMP---------------------P-------PKLKNTHK-VSPRLQGFLERLLV   51 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~---------------------~-------~~~~~~~~-~~~~~~~~i~~~l~   51 (90)
                      ++|+|++|.+||.+.........+...-                     .       .....+.. +++.+.+++..||.
T Consensus       196 ~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  275 (293)
T cd07843         196 IFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLT  275 (293)
T ss_pred             HHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhc
Confidence            3678999999998876554433322100                     0       00001112 58889999999999


Q ss_pred             cCCCCCCCHHHHhcCccc
Q psy10832         52 RDPLQRATAAELLQHPFL   69 (90)
Q Consensus        52 ~~p~~R~~~~~l~~~~~~   69 (90)
                      .+|++|+++.+++.|+||
T Consensus       276 ~~p~~R~t~~ell~~~~f  293 (293)
T cd07843         276 YDPAKRISAEDALKHPYF  293 (293)
T ss_pred             cCccccCCHHHHhcCCCC
Confidence            999999999999999997

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=98.99  E-value=4e-10  Score=64.04  Aligned_cols=69  Identities=23%  Similarity=0.403  Sum_probs=49.1

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCC------------------CC---C---CCCCCCCHHHHHHHHHhhccCCCC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPP------------------PK---L---KNTHKVSPRLQGFLERLLVRDPLQ   56 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~------------------~~---~---~~~~~~~~~~~~~i~~~l~~~p~~   56 (90)
                      ++|+|++|.+||.+.........+.....                  +.   .   .....+++.+.+++.+||..||.+
T Consensus       195 ~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~  274 (287)
T cd07838         195 IFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHK  274 (287)
T ss_pred             HHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCcc
Confidence            36789999999998776655444432100                  00   0   000134577899999999999999


Q ss_pred             CCCHHHHhcCccc
Q psy10832         57 RATAAELLQHPFL   69 (90)
Q Consensus        57 R~~~~~l~~~~~~   69 (90)
                      ||++.+++.|+||
T Consensus       275 Rp~~~~il~~~~~  287 (287)
T cd07838         275 RISAFEALQHPYF  287 (287)
T ss_pred             CCCHHHHhcCcCC
Confidence            9999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=98.98  E-value=6.1e-10  Score=63.38  Aligned_cols=75  Identities=25%  Similarity=0.443  Sum_probs=51.7

Q ss_pred             CEEeeecCCCCCCCCCH-------HHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPP-------LQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~-------~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      ++|+|++|..||.....       ......+.....+.. .....++++.+++.+|+..+|.+||++.+++.|+||....
T Consensus       182 ~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~~~~~~  260 (279)
T cd06619         182 SFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVL-PVGQFSEKFVHFITQCMRKQPKERPAPENLMDHPFIVQYN  260 (279)
T ss_pred             HHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCC-CCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCccccccc
Confidence            36889999999975321       111222222221121 1234688999999999999999999999999999998765


Q ss_pred             CCc
Q psy10832         74 PPA   76 (90)
Q Consensus        74 ~~~   76 (90)
                      ...
T Consensus       261 ~~~  263 (279)
T cd06619         261 DGN  263 (279)
T ss_pred             Ccc
Confidence            443

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=98.98  E-value=9.6e-10  Score=60.73  Aligned_cols=68  Identities=38%  Similarity=0.710  Sum_probs=49.8

Q ss_pred             EEeeecCCCCCCC-CCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccc
Q psy10832          2 VVEMVDGEPPFFN-EPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFL   69 (90)
Q Consensus         2 l~~~~~g~~p~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~   69 (90)
                      +|++++|..||.. .........+.............++.++.+++..|+..+|.+||++.++++|+||
T Consensus       176 l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~~~~~  244 (244)
T smart00220      176 LYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWKISPEAKDLIRKLLVKDPEKRLTAEEALQHPFF  244 (244)
T ss_pred             HHHHHhCCCCCCCCCcHHHHHHHHhccCCCCccccccCCHHHHHHHHHHccCCchhccCHHHHhhCCCC
Confidence            5788999999987 4444444444433222111111278999999999999999999999999999997

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=98.98  E-value=6.5e-10  Score=63.25  Aligned_cols=32  Identities=47%  Similarity=0.687  Sum_probs=30.5

Q ss_pred             CCHHHHHHHHHhhccCCCCCCCHHHHhcCccc
Q psy10832         38 VSPRLQGFLERLLVRDPLQRATAAELLQHPFL   69 (90)
Q Consensus        38 ~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~   69 (90)
                      ++.++.+++..||..+|++||++++++.|+||
T Consensus       257 ~~~~~~~li~~~l~~~p~~Rps~~~il~~~~f  288 (288)
T cd07833         257 VSSPALDFLKACLRMDPKERLTCDELLQHPYF  288 (288)
T ss_pred             cchHHHHHHHHHhccCchhcccHHHHhcCCCC
Confidence            47889999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=98.98  E-value=4.4e-10  Score=63.88  Aligned_cols=69  Identities=28%  Similarity=0.433  Sum_probs=48.1

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCC-CC----------------CCC---------CCCCCCHHHHHHHHHhhccCC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMP-PP----------------KLK---------NTHKVSPRLQGFLERLLVRDP   54 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~-~~----------------~~~---------~~~~~~~~~~~~i~~~l~~~p   54 (90)
                      ++|+|++|.+||.+.+.......+.... .+                ...         .....+..+++++.+|+..+|
T Consensus       190 ~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p  269 (284)
T cd07836         190 IMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNP  269 (284)
T ss_pred             HHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCc
Confidence            3678999999998766544333322100 00                000         012346788999999999999


Q ss_pred             CCCCCHHHHhcCccc
Q psy10832         55 LQRATAAELLQHPFL   69 (90)
Q Consensus        55 ~~R~~~~~l~~~~~~   69 (90)
                      .+|+++.+++.|+||
T Consensus       270 ~~R~~~~~~l~~~~f  284 (284)
T cd07836         270 ELRISAHDALQHPWF  284 (284)
T ss_pred             ccCCCHHHHhcCCCC
Confidence            999999999999997

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=98.97  E-value=3.5e-10  Score=63.86  Aligned_cols=68  Identities=34%  Similarity=0.628  Sum_probs=48.0

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCC--CCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCcc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMP--PPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPF   68 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~   68 (90)
                      ++|+|++|..||...........+....  .+.......++..+.+++.+||..+|++||++++++.|.|
T Consensus       198 il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l~  267 (267)
T cd06646         198 TAIELAELQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHLF  267 (267)
T ss_pred             HHHHHHhCCCCccccchhhhheeeecCCCCCCCCccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCCC
Confidence            3688999999997654433322222221  1122222356889999999999999999999999999987

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=98.96  E-value=4e-09  Score=59.19  Aligned_cols=64  Identities=16%  Similarity=0.262  Sum_probs=50.9

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQH   66 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~   66 (90)
                      ++|+|++|..||...+.......+..+....  .+..++..+.+++.+||..+|.+||++.+++.-
T Consensus       189 i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  252 (255)
T cd08219         189 ILYELCTLKHPFQANSWKNLILKVCQGSYKP--LPSHYSYELRSLIKQMFKRNPRSRPSATTILSR  252 (255)
T ss_pred             hheehhhccCCCCCCCHHHHHHHHhcCCCCC--CCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence            4789999999999887776666665553322  234678899999999999999999999998753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=98.96  E-value=1.4e-09  Score=64.50  Aligned_cols=72  Identities=17%  Similarity=0.400  Sum_probs=54.3

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCC-CCCCCCCCCCCHHHHHHHHHhhccCCC--CCCCHHHHhcCcccccc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMP-PPKLKNTHKVSPRLQGFLERLLVRDPL--QRATAAELLQHPFLRQA   72 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~i~~~l~~~p~--~R~~~~~l~~~~~~~~~   72 (90)
                      ++|+|++|..||.+.+.......+.... ...++....++..++++|..||..++.  .|+++.++++|+||.+.
T Consensus       236 ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~~~~~  310 (371)
T cd05622         236 FLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKND  310 (371)
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHcCCCcccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCcccCCC
Confidence            4789999999999988777777766532 123333346899999999999974333  26789999999999864

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=98.96  E-value=1.4e-09  Score=61.98  Aligned_cols=72  Identities=28%  Similarity=0.467  Sum_probs=50.8

Q ss_pred             CEEeeecCCCCCCCCCHH-----------HHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccc
Q psy10832          1 MVVEMVDGEPPFFNEPPL-----------QAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFL   69 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~-----------~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~   69 (90)
                      ++|++++|..||......           .....+.....+... ...++.++.+++..|+..||.+||++.++++|+||
T Consensus       191 ~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~  269 (284)
T cd06620         191 SIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLP-SSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPF  269 (284)
T ss_pred             HHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCCCCC-chhcCHHHHHHHHHHhcCCcccCcCHHHHhcCccc
Confidence            367899999999865431           222333333222221 12367889999999999999999999999999998


Q ss_pred             cccC
Q psy10832         70 RQAG   73 (90)
Q Consensus        70 ~~~~   73 (90)
                      ....
T Consensus       270 ~~~~  273 (284)
T cd06620         270 IQAL  273 (284)
T ss_pred             cccc
Confidence            7543

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=98.96  E-value=1.1e-09  Score=62.07  Aligned_cols=69  Identities=28%  Similarity=0.561  Sum_probs=48.5

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcC--------------------CCCCC------CCCCCCCHHHHHHHHHhhccCC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDM--------------------PPPKL------KNTHKVSPRLQGFLERLLVRDP   54 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~--------------------~~~~~------~~~~~~~~~~~~~i~~~l~~~p   54 (90)
                      ++|+|++|.+||.+.+.......+...                    ..+..      ......+..+.+++.+||..+|
T Consensus       188 ~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P  267 (282)
T cd07829         188 IFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNP  267 (282)
T ss_pred             HHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccccccCccchHHhcccccHHHHHHHHHhhccCc
Confidence            367899999999887654443333210                    00000      0011347789999999999999


Q ss_pred             CCCCCHHHHhcCccc
Q psy10832         55 LQRATAAELLQHPFL   69 (90)
Q Consensus        55 ~~R~~~~~l~~~~~~   69 (90)
                      .+|+++.+++.||||
T Consensus       268 ~~Rp~~~~~l~~p~~  282 (282)
T cd07829         268 AKRISAKEALKHPYF  282 (282)
T ss_pred             ccCCCHHHHhhCcCC
Confidence            999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=98.95  E-value=1.7e-09  Score=63.11  Aligned_cols=73  Identities=23%  Similarity=0.410  Sum_probs=53.9

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCC--CCCCCCCCCCHHHHHHHHHhhccCC--CCCCCHHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPP--PKLKNTHKVSPRLQGFLERLLVRDP--LQRATAAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~i~~~l~~~p--~~R~~~~~l~~~~~~~~~~   73 (90)
                      ++|+|++|..||.+.+.......+.....  ........++.++++++.+|+..++  ..|+++.++++|+||.+..
T Consensus       197 il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~~f~~~~  273 (332)
T cd05623         197 CMYEMLYGETPFYAESLVETYGKIMNHKERFQFPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQHPFFTGID  273 (332)
T ss_pred             HHHHHhcCCCCCCCCCHHHHHHHHhCCCccccCCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCCCCcCCCC
Confidence            46899999999999887777777655421  1112223578999999999986543  3467899999999998754

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=98.95  E-value=7.5e-10  Score=64.60  Aligned_cols=37  Identities=32%  Similarity=0.616  Sum_probs=33.6

Q ss_pred             CCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832         37 KVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus        37 ~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      ..++++.+++.+||..+|.+|+++.+++.|+||....
T Consensus       263 ~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~  299 (336)
T cd07849         263 NADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYH  299 (336)
T ss_pred             ccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccC
Confidence            4578899999999999999999999999999998654

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>KOG0586|consensus

Probab=98.95  E-value=3.1e-10  Score=69.66  Aligned_cols=72  Identities=17%  Similarity=0.280  Sum_probs=63.4

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCCC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPP   75 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~~   75 (90)
                      ++|.|+.|..||++.+...+......+   .+..+..++.++.++|+++|..+|.+|+++++++.|.|.......
T Consensus       244 vly~LV~GsLPFDG~~lk~Lr~rvl~g---k~rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~~~~~  315 (596)
T KOG0586|consen  244 VLYALVEGSLPFDGQNLKELRPRVLRG---KYRIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWRNDLLEA  315 (596)
T ss_pred             hheeeeecccccCCcccccccchheee---eecccceeechhHHHHHHhhccCccccCCHHHhhhhcccchhhhh
Confidence            579999999999999888887777777   566677889999999999999999999999999999999876554

>KOG0577|consensus

Probab=98.95  E-value=2.4e-09  Score=66.67  Aligned_cols=82  Identities=28%  Similarity=0.598  Sum_probs=72.1

Q ss_pred             EeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCCCcccHHHH
Q psy10832          3 VEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPPALLVPLM   82 (90)
Q Consensus         3 ~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~~~~~~~~~   82 (90)
                      .|+...++|+...+....+..|..+.+|.... ..|+..++.|+..||++-|..||+..+++.|+|+...+....+.+++
T Consensus       216 IELAERkPPlFnMNAMSALYHIAQNesPtLqs-~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~fv~R~Rp~tvi~dLI  294 (948)
T KOG0577|consen  216 IELAERKPPLFNMNAMSALYHIAQNESPTLQS-NEWSDYFRNFVDSCLQKIPQERPTSEELLKHRFVLRERPPTVIMDLI  294 (948)
T ss_pred             hhhhhcCCCccCchHHHHHHHHHhcCCCCCCC-chhHHHHHHHHHHHHhhCcccCCcHHHHhhcchhccCCCchHHHHHH
Confidence            46667789999999999999999988777764 56899999999999999999999999999999999888888888887


Q ss_pred             hhh
Q psy10832         83 KGS   85 (90)
Q Consensus        83 ~~~   85 (90)
                      ++-
T Consensus       295 qRT  297 (948)
T KOG0577|consen  295 QRT  297 (948)
T ss_pred             HHH
Confidence            754

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=98.95  E-value=1.1e-09  Score=62.23  Aligned_cols=69  Identities=26%  Similarity=0.513  Sum_probs=49.0

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCC-CCC---CC-----------------------CCCC-CCHHHHHHHHHhhcc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMP-PPK---LK-----------------------NTHK-VSPRLQGFLERLLVR   52 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~-~~~---~~-----------------------~~~~-~~~~~~~~i~~~l~~   52 (90)
                      ++|+|++|..||.+.+.......+.... .+.   ..                       .... .+..+.+++.+||..
T Consensus       191 ~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~  270 (287)
T cd07840         191 ILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTL  270 (287)
T ss_pred             HHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCC
Confidence            3678999999998877655444433210 000   00                       0011 278899999999999


Q ss_pred             CCCCCCCHHHHhcCccc
Q psy10832         53 DPLQRATAAELLQHPFL   69 (90)
Q Consensus        53 ~p~~R~~~~~l~~~~~~   69 (90)
                      +|.+||++.+++.|+||
T Consensus       271 ~P~~Rp~~~~~l~~~~~  287 (287)
T cd07840         271 DPKKRISADQALQHEYF  287 (287)
T ss_pred             ChhhCcCHHHHhhCcCC
Confidence            99999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=98.95  E-value=1.1e-10  Score=62.34  Aligned_cols=70  Identities=24%  Similarity=0.276  Sum_probs=46.8

Q ss_pred             CEEeeecCCCCCCCCCHH-HHHHHhhcCCCCC----CCCCCCCCH--HHHHHHHHhhccCCCCCCCHHHHhcCcccc
Q psy10832          1 MVVEMVDGEPPFFNEPPL-QAMRRIRDMPPPK----LKNTHKVSP--RLQGFLERLLVRDPLQRATAAELLQHPFLR   70 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~-~~~~~i~~~~~~~----~~~~~~~~~--~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~   70 (90)
                      ++|||++|..||...... .....+.......    ...+..++.  ++.+++.+||..+|..|+++.+++.|+|+.
T Consensus        93 il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~  169 (176)
T smart00750       93 TLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRAL  169 (176)
T ss_pred             HHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHH
Confidence            478999999999865432 2222222211111    011122333  689999999999999999999999999875

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=98.94  E-value=1.1e-09  Score=64.25  Aligned_cols=39  Identities=38%  Similarity=0.591  Sum_probs=34.9

Q ss_pred             CCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCCC
Q psy10832         37 KVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPP   75 (90)
Q Consensus        37 ~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~~   75 (90)
                      ..+..+.+++.+||..||.+|+++.+++.|+||......
T Consensus       269 ~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~~~~  307 (343)
T cd07880         269 NANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEFHDP  307 (343)
T ss_pred             CCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhhcCc
Confidence            567889999999999999999999999999999976533

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=98.93  E-value=6.6e-10  Score=65.15  Aligned_cols=40  Identities=35%  Similarity=0.497  Sum_probs=35.1

Q ss_pred             CCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCCCc
Q psy10832         37 KVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPPA   76 (90)
Q Consensus        37 ~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~~~   76 (90)
                      ..++++.++|..||..+|.+|+++.+++.|+||.....+.
T Consensus       271 ~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~~~~~~  310 (345)
T cd07877         271 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD  310 (345)
T ss_pred             CCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhhhcCCCC
Confidence            3578899999999999999999999999999999765443

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=98.93  E-value=1.4e-09  Score=62.41  Aligned_cols=68  Identities=26%  Similarity=0.430  Sum_probs=48.6

Q ss_pred             EEeeecCCCCCCCCCHHHHHHHhhc---CCCC-C---C--------------------CCCCCCCHHHHHHHHHhhccCC
Q psy10832          2 VVEMVDGEPPFFNEPPLQAMRRIRD---MPPP-K---L--------------------KNTHKVSPRLQGFLERLLVRDP   54 (90)
Q Consensus         2 l~~~~~g~~p~~~~~~~~~~~~i~~---~~~~-~---~--------------------~~~~~~~~~~~~~i~~~l~~~p   54 (90)
                      +|+|++|.+||...+.......+..   ...+ .   .                    .....++..+.+++..||..+|
T Consensus       208 ~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P  287 (302)
T cd07864         208 LGELFTKKPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDP  287 (302)
T ss_pred             HHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCCh
Confidence            5789999999987665444333322   1000 0   0                    0012357899999999999999


Q ss_pred             CCCCCHHHHhcCccc
Q psy10832         55 LQRATAAELLQHPFL   69 (90)
Q Consensus        55 ~~R~~~~~l~~~~~~   69 (90)
                      .+||++.+++.|+||
T Consensus       288 ~~Rp~~~~il~~~~~  302 (302)
T cd07864         288 SKRCTAEEALNSPWL  302 (302)
T ss_pred             hhCCCHHHHhcCCCC
Confidence            999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=98.93  E-value=3.5e-09  Score=61.79  Aligned_cols=73  Identities=23%  Similarity=0.423  Sum_probs=52.4

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCC--CCCCCCCCCCHHHHHHHHHhhccCC--CCCCCHHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPP--PKLKNTHKVSPRLQGFLERLLVRDP--LQRATAAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~i~~~l~~~p--~~R~~~~~l~~~~~~~~~~   73 (90)
                      ++|+|++|..||.+.+.......+.....  ........+++++++++.+||..++  ..|+++.+++.|+||.+..
T Consensus       197 ~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~~~~~~  273 (331)
T cd05597         197 CMYEMLYGETPFYAESLVETYGKIMNHKEHFQFPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDHPFFEGID  273 (331)
T ss_pred             HHHHHhhCCCCCCCCCHHHHHHHHHcCCCcccCCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCCCCCCCC
Confidence            47899999999998877766666654321  1111223478999999999886533  3477999999999998653

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>PHA03207 serine/threonine kinase US3; Provisional

Probab=98.92  E-value=4.1e-10  Score=67.08  Aligned_cols=37  Identities=16%  Similarity=0.318  Sum_probs=33.1

Q ss_pred             CCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832         37 KVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus        37 ~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      .++.++.++|.+||..+|++|+++.+++.||||....
T Consensus       346 ~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~~~  382 (392)
T PHA03207        346 GMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTKEP  382 (392)
T ss_pred             CcchhHHHHHHHHhccChhhCCCHHHHhhCchhhccc
Confidence            3567889999999999999999999999999998644

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=98.92  E-value=1.9e-09  Score=61.27  Aligned_cols=31  Identities=39%  Similarity=0.717  Sum_probs=29.7

Q ss_pred             CHHHHHHHHHhhccCCCCCCCHHHHhcCccc
Q psy10832         39 SPRLQGFLERLLVRDPLQRATAAELLQHPFL   69 (90)
Q Consensus        39 ~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~   69 (90)
                      +.++.+++..|+..+|.+||++.+++.|+||
T Consensus       253 ~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~~  283 (283)
T cd07830         253 SPEAIDLIKDMLRWDPKKRPTASQALQHPYF  283 (283)
T ss_pred             CHHHHHHHHHhcccCcccCCCHHHHhhCCCC
Confidence            6789999999999999999999999999997

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=98.92  E-value=1.3e-09  Score=62.90  Aligned_cols=32  Identities=31%  Similarity=0.580  Sum_probs=29.4

Q ss_pred             CCHHHHHHHHHhhccCCCCCCCHHHHhcCccc
Q psy10832         38 VSPRLQGFLERLLVRDPLQRATAAELLQHPFL   69 (90)
Q Consensus        38 ~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~   69 (90)
                      .+..+.+++.+||..||.+|+++.+++.||||
T Consensus       286 ~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07867         286 PDSKVFLLLQKLLTMDPTKRITSEQALQDPYF  317 (317)
T ss_pred             CChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence            35668899999999999999999999999997

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=98.92  E-value=1.6e-09  Score=61.91  Aligned_cols=71  Identities=28%  Similarity=0.477  Sum_probs=51.2

Q ss_pred             CEEeeecCCCCCCCCC----HHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCC---HHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEP----PLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRAT---AAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~---~~~l~~~~~~~~~~   73 (90)
                      ++|+|++|..||....    .......+...   ....+..++.++.+++.+||..+|+.|++   +.+++.|+||+...
T Consensus       197 il~el~tg~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~~~  273 (288)
T cd05583         197 LTFELLTGASPFTVDGEQNSQSEISRRILKS---KPPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQGID  273 (288)
T ss_pred             HHHHHHhCCCCcccCcccchHHHHHHHHHcc---CCCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCcccccCC
Confidence            3678999999996432    22222333333   22334567899999999999999999998   56789999998765


Q ss_pred             C
Q psy10832         74 P   74 (90)
Q Consensus        74 ~   74 (90)
                      +
T Consensus       274 ~  274 (288)
T cd05583         274 W  274 (288)
T ss_pred             H
Confidence            4

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>KOG0661|consensus

Probab=98.91  E-value=2e-09  Score=64.91  Aligned_cols=73  Identities=27%  Similarity=0.458  Sum_probs=56.6

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcC-CCCCCC--------------------------CCCCCCHHHHHHHHHhhccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDM-PPPKLK--------------------------NTHKVSPRLQGFLERLLVRD   53 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~-~~~~~~--------------------------~~~~~~~~~~~~i~~~l~~~   53 (90)
                      |++|+.+-++-|.|.+..+++.+|..- +.|...                          .....+.++.++|.+|+.+|
T Consensus       199 I~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WD  278 (538)
T KOG0661|consen  199 IMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWD  278 (538)
T ss_pred             HHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCC
Confidence            357888889999999999888887631 001100                          01347889999999999999


Q ss_pred             CCCCCCHHHHhcCccccccC
Q psy10832         54 PLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus        54 p~~R~~~~~l~~~~~~~~~~   73 (90)
                      |.+||++.++++||||+...
T Consensus       279 P~kRpTA~~al~~pffq~~~  298 (538)
T KOG0661|consen  279 PDKRPTASQALQHPFFQVGR  298 (538)
T ss_pred             CccCccHHHHhcCccccccc
Confidence            99999999999999998643

>KOG0612|consensus

Probab=98.90  E-value=9.1e-10  Score=71.84  Aligned_cols=74  Identities=23%  Similarity=0.406  Sum_probs=60.0

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCC-CCCCCCCCCCCHHHHHHHHHhhccCCCCCCC---HHHHhcCccccccCCC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMP-PPKLKNTHKVSPRLQGFLERLLVRDPLQRAT---AAELLQHPFLRQAGPP   75 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~---~~~l~~~~~~~~~~~~   75 (90)
                      ++|||+.|..||-.++......+|.+-. ...++....+|++++++|+.++ .+++.|.+   ++++..||||.+..|.
T Consensus       270 ~~YEMlyG~TPFYadslveTY~KIm~hk~~l~FP~~~~VSeeakdLI~~ll-~~~e~RLgrngiedik~HpFF~g~~W~  347 (1317)
T KOG0612|consen  270 FMYEMLYGETPFYADSLVETYGKIMNHKESLSFPDETDVSEEAKDLIEALL-CDREVRLGRNGIEDIKNHPFFEGIDWD  347 (1317)
T ss_pred             HHHHHHcCCCcchHHHHHHHHHHHhchhhhcCCCcccccCHHHHHHHHHHh-cChhhhcccccHHHHHhCccccCCChh
Confidence            3799999999999999888888887532 2233333568999999999987 77888888   9999999999997763

>KOG1006|consensus

Probab=98.90  E-value=6.2e-09  Score=59.33  Aligned_cols=73  Identities=21%  Similarity=0.353  Sum_probs=61.9

Q ss_pred             CEEeeecCCCCCCC-CCHHHHHHHhhcCCCCCCCCCCC---CCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFN-EPPLQAMRRIRDMPPPKLKNTHK---VSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~-~~~~~~~~~i~~~~~~~~~~~~~---~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      +|||+.+|..||.+ .+..+++..+..+.+|....+..   ++..+..||..||.+|-..||...++++++|..-..
T Consensus       258 TL~EvAtG~fPyr~w~svfeql~~Vv~gdpp~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~~fyr~y~  334 (361)
T KOG1006|consen  258 TLYEVATGNFPYRKWDSVFEQLCQVVIGDPPILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKFPFYRMYA  334 (361)
T ss_pred             eEeeeecCCCCcchHHHHHHHHHHHHcCCCCeecCcccccccCHHHHHHHHHHhhcccccCcchhhhhcCchhhhhh
Confidence            48999999999997 45667788888888776655544   789999999999999999999999999999987543

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=98.89  E-value=2e-09  Score=62.74  Aligned_cols=38  Identities=34%  Similarity=0.547  Sum_probs=34.1

Q ss_pred             CCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCC
Q psy10832         37 KVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGP   74 (90)
Q Consensus        37 ~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~   74 (90)
                      ..+..+.+++.+||..+|.+|+++.+++.|+|+.....
T Consensus       263 ~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~~~~~  300 (332)
T cd07857         263 NANPLALDLLEKLLAFDPTKRISVEEALEHPYLAIWHD  300 (332)
T ss_pred             CCCHHHHHHHHHHccCCcccCCCHHHHhcChhhhhhcC
Confidence            35788999999999999999999999999999986653

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=98.88  E-value=3.7e-09  Score=59.51  Aligned_cols=62  Identities=11%  Similarity=0.160  Sum_probs=49.7

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHh
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELL   64 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~   64 (90)
                      ++|||++ |..||.+.........+..+..  ...+...++++.++|..|+..||++||++.++.
T Consensus       187 ~l~el~t~g~~p~~~~~~~~~~~~i~~~~~--~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~  249 (257)
T cd05116         187 LMWEAFSYGQKPYKGMKGNEVTQMIESGER--MECPQRCPPEMYDLMKLCWTYGVDERPGFAVVE  249 (257)
T ss_pred             HHHHHHhCCCCCCCCCCHHHHHHHHHCCCC--CCCCCCCCHHHHHHHHHHhccCchhCcCHHHHH
Confidence            3688987 9999998877777777665532  233456899999999999999999999988875

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=98.88  E-value=2.6e-09  Score=62.33  Aligned_cols=37  Identities=41%  Similarity=0.574  Sum_probs=33.8

Q ss_pred             CCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832         37 KVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus        37 ~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      .++.++.+++.+||..+|.+|+++.+++.|+|+....
T Consensus       266 ~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~~  302 (337)
T cd07852         266 KASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQFH  302 (337)
T ss_pred             CCCHHHHHHHHHhccCCcccccCHHHHhhChhhhhhc
Confidence            3688999999999999999999999999999998754

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=98.88  E-value=1e-10  Score=65.62  Aligned_cols=68  Identities=29%  Similarity=0.594  Sum_probs=46.8

Q ss_pred             EEeeecCCCCCCCCCHHH---HHHHhhcCCCC-CCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccc
Q psy10832          2 VVEMVDGEPPFFNEPPLQ---AMRRIRDMPPP-KLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFL   69 (90)
Q Consensus         2 l~~~~~g~~p~~~~~~~~---~~~~i~~~~~~-~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~   69 (90)
                      +|+|++|..||.......   ........... ...........+.+++..||..||.+||++.++++||||
T Consensus       189 l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~~~~  260 (260)
T PF00069_consen  189 LYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLKHPWF  260 (260)
T ss_dssp             HHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred             cccccccccccccccchhhhhhhhhcccccccccccccchhHHHHHHHHHHHccCChhHCcCHHHHhcCCCC
Confidence            578999999999873222   22222221100 111111224899999999999999999999999999997

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=98.88  E-value=3.5e-09  Score=59.80  Aligned_cols=68  Identities=31%  Similarity=0.500  Sum_probs=50.1

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCcccc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLR   70 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~   70 (90)
                      ++|+|++|..||...........+.... .....+...+..+.+++.+|+ .+|..||+++++++|+|+.
T Consensus       198 il~el~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l-~~p~~Rp~~~~il~~~~~~  265 (265)
T cd06652         198 TVVEMLTEKPPWAEFEAMAAIFKIATQP-TNPVLPPHVSDHCRDFLKRIF-VEAKLRPSADELLRHTFVH  265 (265)
T ss_pred             HHHHHhhCCCCCCccchHHHHHHHhcCC-CCCCCchhhCHHHHHHHHHHh-cChhhCCCHHHHhcCcccC
Confidence            3689999999998765444444433221 122234567888999999998 4899999999999999973

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>KOG4279|consensus

Probab=98.87  E-value=5.1e-09  Score=66.41  Aligned_cols=70  Identities=33%  Similarity=0.552  Sum_probs=55.1

Q ss_pred             EEeeecCCCCCCCC-CHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCcccccc
Q psy10832          2 VVEMVDGEPPFFNE-PPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQA   72 (90)
Q Consensus         2 l~~~~~g~~p~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~   72 (90)
                      +.||.+|++||... ++...+.++-... ..++.|..++.+++.||.+|+..+|.+|+++.+++..||++..
T Consensus       768 ~vEMATGrPPF~ElgspqAAMFkVGmyK-vHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~DpFlq~~  838 (1226)
T KOG4279|consen  768 MVEMATGRPPFVELGSPQAAMFKVGMYK-VHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQDPFLQHN  838 (1226)
T ss_pred             eEeeccCCCCeeecCChhHhhhhhccee-cCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhccCcccccC
Confidence            67999999999874 4443444432221 2445567889999999999999999999999999999999866

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=98.86  E-value=2.7e-09  Score=62.23  Aligned_cols=38  Identities=39%  Similarity=0.626  Sum_probs=34.1

Q ss_pred             CCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCC
Q psy10832         37 KVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGP   74 (90)
Q Consensus        37 ~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~   74 (90)
                      ..+..+.++|.+||..+|++|+++.+++.|+||.....
T Consensus       259 ~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~~~~  296 (328)
T cd07856         259 NADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAPYHD  296 (328)
T ss_pred             CCCHHHHHHHHHHcCCChhhCCCHHHHhcCCccccccC
Confidence            46789999999999999999999999999999976543

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>KOG0986|consensus

Probab=98.86  E-value=5.9e-10  Score=67.13  Aligned_cols=73  Identities=27%  Similarity=0.429  Sum_probs=57.3

Q ss_pred             CEEeeecCCCCCCCCCHH----HHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCC-----HHHHhcCccccc
Q psy10832          1 MVVEMVDGEPPFFNEPPL----QAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRAT-----AAELLQHPFLRQ   71 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~----~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~-----~~~l~~~~~~~~   71 (90)
                      ++|||+.|+.||.....+    ++-..+...   ...++..+|++++++++.+|.+||.+|.+     +.++..||||++
T Consensus       375 llYemi~G~sPFr~~KeKvk~eEvdrr~~~~---~~ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~  451 (591)
T KOG0986|consen  375 LLYEMIAGHSPFRQRKEKVKREEVDRRTLED---PEEYSDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKD  451 (591)
T ss_pred             HHHHHHcccCchhhhhhhhhHHHHHHHHhcc---hhhcccccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCccccc
Confidence            379999999999864332    333444444   45556789999999999999999999987     468999999999


Q ss_pred             cCCCc
Q psy10832         72 AGPPA   76 (90)
Q Consensus        72 ~~~~~   76 (90)
                      .+++.
T Consensus       452 lnw~r  456 (591)
T KOG0986|consen  452 LNWRR  456 (591)
T ss_pred             CCHhH
Confidence            87654

>KOG0614|consensus

Probab=98.86  E-value=1.2e-09  Score=66.74  Aligned_cols=74  Identities=16%  Similarity=0.355  Sum_probs=63.5

Q ss_pred             EEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCC-----HHHHhcCccccccCCCc
Q psy10832          2 VVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRAT-----AAELLQHPFLRQAGPPA   76 (90)
Q Consensus         2 l~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~-----~~~l~~~~~~~~~~~~~   76 (90)
                      +||+++|.+||.+.++......|.++-- ....|..++..+.++|+++...+|..|.+     +.+|..|.||.+..+..
T Consensus       609 i~ELL~G~pPFs~~dpmktYn~ILkGid-~i~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~gfdweg  687 (732)
T KOG0614|consen  609 IYELLTGSPPFSGVDPMKTYNLILKGID-KIEFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEGFDWEG  687 (732)
T ss_pred             HHHHHcCCCCCCCCchHHHHHHHHhhhh-hhhcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhcCChhh
Confidence            5899999999999999988888887632 34556788999999999999999999986     78999999999987654

>KOG0607|consensus

Probab=98.85  E-value=6.8e-10  Score=64.60  Aligned_cols=75  Identities=28%  Similarity=0.486  Sum_probs=58.4

Q ss_pred             CEEeeecCCCCCCCCC---------------HHHHHHHhhcCCCC-CCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHh
Q psy10832          1 MVVEMVDGEPPFFNEP---------------PLQAMRRIRDMPPP-KLKNTHKVSPRLQGFLERLLVRDPLQRATAAELL   64 (90)
Q Consensus         1 il~~~~~g~~p~~~~~---------------~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~   64 (90)
                      |+|.|++|.+||.+..               ...+...|+.+... .-..|..+|.++++++..+|..++..|.++..++
T Consensus       280 IlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vl  359 (463)
T KOG0607|consen  280 ILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVL  359 (463)
T ss_pred             HHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhcc
Confidence            5799999999998642               23556777777431 1122456899999999999999999999999999


Q ss_pred             cCccccccCCC
Q psy10832         65 QHPFLRQAGPP   75 (90)
Q Consensus        65 ~~~~~~~~~~~   75 (90)
                      +|||+......
T Consensus       360 nhPw~~~~~~e  370 (463)
T KOG0607|consen  360 NHPWVQRCAPE  370 (463)
T ss_pred             CCccccccchh
Confidence            99999865533

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=98.85  E-value=9.4e-09  Score=60.03  Aligned_cols=73  Identities=19%  Similarity=0.374  Sum_probs=52.9

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCC-CC-CCCCCCCCHHHHHHHHHhhccCCCC--CCCHHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPP-PK-LKNTHKVSPRLQGFLERLLVRDPLQ--RATAAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~-~~-~~~~~~~~~~~~~~i~~~l~~~p~~--R~~~~~l~~~~~~~~~~   73 (90)
                      ++|+|++|..||.+.+.......+..... .. ......+++++++++.+|+..++..  |.++++++.|+||....
T Consensus       197 il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~f~~~~  273 (331)
T cd05624         197 CMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEGID  273 (331)
T ss_pred             hhhhhhhCCCCccCCCHHHHHHHHHcCCCcccCCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcCCCcCCCC
Confidence            57999999999998877766666654321 11 1112346899999999998765433  45799999999998643

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=98.84  E-value=4.1e-09  Score=60.25  Aligned_cols=71  Identities=27%  Similarity=0.489  Sum_probs=52.2

Q ss_pred             CEEeeecCCCCCCCCC----HHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCC-----CHHHHhcCccccc
Q psy10832          1 MVVEMVDGEPPFFNEP----PLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRA-----TAAELLQHPFLRQ   71 (90)
Q Consensus         1 il~~~~~g~~p~~~~~----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~-----~~~~l~~~~~~~~   71 (90)
                      ++|+|++|..||....    .......+....   ...+..++..+.+++.+||..+|..|+     ++.+++.|+||..
T Consensus       197 ~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~  273 (290)
T cd05613         197 LMYELLTGASPFTVDGEKNSQAEISRRILKSE---PPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQK  273 (290)
T ss_pred             HHHHHhcCCCCCCcCCccccHHHHHHHhhccC---CCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCccccc
Confidence            3688999999997532    222333333332   223456789999999999999999997     7899999999998


Q ss_pred             cCC
Q psy10832         72 AGP   74 (90)
Q Consensus        72 ~~~   74 (90)
                      ..+
T Consensus       274 ~~~  276 (290)
T cd05613         274 INW  276 (290)
T ss_pred             CCH
Confidence            764

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=98.83  E-value=5.2e-09  Score=59.80  Aligned_cols=30  Identities=30%  Similarity=0.616  Sum_probs=29.0

Q ss_pred             HHHHHHHHHhhccCCCCCCCHHHHhcCccc
Q psy10832         40 PRLQGFLERLLVRDPLQRATAAELLQHPFL   69 (90)
Q Consensus        40 ~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~   69 (90)
                      .++.+++.+||..+|.+||++.+++.|+||
T Consensus       262 ~~~~~li~~~L~~~p~~Rps~~e~l~~~~f  291 (291)
T cd07844         262 PHGEELALKFLQYEPKKRISAAEAMKHPYF  291 (291)
T ss_pred             hhHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence            788999999999999999999999999998

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=98.83  E-value=8.4e-09  Score=58.99  Aligned_cols=70  Identities=17%  Similarity=0.259  Sum_probs=53.0

Q ss_pred             EEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc------CccccccC
Q psy10832          2 VVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ------HPFLRQAG   73 (90)
Q Consensus         2 l~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~------~~~~~~~~   73 (90)
                      +|+|++ |..||.+.........+.....+  ..+...++.+.+++.+||..+|.+||++.+++.      |+||.+..
T Consensus       211 l~el~~~~~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~~~~  287 (288)
T cd05061         211 LWEITSLAEQPYQGLSNEQVLKFVMDGGYL--DQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEVS  287 (288)
T ss_pred             HHHHHhCCCCCCCCCCHHHHHHHHHcCCCC--CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCCCCC
Confidence            577887 78999887776666655544322  223456789999999999999999999888764      88888653

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=98.82  E-value=4.1e-09  Score=68.81  Aligned_cols=70  Identities=20%  Similarity=0.395  Sum_probs=52.4

Q ss_pred             CEEeeecCCCCCCCCCHHHH-HHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQA-MRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      ++|+|++|..||........ ...+... + ..+ ....+.++.+||..||..+|..||++.+++.|+|+....
T Consensus       232 ILYELLTGk~PF~~~~~~~qli~~lk~~-p-~lp-i~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~i~  302 (1021)
T PTZ00266        232 IIYELCSGKTPFHKANNFSQLISELKRG-P-DLP-IKGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKNVG  302 (1021)
T ss_pred             HHHHHHHCCCCCCcCCcHHHHHHHHhcC-C-CCC-cCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhhcC
Confidence            47899999999987654333 3333322 1 222 234689999999999999999999999999999997543

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=98.81  E-value=5.9e-09  Score=59.30  Aligned_cols=64  Identities=13%  Similarity=0.223  Sum_probs=51.1

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcC
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQH   66 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~   66 (90)
                      ++|||++ |..||.+.+..+....+.....+  ..+..++.++.+++.+||..||.+||++.++..+
T Consensus       215 il~el~~~g~~p~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~  279 (283)
T cd05048         215 VLWEIFSYGLQPYYGFSNQEVIEMIRSRQLL--PCPEDCPARVYALMIECWNEIPARRPRFKDIHTR  279 (283)
T ss_pred             HHHHHHcCCCCCCCCCCHHHHHHHHHcCCcC--CCcccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            3688887 99999988877777776655432  2345679999999999999999999999998653

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=98.81  E-value=1.1e-08  Score=57.77  Aligned_cols=67  Identities=34%  Similarity=0.546  Sum_probs=51.1

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFL   69 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~   69 (90)
                      ++|+|++|..||...........+.... .....+..+++.+.+++..|+. ++..|+++.+++.|||+
T Consensus       198 il~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~~~~  264 (264)
T cd06653         198 TVVEMLTEKPPWAEYEAMAAIFKIATQP-TKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRHPFV  264 (264)
T ss_pred             HHHHHHhCCCCCCccCHHHHHHHHHcCC-CCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcCCCC
Confidence            3688999999998876555554444322 1233456789999999999998 57999999999999985

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=98.81  E-value=7.6e-10  Score=61.76  Aligned_cols=61  Identities=26%  Similarity=0.417  Sum_probs=43.2

Q ss_pred             EEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCH-----HHHhcCccc
Q psy10832          2 VVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA-----AELLQHPFL   69 (90)
Q Consensus         2 l~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~-----~~l~~~~~~   69 (90)
                      +|+|++|..|+......     +...  .....+..++..+++++.+||..||.+|++.     +++++||||
T Consensus       172 l~el~~g~~~~~~~~~~-----~~~~--~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h~~~  237 (237)
T cd05576         172 LFELLTGKTLVECHPSG-----INTH--TTLNIPEWVSEEARSLLQQLLQFNPTERLGAGVAGVEDIKSHPFF  237 (237)
T ss_pred             HHHHHHCcchhhcCchh-----cccc--cccCCcccCCHHHHHHHHHHccCCHHHhcCCCccchHHHHcCCCC
Confidence            56777887766543211     0001  1122345678999999999999999999984     899999997

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>KOG0658|consensus

Probab=98.80  E-value=6.5e-09  Score=60.79  Aligned_cols=75  Identities=28%  Similarity=0.573  Sum_probs=57.9

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcC------------CC-------CCCC-------CCCCCCHHHHHHHHHhhccCC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDM------------PP-------PKLK-------NTHKVSPRLQGFLERLLVRDP   54 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~------------~~-------~~~~-------~~~~~~~~~~~~i~~~l~~~p   54 (90)
                      ++.||+.|++-|.|++..+++..|...            ++       +.+.       .....++++.+|+.++|.++|
T Consensus       215 V~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P  294 (364)
T KOG0658|consen  215 VMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSP  294 (364)
T ss_pred             HHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccCh
Confidence            357899999999999888877666520            00       0000       123568899999999999999


Q ss_pred             CCCCCHHHHhcCccccccCCC
Q psy10832         55 LQRATAAELLQHPFLRQAGPP   75 (90)
Q Consensus        55 ~~R~~~~~l~~~~~~~~~~~~   75 (90)
                      .+|.++.+++.|+||+..+..
T Consensus       295 ~~R~~~~~~l~h~fFdelr~~  315 (364)
T KOG0658|consen  295 SKRLSALEALAHPFFDELRDP  315 (364)
T ss_pred             hhcCCHHHHhcchhhHHhhCc
Confidence            999999999999999987654

>PHA03211 serine/threonine kinase US3; Provisional

Probab=98.80  E-value=6.5e-09  Score=63.37  Aligned_cols=35  Identities=31%  Similarity=0.446  Sum_probs=31.9

Q ss_pred             CCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccc
Q psy10832         37 KVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQ   71 (90)
Q Consensus        37 ~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~   71 (90)
                      .++.++.+||.+||..||.+|+++.+++.|+||++
T Consensus       426 ~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f~~  460 (461)
T PHA03211        426 KLDLDVEYLVCRALTFDGARRPSAAELLRLPLFQS  460 (461)
T ss_pred             cccchHHHHHHHHcccChhhCcCHHHHhhCcccCC
Confidence            34668999999999999999999999999999974

>KOG0584|consensus

Probab=98.79  E-value=3.2e-09  Score=65.61  Aligned_cols=70  Identities=29%  Similarity=0.514  Sum_probs=55.1

Q ss_pred             EEeeecCCCCCCCC-CHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832          2 VVEMVDGEPPFFNE-PPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus         2 l~~~~~g~~p~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      +.||.++.+||... +.+.+..++.++-.|.. ....-.+++++||.+||.. ...|+++.+|+.|+||...+
T Consensus       233 mLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~s-l~kV~dPevr~fIekCl~~-~~~R~sa~eLL~d~Ff~~d~  303 (632)
T KOG0584|consen  233 MLEMVTSEYPYSECTNPAQIYKKVTSGIKPAA-LSKVKDPEVREFIEKCLAT-KSERLSAKELLKDPFFDEDG  303 (632)
T ss_pred             HHHHHhccCChhhhCCHHHHHHHHHcCCCHHH-hhccCCHHHHHHHHHHhcC-chhccCHHHHhhChhhcccc
Confidence            46899999999997 55556666766643322 2233489999999999988 89999999999999999753

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=98.79  E-value=4.4e-09  Score=60.63  Aligned_cols=33  Identities=39%  Similarity=0.611  Sum_probs=30.8

Q ss_pred             CCCHHHHHHHHHhhccCCCCCCCHHHHhcCccc
Q psy10832         37 KVSPRLQGFLERLLVRDPLQRATAAELLQHPFL   69 (90)
Q Consensus        37 ~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~   69 (90)
                      ..+.++.+++.+||..||.+||++.+++.||||
T Consensus       284 ~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f  316 (316)
T cd07842         284 KPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF  316 (316)
T ss_pred             CCCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence            456789999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=98.79  E-value=1.1e-08  Score=58.26  Aligned_cols=64  Identities=14%  Similarity=0.203  Sum_probs=49.2

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcC
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQH   66 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~   66 (90)
                      ++|+|++ |..||.+.........+.....  ...+..++..+.+++.+|+..+|.+||++.+++.|
T Consensus       210 il~el~~~g~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~  274 (277)
T cd05036         210 LLWEIFSLGYMPYPGRTNQEVMEFVTGGGR--LDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILER  274 (277)
T ss_pred             HHHHHHcCCCCCCCCCCHHHHHHHHHcCCc--CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            3678886 9999998776666555544322  22345678999999999999999999999998765

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>PHA03212 serine/threonine kinase US3; Provisional

Probab=98.78  E-value=1.8e-09  Score=64.51  Aligned_cols=36  Identities=19%  Similarity=0.290  Sum_probs=32.5

Q ss_pred             CCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832         38 VSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus        38 ~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      ++.++.++|.+||..||.+|+++.+++.|+||....
T Consensus       348 ~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~~~  383 (391)
T PHA03212        348 LPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQDIP  383 (391)
T ss_pred             hhhhHHHHHHHHhcCChhhCCCHHHHhcChhhccCC
Confidence            356789999999999999999999999999998754

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=98.78  E-value=9.8e-09  Score=58.73  Aligned_cols=31  Identities=26%  Similarity=0.588  Sum_probs=29.5

Q ss_pred             CHHHHHHHHHhhccCCCCCCCHHHHhcCccc
Q psy10832         39 SPRLQGFLERLLVRDPLQRATAAELLQHPFL   69 (90)
Q Consensus        39 ~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~   69 (90)
                      +.++.+++.+|+..||.+|+++.+++.|+||
T Consensus       261 ~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~~  291 (291)
T cd07870         261 PPKAEDLASQMLMMFPKDRISAQDALLHPYF  291 (291)
T ss_pred             ChHHHHHHHHHhCcCcccCcCHHHHhcCCCC
Confidence            5688999999999999999999999999997

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=98.77  E-value=1.7e-08  Score=56.96  Aligned_cols=63  Identities=16%  Similarity=0.270  Sum_probs=49.1

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      ++|+|++ |..||.+.+.......+....  ....+...+.++.+++.+||..+|++||++.++.+
T Consensus       194 il~el~t~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~  257 (263)
T cd05052         194 LLWEIATYGMSPYPGIDLSQVYELLEKGY--RMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQ  257 (263)
T ss_pred             HHHHHHcCCCCCCCCCCHHHHHHHHHCCC--CCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence            3688987 999999877776666665442  22334567899999999999999999999988753

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>KOG0587|consensus

Probab=98.77  E-value=1.4e-08  Score=64.96  Aligned_cols=72  Identities=39%  Similarity=0.710  Sum_probs=65.3

Q ss_pred             EEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832          2 VVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus         2 l~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      ..||.-|.+|+.+.-+...+..|....+|....|..++..+.+||..||.+|...||+..+++.|||++...
T Consensus       218 aIEladG~PPl~DmHPmraLF~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi~e~~  289 (953)
T KOG0587|consen  218 AIEMAEGAPPLCDMHPMRALFLIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHPFITEQP  289 (953)
T ss_pred             eehhcCCCCCccCcchhhhhccCCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccCCcccccc
Confidence            458888999999999999999988888888888889999999999999999999999999999999999444

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=98.76  E-value=1.6e-08  Score=56.80  Aligned_cols=63  Identities=21%  Similarity=0.197  Sum_probs=49.8

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      ++|+|++ |..||...+.......+..+..+  ..+...+..+.+++.+|+..+|.+||++.+++.
T Consensus       190 ~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~  253 (256)
T cd05114         190 LMWEVFTEGKMPFEKKSNYEVVEMISRGFRL--YRPKLASMTVYEVMYSCWHEKPEGRPTFAELLR  253 (256)
T ss_pred             HHHHHHcCCCCCCCCCCHHHHHHHHHCCCCC--CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence            3678888 89999988877777777665322  223456889999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>KOG0659|consensus

Probab=98.76  E-value=1.4e-08  Score=57.65  Aligned_cols=72  Identities=21%  Similarity=0.375  Sum_probs=54.3

Q ss_pred             EEeeecCCCCCCCCCHHHHHHHhhcC-CCCCCCC------------------------CCCCCHHHHHHHHHhhccCCCC
Q psy10832          2 VVEMVDGEPPFFNEPPLQAMRRIRDM-PPPKLKN------------------------THKVSPRLQGFLERLLVRDPLQ   56 (90)
Q Consensus         2 l~~~~~g~~p~~~~~~~~~~~~i~~~-~~~~~~~------------------------~~~~~~~~~~~i~~~l~~~p~~   56 (90)
                      +.||+.|.+-|.+.+..+++..|... +.|....                        ....+.++.+++..++.+||.+
T Consensus       192 ~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~  271 (318)
T KOG0659|consen  192 FAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKK  271 (318)
T ss_pred             HHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchh
Confidence            46888899989998888777666421 1111111                        1245678899999999999999


Q ss_pred             CCCHHHHhcCccccccC
Q psy10832         57 RATAAELLQHPFLRQAG   73 (90)
Q Consensus        57 R~~~~~l~~~~~~~~~~   73 (90)
                      |+++.++++|+||++..
T Consensus       272 Rita~qaL~~~yf~~~P  288 (318)
T KOG0659|consen  272 RITASQALKHPYFKSLP  288 (318)
T ss_pred             cccHHHHhcchhhhcCC
Confidence            99999999999999754

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=98.75  E-value=1.8e-08  Score=57.19  Aligned_cols=63  Identities=14%  Similarity=0.267  Sum_probs=49.8

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      ++|+|++ |..||.+.+.......+..+....  .+..++..+.+++.+||..||.+||++.+++.
T Consensus       213 il~e~~~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~  276 (280)
T cd05049         213 VLWEIFTYGKQPWYGLSNEEVIECITQGRLLQ--RPRTCPSEVYDIMLGCWKRDPQQRINIKDIHE  276 (280)
T ss_pred             HHHHHHhcCCCCCCCCCHHHHHHHHHcCCcCC--CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            3678997 999998887777777766553222  23467899999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=98.74  E-value=2.3e-08  Score=56.34  Aligned_cols=62  Identities=15%  Similarity=0.191  Sum_probs=48.2

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHh
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELL   64 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~   64 (90)
                      ++|+|++ |..||.+.........+.....  .+....++..+.+++.+|+..+|++||+++++.
T Consensus       193 ~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~  255 (261)
T cd05072         193 LLYEIVTYGKIPYPGMSNSDVMSALQRGYR--MPRMENCPDELYDIMKTCWKEKAEERPTFDYLQ  255 (261)
T ss_pred             HHHHHHccCCCCCCCCCHHHHHHHHHcCCC--CCCCCCCCHHHHHHHHHHccCCcccCcCHHHHH
Confidence            3678887 9999998877766666654422  223346789999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=98.73  E-value=2.2e-08  Score=56.32  Aligned_cols=62  Identities=15%  Similarity=0.169  Sum_probs=48.6

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHh
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELL   64 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~   64 (90)
                      ++|+|++ |.+||...+.......+.....  ...+...+..+++++.+|+..+|.+||++.++.
T Consensus       187 ~l~~~~~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~  249 (257)
T cd05060         187 TLWEAFSYGAKPYGEMKGAEVIAMLESGER--LPRPEECPQEIYSIMLSCWKYRPEDRPTFSELE  249 (257)
T ss_pred             HHHHHHcCCCCCcccCCHHHHHHHHHcCCc--CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHH
Confidence            3678887 9999998877766666655432  233456789999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=98.73  E-value=2.1e-08  Score=56.11  Aligned_cols=64  Identities=19%  Similarity=0.282  Sum_probs=50.5

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcC
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQH   66 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~   66 (90)
                      ++|+|++ |..||.+.........+....  ....+..++.++.+++.+|+..+|++||++.+++.+
T Consensus       196 il~~l~~~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~  260 (262)
T cd00192         196 LLWEIFTLGATPYPGLSNEEVLEYLRKGY--RLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVER  260 (262)
T ss_pred             HHHHHHhcCCCCCCCCCHHHHHHHHHcCC--CCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHh
Confidence            3578888 699999887777777766543  233345678999999999999999999999998754

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=98.72  E-value=2.6e-08  Score=56.19  Aligned_cols=62  Identities=15%  Similarity=0.264  Sum_probs=48.0

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHh
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELL   64 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~   64 (90)
                      ++|+|++ |..||.+.........+....  ....+...+..+.+++..||..+|.+||+++++.
T Consensus       192 ~l~el~t~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~  254 (260)
T cd05069         192 LLTELVTKGRVPYPGMVNREVLEQVERGY--RMPCPQGCPESLHELMKLCWKKDPDERPTFEYIQ  254 (260)
T ss_pred             HHHHHHhCCCCCCCCCCHHHHHHHHHcCC--CCCCCcccCHHHHHHHHHHccCCcccCcCHHHHH
Confidence            3688988 999999877766666655442  2233456789999999999999999999988875

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=98.72  E-value=1.8e-08  Score=56.93  Aligned_cols=63  Identities=19%  Similarity=0.245  Sum_probs=49.4

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      ++|||++ |.+||.+.........+..+..  ...+..++.++.+++.+||..||.+||++.+++.
T Consensus       204 il~el~~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~  267 (273)
T cd05035         204 TMWEIATRGQTPYPGVENHEIYDYLRHGNR--LKQPEDCLDELYDLMYSCWRADPKDRPTFTKLRE  267 (273)
T ss_pred             HHHHHHhCCCCCCCCCCHHHHHHHHHcCCC--CCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            3678888 8999988777766666655532  2234567899999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=98.72  E-value=2.9e-08  Score=56.17  Aligned_cols=63  Identities=16%  Similarity=0.209  Sum_probs=48.7

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      ++|+|++ |..||.+.........+..+..  ...+..++..+.+++.+||..+|.+||++.+++.
T Consensus       203 il~el~~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~  266 (272)
T cd05075         203 TMWEIATRGQTPYPGVENSEIYDYLRQGNR--LKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRC  266 (272)
T ss_pred             HHHHHHcCCCCCCCCCCHHHHHHHHHcCCC--CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence            3678888 8999988777666666655432  2234467889999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=98.72  E-value=2.4e-08  Score=56.23  Aligned_cols=61  Identities=15%  Similarity=0.228  Sum_probs=47.4

Q ss_pred             EEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHh
Q psy10832          2 VVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELL   64 (90)
Q Consensus         2 l~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~   64 (90)
                      +|++++ |.+||.+.+.......+....  ....+...+.++.+++.+|+..+|++||+++++.
T Consensus       193 l~el~~~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~  254 (260)
T cd05067         193 LTEIVTYGRIPYPGMTNPEVIQNLERGY--RMPRPDNCPEELYELMRLCWKEKPEERPTFEYLR  254 (260)
T ss_pred             HHHHHhCCCCCCCCCChHHHHHHHHcCC--CCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHH
Confidence            578888 999999887766666554442  2233456788999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=98.71  E-value=3.2e-08  Score=55.75  Aligned_cols=63  Identities=14%  Similarity=0.181  Sum_probs=48.9

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      ++|+|++ |..||...+.......+......  ..+...+..+.+++.+||..+|.+||++.+++.
T Consensus       190 ~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~  253 (256)
T cd05113         190 LMWEVYSLGKMPYERFNNSETVEKVSQGLRL--YRPHLASEKVYAIMYSCWHEKAEERPTFQQLLS  253 (256)
T ss_pred             HHHHHhcCCCCCcCcCCHHHHHHHHhcCCCC--CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            3678887 99999887776666666554322  223456899999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=98.71  E-value=2.8e-08  Score=57.11  Aligned_cols=63  Identities=11%  Similarity=0.263  Sum_probs=49.0

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      ++|+|++ |..||.+.........+....  ....+..++..+.+++.+|+..+|.+||++.+++.
T Consensus       207 il~el~t~g~~pf~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~  270 (297)
T cd05089         207 LLWEIVSLGGTPYCGMTCAELYEKLPQGY--RMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISV  270 (297)
T ss_pred             HHHHHHcCCCCCCCCCCHHHHHHHHhcCC--CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            3678886 999999887776666655442  22334567899999999999999999999988854

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>KOG0667|consensus

Probab=98.70  E-value=3.5e-08  Score=61.12  Aligned_cols=34  Identities=41%  Similarity=0.636  Sum_probs=30.6

Q ss_pred             HHHHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832         40 PRLQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus        40 ~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      ..+.+|+.+||.+||..|++..++++|||+....
T Consensus       476 ~~F~dflk~~L~~dP~~R~tp~qal~Hpfl~~~~  509 (586)
T KOG0667|consen  476 KLFIDFLKRCLEWDPAERITPAQALNHPFLTGTS  509 (586)
T ss_pred             HHHHHHHHHHhccCchhcCCHHHHhcCccccccc
Confidence            3578999999999999999999999999999543

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=98.70  E-value=3.1e-08  Score=55.81  Aligned_cols=62  Identities=16%  Similarity=0.277  Sum_probs=48.0

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHh
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELL   64 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~   64 (90)
                      ++|+|++ |.+||.+.+.......+....  ..+.+...+..+.+++.+|+..+|.+||++.++.
T Consensus       192 ~l~~l~~~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~  254 (260)
T cd05070         192 LLTELVTKGRVPYPGMNNREVLEQVERGY--RMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQ  254 (260)
T ss_pred             HHHHHHhcCCCCCCCCCHHHHHHHHHcCC--CCCCCCcCCHHHHHHHHHHcccCcccCcCHHHHH
Confidence            3678888 899998877776666665442  2233456789999999999999999999988775

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>KOG0197|consensus

Probab=98.70  E-value=6.3e-08  Score=58.75  Aligned_cols=62  Identities=15%  Similarity=0.224  Sum_probs=53.7

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHh
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELL   64 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~   64 (90)
                      +||||++ |+.||.+.+..+.+..+..+.  ..+.|...++++.+++..||..+|++||++..+.
T Consensus       393 lL~E~fT~G~~py~~msn~ev~~~le~Gy--Rlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~  455 (468)
T KOG0197|consen  393 LLWELFTYGRVPYPGMSNEEVLELLERGY--RLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLR  455 (468)
T ss_pred             hHHHHhccCCCCCCCCCHHHHHHHHhccC--cCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHH
Confidence            4678877 999999999999999998875  4555778999999999999999999999987653

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=98.69  E-value=3.3e-08  Score=56.37  Aligned_cols=64  Identities=14%  Similarity=0.334  Sum_probs=49.2

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcC
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQH   66 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~   66 (90)
                      ++|+|++ |..||.+.........+.....  ...+..+++.+.+++..|+..+|.+||++.++.++
T Consensus       215 il~el~~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~  279 (283)
T cd05090         215 VLWEIFSFGLQPYYGFSNQEVIEMVRKRQL--LPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTR  279 (283)
T ss_pred             HHHHHHcCCCCCCCCCCHHHHHHHHHcCCc--CCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence            3678887 9999988776666555554432  23345678999999999999999999999988653

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=98.68  E-value=3.2e-08  Score=55.93  Aligned_cols=63  Identities=13%  Similarity=0.328  Sum_probs=48.0

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      ++|+|++ |..||...+.......+....  ....+...+..+.+++..||..+|.+||++.+++.
T Consensus       202 il~ellt~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~  265 (269)
T cd05044         202 LMWEILTLGQQPYPALNNQEVLQHVTAGG--RLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQE  265 (269)
T ss_pred             HHHHHHHcCCCCCcccCHHHHHHHHhcCC--ccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            3678887 999998877766655554433  22334567899999999999999999999988753

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=98.68  E-value=3.6e-08  Score=56.21  Aligned_cols=62  Identities=18%  Similarity=0.379  Sum_probs=48.1

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHh
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELL   64 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~   64 (90)
                      ++|+|++ |.+||...........+.....  ...+..+++.+.+++.+||..+|.+||++.++.
T Consensus       213 il~el~~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~  275 (280)
T cd05092         213 VLWEIFTYGKQPWYQLSNTEAIECITQGRE--LERPRTCPPEVYAIMQGCWQREPQQRMVIKDIH  275 (280)
T ss_pred             HHHHHHcCCCCCCccCCHHHHHHHHHcCcc--CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHH
Confidence            3678887 9999988777666666555432  223456789999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=98.67  E-value=4.1e-08  Score=55.27  Aligned_cols=62  Identities=15%  Similarity=0.212  Sum_probs=47.8

Q ss_pred             EEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          2 VVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         2 l~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      +|+|++ |..||...+.......+....  ....+...++.+.+++..|+..+|.+||++.++..
T Consensus       194 l~~l~~~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~  256 (261)
T cd05148         194 LYEMFTYGQVPYPGMNNHEVYDQITAGY--RMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALRE  256 (261)
T ss_pred             HHHHHcCCCCCCCcCCHHHHHHHHHhCC--cCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence            578887 899998877766666665442  22234567899999999999999999999988753

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=98.66  E-value=4.1e-08  Score=56.19  Aligned_cols=62  Identities=13%  Similarity=0.237  Sum_probs=48.8

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHh
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELL   64 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~   64 (90)
                      ++|+|++ |.+||.+.........+..+...  ..+...+.++.+++.+||..+|.+||++.++.
T Consensus       211 il~~l~t~g~~p~~~~~~~~~~~~i~~~~~~--~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~  273 (288)
T cd05093         211 VLWEIFTYGKQPWYQLSNNEVIECITQGRVL--QRPRTCPKEVYDLMLGCWQREPHMRLNIKEIH  273 (288)
T ss_pred             HHHHHHhCCCCCCCCCCHHHHHHHHHcCCcC--CCCCCCCHHHHHHHHHHccCChhhCCCHHHHH
Confidence            3678987 99999888777776776665432  22345789999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>KOG4236|consensus

Probab=98.66  E-value=2.8e-08  Score=61.48  Aligned_cols=71  Identities=20%  Similarity=0.301  Sum_probs=56.0

Q ss_pred             CEEeeecCCCCCCCC-CHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNE-PPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      |+|..++|..||... +..+++.+.....+  ...|..+++++.++|..+|+..-++|.+++..++|+|+++..
T Consensus       755 IiYVsLSGTFPFNEdEdIndQIQNAaFMyP--p~PW~eis~~AidlIn~LLqVkm~kRysvdk~lsh~Wlq~yq  826 (888)
T KOG4236|consen  755 IIYVSLSGTFPFNEDEDINDQIQNAAFMYP--PNPWSEISPEAIDLINNLLQVKMRKRYSVDKSLSHPWLQDYQ  826 (888)
T ss_pred             EEEEEecccccCCCccchhHHhhccccccC--CCchhhcCHHHHHHHHHHHHHHHHHhcchHhhccchhhhcch
Confidence            578999999999864 44455444433322  233678899999999999999999999999999999999653

>KOG0611|consensus

Probab=98.66  E-value=2.2e-08  Score=60.24  Aligned_cols=69  Identities=19%  Similarity=0.323  Sum_probs=57.9

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      +||.+..|..||++.+...++.+|..+..   .-| ....++..+|+.||..||+.|.++.++.+|=|+.-..
T Consensus       242 LLYtLVyGtMPFDG~Dhk~lvrQIs~GaY---rEP-~~PSdA~gLIRwmLmVNP~RRATieDiAsHWWvNwgy  310 (668)
T KOG0611|consen  242 LLYTLVYGTMPFDGRDHKRLVRQISRGAY---REP-ETPSDASGLIRWMLMVNPERRATIEDIASHWWVNWGY  310 (668)
T ss_pred             HHHHHhhcccccCCchHHHHHHHhhcccc---cCC-CCCchHHHHHHHHHhcCcccchhHHHHhhhheeeccc
Confidence            36888999999999999999999988843   222 2367889999999999999999999999998887443

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=98.66  E-value=6.8e-08  Score=54.80  Aligned_cols=63  Identities=17%  Similarity=0.236  Sum_probs=49.3

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      ++|++++ |..||.+.+.......+.....  ...+...+..+.+++.+||..+|.+||++.+++.
T Consensus       210 il~el~t~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~  273 (277)
T cd05032         210 VLWEMATLAEQPYQGLSNEEVLKFVIDGGH--LDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVS  273 (277)
T ss_pred             HHHHhhccCCCCCccCCHHHHHHHHhcCCC--CCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            3678887 9999998877777666654432  2334556899999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=98.66  E-value=5.5e-08  Score=55.68  Aligned_cols=61  Identities=16%  Similarity=0.298  Sum_probs=47.8

Q ss_pred             EEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHh
Q psy10832          2 VVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELL   64 (90)
Q Consensus         2 l~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~   64 (90)
                      +|+|++ |..||.+.........+....  ....+...+.++.+++..||..+|.+||++.+++
T Consensus       219 l~el~t~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~  280 (290)
T cd05045         219 LWEIVTLGGNPYPGIAPERLFNLLKTGY--RMERPENCSEEMYNLMLTCWKQEPDKRPTFADIS  280 (290)
T ss_pred             HHHHHhcCCCCCCCCCHHHHHHHHhCCC--CCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHH
Confidence            678887 999999887777666554432  2223456789999999999999999999998875

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=98.66  E-value=4.5e-08  Score=56.08  Aligned_cols=62  Identities=16%  Similarity=0.276  Sum_probs=48.1

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHh
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELL   64 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~   64 (90)
                      ++|+|++ |..||...+.......+..+..+  ..+...+..+.+++.+||..+|.+||++.+++
T Consensus       214 il~el~t~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~  276 (291)
T cd05094         214 ILWEIFTYGKQPWFQLSNTEVIECITQGRVL--ERPRVCPKEVYDIMLGCWQREPQQRLNIKEIY  276 (291)
T ss_pred             HHHHHHhCCCCCCCCCCHHHHHHHHhCCCCC--CCCccCCHHHHHHHHHHcccChhhCcCHHHHH
Confidence            3688988 99999888777666666554332  22345688999999999999999999988875

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=98.65  E-value=5.7e-08  Score=54.75  Aligned_cols=61  Identities=16%  Similarity=0.219  Sum_probs=47.7

Q ss_pred             EEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHh
Q psy10832          2 VVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELL   64 (90)
Q Consensus         2 l~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~   64 (90)
                      +|+|++ |..||.+.........+.....  ...+...+..+.+++.+|+..+|.+||++.++.
T Consensus       194 l~el~t~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~  255 (261)
T cd05068         194 LTEIVTYGRMPYPGMTNAEVLQQVDQGYR--MPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQ  255 (261)
T ss_pred             HHHHHhcCCCCCCCCCHHHHHHHHHcCCC--CCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHH
Confidence            578888 9999998877766666654422  223446789999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=98.63  E-value=6.9e-08  Score=54.34  Aligned_cols=63  Identities=13%  Similarity=0.164  Sum_probs=48.6

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      ++|+|++ |..||...........+.....  ...+...+..+.+++.+||..+|++||++.+++.
T Consensus       190 il~~l~~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~  253 (256)
T cd05059         190 LMWEVFSEGKMPYERFSNSEVVESVSAGYR--LYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLS  253 (256)
T ss_pred             HHHHHhccCCCCCCCCCHHHHHHHHHcCCc--CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence            3678888 8999988776666666654422  2234457899999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=98.63  E-value=7.9e-08  Score=54.78  Aligned_cols=63  Identities=11%  Similarity=0.152  Sum_probs=50.1

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      ++|||++ |..||.+.........+......  ..+...+..+.+++..|+..+|..||++.+++.
T Consensus       215 ~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~  278 (283)
T cd05091         215 VLWEVFSYGLQPYCGYSNQDVIEMIRNRQVL--PCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHS  278 (283)
T ss_pred             HHHHHHcCCCCCCCCCCHHHHHHHHHcCCcC--CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence            3678887 88999988777777776665432  234567899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=98.62  E-value=5.9e-08  Score=54.84  Aligned_cols=62  Identities=16%  Similarity=0.300  Sum_probs=47.8

Q ss_pred             EEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          2 VVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         2 l~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      +|+|++ |..||...........+.....  .+.+...+..+.+++..|+..+|.+||++.+++.
T Consensus       198 l~~l~~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~  260 (266)
T cd05033         198 MWEVMSYGERPYWDMSNQDVIKAVEDGYR--LPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVS  260 (266)
T ss_pred             HHHHHccCCCCCCCCCHHHHHHHHHcCCC--CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence            567776 9999988777666666655422  2224467899999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=98.62  E-value=8.6e-08  Score=54.20  Aligned_cols=63  Identities=16%  Similarity=0.327  Sum_probs=48.2

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      ++|+|++ |..||...+.......+....  ..+.+...+..+.+++.+|+..+|..||++.++++
T Consensus       199 il~ell~~g~~p~~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~  262 (268)
T cd05063         199 VMWEVMSFGERPYWDMSNHEVMKAINDGF--RLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVN  262 (268)
T ss_pred             HHHHHHhCCCCCCCcCCHHHHHHHHhcCC--CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence            3578876 999998877776666665543  22223456889999999999999999999988863

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=98.61  E-value=9.1e-08  Score=54.20  Aligned_cols=62  Identities=13%  Similarity=0.238  Sum_probs=48.0

Q ss_pred             EEeee-cCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          2 VVEMV-DGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         2 l~~~~-~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      +|+++ .|..||.+.+.......+..+..  .+.+..++..+.+++..||..+|.+||++.++.+
T Consensus       198 l~ell~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~  260 (266)
T cd05064         198 MWEVMSYGERPYWDMSGQDVIKAVEDGFR--LPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHS  260 (266)
T ss_pred             HHHHhcCCCCCcCcCCHHHHHHHHHCCCC--CCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHH
Confidence            56755 59999998877776666655432  2334567899999999999999999999988853

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=98.61  E-value=8.3e-08  Score=54.93  Aligned_cols=64  Identities=16%  Similarity=0.301  Sum_probs=48.8

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcC
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQH   66 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~   66 (90)
                      ++|+|++ |..||.+.........+.....  ...+...+.++.+++.+|+..+|.+||++.+++.+
T Consensus       223 il~el~~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~  287 (293)
T cd05053         223 LLWEIFTLGGSPYPGIPVEELFKLLKEGYR--MEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVED  287 (293)
T ss_pred             HHHHHhcCCCCCCCCCCHHHHHHHHHcCCc--CCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence            3577776 9999998877666666554432  23345678999999999999999999999988753

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=98.61  E-value=8.5e-08  Score=54.08  Aligned_cols=61  Identities=16%  Similarity=0.268  Sum_probs=46.9

Q ss_pred             EEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHh
Q psy10832          2 VVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELL   64 (90)
Q Consensus         2 l~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~   64 (90)
                      +|++++ |..||.+.+.......+....  ....+...+.++.+++.+|+..+|++||++.+++
T Consensus       193 l~~l~t~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~  254 (260)
T cd05073         193 LMEIVTYGRIPYPGMSNPEVIRALERGY--RMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQ  254 (260)
T ss_pred             HHHHHhcCCCCCCCCCHHHHHHHHhCCC--CCCCcccCCHHHHHHHHHHcccCcccCcCHHHHH
Confidence            578887 999999877766666555442  2223356789999999999999999999988775

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=98.61  E-value=7.7e-08  Score=54.74  Aligned_cols=61  Identities=18%  Similarity=0.337  Sum_probs=47.1

Q ss_pred             EEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHh
Q psy10832          2 VVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELL   64 (90)
Q Consensus         2 l~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~   64 (90)
                      +|++++ |..||...+.......+.....  ...+...++++.+++.+|+..+|+.||++.+++
T Consensus       209 l~el~~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~  270 (280)
T cd05043         209 LWELMTLGQTPYVEIDPFEMAAYLKDGYR--LAQPINCPDELFAVMACCWALDPEERPSFSQLV  270 (280)
T ss_pred             HHHHhcCCCCCcCcCCHHHHHHHHHcCCC--CCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHH
Confidence            578887 9999998777666555554432  222345688999999999999999999998876

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>KOG0589|consensus

Probab=98.61  E-value=7.5e-08  Score=57.99  Aligned_cols=69  Identities=23%  Similarity=0.308  Sum_probs=60.0

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQ   71 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~   71 (90)
                      ++|||++-+++|.+.+...++.+|....  ..+.+..++.+++.+|+.||..+|+.||++.+++.+|.+..
T Consensus       195 ~~yEm~~lk~aF~a~~m~~Li~ki~~~~--~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~P~l~~  263 (426)
T KOG0589|consen  195 CLYEMCTLKPAFKASNMSELILKINRGL--YSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRRPHLLR  263 (426)
T ss_pred             hHHHHHhcccccCccchHHHHHHHhhcc--CCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhChhhhh
Confidence            4789999999999999999999988774  23445678999999999999999999999999999887663

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=98.61  E-value=6.9e-08  Score=54.90  Aligned_cols=63  Identities=14%  Similarity=0.192  Sum_probs=48.4

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      ++|+|++ |..||.+.........+.....+  ..+...+..+.+++.+||..+|.+||++.++++
T Consensus       210 ~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~  273 (277)
T cd05062         210 VLWEIATLAEQPYQGMSNEQVLRFVMEGGLL--DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIIS  273 (277)
T ss_pred             HHHHHHcCCCCCCCCCCHHHHHHHHHcCCcC--CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            3678888 78999888777666655554322  223457889999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=98.61  E-value=8.1e-08  Score=53.92  Aligned_cols=62  Identities=18%  Similarity=0.247  Sum_probs=47.5

Q ss_pred             EEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          2 VVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         2 l~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      +|+|++ |..||...........+..+..  ...+...+..+.+++.+||..+|.+||++.++++
T Consensus       191 l~el~~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~  253 (256)
T cd05112         191 MWEVFSEGKTPYENRSNSEVVETINAGFR--LYKPRLASQSVYELMQHCWKERPEDRPSFSLLLH  253 (256)
T ss_pred             HHHHHcCCCCCCCcCCHHHHHHHHhCCCC--CCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence            678887 9999998777666666554422  1123446899999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=98.60  E-value=8.3e-08  Score=54.29  Aligned_cols=63  Identities=17%  Similarity=0.239  Sum_probs=47.6

Q ss_pred             EEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          2 VVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         2 l~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      +|+|++|.+||...........+........ ....+++.+.+++..|+..||.+||++.++..
T Consensus       203 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~  265 (269)
T cd08528         203 LYQMCTLQPPFYSTNMLSLATKIVEAVYEPL-PEGMYSEDVTDVITSCLTPDAEARPDIIQVSA  265 (269)
T ss_pred             HHHHHhCCCcccccCHHHHHHHHhhccCCcC-CcccCCHHHHHHHHHHCCCCCccCCCHHHHHH
Confidence            6889999999988776666655554432211 12356899999999999999999999988753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>KOG0663|consensus

Probab=98.60  E-value=6.6e-08  Score=56.67  Aligned_cols=73  Identities=23%  Similarity=0.390  Sum_probs=54.6

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcC-CCCCCCC---------------------------C-CCCCHHHHHHHHHhhc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDM-PPPKLKN---------------------------T-HKVSPRLQGFLERLLV   51 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~-~~~~~~~---------------------------~-~~~~~~~~~~i~~~l~   51 (90)
                      |+.||+.+.+-|.+....+++..|... +.|....                           . ..+++.+.+++..+|.
T Consensus       267 I~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt  346 (419)
T KOG0663|consen  267 IFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLT  346 (419)
T ss_pred             HHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhc
Confidence            356889999999999888877776521 1111100                           0 1245889999999999


Q ss_pred             cCCCCCCCHHHHhcCccccccC
Q psy10832         52 RDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus        52 ~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      +||.+|.++++.++|.||....
T Consensus       347 ~dP~kR~tA~~~L~h~~F~e~P  368 (419)
T KOG0663|consen  347 YDPGKRITAEDGLKHEYFRETP  368 (419)
T ss_pred             cCccccccHHHhhcccccccCC
Confidence            9999999999999999999743

>KOG0192|consensus

Probab=98.60  E-value=9.5e-08  Score=56.80  Aligned_cols=63  Identities=24%  Similarity=0.394  Sum_probs=49.2

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHh
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELL   64 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~   64 (90)
                      ++|||++|..||.+.........+..... ....+....+....++.+||..||..||++.++.
T Consensus       235 vlWEl~t~~~Pf~~~~~~~~~~~v~~~~~-Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~  297 (362)
T KOG0192|consen  235 VLWELLTGEIPFEDLAPVQVASAVVVGGL-RPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIV  297 (362)
T ss_pred             HHHHHHHCCCCCCCCCHHHHHHHHHhcCC-CCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHH
Confidence            47899999999999887666666654332 2333445799999999999999999999987764

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=98.59  E-value=9.9e-08  Score=53.85  Aligned_cols=61  Identities=15%  Similarity=0.189  Sum_probs=48.2

Q ss_pred             EEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHh
Q psy10832          2 VVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELL   64 (90)
Q Consensus         2 l~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~   64 (90)
                      +|++++ |..||.+.........+..+..  ...+...++++.+++..||..+|.+||++.++.
T Consensus       188 l~el~~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~  249 (257)
T cd05115         188 MWEAFSYGQKPYKKMKGPEVMSFIEQGKR--LDCPAECPPEMYALMKDCWIYKWEDRPNFAKVE  249 (257)
T ss_pred             HHHHhcCCCCCcCcCCHHHHHHHHHCCCC--CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHH
Confidence            578885 9999998877777666665532  233456789999999999999999999988875

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=98.59  E-value=1.3e-07  Score=52.94  Aligned_cols=62  Identities=18%  Similarity=0.190  Sum_probs=47.5

Q ss_pred             EEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          2 VVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         2 l~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      +|++++ |..||.+.........+.....  ...+..++..+.+++.+|+..+|++||++.++.+
T Consensus       184 l~~~~~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~  246 (250)
T cd05085         184 LWETFSLGVCPYPGMTNQQAREQVEKGYR--MSCPQKCPDDVYKVMQRCWDYKPENRPKFSELQK  246 (250)
T ss_pred             HHHHhcCCCCCCCCCCHHHHHHHHHcCCC--CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence            577887 9999988776666555554422  2234467899999999999999999999988864

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=98.59  E-value=1.2e-07  Score=53.30  Aligned_cols=64  Identities=20%  Similarity=0.315  Sum_probs=48.0

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      ++|+|++ |..||...+.......+.... .....+...+..+.+++..|+..+|.+||++.++..
T Consensus       189 ~l~el~t~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~  253 (257)
T cd05040         189 TLWEMFTYGEEPWAGLSGSQILKKIDKEG-ERLERPEACPQDIYNVMLQCWAHNPADRPTFAALRE  253 (257)
T ss_pred             HHHHHHhCCCCCCCCCCHHHHHHHHHhcC-CcCCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHH
Confidence            3678887 999998877776665554322 122334456889999999999999999999988863

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=98.59  E-value=1.2e-07  Score=53.43  Aligned_cols=61  Identities=16%  Similarity=0.268  Sum_probs=47.3

Q ss_pred             EEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHh
Q psy10832          2 VVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELL   64 (90)
Q Consensus         2 l~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~   64 (90)
                      +|++++ |..||.+.........+....  ....+...+.++.+++.+|+..+|.+||++.++.
T Consensus       194 l~~l~t~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~  255 (261)
T cd05034         194 LTEIVTYGRVPYPGMTNREVLEQVERGY--RMPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQ  255 (261)
T ss_pred             HHHHHhCCCCCCCCCCHHHHHHHHHcCC--CCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHH
Confidence            578887 999998877776666665542  2222345688999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=98.58  E-value=1.1e-07  Score=53.48  Aligned_cols=62  Identities=16%  Similarity=0.265  Sum_probs=47.5

Q ss_pred             EEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          2 VVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         2 l~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      +|+|++ |..||...+.......+.....  ...+..+++.+.+++.+||..+|.+||++.+++.
T Consensus       189 l~~l~~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~  251 (256)
T cd05039         189 LWEIYSFGRVPYPRIPLKDVVPHVEKGYR--MEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLRE  251 (256)
T ss_pred             HHHHHhcCCCCCCCCCHHHHHHHHhcCCC--CCCccCCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence            567776 9999988877766666554422  2234467899999999999999999999988863

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=98.58  E-value=5.7e-08  Score=56.78  Aligned_cols=63  Identities=17%  Similarity=0.348  Sum_probs=45.1

Q ss_pred             CEEeeec-CCCCCCCCCHHH-HHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQ-AMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      ++|||++ |..||.+..... ....+..+..  ...+...++++.+++.+||..||.+||++.++++
T Consensus       265 il~el~~~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~  329 (338)
T cd05102         265 LLWEIFSLGASPYPGVQINEEFCQRLKDGTR--MRAPENATPEIYRIMLACWQGDPKERPTFSALVE  329 (338)
T ss_pred             HHHHHHhCCCCCCCCCCccHHHHHHHhcCCC--CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            3688886 999998754332 3333333322  2234567899999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=98.58  E-value=9.8e-08  Score=54.06  Aligned_cols=62  Identities=23%  Similarity=0.313  Sum_probs=47.8

Q ss_pred             EEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          2 VVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         2 l~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      +|+|++ |..||.+.........+..+..  ...+...+..+.+++.+|+..+|.+||++.+++.
T Consensus       198 l~el~~~g~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~  260 (270)
T cd05056         198 MWEILMLGVKPFQGVKNNDVIGRIENGER--LPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKA  260 (270)
T ss_pred             HHHHHHcCCCCCCCCCHHHHHHHHHcCCc--CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            567775 9999998877666666655432  2334567899999999999999999999988763

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=98.58  E-value=9.4e-08  Score=55.17  Aligned_cols=64  Identities=14%  Similarity=0.303  Sum_probs=47.9

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcC
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQH   66 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~   66 (90)
                      ++|+|++ |..||.+.+.......+....  ....+..++.++.+++.+|+..+|++||++.+++..
T Consensus       212 il~ellt~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  276 (303)
T cd05088         212 LLWEIVSLGGTPYCGMTCAELYEKLPQGY--RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS  276 (303)
T ss_pred             HHHHHHhcCCCCcccCChHHHHHHHhcCC--cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            3678887 999998876666555554332  222334578899999999999999999999988754

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=98.57  E-value=8.5e-08  Score=53.78  Aligned_cols=62  Identities=21%  Similarity=0.223  Sum_probs=46.5

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHh
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELL   64 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~   64 (90)
                      ++|+|++ |..||...........+.....  ...+...+..+.+++.+||..+|.+||++.+++
T Consensus       185 il~e~~~~~~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~  247 (252)
T cd05084         185 LLWEAFSLGAVPYANLSNQQTREAIEQGVR--LPCPELCPDAVYRLMERCWEYDPGQRPSFSTVH  247 (252)
T ss_pred             HHHHHHhCCCCCccccCHHHHHHHHHcCCC--CCCcccCCHHHHHHHHHHcCCChhhCcCHHHHH
Confidence            3678886 8899987766655555544322  223456789999999999999999999999885

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=98.57  E-value=3.1e-08  Score=56.04  Aligned_cols=62  Identities=18%  Similarity=0.346  Sum_probs=47.2

Q ss_pred             EEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          2 VVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         2 l~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      +||+++ |..||.+.+.......+..+..  ...+..++..+.+++..||..+|.+||++.++++
T Consensus       195 l~ei~~~~~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~  257 (259)
T PF07714_consen  195 LYEILTLGKFPFSDYDNEEIIEKLKQGQR--LPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQ  257 (259)
T ss_dssp             HHHHHTTSSGTTTTSCHHHHHHHHHTTEE--TTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHH
T ss_pred             ccccccccccccccccccccccccccccc--ceeccchhHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence            678998 7899999888887777755533  2234567999999999999999999999998863

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=98.57  E-value=1e-07  Score=53.36  Aligned_cols=63  Identities=16%  Similarity=0.275  Sum_probs=47.5

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      ++|+|++ |..||.+.........+....  ....+...+..+.+++.+|+..+|.+||++.+++.
T Consensus       184 i~~~l~t~~~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~  247 (251)
T cd05041         184 LLWETFSLGDTPYPGMSNQQTRERIESGY--RMPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYN  247 (251)
T ss_pred             HHHHHHhccCCCCccCCHHHHHHHHhcCC--CCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence            3578887 889998877665555554432  22234567899999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=98.57  E-value=1.1e-07  Score=53.44  Aligned_cols=62  Identities=15%  Similarity=0.203  Sum_probs=48.3

Q ss_pred             EEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          2 VVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         2 l~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      +|+|++ |..||...........+.....+  ..+...++.+.+++.+|+..+|.+||++.++..
T Consensus       189 ~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~  251 (256)
T cd05082         189 LWEIYSFGRVPYPRIPLKDVVPRVEKGYKM--DAPDGCPPVVYDVMKQCWHLDAATRPSFLQLRE  251 (256)
T ss_pred             HHHHHhCCCCCCCCCCHHHHHHHHhcCCCC--CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence            578886 99999988777766666554322  223467899999999999999999999988853

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=98.57  E-value=1e-07  Score=55.09  Aligned_cols=63  Identities=16%  Similarity=0.286  Sum_probs=48.3

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      ++|+|++ |..||.+.+.......+.....  ...+...+.++.+++.+||..+|..||++.+++.
T Consensus       231 ~l~el~~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~  294 (307)
T cd05098         231 LLWEIFTLGGSPYPGVPVEELFKLLKEGHR--MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE  294 (307)
T ss_pred             HHHHHHcCCCCCCCcCCHHHHHHHHHcCCC--CCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence            3678887 8899988777666655554432  2334567899999999999999999999988864

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=98.56  E-value=1.5e-07  Score=53.23  Aligned_cols=61  Identities=13%  Similarity=0.214  Sum_probs=46.7

Q ss_pred             EEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHh
Q psy10832          2 VVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELL   64 (90)
Q Consensus         2 l~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~   64 (90)
                      +|+|++ |..||.+.........+.....  .......+..+.+++.+|+..+|.+||++.+++
T Consensus       193 l~ellt~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~  254 (262)
T cd05071         193 LTELTTKGRVPYPGMVNREVLDQVERGYR--MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQ  254 (262)
T ss_pred             HHHHHcCCCCCCCCCChHHHHHHHhcCCC--CCCccccCHHHHHHHHHHccCCcccCCCHHHHH
Confidence            678888 8899988776666666544422  222345788999999999999999999988875

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>KOG0600|consensus

Probab=98.56  E-value=1.3e-07  Score=57.72  Aligned_cols=72  Identities=22%  Similarity=0.361  Sum_probs=55.4

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhc-CCCCCCCCC-------------------------CCCCHHHHHHHHHhhccCC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRD-MPPPKLKNT-------------------------HKVSPRLQGFLERLLVRDP   54 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~-~~~~~~~~~-------------------------~~~~~~~~~~i~~~l~~~p   54 (90)
                      |+.||+.|++.|.+.+...++..|.. .+.|...+|                         ..++..+.+++..+|..||
T Consensus       309 Il~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP  388 (560)
T KOG0600|consen  309 ILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDP  388 (560)
T ss_pred             HHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCc
Confidence            46789999999999988888777653 111111111                         2466788999999999999


Q ss_pred             CCCCCHHHHhcCcccccc
Q psy10832         55 LQRATAAELLQHPFLRQA   72 (90)
Q Consensus        55 ~~R~~~~~l~~~~~~~~~   72 (90)
                      .+|.++.+++.+.||...
T Consensus       389 ~kR~tA~~aL~seyF~t~  406 (560)
T KOG0600|consen  389 DKRGTASSALQSEYFTTE  406 (560)
T ss_pred             cccccHHHHhcCcccccC
Confidence            999999999999999643

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=98.56  E-value=1.4e-07  Score=52.81  Aligned_cols=62  Identities=19%  Similarity=0.352  Sum_probs=48.4

Q ss_pred             EEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          2 VVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         2 l~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      +|+|++ |.+||...+.......+.....  ...+...+.++.+++.+|+..+|+.||++.+++.
T Consensus       194 ~~~l~~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~  256 (258)
T smart00219      194 LWEIFTLGESPYPGMSNEEVLEYLKKGYR--LPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVE  256 (258)
T ss_pred             HHHHHhCCCCCCCCCCHHHHHHHHhcCCC--CCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHh
Confidence            567777 8899988777776666665533  2234457899999999999999999999999864

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=98.55  E-value=1.3e-07  Score=53.16  Aligned_cols=61  Identities=10%  Similarity=0.150  Sum_probs=47.2

Q ss_pred             EEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHh
Q psy10832          2 VVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELL   64 (90)
Q Consensus         2 l~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~   64 (90)
                      +|+|++ |..||...........+.....  ...+..++..+.+++..||..+|..||++.++.
T Consensus       187 l~el~~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~  248 (254)
T cd05083         187 LWEVFSYGRAPYPKMSLKEVKECVEKGYR--MEPPEGCPADVYVLMTSCWETEPKKRPSFHKLR  248 (254)
T ss_pred             HHHHHhCCCCCCccCCHHHHHHHHhCCCC--CCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHH
Confidence            578886 9999998877666666555432  222346789999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=98.55  E-value=1.8e-07  Score=53.53  Aligned_cols=61  Identities=15%  Similarity=0.220  Sum_probs=47.3

Q ss_pred             EEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHh
Q psy10832          2 VVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELL   64 (90)
Q Consensus         2 l~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~   64 (90)
                      +|+|++ |..||.+.........+..+...  ..+...+.++.+++.+||..+|.+||++.++.
T Consensus       222 l~el~~~~~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~  283 (288)
T cd05050         222 LWEIFSYGMQPYYGMAHEEVIYYVRDGNVL--SCPDNCPLELYNLMRLCWSKLPSDRPSFASIN  283 (288)
T ss_pred             HHHHHhCCCCCCCCCCHHHHHHHHhcCCCC--CCCCCCCHHHHHHHHHHcccCcccCCCHHHHH
Confidence            578886 88899887777766666555432  22346789999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>PHA03209 serine/threonine kinase US3; Provisional

Probab=98.55  E-value=7.6e-08  Score=56.86  Aligned_cols=35  Identities=23%  Similarity=0.350  Sum_probs=31.6

Q ss_pred             CCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccc
Q psy10832         37 KVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQ   71 (90)
Q Consensus        37 ~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~   71 (90)
                      .++.++.++|..||..||.+||++.++++||||+.
T Consensus       322 ~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~~  356 (357)
T PHA03209        322 NLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFAQ  356 (357)
T ss_pred             CCCchHHHHHHHHHcCCcccCcCHHHHhcCchhcc
Confidence            34667788999999999999999999999999985

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=98.54  E-value=1.4e-07  Score=54.54  Aligned_cols=64  Identities=16%  Similarity=0.315  Sum_probs=45.1

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      ++|+|++ |..||.+............... ....+...+.++.+++.+|+..+|++||++.+++.
T Consensus       232 il~el~t~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~  296 (302)
T cd05055         232 LLWEIFSLGSNPYPGMPVDSKFYKLIKEGY-RMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQ  296 (302)
T ss_pred             HHHHHHhCCCCCcCCCCchHHHHHHHHcCC-cCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence            3678887 9999987655443333332221 12223456899999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=98.53  E-value=1.4e-07  Score=53.55  Aligned_cols=63  Identities=14%  Similarity=0.308  Sum_probs=47.3

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      ++|+|++ |..||.+.+.......+....  ....+...+.++.+++.+|+..+|.+||++.+++.
T Consensus       200 il~el~~~g~~pf~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  263 (270)
T cd05047         200 LLWEIVSLGGTPYCGMTCAELYEKLPQGY--RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILV  263 (270)
T ss_pred             HHHHHHcCCCCCccccCHHHHHHHHhCCC--CCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence            3678886 999998877666665554432  22233456889999999999999999999988753

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=98.53  E-value=1.9e-07  Score=52.58  Aligned_cols=62  Identities=16%  Similarity=0.186  Sum_probs=46.4

Q ss_pred             EEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          2 VVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         2 l~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      +|+|++ |.+||...+.......+..+..+.  .+...+..+.+++..||..+|++||++.+++.
T Consensus       192 l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~  254 (262)
T cd05058         192 LWELMTRGAPPYPDVDSFDITVYLLQGRRLL--QPEYCPDPLYEVMLSCWHPKPEMRPTFSELVS  254 (262)
T ss_pred             HHHHHcCCCCCCCCCCHHHHHHHHhcCCCCC--CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            578888 577888777666666655543222  23456889999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=98.53  E-value=1.9e-07  Score=54.10  Aligned_cols=62  Identities=18%  Similarity=0.290  Sum_probs=47.9

Q ss_pred             EEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          2 VVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         2 l~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      +|+|++ |..||.+.........+.....  ...+...+.++.+++.+||..+|..||++.+++.
T Consensus       226 l~el~~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~  288 (314)
T cd05099         226 MWEIFTLGGSPYPGIPVEELFKLLREGHR--MDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVE  288 (314)
T ss_pred             HHHHHhCCCCCCCCCCHHHHHHHHHcCCC--CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence            578887 8899988877776666655432  2234567889999999999999999999888763

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>KOG4721|consensus

Probab=98.52  E-value=2.3e-08  Score=62.26  Aligned_cols=68  Identities=16%  Similarity=0.232  Sum_probs=53.2

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFL   69 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~   69 (90)
                      +||||++|..||.+.+...++--+-. +....+.|....+.++-+++.||...|.+||++.+++.|-=+
T Consensus       300 VLWEmLT~EiPYkdVdssAIIwGVGs-NsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldI  367 (904)
T KOG4721|consen  300 VLWEMLTGEIPYKDVDSSAIIWGVGS-NSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDI  367 (904)
T ss_pred             HHHHHHhcCCCccccchheeEEeccC-CcccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhh
Confidence            47899999999998766544433322 233566678889999999999999999999999999887533

>KOG1027|consensus

Probab=98.52  E-value=3e-07  Score=58.97  Aligned_cols=68  Identities=19%  Similarity=0.272  Sum_probs=46.0

Q ss_pred             EeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCcccccc
Q psy10832          3 VEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQA   72 (90)
Q Consensus         3 ~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~   72 (90)
                      |.+..|..||+.....  ..+|..++.--.........++.++|.+|+..+|..||++.+++.||+|=..
T Consensus       706 YvltgG~HpFGd~~~R--~~NIl~~~~~L~~L~~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~HPlFW~~  773 (903)
T KOG1027|consen  706 YVLTGGSHPFGDSLER--QANILTGNYTLVHLEPLPDCEAKDLISRMLNPDPQLRPSATDVLNHPLFWDS  773 (903)
T ss_pred             EEecCCccCCCchHHh--hhhhhcCccceeeeccCchHHHHHHHHHhcCCCcccCCCHHHHhCCCccCCh
Confidence            4445568999875332  2345554331111111122389999999999999999999999999988643

>PHA03210 serine/threonine kinase US3; Provisional

Probab=98.52  E-value=1.2e-07  Score=58.49  Aligned_cols=36  Identities=28%  Similarity=0.291  Sum_probs=32.2

Q ss_pred             CCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832         38 VSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus        38 ~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      ++.++.++|.+||..||.+|+++.+++.||||....
T Consensus       426 ~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f~~~~  461 (501)
T PHA03210        426 LPADFEYPLVKMLTFDWHLRPGAAELLALPLFSAEE  461 (501)
T ss_pred             CChHHHHHHHHHhccCcccCcCHHHHhhChhhhcCC
Confidence            456788889999999999999999999999998754

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=98.52  E-value=1.5e-07  Score=54.55  Aligned_cols=63  Identities=16%  Similarity=0.193  Sum_probs=46.8

Q ss_pred             EEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcC
Q psy10832          2 VVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQH   66 (90)
Q Consensus         2 l~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~   66 (90)
                      +|+|++ |..||.+.........+....  ....+...+.++.+++..||..+|.+||++.+++.+
T Consensus       201 l~el~t~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~  264 (316)
T cd05108         201 VWELMTFGSKPYDGIPASEISSILEKGE--RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIE  264 (316)
T ss_pred             HHHHHcCCCCCCCCCCHHHHHHHHhCCC--CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            678776 999999877665544443332  222344568899999999999999999999887653

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=98.52  E-value=2e-07  Score=53.08  Aligned_cols=62  Identities=15%  Similarity=0.135  Sum_probs=47.2

Q ss_pred             EEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          2 VVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         2 l~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      +|||++ |..||...........+.....+  ..+...+.++.+++..||..||..||++.+++.
T Consensus       201 l~el~t~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~  263 (279)
T cd05109         201 VWELMTFGAKPYDGIPAREIPDLLEKGERL--PQPPICTIDVYMIMVKCWMIDSECRPRFRELVD  263 (279)
T ss_pred             HHHHHcCCCCCCCCCCHHHHHHHHHCCCcC--CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            678877 99999887666555555544322  223467899999999999999999999999873

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=98.51  E-value=1.9e-07  Score=52.69  Aligned_cols=64  Identities=23%  Similarity=0.380  Sum_probs=45.0

Q ss_pred             CEEeeecCCCCCCCCC--HHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          1 MVVEMVDGEPPFFNEP--PLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         1 il~~~~~g~~p~~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      ++|+|++|..||....  .......+.....+... ....+..+.+++..||..+|++||++.++++
T Consensus       195 ~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~  260 (267)
T cd08228         195 LLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPPLP-TEHYSEKLRELVSMCIYPDPDQRPDIGYVHQ  260 (267)
T ss_pred             HHHHHhcCCCCCccccccHHHHHHHHhcCCCCCCC-hhhcCHHHHHHHHHHCCCCcccCcCHHHHHH
Confidence            3678999999997643  33444444333222221 2356789999999999999999999998874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=98.49  E-value=3.2e-07  Score=52.36  Aligned_cols=63  Identities=19%  Similarity=0.195  Sum_probs=46.6

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      ++||+++ |..||.+.........+..+..  ...+...+.+...++.+|+..+|..||++.++++
T Consensus       200 il~el~t~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~  263 (279)
T cd05111         200 TVWEMMSYGAEPYAGMRPHEVPDLLEKGER--LAQPQICTIDVYMVMVKCWMIDENVRPTFKELAN  263 (279)
T ss_pred             HHHHHHcCCCCCCCCCCHHHHHHHHHCCCc--CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence            3678887 9999988766555444544432  2223446788999999999999999999988754

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=98.49  E-value=2.8e-07  Score=52.18  Aligned_cols=63  Identities=13%  Similarity=0.164  Sum_probs=47.4

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      ++|+|++ |.+||.+.+.......+.....  ...+...+..+.+++..|+..+|..||++.+++.
T Consensus       204 il~el~~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~  267 (273)
T cd05074         204 TMWEIMTRGQTPYAGVENSEIYNYLIKGNR--LKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRD  267 (273)
T ss_pred             HHHHHhhCCCCCCCCCCHHHHHHHHHcCCc--CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            3578887 8999988776665555554432  2223456889999999999999999999988864

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>KOG0608|consensus

Probab=98.49  E-value=3e-08  Score=62.43  Aligned_cols=74  Identities=19%  Similarity=0.360  Sum_probs=54.8

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCC-CCCCCCCCCCCHHHHHHHHHhhccCCCCCCC---HHHHhcCccccccCCC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMP-PPKLKNTHKVSPRLQGFLERLLVRDPLQRAT---AAELLQHPFLRQAGPP   75 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~---~~~l~~~~~~~~~~~~   75 (90)
                      |||||+.|++||.....-....++..+. ...+.+.-+++.++.++|.++. .+++.|++   .+++..|+||++....
T Consensus       860 il~em~~g~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~ls~e~~~li~kLc-~sad~RLGkng~d~vKaHpfFkgIDfs  937 (1034)
T KOG0608|consen  860 ILYEMLVGQPPFLADTPGETQYKVINWRNFLHIPYQGNLSKEALDLIQKLC-CSADSRLGKNGADQVKAHPFFKGIDFS  937 (1034)
T ss_pred             HHHHHhhCCCCccCCCCCcceeeeeehhhccccccccccCHHHHHHHHHHh-cChhhhhcccchhhhhcCccccccchH
Confidence            5899999999999876544444444432 2345555678999999999864 67888886   5679999999986643

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=98.48  E-value=1.8e-07  Score=52.78  Aligned_cols=63  Identities=19%  Similarity=0.356  Sum_probs=43.7

Q ss_pred             CEEeeecCCCCCCCCCH--HHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHh
Q psy10832          1 MVVEMVDGEPPFFNEPP--LQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELL   64 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~   64 (90)
                      ++|+|++|..||.+...  ......+.....+.. .+..++..+.+++.+|+..+|.+||++.+++
T Consensus       195 il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~  259 (267)
T cd08229         195 LLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPL-PSDHYSEELRQLVNMCINPDPEKRPDITYVY  259 (267)
T ss_pred             HHHHHHhCCCCcccccchHHHHhhhhhcCCCCCC-CcccccHHHHHHHHHhcCCCcccCCCHHHHH
Confidence            36789999999976432  233333333322212 1245788999999999999999999998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=98.48  E-value=2.3e-07  Score=54.21  Aligned_cols=64  Identities=16%  Similarity=0.276  Sum_probs=49.4

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcC
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQH   66 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~   66 (90)
                      ++|+|++ |..||.+.+.......+.....  ...+...+..+.+++.+|+..+|.+||++.+++.+
T Consensus       225 il~el~~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~  289 (334)
T cd05100         225 LLWEIFTLGGSPYPGIPVEELFKLLKEGHR--MDKPANCTHELYMIMRECWHAVPSQRPTFKQLVED  289 (334)
T ss_pred             HHHHHHhcCCCCCCCCCHHHHHHHHHcCCC--CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence            3678887 8899998877777666655432  22344668899999999999999999999888754

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=98.47  E-value=1.5e-07  Score=55.98  Aligned_cols=63  Identities=11%  Similarity=0.220  Sum_probs=44.6

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHh
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELL   64 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~   64 (90)
                      ++|+|++ |..||...........+..... ....+...++++.+++.+||..+|.+||++.++.
T Consensus       303 il~ellt~G~~Pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~  366 (374)
T cd05106         303 LLWEIFSLGKSPYPGILVNSKFYKMVKRGY-QMSRPDFAPPEIYSIMKMCWNLEPTERPTFSQIS  366 (374)
T ss_pred             HHHHHHhCCCCCCccccccHHHHHHHHccc-CccCCCCCCHHHHHHHHHHcCCChhhCcCHHHHH
Confidence            3678886 9999987654433333333221 2222345689999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=98.47  E-value=3.8e-07  Score=51.92  Aligned_cols=61  Identities=20%  Similarity=0.228  Sum_probs=47.7

Q ss_pred             EEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHh
Q psy10832          2 VVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELL   64 (90)
Q Consensus         2 l~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~   64 (90)
                      +|++++ |..||.+.........+.....  ...+...+.++.+++..||..+|..||++.+++
T Consensus       201 l~el~~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~  262 (279)
T cd05057         201 VWELMTFGAKPYEGIPAVEIPDLLEKGER--LPQPPICTIDVYMVLVKCWMIDAESRPTFKELI  262 (279)
T ss_pred             HHHHhcCCCCCCCCCCHHHHHHHHhCCCC--CCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHH
Confidence            578887 9999998877776666655432  233445788999999999999999999988774

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>KOG0671|consensus

Probab=98.46  E-value=4.3e-07  Score=53.88  Aligned_cols=33  Identities=39%  Similarity=0.615  Sum_probs=30.0

Q ss_pred             HHHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832         41 RLQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus        41 ~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      .+.+++++||.+||.+|+++.|++.||||+...
T Consensus       381 ~LfDLl~~mL~fDP~~RiTl~EAL~HpFF~~~~  413 (415)
T KOG0671|consen  381 QLFDLLRRMLEFDPARRITLREALSHPFFARLT  413 (415)
T ss_pred             HHHHHHHHHHccCccccccHHHHhcCHHhhcCC
Confidence            467999999999999999999999999998643

>KOG0669|consensus

Probab=98.45  E-value=3.1e-07  Score=52.41  Aligned_cols=82  Identities=24%  Similarity=0.339  Sum_probs=55.8

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhc--C-CC----CCC-----------C--------------CCCCCCHHHHHHHHH
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRD--M-PP----PKL-----------K--------------NTHKVSPRLQGFLER   48 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~--~-~~----~~~-----------~--------------~~~~~~~~~~~~i~~   48 (90)
                      |+.||++|.+.+.+.....++..|..  + ..    |..           +              .+...++++.+++..
T Consensus       218 imaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~  297 (376)
T KOG0669|consen  218 IMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEK  297 (376)
T ss_pred             HHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHH
Confidence            35688999998888776666555431  0 00    000           0              011234578999999


Q ss_pred             hhccCCCCCCCHHHHhcCccccccCCC-cccHHHH
Q psy10832         49 LLVRDPLQRATAAELLQHPFLRQAGPP-ALLVPLM   82 (90)
Q Consensus        49 ~l~~~p~~R~~~~~l~~~~~~~~~~~~-~~~~~~~   82 (90)
                      +|..||.+|+.++++++|.||...... +++...+
T Consensus       298 ll~~DP~kR~~ad~alnh~~F~kdp~pqanl~~ml  332 (376)
T KOG0669|consen  298 LLKLDPTKRIDADQALNHDFFWKDPMPQANLQDML  332 (376)
T ss_pred             HhccCcccCcchHhhhchhhhhcCCcchhhHHHHH
Confidence            999999999999999999999876544 4554433

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=98.44  E-value=1.7e-07  Score=55.04  Aligned_cols=64  Identities=17%  Similarity=0.328  Sum_probs=44.8

Q ss_pred             CEEeeec-CCCCCCCCCHHH-HHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcC
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQ-AMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQH   66 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~   66 (90)
                      ++|+|++ |..||.+..... ....+.....  ...+...++++.+++..||..+|++||++.++++|
T Consensus       264 ~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~  329 (337)
T cd05054         264 LLWEIFSLGASPYPGVQIDEEFCRRLKEGTR--MRAPEYATPEIYSIMLDCWHNNPEDRPTFSELVEI  329 (337)
T ss_pred             HHHHHHHcCCCCCCCCCccHHHHHHHhccCC--CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            3678886 999998754322 2233333221  22244678999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=98.44  E-value=4.1e-07  Score=51.51  Aligned_cols=62  Identities=15%  Similarity=0.282  Sum_probs=47.1

Q ss_pred             EEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          2 VVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         2 l~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      +|||++ |..||...+.......+....  ..+.+...+..+.+++..||..+|.+||++.+++.
T Consensus       201 l~e~l~~g~~p~~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~  263 (269)
T cd05065         201 MWEVMSYGERPYWDMSNQDVINAIEQDY--RLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVS  263 (269)
T ss_pred             HHHHhcCCCCCCCCCCHHHHHHHHHcCC--cCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            577775 999998877766666664432  22234467889999999999999999999988864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=98.44  E-value=4.3e-07  Score=52.38  Aligned_cols=62  Identities=15%  Similarity=0.254  Sum_probs=48.3

Q ss_pred             EEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          2 VVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         2 l~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      +|+|++ |..||.+.+.......+.....  ...+...+..+++++.+||..+|.+||++.++++
T Consensus       229 l~el~~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~  291 (304)
T cd05101         229 MWEIFTLGGSPYPGIPVEELFKLLKEGHR--MDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVE  291 (304)
T ss_pred             HHHHHcCCCCCcccCCHHHHHHHHHcCCc--CCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence            577877 7889988877777766655432  2224467899999999999999999999988864

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>KOG0670|consensus

Probab=98.44  E-value=3.8e-07  Score=56.44  Aligned_cols=31  Identities=35%  Similarity=0.799  Sum_probs=29.0

Q ss_pred             HHHHHHHHhhccCCCCCCCHHHHhcCccccc
Q psy10832         41 RLQGFLERLLVRDPLQRATAAELLQHPFLRQ   71 (90)
Q Consensus        41 ~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~   71 (90)
                      .+++++..||..||++|.++++++.||||+.
T Consensus       721 ~~rdLLdkml~LdP~KRit~nqAL~HpFi~~  751 (752)
T KOG0670|consen  721 QLRDLLDKMLILDPEKRITVNQALKHPFITE  751 (752)
T ss_pred             HHHHHHHHHhccChhhcCCHHHHhcCCcccC
Confidence            4789999999999999999999999999974

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=98.43  E-value=3.4e-07  Score=56.62  Aligned_cols=40  Identities=13%  Similarity=0.156  Sum_probs=33.5

Q ss_pred             CCCCCCCCHHHHHHHHHhhccCC---CCCCCHHHHhcCccccc
Q psy10832         32 LKNTHKVSPRLQGFLERLLVRDP---LQRATAAELLQHPFLRQ   71 (90)
Q Consensus        32 ~~~~~~~~~~~~~~i~~~l~~~p---~~R~~~~~l~~~~~~~~   71 (90)
                      +......++.+++++.++|..++   .+|+++.++++||||..
T Consensus       463 ~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~~  505 (507)
T PLN03224        463 FSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFFLP  505 (507)
T ss_pred             cccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCcCC
Confidence            33345678999999999999866   68999999999999963

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=98.42  E-value=5e-07  Score=51.15  Aligned_cols=61  Identities=15%  Similarity=0.291  Sum_probs=46.3

Q ss_pred             EEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHh
Q psy10832          2 VVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELL   64 (90)
Q Consensus         2 l~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~   64 (90)
                      +|++++ |..||.+.........+.....  .+.+...++.+.+++.+|+..+|.+||++.+++
T Consensus       199 l~ell~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~  260 (267)
T cd05066         199 MWEVMSYGERPYWEMSNQDVIKAIEEGYR--LPAPMDCPAALHQLMLDCWQKDRNERPKFEQIV  260 (267)
T ss_pred             HHHHhcCCCCCcccCCHHHHHHHHhCCCc--CCCCCCCCHHHHHHHHHHcccCchhCCCHHHHH
Confidence            567665 9999988776666666655422  222345688999999999999999999988875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=98.42  E-value=2.9e-07  Score=54.81  Aligned_cols=64  Identities=16%  Similarity=0.295  Sum_probs=43.8

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      ++|+|++ |..||................. ....+...+.++.+++..||..||.+||++.+++.
T Consensus       305 ~l~ellt~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~  369 (375)
T cd05104         305 LLWEIFSLGSSPYPGMPVDSKFYKMIKEGY-RMLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQ  369 (375)
T ss_pred             HHHHHHhcCCCCCCCCCchHHHHHHHHhCc-cCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHH
Confidence            3678886 8899987644333333222211 11223456789999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=98.40  E-value=5.6e-07  Score=51.07  Aligned_cols=64  Identities=22%  Similarity=0.366  Sum_probs=47.4

Q ss_pred             EEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcC
Q psy10832          2 VVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQH   66 (90)
Q Consensus         2 l~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~   66 (90)
                      +|+|++ |..||.+.........+..... ....+..++..+.+++.+||..+|.+|+++.+++..
T Consensus       208 l~~l~~~~~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~  272 (275)
T cd05046         208 MWEVFTQGELPFYGLSDEEVLNRLQAGKL-ELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSA  272 (275)
T ss_pred             HHHHHhCCCCCccccchHHHHHHHHcCCc-CCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence            567776 7889987666666666554432 222344678999999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>KOG0695|consensus

Probab=98.40  E-value=1.1e-07  Score=56.19  Aligned_cols=73  Identities=19%  Similarity=0.301  Sum_probs=56.6

Q ss_pred             CEEeeecCCCCCCC-------CCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCC------HHHHhcCc
Q psy10832          1 MVVEMVDGEPPFFN-------EPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRAT------AAELLQHP   67 (90)
Q Consensus         1 il~~~~~g~~p~~~-------~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~------~~~l~~~~   67 (90)
                      ++|||+.|+.||+-       .+.++.+..+.-..  ....|..++..+..+++..|.+||..|..      +.++..|+
T Consensus       440 lmfemmagrspfdivgm~n~d~ntedylfqvilek--qiriprslsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h~  517 (593)
T KOG0695|consen  440 LMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEK--QIRIPRSLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHA  517 (593)
T ss_pred             HHHHHHcCCCCcceecCCCcccchhHHHHHHHhhh--cccccceeehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcch
Confidence            36899999999972       35566666654332  34556788999999999999999999986      57899999


Q ss_pred             cccccCCC
Q psy10832         68 FLRQAGPP   75 (90)
Q Consensus        68 ~~~~~~~~   75 (90)
                      ||....+.
T Consensus       518 ffr~idwd  525 (593)
T KOG0695|consen  518 FFRSIDWD  525 (593)
T ss_pred             hhhhCCHH
Confidence            99976644

>KOG0594|consensus

Probab=98.39  E-value=6.2e-07  Score=52.33  Aligned_cols=76  Identities=26%  Similarity=0.448  Sum_probs=56.2

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhc-CCCCCCCC-------------------C-------CCCCHHHHHHHHHhhccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRD-MPPPKLKN-------------------T-------HKVSPRLQGFLERLLVRD   53 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~-~~~~~~~~-------------------~-------~~~~~~~~~~i~~~l~~~   53 (90)
                      |++||+++++-|.+.+..+++..|-. .+.|....                   +       ...++++.+++..||..+
T Consensus       210 IfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~  289 (323)
T KOG0594|consen  210 IFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYD  289 (323)
T ss_pred             HHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccC
Confidence            35689999999999988887777642 00111000                   0       123358999999999999


Q ss_pred             CCCCCCHHHHhcCccccccCCCc
Q psy10832         54 PLQRATAAELLQHPFLRQAGPPA   76 (90)
Q Consensus        54 p~~R~~~~~l~~~~~~~~~~~~~   76 (90)
                      |.+|.++..++.|+||.......
T Consensus       290 p~~R~Sa~~al~h~yf~~~~~~~  312 (323)
T KOG0594|consen  290 PAKRISAKGALTHPYFSELPEKS  312 (323)
T ss_pred             cccCcCHHHHhcChhhcccccch
Confidence            99999999999999999876544

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=98.39  E-value=5.8e-07  Score=51.50  Aligned_cols=63  Identities=16%  Similarity=0.174  Sum_probs=44.0

Q ss_pred             EEeeec--CCCCCCCCCHHHHHHHhhcC-----CCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHh
Q psy10832          2 VVEMVD--GEPPFFNEPPLQAMRRIRDM-----PPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELL   64 (90)
Q Consensus         2 l~~~~~--g~~p~~~~~~~~~~~~i~~~-----~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~   64 (90)
                      +|+|++  |..||........+..+...     .......+...+.++.+++.+||..+|.+||++.++.
T Consensus       222 l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~  291 (296)
T cd05051         222 LWEILTLCREQPYEHLTDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIH  291 (296)
T ss_pred             HHHHHhcCCCCCCCCcChHHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHH
Confidence            567766  77888876655555444322     1112223345678999999999999999999999885

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=98.38  E-value=5.8e-07  Score=50.68  Aligned_cols=63  Identities=22%  Similarity=0.409  Sum_probs=43.9

Q ss_pred             CEEeeecCCCCCCCC--CHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHh
Q psy10832          1 MVVEMVDGEPPFFNE--PPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELL   64 (90)
Q Consensus         1 il~~~~~g~~p~~~~--~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~   64 (90)
                      ++|+|++|..||...  +.......+..+..+..+ ...++..+.+++..|+..+|+.||++.+++
T Consensus       195 il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il  259 (267)
T cd08224         195 LLYEMAALQSPFYGDKMNLYSLCKKIEKCDYPPLP-ADHYSEELRDLVSRCINPDPEKRPDISYVL  259 (267)
T ss_pred             HHHHHHHCCCCcccCCccHHHHHhhhhcCCCCCCC-hhhcCHHHHHHHHHHcCCCcccCCCHHHHH
Confidence            357899999999654  333344444333222221 225788999999999999999999998875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>KOG1151|consensus

Probab=98.37  E-value=5.8e-07  Score=54.92  Aligned_cols=73  Identities=18%  Similarity=0.252  Sum_probs=56.0

Q ss_pred             CEEeeecCCCCCCCCCHH-HHH--HHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPL-QAM--RRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~-~~~--~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      |+|..+.|+.||...... +++  ..|.......++..+.++.++++||++||.+.-++|..+.++..||+|....
T Consensus       673 IFyQClYGrKPFGhnqsQQdILqeNTIlkAtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~dpyllPh~  748 (775)
T KOG1151|consen  673 IFYQCLYGRKPFGHNQSQQDILQENTILKATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLACDPYLLPHI  748 (775)
T ss_pred             hhhhhhccCCCCCCchhHHHHHhhhchhcceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHccCccccchh
Confidence            578899999999976332 222  3344444344555567899999999999999999999999999999988643

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=98.37  E-value=4.3e-07  Score=51.23  Aligned_cols=61  Identities=10%  Similarity=0.176  Sum_probs=41.6

Q ss_pred             CEEeeecC-CCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          1 MVVEMVDG-EPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         1 il~~~~~g-~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      ++|+|++| ..|+........... ...   ....+...+.++.+++..||..+|.+||++.+++.
T Consensus       194 ~l~~l~~g~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  255 (258)
T cd05078         194 TLWEIFSGGDKPLSALDSQKKLQF-YED---RHQLPAPKWTELANLINQCMDYEPDFRPSFRAIIR  255 (258)
T ss_pred             HHHHHHcCCCCChhhccHHHHHHH-HHc---cccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHH
Confidence            36788888 466665544433222 222   12223445788999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>KOG2345|consensus

Probab=98.36  E-value=3.1e-08  Score=55.88  Aligned_cols=65  Identities=26%  Similarity=0.341  Sum_probs=45.8

Q ss_pred             CEEeeecCCCCCCCCCH--HHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcC
Q psy10832          1 MVVEMVDGEPPFFNEPP--LQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQH   66 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~   66 (90)
                      ++|+|+.|..||+....  ..+...+.+++. .++....+++...++|+.||+.||..||++.+++.+
T Consensus       230 tLYa~mf~~sPfe~~~~~GgSlaLAv~n~q~-s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~  296 (302)
T KOG2345|consen  230 TLYAMMFGESPFERIYQQGGSLALAVQNAQI-SIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSK  296 (302)
T ss_pred             HHHHHHHcCCcchHHhhcCCeEEEeeecccc-ccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence            37899999999985322  222233344433 222234589999999999999999999999988753

>KOG1026|consensus

Probab=98.35  E-value=1.6e-06  Score=55.56  Aligned_cols=61  Identities=15%  Similarity=0.308  Sum_probs=54.5

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHH
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAEL   63 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l   63 (90)
                      +|||+++ |.-||.+....+.+..|..++.  .+.|...+.++..++..||..+|.+||++.+|
T Consensus       694 vLWEIFsyG~QPy~glSn~EVIe~i~~g~l--L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI  755 (774)
T KOG1026|consen  694 VLWEIFSYGKQPYYGLSNQEVIECIRAGQL--LSCPENCPTEVYSLMLECWNENPKRRPSFKEI  755 (774)
T ss_pred             hhhhhhccccCcccccchHHHHHHHHcCCc--ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHH
Confidence            4788876 8999999999999999988864  56678899999999999999999999999887

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=98.33  E-value=1.2e-06  Score=49.72  Aligned_cols=62  Identities=21%  Similarity=0.259  Sum_probs=41.2

Q ss_pred             EEeeec-CCCCCCCCCHHHHHHHhhcCCC---CCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHh
Q psy10832          2 VVEMVD-GEPPFFNEPPLQAMRRIRDMPP---PKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELL   64 (90)
Q Consensus         2 l~~~~~-g~~p~~~~~~~~~~~~i~~~~~---~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~   64 (90)
                      +|+|++ |..||.................   +........+....+++..|+ .+|++||+++++.
T Consensus       199 l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~  264 (269)
T cd05087         199 IWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVH  264 (269)
T ss_pred             HHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCccCCCCChHHHHHHHHHh-cCcccCCCHHHHH
Confidence            578885 9999987655544333222211   111112346788999999998 6899999999885

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=98.30  E-value=7.9e-07  Score=53.56  Aligned_cols=62  Identities=13%  Similarity=0.211  Sum_probs=44.8

Q ss_pred             EEeeec-CCCCCCCCCHHHHHHH-hhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          2 VVEMVD-GEPPFFNEPPLQAMRR-IRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         2 l~~~~~-g~~p~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      +|||++ |..||........... +..+.  ....+..++.++.+++..||..+|.+||++.+++.
T Consensus       331 l~e~l~~g~~P~~~~~~~~~~~~~~~~~~--~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~  394 (401)
T cd05107         331 LWEIFTLGGTPYPELPMNEQFYNAIKRGY--RMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVH  394 (401)
T ss_pred             HHHHHHcCCCCCCCCCchHHHHHHHHcCC--CCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            578887 8899987554443333 33332  22334567899999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=98.30  E-value=1.5e-06  Score=50.16  Aligned_cols=62  Identities=15%  Similarity=0.145  Sum_probs=45.1

Q ss_pred             EEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          2 VVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         2 l~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      +|+|++ |..||.+.........+.....  ...+...+..+.+++..|+..+|++||++.+++.
T Consensus       201 l~el~t~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~  263 (303)
T cd05110         201 IWELMTFGGKPYDGIPTREIPDLLEKGER--LPQPPICTIDVYMVMVKCWMIDADSRPKFKELAA  263 (303)
T ss_pred             HHHHHhCCCCCCCCCCHHHHHHHHHCCCC--CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            678876 8999988765554444443322  2223456889999999999999999999888754

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>KOG0591|consensus

Probab=98.28  E-value=5.4e-07  Score=52.03  Aligned_cols=58  Identities=24%  Similarity=0.412  Sum_probs=50.2

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRAT   59 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~   59 (90)
                      ++|||+.-++||.+.+...+-.+|..+..+..+ ...+|.++..+|..|+..|++.||+
T Consensus       217 llyEMcaL~~PF~g~n~~~L~~KI~qgd~~~~p-~~~YS~~l~~li~~ci~vd~~~RP~  274 (375)
T KOG0591|consen  217 LLYEMCALQSPFYGDNLLSLCKKIEQGDYPPLP-DEHYSTDLRELINMCIAVDPEQRPD  274 (375)
T ss_pred             HHHHHHhcCCCcccccHHHHHHHHHcCCCCCCc-HHHhhhHHHHHHHHHccCCcccCCC
Confidence            368999999999999999999999998654332 2568999999999999999999997

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=98.28  E-value=1e-06  Score=55.19  Aligned_cols=35  Identities=23%  Similarity=0.315  Sum_probs=31.2

Q ss_pred             HHHHHHHHHhhccCCCCCCCHHHHhcCccccccCC
Q psy10832         40 PRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGP   74 (90)
Q Consensus        40 ~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~   74 (90)
                      ..+++||..||..||.+|+++.++++||||.....
T Consensus       424 ~~~~dLi~~mL~~dP~kR~ta~e~L~Hpff~~~~~  458 (566)
T PLN03225        424 GAGWELLKSMMRFKGRQRISAKAALAHPYFDREGL  458 (566)
T ss_pred             hHHHHHHHHHccCCcccCCCHHHHhCCcCcCCCCc
Confidence            45679999999999999999999999999987553

>KOG0665|consensus

Probab=98.27  E-value=8.7e-07  Score=51.72  Aligned_cols=32  Identities=28%  Similarity=0.638  Sum_probs=29.5

Q ss_pred             HHHHHHHHHhhccCCCCCCCHHHHhcCccccc
Q psy10832         40 PRLQGFLERLLVRDPLQRATAAELLQHPFLRQ   71 (90)
Q Consensus        40 ~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~   71 (90)
                      .-+++++.+||..||++|.++++++.|||++-
T Consensus       284 ~~ardll~~MLvi~pe~Risv~daL~HPY~~v  315 (369)
T KOG0665|consen  284 SLARDLLSKMLVIDPEKRISVDDALRHPYIKV  315 (369)
T ss_pred             HHHHHHHHHhhccChhhcccHHHHhcCCeeee
Confidence            45789999999999999999999999999983

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=98.26  E-value=1.1e-06  Score=49.72  Aligned_cols=61  Identities=16%  Similarity=0.229  Sum_probs=41.2

Q ss_pred             EEeee-cCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcC
Q psy10832          2 VVEMV-DGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQH   66 (90)
Q Consensus         2 l~~~~-~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~   66 (90)
                      +|+|+ .|..||.......... +....   .........++.+++.+||..||.+||++.+++.+
T Consensus       199 l~el~~~~~~p~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~  260 (262)
T cd05077         199 LWEICYNGEIPLKDKTLAEKER-FYEGQ---CMLVTPSCKELADLMTHCMNYDPNQRPFFRAIMRD  260 (262)
T ss_pred             HHHHHhCCCCCCCCcchhHHHH-HHhcC---ccCCCCChHHHHHHHHHHcCCChhhCcCHHHHHHh
Confidence            57776 5888887765443322 22221   11122346789999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=98.25  E-value=9e-07  Score=52.05  Aligned_cols=63  Identities=21%  Similarity=0.344  Sum_probs=43.8

Q ss_pred             EEeeec-CCCCCCCCCHH-HHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcC
Q psy10832          2 VVEMVD-GEPPFFNEPPL-QAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQH   66 (90)
Q Consensus         2 l~~~~~-g~~p~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~   66 (90)
                      +|+|++ |..||.+.... .....+..+..  ...+...++++.+++..||..+|.+||++.++++|
T Consensus       271 l~el~~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~  335 (343)
T cd05103         271 LWEIFSLGASPYPGVKIDEEFCRRLKEGTR--MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  335 (343)
T ss_pred             HHHHHHCCCCCCCCccccHHHHHHHhccCC--CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            567775 89999875432 22233333322  22234568899999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=98.24  E-value=1.9e-06  Score=49.55  Aligned_cols=63  Identities=19%  Similarity=0.147  Sum_probs=42.5

Q ss_pred             EEeeec--CCCCCCCCCHHHHHHHhhc-----CCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHh
Q psy10832          2 VVEMVD--GEPPFFNEPPLQAMRRIRD-----MPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELL   64 (90)
Q Consensus         2 l~~~~~--g~~p~~~~~~~~~~~~i~~-----~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~   64 (90)
                      +|+|++  |..||...+.......+..     ........+...++.+.+++.+|+..+|.+||++.++.
T Consensus       221 l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~  290 (295)
T cd05097         221 LWEMFTLCKEQPYSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIH  290 (295)
T ss_pred             HHHHHHcCCCCCCcccChHHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHH
Confidence            567765  6678887665544433321     11111222345689999999999999999999998885

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=98.24  E-value=1.5e-06  Score=49.55  Aligned_cols=61  Identities=21%  Similarity=0.362  Sum_probs=41.7

Q ss_pred             EEee-ecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcC
Q psy10832          2 VVEM-VDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQH   66 (90)
Q Consensus         2 l~~~-~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~   66 (90)
                      +|+| +.|..||.+.........+...    ...+.....++.+++.+||..+|.+||++.+++.+
T Consensus       211 l~el~~~g~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~  272 (274)
T cd05076         211 LLEICFDGEVPLKERTPSEKERFYEKK----HRLPEPSCKELATLISQCLTYEPTQRPSFRTILRD  272 (274)
T ss_pred             HHHHHhCCCCCccccChHHHHHHHHhc----cCCCCCCChHHHHHHHHHcccChhhCcCHHHHHHh
Confidence            5676 4688999876544332222211    11223346789999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=98.24  E-value=1.9e-06  Score=49.51  Aligned_cols=63  Identities=14%  Similarity=0.149  Sum_probs=42.4

Q ss_pred             EEeeec--CCCCCCCCCHHHHHHHhhc-----CCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHh
Q psy10832          2 VVEMVD--GEPPFFNEPPLQAMRRIRD-----MPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELL   64 (90)
Q Consensus         2 l~~~~~--g~~p~~~~~~~~~~~~i~~-----~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~   64 (90)
                      +|||++  |..||...+..........     ......+.+...+..+.+++..||..||.+||++.++.
T Consensus       222 l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~  291 (296)
T cd05095         222 LWEILTLCKEQPYSQLSDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIH  291 (296)
T ss_pred             HHHHHHhCCCCCccccChHHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHH
Confidence            577876  7788877655444332211     11111222345678999999999999999999998875

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>KOG0199|consensus

Probab=98.23  E-value=2.7e-06  Score=54.46  Aligned_cols=63  Identities=19%  Similarity=0.330  Sum_probs=52.9

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      ++|||++ |+-||.+.....++.+|-.+.  ....+...++++.+++..||..+|.+|+++..|..
T Consensus       304 TiWEMFtyGEePW~G~~g~qIL~~iD~~e--rLpRPk~csedIY~imk~cWah~paDRptFsair~  367 (1039)
T KOG0199|consen  304 TIWEMFTYGEEPWVGCRGIQILKNIDAGE--RLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIRE  367 (1039)
T ss_pred             hHHhhhccCCCCCCCCCHHHHHHhccccc--cCCCCCCChHHHHHHHHHhccCCccccccHHHHHH
Confidence            3689977 889999999999998887443  44556678999999999999999999999887753

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=98.21  E-value=6.1e-06  Score=46.93  Aligned_cols=62  Identities=13%  Similarity=0.221  Sum_probs=42.2

Q ss_pred             CEEeeecCCCCCCCCCHHH---------------HHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHh
Q psy10832          1 MVVEMVDGEPPFFNEPPLQ---------------AMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELL   64 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~---------------~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~   64 (90)
                      ++|+|++|..|+.......               ....+....  ....+...+.++.+++..|+..+|..||++.+++
T Consensus       201 ~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~  277 (284)
T cd05038         201 TLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGE--RLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLI  277 (284)
T ss_pred             hhheeeccCCCcccccchhccccccccccccHHHHHHHHHcCC--cCCCCccCCHHHHHHHHHHhccChhhCCCHHHHH
Confidence            4789999999887542211               112222221  2222345678999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=98.21  E-value=3.3e-06  Score=47.85  Aligned_cols=64  Identities=22%  Similarity=0.276  Sum_probs=44.2

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCC---CCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPP---PKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~---~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      ++|+|++ |..||...........+.....   +....+..++....+++..|+ .||.+||++++++.
T Consensus       198 ~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~  265 (269)
T cd05042         198 TMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHE  265 (269)
T ss_pred             HHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCcccccCCHHHHHHHHHHh-cCcccccCHHHHHH
Confidence            3678888 7889988766555444433222   122223467888999999998 59999999988753

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>KOG1095|consensus

Probab=98.19  E-value=2.4e-06  Score=56.37  Aligned_cols=62  Identities=13%  Similarity=0.288  Sum_probs=52.4

Q ss_pred             EEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          2 VVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         2 l~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      +||+++ |..||.+.+..+.+.....+.  ....|...++...+++..||..+|++||++..|+.
T Consensus       894 lWEifslG~~PY~~~~n~~v~~~~~~gg--RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~  956 (1025)
T KOG1095|consen  894 LWEIFSLGATPYPSRSNFEVLLDVLEGG--RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVE  956 (1025)
T ss_pred             HHHHHhCCCCCCCCcchHHHHHHHHhCC--ccCCCCCCChHHHHHHHHHccCChhhCccHHHHHh
Confidence            677877 899999998888887666665  55667788999999999999999999999888764

>PLN00181 protein SPA1-RELATED; Provisional

Probab=98.19  E-value=8.4e-07  Score=57.39  Aligned_cols=68  Identities=22%  Similarity=0.266  Sum_probs=44.9

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCcccccc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQA   72 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~   72 (90)
                      ++|||++|.+|+.....  ....+.....+..  ..........++..||..+|..||++.++++|+||...
T Consensus       204 iL~ELl~~~~~~~~~~~--~~~~~~~~~~~~~--~~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h~~~~~~  271 (793)
T PLN00181        204 LLFELFCPVSSREEKSR--TMSSLRHRVLPPQ--ILLNWPKEASFCLWLLHPEPSCRPSMSELLQSEFINEP  271 (793)
T ss_pred             HHHHHhhCCCchhhHHH--HHHHHHHhhcChh--hhhcCHHHHHHHHHhCCCChhhCcChHHHhhchhhhhh
Confidence            47899998888764321  1122211111111  11124567789999999999999999999999999864

>PHA02882 putative serine/threonine kinase; Provisional

Probab=98.17  E-value=2.2e-06  Score=49.36  Aligned_cols=61  Identities=11%  Similarity=0.148  Sum_probs=42.6

Q ss_pred             CEEeeecCCCCCCCCCH-HH--------HHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          1 MVVEMVDGEPPFFNEPP-LQ--------AMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~-~~--------~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      ++|+|++|..||.+... ..        ....+...   ... ....+..+.+++..|+..+|++||+..++.+
T Consensus       222 ~l~el~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~  291 (294)
T PHA02882        222 CMLKWAGIKLPWKGFGHNGNLIHAAKCDFIKRLHEG---KIK-IKNANKFIYDFIECVTKLSYEEKPDYDALIK  291 (294)
T ss_pred             HHHHHHhCCCCCCccccchHHHHHhHHHHHHHhhhh---hhc-cCCCCHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence            36899999999987632 11        12222222   111 2345788999999999999999999988863

>KOG0193|consensus

Probab=98.15  E-value=5.2e-07  Score=56.27  Aligned_cols=65  Identities=18%  Similarity=0.180  Sum_probs=48.0

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCC-CCCC-CCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPP-PKLK-NTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~-~~~~-~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      ++|||++|..||...+...++..+-.+.. +... .......++++++..||.++++.||.+.+|+.
T Consensus       582 V~YELltg~lPysi~~~dqIifmVGrG~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~  648 (678)
T KOG0193|consen  582 VWYELLTGELPYSIQNRDQIIFMVGRGYLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLS  648 (678)
T ss_pred             HHHHHHhCcCCcCCCChhheEEEecccccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHH
Confidence            47999999999997777666655555421 2221 12334568999999999999999999888764

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=98.14  E-value=2.5e-06  Score=51.44  Aligned_cols=62  Identities=11%  Similarity=0.207  Sum_probs=43.2

Q ss_pred             CEEeeec-CCCCCCCCCHHH-HHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHh
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQ-AMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELL   64 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~   64 (90)
                      ++|+|++ |..||....... ....+..+.  ....+..++.++.+++..||..+|.+||++.++.
T Consensus       328 il~ellt~g~~P~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~  391 (400)
T cd05105         328 LLWEIFSLGGTPYPGMIVDSTFYNKIKSGY--RMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLS  391 (400)
T ss_pred             HHHHHHHCCCCCCcccchhHHHHHHHhcCC--CCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHH
Confidence            3578876 889998754333 223333332  2223456789999999999999999999987764

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>KOG0595|consensus

Probab=98.12  E-value=1.9e-06  Score=51.56  Aligned_cols=73  Identities=26%  Similarity=0.427  Sum_probs=60.5

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      |+|+|++|.+||...+..++...+..+.......+...+....+++...+..++..|.+..+...|+++....
T Consensus       203 Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~~~l~~~p  275 (429)
T KOG0595|consen  203 ILYQCLTGKPPFDAETPKELLLYIKKGNEIVPVLPAELSNPLRELLISLLQRNPKDRISFEDFFDHPFLAANP  275 (429)
T ss_pred             HHHHHHhCCCCccccCHHHHHHHHhccccccCchhhhccCchhhhhhHHHhcCccccCchHHhhhhhhcccCc
Confidence            5799999999999999999988887765544444556778888999999999999999999988888877544

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=98.10  E-value=4.7e-06  Score=47.58  Aligned_cols=31  Identities=10%  Similarity=0.103  Sum_probs=27.2

Q ss_pred             CCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832         35 THKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus        35 ~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      +...+..+.+++..|+..+|++||++++++.
T Consensus       246 ~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~  276 (283)
T cd05080         246 PKNCPQEVYILMKNCWETEAKFRPTFRSLIP  276 (283)
T ss_pred             CCCCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence            4456889999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>KOG0200|consensus

Probab=98.09  E-value=1e-05  Score=51.32  Aligned_cols=61  Identities=16%  Similarity=0.330  Sum_probs=47.6

Q ss_pred             EEeeec-CCCCCCCCC-HHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHh
Q psy10832          2 VVEMVD-GEPPFFNEP-PLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELL   64 (90)
Q Consensus         2 l~~~~~-g~~p~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~   64 (90)
                      |||+++ |..||.+.. .......+..+.  ....|...+.++.+++..||..+|+.||++.++.
T Consensus       511 L~EifsLG~~PYp~~~~~~~l~~~l~~G~--r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~  573 (609)
T KOG0200|consen  511 LWEIFTLGGTPYPGIPPTEELLEFLKEGN--RMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECV  573 (609)
T ss_pred             HHHHhhCCCCCCCCCCcHHHHHHHHhcCC--CCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHH
Confidence            678877 889999855 555666666665  3344567799999999999999999999987654

>KOG1024|consensus

Probab=98.08  E-value=6.1e-06  Score=49.80  Aligned_cols=61  Identities=16%  Similarity=0.283  Sum_probs=51.2

Q ss_pred             EEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHh
Q psy10832          2 VVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELL   64 (90)
Q Consensus         2 l~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~   64 (90)
                      +|||++ |+.|+..-++.+...-+..+.  ....|.+.++++..++.+||...|+.||+++++.
T Consensus       488 lWELmtlg~~PyaeIDPfEm~~ylkdGy--RlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv  549 (563)
T KOG1024|consen  488 LWELMTLGKLPYAEIDPFEMEHYLKDGY--RLAQPFNCPDELFTVMACCWALLPEERPSFSQLV  549 (563)
T ss_pred             HHHHHhcCCCCccccCHHHHHHHHhccc--eecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHH
Confidence            567766 899999988888777776664  4555778899999999999999999999998875

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=98.07  E-value=8.2e-06  Score=46.34  Aligned_cols=63  Identities=19%  Similarity=0.187  Sum_probs=43.4

Q ss_pred             EEeeec-CCCCCCCCCHHHHHHHhhcCCC---CCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          2 VVEMVD-GEPPFFNEPPLQAMRRIRDMPP---PKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         2 l~~~~~-g~~p~~~~~~~~~~~~i~~~~~---~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      +|+|++ |..||...........+.....   +.......+++...+++..|+ .+|.+||++.++++
T Consensus       198 l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~  264 (268)
T cd05086         198 LWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLELPYSERWYEVLQFCW-LSPEKRATAEEVHR  264 (268)
T ss_pred             HHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHH
Confidence            577875 6788987766655555433321   122223457889999999998 67999999998853

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=98.06  E-value=7e-06  Score=47.41  Aligned_cols=63  Identities=14%  Similarity=0.132  Sum_probs=41.8

Q ss_pred             EEeeec--CCCCCCCCCHHHHHHHhhc----C-CCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHh
Q psy10832          2 VVEMVD--GEPPFFNEPPLQAMRRIRD----M-PPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELL   64 (90)
Q Consensus         2 l~~~~~--g~~p~~~~~~~~~~~~i~~----~-~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~   64 (90)
                      +|+|++  +..||.+.+.......+..    . .......+...+..+.+++.+||..+|.+||++.++.
T Consensus       230 l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~  299 (304)
T cd05096         230 LWEILMLCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIH  299 (304)
T ss_pred             HHHHHHccCCCCCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHH
Confidence            567654  6678887655544433321    1 1111222345688999999999999999999999884

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>KOG0576|consensus

Probab=98.05  E-value=1.9e-05  Score=50.32  Aligned_cols=81  Identities=33%  Similarity=0.602  Sum_probs=60.4

Q ss_pred             CCCCCCCCHHHHHHHhhcC--CCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCCCcccHHHHhhhh
Q psy10832          9 EPPFFNEPPLQAMRRIRDM--PPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPPALLVPLMKGSR   86 (90)
Q Consensus         9 ~~p~~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~~~~~~~~~~~~~   86 (90)
                      ++|....-+.+.+......  +++....+..+++-+.+|++.+|.++|.+|++.+.++.|+|+...-..+...++++...
T Consensus       212 qpplfdlhpmr~l~LmTkS~~qpp~lkDk~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~~l~~rl~~eLLdK~n  291 (829)
T KOG0576|consen  212 QPPLFDLHPMRALFLMTKSGFQPPTLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQTLSRRLAIELLDKVN  291 (829)
T ss_pred             CCcccccchHHHHHHhhccCCCCCcccCCccchHHHHHHHHHHhcCCCccCCChhhheeceeeccchhhHHHHHHHHHcc
Confidence            4555555455544444433  23556666788999999999999999999999999999999998777777777777665


Q ss_pred             ccC
Q psy10832         87 HSN   89 (90)
Q Consensus        87 ~~~   89 (90)
                      ..+
T Consensus       292 ~P~  294 (829)
T KOG0576|consen  292 NPN  294 (829)
T ss_pred             CCC
Confidence            443

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=98.04  E-value=2e-05  Score=45.07  Aligned_cols=31  Identities=13%  Similarity=0.243  Sum_probs=27.7

Q ss_pred             CCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832         35 THKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus        35 ~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      +..++..+.+++..||..+|.+||++.+++.
T Consensus       248 ~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~  278 (284)
T cd05079         248 PPNCPEEVYQLMRKCWEFQPSKRTTFQNLIE  278 (284)
T ss_pred             CCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence            4567899999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>KOG0662|consensus

Probab=98.03  E-value=4.2e-05  Score=42.00  Aligned_cols=36  Identities=31%  Similarity=0.544  Sum_probs=32.0

Q ss_pred             CCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832         38 VSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus        38 ~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      .+...+++++.+|..+|..|.+++..++||||....
T Consensus       255 lns~grdllqkll~cnp~qrisaeaalqhpyf~d~s  290 (292)
T KOG0662|consen  255 LNSTGRDLLQKLLKCNPAQRISAEAALQHPYFSDFS  290 (292)
T ss_pred             hcchhHHHHHHHhccCcccccCHHHHhcCccccccC
Confidence            445689999999999999999999999999998654

>KOG0606|consensus

Probab=98.03  E-value=4.7e-06  Score=55.12  Aligned_cols=76  Identities=25%  Similarity=0.396  Sum_probs=61.6

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCC---HHHHhcCccccccCCCc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRAT---AAELLQHPFLRQAGPPA   76 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~---~~~l~~~~~~~~~~~~~   76 (90)
                      |+|+.+.|..||.++.++.++..+.....-.........+++++++..+|+.+|..|..   .-++++|.||....+..
T Consensus       247 IlyeFLVgcvpffGdtpeelfg~visd~i~wpE~dea~p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~h~ff~~LDw~~  325 (1205)
T KOG0606|consen  247 ILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEEDEALPPEAQDLIEQLLRQNPLCRLGTGGALEVKQHGFFQLLDWKS  325 (1205)
T ss_pred             HHHHHheeeeeccCCCHHHHHhhhhhhhccccccCcCCCHHHHHHHHHHHHhChHhhcccchhhhhhhccceeecccch
Confidence            47899999999999999999888776543222223457899999999999999999975   56889999999887763

>KOG4278|consensus

Probab=98.00  E-value=9.2e-06  Score=51.81  Aligned_cols=79  Identities=13%  Similarity=0.183  Sum_probs=56.4

Q ss_pred             EEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCCCcccHH
Q psy10832          2 VVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPPALLVP   80 (90)
Q Consensus         2 l~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~~~~~~~   80 (90)
                      |||+.+ |-.||.+-+.......+..+.  ....|....+...+++..||+++|.+||++.++  |.-|..+...+.+.+
T Consensus       456 LWEIATYGMsPYPGidlSqVY~LLEkgy--RM~~PeGCPpkVYeLMraCW~WsPsDRPsFaei--HqafEtmf~~sSisd  531 (1157)
T KOG4278|consen  456 LWEIATYGMSPYPGIDLSQVYGLLEKGY--RMDGPEGCPPKVYELMRACWNWSPSDRPSFAEI--HQAFETMFSSSSISD  531 (1157)
T ss_pred             HHHHHhcCCCCCCCccHHHHHHHHhccc--cccCCCCCCHHHHHHHHHHhcCCcccCccHHHH--HHHHHHHhccccccH
Confidence            455544 788999988877766665553  445567889999999999999999999998887  344444444444444


Q ss_pred             HHhh
Q psy10832         81 LMKG   84 (90)
Q Consensus        81 ~~~~   84 (90)
                      .++.
T Consensus       532 EV~k  535 (1157)
T KOG4278|consen  532 EVQK  535 (1157)
T ss_pred             HHHH
Confidence            4443

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=97.92  E-value=8.3e-06  Score=53.70  Aligned_cols=62  Identities=16%  Similarity=0.239  Sum_probs=41.7

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHH
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAE   62 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~   62 (90)
                      ++|+|++|..||................+........+++.+.+++.+|+..||.+|++..+
T Consensus       220 ILyELLTG~~PF~~~~~~ki~~~~~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~e  281 (932)
T PRK13184        220 ILYQMLTLSFPYRRKKGRKISYRDVILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQ  281 (932)
T ss_pred             HHHHHHHCCCCCCCcchhhhhhhhhccChhhccccccCCHHHHHHHHHHccCChhhCcCHHH
Confidence            46899999999987655443322111111122222457889999999999999999987443

>KOG0590|consensus

Probab=97.91  E-value=5.1e-06  Score=52.51  Aligned_cols=73  Identities=15%  Similarity=0.179  Sum_probs=50.1

Q ss_pred             CEEeeecCCCCCCCCCHHHHH-HHhhcCCC-----CCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAM-RRIRDMPP-----PKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~-~~i~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      +++.|..|+.||.-....+.. ........     ........++.+.+.++.++|+.+|.+|.++++|++.+||+...
T Consensus       514 i~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i~  592 (601)
T KOG0590|consen  514 IYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRSIE  592 (601)
T ss_pred             eEEEEecCCCccccccccccchhhhccccccccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhChHhhhcc
Confidence            467899999999865333221 11110000     01122345678899999999999999999999999999998643

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=97.89  E-value=1.7e-05  Score=44.60  Aligned_cols=60  Identities=20%  Similarity=0.345  Sum_probs=39.1

Q ss_pred             EEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          2 VVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         2 l~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      +|+|++ |..||................  ..  +......+.+++..||..+|.+||++.++++
T Consensus       196 ~~~l~~~~~~p~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~  256 (259)
T cd05037         196 LLEICSNGEEPLSTLSSSEKERFYQDQH--RL--PMPDCAELANLINQCWTYDPTKRPSFRAILR  256 (259)
T ss_pred             HHHHHhCCCCCcccCCchhHHHHHhcCC--CC--CCCCchHHHHHHHHHhccChhhCCCHHHHHH
Confidence            567777 577777654333222222221  11  1122488999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>KOG1167|consensus

Probab=97.82  E-value=2.1e-05  Score=47.29  Aligned_cols=37  Identities=32%  Similarity=0.559  Sum_probs=33.0

Q ss_pred             CCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCC
Q psy10832         38 VSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGP   74 (90)
Q Consensus        38 ~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~   74 (90)
                      ++..+.+++.+|+..||.+|.+++++++||||.....
T Consensus       353 ~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~~~~  389 (418)
T KOG1167|consen  353 FPALLLDLLDKCLELNPQKRITAEDALKHPFFDEADR  389 (418)
T ss_pred             ccHHHHHHHHHHccCChhhcccHHHHhcCcCCcchhh
Confidence            4557899999999999999999999999999996543

>KOG0196|consensus

Probab=97.82  E-value=9.3e-05  Score=48.19  Aligned_cols=62  Identities=16%  Similarity=0.304  Sum_probs=52.4

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHh
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELL   64 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~   64 (90)
                      +|||.++ |..||=+.+..+.+..|..+.  ..+.|...+..+.+++..||++|-..||.+.+|.
T Consensus       823 VmWEVmSyGERPYWdmSNQdVIkaIe~gy--RLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV  885 (996)
T KOG0196|consen  823 VMWEVMSYGERPYWDMSNQDVIKAIEQGY--RLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIV  885 (996)
T ss_pred             EEEEecccCCCcccccchHHHHHHHHhcc--CCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHH
Confidence            4777655 999999999999999998875  4444667899999999999999999999988765

>KOG1290|consensus

Probab=97.80  E-value=1.7e-05  Score=48.88  Aligned_cols=35  Identities=37%  Similarity=0.618  Sum_probs=31.3

Q ss_pred             HHHHHHHHHhhccCCCCCCCHHHHhcCccccccCC
Q psy10832         40 PRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGP   74 (90)
Q Consensus        40 ~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~   74 (90)
                      .++.+|+.-||+++|++|+++.+.++|||+.....
T Consensus       524 ~~fsdFL~PmLef~PeKR~tA~~cl~hPwLn~~~~  558 (590)
T KOG1290|consen  524 QQFSDFLSPMLEFDPEKRPTAAQCLKHPWLNPVAG  558 (590)
T ss_pred             HHHHHHHHHHHhcCccccccHHHHhcCccccCCCC
Confidence            35789999999999999999999999999996554

>KOG1989|consensus

Probab=97.75  E-value=8.6e-06  Score=52.28  Aligned_cols=60  Identities=17%  Similarity=0.227  Sum_probs=44.8

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      +||-|+....||++.-.    ..|+.++.. ++....++..+++||..||+.||..||++.+++.
T Consensus       247 lLYkLCy~t~PFe~sg~----laIlng~Y~-~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~  306 (738)
T KOG1989|consen  247 LLYKLCYFTTPFEESGK----LAILNGNYS-FPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLE  306 (738)
T ss_pred             HHHHHHHhCCCcCcCcc----eeEEecccc-CCCCccHHHHHHHHHHHHhccCcccCCCHHHHHH
Confidence            36778888899987532    235666442 2222478999999999999999999999887654

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=97.66  E-value=6.2e-05  Score=43.01  Aligned_cols=31  Identities=19%  Similarity=0.269  Sum_probs=27.3

Q ss_pred             CCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832         35 THKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus        35 ~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      +..++.++.+++.+||..+|.+||++.+++.
T Consensus       248 ~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~  278 (284)
T cd05081         248 PPGCPAEIYAIMKECWNNDPSQRPSFSELAL  278 (284)
T ss_pred             CCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            3467889999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>KOG0603|consensus

Probab=97.65  E-value=2.6e-05  Score=49.04  Aligned_cols=68  Identities=25%  Similarity=0.456  Sum_probs=54.7

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCC-----HHHHhcCccccccCCC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRAT-----AAELLQHPFLRQAGPP   75 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~-----~~~l~~~~~~~~~~~~   75 (90)
                      ++|+|++|..||.+    +....|...   .+..|..++..+++++..++..+|.+|..     ..++++|++|....+.
T Consensus       180 l~felltg~~pf~~----~~~~~Il~~---~~~~p~~l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~h~f~~~i~~~  252 (612)
T KOG0603|consen  180 LAFELLTGTLPFGG----DTMKRILKA---ELEMPRELSAEARSLFRQLFKRNPENRLGAGPDGVDEIKQHEFFQSIDWN  252 (612)
T ss_pred             hHHHHhhCCCCCch----HHHHHHhhh---ccCCchhhhHHHHHHHHHHHhhCHHHHhccCcchhHHHhccchheeeeHh
Confidence            36899999999998    455556655   44456678999999999999999999986     5789999999976644

>KOG0606|consensus

Probab=97.64  E-value=6e-05  Score=50.24  Aligned_cols=76  Identities=30%  Similarity=0.453  Sum_probs=65.4

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHH---HHhcCccccccCCCc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAA---ELLQHPFLRQAGPPA   76 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~---~l~~~~~~~~~~~~~   76 (90)
                      ++++.++|.+||..........+|.....+....+...+.++++++...+..++.+|..+.   ++..|++|+...+..
T Consensus      1024 ~l~e~l~g~pp~na~tpq~~f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~~~~e~k~~~~~~~~~~~~ 1102 (1205)
T KOG0606|consen 1024 CLFEVLTGIPPFNAETPQQIFENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAKGAAEVKGHPFFQDVDWEN 1102 (1205)
T ss_pred             hhhhhhcCCCCCCCcchhhhhhccccCCCCCCCCccccChhhhhhhhhhhccCchhccCcccccccccCCccCCCCccc
Confidence            3678999999999999999999998887666666677899999999999999999999865   889999999876544

>KOG0668|consensus

Probab=97.62  E-value=6.6e-05  Score=42.68  Aligned_cols=36  Identities=36%  Similarity=0.574  Sum_probs=33.1

Q ss_pred             CCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832         38 VSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus        38 ~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      .++++.+|+.++|..|-+.|+++.+.|.||||....
T Consensus       294 ~~peaiDlldklLrYDHqeRlTakEam~HpyF~~~~  329 (338)
T KOG0668|consen  294 VSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAPVR  329 (338)
T ss_pred             CChHHHHHHHHHHhhccccccchHHHhcCchHHHHH
Confidence            578999999999999999999999999999998643

>KOG1035|consensus

Probab=97.53  E-value=0.00011  Score=49.54  Aligned_cols=67  Identities=27%  Similarity=0.377  Sum_probs=44.7

Q ss_pred             EEeeecCCCCCCCC-CHHHHHHHhhcCCCCCC-CCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccc
Q psy10832          2 VVEMVDGEPPFFNE-PPLQAMRRIRDMPPPKL-KNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQ   71 (90)
Q Consensus         2 l~~~~~g~~p~~~~-~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~   71 (90)
                      +|||+.   ||... .....+.++..+..|.. .++...-+....+|..++..||.+||++.+++++.|+..
T Consensus       808 lFEM~y---PF~TsMERa~iL~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~s~llpp  876 (1351)
T KOG1035|consen  808 LFEMLY---PFGTSMERASILTNLRKGSIPEPADFFDPEHPEEASLIRWLLSHDPSKRPTATELLNSELLPP  876 (1351)
T ss_pred             HHHHhc---cCCchHHHHHHHHhcccCCCCCCcccccccchHHHHHHHHHhcCCCccCCCHHHHhhccCCCc
Confidence            456653   56654 33445555554433222 112223456788999999999999999999999999984

>KOG0194|consensus

Probab=97.51  E-value=0.00086  Score=41.66  Aligned_cols=63  Identities=16%  Similarity=0.259  Sum_probs=49.7

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHh
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELL   64 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~   64 (90)
                      ++||+++ |..||.+....+....|...+.+ ...+...+.+...++..|+..+|+.|++..++.
T Consensus       351 ~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~r-~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~  414 (474)
T KOG0194|consen  351 LLWEIFENGAEPYPGMKNYEVKAKIVKNGYR-MPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIK  414 (474)
T ss_pred             eEEeeeccCCCCCCCCCHHHHHHHHHhcCcc-CCCCCCCHHHHHHHHHHhccCChhhccCHHHHH
Confidence            4788888 88899999999888888554332 223446688899999999999999999977653

>KOG4257|consensus

Probab=97.50  E-value=7.1e-05  Score=47.89  Aligned_cols=60  Identities=18%  Similarity=0.281  Sum_probs=48.2

Q ss_pred             Eee-ecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHh
Q psy10832          3 VEM-VDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELL   64 (90)
Q Consensus         3 ~~~-~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~   64 (90)
                      ||+ ..|.-||.+....+.+..+.++.  ..+.|.+.++.+..++.+||.++|.+||.+.++.
T Consensus       583 WEIl~lGvkPfqgvkNsDVI~~iEnGe--RlP~P~nCPp~LYslmskcWayeP~kRPrftei~  643 (974)
T KOG4257|consen  583 WEILSLGVKPFQGVKNSDVIGHIENGE--RLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIK  643 (974)
T ss_pred             HHHHHhcCCccccccccceEEEecCCC--CCCCCCCCChHHHHHHHHHhccCcccCCcHHHHH
Confidence            444 34889999987777777777765  4455678899999999999999999999987764

>KOG0666|consensus

Probab=97.38  E-value=0.00019  Score=42.52  Aligned_cols=35  Identities=34%  Similarity=0.702  Sum_probs=31.8

Q ss_pred             CHHHHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832         39 SPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus        39 ~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      ++.+.+++.++|..||.+|.++++.++|+||....
T Consensus       310 ~~~a~~LL~klL~yDP~kRIta~qAleh~yF~~d~  344 (438)
T KOG0666|consen  310 DPSALDLLQKLLTYDPIKRITAEQALEHPYFTEDP  344 (438)
T ss_pred             CchHHHHHHHHhccCchhhccHHHHhcccccccCC
Confidence            45588999999999999999999999999999764

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=97.11  E-value=8.4e-05  Score=49.23  Aligned_cols=25  Identities=20%  Similarity=0.331  Sum_probs=22.0

Q ss_pred             HHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832         41 RLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus        41 ~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      ++.+++..|+..+|.+||++.++++
T Consensus       922 ~~~~l~~~Cl~~~P~~RPt~~evl~  946 (968)
T PLN00113        922 EVMNLALHCTATDPTARPCANDVLK  946 (968)
T ss_pred             HHHHHHHhhCcCCchhCcCHHHHHH
Confidence            5678899999999999999988864

>KOG0195|consensus

Probab=97.06  E-value=0.00046  Score=40.33  Aligned_cols=61  Identities=16%  Similarity=0.237  Sum_probs=48.2

Q ss_pred             EEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHH
Q psy10832          2 VVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAEL   63 (90)
Q Consensus         2 l~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l   63 (90)
                      +||+.+...||..-++.+..-+|.-... ....|+.++.....++.-|+.-||.+||.+..+
T Consensus       379 lwel~trevpfadlspmecgmkialegl-rv~ippgis~hm~klm~icmnedpgkrpkfdmi  439 (448)
T KOG0195|consen  379 LWELNTREVPFADLSPMECGMKIALEGL-RVHIPPGISRHMNKLMNICMNEDPGKRPKFDMI  439 (448)
T ss_pred             HHHhhccccccccCCchhhhhhhhhccc-cccCCCCccHHHHHHHHHHhcCCCCcCCCccee
Confidence            6788999999999888777666554322 344567889999999999999999999986654

>KOG1025|consensus

Probab=96.99  E-value=0.0019  Score=42.89  Aligned_cols=61  Identities=16%  Similarity=0.187  Sum_probs=49.2

Q ss_pred             EEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHh
Q psy10832          2 VVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELL   64 (90)
Q Consensus         2 l~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~   64 (90)
                      .||++| |..|+.+....++-..+..+.  ..+.|...+-++..++.+||..|+..||.++++.
T Consensus       890 iWElmTFGa~Py~gi~~~eI~dlle~ge--RLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~  951 (1177)
T KOG1025|consen  890 IWELMTFGAKPYDGIPAEEIPDLLEKGE--RLSQPPICTIDVYMVMVKCWMIDADSRPTFKELA  951 (1177)
T ss_pred             HHHHHhcCCCccCCCCHHHhhHHHhccc--cCCCCCCccHHHHHHHHHHhccCcccCccHHHHH
Confidence            356665 999999988887777766665  3555678899999999999999999999987653

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=95.77  E-value=0.015  Score=31.11  Aligned_cols=28  Identities=36%  Similarity=0.771  Sum_probs=25.1

Q ss_pred             HHHHHHHHHhhccCCCCCCCHHHHhcCc
Q psy10832         40 PRLQGFLERLLVRDPLQRATAAELLQHP   67 (90)
Q Consensus        40 ~~~~~~i~~~l~~~p~~R~~~~~l~~~~   67 (90)
                      ....+++..|+..+|..|++..++++++
T Consensus       188 ~~~~~~l~~~l~~~p~~R~~~~~l~~~~  215 (215)
T cd00180         188 PELKDLIRKMLQKDPEKRPSAKEILEHL  215 (215)
T ss_pred             HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence            6788999999999999999999998763

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=94.44  E-value=0.0024  Score=37.36  Aligned_cols=49  Identities=20%  Similarity=0.285  Sum_probs=30.1

Q ss_pred             EEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCC
Q psy10832          2 VVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQR   57 (90)
Q Consensus         2 l~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R   57 (90)
                      +|.+++|..||+..........       .+.....+++..+.+|.++|+.||.+|
T Consensus       240 ly~lWC~~lPf~~~~~~~~~~~-------~f~~C~~~Pe~v~~LI~~lL~~~~~~R  288 (288)
T PF14531_consen  240 LYSLWCGRLPFGLSSPEADPEW-------DFSRCRDMPEPVQFLIRGLLQRNPEDR  288 (288)
T ss_dssp             HHHHHHSS-STCCCGGGSTSGG-------GGTTSS---HHHHHHHHHHT-SSGGGS
T ss_pred             HHHHHHccCCCCCCCccccccc-------cchhcCCcCHHHHHHHHHHccCCcccC
Confidence            5788999999986533211110       222233789999999999999999887

>KOG1094|consensus

Probab=94.42  E-value=0.094  Score=34.18  Aligned_cols=58  Identities=17%  Similarity=0.157  Sum_probs=42.3

Q ss_pred             ecCCCCCCCCCHHHHHHHhhc---CCC--CCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHH
Q psy10832          6 VDGEPPFFNEPPLQAMRRIRD---MPP--PKLKNTHKVSPRLQGFLERLLVRDPLQRATAAEL   63 (90)
Q Consensus         6 ~~g~~p~~~~~~~~~~~~i~~---~~~--~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l   63 (90)
                      ++...||........+.+...   .+.  .-...|..+..++.+++.+||..+...||+++++
T Consensus       735 ~C~e~Py~~lt~e~vven~~~~~~~~~~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~l  797 (807)
T KOG1094|consen  735 LCREQPYSQLTDEQVVENAGEFFRDQGRQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQL  797 (807)
T ss_pred             HHhhCchhhhhHHHHHHhhhhhcCCCCcceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHH
Confidence            446788888776666655432   211  1233456678899999999999999999999987

>KOG4158|consensus

Probab=94.23  E-value=0.041  Score=34.26  Aligned_cols=57  Identities=21%  Similarity=0.384  Sum_probs=38.7

Q ss_pred             CEEeeecCCCCCCCCCHHHHHH-HhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMR-RIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRAT   59 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~   59 (90)
                      +.||++....||-+.-...+.. ...+.+.|  ..+..+.+.+++++..+|..||.+|++
T Consensus       446 laYEIfg~~NPFY~rGem~L~~r~Yqe~qLP--alp~~vpp~~rqlV~~lL~r~pskRvs  503 (598)
T KOG4158|consen  446 LAYEIFGRSNPFYKRGEMLLDTRTYQESQLP--ALPSRVPPVARQLVFDLLKRDPSKRVS  503 (598)
T ss_pred             hHHHHhccCCcccccchheechhhhhhhhCC--CCcccCChHHHHHHHHHhcCCccccCC
Confidence            3588888889987632221111 12223222  235678999999999999999999998

>KOG1345|consensus

Probab=93.95  E-value=0.27  Score=29.29  Aligned_cols=71  Identities=11%  Similarity=0.121  Sum_probs=43.1

Q ss_pred             CEEeeecCCCCCCCCC--HHHHHHHhh--cCCCCC-CCCCCCCCHHHHHHHHHhhccCCCCCCC---HHHHhcCccccc
Q psy10832          1 MVVEMVDGEPPFFNEP--PLQAMRRIR--DMPPPK-LKNTHKVSPRLQGFLERLLVRDPLQRAT---AAELLQHPFLRQ   71 (90)
Q Consensus         1 il~~~~~g~~p~~~~~--~~~~~~~i~--~~~~~~-~~~~~~~~~~~~~~i~~~l~~~p~~R~~---~~~l~~~~~~~~   71 (90)
                      ++|..++|.+||....  ......-..  ....+. +.....+++.+..+.++.|..++.+|..   ....+...|...
T Consensus       214 i~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~~~P~~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~w~E~  292 (378)
T KOG1345|consen  214 IFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNPALPKKFNPFSEKALRLFKKSLTPRFKDRCKIWTAKKMRKCLWKEK  292 (378)
T ss_pred             eeeeeecCCCcchhhhccCchHHHHHHHhcccCccCchhhcccCHHHHHHHHHhcCCcccccchhHHHHHHHHHHHHHh
Confidence            4788999999998532  222222222  111111 1222457899999999999999999954   334445555443

>KOG1023|consensus

Probab=93.77  E-value=0.084  Score=33.35  Aligned_cols=64  Identities=16%  Similarity=0.222  Sum_probs=42.1

Q ss_pred             CEEeeecCCCCCCCC----CHHHHHHHhhc-CCC-CCCCCC--CCCCHHHHHHHHHhhccCCCCCCCHHHHh
Q psy10832          1 MVVEMVDGEPPFFNE----PPLQAMRRIRD-MPP-PKLKNT--HKVSPRLQGFLERLLVRDPLQRATAAELL   64 (90)
Q Consensus         1 il~~~~~g~~p~~~~----~~~~~~~~i~~-~~~-~~~~~~--~~~~~~~~~~i~~~l~~~p~~R~~~~~l~   64 (90)
                      ++||++....||...    ...+.+..+.. +.. ..+..+  ....++...++..||..+|..||++.++.
T Consensus       147 i~~ei~~r~~~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~  218 (484)
T KOG1023|consen  147 IMYEILFRSGPFDLRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIR  218 (484)
T ss_pred             HHHHHHhccCccccccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHH
Confidence            357888888898862    33445555555 221 111111  13455789999999999999999988764

>KOG0664|consensus

Probab=93.52  E-value=0.066  Score=31.76  Aligned_cols=35  Identities=31%  Similarity=0.487  Sum_probs=29.3

Q ss_pred             CHHHHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832         39 SPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus        39 ~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      ..+...++..++..||++|.+..+.+.|++....+
T Consensus       316 ~heav~~~~~~l~~d~dkris~~~A~~~~~~~e~R  350 (449)
T KOG0664|consen  316 NHEAVDLLQKLLHFDPDKRISVEEALQHRYLEEGR  350 (449)
T ss_pred             chHHHHHHHHHhCCCCcccccHhhhcccccccccc
Confidence            34678888899999999999999999998877554

>KOG0590|consensus

Probab=92.28  E-value=0.058  Score=34.90  Aligned_cols=70  Identities=17%  Similarity=0.207  Sum_probs=49.9

Q ss_pred             EEeeecCCCCCCCCCHHHHH--HHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccc
Q psy10832          2 VVEMVDGEPPFFNEPPLQAM--RRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQ   71 (90)
Q Consensus         2 l~~~~~g~~p~~~~~~~~~~--~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~   71 (90)
                      +..+++|..|+.........  ..+..........+..++....+++.+++..++..|.+.+++..++|+..
T Consensus       220 l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~~~  291 (601)
T KOG0590|consen  220 LSAMLTGELPWDFPSRKDGRYSSWKSNKGRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKLDNWLSS  291 (601)
T ss_pred             ccccccCCCCccccccccccceeecccccccccCccccCChhhhhcccccccCCchhccccccccccccccc
Confidence            45677888888765433321  11111111234456778899999999999999999999999999999987

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=85.44  E-value=0.29  Score=26.74  Aligned_cols=27  Identities=15%  Similarity=-0.039  Sum_probs=17.6

Q ss_pred             EEeeecCCCCCCC-C-CHHHHHHHhhcCC
Q psy10832          2 VVEMVDGEPPFFN-E-PPLQAMRRIRDMP   28 (90)
Q Consensus         2 l~~~~~g~~p~~~-~-~~~~~~~~i~~~~   28 (90)
                      +|+|++|..||.+ . +.......+..+.
T Consensus       190 ~~~l~~g~~pf~~~~~~~~~~~~~~~~~~  218 (225)
T smart00221      190 LYELLWGPEPFSGEGEFTSLLSDVWSFGV  218 (225)
T ss_pred             HHHHHHCCCCccccchhHHHHHHHHhcCC
Confidence            5788889999977 3 3445555555553

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG1240|consensus

Probab=82.51  E-value=1.2  Score=31.63  Aligned_cols=27  Identities=30%  Similarity=0.538  Sum_probs=24.4

Q ss_pred             CHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832         39 SPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus        39 ~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      +.+.+.+|..|++.||.+|.++++.++
T Consensus       264 d~~~Rnlil~Mi~rdPs~RlSAedyL~  290 (1431)
T KOG1240|consen  264 DVSLRNLILSMIQRDPSKRLSAEDYLQ  290 (1431)
T ss_pred             CccHHHHHHHHHccCchhccCHHHHHH
Confidence            557899999999999999999998775

>KOG1266|consensus

Probab=82.22  E-value=0.44  Score=29.23  Aligned_cols=33  Identities=30%  Similarity=0.395  Sum_probs=28.0

Q ss_pred             HHHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832         41 RLQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus        41 ~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      .-++++..|+.-.|..|+++..++.|+..-...
T Consensus       306 lqr~~i~kcl~~eP~~rp~ar~llfHpllfeVh  338 (458)
T KOG1266|consen  306 LQRGSITKCLEGEPNGRPDARLLLFHPLLFEVH  338 (458)
T ss_pred             cccCcCcccccCCCCCCcchhhhhcCceeeecc
Confidence            346889999999999999999999999765544

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	90
2x4z_A	296	Crystal Structure Of The Human P21-Activated Kinase		1e-33
2bva_A	292	Crystal Structure Of The Human P21-Activated Kinase		1e-33
2cdz_A	303	Crystal Structure Of The Human P21-Activated Kinase		2e-33
2q0n_A	301	Structure Of Human P21 Activating Kinase 4 (Pak4) I		2e-33
4fif_A	346	Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid		3e-33
4fie_A	423	Full-Length Human Pak4 Length = 423		3e-33
2f57_A	317	Crystal Structure Of The Human P21-activated Kinase		3e-31
2c30_A	321	Crystal Structure Of The Human P21-Activated Kinase		3e-30
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		6e-15
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		7e-15
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		8e-15
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		1e-14
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		1e-14
3com_A	314	Crystal Structure Of Mst1 Kinase Length = 314		2e-11
2x7f_A	326	Crystal Structure Of The Kinase Domain Of Human Tra		9e-09
2jfm_A	325	Crystal Structure Of Human Ste20-Like Kinase (Unlig		8e-07
2j51_A	325	Crystal Structure Of Human Ste20-Like Kinase Bound		8e-07
2jfl_A	325	Crystal Structure Of Human Ste20-Like Kinase ( Diph		9e-07
2uv2_A	287	Crystal Structure Of Human Ste20-Like Kinase Bound		1e-06
4bc6_A	293	Crystal Structure Of Human Serine Threonine Kinase-		1e-06
2j7t_A	302	Crystal Structure Of Human Serine Threonine Kinase-		1e-06
2xik_A	294	Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K		6e-06
3zhp_C	294	Human Mst3 (stk24) In Complex With Mo25beta Length		2e-05
3ckw_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		2e-05
3ckx_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		2e-05
3a7f_A	303	Human Mst3 Kinase Length = 303		3e-05
2gcd_A	309	Tao2 Kinase Domain-Staurosporine Structure Length =		4e-05
2vwi_A	303	Structure Of The Osr1 Kinase, A Hypertension Drug T		5e-05
3dak_A	290	Crystal Structure Of Domain-Swapped Osr1 Kinase Dom		5e-05
1u5q_A	348	Crystal Structure Of The Tao2 Kinase Domain: Activa		5e-05
3soa_A	444	Full-Length Human Camkii Length = 444		1e-04
2vz6_A	313	Structure Of Human Calcium Calmodulin Dependent Pro		1e-04
2wel_A	327	Crystal Structure Of Su6656-Bound CalciumCALMODULIN		2e-04
2vn9_A	301	Crystal Structure Of Human Calcium Calmodulin Depen		2e-04
3bhh_A	295	Crystal Structure Of Human Calcium/calmodulin-depen		2e-04
3ggf_A	301	Crystal Structure Of Human SerineTHREONINE-Protein		2e-04
1tki_A	321	Autoinhibited Serine Kinase Domain Of The Giant Mus		4e-04
2v7o_A	336	Crystal Structure Of Human Calcium-Calmodulin-Depen		7e-04
4an2_A	301	Crystal Structures Of Human Mek1 With Carboxamide-B		7e-04

>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296

Iteration: 1
 Score =  137 bits (345), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 65/86 (75%), Positives = 77/86 (89%)
Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
           MV+EMVDGEPP+FNEPPL+AM+ IRD  PP+LKN HKVSP L+GFL+RLLVRDP QRATA
Sbjct: 209 MVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATA 268
Query: 61  AELLQHPFLRQAGPPALLVPLMKGSR 86
           AELL+HPFL +AGPPA +VPLM+ +R
Sbjct: 269 AELLKHPFLAKAGPPASIVPLMRQNR 294

>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292

Iteration: 1
 Score =  137 bits (345), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 65/86 (75%), Positives = 77/86 (89%)
Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
           MV+EMVDGEPP+FNEPPL+AM+ IRD  PP+LKN HKVSP L+GFL+RLLVRDP QRATA
Sbjct: 205 MVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATA 264
Query: 61  AELLQHPFLRQAGPPALLVPLMKGSR 86
           AELL+HPFL +AGPPA +VPLM+ +R
Sbjct: 265 AELLKHPFLAKAGPPASIVPLMRQNR 290

>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303

Iteration: 1
 Score =  137 bits (345), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 65/86 (75%), Positives = 77/86 (89%)
Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
           MV+EMVDGEPP+FNEPPL+AM+ IRD  PP+LKN HKVSP L+GFL+RLLVRDP QRATA
Sbjct: 216 MVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATA 275
Query: 61  AELLQHPFLRQAGPPALLVPLMKGSR 86
           AELL+HPFL +AGPPA +VPLM+ +R
Sbjct: 276 AELLKHPFLAKAGPPASIVPLMRQNR 301

>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301

Iteration: 1
 Score =  137 bits (345), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 65/86 (75%), Positives = 77/86 (89%)
Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
           MV+EMVDGEPP+FNEPPL+AM+ IRD  PP+LKN HKVSP L+GFL+RLLVRDP QRATA
Sbjct: 214 MVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATA 273
Query: 61  AELLQHPFLRQAGPPALLVPLMKGSR 86
           AELL+HPFL +AGPPA +VPLM+ +R
Sbjct: 274 AELLKHPFLAKAGPPASIVPLMRQNR 299

>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346

Iteration: 1
 Score =  136 bits (342), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 65/86 (75%), Positives = 77/86 (89%)
Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
           MV+EMVDGEPP+FNEPPL+AM+ IRD  PP+LKN HKVSP L+GFL+RLLVRDP QRATA
Sbjct: 259 MVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATA 318
Query: 61  AELLQHPFLRQAGPPALLVPLMKGSR 86
           AELL+HPFL +AGPPA +VPLM+ +R
Sbjct: 319 AELLKHPFLAKAGPPASIVPLMRQNR 344

>pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423

Iteration: 1
 Score =  136 bits (342), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 65/86 (75%), Positives = 77/86 (89%)
Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
           MV+EMVDGEPP+FNEPPL+AM+ IRD  PP+LKN HKVSP L+GFL+RLLVRDP QRATA
Sbjct: 336 MVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATA 395
Query: 61  AELLQHPFLRQAGPPALLVPLMKGSR 86
           AELL+HPFL +AGPPA +VPLM+ +R
Sbjct: 396 AELLKHPFLAKAGPPASIVPLMRQNR 421

>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317

Iteration: 1
 Score =  129 bits (325), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 60/87 (68%), Positives = 74/87 (85%)
Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
           MV+EM+DGEPP+FNEPPLQAMRRIRD  PP++K+ HKVS  L+GFL+ +LVR+P QRATA
Sbjct: 230 MVIEMIDGEPPYFNEPPLQAMRRIRDSLPPRVKDLHKVSSVLRGFLDLMLVREPSQRATA 289
Query: 61  AELLQHPFLRQAGPPALLVPLMKGSRH 87
            ELL HPFL+ AGPP+ +VPLM+  RH
Sbjct: 290 QELLGHPFLKLAGPPSCIVPLMRQYRH 316

>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321

Iteration: 1
 Score =  126 bits (317), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 61/92 (66%), Positives = 74/92 (80%), Gaps = 2/92 (2%)
Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
           MV+EMVDGEPP+F++ P+QAM+R+RD PPPKLKN+HKVSP L+ FLER+LVRDP +RATA
Sbjct: 230 MVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERATA 289
Query: 61  AELLQHPFLRQAGPPALLVPLMKGSRH--SNC 90
            ELL HPFL Q G P  LVPL++  R   S C
Sbjct: 290 QELLDHPFLLQTGLPECLVPLIQLYRKQTSTC 321

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score = 75.5 bits (184), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 37/88 (42%), Positives = 55/88 (62%)
Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
           M +EM++GEPP+ NE PL+A+  I     P+L+N  K+S   + FL R L  D  +R +A
Sbjct: 205 MAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSA 264
Query: 61  AELLQHPFLRQAGPPALLVPLMKGSRHS 88
            ELLQH FL+ A P + L PL+  ++ +
Sbjct: 265 KELLQHQFLKIAKPLSSLTPLIAAAKEA 292

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score = 75.5 bits (184), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 37/88 (42%), Positives = 55/88 (62%)
Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
           M +EM++GEPP+ NE PL+A+  I     P+L+N  K+S   + FL R L  D  +R +A
Sbjct: 205 MAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSA 264
Query: 61  AELLQHPFLRQAGPPALLVPLMKGSRHS 88
            ELLQH FL+ A P + L PL+  ++ +
Sbjct: 265 KELLQHQFLKIAKPLSSLTPLIAAAKEA 292

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score = 75.5 bits (184), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 37/88 (42%), Positives = 55/88 (62%)
Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
           M +EM++GEPP+ NE PL+A+  I     P+L+N  K+S   + FL R L  D  +R +A
Sbjct: 205 MAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSA 264
Query: 61  AELLQHPFLRQAGPPALLVPLMKGSRHS 88
            ELLQH FL+ A P + L PL+  ++ +
Sbjct: 265 KELLQHQFLKIAKPLSSLTPLIAAAKEA 292

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 74.7 bits (182), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/88 (40%), Positives = 55/88 (62%)
Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
           M +EM++GEPP+ NE PL+A+  I     P+L+N  K+S   + FL R L  D  +R +A
Sbjct: 206 MAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSA 265
Query: 61  AELLQHPFLRQAGPPALLVPLMKGSRHS 88
            EL+QH FL+ A P + L PL+  ++ +
Sbjct: 266 KELIQHQFLKIAKPLSSLTPLIAAAKEA 293

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 74.7 bits (182), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/88 (40%), Positives = 55/88 (62%)
Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
           M +EM++GEPP+ NE PL+A+  I     P+L+N  K+S   + FL R L  D  +R +A
Sbjct: 206 MAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSA 265
Query: 61  AELLQHPFLRQAGPPALLVPLMKGSRHS 88
            EL+QH FL+ A P + L PL+  ++ +
Sbjct: 266 KELIQHQFLKIAKPLSSLTPLIAAAKEA 293

>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/80 (38%), Positives = 49/80 (61%)
Query: 3   VEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAE 62
           +EM +G+PP+ +  P++A+  I   PPP  +     S     F+++ LV+ P QRATA +
Sbjct: 216 IEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQRATATQ 275
Query: 63  LLQHPFLRQAGPPALLVPLM 82
           LLQHPF+R A   ++L  L+
Sbjct: 276 LLQHPFVRSAKGVSILRDLI 295

>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326

Iteration: 1
 Score = 55.1 bits (131), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 3   VEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAE 62
           +EM +G PP  +  P++A+  I   P P+LK + K S + Q F+E  LV++  QR    +
Sbjct: 225 IEMAEGAPPLCDMHPMRALFLIPRNPAPRLK-SKKWSKKFQSFIESCLVKNHSQRPATEQ 283
Query: 63  LLQHPFLR 70
           L++HPF+R
Sbjct: 284 LMKHPFIR 291

>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325

Iteration: 1
 Score = 48.5 bits (114), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 22/68 (32%), Positives = 38/68 (55%)
Query: 2   VVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAA 61
           ++EM + EPP     P++ + +I    PP L    + S   + FL++ L ++   R T +
Sbjct: 230 LIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTS 289
Query: 62  ELLQHPFL 69
           +LLQHPF+
Sbjct: 290 QLLQHPFV 297

>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 48.5 bits (114), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 22/68 (32%), Positives = 38/68 (55%)
Query: 2   VVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAA 61
           ++EM + EPP     P++ + +I    PP L    + S   + FL++ L ++   R T +
Sbjct: 230 LIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTS 289
Query: 62  ELLQHPFL 69
           +LLQHPF+
Sbjct: 290 QLLQHPFV 297

>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 48.5 bits (114), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 22/68 (32%), Positives = 38/68 (55%)
Query: 2   VVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAA 61
           ++EM + EPP     P++ + +I    PP L    + S   + FL++ L ++   R T +
Sbjct: 230 LIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTS 289
Query: 62  ELLQHPFL 69
           +LLQHPF+
Sbjct: 290 QLLQHPFV 297

>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/68 (35%), Positives = 38/68 (55%)
Query: 2   VVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAA 61
           ++EM   EPP     P++ + +I    PP L    K S   + FL+  L ++P  R +AA
Sbjct: 204 LIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAA 263
Query: 62  ELLQHPFL 69
           +LL+HPF+
Sbjct: 264 QLLEHPFV 271

>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/68 (35%), Positives = 38/68 (55%)
Query: 2   VVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAA 61
           ++EM   EPP     P++ + +I    PP L    K S   + FL+  L ++P  R +AA
Sbjct: 212 LIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAA 271
Query: 62  ELLQHPFL 69
           +LL+HPF+
Sbjct: 272 QLLEHPFV 279

>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 3   VEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAE 62
           +E+  GEPP  +  P++ +  I    PP L+  H  S   + F+E  L +DP  R TA E
Sbjct: 207 IELAKGEPPNSDLHPMRVLFLIPKNSPPTLEGQH--SKPFKEFVEACLNKDPRFRPTAKE 264
Query: 63  LLQHPFL 69
           LL+H F+
Sbjct: 265 LLKHKFI 271

>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 3   VEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAE 62
           +E+  GEPP     P++ +  I    PP L+  +  S  L+ F+E  L ++P  R TA E
Sbjct: 215 IELARGEPPHSELHPMKVLFLIPKNNPPTLEGNY--SKPLKEFVEACLNKEPSFRPTAKE 272
Query: 63  LLQHPF-LRQAGPPALLVPLM 82
           LL+H F LR A   + L  L+
Sbjct: 273 LLKHKFILRNAKKTSYLTELI 293

>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 3   VEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAE 62
           +E+  GEPP     P++ +  I    PP L+  +  S  L+ F+E  L ++P  R TA E
Sbjct: 195 IELARGEPPHSELHPMKVLFLIPKNNPPTLEGNY--SKPLKEFVEACLNKEPSFRPTAKE 252
Query: 63  LLQHPF-LRQAGPPALLVPLM 82
           LL+H F LR A   + L  L+
Sbjct: 253 LLKHKFILRNAKKTSYLTELI 273

>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 3   VEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAE 62
           +E+  GEPP     P++ +  I    PP L+  +  S  L+ F+E  L ++P  R TA E
Sbjct: 195 IELARGEPPHSELHPMKVLFLIPKNNPPTLEGNY--SKPLKEFVEACLNKEPSFRPTAKE 252
Query: 63  LLQHPF-LRQAGPPALLVPLM 82
           LL+H F LR A   + L  L+
Sbjct: 253 LLKHKFILRNAKKTSYLTELI 273

>pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 3   VEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAE 62
           +E+  GEPP     P++ +  I    PP L+  +  S  L+ F+E  L ++P  R TA E
Sbjct: 210 IELARGEPPHSELHPMKVLFLIPKNNPPTLEGNY--SKPLKEFVEACLNKEPSFRPTAKE 267
Query: 63  LLQHPF-LRQAGPPALLVPLM 82
           LL+H F LR A   + L  L+
Sbjct: 268 LLKHKFILRNAKKTSYLTELI 288

>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/84 (27%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 3   VEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAE 62
           +E+ + +PP FN   + A+  I     P L++ H  S   + F++  L + P  R T+  
Sbjct: 205 IELAERKPPLFNMNAMSALYHIAQNESPALQSGH-WSEYFRNFVDSCLQKIPQDRPTSEV 263
Query: 63  LLQHPFLRQAGPPALLVPLMKGSR 86
           LL+H F+ +  PP +++ L++ ++
Sbjct: 264 LLKHRFVLRERPPTVIMDLIQRTK 287

>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Query: 3   VEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKN-------THKVSPRLQGFLERLLVRDPL 55
           +E+  G  P+   PP++ +       PP L+          K     +  +   L +DP 
Sbjct: 218 IELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPE 277
Query: 56  QRATAAELLQHPFLRQA 72
           +R TAAELL+H F ++A
Sbjct: 278 KRPTAAELLRHKFFQKA 294

>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Query: 3   VEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKN-------THKVSPRLQGFLERLLVRDPL 55
           +E+  G  P+   PP++ +       PP L+          K     +  +   L +DP 
Sbjct: 213 IELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPE 272
Query: 56  QRATAAELLQHPFLRQA 72
           +R TAAELL+H F ++A
Sbjct: 273 KRPTAAELLRHKFFQKA 289

>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 23/86 (26%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 3   VEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAE 62
           +E+ + +PP FN   + A+  I     P L++ H  S   + F++  L + P  R T+  
Sbjct: 244 IELAERKPPLFNMNAMSALYHIAQNESPALQSGH-WSEYFRNFVDSCLQKIPQDRPTSEV 302
Query: 63  LLQHPFLRQAGPPALLVPLMKGSRHS 88
           LL+H F+ +  PP +++ L++ ++ +
Sbjct: 303 LLKHRFVLRERPPTVIMDLIQRTKDA 328

>pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 7/66 (10%)
Query: 8   GEPPFFNEPPLQAMRRIR----DMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAEL 63
           G PPF++E   +  ++I+    D P P+      V+P  +  + ++L  +P +R TAAE 
Sbjct: 209 GYPPFWDEDQHRLYQQIKAGAYDFPSPEWDT---VTPEAKDLINKMLTINPSKRITAAEA 265
Query: 64  LQHPFL 69
           L+HP++
Sbjct: 266 LKHPWI 271

>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 7/66 (10%)
Query: 8   GEPPFFNEPPLQAMRRIR----DMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAEL 63
           G PPF++E   +  ++I+    D P P+      V+P  +  + ++L  +P +R TAAE 
Sbjct: 220 GYPPFWDEDQHRLYQQIKAGAYDFPSPEWDT---VTPEAKDLINKMLTINPSKRITAAEA 276
Query: 64  LQHPFL 69
           L+HP++
Sbjct: 277 LKHPWI 282

>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 8   GEPPFFNEPPLQAMRRIR----DMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAEL 63
           G PPF++E   +  ++I+    D P P+      V+P  +  + ++L  +P +R TA+E 
Sbjct: 202 GYPPFWDEDQHRLYQQIKAGAYDFPSPEWDT---VTPEAKDLINKMLTINPAKRITASEA 258
Query: 64  LQHPFLRQ 71
           L+HP++ Q
Sbjct: 259 LKHPWICQ 266

>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 8   GEPPFFNEPPLQAMRRIR----DMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAEL 63
           G PPF++E   +  ++I+    D P P+      V+P  +  + ++L  +P +R TA+E 
Sbjct: 202 GYPPFWDEDQHRLYQQIKAGAYDFPSPEWDT---VTPEAKDLINKMLTINPAKRITASEA 258
Query: 64  LQHPFLRQ 71
           L+HP++ Q
Sbjct: 259 LKHPWICQ 266

>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 7/68 (10%)
Query: 8   GEPPFFNEPPLQAMRRIR----DMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAEL 63
           G PPF++E   +  ++I+    D P P+      V+P  +  + ++L  +P +R TA E 
Sbjct: 202 GYPPFWDEDQHKLYQQIKAGAYDFPSPEWDT---VTPEAKNLINQMLTINPAKRITAHEA 258
Query: 64  LQHPFLRQ 71
           L+HP++ Q
Sbjct: 259 LKHPWVCQ 266

>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301

Iteration: 1
 Score = 40.4 bits (93), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 3   VEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAE 62
           +E+  GEPP  +  P++ +  I    PP L      S   + F++  L +DP  R TA E
Sbjct: 211 IELAKGEPPNSDMHPMRVLFLIPKNNPPTLVGDFTKS--FKEFIDACLNKDPSFRPTAKE 268
Query: 63  LLQHPFL 69
           LL+H F+
Sbjct: 269 LLKHKFI 275

>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle Protein Titin Length = 321

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHK-VSPRLQGFLERLLVRDPLQRAT 59
           +V  ++ G  PF  E   Q +  I +      +   K +S     F++RLLV++   R T
Sbjct: 192 LVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMT 251
Query: 60  AAELLQHPFLRQ 71
           A+E LQHP+L+Q
Sbjct: 252 ASEALQHPWLKQ 263

>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 38/68 (55%), Gaps = 7/68 (10%)
Query: 8   GEPPFFNEPPLQAMRRIR----DMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAEL 63
           G PPF++E   +  ++I+    D P P+      V+P  +  + ++L  +P +R TA + 
Sbjct: 229 GYPPFWDEDQHKLYQQIKAGAYDFPSPEWDT---VTPEAKNLINQMLTINPAKRITADQA 285
Query: 64  LQHPFLRQ 71
           L+HP++ Q
Sbjct: 286 LKHPWVCQ 293

>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 7/74 (9%)
Query: 2   VVEMVDGEPPFFNEPPL---QAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRA 58
           +VEM  G  P    PP+   + +  I + PPPKL +    S   Q F+ + L+++P +RA
Sbjct: 196 LVEMAVGRYP---RPPMAIFELLDYIVNEPPPKLPSA-VFSLEFQDFVNKCLIKNPAERA 251
Query: 59  TAAELLQHPFLRQA 72
              +L+ H F++++
Sbjct: 252 DLKQLMVHAFIKRS 265

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	90
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	7e-39
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	4e-38
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	2e-31
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	5e-30
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	5e-28
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	1e-27
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	3e-24
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	5e-24
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	2e-23
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	3e-19
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	6e-19
2dyl_A	318	Dual specificity mitogen-activated protein kinase	5e-18
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	6e-18
3aln_A	327	Dual specificity mitogen-activated protein kinase;	8e-18
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	7e-17
3fme_A	290	Dual specificity mitogen-activated protein kinase;	8e-17
3an0_A	340	Dual specificity mitogen-activated protein kinase;	4e-16
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	2e-15
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	4e-15
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	1e-14
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	1e-14
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	5e-13
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	5e-12
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	6e-12
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	3e-11
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	5e-11
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	6e-11
2a19_B	284	Interferon-induced, double-stranded RNA-activated	6e-11
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	7e-11
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	8e-11
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	9e-11
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	2e-10
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	2e-10
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	2e-10
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	3e-10
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	4e-10
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	4e-10
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	6e-10
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	7e-10
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	8e-10
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	8e-10
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	1e-09
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	2e-09
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	2e-09
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	3e-09
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	3e-09
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	4e-09
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	4e-09
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	4e-09
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	4e-09
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	5e-09
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	5e-09
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	5e-09
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	6e-09
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	8e-09
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	8e-09
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	8e-09
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	9e-09
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	1e-08
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	1e-08
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	1e-08
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	2e-08
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	2e-08
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	4e-08
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	4e-08
3bhy_A	283	Death-associated protein kinase 3; death associate	4e-08
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	4e-08
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	5e-08
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	5e-08
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	6e-08
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	6e-08
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	6e-08
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	8e-08
3ork_A	311	Serine/threonine protein kinase; structural genomi	9e-08
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	9e-08
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	1e-07
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	1e-07
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	1e-07
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	1e-07
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	2e-07
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	2e-07
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	2e-07
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	2e-07
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	2e-07
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	3e-07
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	3e-07
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	3e-07
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	3e-07
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	3e-07
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	4e-07
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	4e-07
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	4e-07
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	4e-07
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	5e-07
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	7e-07
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	7e-07
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	8e-07
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	8e-07
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	9e-07
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	9e-07
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	1e-06
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	1e-06
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	2e-06
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	2e-06
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	2e-06
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	2e-06
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	2e-06
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	2e-06
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	3e-06
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	3e-06
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	3e-06
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	3e-06
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	4e-06
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	5e-06
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	5e-06
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	6e-06
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	6e-06
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	6e-06
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	6e-06
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	6e-06
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	7e-06
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	7e-06
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	7e-06
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	8e-06
3rp9_A	458	Mitogen-activated protein kinase; structural genom	8e-06
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	8e-06
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	9e-06
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	9e-06
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	9e-06
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	1e-05
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	1e-05
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	2e-05
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	3e-05
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	4e-05
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	6e-05
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	7e-05
3niz_A	311	Rhodanese family protein; structural genomics, str	7e-05
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	8e-05
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	9e-05
3o0g_A	292	Cell division protein kinase 5; kinase activator c	9e-05
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	1e-04
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	1e-04
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	1e-04
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	1e-04
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	1e-04
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	2e-04
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	2e-04
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	3e-04
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	3e-04
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	3e-04
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	4e-04
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	6e-04

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score =  130 bits (328), Expect = 7e-39
 Identities = 59/89 (66%), Positives = 72/89 (80%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
           MV+EMVDGEPP+F++ P+QAM+R+RD PPPKLKN+HKVSP L+ FLER+LVRDP +RATA
Sbjct: 230 MVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERATA 289

Query: 61  AELLQHPFLRQAGPPALLVPLMKGSRHSN 89
            ELL HPFL Q G P  LVPL++  R   
Sbjct: 290 QELLDHPFLLQTGLPECLVPLIQLYRKQT 318

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score =  127 bits (321), Expect = 4e-38
 Identities = 37/88 (42%), Positives = 55/88 (62%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
           M +EM++GEPP+ NE PL+A+  I     P+L+N  K+S   + FL R L  D  +R +A
Sbjct: 205 MAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSA 264

Query: 61  AELLQHPFLRQAGPPALLVPLMKGSRHS 88
            ELLQH FL+ A P + L PL+  ++ +
Sbjct: 265 KELLQHQFLKIAKPLSSLTPLIAAAKEA 292

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score =  110 bits (278), Expect = 2e-31
 Identities = 31/87 (35%), Positives = 50/87 (57%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
             +EM +G+PP+ +  P++A+  I   PPP  +     S     F+++ LV+ P QRATA
Sbjct: 214 TAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQRATA 273

Query: 61  AELLQHPFLRQAGPPALLVPLMKGSRH 87
            +LLQHPF+R A   ++L  L+  +  
Sbjct: 274 TQLLQHPFVRSAKGVSILRDLINEAMD 300

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score =  106 bits (267), Expect = 5e-30
 Identities = 26/86 (30%), Positives = 43/86 (50%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
            ++EM   EPP     P++ + +I    PP L    K S   + FL+  L ++P  R +A
Sbjct: 211 TLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSA 270

Query: 61  AELLQHPFLRQAGPPALLVPLMKGSR 86
           A+LL+HPF+        L  L+  ++
Sbjct: 271 AQLLEHPFVSSITSNKALRELVAEAK 296

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score =  102 bits (256), Expect = 5e-28
 Identities = 22/86 (25%), Positives = 45/86 (52%), Gaps = 1/86 (1%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
             +E+ + +PP FN   + A+  I     P L++    S   + F++  L + P  R T+
Sbjct: 242 TCIELAERKPPLFNMNAMSALYHIAQNESPALQSG-HWSEYFRNFVDSCLQKIPQDRPTS 300

Query: 61  AELLQHPFLRQAGPPALLVPLMKGSR 86
             LL+H F+ +  PP +++ L++ ++
Sbjct: 301 EVLLKHRFVLRERPPTVIMDLIQRTK 326

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score =  100 bits (252), Expect = 1e-27
 Identities = 18/86 (20%), Positives = 34/86 (39%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
           M++ M++G  P+          +I   PPP  +     +P     ++  L ++P+ RA+A
Sbjct: 245 MMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSCAPLTAQAIQEGLRKEPVHRASA 304

Query: 61  AELLQHPFLRQAGPPALLVPLMKGSR 86
            EL +           L  P     +
Sbjct: 305 MELRRKVGKALQEVGGLKSPWKGEYK 330

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 92.1 bits (229), Expect = 3e-24
 Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 1/83 (1%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
             +EM +G PP  +  P++A+  I   P P+LK+  K S + Q F+E  LV++  QR   
Sbjct: 223 TAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKS-KKWSKKFQSFIESCLVKNHSQRPAT 281

Query: 61  AELLQHPFLRQAGPPALLVPLMK 83
            +L++HPF+R       +   +K
Sbjct: 282 EQLMKHPFIRDQPNERQVRIQLK 304

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 90.9 bits (226), Expect = 5e-24
 Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 7/86 (8%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKN-------THKVSPRLQGFLERLLVRD 53
             +E+  G  P+   PP++ +       PP L+          K     +  +   L +D
Sbjct: 216 TAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKD 275

Query: 54  PLQRATAAELLQHPFLRQAGPPALLV 79
           P +R TAAELL+H F ++A     L 
Sbjct: 276 PEKRPTAAELLRHKFFQKAKNKEFLQ 301

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 89.3 bits (222), Expect = 2e-23
 Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 3/84 (3%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
             +E+  GEPP     P++ +  I    PP L+     S  L+ F+E  L ++P  R TA
Sbjct: 208 TAIELARGEPPHSELHPMKVLFLIPKNNPPTLEG--NYSKPLKEFVEACLNKEPSFRPTA 265

Query: 61  AELLQHPFL-RQAGPPALLVPLMK 83
            ELL+H F+ R A   + L  L+ 
Sbjct: 266 KELLKHKFILRNAKKTSYLTELID 289

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 78.2 bits (193), Expect = 3e-19
 Identities = 13/73 (17%), Positives = 29/73 (39%), Gaps = 4/73 (5%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRI--RDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRA 58
            ++EM   E P+        + R     + P          P ++  +E  + ++  +R 
Sbjct: 218 CMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFD--KVAIPEVKEIIEGCIRQNKDERY 275

Query: 59  TAAELLQHPFLRQ 71
           +  +LL H F ++
Sbjct: 276 SIKDLLNHAFFQE 288

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 77.3 bits (191), Expect = 6e-19
 Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 10/84 (11%)

Query: 2   VVEMVDGEPPFFN-EPPLQAMRRI---RDMPP-PKLKNTHKVSPRLQGFLERLLVRDPLQ 56
           ++EM  G+PPF+    P  AM ++   +  P  P+      +S   + F+ +    DP +
Sbjct: 215 IIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPE-----SMSAEAKAFILKCFEPDPDK 269

Query: 57  RATAAELLQHPFLRQAGPPALLVP 80
           RA A +LL   FL+ +       P
Sbjct: 270 RACANDLLVDEFLKVSSKKKKTQP 293

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 75.1 bits (185), Expect = 5e-18
 Identities = 18/74 (24%), Positives = 35/74 (47%), Gaps = 1/74 (1%)

Query: 3   VEMVDGEPPFFN-EPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAA 61
           VE+  G+ P+ N +   + + ++    PP L      S   Q F++  L +D  +R    
Sbjct: 220 VELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYN 279

Query: 62  ELLQHPFLRQAGPP 75
           +LL+H F+++    
Sbjct: 280 KLLEHSFIKRYETL 293

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 75.3 bits (185), Expect = 6e-18
 Identities = 26/128 (20%), Positives = 40/128 (31%), Gaps = 45/128 (35%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTH------------------------ 36
              E+ +G  PF + P  Q +    +   P L +T                         
Sbjct: 226 TACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSL 285

Query: 37  -------------------KVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPPA- 76
                                SP    F+E+ L R+P  R +A+ LL H F +Q    A 
Sbjct: 286 TTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIKRRAS 345

Query: 77  -LLVPLMK 83
             L  L++
Sbjct: 346 EALPELLR 353

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 74.7 bits (184), Expect = 8e-18
 Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 3/73 (4%)

Query: 3   VEMVDGEPPFFN-EPPLQAMRRIRDMPPPKLKNTHKV--SPRLQGFLERLLVRDPLQRAT 59
            E+  G  P+         + ++    PP+L N+ +   SP    F+   L +D  +R  
Sbjct: 220 YELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPK 279

Query: 60  AAELLQHPFLRQA 72
             ELL+HPF+   
Sbjct: 280 YKELLKHPFILMY 292

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 72.0 bits (177), Expect = 7e-17
 Identities = 18/72 (25%), Positives = 28/72 (38%), Gaps = 5/72 (6%)

Query: 2   VVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAA 61
           VV     EP   N         IR    P++     +S      L+ ++  DP +R +A 
Sbjct: 221 VVCAAGAEPLPRNGDQ---WHEIRQGRLPRI--PQVLSQEFTELLKVMIHPDPERRPSAM 275

Query: 62  ELLQHPFLRQAG 73
            L++H  L  A 
Sbjct: 276 ALVKHSVLLSAS 287

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 71.5 bits (176), Expect = 8e-17
 Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 2/73 (2%)

Query: 1   MVVEMVDGEPPFFN-EPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRAT 59
            ++E+     P+ +   P Q ++++ + P P+L    K S     F  + L ++  +R T
Sbjct: 202 TMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPA-DKFSAEFVDFTSQCLKKNSKERPT 260

Query: 60  AAELLQHPFLRQA 72
             EL+QHPF    
Sbjct: 261 YPELMQHPFFTLH 273

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 68.1 bits (167), Expect = 2e-15
 Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 4/70 (5%)

Query: 2   VVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAA 61
           ++E+             Q +R+    P      T  +S  L+  L  +L  DP  RATA 
Sbjct: 245 ILEVACNMELPHGGEGWQQLRQGYLPPEF----TAGLSSELRSVLVMMLEPDPKLRATAE 300

Query: 62  ELLQHPFLRQ 71
            LL  P LRQ
Sbjct: 301 ALLALPVLRQ 310

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 67.4 bits (165), Expect = 4e-15
 Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 2/76 (2%)

Query: 1   MVVEMVDGEPPFFNEP-PLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRAT 59
           ++  M  G+ PF      +  +  I D P  +++        LQ  L+  L RDP QR +
Sbjct: 209 ILYYMTYGKTPFQQIINQISKLHAIID-PNHEIEFPDIPEKDLQDVLKCCLKRDPKQRIS 267

Query: 60  AAELLQHPFLRQAGPP 75
             ELL HP+++    P
Sbjct: 268 IPELLAHPYVQIQTHP 283

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 66.0 bits (161), Expect = 1e-14
 Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 2/76 (2%)

Query: 1   MVVEMVDGEPPFFNEP-PLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRAT 59
           ++  M  G+ PF      +  +  I D P  +++        LQ  L+  L RDP QR +
Sbjct: 256 ILYYMTYGKTPFQQIINQISKLHAIID-PNHEIEFPDIPEKDLQDVLKCCLKRDPKQRIS 314

Query: 60  AAELLQHPFLRQAGPP 75
             ELL HP+++    P
Sbjct: 315 IPELLAHPYVQIQTHP 330

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 65.4 bits (160), Expect = 1e-14
 Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 2/76 (2%)

Query: 1   MVVEMVDGEPPFFNEP-PLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRAT 59
           ++  M  G+ PF      +  +  I D P  +++        LQ  L+  L RDP QR +
Sbjct: 228 ILYYMTYGKTPFQQIINQISKLHAIID-PNHEIEFPDIPEKDLQDVLKCCLKRDPKQRIS 286

Query: 60  AAELLQHPFLRQAGPP 75
             ELL HP+++    P
Sbjct: 287 IPELLAHPYVQIQTHP 302

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 61.6 bits (150), Expect = 5e-13
 Identities = 12/68 (17%), Positives = 26/68 (38%), Gaps = 2/68 (2%)

Query: 4   EMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAEL 63
           E+   +  F        + +I     P +      S  L+  + +L  R+P  R +   +
Sbjct: 217 ELCTLKHAFEAGSMKNLVLKIISGSFPPVSL--HYSYDLRSLVSQLFKRNPRDRPSVNSI 274

Query: 64  LQHPFLRQ 71
           L+  F+ +
Sbjct: 275 LEKGFIAK 282

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 58.4 bits (142), Expect = 5e-12
 Identities = 14/68 (20%), Positives = 29/68 (42%), Gaps = 2/68 (2%)

Query: 4   EMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAEL 63
           E+    PPF      +   +IR+    ++    + S  L   + R+L      R +  E+
Sbjct: 208 ELCALMPPFTAFSQKELAGKIREGKFRRIPY--RYSDELNEIITRMLNLKDYHRPSVEEI 265

Query: 64  LQHPFLRQ 71
           L++P + +
Sbjct: 266 LENPLILE 273

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 58.6 bits (142), Expect = 6e-12
 Identities = 15/68 (22%), Positives = 27/68 (39%)

Query: 5   MVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELL 64
           + +G  PF      QA   +       L          +  +E+++  DP +R +A  +L
Sbjct: 223 ISEGSHPFGKSLQRQANILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVL 282

Query: 65  QHPFLRQA 72
           +HPF    
Sbjct: 283 KHPFFWSL 290

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 56.5 bits (137), Expect = 3e-11
 Identities = 14/71 (19%), Positives = 25/71 (35%), Gaps = 3/71 (4%)

Query: 4   EMVDGEPPFFNEP--PLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAA 61
           EM   + PF+ +        ++I     P L + H  S  L+  +   +  DP +R    
Sbjct: 228 EMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDH-YSEELRQLVNMCINPDPEKRPDVT 286

Query: 62  ELLQHPFLRQA 72
            +        A
Sbjct: 287 YVYDVAKRMHA 297

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 56.0 bits (135), Expect = 5e-11
 Identities = 17/70 (24%), Positives = 26/70 (37%), Gaps = 7/70 (10%)

Query: 8   GEPPFFNEPPLQAMRRIR----DMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAEL 63
           G  PF        + ++         P       +SP  +  L  LL R+  +R  A   
Sbjct: 272 GAVPFPGVNDADTISQVLNKKLCFENPNYNV---LSPLARDLLSNLLNRNVDERFDAMRA 328

Query: 64  LQHPFLRQAG 73
           LQHP++ Q  
Sbjct: 329 LQHPWISQFS 338

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 55.8 bits (135), Expect = 6e-11
 Identities = 13/77 (16%), Positives = 27/77 (35%), Gaps = 5/77 (6%)

Query: 10  PPFFNEPPLQAMRRIRD---MPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQH 66
           P       +  ++++R      PP   +        +  +  L+  DP +R  A  LL  
Sbjct: 227 PFSTGMERVNILKKLRSVSIEFPPDFDD--NKMKVEKKIIRLLIDHDPNKRPGARTLLNS 284

Query: 67  PFLRQAGPPALLVPLMK 83
            +L       ++   +K
Sbjct: 285 GWLPVKHQDEVIKEALK 301

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 55.4 bits (134), Expect = 6e-11
 Identities = 12/71 (16%), Positives = 25/71 (35%), Gaps = 7/71 (9%)

Query: 4   EMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAEL 63
           E++      F          +RD              + +  L++LL + P  R   +E+
Sbjct: 213 ELLHVCDTAFETSKF--FTDLRDGIISD-----IFDKKEKTLLQKLLSKKPEDRPNTSEI 265

Query: 64  LQHPFLRQAGP 74
           L+   + +  P
Sbjct: 266 LRTLTVWKKSP 276

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 55.3 bits (134), Expect = 7e-11
 Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 7/78 (8%)

Query: 8   GEPPFFNEPPLQAMRRIR----DMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAEL 63
           G PPF++E   +   +I+    D P P+      V+P  +  ++ +L  +P +R TA + 
Sbjct: 203 GYPPFWDEDQHRLYAQIKAGAYDYPSPEWDT---VTPEAKSLIDSMLTVNPKKRITADQA 259

Query: 64  LQHPFLRQAGPPALLVPL 81
           L+ P++      A  +  
Sbjct: 260 LKVPWICNRERVASAIHR 277

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 55.5 bits (134), Expect = 8e-11
 Identities = 18/91 (19%), Positives = 32/91 (35%), Gaps = 17/91 (18%)

Query: 4   EMVDGEPPFFNEPPLQAM-RRIR----DMPPPKLKNTHK------------VSPRLQGFL 46
            M     PF  +  L  +   IR    + P  +    +             +S     FL
Sbjct: 244 VMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFL 303

Query: 47  ERLLVRDPLQRATAAELLQHPFLRQAGPPAL 77
           +  L ++P +R T+ + L+H +L       L
Sbjct: 304 KLFLRKNPAERITSEDALKHEWLADTNIEDL 334

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 54.9 bits (133), Expect = 9e-11
 Identities = 19/80 (23%), Positives = 31/80 (38%), Gaps = 11/80 (13%)

Query: 4   EMVDGEPPFFNEPPLQAMRRIR----DMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRAT 59
           E + G+PPF      +  +RI       P         V+   +  + RLL  +P QR  
Sbjct: 199 EFLVGKPPFEANTYQETYKRISRVEFTFPD-------FVTEGARDLISRLLKHNPSQRPM 251

Query: 60  AAELLQHPFLRQAGPPALLV 79
             E+L+HP++          
Sbjct: 252 LREVLEHPWITANSSKPSNC 271

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 54.6 bits (131), Expect = 2e-10
 Identities = 9/71 (12%), Positives = 20/71 (28%), Gaps = 7/71 (9%)

Query: 4   EMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAEL 63
            +   + P   +  L     I        ++   +   ++  LE  L      R    + 
Sbjct: 305 WIWCADLPITKDAALGGSEWI-------FRSCKNIPQPVRALLEGFLRYPKEDRLLPLQA 357

Query: 64  LQHPFLRQAGP 74
           ++ P   Q   
Sbjct: 358 METPEYEQLRT 368

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 54.2 bits (131), Expect = 2e-10
 Identities = 22/87 (25%), Positives = 33/87 (37%), Gaps = 8/87 (9%)

Query: 8   GEPPFFNE-PPLQAMRRIR----DMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAE 62
           G PPF      +    +I     +  P        VS +    +++LLV DP  R T  E
Sbjct: 215 GYPPFSEHRTQVSLKDQITSGKYNFIPEVWAE---VSEKALDLVKKLLVVDPKARFTTEE 271

Query: 63  LLQHPFLRQAGPPALLVPLMKGSRHSN 89
            L+HP+L+          L+     S 
Sbjct: 272 ALRHPWLQDEDMKRKFQDLLSEENEST 298

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 53.9 bits (130), Expect = 2e-10
 Identities = 15/77 (19%), Positives = 34/77 (44%), Gaps = 7/77 (9%)

Query: 8   GEPPFFNEPPLQAMRRIR----DMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAEL 63
           G PPF+ +     ++R+         P+ +    +S   +  + ++L   P  R TA + 
Sbjct: 218 GTPPFYGKNEYDILKRVETGKYAFDLPQWRT---ISDDAKDLIRKMLTFHPSLRITATQC 274

Query: 64  LQHPFLRQAGPPALLVP 80
           L+HP++++       + 
Sbjct: 275 LEHPWIQKYSSETPTIS 291

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 53.9 bits (130), Expect = 3e-10
 Identities = 17/70 (24%), Positives = 36/70 (51%), Gaps = 7/70 (10%)

Query: 8   GEPPFFNEPPLQAMRRIR----DMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAEL 63
           G PPF  +   + +R++         P+ KN   VS   +  ++++L  D  +R +A + 
Sbjct: 233 GYPPFGGQTDQEILRKVEKGKYTFDSPEWKN---VSEGAKDLIKQMLQFDSQRRISAQQA 289

Query: 64  LQHPFLRQAG 73
           L+HP++++  
Sbjct: 290 LEHPWIKEMC 299

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 53.4 bits (129), Expect = 4e-10
 Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 3/74 (4%)

Query: 4   EMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAEL 63
           E + G PPF +    +  RRI ++    LK    +S   +  + +LL   P QR     +
Sbjct: 204 EFLVGMPPFDSPSHTETHRRIVNV---DLKFPPFLSDGSKDLISKLLRYHPPQRLPLKGV 260

Query: 64  LQHPFLRQAGPPAL 77
           ++HP+++      L
Sbjct: 261 MEHPWVKANSRRVL 274

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 53.2 bits (128), Expect = 4e-10
 Identities = 14/69 (20%), Positives = 28/69 (40%), Gaps = 7/69 (10%)

Query: 8   GEPPFFNEPPLQAMRRIR----DMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAEL 63
           G PPF        ++++         P+ K    VS   +  + ++L   P  R +A + 
Sbjct: 223 GCPPFNGANEYDILKKVEKGKYTFELPQWKK---VSESAKDLIRKMLTYVPSMRISARDA 279

Query: 64  LQHPFLRQA 72
           L H +++  
Sbjct: 280 LDHEWIQTY 288

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 52.6 bits (127), Expect = 6e-10
 Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 7/71 (9%)

Query: 8   GEPPFFNEPPLQAMRRIR----DMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAEL 63
           G PPF      + M +IR      P     N   VSP+ +  + RLL + P QR T+ + 
Sbjct: 203 GYPPFSAPTDSEVMLKIREGTFTFPEKDWLN---VSPQAESLIRRLLTKSPKQRITSLQA 259

Query: 64  LQHPFLRQAGP 74
           L+H +  +   
Sbjct: 260 LEHEWFEKQLS 270

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 52.8 bits (127), Expect = 7e-10
 Identities = 21/81 (25%), Positives = 32/81 (39%), Gaps = 8/81 (9%)

Query: 8   GEPPFFNE-PPLQAMRRIR----DMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAE 62
           G PPF      +    +I     +  P        VS +    +++LLV DP  R T  E
Sbjct: 340 GYPPFSEHRTQVSLKDQITSGKYNFIPEVWAE---VSEKALDLVKKLLVVDPKARFTTEE 396

Query: 63  LLQHPFLRQAGPPALLVPLMK 83
            L+HP+L+          L+ 
Sbjct: 397 ALRHPWLQDEDMKRKFQDLLS 417

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 52.4 bits (126), Expect = 8e-10
 Identities = 14/73 (19%), Positives = 29/73 (39%), Gaps = 7/73 (9%)

Query: 8   GEPPFFNEPPLQAMRRIR----DMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAEL 63
           G PPF  +     ++++            KN   +S   +  ++ +L  D  +R TA E 
Sbjct: 243 GYPPFGGQNDQDIIKKVEKGKYYFDFNDWKN---ISDEAKELIKLMLTYDYNKRCTAEEA 299

Query: 64  LQHPFLRQAGPPA 76
           L   ++++     
Sbjct: 300 LNSRWIKKYANNI 312

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 52.7 bits (126), Expect = 8e-10
 Identities = 11/74 (14%), Positives = 21/74 (28%), Gaps = 6/74 (8%)

Query: 4   EMVDGEPPFFNEPPLQ------AMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQR 57
            +     PF    P           R+         +   +   ++  + R L  D  +R
Sbjct: 285 RVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRR 344

Query: 58  ATAAELLQHPFLRQ 71
               E ++ P   Q
Sbjct: 345 LLPLEAMETPEFLQ 358

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 51.9 bits (125), Expect = 1e-09
 Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 7/72 (9%)

Query: 8   GEPPFFNEPPLQAMRRIR----DMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAEL 63
           G PPF++   +  +R I         P+  +    S  ++  + R LV  P +R TA E 
Sbjct: 225 GSPPFWHRKQMLMLRMIMSGNYQFGSPEWDD---YSDTVKDLVSRFLVVQPQKRYTAEEA 281

Query: 64  LQHPFLRQAGPP 75
           L HPF +Q    
Sbjct: 282 LAHPFFQQYVVE 293

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 51.5 bits (124), Expect = 2e-09
 Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 7/73 (9%)

Query: 8   GEPPFFNEPPLQAMRRIR----DMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAEL 63
           G PPF++E   +   +I+    D P P+      V+P  +  ++ +L  +P +R TA + 
Sbjct: 226 GYPPFWDEDQHRLYAQIKAGAYDYPSPEWDT---VTPEAKSLIDSMLTVNPKKRITADQA 282

Query: 64  LQHPFLRQAGPPA 76
           L+ P++      A
Sbjct: 283 LKVPWICNRERVA 295

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 51.1 bits (123), Expect = 2e-09
 Identities = 19/86 (22%), Positives = 32/86 (37%), Gaps = 7/86 (8%)

Query: 8   GEPPFFNEPPLQAMRRIR----DMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAEL 63
           G  PF  +   + +  +     +       N    S   + F+ RLLV+DP +R T  + 
Sbjct: 213 GASPFLGDTKQETLANVSAVNYEFEDEYFSN---TSALAKDFIRRLLVKDPKKRMTIQDS 269

Query: 64  LQHPFLRQAGPPALLVPLMKGSRHSN 89
           LQHP+++       L           
Sbjct: 270 LQHPWIKPKDTQQALSRKASAVNMEK 295

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 51.2 bits (123), Expect = 3e-09
 Identities = 20/87 (22%), Positives = 41/87 (47%), Gaps = 7/87 (8%)

Query: 8   GEPPFFNEPPLQAMRRIR----DMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAEL 63
           G  PF  +   + +  I     D+   + ++   +S   + F+ +LL+++   R +A+E 
Sbjct: 284 GLSPFLGDNDAETLNNILACRWDLEDEEFQD---ISEEAKEFISKLLIKEKSWRISASEA 340

Query: 64  LQHPFLRQAGPPALLVPLMKGSRHSNC 90
           L+HP+L      + L    K +R S+ 
Sbjct: 341 LKHPWLSDHKLHSRLSAQKKKNRGSDA 367

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 51.1 bits (123), Expect = 3e-09
 Identities = 21/78 (26%), Positives = 30/78 (38%), Gaps = 7/78 (8%)

Query: 8   GEPPFFNEPPLQAMRRIR----DMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAEL 63
              PF  E   +    I     D       +   VS     F++ LLV++P +R TA   
Sbjct: 229 HTSPFVGEDNQETYLNISQVNVDYSEETFSS---VSQLATDFIQSLLVKNPEKRPTAEIC 285

Query: 64  LQHPFLRQAGPPALLVPL 81
           L H +L+Q     L  P 
Sbjct: 286 LSHSWLQQWDFENLFHPE 303

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 50.3 bits (121), Expect = 4e-09
 Identities = 15/68 (22%), Positives = 33/68 (48%), Gaps = 7/68 (10%)

Query: 8   GEPPFFNEPPLQAMRRIR----DMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAEL 63
           G PPF+ +     ++R+         P+ +    +S   +  + ++L   P  R TA + 
Sbjct: 218 GTPPFYGKNEYDILKRVETGKYAFDLPQWRT---ISDDAKDLIRKMLTFHPSLRITATQC 274

Query: 64  LQHPFLRQ 71
           L+HP++++
Sbjct: 275 LEHPWIQK 282

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 50.3 bits (121), Expect = 4e-09
 Identities = 15/70 (21%), Positives = 32/70 (45%), Gaps = 10/70 (14%)

Query: 8   GEPPFFNEPPLQAMRRIRDM-----PPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAE 62
           G  PF      +  ++            +      ++P+    L+++L +DP +R +AA+
Sbjct: 221 GCLPFTGTSLEEVQQKATYKEPNYAVECR-----PLTPQAVDLLKQMLTKDPERRPSAAQ 275

Query: 63  LLQHPFLRQA 72
           +L H + +QA
Sbjct: 276 VLHHEWFKQA 285

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 50.6 bits (121), Expect = 4e-09
 Identities = 15/70 (21%), Positives = 33/70 (47%), Gaps = 2/70 (2%)

Query: 5   MVDGEPPFFNEPPLQA--MRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAE 62
           +  G+ PF ++   ++  +R I  +   K  +   +       + +++  DPL+R TA +
Sbjct: 233 LSKGKHPFGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMK 292

Query: 63  LLQHPFLRQA 72
           +L+HP     
Sbjct: 293 VLRHPLFWPK 302

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 50.6 bits (121), Expect = 4e-09
 Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 7/78 (8%)

Query: 8   GEPPFFNEPPLQAMRRIR----DMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAEL 63
           G  PF  E   + +R ++    +M          +S   + F+ +LL+ DP  R T  + 
Sbjct: 352 GLSPFGGENDDETLRNVKSCDWNMDDSAFSG---ISEDGKDFIRKLLLADPNTRMTIHQA 408

Query: 64  LQHPFLRQAGPPALLVPL 81
           L+HP+L     P     +
Sbjct: 409 LEHPWLTPGNAPGRDSQI 426

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 50.0 bits (120), Expect = 5e-09
 Identities = 10/67 (14%), Positives = 26/67 (38%), Gaps = 2/67 (2%)

Query: 10  PPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFL 69
           P       ++ +  +R++  P L    +  P     ++ +L   P++R  A  ++++   
Sbjct: 226 PFSTQMERVRTLTDVRNLKFPPLFT--QKYPCEYVMVQDMLSPSPMERPEAINIIENAVF 283

Query: 70  RQAGPPA 76
                P 
Sbjct: 284 EDLDFPG 290

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 50.1 bits (120), Expect = 5e-09
 Identities = 15/59 (25%), Positives = 26/59 (44%)

Query: 22  RRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPPALLVP 80
             + D+   K K +   +  +  FL  +L  DP +RA A  L+ HP+L+       +  
Sbjct: 290 WPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLGMEEIRV 348

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 50.3 bits (121), Expect = 5e-09
 Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 7/72 (9%)

Query: 8   GEPPFFNEPPLQAMRRIR----DMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAEL 63
           G  PF  E   Q +  I            K    +S     F++RLLV++   R TA+E 
Sbjct: 199 GINPFLAETNQQIIENIMNAEYTFDEEAFKE---ISIEAMDFVDRLLVKERKSRMTASEA 255

Query: 64  LQHPFLRQAGPP 75
           LQHP+L+Q    
Sbjct: 256 LQHPWLKQKIER 267

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 50.0 bits (120), Expect = 6e-09
 Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 7/73 (9%)

Query: 8   GEPPFFNEPPLQAMRRIR----DMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAEL 63
           G PPF++E   +  ++I+    D P P+      V+P  +  + ++L  +P +R TAAE 
Sbjct: 209 GYPPFWDEDQHRLYQQIKAGAYDFPSPEWDT---VTPEAKDLINKMLTINPSKRITAAEA 265

Query: 64  LQHPFLRQAGPPA 76
           L+HP++      A
Sbjct: 266 LKHPWISHRSTVA 278

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 49.6 bits (119), Expect = 8e-09
 Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 8/78 (10%)

Query: 8   GEPPFFNEPPLQAMRRIR----DMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAEL 63
           G  PF+     +    I      M P +  +   +S   +  + R+L+ DP +R T  E 
Sbjct: 229 GCLPFYGTKE-RLFEGIIKGKYKMNPRQWSH---ISESAKDLVRRMLMLDPAERITVYEA 284

Query: 64  LQHPFLRQAGPPALLVPL 81
           L HP+L++    A  + L
Sbjct: 285 LNHPWLKERDRYAYKIHL 302

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 49.5 bits (119), Expect = 8e-09
 Identities = 16/77 (20%), Positives = 33/77 (42%), Gaps = 13/77 (16%)

Query: 4   EMVDGEPPFFNEPPLQAM-RRIRD----MPPPKLKNTHKVSPRLQGFLERLLVRDPLQRA 58
            ++ G PPF +   ++    ++      MP         +S   +  + +LL R+P  R 
Sbjct: 204 TLLIGRPPF-DTDTVKNTLNKVVLADYEMPS-------FLSIEAKDLIHQLLRRNPADRL 255

Query: 59  TAAELLQHPFLRQAGPP 75
           + + +L HPF+ +    
Sbjct: 256 SLSSVLDHPFMSRNSST 272

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 49.8 bits (119), Expect = 8e-09
 Identities = 16/56 (28%), Positives = 32/56 (57%), Gaps = 1/56 (1%)

Query: 17  PLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQA 72
             + +  I + PPPKL +    S   Q F+ + L+++P +RA   +L+ H F++++
Sbjct: 277 IFELLDYIVNEPPPKLPS-GVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS 331

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 49.5 bits (119), Expect = 9e-09
 Identities = 21/82 (25%), Positives = 33/82 (40%), Gaps = 13/82 (15%)

Query: 4   EMVDGEPPFFNEPPLQAM-RRIRD----MPPPKLKNTHKVSPRLQGFLERLLVRDPLQRA 58
            ++ G+PPF     L+    RI+     +P         ++P     ++++L  DP  R 
Sbjct: 207 TLLVGKPPF-ETSCLKETYLRIKKNEYSIPK-------HINPVAASLIQKMLQTDPTARP 258

Query: 59  TAAELLQHPFLRQAGPPALLVP 80
           T  ELL   F      PA L  
Sbjct: 259 TINELLNDEFFTSGYIPARLPI 280

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 49.3 bits (118), Expect = 1e-08
 Identities = 18/86 (20%), Positives = 31/86 (36%), Gaps = 7/86 (8%)

Query: 8   GEPPFFNEPPLQAMRRIR----DMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAEL 63
           G  PF  +   + +  I     D            S   + F+ +LLV++  +R T  E 
Sbjct: 214 GASPFLGDTKQETLANITAVSYDFDEEFFSQ---TSELAKDFIRKLLVKETRKRLTIQEA 270

Query: 64  LQHPFLRQAGPPALLVPLMKGSRHSN 89
           L+HP++        +V         N
Sbjct: 271 LRHPWITPVDTQQAMVRRESVVNLEN 296

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 49.2 bits (118), Expect = 1e-08
 Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 11/74 (14%)

Query: 8   GEPPFFNEPPLQA----MRRIR----DMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRAT 59
           G PPF++   L        RIR    + P P+      VS  ++  +  LL  +P QR T
Sbjct: 194 GYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE---VSEEVKMLIRNLLKTEPTQRMT 250

Query: 60  AAELLQHPFLRQAG 73
             E + HP++ Q+ 
Sbjct: 251 ITEFMNHPWIMQST 264

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 49.2 bits (118), Expect = 1e-08
 Identities = 18/86 (20%), Positives = 32/86 (37%), Gaps = 7/86 (8%)

Query: 8   GEPPFFNEPPLQAMRRIR----DMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAEL 63
           G  PF  +   + +  I     D       +    S   + F+ +LLV++  +R T  E 
Sbjct: 214 GASPFLGDTKQETLANITSVSYDFDEEFFSH---TSELAKDFIRKLLVKETRKRLTIQEA 270

Query: 64  LQHPFLRQAGPPALLVPLMKGSRHSN 89
           L+HP++        +V         N
Sbjct: 271 LRHPWITPVDNQQAMVRRESVVNLEN 296

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 48.6 bits (116), Expect = 2e-08
 Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 7/68 (10%)

Query: 8   GEPPFFNEPPLQAMRRIR----DMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAEL 63
           G PPF++   +  +R I         P+  +    S  ++  + RLL  DP  R TA + 
Sbjct: 301 GSPPFWHRRQILMLRMIMEGQYQFSSPEWDD---RSSTVKDLISRLLQVDPEARLTAEQA 357

Query: 64  LQHPFLRQ 71
           LQHPF  +
Sbjct: 358 LQHPFFER 365

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 48.4 bits (116), Expect = 2e-08
 Identities = 16/78 (20%), Positives = 31/78 (39%), Gaps = 14/78 (17%)

Query: 8   GEPPFFNEP-------PLQAMRRIR----DMPPPKLKNTHKVSPRLQGFLERLLVRDPLQ 56
           G+ PF +          ++ M++I+           KN   VS   +  ++ LL  DP +
Sbjct: 205 GQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKN---VSQEAKDLIQGLLTVDPNK 261

Query: 57  RATAAELLQHPFLRQAGP 74
           R   + L  + +L+    
Sbjct: 262 RLKMSGLRYNEWLQDGSQ 279

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 47.6 bits (114), Expect = 4e-08
 Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 7/72 (9%)

Query: 8   GEPPFFNEPPLQAMRRIR----DMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAEL 63
           G PPF+ E   +   +I+    +   P   +   +S   + F+  LL +DP +R T  + 
Sbjct: 203 GYPPFYEETESKLFEKIKEGYYEFESPFWDD---ISESAKDFICHLLEKDPNERYTCEKA 259

Query: 64  LQHPFLRQAGPP 75
           L HP++      
Sbjct: 260 LSHPWIDGNTAL 271

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 47.7 bits (114), Expect = 4e-08
 Identities = 21/82 (25%), Positives = 33/82 (40%), Gaps = 13/82 (15%)

Query: 4   EMVDGEPPFFNEPPLQAM-RRIRD----MPPPKLKNTHKVSPRLQGFLERLLVRDPLQRA 58
            ++ G+PPF     L+    RI+     +P         ++P     ++++L  DP  R 
Sbjct: 233 TLLVGKPPF-ETSCLKETYLRIKKNEYSIPK-------HINPVAASLIQKMLQTDPTARP 284

Query: 59  TAAELLQHPFLRQAGPPALLVP 80
           T  ELL   F      PA L  
Sbjct: 285 TINELLNDEFFTSGYIPARLPI 306

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 47.6 bits (114), Expect = 4e-08
 Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 7/70 (10%)

Query: 8   GEPPFFNEPPLQAMRRIR----DMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAEL 63
           G  PF  E   + +  I     D       N    S   + F+ RLLV+DP +R T A+ 
Sbjct: 207 GASPFLGETKQETLTNISAVNYDFDEEYFSN---TSELAKDFIRRLLVKDPKRRMTIAQS 263

Query: 64  LQHPFLRQAG 73
           L+H +++   
Sbjct: 264 LEHSWIKAIR 273

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 47.8 bits (114), Expect = 4e-08
 Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 7/71 (9%)

Query: 8   GEPPFFNEPPLQAMRRIR----DMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAEL 63
           G  PF  E  L+ ++ ++    +       +   VSP  + F++ LL ++P +R T  + 
Sbjct: 246 GLSPFAGEDDLETLQNVKRCDWEFDEDAFSS---VSPEAKDFIKNLLQKEPRKRLTVHDA 302

Query: 64  LQHPFLRQAGP 74
           L+HP+L+    
Sbjct: 303 LEHPWLKGDHS 313

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 47.5 bits (114), Expect = 5e-08
 Identities = 16/70 (22%), Positives = 32/70 (45%), Gaps = 8/70 (11%)

Query: 4   EMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQR-----A 58
           EM+ G  PF++   ++   +I +    +L+     +  ++  L RL+ RD  QR      
Sbjct: 195 EMLAGYTPFYDSNTMKTYEKILN---AELRFPPFFNEDVKDLLSRLITRDLSQRLGNLQN 251

Query: 59  TAAELLQHPF 68
              ++  HP+
Sbjct: 252 GTEDVKNHPW 261

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 47.3 bits (113), Expect = 5e-08
 Identities = 17/83 (20%), Positives = 36/83 (43%), Gaps = 13/83 (15%)

Query: 5   MVDGEPPFFNEPPLQAM-RRIRD----MPPPKLKNTHKVSPRLQGFLERLLVRDPLQRAT 59
           +V G  PF +   L+ +  R+      +P         +S   +  L+R LV +P++R T
Sbjct: 207 LVSGSLPF-DGQNLKELRERVLRGKYRIPF-------YMSTDCENLLKRFLVLNPIKRGT 258

Query: 60  AAELLQHPFLRQAGPPALLVPLM 82
             ++++  ++        L P +
Sbjct: 259 LEQIMKDRWINAGHEEDELKPFV 281

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 47.3 bits (113), Expect = 6e-08
 Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 10/73 (13%)

Query: 8   GEPPFFNEP---PLQAMRRIR----DMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
           G  PF N P   P + + RI      +      +   VS   +  + ++L  DP QR TA
Sbjct: 216 GYTPFANGPDDTPEEILARIGSGKFSLSGGYWNS---VSDTAKDLVSKMLHVDPHQRLTA 272

Query: 61  AELLQHPFLRQAG 73
           A +L+HP++    
Sbjct: 273 ALVLRHPWIVHWD 285

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 47.3 bits (113), Expect = 6e-08
 Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 11/74 (14%)

Query: 8   GEPPFFNEPPLQA----MRRIR----DMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRAT 59
           G PPF++           RRIR      P P+      VS   +  +  LL  DP +R T
Sbjct: 225 GFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSE---VSEDAKQLIRLLLKTDPTERLT 281

Query: 60  AAELLQHPFLRQAG 73
             + + HP++ Q+ 
Sbjct: 282 ITQFMNHPWINQSM 295

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 47.4 bits (112), Expect = 6e-08
 Identities = 9/68 (13%), Positives = 21/68 (30%), Gaps = 7/68 (10%)

Query: 4   EMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAEL 63
            +   + P  ++  L     I        ++   +   ++  LE  L      R    + 
Sbjct: 309 WIWCADLPNTDDAALGGSEWI-------FRSCKNIPQPVRALLEGFLRYPKEDRLLPLQA 361

Query: 64  LQHPFLRQ 71
           ++ P   Q
Sbjct: 362 METPEYEQ 369

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 47.1 bits (112), Expect = 8e-08
 Identities = 18/84 (21%), Positives = 30/84 (35%), Gaps = 12/84 (14%)

Query: 4   EMVDGEPPFFNEPPLQAMRRI--RDMPPPKLKNTHKVSPRLQGFLERLLVRDP--LQRAT 59
           EM+ GE PF+ E  ++   +I               VS   +  + RL+      L +  
Sbjct: 273 EMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVSENAKDLIRRLICSREHRLGQNG 332

Query: 60  AAELLQHPF--------LRQAGPP 75
             +  +HPF        +R    P
Sbjct: 333 IEDFKKHPFFSGIDWDNIRNCEAP 356

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 46.9 bits (112), Expect = 9e-08
 Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 2/64 (3%)

Query: 4   EMVDGEPPFFNEPPLQ-AMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQR-ATAA 61
           E++ GEPPF  + P+  A + +R+ P P       +S  L   + + L ++P  R  TAA
Sbjct: 211 EVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAA 270

Query: 62  ELLQ 65
           E+  
Sbjct: 271 EMRA 274

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 46.8 bits (111), Expect = 9e-08
 Identities = 8/50 (16%), Positives = 22/50 (44%), Gaps = 2/50 (4%)

Query: 21  MRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLR 70
           +  +R++  P L       P+    ++ +L   P +R  A +++++    
Sbjct: 283 ITDVRNLKFPLLFTQK--YPQEHMMVQDMLSPSPTERPEATDIIENAIFE 330

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 46.6 bits (111), Expect = 1e-07
 Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 11/74 (14%)

Query: 8   GEPPFFNEPPLQA----MRRIR----DMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRAT 59
           G PPF++   L        RIR    + P P+      VS  ++  +  LL  +P QR T
Sbjct: 259 GYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE---VSEEVKMLIRNLLKTEPTQRMT 315

Query: 60  AAELLQHPFLRQAG 73
             E + HP++ Q+ 
Sbjct: 316 ITEFMNHPWIMQST 329

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 46.5 bits (111), Expect = 1e-07
 Identities = 11/71 (15%), Positives = 28/71 (39%), Gaps = 7/71 (9%)

Query: 4   EMVDGEPPFF---NEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQR-AT 59
           E++ G  P+    +    + +          +      S  +   L++LL  +P QR + 
Sbjct: 209 ELLRGRRPYHIRSSTSSKEIVHTFETT---VVTYPSAWSQEMVSLLKKLLEPNPDQRFSQ 265

Query: 60  AAELLQHPFLR 70
            +++   P++ 
Sbjct: 266 LSDVQNFPYMN 276

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score = 46.3 bits (110), Expect = 1e-07
 Identities = 13/30 (43%), Positives = 19/30 (63%)

Query: 45  FLERLLVRDPLQRATAAELLQHPFLRQAGP 74
           FL++ L  DP  R T  + L+HP+LR+  P
Sbjct: 388 FLKQCLEWDPAVRMTPGQALRHPWLRRRLP 417

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 46.1 bits (110), Expect = 1e-07
 Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 8/70 (11%)

Query: 4   EMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQR-----A 58
           EM  G PPFF + P+Q   +I      K++     S  L+  L  LL  D  +R      
Sbjct: 230 EMAAGYPPFFADQPIQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKN 286

Query: 59  TAAELLQHPF 68
              ++  H +
Sbjct: 287 GVNDIKNHKW 296

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 46.0 bits (110), Expect = 2e-07
 Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 14/75 (18%)

Query: 4   EMVDGEPPFFNEPPLQAMRRIRDMP---PPKLKNTHKVSPRLQGFLERLLVRDPLQR--- 57
           +M+ G PPF  E   + + +I       PP L      +   +  L++LL R+   R   
Sbjct: 213 DMLTGAPPFTGENRKKTIDKILKCKLNLPPYL------TQEARDLLKKLLKRNAASRLGA 266

Query: 58  --ATAAELLQHPFLR 70
               A E+  HPF R
Sbjct: 267 GPGDAGEVQAHPFFR 281

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 45.6 bits (109), Expect = 2e-07
 Identities = 18/72 (25%), Positives = 26/72 (36%), Gaps = 8/72 (11%)

Query: 4   EMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQR-----A 58
           EM+ G  PF  +   + M  I       +     +SP  Q  L  L  R+P  R      
Sbjct: 218 EMLTGTLPFQGKDRKETMTMIL-KAKLGMPQF--LSPEAQSLLRMLFKRNPANRLGAGPD 274

Query: 59  TAAELLQHPFLR 70
              E+ +H F  
Sbjct: 275 GVEEIKRHSFFS 286

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 45.6 bits (108), Expect = 2e-07
 Identities = 19/73 (26%), Positives = 29/73 (39%), Gaps = 11/73 (15%)

Query: 4   EMVDGEPPFFNEPPL---QAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQR--- 57
           +++ G  PF         +  R    M    ++     SP L+  LE LL RD  +R   
Sbjct: 383 KLLRGHSPFRQHKTKDKHEIDRMTLTMA---VELPDSFSPELRSLLEGLLQRDVNRRLGC 439

Query: 58  --ATAAELLQHPF 68
               A E+ + PF
Sbjct: 440 LGRGAQEVKESPF 452

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 45.7 bits (109), Expect = 2e-07
 Identities = 17/73 (23%), Positives = 28/73 (38%), Gaps = 11/73 (15%)

Query: 4   EMVDGEPPFFNEPPLQAMRRIRDMPP--PKLKNTHKVSPRLQGFLERLLVRDPLQR---- 57
           EM+ G PPF++    +    I + P           ++   +  LE LL +D  +R    
Sbjct: 231 EMLYGLPPFYSRNTAEMYDNILNKPLQLKP-----NITNSARHLLEGLLQKDRTKRLGAK 285

Query: 58  ATAAELLQHPFLR 70
               E+  H F  
Sbjct: 286 DDFMEIKSHVFFS 298

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 45.3 bits (108), Expect = 2e-07
 Identities = 18/73 (24%), Positives = 29/73 (39%), Gaps = 9/73 (12%)

Query: 4   EMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQR------ 57
           ++V G PPF         ++I  +   +     K  P+ +  +E+LLV D  +R      
Sbjct: 224 QLVAGLPPFRAGNEYLIFQKIIKL---EYDFPEKFFPKARDLVEKLLVLDATKRLGCEEM 280

Query: 58  ATAAELLQHPFLR 70
                L  HPF  
Sbjct: 281 EGYGPLKAHPFFE 293

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score = 45.5 bits (108), Expect = 3e-07
 Identities = 9/30 (30%), Positives = 13/30 (43%)

Query: 45  FLERLLVRDPLQRATAAELLQHPFLRQAGP 74
            + R+L  DP  R      LQH F ++   
Sbjct: 352 LILRMLDYDPKTRIQPYYALQHSFFKKTAD 381

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 45.3 bits (108), Expect = 3e-07
 Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 8/72 (11%)

Query: 4   EMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQR-----A 58
           EM+ G  PF+N+   +    I       ++    +SP  +  L  LL +DP QR     +
Sbjct: 197 EMMCGRLPFYNQDHERLFELILMEE---IRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPS 253

Query: 59  TAAELLQHPFLR 70
            A E+++H F  
Sbjct: 254 DAKEVMEHRFFL 265

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 45.0 bits (107), Expect = 3e-07
 Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 8/72 (11%)

Query: 8   GEPPFFNEPPLQAM-RRIR----DMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAE 62
           G  PF++E   Q M RRI         P       VS   +  + +L+V DP +R T  +
Sbjct: 246 GFEPFYDERGDQFMFRRILNCEYYFISPWWDE---VSLNAKDLVRKLIVLDPKKRLTTFQ 302

Query: 63  LLQHPFLRQAGP 74
            LQHP++     
Sbjct: 303 ALQHPWVTGKAA 314

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 45.1 bits (107), Expect = 3e-07
 Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 8/72 (11%)

Query: 4   EMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQR-----A 58
           EM+ G  PF+N+   +    I       ++    + P  +  L  LL +DP QR      
Sbjct: 341 EMMCGRLPFYNQDHEKLFELILMEE---IRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSE 397

Query: 59  TAAELLQHPFLR 70
            A E++QH F  
Sbjct: 398 DAKEIMQHRFFA 409

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 45.2 bits (107), Expect = 3e-07
 Identities = 19/76 (25%), Positives = 28/76 (36%), Gaps = 12/76 (15%)

Query: 4   EMVDGEPPFFNEPPLQAM----RRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQR-- 57
           EM+    PF             +R+ +     +    K SP  + F E LL +DP +R  
Sbjct: 381 EMIAARGPFRARGEKVENKELKQRVLEQA---VTYPDKFSPASKDFCEALLQKDPEKRLG 437

Query: 58  ---ATAAELLQHPFLR 70
               +   L  HP  R
Sbjct: 438 FRDGSCDGLRTHPLFR 453

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score = 44.9 bits (106), Expect = 4e-07
 Identities = 17/57 (29%), Positives = 23/57 (40%), Gaps = 8/57 (14%)

Query: 22  RRIRDMPPPKLKNTHKVSPRLQG--------FLERLLVRDPLQRATAAELLQHPFLR 70
           + I  + P  L                    FL  +L   P +RATAAE L+HP+L 
Sbjct: 340 KHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLN 396

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 45.0 bits (107), Expect = 4e-07
 Identities = 18/76 (23%), Positives = 28/76 (36%), Gaps = 9/76 (11%)

Query: 5   MVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELL 64
           MV G+ PF  +   + +      P         VSP     + R L   P  R +  E+L
Sbjct: 232 MVCGDIPFERD--QEILEAELHFPA-------HVSPDCCALIRRCLAPKPSSRPSLEEIL 282

Query: 65  QHPFLRQAGPPALLVP 80
             P+++       L P
Sbjct: 283 LDPWMQTPAEDVPLNP 298

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 45.0 bits (107), Expect = 4e-07
 Identities = 21/86 (24%), Positives = 34/86 (39%), Gaps = 22/86 (25%)

Query: 8   GEPPFFNEPPLQA---------------MRRIR----DMPPPKLKNTHKVSPRLQGFLER 48
           G PPF                          I+    + P     +   +S   +  + +
Sbjct: 222 GYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAH---ISCAAKDLISK 278

Query: 49  LLVRDPLQRATAAELLQHPFLRQAGP 74
           LLVRD  QR +AA++LQHP+++   P
Sbjct: 279 LLVRDAKQRLSAAQVLQHPWVQGCAP 304

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 44.8 bits (106), Expect = 4e-07
 Identities = 18/76 (23%), Positives = 36/76 (47%), Gaps = 12/76 (15%)

Query: 4   EMVDGEPPFFNEPPLQAM----RRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQR-- 57
           EM+ G+ PF             R ++++P    + + + SP+ +    +LL +DP +R  
Sbjct: 377 EMIAGQSPFQQRKKKIKREEVERLVKEVP---EEYSERFSPQARSLCSQLLCKDPAERLG 433

Query: 58  ---ATAAELLQHPFLR 70
               +A E+ +HP  +
Sbjct: 434 CRGGSAREVKEHPLFK 449

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 44.5 bits (106), Expect = 5e-07
 Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 8/70 (11%)

Query: 4   EMVDGEPPFFNEPPLQAMRRIRDMPP--PKLKNTHKVSPRLQGFLERLLVRDPLQR-ATA 60
           EM+ G+ PF  +   +    IR   P  P+      +    +  L +L VR+P +R    
Sbjct: 210 EMLIGQSPFHGQDEEELFHSIRMDNPFYPR-----WLEKEAKDLLVKLFVREPEKRLGVR 264

Query: 61  AELLQHPFLR 70
            ++ QHP  R
Sbjct: 265 GDIRQHPLFR 274

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 44.3 bits (105), Expect = 7e-07
 Identities = 18/75 (24%), Positives = 28/75 (37%), Gaps = 6/75 (8%)

Query: 4   EMVDGEPPF---FNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
            M+ GE P+   F +    A+     +  P+   + + S  L   L  ++  DP QR   
Sbjct: 238 AMMFGEGPYDMVFQKGDSVALAVQNQLSIPQ---SPRHSSALWQLLNSMMTVDPHQRPHI 294

Query: 61  AELLQHPFLRQAGPP 75
             LL      Q   P
Sbjct: 295 PLLLSQLEALQPPAP 309

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 44.3 bits (105), Expect = 7e-07
 Identities = 17/77 (22%), Positives = 29/77 (37%), Gaps = 9/77 (11%)

Query: 5   MVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELL 64
           MV G+ PF ++   + +R              +VS   Q  +   L   P  R T  E+ 
Sbjct: 242 MVCGDIPFEHD--EEIIRGQVFFRQ-------RVSSECQHLIRWCLALRPSDRPTFEEIQ 292

Query: 65  QHPFLRQAGPPALLVPL 81
            HP+++    P     +
Sbjct: 293 NHPWMQDVLLPQETAEI 309

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 44.0 bits (104), Expect = 8e-07
 Identities = 13/90 (14%), Positives = 31/90 (34%), Gaps = 9/90 (10%)

Query: 4   EMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAEL 63
            +   + PF +   L+ +     +PP                +  +L  +P +R + AE+
Sbjct: 245 LLCFRQHPFEDGAKLRIVNGKYSIPPH-----DTQYTVFHSLIRAMLQVNPEERLSIAEV 299

Query: 64  LQHPF----LRQAGPPALLVPLMKGSRHSN 89
           +         R   P + +  L++ +    
Sbjct: 300 VHQLQEIAAARNVNPKSPITELLEQNGGYG 329

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score = 43.9 bits (104), Expect = 8e-07
 Identities = 17/56 (30%), Positives = 22/56 (39%), Gaps = 2/56 (3%)

Query: 22  RRIRDMPPPK--LKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPP 75
               +  P K  +        +L   + R+L  DP QR T AE L HPF     P 
Sbjct: 288 YVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGLTPE 343

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 43.9 bits (104), Expect = 9e-07
 Identities = 21/85 (24%), Positives = 31/85 (36%), Gaps = 14/85 (16%)

Query: 4   EMVDGEPPFFNEPPLQAMRRI--RDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQR---A 58
           EM  G+ PF+ +   +   +I               V    + F++RLL   P  R    
Sbjct: 262 EMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLL-CPPETRLGRG 320

Query: 59  TAAELLQHPF--------LRQAGPP 75
            A +   HPF        LR + PP
Sbjct: 321 GAGDFRTHPFFFGLDWDGLRDSVPP 345

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 43.8 bits (104), Expect = 9e-07
 Identities = 12/43 (27%), Positives = 21/43 (48%)

Query: 38  VSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPPALLVP 80
             P L   L+ +L  +P +R +  ++ QH + R+  PPA    
Sbjct: 236 CGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHPPAEAPV 278

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 43.8 bits (104), Expect = 1e-06
 Identities = 15/75 (20%), Positives = 28/75 (37%), Gaps = 14/75 (18%)

Query: 4   EMVDGEPPFFNEPPLQAMRRIRDMP---PPKLKNTHKVSPRLQGFLERLLVRDPLQR--- 57
           EM+ G+ PF  E   +  + I +     P  +      S       + L+ + P +R   
Sbjct: 213 EMLAGQAPFEGEDEDELFQSIMEHNVAYPKSM------SKEAVAICKGLMTKHPGKRLGC 266

Query: 58  --ATAAELLQHPFLR 70
                 ++ +H F R
Sbjct: 267 GPEGERDIKEHAFFR 281

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 43.4 bits (103), Expect = 1e-06
 Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 3/65 (4%)

Query: 4   EMVDGEPPFFNEPPLQ-AMRRIR-DMPPPKLKNTHKVSPRLQGFLERLLVRDPLQR-ATA 60
           EM+ GEPPF  E  +  A++ I+  +P         +   L   + R   +D   R  T 
Sbjct: 204 EMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLSNVILRATEKDKANRYKTI 263

Query: 61  AELLQ 65
            E+  
Sbjct: 264 QEMKD 268

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 43.0 bits (102), Expect = 2e-06
 Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 16/78 (20%)

Query: 4   EMVDGEPPFFNEP----PLQAMRRIRDMPP--PKLKNTHKVSPRLQGFLERLLVRDPLQR 57
           E++ G  PF  +       +  RRI    P  P+     ++S   +  ++RLL++DP +R
Sbjct: 254 ELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQ-----EMSALAKDLIQRLLMKDPKKR 308

Query: 58  -----ATAAELLQHPFLR 70
                  A E+ +H F +
Sbjct: 309 LGCGPRDADEIKEHLFFQ 326

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 43.0 bits (102), Expect = 2e-06
 Identities = 18/75 (24%), Positives = 32/75 (42%), Gaps = 2/75 (2%)

Query: 11  PFFNEPPLQAMRRIRDMPPPKLKNTH--KVSPRLQGFLERLLVRDPLQRATAAELLQHPF 68
             FN+ P+ A  R+ ++   +       K+S  +    ++ L  DP +R   AELL H F
Sbjct: 250 ELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDF 309

Query: 69  LRQAGPPALLVPLMK 83
            +  G        ++
Sbjct: 310 FQMDGFAERFSQELQ 324

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score = 43.1 bits (102), Expect = 2e-06
 Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 3/53 (5%)

Query: 17  PLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFL 69
            + +++ ++   P      H++      FL  +L  DP  R + AELL+H FL
Sbjct: 310 SINSIKHVKKCLPLYKIIKHEL---FCDFLYSILQIDPTLRPSPAELLKHKFL 359

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 43.1 bits (101), Expect = 2e-06
 Identities = 14/72 (19%), Positives = 28/72 (38%), Gaps = 8/72 (11%)

Query: 4   EMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQR-----A 58
           EM+ G+ PF  E   +  + I +     +     +S       + L+ + P +R      
Sbjct: 534 EMLAGQAPFEGEDEDELFQSIMEHN---VAYPKSMSKEAVAICKGLMTKHPGKRLGCGPE 590

Query: 59  TAAELLQHPFLR 70
              ++ +H F R
Sbjct: 591 GERDIKEHAFFR 602

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 42.8 bits (101), Expect = 2e-06
 Identities = 16/72 (22%), Positives = 27/72 (37%), Gaps = 9/72 (12%)

Query: 5   MVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELL 64
           +V  E PF        +    +     +   + VS  L   +  LL   P +R T  +L+
Sbjct: 223 LVFEENPFCE------LEETVE---AAIHPPYLVSKELMSLVSGLLQPVPERRTTLEKLV 273

Query: 65  QHPFLRQAGPPA 76
             P++ Q    A
Sbjct: 274 TDPWVTQPVNLA 285

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 42.6 bits (101), Expect = 2e-06
 Identities = 15/73 (20%), Positives = 26/73 (35%), Gaps = 9/73 (12%)

Query: 4   EMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQR------ 57
           EM+ G  PF  E        I +     +     +     G L+  + ++P  R      
Sbjct: 216 EMLCGHAPFEAENEDDLFEAILNDE---VVYPTWLHEDATGILKSFMTKNPTMRLGSLTQ 272

Query: 58  ATAAELLQHPFLR 70
                +L+HPF +
Sbjct: 273 GGEHAILRHPFFK 285

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 42.3 bits (100), Expect = 3e-06
 Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 13/78 (16%)

Query: 5   MVDGEPPFFNEPPLQAM-RRIRD----MPPPKLKNTHKVSPRLQGFLERLLVRDPLQRAT 59
           M+ G  PF ++  +  + +++      MP         +SP  Q  + R++V DP+QR T
Sbjct: 201 MLVGRLPF-DDEFIPNLFKKVNSCVYVMPD-------FLSPGAQSLIRRMIVADPMQRIT 252

Query: 60  AAELLQHPFLRQAGPPAL 77
             E+ + P+     P  L
Sbjct: 253 IQEIRRDPWFNVNLPDYL 270

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 42.5 bits (100), Expect = 3e-06
 Identities = 12/43 (27%), Positives = 24/43 (55%)

Query: 38  VSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPPALLVP 80
           ++P +   L+ +L  DP++RAT  ++ +H + +Q  P  L   
Sbjct: 239 LNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQDLPKYLFPE 281

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 42.2 bits (100), Expect = 3e-06
 Identities = 12/41 (29%), Positives = 22/41 (53%)

Query: 38  VSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPPALL 78
           ++  +   L  +L  DPL+RAT  ++ +H + +Q  P  L 
Sbjct: 234 LNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQDLPSYLF 274

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score = 41.9 bits (99), Expect = 4e-06
 Identities = 16/61 (26%), Positives = 26/61 (42%), Gaps = 2/61 (3%)

Query: 13  FNEPPLQAMRRIRDMPPPK--LKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLR 70
           ++E         R   P K  + +      RL   ++++L  DP +R T  E L+HPF  
Sbjct: 274 WDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFD 333

Query: 71  Q 71
            
Sbjct: 334 L 334

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 41.9 bits (99), Expect = 5e-06
 Identities = 13/68 (19%), Positives = 32/68 (47%), Gaps = 3/68 (4%)

Query: 5   MVDGEPPFFNEPPLQAM-RRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAEL 63
            V G+ PF  +  +  +  +I+     +  +   ++  L+  + R+L ++P  R    E+
Sbjct: 233 FVFGQCPF-MDERIMCLHSKIKSQAL-EFPDQPDIAEDLKDLITRMLDKNPESRIVVPEI 290

Query: 64  LQHPFLRQ 71
             HP++ +
Sbjct: 291 KLHPWVTR 298

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 41.8 bits (99), Expect = 5e-06
 Identities = 16/81 (19%), Positives = 26/81 (32%), Gaps = 2/81 (2%)

Query: 11  PFFNEPPLQAMRRIRDMPPPKLKNTH--KVSPRLQGFLERLLVRDPLQRATAAELLQHPF 68
             F+     +  +I D    +        +S    G L+  L  DP +R T  +LL HP+
Sbjct: 228 QVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPY 287

Query: 69  LRQAGPPALLVPLMKGSRHSN 89
                    L         + 
Sbjct: 288 FENIREIEDLAKEHDKPAENL 308

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 41.5 bits (98), Expect = 6e-06
 Identities = 16/36 (44%), Positives = 21/36 (58%)

Query: 34  NTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFL 69
           N H VSP    FL++LL  D   R TA E ++HP+ 
Sbjct: 288 NQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 323

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 41.6 bits (98), Expect = 6e-06
 Identities = 13/69 (18%), Positives = 27/69 (39%), Gaps = 5/69 (7%)

Query: 4   EMVDGEPPFFNEPPLQAMRRIRDMPPP-KLKNTHKVSPRLQGFLERLLVRDPLQR---AT 59
           EM+ G+ PF+ +  +    +I +        + + +S   +  +   L  D   R     
Sbjct: 265 EMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFL-TDREVRLGRNG 323

Query: 60  AAELLQHPF 68
             E+ +H F
Sbjct: 324 VEEIKRHLF 332

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 41.5 bits (98), Expect = 6e-06
 Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 4/57 (7%)

Query: 19  QAMRRIRDMPPPKLKNTHKV----SPRLQGFLERLLVRDPLQRATAAELLQHPFLRQ 71
            A   I+ +P    K+  ++    SP+    LE++L  D  +R TAA+ L HPF   
Sbjct: 255 AAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEP 311

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 41.5 bits (98), Expect = 6e-06
 Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 4/57 (7%)

Query: 19  QAMRRIRDMPPPKLKNTHKV----SPRLQGFLERLLVRDPLQRATAAELLQHPFLRQ 71
           +A   I+ +P        K+    +P+    L+R+LV DP +R TA E L+HP+L+ 
Sbjct: 255 RAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQT 311

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 41.5 bits (98), Expect = 6e-06
 Identities = 11/63 (17%), Positives = 20/63 (31%), Gaps = 1/63 (1%)

Query: 4   EMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQR-ATAAE 62
           E + G PP+  +        I    P        +       + R + ++P  R  T  +
Sbjct: 227 ECLTGSPPYQGDQLSVMGAHINQAIPRPSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGD 286

Query: 63  LLQ 65
           L  
Sbjct: 287 LSA 289

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 41.2 bits (97), Expect = 7e-06
 Identities = 11/43 (25%), Positives = 19/43 (44%)

Query: 38  VSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPPALLVP 80
           +SP     + R+ V DP  R +  E+  H +  +  P  L+  
Sbjct: 247 ISPECCHLISRIFVADPATRISIPEIKTHSWFLKNLPADLMNE 289

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 41.5 bits (98), Expect = 7e-06
 Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 4/57 (7%)

Query: 19  QAMRRIRDMPPPKLKNTHKV----SPRLQGFLERLLVRDPLQRATAAELLQHPFLRQ 71
           +A   ++ +P  + K+   +    SP     LE++LV D  QR TA E L HP+   
Sbjct: 257 EAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFES 313

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 41.0 bits (97), Expect = 7e-06
 Identities = 14/81 (17%), Positives = 27/81 (33%), Gaps = 10/81 (12%)

Query: 5   MVDGEPPFFNEPPLQAM-----RRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRAT 59
           M+ GE P+               +   + P K     K+       L ++LV +P  R T
Sbjct: 201 MLAGELPWDQPSDSCQEYSDWKEKKTYLNPWK-----KIDSAPLALLHKILVENPSARIT 255

Query: 60  AAELLQHPFLRQAGPPALLVP 80
             ++ +  +  +        P
Sbjct: 256 IPDIKKDRWYNKPLKKGAKRP 276

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 41.2 bits (97), Expect = 8e-06
 Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 4/57 (7%)

Query: 19  QAMRRIRDMPPPKLKNTHKV----SPRLQGFLERLLVRDPLQRATAAELLQHPFLRQ 71
            A   I+ +      N   V    +P     LE++LV D  +R TAA+ L H +  Q
Sbjct: 261 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 317

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 41.3 bits (97), Expect = 8e-06
 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 4/57 (7%)

Query: 19  QAMRRIRDMPPPKLKNTHKVSPRLQG----FLERLLVRDPLQRATAAELLQHPFLRQ 71
            A R IR  P  +  +  +  P         L+R+LV +P +R T  E L HPF ++
Sbjct: 346 DAKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKE 402

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 41.1 bits (97), Expect = 8e-06
 Identities = 8/45 (17%), Positives = 17/45 (37%)

Query: 36  HKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPPALLVP 80
            K+       L ++LV +P  R T  ++ +  +  +        P
Sbjct: 232 KKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPLKKGAKRP 276

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 41.1 bits (97), Expect = 9e-06
 Identities = 9/58 (15%), Positives = 20/58 (34%), Gaps = 5/58 (8%)

Query: 19  QAMRRIRDMPPPKLKNT-----HKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQ 71
            A   +R+                  P     + ++L  +P +R +  + L+HP+   
Sbjct: 265 SARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFES 322

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 40.9 bits (96), Expect = 9e-06
 Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 1/52 (1%)

Query: 21  MRRIRDMPPPKLKNT-HKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQ 71
           ++      P  LK     +S      LE +L  +P +R T  + L HP+L+ 
Sbjct: 316 IKLFPHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKD 367

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 41.1 bits (97), Expect = 9e-06
 Identities = 12/57 (21%), Positives = 25/57 (43%), Gaps = 4/57 (7%)

Query: 19  QAMRRIRDMPPPKLKNTHKVSPRLQG----FLERLLVRDPLQRATAAELLQHPFLRQ 71
           +A   +  +P       +++ P         L+++L  +P +R    + L HP+L Q
Sbjct: 263 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 40.3 bits (95), Expect = 1e-05
 Identities = 18/88 (20%), Positives = 30/88 (34%), Gaps = 6/88 (6%)

Query: 2   VVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAA 61
           V ++    P     PP    + ++      L         L  FL  LL  +P  R +A 
Sbjct: 236 VTKLPKYNPNIQQRPPRDLRQVLQPHTKEPL------DGNLMDFLHGLLQLNPDMRLSAK 289

Query: 62  ELLQHPFLRQAGPPALLVPLMKGSRHSN 89
           + L HP+  +    A +        H +
Sbjct: 290 QALHHPWFAEYYHHASMGGSRSHHHHHH 317

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 40.3 bits (95), Expect = 1e-05
 Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 4/57 (7%)

Query: 19  QAMRRIRDMPPPKLKNTHKVSPRLQG----FLERLLVRDPLQRATAAELLQHPFLRQ 71
                IR+      K   ++ P +      FLE++L   P+ R TA E L HP++  
Sbjct: 255 VIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMSI 311

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 12/55 (21%), Positives = 20/55 (36%), Gaps = 1/55 (1%)

Query: 28  PPPKLKNT-HKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPPALLVPL 81
                      +    +  L ++L  DP +R +A   L HPF +    P   + L
Sbjct: 245 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLRL 299

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 39.5 bits (93), Expect = 3e-05
 Identities = 15/69 (21%), Positives = 31/69 (44%), Gaps = 5/69 (7%)

Query: 15  EPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGP 74
           E      R+++D     +++ + +       +++LLV DP QR  + + L H F      
Sbjct: 266 ELVKGQKRKVKDRLKAYVRDPYALD-----LIDKLLVLDPAQRIDSDDALNHDFFWSDPM 320

Query: 75  PALLVPLMK 83
           P+ L  ++ 
Sbjct: 321 PSDLKGMLS 329

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 39.0 bits (91), Expect = 4e-05
 Identities = 17/68 (25%), Positives = 28/68 (41%), Gaps = 2/68 (2%)

Query: 10  PPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGF--LERLLVRDPLQRATAAELLQHP 67
           P               +    K    HKV P  + F  L++LL  DP++R T+ + +Q P
Sbjct: 276 PEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDP 335

Query: 68  FLRQAGPP 75
           +  +   P
Sbjct: 336 YFLEDPLP 343

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 38.8 bits (91), Expect = 6e-05
 Identities = 12/60 (20%), Positives = 19/60 (31%), Gaps = 5/60 (8%)

Query: 17  PLQAMRRIRDMPPPKLKN-----THKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQ 71
           P      + +       N     + K +      L  LL   P +R    E L HP+  +
Sbjct: 261 PSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDE 320

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 38.5 bits (90), Expect = 7e-05
 Identities = 11/45 (24%), Positives = 23/45 (51%)

Query: 27  MPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQ 71
           + P   ++    + + +  L ++LV D  +R +  E LQHP++  
Sbjct: 280 LFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINV 324

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 38.7 bits (91), Expect = 7e-05
 Identities = 9/49 (18%), Positives = 17/49 (34%), Gaps = 1/49 (2%)

Query: 28  PPPKLKNT-HKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPP 75
                 +            L  +L  DP +R +A + + HP+ +   P 
Sbjct: 262 EKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDLDPQ 310

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 38.3 bits (90), Expect = 8e-05
 Identities = 10/60 (16%), Positives = 19/60 (31%), Gaps = 4/60 (6%)

Query: 27  MPPPKLKNTHKVSPRL--QGF--LERLLVRDPLQRATAAELLQHPFLRQAGPPALLVPLM 82
                 +   K    +   G   L + L  +P +R +A   L HP+ +        +   
Sbjct: 254 FHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLERCKENLDSH 313

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 38.4 bits (90), Expect = 9e-05
 Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 4/57 (7%)

Query: 28  PPPKLKNTHKVSPRL--QGF--LERLLVRDPLQRATAAELLQHPFLRQAGPPALLVP 80
           P  + +     +PRL   G   L +LL  +   R +A + ++HPF    G     +P
Sbjct: 240 PKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGERIHKLP 296

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 38.3 bits (90), Expect = 9e-05
 Identities = 14/30 (46%), Positives = 19/30 (63%)

Query: 46  LERLLVRDPLQRATAAELLQHPFLRQAGPP 75
           L+ LL  +P+QR +A E LQHP+     PP
Sbjct: 263 LQNLLKCNPVQRISAEEALQHPYFSDFCPP 292

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 37.9 bits (89), Expect = 1e-04
 Identities = 14/52 (26%), Positives = 22/52 (42%), Gaps = 4/52 (7%)

Query: 28  PPPKLKNTHKVSPRL--QGF--LERLLVRDPLQRATAAELLQHPFLRQAGPP 75
           PP   +    V P +   G   L  +L  +P +R +A   LQH +L +    
Sbjct: 255 PPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDEGN 306

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 37.7 bits (88), Expect = 1e-04
 Identities = 18/84 (21%), Positives = 29/84 (34%), Gaps = 22/84 (26%)

Query: 4   EMVDGEPPFFNEPPLQAM---------RRIRDMPP--PKLKNTHKVSPRLQGFLERLLVR 52
           EM+ G  PF                  + I +     P+      +S +    L+  L +
Sbjct: 245 EMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR-----SLSVKAASVLKSFLNK 299

Query: 53  DPLQR------ATAAELLQHPFLR 70
           DP +R         A++  HPF R
Sbjct: 300 DPKERLGCHPQTGFADIQGHPFFR 323

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 37.9 bits (88), Expect = 1e-04
 Identities = 10/27 (37%), Positives = 17/27 (62%)

Query: 45  FLERLLVRDPLQRATAAELLQHPFLRQ 71
            L ++LV DP +R +  + LQHP++  
Sbjct: 335 LLSKMLVIDPAKRISVDDALQHPYINV 361

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 37.6 bits (88), Expect = 1e-04
 Identities = 18/84 (21%), Positives = 29/84 (34%), Gaps = 22/84 (26%)

Query: 4   EMVDGEPPFFNEPPLQAM---------RRIRDMPP--PKLKNTHKVSPRLQGFLERLLVR 52
           EM+ G  PF                  + I +     P+      +S +    L+  L +
Sbjct: 202 EMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR-----SLSVKAASVLKSFLNK 256

Query: 53  DPLQR------ATAAELLQHPFLR 70
           DP +R         A++  HPF R
Sbjct: 257 DPKERLGCHPQTGFADIQGHPFFR 280

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 37.6 bits (88), Expect = 1e-04
 Identities = 12/66 (18%), Positives = 23/66 (34%), Gaps = 6/66 (9%)

Query: 10  PPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFL 69
           P +    P    + ++ +    L             L  +L  DP++R +A   L+HP+ 
Sbjct: 269 PDWKQSFPKFRGKTLKRVLGALL------DDEGLDLLTAMLEMDPVKRISAKNALEHPYF 322

Query: 70  RQAGPP 75
                 
Sbjct: 323 SHNDFD 328

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 37.2 bits (87), Expect = 2e-04
 Identities = 10/50 (20%), Positives = 18/50 (36%), Gaps = 1/50 (2%)

Query: 28  PPPKLKNT-HKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPPA 76
           P   L +        L   ++ L + +P  R TA + L+  +      P 
Sbjct: 253 PGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPT 302

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 37.1 bits (87), Expect = 2e-04
 Identities = 11/45 (24%), Positives = 21/45 (46%), Gaps = 1/45 (2%)

Query: 28  PPPKLKNT-HKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQ 71
            P   ++    +       L ++L  DP QR TA + L+H + ++
Sbjct: 242 EPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 36.6 bits (85), Expect = 3e-04
 Identities = 10/27 (37%), Positives = 18/27 (66%)

Query: 45  FLERLLVRDPLQRATAAELLQHPFLRQ 71
            L++LL  +P +R +A + L+HPF+  
Sbjct: 308 LLDKLLQFNPNKRISANDALKHPFVSI 334

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 36.6 bits (85), Expect = 3e-04
 Identities = 9/25 (36%), Positives = 9/25 (36%)

Query: 45  FLERLLVRDPLQRATAAELLQHPFL 69
              RLL   P  R T  E   H F 
Sbjct: 316 LCSRLLEYTPTARLTPLEACAHSFF 340

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 36.5 bits (85), Expect = 3e-04
 Identities = 13/36 (36%), Positives = 16/36 (44%)

Query: 45  FLERLLVRDPLQRATAAELLQHPFLRQAGPPALLVP 80
            + RLL   P  R TA E L HPF  +       +P
Sbjct: 301 LISRLLEYTPSARLTAIEALCHPFFDELRTGEARMP 336

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 36.6 bits (85), Expect = 4e-04
 Identities = 9/25 (36%), Positives = 13/25 (52%)

Query: 45  FLERLLVRDPLQRATAAELLQHPFL 69
            LE++L  +P  R    E + HPF 
Sbjct: 301 LLEQILRYEPDLRINPYEAMAHPFF 325

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 35.8 bits (82), Expect = 6e-04
 Identities = 15/75 (20%), Positives = 24/75 (32%), Gaps = 9/75 (12%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERL----LVRDPLQ 56
             V     E     +    A++    +P P     + +S  L G LER     L+    Q
Sbjct: 234 GKVREKSNEHIVVYDDLTGAVKFSSVLPTP-----NHLSGILAGKLERWLQCMLMWHQRQ 288

Query: 57  RATAAELLQHPFLRQ 71
           R T  +       + 
Sbjct: 289 RGTDPQNPNVGCFQA 303

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	90
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.79
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.78
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.69
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.69
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.68
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.65
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.64
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.6
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.6
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.58
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.56
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.55
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.55
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.55
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.54
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.49
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.49
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.48
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.48
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.47
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.47
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.47
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.46
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.45
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.45
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.44
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.44
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.44
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.44
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.43
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.43
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.42
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.42
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.42
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.41
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.41
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.41
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.4
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.4
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.4
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.4
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.4
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.4
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.4
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.4
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.4
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.4
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.39
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.39
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.39
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.39
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.39
3niz_A	311	Rhodanese family protein; structural genomics, str	99.39
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.39
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.37
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.37
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.37
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.37
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.37
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.37
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.36
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.36
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.36
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.36
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.36
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.36
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.36
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.36
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.35
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.35
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.35
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.35
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.34
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.34
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.34
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.34
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.34
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.33
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.33
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.33
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.33
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.33
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.33
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.33
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.33
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.33
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.32
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.32
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.32
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.32
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.31
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.31
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.31
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.31
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.31
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.3
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.3
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.3
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.3
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.3
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.29
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.29
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.29
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.29
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.28
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.28
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.28
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.28
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.28
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.28
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.27
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.27
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.27
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.26
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.26
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.26
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.26
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.26
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.25
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.25
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.24
3bhy_A	283	Death-associated protein kinase 3; death associate	99.24
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.24
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.23
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.23
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.23
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.23
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.22
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.22
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.22
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.22
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.22
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.21
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.21
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.21
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.2
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.19
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.19
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.18
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.18
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.17
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.16
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.16
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.15
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.14
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.12
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.12
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.11
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.11
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.09
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.07
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.06
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.05
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.05
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.03
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	98.99
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	98.97
3ork_A	311	Serine/threonine protein kinase; structural genomi	98.95
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	98.94
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	98.92
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	98.92
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	98.91
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	98.9
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	98.89
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	98.89
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	98.87
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	98.87
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	98.86
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	98.85
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	98.85
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	98.84
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	98.81
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	98.81
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	98.81
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	98.8
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	98.8
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	98.8
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	98.79
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	98.78
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	98.78
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	98.77
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	98.77
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	98.77
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	98.76
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	98.76
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	98.75
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	98.75
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	98.75
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	98.74
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	98.74
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	98.74
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	98.74
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	98.74
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	98.73
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	98.72
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	98.72
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	98.71
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	98.71
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	98.7
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	98.7
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	98.69
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	98.68
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	98.64
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	98.64
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	98.64
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	98.63
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	98.62
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	98.62
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	98.61
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	98.6
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	98.59
3pls_A	298	Macrophage-stimulating protein receptor; protein k	98.59
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	98.57
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	98.57
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	98.55
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	98.54
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	98.53
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	98.52
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	98.5
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	98.48
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	98.47
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	98.45
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	98.44
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	98.43
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	98.42
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	98.41
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	98.37
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	98.36
3uqc_A	286	Probable conserved transmembrane protein; structur	98.33
3soc_A	322	Activin receptor type-2A; structural genomics cons	98.24
2a19_B	284	Interferon-induced, double-stranded RNA-activated	98.22
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	98.19
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	98.19
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	98.18
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	98.16
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	98.15
3q4u_A	301	Activin receptor type-1; structural genomics conso	98.14
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	98.13
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	98.12
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	98.11
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	98.1
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	98.07
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	98.03
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	98.03
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	97.99
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	97.97
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	97.96
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	97.84
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	97.03
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	94.93

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.79  E-value=6e-20  Score=106.31  Aligned_cols=86  Identities=76%  Similarity=1.262  Sum_probs=74.2

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCCCcccHH
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPPALLVP   80 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~~~~~~~   80 (90)
                      ++|||++|.+||.+.+.......+.....+....+..+++++++||.+||..||.+|+++.++++||||+.......+.+
T Consensus       259 ilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~Hp~~~~~~~p~~l~p  338 (346)
T 4fih_A          259 MVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPASIVP  338 (346)
T ss_dssp             HHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCCCGGGTGG
T ss_pred             HHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhcCCCCCcccCc
Confidence            47999999999999998888888877655555556678999999999999999999999999999999998887777777


Q ss_pred             HHhhhh
Q psy10832         81 LMKGSR   86 (90)
Q Consensus        81 ~~~~~~   86 (90)
                      ++++.+
T Consensus       339 l~~~~r  344 (346)
T 4fih_A          339 LMRQNR  344 (346)
T ss_dssp             GSTTTC
T ss_pred             cccccC
Confidence            766554

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.78  E-value=2.2e-19  Score=106.17  Aligned_cols=86  Identities=76%  Similarity=1.262  Sum_probs=75.5

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCCCcccHH
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPPALLVP   80 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~~~~~~~   80 (90)
                      ++|||++|.+||.+.+.......+.....+....+..+++++++||.+||..||.+|+++.++++||||+.......+.+
T Consensus       336 ilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~Hp~~~~~~~p~~l~p  415 (423)
T 4fie_A          336 MVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPASIVP  415 (423)
T ss_dssp             HHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCCCGGGTGG
T ss_pred             HHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHHhcCCCCCccccc
Confidence            47999999999999999888888877765566666788999999999999999999999999999999999888888888


Q ss_pred             HHhhhh
Q psy10832         81 LMKGSR   86 (90)
Q Consensus        81 ~~~~~~   86 (90)
                      ++++.+
T Consensus       416 l~~~~r  421 (423)
T 4fie_A          416 LMRQNR  421 (423)
T ss_dssp             GSGGGC
T ss_pred             hhhhcC
Confidence            777654

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.69  E-value=8.9e-18  Score=94.79  Aligned_cols=69  Identities=22%  Similarity=0.391  Sum_probs=60.8

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCcccccc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQA   72 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~   72 (90)
                      ++|+|++|.+||.+.+.......+..+.   +..+..++++++++|.+||..||.+|+++.++++||||+..
T Consensus       201 ily~lltg~~PF~~~~~~~~~~~i~~~~---~~~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~hpw~k~~  269 (275)
T 3hyh_A          201 ILYVMLCRRLPFDDESIPVLFKNISNGV---YTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKVD  269 (275)
T ss_dssp             HHHHHHHSSCSSCCSSHHHHHHHHHHTC---CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHCHHHHTT
T ss_pred             HHHHHHHCCCCCCCCCHHHHHHHHHcCC---CCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHcCcccccC
Confidence            4789999999999999888888887773   44456789999999999999999999999999999999753

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.69  E-value=8.7e-18  Score=96.18  Aligned_cols=73  Identities=26%  Similarity=0.421  Sum_probs=63.6

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHH------HhcCccccccCC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAE------LLQHPFLRQAGP   74 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~------l~~~~~~~~~~~   74 (90)
                      ++|+|++|.+||.+.+......+|....   +..+..+++++++||.+||..||.+|+++.+      +++||||++..+
T Consensus       223 ilyeml~G~~PF~~~~~~~~~~~i~~~~---~~~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~idw  299 (311)
T 4aw0_A          223 IIYQLVAGLPPFRAGNEGLIFAKIIKLE---YDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTW  299 (311)
T ss_dssp             HHHHHHHSSCSSCCSSHHHHHHHHHHTC---CCCCTTCCHHHHHHHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGTTCCC
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHcCC---CCCCcccCHHHHHHHHHHccCCHhHCcChHHHcCCHHHHCCCCcCCCCH
Confidence            4799999999999999998888888873   4456778999999999999999999999766      689999998776


Q ss_pred             Cc
Q psy10832         75 PA   76 (90)
Q Consensus        75 ~~   76 (90)
                      ..
T Consensus       300 ~~  301 (311)
T 4aw0_A          300 EN  301 (311)
T ss_dssp             TT
T ss_pred             HH
Confidence            54

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.68  E-value=1.8e-17  Score=94.70  Aligned_cols=70  Identities=27%  Similarity=0.441  Sum_probs=61.7

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCC-----HHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRAT-----AAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~-----~~~l~~~~~~~~~~   73 (90)
                      ++|||++|.+||.+.+.......+....   +..|..+++++++||.+||..||.+|++     ++++++||||++..
T Consensus       215 ilyemltG~~PF~~~~~~~~~~~i~~~~---~~~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~id  289 (304)
T 3ubd_A          215 LMFEMLTGTLPFQGKDRKETMTMILKAK---LGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTID  289 (304)
T ss_dssp             HHHHHHHSSCSSCCSSHHHHHHHHHHCC---CCCCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSGGGTTCC
T ss_pred             HHHHHHhCCCCCCCcCHHHHHHHHHcCC---CCCCCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcCccccCCC
Confidence            4799999999999999998888888773   4446678999999999999999999998     58999999999765

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.65  E-value=4.5e-17  Score=92.53  Aligned_cols=70  Identities=20%  Similarity=0.326  Sum_probs=54.8

Q ss_pred             CEEeeecCCCCCCCC-CHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccc
Q psy10832          1 MVVEMVDGEPPFFNE-PPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQ   71 (90)
Q Consensus         1 il~~~~~g~~p~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~   71 (90)
                      ++|||++|.+||.+. +.......+..+.. ....+...++++++||.+||..||.+|+++.++++||||+.
T Consensus       218 ilyelltg~~Pf~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~Hp~~~~  288 (290)
T 3fpq_A          218 CMLEMATSEYPYSECQNAAQIYRRVTSGVK-PASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQE  288 (290)
T ss_dssp             HHHHHHHSSCTTTTCSSHHHHHHHHTTTCC-CGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred             HHHHHHHCCCCCCCCCcHHHHHHHHHcCCC-CCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCccccC
Confidence            478999999999875 44445555554432 22334567899999999999999999999999999999984

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.64  E-value=1.2e-16  Score=92.74  Aligned_cols=71  Identities=17%  Similarity=0.239  Sum_probs=62.1

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      ++|||++|.+||.+.+......++..+..+.  .+..+++++++||.+||..||.+|+++.++++|+||+...
T Consensus       214 ilyemltG~~PF~~~~~~~~~~~i~~~~~~~--~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~~  284 (350)
T 4b9d_A          214 VLYELCTLKHAFEAGSMKNLVLKIISGSFPP--VSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAKRI  284 (350)
T ss_dssp             HHHHHHHSSCSCCCSSHHHHHHHHHHTCCCC--CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHTTG
T ss_pred             HHHHHHHCCCCCCCcCHHHHHHHHHcCCCCC--CCccCCHHHHHHHHHHccCChhHCcCHHHHhcCHHhhcCC
Confidence            4799999999999999999888888875432  3457899999999999999999999999999999998643

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.60  E-value=4.9e-16  Score=94.94  Aligned_cols=75  Identities=24%  Similarity=0.404  Sum_probs=63.2

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCC-CCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCCC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPP-KLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPP   75 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~~   75 (90)
                      ++|+|++|.+||.+.+.......+...... ....+..+++++++||.+||..||.+|+++.++++||||+.....
T Consensus       345 ilyeml~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~Hpw~~~~~~~  420 (573)
T 3uto_A          345 LSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAP  420 (573)
T ss_dssp             HHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTSCCCCT
T ss_pred             HHHHHHHCCCCCCCcCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCcCcCCCCCC
Confidence            478999999999999999888888776432 223345789999999999999999999999999999999976543

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.60  E-value=1.7e-15  Score=86.76  Aligned_cols=88  Identities=67%  Similarity=1.131  Sum_probs=71.9

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCCCcccHH
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPPALLVP   80 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~~~~~~~   80 (90)
                      ++|+|++|..||.+.........+.....+....+..+++.+.+++.+||..||.+||++.++++|+||......+.+.+
T Consensus       230 il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~~~~~~~~~  309 (321)
T 2c30_A          230 MVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLDHPFLLQTGLPECLVP  309 (321)
T ss_dssp             HHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCCTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGGGCCCGGGGHH
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCcCccccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhccCCCcccchH
Confidence            36899999999999888777777766544444444567899999999999999999999999999999999888888888


Q ss_pred             HHhhhhcc
Q psy10832         81 LMKGSRHS   88 (90)
Q Consensus        81 ~~~~~~~~   88 (90)
                      +++..++.
T Consensus       310 ~~~~~~~~  317 (321)
T 2c30_A          310 LIQLYRKQ  317 (321)
T ss_dssp             HHHHC---
T ss_pred             HHHHHHHh
Confidence            88776543

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.58  E-value=1.7e-15  Score=85.94  Aligned_cols=85  Identities=44%  Similarity=0.722  Sum_probs=68.3

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCCCcccHH
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPPALLVP   80 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~~~~~~~   80 (90)
                      ++|+|++|..||.+.+.......+.....+....+..++..+.+++.+||..||.+|+++.++++|+||+.........+
T Consensus       205 il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~~~~~~p  284 (297)
T 3fxz_A          205 MAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIAKPLSSLTP  284 (297)
T ss_dssp             HHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCCCGGGGHH
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhcccCcccccch
Confidence            36899999999999887776666655444445455678999999999999999999999999999999998776666666


Q ss_pred             HHhhh
Q psy10832         81 LMKGS   85 (90)
Q Consensus        81 ~~~~~   85 (90)
                      .....
T Consensus       285 ~~~~~  289 (297)
T 3fxz_A          285 LIAAA  289 (297)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            55544

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.56  E-value=4.4e-16  Score=89.98  Aligned_cols=75  Identities=25%  Similarity=0.401  Sum_probs=61.0

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHH-------------hcCc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAEL-------------LQHP   67 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l-------------~~~~   67 (90)
                      ++|||++|.+||.+.+.......+....++....+..+++++.++|.+||..||.+|+++.++             +.||
T Consensus       245 ilyemltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~l~hP  324 (336)
T 4g3f_A          245 MMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKSP  324 (336)
T ss_dssp             HHHHHHHSSCSSTTTCCSCCHHHHHHSCCGGGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTSSCSC
T ss_pred             HHHHHHHCcCCCCCCCHHHHHHHHHcCCCCchhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhhhccCC
Confidence            479999999999987766666677766544344567889999999999999999999999987             5799


Q ss_pred             cccccCCC
Q psy10832         68 FLRQAGPP   75 (90)
Q Consensus        68 ~~~~~~~~   75 (90)
                      |+.....+
T Consensus       325 w~~~~~~P  332 (336)
T 4g3f_A          325 WKGEYKEP  332 (336)
T ss_dssp             SSSSCCCC
T ss_pred             CcCCCCCC
Confidence            99876544

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.55  E-value=6.4e-15  Score=84.75  Aligned_cols=71  Identities=20%  Similarity=0.379  Sum_probs=61.5

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGP   74 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~   74 (90)
                      ++|+|++|..||.+.+.......+..+   ....+..+++++.+++.+||..||.+|+++.++++|+||.....
T Consensus       203 il~ell~g~~pf~~~~~~~~~~~i~~~---~~~~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~~~  273 (328)
T 3fe3_A          203 ILYTLVSGSLPFDGQNLKELRERVLRG---KYRIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGHE  273 (328)
T ss_dssp             HHHHHHHSSCSSCCSSHHHHHHHHHHC---CCCCCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTCTTTTTTCT
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHhC---CCCCCCCCCHHHHHHHHHHCCCChhHCcCHHHHhcCHhhcCCCc
Confidence            368999999999999988888888777   33445678999999999999999999999999999999986543

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.55  E-value=2.6e-15  Score=88.48  Aligned_cols=74  Identities=23%  Similarity=0.276  Sum_probs=57.8

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCC-CCCC---------------------------CCCCCCHHHHHHHHHhhcc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPP-PKLK---------------------------NTHKVSPRLQGFLERLLVR   52 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~-~~~~---------------------------~~~~~~~~~~~~i~~~l~~   52 (90)
                      ++|||++|.+||.+.+....+..|..... +...                           ....+++++++||.+||..
T Consensus       252 il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~  331 (398)
T 4b99_A          252 IFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRF  331 (398)
T ss_dssp             HHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCS
T ss_pred             HHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcC
Confidence            47899999999999988887776653110 0000                           0134689999999999999


Q ss_pred             CCCCCCCHHHHhcCccccccCC
Q psy10832         53 DPLQRATAAELLQHPFLRQAGP   74 (90)
Q Consensus        53 ~p~~R~~~~~l~~~~~~~~~~~   74 (90)
                      ||.+|+++.++++||||+....
T Consensus       332 dP~~R~ta~e~L~Hp~f~~~~~  353 (398)
T 4b99_A          332 EPSARISAAAALRHPFLAKYHD  353 (398)
T ss_dssp             STTTSCCHHHHTTSGGGTTTCC
T ss_pred             ChhHCcCHHHHhcCHhhCcCCC
Confidence            9999999999999999997653

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.55  E-value=4.4e-15  Score=86.56  Aligned_cols=38  Identities=34%  Similarity=0.543  Sum_probs=34.8

Q ss_pred             CCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCcccccc
Q psy10832         35 THKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQA   72 (90)
Q Consensus        35 ~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~   72 (90)
                      +..+++++++||.+||..||.+|++++++++||||++.
T Consensus       322 ~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f~~i  359 (361)
T 4f9c_A          322 WNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFFKDM  359 (361)
T ss_dssp             CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGTTC
T ss_pred             cccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCCC
Confidence            34678999999999999999999999999999999864

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.54  E-value=6.8e-15  Score=83.21  Aligned_cols=86  Identities=30%  Similarity=0.522  Sum_probs=70.2

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCCCcccHH
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPPALLVP   80 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~~~~~~~   80 (90)
                      ++|+|++|..||...+.......+.....+....+..++.++.+++..||..||.+||++.++++|+||........+..
T Consensus       211 il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~~~~~~~~  290 (302)
T 2j7t_A          211 TLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSITSNKALRE  290 (302)
T ss_dssp             HHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTSTTTTTCCCCHHHHH
T ss_pred             HHHHHhcCCCCCccCCHHHHHHHHhccCCcccCCccccCHHHHHHHHHHcccChhhCCCHHHHhcChHHhhhccchhHHH
Confidence            36889999999999888777766666554444445668999999999999999999999999999999999887776666


Q ss_pred             HHhhhh
Q psy10832         81 LMKGSR   86 (90)
Q Consensus        81 ~~~~~~   86 (90)
                      .+++..
T Consensus       291 ~~~~~~  296 (302)
T 2j7t_A          291 LVAEAK  296 (302)
T ss_dssp             HHHHHH
T ss_pred             HHHHHh
Confidence            666543

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.49  E-value=3.5e-14  Score=80.74  Aligned_cols=85  Identities=36%  Similarity=0.665  Sum_probs=67.7

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCCCcccHH
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPPALLVP   80 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~~~~~~~   80 (90)
                      ++|+|++|..||...........+.....+....+..++..+.+++..||..||..||++.+++.|+||........+..
T Consensus       214 il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~~~~~~~~~~~~~~~  293 (314)
T 3com_A          214 TAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQHPFVRSAKGVSILRD  293 (314)
T ss_dssp             HHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHTCCCGGGGHH
T ss_pred             HHHHHHhCCCCCCCCChHHHHHHHhcCCCcccCCcccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhcCCcchHHHH
Confidence            36889999999998877766665555544444445567999999999999999999999999999999998877766666


Q ss_pred             HHhhh
Q psy10832         81 LMKGS   85 (90)
Q Consensus        81 ~~~~~   85 (90)
                      .+++.
T Consensus       294 ~~~~~  298 (314)
T 3com_A          294 LINEA  298 (314)
T ss_dssp             HHHHH
T ss_pred             Hhhhh
Confidence            55443

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.49  E-value=1.3e-14  Score=84.27  Aligned_cols=70  Identities=21%  Similarity=0.423  Sum_probs=61.3

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCH------HHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA------AELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~------~~l~~~~~~~~~~   73 (90)
                      ++|+|++|..||.+.+.......+...   ....+..+++++.++|.+||..||.+|+++      .++++||||.+..
T Consensus       213 il~ell~G~~Pf~~~~~~~~~~~i~~~---~~~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~hp~f~~~~  288 (353)
T 3txo_A          213 LLYEMLCGHAPFEAENEDDLFEAILND---EVVYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEID  288 (353)
T ss_dssp             HHHHHHHSSCSSCCSSHHHHHHHHHHC---CCCCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTSGGGTTCC
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHcC---CCCCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhCCcccCCC
Confidence            468999999999999998888888877   344456789999999999999999999997      8999999999754

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.47  E-value=2e-14  Score=83.68  Aligned_cols=73  Identities=21%  Similarity=0.419  Sum_probs=60.3

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCC-CCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPP-KLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      ++|+|++|.+||.+.+.......+...... ....+..+++++++||..||..||.+|+++.++++||||....
T Consensus       207 il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~  280 (361)
T 2yab_A          207 ITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVD  280 (361)
T ss_dssp             HHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTSCSS
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhcCcCcCCCc
Confidence            368999999999999888888887766331 1122356799999999999999999999999999999998643

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.47  E-value=4.2e-14  Score=81.66  Aligned_cols=70  Identities=29%  Similarity=0.485  Sum_probs=60.1

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCC-----CHHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRA-----TAAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~-----~~~~l~~~~~~~~~~   73 (90)
                      ++|+|++|..||.+.+.......+...   ....+..+++++.++|.+||..||.+|+     ++.++++|+||.+..
T Consensus       194 il~ell~g~~Pf~~~~~~~~~~~i~~~---~~~~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h~~f~~~~  268 (337)
T 1o6l_A          194 VMYEMMCGRLPFYNQDHERLFELILME---EIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSIN  268 (337)
T ss_dssp             HHHHHHHSSCSSCCSSHHHHHHHHHHC---CCCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTCC
T ss_pred             HHHHHhcCCCCCCCCCHHHHHHHHHcC---CCCCCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcCCCcCCCC
Confidence            368999999999998888877777766   3344567899999999999999999999     899999999998754

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.47  E-value=7.3e-14  Score=78.71  Aligned_cols=71  Identities=21%  Similarity=0.419  Sum_probs=56.3

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQ   71 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~   71 (90)
                      ++|+|++|..||.+.........+.............+++++.+++..||..||.+||++.+++.|+||+.
T Consensus       214 il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~f~~  284 (285)
T 3is5_A          214 VMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHHEWFKQ  284 (285)
T ss_dssp             HHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCC--CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGGC
T ss_pred             HHHHHHhCCCCCCCCCHHHHHhhhccCCcccccccCcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHhhc
Confidence            36899999999999887776666554433222222347899999999999999999999999999999985

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.46  E-value=3.2e-14  Score=88.24  Aligned_cols=71  Identities=30%  Similarity=0.439  Sum_probs=57.1

Q ss_pred             CEEeeecCCCCCCCC---CHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCC-----HHHHhcCcccccc
Q psy10832          1 MVVEMVDGEPPFFNE---PPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRAT-----AAELLQHPFLRQA   72 (90)
Q Consensus         1 il~~~~~g~~p~~~~---~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~-----~~~l~~~~~~~~~   72 (90)
                      ++|||++|.+||.+.   +.......+...   ....|..+++++++||.+||..||.+|++     ++++++||||++.
T Consensus       380 ilYEmLtG~~PF~~~~~~~~~~i~~~i~~~---~~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~i  456 (689)
T 3v5w_A          380 MLFKLLRGHSPFRQHKTKDKHEIDRMTLTM---AVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSL  456 (689)
T ss_dssp             HHHHHHHSSCTTCGGGCCCHHHHHHHHHHC---CCCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGGGTTC
T ss_pred             HHHHHHhCCCCCCCCChHHHHHHHHhhcCC---CCCCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcCccccCC
Confidence            479999999999763   344445555555   34456778999999999999999999997     6999999999986


Q ss_pred             CC
Q psy10832         73 GP   74 (90)
Q Consensus        73 ~~   74 (90)
                      .+
T Consensus       457 dW  458 (689)
T 3v5w_A          457 DW  458 (689)
T ss_dssp             CH
T ss_pred             CH
Confidence            54

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.45  E-value=6.5e-14  Score=80.30  Aligned_cols=70  Identities=23%  Similarity=0.500  Sum_probs=60.3

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCC-----CHHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRA-----TAAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~-----~~~~l~~~~~~~~~~   73 (90)
                      ++|+|++|..||.+.+.......+....   ...+..+++++.+++.+||..||.+|+     +++++++||||.+..
T Consensus       192 il~ell~g~~pf~~~~~~~~~~~i~~~~---~~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~hp~f~~~~  266 (318)
T 1fot_A          192 LIYEMLAGYTPFYDSNTMKTYEKILNAE---LRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVV  266 (318)
T ss_dssp             HHHHHHHSSCTTCCSSHHHHHHHHHHCC---CCCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSSCC
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHhCC---CCCCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcCccccCCC
Confidence            3689999999999988888887877763   344567899999999999999999999     899999999998654

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.45  E-value=1.2e-13  Score=79.28  Aligned_cols=77  Identities=25%  Similarity=0.330  Sum_probs=61.5

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCC-CCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCCCcc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPP-PKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPPAL   77 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~~~~   77 (90)
                      ++|+|++|..||.+.+.......+..... .....+..++..+.+++..||..||.+||++.++++|+||+.......
T Consensus       222 il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h~~~~~~~~~~~  299 (327)
T 3lm5_A          222 IAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQWDFENL  299 (327)
T ss_dssp             HHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCGGGCCCCTTCC
T ss_pred             HHHHHHhCCCCCCCCCchHHHHHHHhcccccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCCHhhcccccccc
Confidence            36899999999999888777666655432 222334568999999999999999999999999999999998765543

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.44  E-value=6.6e-14  Score=81.32  Aligned_cols=70  Identities=20%  Similarity=0.374  Sum_probs=60.2

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCC-----HHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRAT-----AAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~-----~~~l~~~~~~~~~~   73 (90)
                      ++|+|++|..||.+.+.......+....   ...+..++.++.++|.+||..||.+|++     +.+++.|+||....
T Consensus       210 il~ell~G~~Pf~~~~~~~~~~~i~~~~---~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h~~f~~~~  284 (353)
T 2i0e_A          210 LLYEMLAGQAPFEGEDEDELFQSIMEHN---VAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYID  284 (353)
T ss_dssp             HHHHHHHSSCSSCCSSHHHHHHHHHHCC---CCCCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTSGGGTTCC
T ss_pred             HHHHHHcCCCCCCCCCHHHHHHHHHhCC---CCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCccccCCC
Confidence            3689999999999998888888887763   3445678999999999999999999995     68999999998654

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.44  E-value=7.8e-14  Score=80.90  Aligned_cols=70  Identities=26%  Similarity=0.484  Sum_probs=60.9

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCC-----HHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRAT-----AAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~-----~~~l~~~~~~~~~~   73 (90)
                      ++|+|++|..||.+.+.......+..+.   ...+..++.++.++|.+||..||.+|++     +.++++|+||.+..
T Consensus       227 il~ell~g~~Pf~~~~~~~~~~~i~~~~---~~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h~~f~~~~  301 (350)
T 1rdq_E          227 LIYEMAAGYPPFFADQPIQIYEKIVSGK---VRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTD  301 (350)
T ss_dssp             HHHHHHHSSCSSCCSSHHHHHHHHHHCC---CCCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTTCC
T ss_pred             hHhHHhhCCCCCCCCCHHHHHHHHHcCC---CCCCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhCcCcCCCC
Confidence            3689999999999998888888887773   3445678999999999999999999998     89999999998754

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.44  E-value=1.3e-13  Score=81.95  Aligned_cols=70  Identities=29%  Similarity=0.463  Sum_probs=60.5

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCC-----CHHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRA-----TAAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~-----~~~~l~~~~~~~~~~   73 (90)
                      ++|+|++|..||.+.+.......+....   ...+..+++++.++|.+||..||.+|+     ++.++++||||.+..
T Consensus       338 il~ell~g~~Pf~~~~~~~~~~~i~~~~---~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp~f~~~~  412 (446)
T 4ejn_A          338 VMYEMMCGRLPFYNQDHEKLFELILMEE---IRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIV  412 (446)
T ss_dssp             HHHHHHHSSCSSCCSSHHHHHHHHHHCC---CCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTCC
T ss_pred             HHHHHhhCCCCCCCCCHHHHHHHHHhCC---CCCCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhCccccCCC
Confidence            4689999999999998888877777663   334567899999999999999999999     999999999999764

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.44  E-value=7.1e-14  Score=86.79  Aligned_cols=70  Identities=20%  Similarity=0.384  Sum_probs=61.8

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCH-----HHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA-----AELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~-----~~l~~~~~~~~~~   73 (90)
                      ++|||++|.+||.+.+.......|...   ....+..+++++.+||..||..||.+|+++     .+++.|+||.+..
T Consensus       531 ilyelltG~~Pf~~~~~~~~~~~i~~~---~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h~ff~~i~  605 (674)
T 3pfq_A          531 LLYEMLAGQAPFEGEDEDELFQSIMEH---NVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYID  605 (674)
T ss_dssp             HHHHHHHSSCSSCCSSHHHHHHHHHSS---CCCCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSSGGGSSCC
T ss_pred             HHHHHHcCCCCCCCCCHHHHHHHHHhC---CCCCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcCccccCCC
Confidence            478999999999999998888888877   344556789999999999999999999986     8999999999765

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.43  E-value=1.3e-13  Score=78.08  Aligned_cols=69  Identities=20%  Similarity=0.427  Sum_probs=56.6

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCcccc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLR   70 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~   70 (90)
                      ++|+|++|..||.+.........+..... ..+....+++++.+++.+||..||.+|+++.++++||||+
T Consensus       229 ~l~~l~~g~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~hp~~~  297 (298)
T 2zv2_A          229 TLYCFVFGQCPFMDERIMCLHSKIKSQAL-EFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVT  297 (298)
T ss_dssp             HHHHHHHSSCSSCCSSHHHHHHHHHHCCC-CCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTCHHHH
T ss_pred             HHHHHHHCCCCCCCccHHHHHHHHhcccC-CCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhcCcccc
Confidence            36899999999999887776666655432 2222346899999999999999999999999999999986

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.43  E-value=1.5e-13  Score=81.95  Aligned_cols=71  Identities=25%  Similarity=0.505  Sum_probs=59.5

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCC-CCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPP-KLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQ   71 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~   71 (90)
                      ++|+|++|.+||.+.+.......+..+... ....+..++++++++|.+||..||.+|+++.++++||||..
T Consensus       202 ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~hp~~~~  273 (444)
T 3soa_A          202 ILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWISH  273 (444)
T ss_dssp             HHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSCTTHH
T ss_pred             HHHHHHhCCCCCCCccHHHHHHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCCCHHHHhcCccccC
Confidence            468999999999999888888887766432 22233568999999999999999999999999999999975

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.42  E-value=7.1e-14  Score=78.40  Aligned_cols=71  Identities=25%  Similarity=0.491  Sum_probs=59.9

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGP   74 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~   74 (90)
                      ++|+|++|..||.+.........+...   ....+..++.++.+++.+||..||.+||++.++++|+||.....
T Consensus       196 il~~l~~g~~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h~~~~~~~~  266 (279)
T 3fdn_A          196 LCYEFLVGKPPFEANTYQETYKRISRV---EFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS  266 (279)
T ss_dssp             HHHHHHHSSCTTCCSSHHHHHHHHHHT---CCCCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHCHHHHHHCS
T ss_pred             HHHHHHHCCCCCCCCcHHHHHHHHHhC---CCCCCCcCCHHHHHHHHHHhccChhhCCCHHHHhhCccccCCcc
Confidence            368899999999998888777777665   33345568999999999999999999999999999999997553

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.42  E-value=2.8e-14  Score=82.66  Aligned_cols=70  Identities=24%  Similarity=0.424  Sum_probs=60.3

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHH-HHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAA-ELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~-~l~~~~~~~~~~   73 (90)
                      ++|+|++|..||.+.+.......+....   ...+..++.+++++|.+||..||.+|+++. ++++||||.+..
T Consensus       207 il~ell~g~~Pf~~~~~~~~~~~i~~~~---~~~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~hp~f~~~~  277 (345)
T 1xjd_A          207 LLYEMLIGQSPFHGQDEEELFHSIRMDN---PFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREIN  277 (345)
T ss_dssp             HHHHHHHSSCSSCCSSHHHHHHHHHHCC---CCCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGSGGGTTCC
T ss_pred             HHHHHhcCCCCCCCCCHHHHHHHHHhCC---CCCCcccCHHHHHHHHHHhcCCHhHcCCChHHHHcCccccCCC
Confidence            3689999999999998888888877663   334567899999999999999999999987 999999998765

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.42  E-value=5.9e-14  Score=78.92  Aligned_cols=71  Identities=25%  Similarity=0.433  Sum_probs=59.6

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGP   74 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~   74 (90)
                      ++|+|++|..||...........+....   ...+..++.++.+++..||..||.+|+++.++++|+||.....
T Consensus       201 il~~l~~g~~pf~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h~~~~~~~~  271 (284)
T 2vgo_A          201 LCYEFLVGMPPFDSPSHTETHRRIVNVD---LKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKANSR  271 (284)
T ss_dssp             HHHHHHHSSCTTCCSSHHHHHHHHHTTC---CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTCHHHHHHCC
T ss_pred             HHHHHHHCCCCCCCCCHhHHHHHHhccc---cCCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhCHHHHhhcc
Confidence            3678999999999988877777776653   3345678999999999999999999999999999999986543

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.41  E-value=1.1e-13  Score=82.96  Aligned_cols=75  Identities=20%  Similarity=0.468  Sum_probs=62.3

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCC-CCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCCC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPP-KLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPP   75 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~~   75 (90)
                      ++|+|++|.+||.+.+.......+..+... ..+.+..++++++++|.+||..||.+|+++.+++.||||+.....
T Consensus       211 il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~hp~~~~~~~~  286 (486)
T 3mwu_A          211 ILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSSE  286 (486)
T ss_dssp             HHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHCHHHHHTCCC
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCHhhccCccc
Confidence            368999999999999888888887766432 233345689999999999999999999999999999999976544

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.41  E-value=2e-13  Score=79.08  Aligned_cols=82  Identities=27%  Similarity=0.556  Sum_probs=64.7

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCCCcccHH
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPPALLVP   80 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~~~~~~~   80 (90)
                      ++|+|++|..||.+.+.......+.....+... ...+++.+.+++..||..||.+||++.++++|+||..........+
T Consensus       242 il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~~~~~~~~~~~~~~  320 (348)
T 1u5q_A          242 TCIELAERKPPLFNMNAMSALYHIAQNESPALQ-SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPPTVIMD  320 (348)
T ss_dssp             HHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCC-CTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHSCCCTTHHHH
T ss_pred             HHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCC-CCCCCHHHHHHHHHHcccChhhCcCHHHHhhChhhhccCCcchhhH
Confidence            368999999999998877776666655433322 3467999999999999999999999999999999988766655554


Q ss_pred             HHh
Q psy10832         81 LMK   83 (90)
Q Consensus        81 ~~~   83 (90)
                      .++
T Consensus       321 ~~~  323 (348)
T 1u5q_A          321 LIQ  323 (348)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            444

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.41  E-value=1.2e-13  Score=79.41  Aligned_cols=74  Identities=23%  Similarity=0.305  Sum_probs=59.7

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCC-CCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPP-KLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGP   74 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~   74 (90)
                      ++|+|++|..||.+.........+...... .......+++++.++|..||..||.+|+++.++++||||+...+
T Consensus       265 il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~hp~~~~~~~  339 (345)
T 3hko_A          265 LLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQFSD  339 (345)
T ss_dssp             HHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHSHHHHTTSS
T ss_pred             HHHHHHHCCCCCCCCChHHHHHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHhcChhhccChH
Confidence            368999999999998888777776655331 12222347899999999999999999999999999999997654

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.40  E-value=7e-14  Score=83.72  Aligned_cols=73  Identities=19%  Similarity=0.356  Sum_probs=61.3

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCC-CCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPP-PKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      ++|+|++|.+||.+.+.......+..+.. ...+.+..++++++++|.+||..+|.+|+++.+++.||||+...
T Consensus       216 il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h~~~~~~~  289 (484)
T 3nyv_A          216 ILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYT  289 (484)
T ss_dssp             HHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHHHT
T ss_pred             HHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhChhhcccc
Confidence            36899999999999998888888777643 22333456899999999999999999999999999999998654

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.40  E-value=2.1e-13  Score=80.03  Aligned_cols=73  Identities=25%  Similarity=0.458  Sum_probs=59.8

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCC-CCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPP-PKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      ++|+|++|..||.+.+.......+..... .....+..+++++.++|.+||..||.+|+++.++++|+||.+..
T Consensus       239 il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~  312 (387)
T 1kob_A          239 LGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDH  312 (387)
T ss_dssp             HHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTTTSSCC
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCccccCCc
Confidence            36899999999999888777777766532 12223456899999999999999999999999999999998643

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.40  E-value=2.3e-13  Score=77.05  Aligned_cols=70  Identities=19%  Similarity=0.328  Sum_probs=59.8

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      ++|+|++|..||.+.+.......+....   ...+..+++.+.+++.+||..||.+|+++.++++|+||....
T Consensus       202 il~~l~~g~~p~~~~~~~~~~~~i~~~~---~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~  271 (305)
T 2wtk_C          202 TLYNITTGLYPFEGDNIYKLFENIGKGS---YAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKH  271 (305)
T ss_dssp             HHHHHHHSSCSCCCSSHHHHHHHHHHCC---CCCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHSHHHHSCC
T ss_pred             HHHHHHhCCCCCCCchHHHHHHHHhcCC---CCCCCccCHHHHHHHHHHccCChhhCCCHHHHhcCcccccCC
Confidence            3689999999999988887777776663   334557899999999999999999999999999999998654

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.40  E-value=1.2e-13  Score=77.30  Aligned_cols=70  Identities=23%  Similarity=0.369  Sum_probs=58.5

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      ++|+|++|..||.+.........+....   ...+..++..+.+++..||..||.+||++.++++|+||+...
T Consensus       200 ~l~~l~~g~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h~~~~~~~  269 (276)
T 2h6d_A          200 ILYALLCGTLPFDDEHVPTLFKKIRGGV---FYIPEYLNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQDL  269 (276)
T ss_dssp             HHHHHHHSSCSSCCSSHHHHHHHHHHCC---CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHTTC
T ss_pred             HHHHHHhCCCCCCCCcHHHHHHHhhcCc---ccCchhcCHHHHHHHHHHccCChhhCCCHHHHHhChhhccCc
Confidence            3688999999999988777777766552   233456799999999999999999999999999999998654

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.40  E-value=2.4e-13  Score=78.59  Aligned_cols=72  Identities=29%  Similarity=0.421  Sum_probs=57.5

Q ss_pred             CEEeeecCCCCCCC---CCHHHHHHHhhcCCCC-CCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCcccccc
Q psy10832          1 MVVEMVDGEPPFFN---EPPLQAMRRIRDMPPP-KLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQA   72 (90)
Q Consensus         1 il~~~~~g~~p~~~---~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~   72 (90)
                      ++|+|++|..||.+   .........+..+... ....+..++++++++|.+||..||.+|+++.++++||||...
T Consensus       209 il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~hp~~~~~  284 (342)
T 2qr7_A          209 LLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVHW  284 (342)
T ss_dssp             HHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHTG
T ss_pred             HHHHHhcCCCCCCCCCcCCHHHHHHHHccCCcccCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCCeecCc
Confidence            46899999999986   3556666677665432 222345789999999999999999999999999999999754

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.40  E-value=2.1e-13  Score=78.30  Aligned_cols=70  Identities=27%  Similarity=0.523  Sum_probs=59.6

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCC-----CHHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRA-----TAAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~-----~~~~l~~~~~~~~~~   73 (90)
                      ++|+|++|..||.+.+.......+....   ...+..++.++.+++.+||..||.+|+     ++.+++.||||....
T Consensus       210 il~el~~g~~pf~~~~~~~~~~~i~~~~---~~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~f~~~~  284 (327)
T 3a62_A          210 LMYDMLTGAPPFTGENRKKTIDKILKCK---LNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHIN  284 (327)
T ss_dssp             HHHHHHHSSCSCCCSSHHHHHHHHHHTC---CCCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGGGSSCC
T ss_pred             HHHHHHHCCCCCCCCCHHHHHHHHHhCC---CCCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcCCcccCCC
Confidence            3689999999999998888877777663   334567899999999999999999999     789999999998654

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.40  E-value=1.6e-13  Score=82.47  Aligned_cols=69  Identities=22%  Similarity=0.446  Sum_probs=59.1

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCcccccc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQA   72 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~   72 (90)
                      ++|+|++|..||.+.+.......+..+.   ...+..+++++.+++.+||..||.+|+++.+++.|+||...
T Consensus       205 il~elltG~~Pf~~~~~~~~~~~i~~~~---~~~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~hp~~~~~  273 (476)
T 2y94_A          205 ILYALLCGTLPFDDDHVPTLFKKICDGI---FYTPQYLNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQD  273 (476)
T ss_dssp             HHHHHHHSSCSSCCSSSHHHHHHHHTTC---CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHTT
T ss_pred             HHHHHhhCCCCCCCCCHHHHHHHHhcCC---cCCCccCCHHHHHHHHHHcCCCchhCcCHHHHHhCHHhhhc
Confidence            3689999999999988777777777663   33455689999999999999999999999999999999864

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.40  E-value=1.5e-13  Score=82.58  Aligned_cols=72  Identities=19%  Similarity=0.409  Sum_probs=60.3

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCC-CCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCcccccc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPP-KLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQA   72 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~   72 (90)
                      ++|+|++|.+||.+.+.......+..+... ..+.+..++++++++|.+||..||.+|+++.++++||||+..
T Consensus       226 il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~hp~~~~~  298 (494)
T 3lij_A          226 ILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEM  298 (494)
T ss_dssp             HHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCSGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHHH
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCchhcccCCHHHHHHHHHHCCCChhhCccHHHHhcCcccccC
Confidence            368999999999999888888887766432 223345689999999999999999999999999999999863

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.40  E-value=8.1e-14  Score=83.93  Aligned_cols=75  Identities=16%  Similarity=0.282  Sum_probs=62.1

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCC-CCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCCC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPP-KLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPP   75 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~~   75 (90)
                      ++|+|++|.+||.+.+.......+..+... ....+..++++++++|..||..||.+||++.++++||||+.....
T Consensus       236 il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~~~  311 (504)
T 3q5i_A          236 IMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYANN  311 (504)
T ss_dssp             HHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHTCCC
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCHhhhhchhc
Confidence            368999999999999988888888776431 122235689999999999999999999999999999999876543

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.40  E-value=3.5e-13  Score=75.63  Aligned_cols=74  Identities=20%  Similarity=0.395  Sum_probs=59.7

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCC-CCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPP-KLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGP   74 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~   74 (90)
                      ++|+|++|..||.+.........+...... ....+..+++++.+++..||..||.+||++.++++|+||.....
T Consensus       196 ~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~  270 (284)
T 3kk8_A          196 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNRER  270 (284)
T ss_dssp             HHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTSHHHHSCCC
T ss_pred             HHHHHHHCCCCCCCCchhHHHHHHHhccccCCchhhcccCHHHHHHHHHHcccChhhCCCHHHHhcCccccCChh
Confidence            368899999999998888777776655331 12223467999999999999999999999999999999986543

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.39  E-value=4e-13  Score=75.74  Aligned_cols=72  Identities=26%  Similarity=0.405  Sum_probs=53.6

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhc--CCCCC---------------C---------CCCCCCCHHHHHHHHHhhccCC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRD--MPPPK---------------L---------KNTHKVSPRLQGFLERLLVRDP   54 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~--~~~~~---------------~---------~~~~~~~~~~~~~i~~~l~~~p   54 (90)
                      ++|+|++|..||.+.+.......+..  +....               .         .....+++++.+++.+||..||
T Consensus       190 il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  269 (288)
T 1ob3_A          190 IFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDP  269 (288)
T ss_dssp             HHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSST
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCc
Confidence            36899999999999877665554432  00000               0         0123478999999999999999


Q ss_pred             CCCCCHHHHhcCcccccc
Q psy10832         55 LQRATAAELLQHPFLRQA   72 (90)
Q Consensus        55 ~~R~~~~~l~~~~~~~~~   72 (90)
                      .+|+++.++++|+||++.
T Consensus       270 ~~Rpt~~e~l~hp~f~~~  287 (288)
T 1ob3_A          270 NQRITAKQALEHAYFKEN  287 (288)
T ss_dssp             TTSCCHHHHHTSGGGGC-
T ss_pred             ccCCCHHHHhcCcchhhc
Confidence            999999999999999853

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.39  E-value=1.3e-13  Score=77.65  Aligned_cols=70  Identities=20%  Similarity=0.329  Sum_probs=53.2

Q ss_pred             CEEeeecCCCCCCCCC-HHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccc
Q psy10832          1 MVVEMVDGEPPFFNEP-PLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQ   71 (90)
Q Consensus         1 il~~~~~g~~p~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~   71 (90)
                      ++|+|++|..||.+.. .......+..... ....+...++++.+++..||..||.+||++.++++|+||++
T Consensus       218 ~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~f~~  288 (290)
T 1t4h_A          218 CMLEMATSEYPYSECQNAAQIYRRVTSGVK-PASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQE  288 (290)
T ss_dssp             HHHHHHHSSCTTTTCSSHHHHHHHHTTTCC-CGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred             HHHHHHhCCCCCCCcCcHHHHHHHHhccCC-ccccCCCCCHHHHHHHHHHccCChhhCCCHHHHhhCccccc
Confidence            3688999999998854 4444444443322 23334566899999999999999999999999999999985

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.39  E-value=3.2e-14  Score=81.54  Aligned_cols=72  Identities=32%  Similarity=0.505  Sum_probs=59.5

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCC-CCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCcccccc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPP-KLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQA   72 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~   72 (90)
                      ++|+|++|..||.+.+.......+...... ....+..++.++.+++.+||..||.+||++.++++||||...
T Consensus       192 il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~  264 (321)
T 1tki_A          192 LVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQK  264 (321)
T ss_dssp             HHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHSC
T ss_pred             HHHHHHhCCCCCcCCCHHHHHHHHHcCCCCCChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcChhhccC
Confidence            368999999999999888888777766432 111234679999999999999999999999999999999864

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.39  E-value=4.6e-13  Score=77.28  Aligned_cols=82  Identities=21%  Similarity=0.288  Sum_probs=60.2

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhc--CCCCCCCCCCC----------------------------CCHHHHHHHHHhh
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRD--MPPPKLKNTHK----------------------------VSPRLQGFLERLL   50 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~--~~~~~~~~~~~----------------------------~~~~~~~~i~~~l   50 (90)
                      ++|+|++|.+||.+.........+..  +..+ ...+..                            .++.+.++|.+||
T Consensus       218 il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  296 (351)
T 3mi9_A          218 IMAEMWTRSPIMQGNTEQHQLALISQLCGSIT-PEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLL  296 (351)
T ss_dssp             HHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCC-TTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHS
T ss_pred             HHHHHHhCCCCCCCCChHHHHHHHHHHhCCCC-hhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHh
Confidence            36899999999999887766655543  1111 111111                            2678999999999


Q ss_pred             ccCCCCCCCHHHHhcCccccccCCCcccHHHHh
Q psy10832         51 VRDPLQRATAAELLQHPFLRQAGPPALLVPLMK   83 (90)
Q Consensus        51 ~~~p~~R~~~~~l~~~~~~~~~~~~~~~~~~~~   83 (90)
                      ..||.+|+++.++++|+||.+..........+.
T Consensus       297 ~~dP~~R~t~~e~l~hp~f~~~~~~~~~~~~~~  329 (351)
T 3mi9_A          297 VLDPAQRIDSDDALNHDFFWSDPMPSDLKGMLS  329 (351)
T ss_dssp             CSSGGGSCCHHHHHTSGGGGSSSCCCCSHHHHH
T ss_pred             cCChhhCCCHHHHhCCCCcCCCCCccccccccC
Confidence            999999999999999999998776665554443

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.39  E-value=3.7e-13  Score=76.33  Aligned_cols=73  Identities=23%  Similarity=0.410  Sum_probs=60.0

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCC-CCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPP-KLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      ++|+|++|..||.+.........+..+... ....+..+++++.+++.+||..||.+|+++.+++.|+||.+..
T Consensus       196 il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~  269 (304)
T 2jam_A          196 ITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICHLLEKDPNERYTCEKALSHPWIDGNT  269 (304)
T ss_dssp             HHHHHHHSSCTTTTSCHHHHHHHHHHCCCCCCTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHSSC
T ss_pred             HHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCccccCCC
Confidence            368999999999998888777777665431 2233456799999999999999999999999999999998754

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.39  E-value=8.6e-14  Score=79.38  Aligned_cols=73  Identities=22%  Similarity=0.411  Sum_probs=52.5

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhc---CCCC-CC-----------------------CCCCCCCHHHHHHHHHhhccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRD---MPPP-KL-----------------------KNTHKVSPRLQGFLERLLVRD   53 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~---~~~~-~~-----------------------~~~~~~~~~~~~~i~~~l~~~   53 (90)
                      ++|+|++|..||.+.........+..   ...+ ..                       .....+++++.+||.+||..|
T Consensus       209 il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  288 (311)
T 3niz_A          209 IFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFD  288 (311)
T ss_dssp             HHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSC
T ss_pred             HHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCC
Confidence            36899999999987654444333321   1000 00                       011246789999999999999


Q ss_pred             CCCCCCHHHHhcCccccccC
Q psy10832         54 PLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus        54 p~~R~~~~~l~~~~~~~~~~   73 (90)
                      |.+|+++.++++||||++..
T Consensus       289 P~~Rpt~~ell~hp~f~~~~  308 (311)
T 3niz_A          289 PNKRISARDAMNHPYFKDLD  308 (311)
T ss_dssp             TTTSCCHHHHHTSGGGTTSC
T ss_pred             hhHCCCHHHHhcCcccccCC
Confidence            99999999999999999754

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.39  E-value=1.4e-13  Score=77.59  Aligned_cols=74  Identities=20%  Similarity=0.477  Sum_probs=60.3

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCC-CCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPP-KLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGP   74 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~   74 (90)
                      ++|+|++|..||.+.+.......+..+... ..+.+..++.++.+++..||..||.+||++.+++.|+||....+
T Consensus       211 ~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~~~~~~~  285 (287)
T 2wei_A          211 ILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSS  285 (287)
T ss_dssp             HHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHHHCC
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcCHHHhcccc
Confidence            367899999999998888777777665431 22223567999999999999999999999999999999987654

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.37  E-value=3.1e-13  Score=77.40  Aligned_cols=75  Identities=21%  Similarity=0.344  Sum_probs=56.6

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhc--CCCCCCC-------------------------CCCCCCHHHHHHHHHhhccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRD--MPPPKLK-------------------------NTHKVSPRLQGFLERLLVRD   53 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~--~~~~~~~-------------------------~~~~~~~~~~~~i~~~l~~~   53 (90)
                      ++|+|++|..||.+.+.......+..  +.+....                         ....+++++.+|+.+||..|
T Consensus       190 il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  269 (324)
T 3mtl_A          190 IFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFE  269 (324)
T ss_dssp             HHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSS
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcC
Confidence            36899999999999887766655443  1110000                         11246889999999999999


Q ss_pred             CCCCCCHHHHhcCccccccCCC
Q psy10832         54 PLQRATAAELLQHPFLRQAGPP   75 (90)
Q Consensus        54 p~~R~~~~~l~~~~~~~~~~~~   75 (90)
                      |.+|+++.++++||||.+....
T Consensus       270 P~~R~t~~e~l~hp~f~~~~~~  291 (324)
T 3mtl_A          270 GRNRISAEDAMKHPFFLSLGER  291 (324)
T ss_dssp             GGGSCCHHHHTTSGGGGGGCST
T ss_pred             cccCCCHHHHhcChhhhhcccc
Confidence            9999999999999999987643

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.37  E-value=1.3e-13  Score=79.13  Aligned_cols=73  Identities=23%  Similarity=0.479  Sum_probs=58.6

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCC-CCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPP-KLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      ++|+|++|..||.+.........+...... ....+..++..+.+++.+||..||.+||++.++++||||....
T Consensus       206 il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~  279 (326)
T 2y0a_A          206 ITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKD  279 (326)
T ss_dssp             HHHHHHHSCCSSCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTSCCS
T ss_pred             HHHHHHHCcCCCCCCCHHHHHHHHHhcCCCcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhcCCCccCCc
Confidence            368999999999998887777776654321 1112346789999999999999999999999999999998654

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.37  E-value=1.3e-13  Score=80.52  Aligned_cols=73  Identities=21%  Similarity=0.410  Sum_probs=59.9

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCC-CCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPP-KLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      ++|+|++|..||.+.+.......+...... ....+..+++++++||.+||..||.+|+++.++++||||....
T Consensus       277 il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~hp~~~~~~  350 (373)
T 2x4f_A          277 IAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLLIKEKSWRISASEALKHPWLSDHK  350 (373)
T ss_dssp             HHHHHHHSSCTTCCSSHHHHHHHHHHTCCCSCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHCHH
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHhccCCCChhhhccCCHHHHHHHHHHcCCChhhCCCHHHHhcCcCcCCCc
Confidence            368999999999999888877777665321 1222346799999999999999999999999999999999654

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.37  E-value=1.6e-13  Score=79.80  Aligned_cols=71  Identities=21%  Similarity=0.423  Sum_probs=58.5

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCC-CCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPP-KLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQ   71 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~   71 (90)
                      ++|+|++|.+||.+.+.......+..+... ....+..+++++.++|.+||..||.+|+++.+++.|+||..
T Consensus       219 il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  290 (362)
T 2bdw_A          219 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICN  290 (362)
T ss_dssp             HHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTSHHHHT
T ss_pred             HHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcccCC
Confidence            468999999999998888877777665431 11223467999999999999999999999999999999975

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.37  E-value=1.7e-13  Score=80.09  Aligned_cols=40  Identities=35%  Similarity=0.621  Sum_probs=33.6

Q ss_pred             CCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCC
Q psy10832         35 THKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGP   74 (90)
Q Consensus        35 ~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~   74 (90)
                      +..+++++.+||.+||..||.+|+++.++++||||+....
T Consensus       303 ~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~~~~  342 (389)
T 3gni_B          303 HRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIKR  342 (389)
T ss_dssp             ---CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGGC--
T ss_pred             ccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHHHhh
Confidence            3457889999999999999999999999999999997653

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.37  E-value=2e-13  Score=80.16  Aligned_cols=74  Identities=27%  Similarity=0.460  Sum_probs=56.2

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcC-------------------CCCCC-------CCCCCCCHHHHHHHHHhhccCC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDM-------------------PPPKL-------KNTHKVSPRLQGFLERLLVRDP   54 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~-------------------~~~~~-------~~~~~~~~~~~~~i~~~l~~~p   54 (90)
                      ++|+|++|.+||.+.+.......+...                   ..+..       ..+...++++.+++.+||..||
T Consensus       231 il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  310 (394)
T 4e7w_A          231 VMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTP  310 (394)
T ss_dssp             HHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSG
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCCh
Confidence            468999999999998876665554321                   00000       0123478999999999999999


Q ss_pred             CCCCCHHHHhcCccccccCC
Q psy10832         55 LQRATAAELLQHPFLRQAGP   74 (90)
Q Consensus        55 ~~R~~~~~l~~~~~~~~~~~   74 (90)
                      .+|+++.+++.||||+....
T Consensus       311 ~~R~t~~e~l~hp~f~~~~~  330 (394)
T 4e7w_A          311 SARLTAIEALCHPFFDELRT  330 (394)
T ss_dssp             GGSCCHHHHHTSGGGSTTTS
T ss_pred             hhCCCHHHHhcChhhhhhcc
Confidence            99999999999999997654

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.36  E-value=5.5e-13  Score=75.81  Aligned_cols=73  Identities=25%  Similarity=0.482  Sum_probs=58.3

Q ss_pred             CEEeeecCCCCCCC-CCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFN-EPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      ++|+|++|..||.. .........+.....+..+....++.++.+++..||..||.+||++.+++.|+||....
T Consensus       218 il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~  291 (318)
T 2dyl_A          218 SLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKRYE  291 (318)
T ss_dssp             HHHHHHHSSCTTTTCCSHHHHHHHHHHSCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHHHH
T ss_pred             HHHHHHhCCCCCCCCCccHHHHHHHhccCCCCCCccCCCCHHHHHHHHHHccCChhHCcCHHHHhhCHHHHhcc
Confidence            36899999999987 45555566665554444444456899999999999999999999999999999998754

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.36  E-value=3.1e-13  Score=79.91  Aligned_cols=75  Identities=16%  Similarity=0.370  Sum_probs=60.4

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCC-CCCCCCCCCCCHHHHHHHHHhhccCCCC--CCCHHHHhcCccccccCCC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMP-PPKLKNTHKVSPRLQGFLERLLVRDPLQ--RATAAELLQHPFLRQAGPP   75 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~i~~~l~~~p~~--R~~~~~l~~~~~~~~~~~~   75 (90)
                      ++|+|++|.+||.+.+.......+.... ...++.+..++.+++++|.+||..+|.+  |+++.++++|+||++..+.
T Consensus       262 ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~f~~~~w~  339 (410)
T 3v8s_A          262 FLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQWA  339 (410)
T ss_dssp             HHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTSGGGCCSSCC
T ss_pred             HHHHHHhCCCCCCCCChhhHHHHHHhccccccCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcCccccCCCHH
Confidence            4689999999999998888877776532 1233334568999999999999988887  9999999999999986543

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.36  E-value=1.9e-13  Score=77.65  Aligned_cols=81  Identities=23%  Similarity=0.361  Sum_probs=54.7

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcC---------------------CCCCCC-------CCCCCCHHHHHHHHHhhcc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDM---------------------PPPKLK-------NTHKVSPRLQGFLERLLVR   52 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~---------------------~~~~~~-------~~~~~~~~~~~~i~~~l~~   52 (90)
                      ++|+|++|..||.+.........+...                     ..+...       ....++.++.+++.+||..
T Consensus       192 il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  271 (311)
T 4agu_A          192 VFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHM  271 (311)
T ss_dssp             HHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCS
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccC
Confidence            368899999999998766554443210                     000000       0135788999999999999


Q ss_pred             CCCCCCCHHHHhcCccccccCCCcccHHH
Q psy10832         53 DPLQRATAAELLQHPFLRQAGPPALLVPL   81 (90)
Q Consensus        53 ~p~~R~~~~~l~~~~~~~~~~~~~~~~~~   81 (90)
                      ||.+||++.++++||||+...........
T Consensus       272 dP~~Rpt~~ell~hp~f~~~~~~~~~~~~  300 (311)
T 4agu_A          272 DPTERLTCEQLLHHPYFENIREIEDLAKE  300 (311)
T ss_dssp             STTTSCCHHHHHTSGGGTTCC--------
T ss_pred             ChhhcCCHHHHhcChHHHhccCHHHHHHh
Confidence            99999999999999999987766544443

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.36  E-value=4.3e-13  Score=75.75  Aligned_cols=74  Identities=27%  Similarity=0.441  Sum_probs=58.6

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCC-CCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPP-KLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGP   74 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~   74 (90)
                      ++|+|++|..||.+.+.......+...... ....+..++..+.+++.+||..||.+||++.++++|+||.....
T Consensus       218 ~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~~  292 (298)
T 1phk_A          218 IMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYVV  292 (298)
T ss_dssp             HHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCTTC-
T ss_pred             HHHHHHHCCCCCcCccHHHHHHHHhcCCcccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHhChHhhhccc
Confidence            368899999999998877777666655331 11222457899999999999999999999999999999997653

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.36  E-value=2.7e-13  Score=79.29  Aligned_cols=73  Identities=23%  Similarity=0.409  Sum_probs=55.7

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcC-CCCCC-------------------------------------------CCCC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDM-PPPKL-------------------------------------------KNTH   36 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~-~~~~~-------------------------------------------~~~~   36 (90)
                      ++|+|++|.+||.+.+....+..+... ..|..                                           ..+.
T Consensus       220 il~ell~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (388)
T 3oz6_A          220 ILGEILCGKPIFPGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKA  299 (388)
T ss_dssp             HHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTC
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccc
Confidence            468999999999998877766655421 00000                                           0112


Q ss_pred             CCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832         37 KVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus        37 ~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      ..++++.+|+.+||..||.+|+++.++++||||....
T Consensus       300 ~~~~~~~dll~~~L~~dP~~R~t~~e~l~Hp~~~~~~  336 (388)
T 3oz6_A          300 DCNEEALDLLDKLLQFNPNKRISANDALKHPFVSIFH  336 (388)
T ss_dssp             CCCHHHHHHHHHHCCSSGGGSCCHHHHTTSTTTTTTC
T ss_pred             cCCHHHHHHHHHhhccCcccCCCHHHHhCCHHHHHhc
Confidence            5688999999999999999999999999999998654

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.36  E-value=7.6e-13  Score=75.30  Aligned_cols=76  Identities=28%  Similarity=0.445  Sum_probs=52.3

Q ss_pred             CEEeeecCCCCCCCCC---------------HHHHHHHhhcCCCCCC-CCCCCCCHHHHHHHHHhhccCCCCCCCHHHHh
Q psy10832          1 MVVEMVDGEPPFFNEP---------------PLQAMRRIRDMPPPKL-KNTHKVSPRLQGFLERLLVRDPLQRATAAELL   64 (90)
Q Consensus         1 il~~~~~g~~p~~~~~---------------~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~   64 (90)
                      ++|+|++|..||.+..               .......+........ ..+..++.++++++.+||..||.+|+++.+++
T Consensus       215 il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l  294 (316)
T 2ac3_A          215 ILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVL  294 (316)
T ss_dssp             HHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHH
T ss_pred             HHHHHHHCCCCCcccccccccccccccchhHHHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHh
Confidence            3689999999998753               2233444544422111 11135789999999999999999999999999


Q ss_pred             cCccccccCCCc
Q psy10832         65 QHPFLRQAGPPA   76 (90)
Q Consensus        65 ~~~~~~~~~~~~   76 (90)
                      +||||++.....
T Consensus       295 ~hp~~~~~~~~~  306 (316)
T 2ac3_A          295 QHPWVQGCAPEN  306 (316)
T ss_dssp             HSTTCC------
T ss_pred             cChhhcCCCCcc
Confidence            999999765443

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.36  E-value=4.3e-13  Score=76.95  Aligned_cols=74  Identities=20%  Similarity=0.339  Sum_probs=55.1

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcC--CCCCCCC-------------------------CCCCCHHHHHHHHHhhccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDM--PPPKLKN-------------------------THKVSPRLQGFLERLLVRD   53 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~--~~~~~~~-------------------------~~~~~~~~~~~i~~~l~~~   53 (90)
                      ++|+|++|..||.+.........+...  .+.....                         ...+++++.+||.+||..|
T Consensus       227 il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  306 (329)
T 3gbz_A          227 IWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMD  306 (329)
T ss_dssp             HHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSS
T ss_pred             HHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCC
Confidence            368999999999998877666555421  0000000                         0116789999999999999


Q ss_pred             CCCCCCHHHHhcCccccccCC
Q psy10832         54 PLQRATAAELLQHPFLRQAGP   74 (90)
Q Consensus        54 p~~R~~~~~l~~~~~~~~~~~   74 (90)
                      |.+|+++.++++||||++...
T Consensus       307 P~~R~t~~e~l~hp~f~~~~~  327 (329)
T 3gbz_A          307 PVKRISAKNALEHPYFSHNDF  327 (329)
T ss_dssp             GGGSCCHHHHHTSGGGSSSCS
T ss_pred             hhhCCCHHHHhCCcccCCCCC
Confidence            999999999999999997653

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.36  E-value=3.2e-13  Score=78.97  Aligned_cols=70  Identities=26%  Similarity=0.422  Sum_probs=59.7

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCH----HHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA----AELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~----~~l~~~~~~~~~~   73 (90)
                      ++|+|++|..||.+.+.......+...   ....+..++.+++++|.+||..||.+|+++    .+++.|+||.+..
T Consensus       228 il~ell~G~~Pf~~~~~~~~~~~i~~~---~~~~~~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i~~h~~f~~~~  301 (373)
T 2r5t_A          228 VLYEMLYGLPPFYSRNTAEMYDNILNK---PLQLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSLIN  301 (373)
T ss_dssp             HHHHHHHSSCTTCCSBHHHHHHHHHHS---CCCCCSSSCHHHHHHHHHHTCSSGGGSTTTTTTHHHHHTSGGGTTCC
T ss_pred             HHHHHHcCCCCCCCCCHHHHHHHHHhc---ccCCCCCCCHHHHHHHHHHcccCHHhCCCCCCCHHHHhCCccccCCC
Confidence            468999999999999888888888776   333456789999999999999999999985    6999999998754

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.35  E-value=2.6e-13  Score=78.94  Aligned_cols=70  Identities=29%  Similarity=0.513  Sum_probs=56.7

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCC-CCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCcccc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPP-KLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLR   70 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~   70 (90)
                      ++|+|++|..||.+.........+..+... ..+.+...+..+.+++.+||..||.+|+++.++++||||+
T Consensus       294 il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~f~  364 (365)
T 2y7j_A          294 ILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFE  364 (365)
T ss_dssp             HHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGC
T ss_pred             HHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCcccC
Confidence            368999999999998877777766655321 1122246789999999999999999999999999999996

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.35  E-value=2.8e-13  Score=77.38  Aligned_cols=78  Identities=26%  Similarity=0.396  Sum_probs=56.3

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhc--CCCCC-----------------------------CCCCCCCCHHHHHHHHHh
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRD--MPPPK-----------------------------LKNTHKVSPRLQGFLERL   49 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~--~~~~~-----------------------------~~~~~~~~~~~~~~i~~~   49 (90)
                      ++|+|++|..||.+.+.......+..  +.+..                             ...+..++.++.+|+.+|
T Consensus       198 il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  277 (317)
T 2pmi_A          198 ILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGL  277 (317)
T ss_dssp             HHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHH
T ss_pred             HHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHH
Confidence            36899999999999887766555432  10000                             001125688999999999


Q ss_pred             hccCCCCCCCHHHHhcCccccccCCCccc
Q psy10832         50 LVRDPLQRATAAELLQHPFLRQAGPPALL   78 (90)
Q Consensus        50 l~~~p~~R~~~~~l~~~~~~~~~~~~~~~   78 (90)
                      |..||.+|+++.++++||||.........
T Consensus       278 L~~dP~~Rpt~~e~l~hp~f~~~~~~~~~  306 (317)
T 2pmi_A          278 LQLNPDMRLSAKQALHHPWFAEYYHHASM  306 (317)
T ss_dssp             SCSSGGGSCCHHHHTTSGGGGGGCC----
T ss_pred             CCCCcccCCCHHHHhCChhhhcccchhhc
Confidence            99999999999999999999987665433

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.35  E-value=3.6e-13  Score=77.23  Aligned_cols=71  Identities=17%  Similarity=0.308  Sum_probs=52.4

Q ss_pred             CEEeeecCCCCCCCCCHHHH-HHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCcccccc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQA-MRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQA   72 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~   72 (90)
                      ++|+|++|..||.+...... ........ .....+..++..+.+++.+||..||.+|+++.++++|+||...
T Consensus       197 il~~ll~g~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~  268 (323)
T 3tki_A          197 VLTAMLAGELPWDQPSDSCQEYSDWKEKK-TYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKP  268 (323)
T ss_dssp             HHHHHHHSSCSCSSSCTTSHHHHHHHTTC-TTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCC
T ss_pred             HHHHHHhCCCCCCCCchHHHHHHHHhccc-ccCCccccCCHHHHHHHHHHccCChhhCcCHHHHhhChhhccc
Confidence            36899999999987544322 22222221 1222235679999999999999999999999999999999864

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.35  E-value=7.8e-13  Score=75.12  Aligned_cols=72  Identities=24%  Similarity=0.394  Sum_probs=53.2

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcC--CCCCCC----------------------CCCCCCHHHHHHHHHhhccCCCC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDM--PPPKLK----------------------NTHKVSPRLQGFLERLLVRDPLQ   56 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~--~~~~~~----------------------~~~~~~~~~~~~i~~~l~~~p~~   56 (90)
                      ++|+|++|.+||.+.+.......+...  .++...                      ....+++++.++|.+||..||.+
T Consensus       208 il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  287 (308)
T 3g33_A          208 IFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHK  287 (308)
T ss_dssp             HHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTT
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCcc
Confidence            368999999999998877766665421  100000                      11357889999999999999999


Q ss_pred             CCCHHHHhcCcccccc
Q psy10832         57 RATAAELLQHPFLRQA   72 (90)
Q Consensus        57 R~~~~~l~~~~~~~~~   72 (90)
                      |+++.++++|+||+..
T Consensus       288 R~t~~e~l~h~~~~~~  303 (308)
T 3g33_A          288 RISAFRALQHSYLHKD  303 (308)
T ss_dssp             SCCHHHHHTSTTC---
T ss_pred             CCCHHHHhcCccccCC
Confidence            9999999999999864

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.34  E-value=5.9e-13  Score=76.62  Aligned_cols=74  Identities=20%  Similarity=0.252  Sum_probs=56.3

Q ss_pred             CEEeeecCCCCCCCCCH-HHHHHHhhcCCCCCCC----------------CCCCCCHHHHHHHHHhhccCCCCCCCHHHH
Q psy10832          1 MVVEMVDGEPPFFNEPP-LQAMRRIRDMPPPKLK----------------NTHKVSPRLQGFLERLLVRDPLQRATAAEL   63 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~-~~~~~~i~~~~~~~~~----------------~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l   63 (90)
                      ++|+|++|..||..... ......+.........                ....++.++.+++..||..||.+||++.++
T Consensus       241 il~~l~~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~  320 (348)
T 2pml_X          241 CLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDA  320 (348)
T ss_dssp             HHHHHHHSSCSSCCSSCSHHHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHH
T ss_pred             HHHHHHhCCCCCCCCCcHHHHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHH
Confidence            36899999999998655 5666666554321110                014578999999999999999999999999


Q ss_pred             hcCccccccCC
Q psy10832         64 LQHPFLRQAGP   74 (90)
Q Consensus        64 ~~~~~~~~~~~   74 (90)
                      ++|+||.....
T Consensus       321 l~hp~f~~~~~  331 (348)
T 2pml_X          321 LKHEWLADTNI  331 (348)
T ss_dssp             HTSGGGTTCCH
T ss_pred             hcCccccCCCH
Confidence            99999997653

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.34  E-value=4.2e-13  Score=75.02  Aligned_cols=73  Identities=18%  Similarity=0.301  Sum_probs=53.4

Q ss_pred             CEEeeecCCCCCCCCCHH-HHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCC
Q psy10832          1 MVVEMVDGEPPFFNEPPL-QAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGP   74 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~   74 (90)
                      ++|+|++|..||...... .....+.... .....+..++..+.+++..||..||.+||++.++++|+||.....
T Consensus       197 il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~  270 (276)
T 2yex_A          197 VLTAMLAGELPWDQPSDSCQEYSDWKEKK-TYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPLK  270 (276)
T ss_dssp             HHHHHHHSSCCCSCSCTTSHHHHHHHTTC-TTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCCCC
T ss_pred             HHHHHHhCCCCCCCCchHHHHHHHhhhcc-cccCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcCccccChhh
Confidence            368899999999875432 2222222221 122223467999999999999999999999999999999986543

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.34  E-value=4.7e-13  Score=74.96  Aligned_cols=73  Identities=29%  Similarity=0.439  Sum_probs=58.8

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCC-CCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKL-KNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      ++|+|++|..||.+.........+........ ..+..+++.+.+++..||..||.+|+++.++++|+||+...
T Consensus       196 ~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~  269 (277)
T 3f3z_A          196 MMYVLLCGYPPFSAPTDSEVMLKIREGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFEKQL  269 (277)
T ss_dssp             HHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHHHH
T ss_pred             HHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhccc
Confidence            36889999999999888877777766633211 11236789999999999999999999999999999998643

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.34  E-value=7.2e-13  Score=76.72  Aligned_cols=70  Identities=24%  Similarity=0.440  Sum_probs=53.9

Q ss_pred             CEEeeecCCCCCCCC---------CHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCH------HHHhc
Q psy10832          1 MVVEMVDGEPPFFNE---------PPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA------AELLQ   65 (90)
Q Consensus         1 il~~~~~g~~p~~~~---------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~------~~l~~   65 (90)
                      ++|+|++|..||...         ........+...   ....+..++.+++++|.+||..||.+|+++      .+++.
T Consensus       199 il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~---~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~  275 (345)
T 3a8x_A          199 LMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK---QIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQG  275 (345)
T ss_dssp             HHHHHHHSSCTTTTTTC-------CHHHHHHHHHHC---CCCCCTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHT
T ss_pred             HHHHHHhCCCCcCCcccccccccccHHHHHHHHHcC---CCCCCCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhc
Confidence            468999999999752         233344445544   233456789999999999999999999984      89999


Q ss_pred             CccccccC
Q psy10832         66 HPFLRQAG   73 (90)
Q Consensus        66 ~~~~~~~~   73 (90)
                      ||||.+..
T Consensus       276 hp~f~~~~  283 (345)
T 3a8x_A          276 HPFFRNVD  283 (345)
T ss_dssp             SGGGTTCC
T ss_pred             CCccCCCC
Confidence            99998754

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.34  E-value=4.1e-13  Score=77.24  Aligned_cols=73  Identities=25%  Similarity=0.443  Sum_probs=60.4

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCCCc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPPA   76 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~~~   76 (90)
                      ++|+|++|..||...........+....   ...+..+++.+.+++.+||..||.+|+++.++++|+||.......
T Consensus       230 il~~l~~g~~pf~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~~~~~~~~~~~  302 (335)
T 2owb_A          230 IMYTLLVGKPPFETSCLKETYLRIKKNE---YSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPA  302 (335)
T ss_dssp             HHHHHHHSSCTTCCSSHHHHHHHHHHTC---CCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTSCCCS
T ss_pred             HHHHHHHCcCCCCCCCHHHHHHHHhcCC---CCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCccccCCCccc
Confidence            3689999999999988777766666552   333457899999999999999999999999999999999765443

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.33  E-value=1.2e-12  Score=74.84  Aligned_cols=73  Identities=21%  Similarity=0.418  Sum_probs=59.0

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCC-CCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPP-KLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      ++|+|++|..||.+.........+...... ....+...++.+.++|..||..||.+||++.+++.||||....
T Consensus       207 il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~hp~~~~~~  280 (321)
T 2a2a_A          207 ITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVD  280 (321)
T ss_dssp             HHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHSTTTSCSS
T ss_pred             HHHHHHHCCCCCCCCCHHHHHHHHHhcccccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcCccccCCC
Confidence            368999999999998888777777665321 1111246789999999999999999999999999999998654

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.33  E-value=1.9e-13  Score=76.63  Aligned_cols=70  Identities=21%  Similarity=0.446  Sum_probs=51.0

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      ++|+|++|..||...........+...   ....+..++.++.+++..||..||.+||++.++++|+||....
T Consensus       201 il~~l~~g~~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~  270 (278)
T 3cok_A          201 MFYTLLIGRPPFDTDTVKNTLNKVVLA---DYEMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDHPFMSRNS  270 (278)
T ss_dssp             HHHHHHHSSCSSCCCSCC-----CCSS---CCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSTTTC---
T ss_pred             HHHHHHhCCCCCCChhHHHHHHHHhhc---ccCCccccCHHHHHHHHHHcccCHhhCCCHHHHhcCccccCCC
Confidence            367899999999876544444443333   2334556799999999999999999999999999999998644

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.33  E-value=5.1e-13  Score=75.41  Aligned_cols=73  Identities=25%  Similarity=0.451  Sum_probs=60.5

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCCCc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPPA   76 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~~~   76 (90)
                      ++|+|++|..||.+.........+...   ....+..+++.+.+++..||..||.+||++.++++|+||.......
T Consensus       204 ~l~~l~~g~~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~~~~  276 (294)
T 2rku_A          204 IMYTLLVGKPPFETSCLKETYLRIKKN---EYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPA  276 (294)
T ss_dssp             HHHHHHHSSCTTCCSSHHHHHHHHHTT---CCCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTSCCCS
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHhhc---cCCCccccCHHHHHHHHHHcccChhhCcCHHHHhhChheecCCcCC
Confidence            368899999999998877776666655   2334557899999999999999999999999999999999765443

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.33  E-value=8.1e-13  Score=75.45  Aligned_cols=75  Identities=35%  Similarity=0.667  Sum_probs=59.9

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCCCc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPPA   76 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~~~   76 (90)
                      ++|+|++|..||.+.........+.....+... ...++..+.++|..||..||.+||++.+++.|+||.......
T Consensus       223 il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~~~~  297 (326)
T 2x7f_A          223 TAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLK-SKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRDQPNER  297 (326)
T ss_dssp             HHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCS-CSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTSHHHHCCTTHH
T ss_pred             HHHHHHhCCCCCCCCcHHHHHHHhhcCccccCC-ccccCHHHHHHHHHHhccChhhCCCHHHHhhChHHhhCcccc
Confidence            368999999999988777666665554333222 356799999999999999999999999999999999765443

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.33  E-value=8.7e-13  Score=76.37  Aligned_cols=75  Identities=27%  Similarity=0.356  Sum_probs=57.3

Q ss_pred             CEEeeecCCCCCCCCCHHH-HHHHhhcCCCC-CCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCCC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQ-AMRRIRDMPPP-KLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPP   75 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~-~~~~i~~~~~~-~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~~   75 (90)
                      ++|+|++|..||.+..... ....+...... ....+..++.++.+++.+||..||.+|+++.++++||||.+....
T Consensus       239 il~ell~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~~~  315 (349)
T 2w4o_A          239 ITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWVTGKAAN  315 (349)
T ss_dssp             HHHHHHHSSCTTCCTTCHHHHHHHHHTTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTTSTTCC
T ss_pred             HHHHHHhCCCCCCCCcccHHHHHHHHhCCCccCCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCCccc
Confidence            3689999999998765433 45555554321 122335689999999999999999999999999999999976543

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.33  E-value=6.8e-13  Score=78.18  Aligned_cols=70  Identities=24%  Similarity=0.427  Sum_probs=54.0

Q ss_pred             CEEeeecCCCCCCCC---------CHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCC------HHHHhc
Q psy10832          1 MVVEMVDGEPPFFNE---------PPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRAT------AAELLQ   65 (90)
Q Consensus         1 il~~~~~g~~p~~~~---------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~------~~~l~~   65 (90)
                      ++|+|++|.+||...         ........+...   ....+..++.+++++|.+||..||.+|++      +.+++.
T Consensus       242 llyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~---~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~  318 (396)
T 4dc2_A          242 LMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK---QIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQG  318 (396)
T ss_dssp             HHHHHHHSSCSSTTTTC------CCHHHHHHHHHHC---CCCCCTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHH
T ss_pred             HHHHHHhCCCCCcccccccccchhhHHHHHHHHhcc---ccCCCCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhc
Confidence            468999999999642         222334445554   34445678999999999999999999998      479999


Q ss_pred             CccccccC
Q psy10832         66 HPFLRQAG   73 (90)
Q Consensus        66 ~~~~~~~~   73 (90)
                      ||||.+..
T Consensus       319 Hpff~~i~  326 (396)
T 4dc2_A          319 HPFFRNVD  326 (396)
T ss_dssp             STTTTTCC
T ss_pred             CccccCCC
Confidence            99998764

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.33  E-value=2.1e-14  Score=82.95  Aligned_cols=69  Identities=25%  Similarity=0.428  Sum_probs=53.4

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCcccccc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQA   72 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~   72 (90)
                      ++|+|++|..||.+.........+...   ....+..+++++.+++.+||..||.+|+++.++++||||...
T Consensus       197 il~~ll~g~~Pf~~~~~~~~~~~i~~~---~~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~  265 (336)
T 3h4j_B          197 VLYVMLVGRLPFDDEFIPNLFKKVNSC---VYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDPWFNVN  265 (336)
T ss_dssp             HHHHHHHSSCSSBCSSSTTCBCCCCSS---CCCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTCHHHHTT
T ss_pred             HHHHHHhCCCCCCCccHHHHHHHHHcC---CCCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhChhhccC
Confidence            368899999999876544332222222   233456689999999999999999999999999999999854

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.33  E-value=1.5e-12  Score=75.88  Aligned_cols=74  Identities=31%  Similarity=0.493  Sum_probs=55.9

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhc--CCCC-------------------------C-CCCCCCCCHHHHHHHHHhhcc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRD--MPPP-------------------------K-LKNTHKVSPRLQGFLERLLVR   52 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~--~~~~-------------------------~-~~~~~~~~~~~~~~i~~~l~~   52 (90)
                      ++|+|++|.+||.+.+....+..+..  +.++                         . .......++.+.+++.+||..
T Consensus       215 il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~  294 (367)
T 1cm8_A          215 IMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVL  294 (367)
T ss_dssp             HHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCS
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccC
Confidence            36899999999999887666555432  1000                         0 011245689999999999999


Q ss_pred             CCCCCCCHHHHhcCccccccCC
Q psy10832         53 DPLQRATAAELLQHPFLRQAGP   74 (90)
Q Consensus        53 ~p~~R~~~~~l~~~~~~~~~~~   74 (90)
                      ||.+|+++.+++.||||.....
T Consensus       295 dP~~R~t~~e~l~hp~f~~~~~  316 (367)
T 1cm8_A          295 DAEQRVTAGEALAHPYFESLHD  316 (367)
T ss_dssp             STTTSCCHHHHHHSGGGTTTC-
T ss_pred             ChhHCCCHHHHhcChHHHhhcC
Confidence            9999999999999999997654

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.33  E-value=6e-13  Score=74.84  Aligned_cols=73  Identities=26%  Similarity=0.494  Sum_probs=55.0

Q ss_pred             CEEeeecCCCCCCC-CCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCC
Q psy10832          1 MVVEMVDGEPPFFN-EPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGP   74 (90)
Q Consensus         1 il~~~~~g~~p~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~   74 (90)
                      ++|+|++|..||.. ...............+... ...++.++.+++..||..||.+||++.++++||||+....
T Consensus       202 il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~hp~f~~~~~  275 (290)
T 3fme_A          202 TMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLP-ADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLHES  275 (290)
T ss_dssp             HHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCCC-TTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHHHH
T ss_pred             HHHHHHHCCCCccccCchHHHHHHHhccCCCCcc-cccCCHHHHHHHHHHhhcChhhCcCHHHHHhCcccccCcc
Confidence            36889999999986 3444444444443322222 3467999999999999999999999999999999986543

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.32  E-value=2.1e-12  Score=75.10  Aligned_cols=71  Identities=21%  Similarity=0.396  Sum_probs=52.5

Q ss_pred             CEEeeecCCCCCCCCC----HHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCcccccc
Q psy10832          1 MVVEMVDGEPPFFNEP----PLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQA   72 (90)
Q Consensus         1 il~~~~~g~~p~~~~~----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~   72 (90)
                      ++|+|++|..||.+..    .......+..... ..+....+++++.++|.+||..||.+|+++.++++|+||...
T Consensus       207 il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~  281 (361)
T 3uc3_A          207 TLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKY-SIPDDIRISPECCHLISRIFVADPATRISIPEIKTHSWFLKN  281 (361)
T ss_dssp             HHHHHHHSSCSCC----CCCHHHHHHHHHTTCC-CCCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTSHHHHTT
T ss_pred             HHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCC-CCCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhCcchhcC
Confidence            3689999999998743    2344444444322 223334679999999999999999999999999999999754

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.32  E-value=7.6e-13  Score=74.75  Aligned_cols=77  Identities=29%  Similarity=0.537  Sum_probs=52.1

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCC-------CCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKL-------KNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~-------~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      ++|+|++|..||.+...............+..       .....++.++.+++..||..||.+||++.++++|+||....
T Consensus       216 il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~  295 (303)
T 2vwi_A          216 TAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAK  295 (303)
T ss_dssp             HHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTSTTC----
T ss_pred             HHHHHHhCCCCCccCchhhHHHHHhccCCCccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhChhhhcCC
Confidence            36899999999998765544433333322111       12345789999999999999999999999999999999776


Q ss_pred             CCcc
Q psy10832         74 PPAL   77 (90)
Q Consensus        74 ~~~~   77 (90)
                      ..+.
T Consensus       296 ~~~~  299 (303)
T 2vwi_A          296 NKEF  299 (303)
T ss_dssp             ----
T ss_pred             CCcc
Confidence            5543

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=99.32  E-value=1.7e-12  Score=73.27  Aligned_cols=75  Identities=24%  Similarity=0.407  Sum_probs=55.6

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcC--CCC---------------CCC---------CCCCCCHHHHHHHHHhhccCC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDM--PPP---------------KLK---------NTHKVSPRLQGFLERLLVRDP   54 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~--~~~---------------~~~---------~~~~~~~~~~~~i~~~l~~~p   54 (90)
                      ++|+|++|..||.+.+.......+...  .+.               ...         ....+++++.+++.+||..||
T Consensus       193 ~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  272 (299)
T 2r3i_A          193 IFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDP  272 (299)
T ss_dssp             HHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSST
T ss_pred             HHHHHHhCCCCCCCccHHHHHHHHHHHhCCCchhhhhHhhcCcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCc
Confidence            368999999999998776665554321  000               000         012468899999999999999


Q ss_pred             CCCCCHHHHhcCccccccCCC
Q psy10832         55 LQRATAAELLQHPFLRQAGPP   75 (90)
Q Consensus        55 ~~R~~~~~l~~~~~~~~~~~~   75 (90)
                      .+|+++.+++.|+||.+....
T Consensus       273 ~~Rpt~~~~l~hp~~~~~~~~  293 (299)
T 2r3i_A          273 NKRISAKAALAHPFFQDVTKP  293 (299)
T ss_dssp             TTSCCHHHHHTSGGGTTCCCC
T ss_pred             ccCCCHHHHhcChhhhcCCCC
Confidence            999999999999999975543

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.32  E-value=1.5e-12  Score=75.07  Aligned_cols=72  Identities=28%  Similarity=0.406  Sum_probs=54.4

Q ss_pred             CEEeeecCCCCCCCC-CHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNE-PPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      ++|+|++|..||... ........+..... ....+...+.++.+++.+||..||.+||++.+++.||||+...
T Consensus       209 il~ell~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~~  281 (343)
T 3dbq_A          209 ILYYMTYGKTPFQQIINQISKLHAIIDPNH-EIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT  281 (343)
T ss_dssp             HHHHHHHSSCTTTTCCSHHHHHHHHHCTTS-CCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSCC
T ss_pred             HHHHHHhCCCcchhhhhHHHHHHHHhcCCc-ccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCccccccC
Confidence            368999999999874 33334444433321 3334556688999999999999999999999999999998543

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.31  E-value=2.4e-13  Score=79.37  Aligned_cols=34  Identities=26%  Similarity=0.476  Sum_probs=30.3

Q ss_pred             HHHHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832         40 PRLQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus        40 ~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      +++.+||.+||..||.+|+++.++++||||+...
T Consensus       347 ~~~~dli~~mL~~dP~~Rpta~e~L~hp~f~~~~  380 (382)
T 2vx3_A          347 LKFKDLILRMLDYDPKTRIQPYYALQHSFFKKTA  380 (382)
T ss_dssp             HHHHHHHHHHTCSCTTTSCCHHHHTTSGGGCC--
T ss_pred             HHHHHHHHHhcCCChhhCCCHHHHhcCcccccCC
Confidence            3789999999999999999999999999998654

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.31  E-value=1.5e-12  Score=76.46  Aligned_cols=72  Identities=28%  Similarity=0.406  Sum_probs=55.0

Q ss_pred             CEEeeecCCCCCCCC-CHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNE-PPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      ++|+|++|..||.+. ........+..... ....+...+.++.++|.+||..||.+||++.++++|+||....
T Consensus       256 il~ell~G~~Pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~~~  328 (390)
T 2zmd_A          256 ILYYMTYGKTPFQQIINQISKLHAIIDPNH-EIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT  328 (390)
T ss_dssp             HHHHHHHSSCTTTTCCCHHHHHHHHHCTTS-CCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSCC
T ss_pred             HHHHHHHCCCcchhhhHHHHHHHHHhCccc-cCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhCcCccccC
Confidence            468999999999875 33344444444322 2333455689999999999999999999999999999998643

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.31  E-value=2.3e-12  Score=74.47  Aligned_cols=74  Identities=28%  Similarity=0.419  Sum_probs=55.2

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcC---------------------------CCC-CCCCCCCCCHHHHHHHHHhhcc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDM---------------------------PPP-KLKNTHKVSPRLQGFLERLLVR   52 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~---------------------------~~~-~~~~~~~~~~~~~~~i~~~l~~   52 (90)
                      ++|+|++|..||.+.+.......+...                           ... .......+++++.+++.+||..
T Consensus       213 il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  292 (353)
T 3coi_A          213 IMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLEL  292 (353)
T ss_dssp             HHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCS
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCC
Confidence            368999999999988766554443220                           000 0112245789999999999999


Q ss_pred             CCCCCCCHHHHhcCccccccCC
Q psy10832         53 DPLQRATAAELLQHPFLRQAGP   74 (90)
Q Consensus        53 ~p~~R~~~~~l~~~~~~~~~~~   74 (90)
                      ||.+|+++.+++.||||.....
T Consensus       293 dp~~Rpt~~e~l~hp~f~~~~~  314 (353)
T 3coi_A          293 DVDKRLTAAQALTHPFFEPFRD  314 (353)
T ss_dssp             CTTTSCCHHHHHTSGGGTTTCC
T ss_pred             CcccCCCHHHHhcCcchhhccC
Confidence            9999999999999999987543

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.31  E-value=4e-13  Score=77.81  Aligned_cols=71  Identities=23%  Similarity=0.416  Sum_probs=54.3

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCC-CCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCcccccc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPP-KLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQA   72 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~   72 (90)
                      ++|+|++|..||.+.. ......+...... ....+..++.+++++|.+||..||.+|+++.++++|+||...
T Consensus       222 il~~ll~g~~pf~~~~-~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~  293 (351)
T 3c0i_A          222 ILFILLSGCLPFYGTK-ERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKER  293 (351)
T ss_dssp             HHHHHHHSSCSSCSSH-HHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTH
T ss_pred             HHHHHHHCCCCCCCcH-HHHHHHHHcCCCCCCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcChhhcCC
Confidence            4689999999998854 3444555544321 112224679999999999999999999999999999999863

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.31  E-value=3.8e-12  Score=72.66  Aligned_cols=74  Identities=23%  Similarity=0.388  Sum_probs=56.4

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcC--CC----------------------CCCCCCCCCCHHHHHHHHHhhccCCCC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDM--PP----------------------PKLKNTHKVSPRLQGFLERLLVRDPLQ   56 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~--~~----------------------~~~~~~~~~~~~~~~~i~~~l~~~p~~   56 (90)
                      ++|+|++|..||.+.........+...  .+                      +.......++..+.+++.+||..||.+
T Consensus       208 il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  287 (326)
T 1blx_A          208 IFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAK  287 (326)
T ss_dssp             HHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTT
T ss_pred             HHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCccc
Confidence            368999999999998777665555421  00                      001122457899999999999999999


Q ss_pred             CCCHHHHhcCccccccCC
Q psy10832         57 RATAAELLQHPFLRQAGP   74 (90)
Q Consensus        57 R~~~~~l~~~~~~~~~~~   74 (90)
                      |+++.+++.|+||.....
T Consensus       288 Rpt~~e~l~hp~~~~~~~  305 (326)
T 1blx_A          288 RISAYSALSHPYFQDLER  305 (326)
T ss_dssp             SCCHHHHHTSGGGTTCCC
T ss_pred             CCCHHHHhcCccccccch
Confidence            999999999999997653

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.30  E-value=1.1e-13  Score=79.40  Aligned_cols=83  Identities=28%  Similarity=0.397  Sum_probs=58.8

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcC---------------------CCCCCC-------CCCCCCHHHHHHHHHhhcc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDM---------------------PPPKLK-------NTHKVSPRLQGFLERLLVR   52 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~---------------------~~~~~~-------~~~~~~~~~~~~i~~~l~~   52 (90)
                      ++|+|++|..||.+.........+...                     ..+...       ....+++.+.+++.+||..
T Consensus       214 il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~  293 (331)
T 4aaa_A          214 LVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHI  293 (331)
T ss_dssp             HHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCS
T ss_pred             HHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhcc
Confidence            368999999999998766555443210                     000000       1125689999999999999


Q ss_pred             CCCCCCCHHHHhcCccccccCCCcccHHHHh
Q psy10832         53 DPLQRATAAELLQHPFLRQAGPPALLVPLMK   83 (90)
Q Consensus        53 ~p~~R~~~~~l~~~~~~~~~~~~~~~~~~~~   83 (90)
                      ||.+||++.++++|+||+.....+.+...++
T Consensus       294 dP~~Rpt~~ell~hp~f~~~~~~~~~~~~~~  324 (331)
T 4aaa_A          294 DPDKRPFCAELLHHDFFQMDGFAERFSQELQ  324 (331)
T ss_dssp             SGGGSCCGGGGGGSHHHHGGGHHHHHHHHHH
T ss_pred             CcccCCCHHHHhcCchhccCChhhhhhHHHh
Confidence            9999999999999999997654444444333

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.30  E-value=1.2e-12  Score=76.26  Aligned_cols=73  Identities=29%  Similarity=0.450  Sum_probs=54.9

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCC-CC------------------------CC---CCCCCCCHHHHHHHHHhhcc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMP-PP------------------------KL---KNTHKVSPRLQGFLERLLVR   52 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~-~~------------------------~~---~~~~~~~~~~~~~i~~~l~~   52 (90)
                      ++|+|++|..||.+.+.......+.... .+                        ..   ..+..+++++.+||.+||..
T Consensus       231 il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  310 (371)
T 4exu_A          231 IMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLEL  310 (371)
T ss_dssp             HHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCS
T ss_pred             HHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCC
Confidence            3689999999999987666555543210 00                        00   01235689999999999999


Q ss_pred             CCCCCCCHHHHhcCccccccC
Q psy10832         53 DPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus        53 ~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      ||.+|+++.++++||||....
T Consensus       311 dP~~Rpt~~ell~hp~f~~~~  331 (371)
T 4exu_A          311 DVDKRLTAAQALTHPFFEPFR  331 (371)
T ss_dssp             CTTTSCCHHHHHTSGGGTTTC
T ss_pred             ChhhcCCHHHHhcCcccccCC
Confidence            999999999999999998654

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.30  E-value=9.1e-13  Score=77.96  Aligned_cols=74  Identities=22%  Similarity=0.342  Sum_probs=55.5

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcC--------------CCCCCC------------CCCCCCHHHHHHHHHhhccCC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDM--------------PPPKLK------------NTHKVSPRLQGFLERLLVRDP   54 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~--------------~~~~~~------------~~~~~~~~~~~~i~~~l~~~p   54 (90)
                      ++|||++|.+||.+.+....+..+...              ....+.            .+...++++.+||.+||..||
T Consensus       246 il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP  325 (420)
T 1j1b_A          246 VLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTP  325 (420)
T ss_dssp             HHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSG
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCCh
Confidence            468999999999998776655544320              000111            123468999999999999999


Q ss_pred             CCCCCHHHHhcCccccccCC
Q psy10832         55 LQRATAAELLQHPFLRQAGP   74 (90)
Q Consensus        55 ~~R~~~~~l~~~~~~~~~~~   74 (90)
                      .+|+++.+++.|+||.....
T Consensus       326 ~~R~t~~e~l~hp~f~~~~~  345 (420)
T 1j1b_A          326 TARLTPLEACAHSFFDELRD  345 (420)
T ss_dssp             GGSCCHHHHHTSGGGGGGGC
T ss_pred             hHCCCHHHHhCCHhhccccc
Confidence            99999999999999987543

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.30  E-value=4.6e-13  Score=78.23  Aligned_cols=73  Identities=25%  Similarity=0.400  Sum_probs=55.7

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcC-CC------------------CCC-------CCCCCCCHHHHHHHHHhhccCC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDM-PP------------------PKL-------KNTHKVSPRLQGFLERLLVRDP   54 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~-~~------------------~~~-------~~~~~~~~~~~~~i~~~l~~~p   54 (90)
                      ++|+|++|.+||.+.+.......+... ..                  +..       ..+...++++.+++.+||..||
T Consensus       231 il~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  310 (383)
T 3eb0_A          231 VFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEP  310 (383)
T ss_dssp             HHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSG
T ss_pred             HHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCCh
Confidence            368999999999998877766555420 00                  000       0234578899999999999999


Q ss_pred             CCCCCHHHHhcCccccccC
Q psy10832         55 LQRATAAELLQHPFLRQAG   73 (90)
Q Consensus        55 ~~R~~~~~l~~~~~~~~~~   73 (90)
                      .+|+++.+++.||||+...
T Consensus       311 ~~R~t~~e~l~hp~f~~~~  329 (383)
T 3eb0_A          311 DLRINPYEAMAHPFFDHLR  329 (383)
T ss_dssp             GGSCCHHHHHTSGGGHHHH
T ss_pred             hhCCCHHHHhcCHHHHHHH
Confidence            9999999999999998643

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.30  E-value=8.6e-13  Score=76.94  Aligned_cols=74  Identities=27%  Similarity=0.442  Sum_probs=55.4

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcC--CC-----------------------CCC---CCCCCCCHHHHHHHHHhhcc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDM--PP-----------------------PKL---KNTHKVSPRLQGFLERLLVR   52 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~--~~-----------------------~~~---~~~~~~~~~~~~~i~~~l~~   52 (90)
                      ++|+|++|.+||.+.+....+..+...  .+                       +..   ......++.+.+||.+||..
T Consensus       219 il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~  298 (367)
T 2fst_X          219 IMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVL  298 (367)
T ss_dssp             HHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCS
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCC
Confidence            368999999999998876665554321  00                       000   01124678999999999999


Q ss_pred             CCCCCCCHHHHhcCccccccCC
Q psy10832         53 DPLQRATAAELLQHPFLRQAGP   74 (90)
Q Consensus        53 ~p~~R~~~~~l~~~~~~~~~~~   74 (90)
                      ||.+|+++.+++.||||.....
T Consensus       299 dP~~R~t~~e~L~hp~~~~~~~  320 (367)
T 2fst_X          299 DSDKRITAAQALAHAYFAQYHD  320 (367)
T ss_dssp             SGGGSCCHHHHHTSGGGTTTCC
T ss_pred             CcccCcCHHHHhcChhhhhccC
Confidence            9999999999999999997653

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.29  E-value=4.3e-12  Score=71.61  Aligned_cols=37  Identities=35%  Similarity=0.574  Sum_probs=33.8

Q ss_pred             CCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832         37 KVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus        37 ~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      .++.++++++.+||..||.+|+++.++++||||.+..
T Consensus       254 ~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~  290 (292)
T 3o0g_A          254 KLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFC  290 (292)
T ss_dssp             TCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTC-
T ss_pred             ccChHHHHHHHHHhccChhhCCCHHHHhcCcccccCC
Confidence            4789999999999999999999999999999998653

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.29  E-value=5.8e-13  Score=79.72  Aligned_cols=73  Identities=21%  Similarity=0.328  Sum_probs=53.2

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCC-CCC--------------------CC-------CCCC-----------CCHH
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMP-PPK--------------------LK-------NTHK-----------VSPR   41 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~-~~~--------------------~~-------~~~~-----------~~~~   41 (90)
                      ++|+|++|.+||.+.+....+..+.... .+.                    ..       .+..           .+++
T Consensus       252 il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~  331 (464)
T 3ttj_A          252 IMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQ  331 (464)
T ss_dssp             HHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHH
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHH
Confidence            4689999999999988776665554310 000                    00       0000           1467


Q ss_pred             HHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832         42 LQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus        42 ~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      +++||.+||..||.+|+++.++++||||....
T Consensus       332 ~~dLl~~mL~~dP~~R~ta~e~L~Hp~~~~~~  363 (464)
T 3ttj_A          332 ARDLLSKMLVIDPAKRISVDDALQHPYINVWY  363 (464)
T ss_dssp             HHHHHHHHSCSSTTTSCCHHHHHTSTTTGGGC
T ss_pred             HHHHHHHHcCCChhhCCCHHHHhcChhhhhcc
Confidence            89999999999999999999999999998654

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.29  E-value=8.9e-13  Score=76.55  Aligned_cols=73  Identities=23%  Similarity=0.398  Sum_probs=53.5

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhc--CCCC-----------------------C---CCCCCCCCHHHHHHHHHhhcc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRD--MPPP-----------------------K---LKNTHKVSPRLQGFLERLLVR   52 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~--~~~~-----------------------~---~~~~~~~~~~~~~~i~~~l~~   52 (90)
                      ++|+|++|.+||.+.+.......+..  +.++                       .   ......++.++.+++.+||..
T Consensus       221 il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  300 (364)
T 3qyz_A          221 ILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTF  300 (364)
T ss_dssp             HHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCS
T ss_pred             HHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCC
Confidence            36899999999998765544444321  0000                       0   001235689999999999999


Q ss_pred             CCCCCCCHHHHhcCccccccC
Q psy10832         53 DPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus        53 ~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      ||.+|+++.++++||||....
T Consensus       301 dP~~R~t~~e~l~hp~~~~~~  321 (364)
T 3qyz_A          301 NPHKRIEVEQALAHPYLEQYY  321 (364)
T ss_dssp             STTTSCCHHHHHTSGGGTTTC
T ss_pred             ChhhCCCHHHHhcCcchhhcc
Confidence            999999999999999999754

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.29  E-value=3.3e-12  Score=73.74  Aligned_cols=73  Identities=18%  Similarity=0.306  Sum_probs=55.0

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcC--CCCCCC-----------------------CCCCCCHHHHHHHHHhhccCCC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDM--PPPKLK-----------------------NTHKVSPRLQGFLERLLVRDPL   55 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~--~~~~~~-----------------------~~~~~~~~~~~~i~~~l~~~p~   55 (90)
                      ++|+|++|.+||.+.+.......+...  .+....                       .....+.++.++|.+||..||.
T Consensus       202 il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  281 (346)
T 1ua2_A          202 ILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPC  281 (346)
T ss_dssp             HHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTT
T ss_pred             HHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChh
Confidence            368999999999998877666555421  110000                       0134578999999999999999


Q ss_pred             CCCCHHHHhcCccccccC
Q psy10832         56 QRATAAELLQHPFLRQAG   73 (90)
Q Consensus        56 ~R~~~~~l~~~~~~~~~~   73 (90)
                      +|+++.++++|+||....
T Consensus       282 ~Rpt~~ell~h~~f~~~~  299 (346)
T 1ua2_A          282 ARITATQALKMKYFSNRP  299 (346)
T ss_dssp             TSCCHHHHHTSGGGTSSS
T ss_pred             hCCCHHHHhcChhhhcCC
Confidence            999999999999998654

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.28  E-value=1.3e-12  Score=77.56  Aligned_cols=36  Identities=36%  Similarity=0.570  Sum_probs=31.5

Q ss_pred             CCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832         38 VSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus        38 ~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      .++.+.+||.+||..||.+|+++.++++||||+...
T Consensus       381 ~~~~~~dli~~~L~~dP~~Rpta~e~L~Hpw~~~~~  416 (429)
T 3kvw_A          381 DDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRRRL  416 (429)
T ss_dssp             CCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTTC---
T ss_pred             chHHHHHHHHHHCCCChhhCCCHHHHhCChhhccCC
Confidence            378899999999999999999999999999999654

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.28  E-value=1.5e-12  Score=75.22  Aligned_cols=74  Identities=24%  Similarity=0.328  Sum_probs=54.9

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCC-CC-------------C---------------CCCCCCCCHHHHHHHHHhhc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMP-PP-------------K---------------LKNTHKVSPRLQGFLERLLV   51 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~-~~-------------~---------------~~~~~~~~~~~~~~i~~~l~   51 (90)
                      ++|+|++|..||.+.+.......+.... .+             .               .......++++.+++.+||.
T Consensus       221 il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  300 (360)
T 3e3p_A          221 IFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQ  300 (360)
T ss_dssp             HHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTC
T ss_pred             HHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhc
Confidence            3689999999999987776655543210 00             0               00112246789999999999


Q ss_pred             cCCCCCCCHHHHhcCccccccCC
Q psy10832         52 RDPLQRATAAELLQHPFLRQAGP   74 (90)
Q Consensus        52 ~~p~~R~~~~~l~~~~~~~~~~~   74 (90)
                      .||.+|+++.++++||||+....
T Consensus       301 ~dP~~Rpt~~e~l~hp~f~~~~~  323 (360)
T 3e3p_A          301 YLPEERMKPYEALCHPYFDELHD  323 (360)
T ss_dssp             SSGGGSCCHHHHTTSGGGGGGGC
T ss_pred             cCccccCCHHHHhcCccccccCC
Confidence            99999999999999999997653

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.28  E-value=1.5e-12  Score=77.55  Aligned_cols=76  Identities=20%  Similarity=0.338  Sum_probs=59.2

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCC--CCCCCCCCCCCHHHHHHHHHhhccCCCC--CCCHHHHhcCccccccCCCc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMP--PPKLKNTHKVSPRLQGFLERLLVRDPLQ--RATAAELLQHPFLRQAGPPA   76 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~~~~~i~~~l~~~p~~--R~~~~~l~~~~~~~~~~~~~   76 (90)
                      ++|||++|.+||.+.+.......+....  .........+++++++||.+||..++..  |++++++++||||.+..+..
T Consensus       270 il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~Hpff~~i~w~~  349 (437)
T 4aw2_A          270 CMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKHPFFSGIDWDN  349 (437)
T ss_dssp             HHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTSGGGTTCCTTT
T ss_pred             HHHHHHhCCCCCCCCChhHHHHhhhhccccccCCcccccCCHHHHHHHHHHhcccccccCCCCHHHHhCCCccCCCCHHH
Confidence            4689999999999998888777775421  1112223458999999999999887777  89999999999999876543

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.28  E-value=1.5e-12  Score=77.05  Aligned_cols=75  Identities=23%  Similarity=0.366  Sum_probs=57.0

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCC--CCCCCCCCCCCHHHHHHHHHhhccCCCCCC---CHHHHhcCccccccCCC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMP--PPKLKNTHKVSPRLQGFLERLLVRDPLQRA---TAAELLQHPFLRQAGPP   75 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~---~~~~l~~~~~~~~~~~~   75 (90)
                      ++|||++|..||.+.+.......+....  ......+..++++++++|.+||. +|.+|+   ++++++.||||.+..+.
T Consensus       259 ilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpff~~i~w~  337 (412)
T 2vd5_A          259 FAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTHPFFFGLDWD  337 (412)
T ss_dssp             HHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGGGTTCCST
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHhcccCcCCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCCCcCCCCHH
Confidence            4689999999999998887777766421  11111235689999999999998 999985   79999999999987654


Q ss_pred             c
Q psy10832         76 A   76 (90)
Q Consensus        76 ~   76 (90)
                      .
T Consensus       338 ~  338 (412)
T 2vd5_A          338 G  338 (412)
T ss_dssp             T
T ss_pred             H
Confidence            3

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.28  E-value=1.2e-12  Score=73.81  Aligned_cols=72  Identities=28%  Similarity=0.471  Sum_probs=51.2

Q ss_pred             CEEeeecCCCCCCCCC-HHHHHHHh-hcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCC
Q psy10832          1 MVVEMVDGEPPFFNEP-PLQAMRRI-RDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGP   74 (90)
Q Consensus         1 il~~~~~g~~p~~~~~-~~~~~~~i-~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~   74 (90)
                      ++|+|++|..||.... ........ ....  ....+..+++++.+++.+||..||.+||++.+++.|+||.....
T Consensus       214 il~~l~~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~  287 (295)
T 2clq_A          214 TIIEMATGKPPFYELGEPQAAMFKVGMFKV--HPEIPESMSAEAKAFILKCFEPDPDKRACANDLLVDEFLKVSSK  287 (295)
T ss_dssp             HHHHHHHTSCTTGGGSSHHHHHHHHHHHCC--CCCCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTSGGGCC---
T ss_pred             HHHHHHHCCCCccCCCchhHHHHhhccccc--cccccccCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhhccc
Confidence            3688999999997643 22222221 1121  22334578999999999999999999999999999999986553

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.27  E-value=2.9e-12  Score=72.60  Aligned_cols=82  Identities=30%  Similarity=0.493  Sum_probs=63.0

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCCC-cccH
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPP-ALLV   79 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~~-~~~~   79 (90)
                      ++|+|++|..||...........+.....+.  .+..++..+.+++..||..||.+||++.++++|+||...... +.+.
T Consensus       208 il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~~~~~~~  285 (303)
T 3a7i_A          208 TAIELARGEPPHSELHPMKVLFLIPKNNPPT--LEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAKKTSYLT  285 (303)
T ss_dssp             HHHHHHHSSCTTTTSCHHHHHHHHHHSCCCC--CCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCHHHHHHCCCGGGGH
T ss_pred             HHHHHccCCCCCCCcCHHHHHHHhhcCCCCC--CccccCHHHHHHHHHHcCCChhhCcCHHHHhhChhhhcCCCccHHHH
Confidence            3689999999999888777766666554332  245679999999999999999999999999999999865433 3344


Q ss_pred             HHHhh
Q psy10832         80 PLMKG   84 (90)
Q Consensus        80 ~~~~~   84 (90)
                      +.+++
T Consensus       286 ~~~~~  290 (303)
T 3a7i_A          286 ELIDR  290 (303)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            44433

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.27  E-value=3.2e-12  Score=72.73  Aligned_cols=72  Identities=28%  Similarity=0.398  Sum_probs=53.7

Q ss_pred             CEEeeecCCCCCCCCC-HHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEP-PLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      ++|+|++|..||.... .......+..... ....+...+.++.+++..||..||.+||++.++++|+||....
T Consensus       228 il~el~~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~~~~~~  300 (313)
T 3cek_A          228 ILYYMTYGKTPFQQIINQISKLHAIIDPNH-EIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT  300 (313)
T ss_dssp             HHHHHHHSSCTTTTCCSHHHHHHHHHCTTS-CCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHCC-
T ss_pred             HHHHHHhCCCchhhHHHHHHHHHHHHhccc-ccCCcccchHHHHHHHHHHccCCcccCcCHHHHhcCccccCCC
Confidence            3689999999998753 3333344433321 2333455689999999999999999999999999999998654

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.27  E-value=2.3e-13  Score=80.43  Aligned_cols=82  Identities=24%  Similarity=0.330  Sum_probs=57.6

Q ss_pred             CEEeeecCCCCCCCCCHH-HHHHHhhcCCCCC-CCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCCCccc
Q psy10832          1 MVVEMVDGEPPFFNEPPL-QAMRRIRDMPPPK-LKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPPALL   78 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~-~~~~~i~~~~~~~-~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~~~~~   78 (90)
                      ++|+|++|.+||.+.... .....+....... ...+..+++.+.+++.+||..||.+|+++.++++||||+........
T Consensus       333 il~~lltg~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~~~~~~~  412 (419)
T 3i6u_A          333 ILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKF  412 (419)
T ss_dssp             HHHHHHHSSCSSCCCSSSCCHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCCHHHHHHH
T ss_pred             HHHHHHHCCCCCCCCcchHHHHHHHhcCCCCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhCCcccCChhHHHHH
Confidence            368999999999865322 2333344432211 12234679999999999999999999999999999999875544444


Q ss_pred             HHHH
Q psy10832         79 VPLM   82 (90)
Q Consensus        79 ~~~~   82 (90)
                      ..++
T Consensus       413 ~~ll  416 (419)
T 3i6u_A          413 QDLL  416 (419)
T ss_dssp             HHHH
T ss_pred             HHHh
Confidence            4433

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.26  E-value=7.9e-13  Score=75.89  Aligned_cols=73  Identities=21%  Similarity=0.362  Sum_probs=53.3

Q ss_pred             CEEeeecCCCCCCCCCH-------HHHHHHhhcCCCC-CCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCcccccc
Q psy10832          1 MVVEMVDGEPPFFNEPP-------LQAMRRIRDMPPP-KLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQA   72 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~-------~~~~~~i~~~~~~-~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~   72 (90)
                      ++|+|++|..||.+.+.       ......+..+... ....+..++++++++|..||..||.+|+++.+++.|+||+..
T Consensus       198 il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h~w~~~~  277 (325)
T 3kn6_A          198 ILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDG  277 (325)
T ss_dssp             HHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTCGGGCTT
T ss_pred             HHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcChhhccC
Confidence            36899999999986432       4455555555321 111123579999999999999999999999999999999875


Q ss_pred             C
Q psy10832         73 G   73 (90)
Q Consensus        73 ~   73 (90)
                      .
T Consensus       278 ~  278 (325)
T 3kn6_A          278 S  278 (325)
T ss_dssp             C
T ss_pred             c
Confidence            4

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.26  E-value=5e-12  Score=70.79  Aligned_cols=71  Identities=20%  Similarity=0.320  Sum_probs=59.5

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      ++|+|++|..||...+.......+..+..+  ..+..++.++.+++..||..||.+||++.+++.|+|+....
T Consensus       205 il~~l~~g~~p~~~~~~~~~~~~i~~~~~~--~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~  275 (279)
T 2w5a_A          205 LLYELCALMPPFTAFSQKELAGKIREGKFR--RIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLILEHH  275 (279)
T ss_dssp             HHHHHHHSSCSSCCSSHHHHHHHHHHTCCC--CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCGGG
T ss_pred             HHHHHHHCCCCCcccCHHHHHHHHhhcccc--cCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhhhc
Confidence            368999999999998887777777766432  23456899999999999999999999999999999998643

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.26  E-value=3.8e-12  Score=74.77  Aligned_cols=70  Identities=16%  Similarity=0.344  Sum_probs=55.4

Q ss_pred             CEEeeecCCCCCCCC---CHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCC-HHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNE---PPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRAT-AAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~---~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~-~~~l~~~~~~~~~~   73 (90)
                      ++|+|++|..||...   ........+...   ....+..++.++.++|.+||..||.+|++ +.+++.|+||.+..
T Consensus       206 il~elltG~~Pf~~~~~~~~~~~~~~~~~~---~~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~hp~f~~~~  279 (384)
T 4fr4_A          206 TAYELLRGRRPYHIRSSTSSKEIVHTFETT---VVTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNFPYMNDIN  279 (384)
T ss_dssp             HHHHHHHSSCSSCCCTTSCHHHHHHHHHHC---CCCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHTSGGGTTCC
T ss_pred             HHHHHHhCCCCCCCCCCccHHHHHHHHhhc---ccCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHcChhhhcCC
Confidence            468999999999753   344444444444   33445678999999999999999999998 89999999998765

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.26  E-value=2.3e-12  Score=75.79  Aligned_cols=35  Identities=26%  Similarity=0.552  Sum_probs=32.5

Q ss_pred             CHHHHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832         39 SPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus        39 ~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      ++.+.+||.+||..||.+|+++.++++||||....
T Consensus       307 ~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp~f~~~~  341 (405)
T 3rgf_A          307 DSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLEDP  341 (405)
T ss_dssp             TSHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTSSS
T ss_pred             CHHHHHHHHHHccCCcccCCCHHHHhcChhhccCC
Confidence            67889999999999999999999999999998754

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.26  E-value=7.9e-13  Score=75.11  Aligned_cols=75  Identities=29%  Similarity=0.451  Sum_probs=56.1

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCC------------------------C---CCCCCCCCHHHHHHHHHhhccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPP------------------------K---LKNTHKVSPRLQGFLERLLVRD   53 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~------------------------~---~~~~~~~~~~~~~~i~~~l~~~   53 (90)
                      ++|+|++|..||.+.........+....+.                        .   ......++.++.+++.+||..|
T Consensus       214 il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  293 (320)
T 2i6l_A          214 IFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFS  293 (320)
T ss_dssp             HHHHHHHSSCSSCCSSHHHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSS
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCC
Confidence            368999999999998776655544322110                        0   0112357899999999999999


Q ss_pred             CCCCCCHHHHhcCccccccCCC
Q psy10832         54 PLQRATAAELLQHPFLRQAGPP   75 (90)
Q Consensus        54 p~~R~~~~~l~~~~~~~~~~~~   75 (90)
                      |.+|+++.++++||||+....+
T Consensus       294 P~~Rpt~~ell~hp~~~~~~~p  315 (320)
T 2i6l_A          294 PMDRLTAEEALSHPYMSIYSFP  315 (320)
T ss_dssp             GGGSCCHHHHHTSHHHHTTCC-
T ss_pred             ccccCCHHHHhCCcccccccCc
Confidence            9999999999999999976544

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.25  E-value=5.4e-12  Score=72.88  Aligned_cols=63  Identities=17%  Similarity=0.361  Sum_probs=53.5

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      ++|||++ |+.||.+.+.......+..+..  ...|..+++++.+++.+||..||.+||++.+++.
T Consensus       249 vl~Ellt~G~~Pf~~~~~~~~~~~i~~g~~--~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~  312 (329)
T 4aoj_A          249 VLWEIFTYGKQPWYQLSNTEAIDCITQGRE--LERPRACPPEVYAIMRGCWQREPQQRHSIKDVHA  312 (329)
T ss_dssp             HHHHHHTTSCCTTCSSCHHHHHHHHHHTCC--CCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHH
T ss_pred             HHHHHHcCCCCCCCCCCHHHHHHHHHcCCC--CCCcccccHHHHHHHHHHcCcChhHCcCHHHHHH
Confidence            4789998 8999999988888888877643  3345678999999999999999999999998864

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.25  E-value=2.8e-12  Score=78.64  Aligned_cols=70  Identities=24%  Similarity=0.552  Sum_probs=55.1

Q ss_pred             CEEeeecCCCCCCCCC----HHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCC-----CHHHHhcCccccc
Q psy10832          1 MVVEMVDGEPPFFNEP----PLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRA-----TAAELLQHPFLRQ   71 (90)
Q Consensus         1 il~~~~~g~~p~~~~~----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~-----~~~~l~~~~~~~~   71 (90)
                      ++|+|++|.+||.+..    .......+...   ....+..++++++++|.+||..||.+|+     ++.++++||||.+
T Consensus       374 ilyeLltG~~PF~~~~~~~~~~~i~~~i~~~---~~~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~HpfF~~  450 (576)
T 2acx_A          374 LLYEMIAGQSPFQQRKKKIKREEVERLVKEV---PEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKK  450 (576)
T ss_dssp             HHHHHHHSSCSSSCSSSCCCHHHHHHHHHHC---CCCCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTSGGGTT
T ss_pred             HHHHHHhCCCCCcccccchhHHHHHHHhhcc---cccCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhChhhcc
Confidence            4689999999998753    34444444444   2333567899999999999999999999     6899999999997


Q ss_pred             cC
Q psy10832         72 AG   73 (90)
Q Consensus        72 ~~   73 (90)
                      ..
T Consensus       451 i~  452 (576)
T 2acx_A          451 LN  452 (576)
T ss_dssp             CC
T ss_pred             CC
Confidence            54

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.24  E-value=6.4e-12  Score=72.74  Aligned_cols=41  Identities=24%  Similarity=0.545  Sum_probs=36.2

Q ss_pred             CCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCCCc
Q psy10832         36 HKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPPA   76 (90)
Q Consensus        36 ~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~~~   76 (90)
                      ..++.++.+|+.+||..||.+|+++.++++||||+......
T Consensus       295 ~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~~~  335 (360)
T 3eqc_A          295 GVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDAEE  335 (360)
T ss_dssp             TTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHHHHHSC
T ss_pred             ccccHHHHHHHHHHhhcChhhCCCHHHHhhChHhhcchHhh
Confidence            34789999999999999999999999999999999765433

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.24  E-value=9.4e-13  Score=73.87  Aligned_cols=73  Identities=25%  Similarity=0.450  Sum_probs=58.4

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCC-CCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPP-KLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      ++|+|++|..||.+.........+...... ....+...++.+.+++.+||..||.+||++.+++.|+||+...
T Consensus       200 il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~  273 (283)
T 3bhy_A          200 ITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIR  273 (283)
T ss_dssp             HHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHH
T ss_pred             HHHHHHHCCCCCCCcchHHHHHHhHhcccCCcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHH
Confidence            367899999999998887777776654321 1112246789999999999999999999999999999998754

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.24  E-value=2.9e-12  Score=73.89  Aligned_cols=74  Identities=30%  Similarity=0.400  Sum_probs=54.5

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhc--CCCC---------------------CC------CCCCCCCHHHHHHHHHhhc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRD--MPPP---------------------KL------KNTHKVSPRLQGFLERLLV   51 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~--~~~~---------------------~~------~~~~~~~~~~~~~i~~~l~   51 (90)
                      ++|+|++|.+||.+.+.......+..  +.+.                     ..      ..+..+++++.+++.+||.
T Consensus       212 il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  291 (353)
T 2b9h_A          212 ILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLV  291 (353)
T ss_dssp             HHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSC
T ss_pred             HHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcC
Confidence            36889999999998876655443321  1000                     00      0113578999999999999


Q ss_pred             cCCCCCCCHHHHhcCccccccCC
Q psy10832         52 RDPLQRATAAELLQHPFLRQAGP   74 (90)
Q Consensus        52 ~~p~~R~~~~~l~~~~~~~~~~~   74 (90)
                      .||.+|+++.++++||||+....
T Consensus       292 ~dP~~Rpt~~ell~hp~~~~~~~  314 (353)
T 2b9h_A          292 FDPAKRITAKEALEHPYLQTYHD  314 (353)
T ss_dssp             SSGGGSCCHHHHHTSGGGTTTCC
T ss_pred             cCcccCCCHHHHhcCccccccCC
Confidence            99999999999999999997653

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.23  E-value=1.9e-12  Score=73.39  Aligned_cols=73  Identities=23%  Similarity=0.432  Sum_probs=49.3

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCC-CCCCCCC----CCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMP-PPKLKNT----HKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~-~~~~~~~----~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      ++|+|++|..||.+.........+.... ......+    ..+++++.+++.+||..||.+||++.++++||||....
T Consensus       187 il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp~~~~~~  264 (299)
T 3m2w_A          187 IMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST  264 (299)
T ss_dssp             HHHHHHHSSCSCCC-------CCSCCSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTGG
T ss_pred             HHHHHHHCCCCCCCCcchhhhHHHHHHHhhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcChhhcccc
Confidence            3689999999998765543322111110 0111111    45789999999999999999999999999999998654

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.23  E-value=6.3e-13  Score=75.97  Aligned_cols=82  Identities=24%  Similarity=0.330  Sum_probs=56.7

Q ss_pred             CEEeeecCCCCCCCCCHH-HHHHHhhcCCCCC-CCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCCCccc
Q psy10832          1 MVVEMVDGEPPFFNEPPL-QAMRRIRDMPPPK-LKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPPALL   78 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~-~~~~~i~~~~~~~-~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~~~~~   78 (90)
                      ++|+|++|..||.+.... .....+..+.... ...+..++.++.+++.+||..||.+|+++.++++|+||.........
T Consensus       208 il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h~~~~~~~~~~~~  287 (322)
T 2ycf_A          208 ILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKF  287 (322)
T ss_dssp             HHHHHHHSSCSSCSTTCSSCHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGCCHHHHHHH
T ss_pred             HHHHHHhCCCCCcccchHHHHHHHHHhCccccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhCcCcCCHHHHHHH
Confidence            368999999999864322 2223333332211 11224678999999999999999999999999999999876544444


Q ss_pred             HHHH
Q psy10832         79 VPLM   82 (90)
Q Consensus        79 ~~~~   82 (90)
                      ...+
T Consensus       288 ~~~~  291 (322)
T 2ycf_A          288 QDLL  291 (322)
T ss_dssp             HHHH
T ss_pred             HHHh
Confidence            4433

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.23  E-value=4e-12  Score=77.52  Aligned_cols=70  Identities=27%  Similarity=0.447  Sum_probs=55.8

Q ss_pred             CEEeeecCCCCCCCC----CHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCC-----HHHHhcCccccc
Q psy10832          1 MVVEMVDGEPPFFNE----PPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRAT-----AAELLQHPFLRQ   71 (90)
Q Consensus         1 il~~~~~g~~p~~~~----~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~-----~~~l~~~~~~~~   71 (90)
                      ++|+|++|.+||.+.    ........+...   ....+..++.++.++|.+||..||.+|++     +.+++.||||.+
T Consensus       378 ilyelltG~~PF~~~~~~~~~~~~~~~i~~~---~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~Hpff~~  454 (543)
T 3c4z_A          378 TLYEMIAARGPFRARGEKVENKELKQRVLEQ---AVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRD  454 (543)
T ss_dssp             HHHHHHHSSCSSCCTTCCCCHHHHHHHHHHC---CCCCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTSGGGTT
T ss_pred             HHHHHHhCCCCCCCCccchhHHHHHHHHhhc---ccCCCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcCccccC
Confidence            468999999999875    344555555555   33345678999999999999999999996     489999999997


Q ss_pred             cC
Q psy10832         72 AG   73 (90)
Q Consensus        72 ~~   73 (90)
                      ..
T Consensus       455 i~  456 (543)
T 3c4z_A          455 IS  456 (543)
T ss_dssp             CC
T ss_pred             CC
Confidence            54

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.23  E-value=3.8e-12  Score=73.69  Aligned_cols=77  Identities=17%  Similarity=0.352  Sum_probs=56.6

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCC-CC----------------------CC------CCCCCCCHHHHHHHHHhhc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMP-PP----------------------KL------KNTHKVSPRLQGFLERLLV   51 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~-~~----------------------~~------~~~~~~~~~~~~~i~~~l~   51 (90)
                      ++|+|++|..||.+.+.......+.... .+                      ..      ......++.+.+++.+||.
T Consensus       223 il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  302 (362)
T 3pg1_A          223 VMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLE  302 (362)
T ss_dssp             HHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTC
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhc
Confidence            3689999999999987666555443200 00                      00      0123568899999999999


Q ss_pred             cCCCCCCCHHHHhcCccccccCCCcc
Q psy10832         52 RDPLQRATAAELLQHPFLRQAGPPAL   77 (90)
Q Consensus        52 ~~p~~R~~~~~l~~~~~~~~~~~~~~   77 (90)
                      .||.+|+++.++++||||........
T Consensus       303 ~dP~~Rpt~~ell~hp~f~~~~~~~~  328 (362)
T 3pg1_A          303 FNPQRRISTEQALRHPYFESLFDPLD  328 (362)
T ss_dssp             SSGGGSCCHHHHHTSGGGTTTCCGGG
T ss_pred             CChhhCCCHHHHHcCchhhhccCccc
Confidence            99999999999999999998764443

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.22  E-value=3.6e-12  Score=72.89  Aligned_cols=71  Identities=24%  Similarity=0.354  Sum_probs=53.9

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCCCcccHH
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPPALLVP   80 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~~~~~~~   80 (90)
                      ++|+|++|..||.....      +...   ....+..+++++.+++.+||..||.+||++.++++|+||...........
T Consensus       238 il~el~~g~~pf~~~~~------~~~~---~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~~~~~~~~  308 (320)
T 3a99_A          238 LLYDMVCGDIPFEHDEE------IIRG---QVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE  308 (320)
T ss_dssp             HHHHHHHSSCSCCSHHH------HHHC---CCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSCCCHHHHHH
T ss_pred             HHHHHHHCCCCCCChhh------hhcc---cccccccCCHHHHHHHHHHccCChhhCcCHHHHhcCHhhcCccCcccccc
Confidence            36889999999976421      2222   12234567999999999999999999999999999999998765444333

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.22  E-value=9.6e-12  Score=71.02  Aligned_cols=66  Identities=12%  Similarity=0.240  Sum_probs=54.9

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCcccc
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLR   70 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~   70 (90)
                      ++|||++ |+.||.+.+.......+..+..+  ..|..+++++.+++..||..||.+||++.++.  .|+.
T Consensus       219 vl~Ellt~G~~Pf~~~~~~~~~~~i~~~~~~--~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~--~~L~  285 (299)
T 4asz_A          219 VLWEIFTYGKQPWYQLSNNEVIECITQGRVL--QRPRTCPQEVYELMLGCWQREPHMRKNIKGIH--TLLQ  285 (299)
T ss_dssp             HHHHHHTTTCCTTTTSCHHHHHHHHHHTCCC--CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH--HHHH
T ss_pred             HHHHHHcCCCCCCCCCCHHHHHHHHHcCCCC--CCCccchHHHHHHHHHHcCCChhHCcCHHHHH--HHHH
Confidence            4789998 99999999988888888877533  34567899999999999999999999999883  4544

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.22  E-value=2.4e-12  Score=75.80  Aligned_cols=73  Identities=27%  Similarity=0.423  Sum_probs=53.2

Q ss_pred             CEEeeecCCCCCCCCCHHH----HHHHhhcCCC-CCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQ----AMRRIRDMPP-PKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~----~~~~i~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      ++|+|++|..||.+.....    ....+..+.. .....+..++.++.+||.+||..||.+|+++.+++.|+||....
T Consensus       252 il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~~  329 (400)
T 1nxk_A          252 IMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST  329 (400)
T ss_dssp             HHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHTTT
T ss_pred             HHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccCCC
Confidence            4689999999998653221    2233333322 11122356899999999999999999999999999999998644

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.22  E-value=6.2e-13  Score=77.56  Aligned_cols=65  Identities=14%  Similarity=0.187  Sum_probs=47.7

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCcccccc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQA   72 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~   72 (90)
                      ++|+|++|..||.+.........+..       .+..+++++.+++.+||..||.+||++.++++|+||...
T Consensus       302 il~elltg~~Pf~~~~~~~~~~~~~~-------~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~  366 (377)
T 3byv_A          302 VIYWIWCADLPITKDAALGGSEWIFR-------SCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQL  366 (377)
T ss_dssp             HHHHHHHSSCCC------CCSGGGGS-------SCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTSHHHHHH
T ss_pred             HHHHHHHCCCCCcccccccchhhhhh-------hccCCCHHHHHHHHHHcCCCchhCCCHHHHhhChHHHHH
Confidence            36899999999987654332222221       234679999999999999999999999999999999864

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.22  E-value=2e-12  Score=74.81  Aligned_cols=32  Identities=41%  Similarity=0.587  Sum_probs=29.8

Q ss_pred             CHHHHHHHHHhhccCCCCCCCHHHHhcCcccc
Q psy10832         39 SPRLQGFLERLLVRDPLQRATAAELLQHPFLR   70 (90)
Q Consensus        39 ~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~   70 (90)
                      ++.+.+|+.+||..||.+||++.++++||||+
T Consensus       329 ~~~l~~li~~~L~~dP~~Rpta~elL~hp~f~  360 (360)
T 3llt_A          329 HELFCDFLYSILQIDPTLRPSPAELLKHKFLE  360 (360)
T ss_dssp             CHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGC
T ss_pred             HHHHHHHHHHHhcCChhhCCCHHHHhcCcccC
Confidence            36788999999999999999999999999985

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.21  E-value=9.7e-12  Score=71.25  Aligned_cols=64  Identities=13%  Similarity=0.189  Sum_probs=53.9

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcC
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQH   66 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~   66 (90)
                      ++|||++ |..||.+.+.......+..+..  .+.|..+++++.+++..||..||.+||++.+|.++
T Consensus       236 vl~El~t~g~~Pf~~~~~~~~~~~i~~~~~--~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~  300 (308)
T 4gt4_A          236 VLWEVFSYGLQPYCGYSNQDVVEMIRNRQV--LPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSR  300 (308)
T ss_dssp             HHHHHHTTTCCTTTTCCHHHHHHHHHTTCC--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHhCCCCCCCCCCHHHHHHHHHcCCC--CCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            4789998 8999999998888888877653  33456789999999999999999999999998653

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.21  E-value=2e-12  Score=73.86  Aligned_cols=35  Identities=34%  Similarity=0.584  Sum_probs=31.9

Q ss_pred             CHHHHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832         39 SPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus        39 ~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      ++++.+++.+||..||.+||++.++++||||+...
T Consensus       302 ~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~  336 (339)
T 1z57_A          302 HERLFDLIQKMLEYDPAKRITLREALKHPFFDLLK  336 (339)
T ss_dssp             HHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGGG
T ss_pred             HHHHHHHHHHHhCcCcccccCHHHHhcCHHHHHHh
Confidence            46788999999999999999999999999998654

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.21  E-value=2.1e-12  Score=74.25  Aligned_cols=35  Identities=40%  Similarity=0.548  Sum_probs=32.0

Q ss_pred             CHHHHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832         39 SPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus        39 ~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      +.++.+++.+||..||.+||++.++++|+||....
T Consensus       307 ~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~  341 (355)
T 2eu9_A          307 HVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGLT  341 (355)
T ss_dssp             HHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGCC
T ss_pred             HHHHHHHHHHHhcCChhhCcCHHHHhcChhhcCCC
Confidence            35788999999999999999999999999999764

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.20  E-value=2.2e-12  Score=75.17  Aligned_cols=73  Identities=22%  Similarity=0.339  Sum_probs=53.4

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCC-C--------------------CCC------------CCC------CCCHH
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPP-P--------------------KLK------------NTH------KVSPR   41 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~-~--------------------~~~------------~~~------~~~~~   41 (90)
                      ++|+|++|..||.+.+.......+..... +                    ...            .+.      ..+.+
T Consensus       215 il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (371)
T 2xrw_A          215 IMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQ  294 (371)
T ss_dssp             HHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHH
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHH
Confidence            36899999999999887776666544211 0                    000            000      01467


Q ss_pred             HHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832         42 LQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus        42 ~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      +++||.+||..||.+|+++.++++||||....
T Consensus       295 ~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~~  326 (371)
T 2xrw_A          295 ARDLLSKMLVIDASKRISVDEALQHPYINVWY  326 (371)
T ss_dssp             HHHHHHHHSCSSGGGSCCHHHHHHSHHHHTTC
T ss_pred             HHHHHHHHCcCChhhCCCHHHHhCCcchhhhc
Confidence            89999999999999999999999999998654

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.19  E-value=6.2e-12  Score=71.90  Aligned_cols=37  Identities=38%  Similarity=0.573  Sum_probs=34.2

Q ss_pred             CCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCC
Q psy10832         38 VSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGP   74 (90)
Q Consensus        38 ~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~   74 (90)
                      +++++.+||.+||..||.+|+++.++++||||++...
T Consensus       292 ~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~~~  328 (330)
T 3nsz_A          292 VSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVK  328 (330)
T ss_dssp             CCHHHHHHHHTTSCSSGGGSCCHHHHHTSGGGTTCC-
T ss_pred             CCHHHHHHHHHHhcCCcccCCCHHHHhcCccHhhhcc
Confidence            6899999999999999999999999999999997653

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.19  E-value=2.1e-11  Score=70.68  Aligned_cols=70  Identities=26%  Similarity=0.496  Sum_probs=54.3

Q ss_pred             CEEeeecCCCCCCCC----CHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCC-----CHHHHhcCccccc
Q psy10832          1 MVVEMVDGEPPFFNE----PPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRA-----TAAELLQHPFLRQ   71 (90)
Q Consensus         1 il~~~~~g~~p~~~~----~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~-----~~~~l~~~~~~~~   71 (90)
                      ++|+|++|..||...    ........+...   ....+..++..+.++|.+||..||.+|+     ++.++++|+||..
T Consensus       251 il~ell~g~~pf~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~~  327 (355)
T 1vzo_A          251 LMYELLTGASPFTVDGEKNSQAEISRRILKS---EPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQK  327 (355)
T ss_dssp             HHHHHHHSSCTTSCTTSCCCHHHHHHHHHHC---CCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTT
T ss_pred             HHHHHHHCCCCCccCCccchHHHHHHHHhcc---CCCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchhc
Confidence            368999999999753    334444444444   2333557899999999999999999999     8999999999986


Q ss_pred             cC
Q psy10832         72 AG   73 (90)
Q Consensus        72 ~~   73 (90)
                      ..
T Consensus       328 ~~  329 (355)
T 1vzo_A          328 IN  329 (355)
T ss_dssp             CC
T ss_pred             CC
Confidence            54

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.18  E-value=4.8e-12  Score=75.22  Aligned_cols=72  Identities=21%  Similarity=0.326  Sum_probs=50.2

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCcccccc
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQA   72 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~   72 (90)
                      ++|+|++ |..||...........+..............+..+.++|.+||..||.+||++.++++||||...
T Consensus       218 il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~hp~f~~~  290 (432)
T 3p23_A          218 VFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFWSL  290 (432)
T ss_dssp             HHHHHHTTSCBTTBSTTTHHHHHHTTCCCCTTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTSTTTCCH
T ss_pred             HHHHHHcCCCCCcchhhHHHHHHHhccCCccccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHhCccccCh
Confidence            3678998 99999776544433332222211222222345668999999999999999999999999999753

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.18  E-value=4.2e-12  Score=73.14  Aligned_cols=73  Identities=26%  Similarity=0.390  Sum_probs=46.8

Q ss_pred             CEEeeecCCCCCCCCCHHHHH----HHhhcCCC-CCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAM----RRIRDMPP-PKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~----~~i~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      ++|+|++|..||.+.......    ..+..... .....+..++.++.+++..||..||.+||++.++++||||....
T Consensus       218 il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~  295 (336)
T 3fhr_A          218 IMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSM  295 (336)
T ss_dssp             HHHHHHHSSCCC---------------------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTGG
T ss_pred             HHHHHHHCCCCCCCccchhhhhhHHHhhhccccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccccc
Confidence            368899999999876543321    11111111 11222346799999999999999999999999999999998643

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.17  E-value=1.5e-12  Score=75.82  Aligned_cols=73  Identities=15%  Similarity=0.069  Sum_probs=51.6

Q ss_pred             CEEeeecCCCCCCCCCHHHH--HHH---hhc-CCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQA--MRR---IRD-MPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~--~~~---i~~-~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      ++|+|++|..||.+......  ...   ... ........+..+++.+.+++.+||..||.+|+++.++++||||....
T Consensus       282 il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~  360 (371)
T 3q60_A          282 SIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQLQ  360 (371)
T ss_dssp             HHHHHHHSSCSTTBCCTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHHHHHHH
T ss_pred             HHHHHHhCCCCCCCcCcccccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHHHHHHH
Confidence            36899999999987633210  000   000 11112222347799999999999999999999999999999998643

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.16  E-value=2.8e-12  Score=74.32  Aligned_cols=37  Identities=32%  Similarity=0.561  Sum_probs=33.1

Q ss_pred             CCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCC
Q psy10832         38 VSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGP   74 (90)
Q Consensus        38 ~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~   74 (90)
                      .+.++.+||.+||..||.+||++.++++||||+....
T Consensus       306 ~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~  342 (373)
T 1q8y_A          306 EAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLG  342 (373)
T ss_dssp             HHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTCTT
T ss_pred             hHHHHHHHHHHHhccCccccCCHHHHhhChhhhcccC
Confidence            3567889999999999999999999999999997643

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.16  E-value=3.7e-11  Score=67.27  Aligned_cols=67  Identities=27%  Similarity=0.344  Sum_probs=48.2

Q ss_pred             EEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832          2 VVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus         2 l~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      +|+|++|.+++.....   ...+.....+  ..+..+++++.+++.+||..||.+||++.++++|+||.+..
T Consensus       221 l~~l~~~~~~~~~~~~---~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~  287 (289)
T 1x8b_A          221 VVCAAGAEPLPRNGDQ---WHEIRQGRLP--RIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLSAS  287 (289)
T ss_dssp             HHHHTTCCCCCSSSHH---HHHHHTTCCC--CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTCTTC----
T ss_pred             HHHHhcCCCCCcchhH---HHHHHcCCCC--CCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhChHhhhhc
Confidence            5788888877655432   2333344322  23457899999999999999999999999999999998654

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.15  E-value=2.3e-11  Score=69.72  Aligned_cols=65  Identities=12%  Similarity=0.186  Sum_probs=47.5

Q ss_pred             CEEeeecCCCCCCCCCHHHHHH-HhhcCCC-CC-CCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMR-RIRDMPP-PK-LKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~-~i~~~~~-~~-~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      ++|||++|..||.+.+....+. .+..+.. +. ...+..+++++.+++.+||..||.+||++.++++
T Consensus       226 vl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~  293 (307)
T 3omv_A          226 VLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILS  293 (307)
T ss_dssp             HHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHH
T ss_pred             HHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCCcccccccchHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence            4789999999999865544433 3333321 22 2334568999999999999999999999887653

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.14  E-value=2e-11  Score=70.39  Aligned_cols=63  Identities=24%  Similarity=0.332  Sum_probs=49.1

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCcccccc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQA   72 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~   72 (90)
                      ++|+|++|..||.....      ....   ....+..+++++.+++.+||..||.+||++.++++|+||...
T Consensus       219 il~el~~g~~pf~~~~~------~~~~---~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~hp~~~~~  281 (335)
T 3dls_A          219 TLYTLVFEENPFCELEE------TVEA---AIHPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQP  281 (335)
T ss_dssp             HHHHHHHSSCSCSSGGG------GTTT---CCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHCTTTTCC
T ss_pred             HHHHHHhCCCchhhHHH------HHhh---ccCCCcccCHHHHHHHHHHccCChhhCcCHHHHhcCccccCC
Confidence            36889999999976321      1111   223345679999999999999999999999999999999864

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.12  E-value=3.1e-11  Score=68.63  Aligned_cols=66  Identities=26%  Similarity=0.474  Sum_probs=49.6

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCCC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPP   75 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~~   75 (90)
                      ++|+|++|..||.....      +...   ....+..++.++.+++.+||..||.+|+++.+++.|+||......
T Consensus       228 il~~l~~g~~pf~~~~~------~~~~---~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~~~~~~~~~~  293 (312)
T 2iwi_A          228 LLYDMVCGDIPFERDQE------ILEA---ELHFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQTPAED  293 (312)
T ss_dssp             HHHHHHHSSCSCCSHHH------HHHT---CCCCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHSTTTCC----
T ss_pred             HHHHHHHCCCCCCChHH------Hhhh---ccCCcccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhcCchhc
Confidence            36889999999976421      2222   223345689999999999999999999999999999999976543

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.12  E-value=1.4e-11  Score=71.79  Aligned_cols=64  Identities=20%  Similarity=0.388  Sum_probs=49.9

Q ss_pred             CEEeeec-CCCCCCCCC-HHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcC
Q psy10832          1 MVVEMVD-GEPPFFNEP-PLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQH   66 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~   66 (90)
                      ++|||++ |..||.+.+ .......+..+.  ....|...++++.+++..||..||.+||++.++++|
T Consensus       276 ~l~El~t~G~~Pf~~~~~~~~~~~~i~~g~--~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~  341 (353)
T 4ase_A          276 LLWEIFSLGASPYPGVKIDEEFCRRLKEGT--RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  341 (353)
T ss_dssp             HHHHHTTTSCCSSTTCCCSHHHHHHHHHTC--CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHhCCCCCCCCCCHHHHHHHHHHcCC--CCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence            4789997 999999865 334444455553  233456789999999999999999999999999876

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.11  E-value=8.5e-12  Score=71.37  Aligned_cols=73  Identities=25%  Similarity=0.464  Sum_probs=51.0

Q ss_pred             CEEeeecCCCCCCCCCHH-HHHHHhhcCCCCCCC--CCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPL-QAMRRIRDMPPPKLK--NTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~-~~~~~i~~~~~~~~~--~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      ++|+|++|..||.+.... .....+..+..+...  ....+++.+.+++..||..||.+||++.++++|+||....
T Consensus       218 il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~~  293 (327)
T 3aln_A          218 TLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILMYE  293 (327)
T ss_dssp             HHHHHHHSCCCSSCC-------CCCCCSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHHH
T ss_pred             HHHHHHHCCCCCCCcchHHHHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhChHHHHhH
Confidence            368899999999875332 222222233222221  1235789999999999999999999999999999998654

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.11  E-value=6.7e-12  Score=73.15  Aligned_cols=33  Identities=42%  Similarity=0.593  Sum_probs=30.3

Q ss_pred             CHHHHHHHHHhhccCCCCCCCHHHHhcCccccc
Q psy10832         39 SPRLQGFLERLLVRDPLQRATAAELLQHPFLRQ   71 (90)
Q Consensus        39 ~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~   71 (90)
                      +..+.+||.+||..||.+|+++.++++||||++
T Consensus       365 ~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~  397 (397)
T 1wak_A          365 AAGFTDFLLPMLELIPEKRATAAECLRHPWLNS  397 (397)
T ss_dssp             HHHHHHHHGGGGCSSGGGSCCHHHHHTSGGGGC
T ss_pred             HHHHHHHHHHHhccChhhcCCHHHHhhCccccC
Confidence            356889999999999999999999999999974

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.09  E-value=1.3e-10  Score=69.36  Aligned_cols=39  Identities=33%  Similarity=0.489  Sum_probs=35.5

Q ss_pred             CCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCC
Q psy10832         36 HKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGP   74 (90)
Q Consensus        36 ~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~   74 (90)
                      ...++++.+||.+||..||.+|+++.++++||||.....
T Consensus       367 ~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~~~~~  405 (458)
T 3rp9_A          367 PASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEVRI  405 (458)
T ss_dssp             TTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTCC
T ss_pred             CCCCHHHHHHHHHHhccCccccCCHHHHhcCHhhhhcCC
Confidence            356899999999999999999999999999999998653

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.07  E-value=1.6e-10  Score=68.58  Aligned_cols=41  Identities=27%  Similarity=0.420  Sum_probs=36.8

Q ss_pred             CCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCCCc
Q psy10832         36 HKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPPA   76 (90)
Q Consensus        36 ~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~~~   76 (90)
                      ..+++++.+||.+||..||.+|+++.++++||||....+..
T Consensus       332 ~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~~~  372 (432)
T 3n9x_A          332 PSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDVRKKK  372 (432)
T ss_dssp             TTSCHHHHHHHHHHSCSSTTTSCCHHHHHTCGGGTTTCCTT
T ss_pred             CCCCHHHHHHHHHHhcCCcccCCCHHHHhcChhhhhccCcc
Confidence            35799999999999999999999999999999999876443

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.06  E-value=8e-12  Score=73.80  Aligned_cols=65  Identities=14%  Similarity=0.176  Sum_probs=51.0

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCcccccc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQA   72 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~   72 (90)
                      ++|+|++|..||.+.+.......+.       .....+++++.+++.+||..||.+|+++.+++.|+||...
T Consensus       306 il~elltg~~Pf~~~~~~~~~~~~~-------~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~~~~~~~  370 (413)
T 3dzo_A          306 AIYWIWCADLPNTDDAALGGSEWIF-------RSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQL  370 (413)
T ss_dssp             HHHHHHHSSCCCCTTGGGSCSGGGG-------SSCCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred             HHHHHHHCCCCCCCcchhhhHHHHH-------hhcccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHHHH
Confidence            3689999999998765433222221       2234678999999999999999999999999999999864

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.05  E-value=3.3e-11  Score=68.69  Aligned_cols=66  Identities=29%  Similarity=0.276  Sum_probs=47.9

Q ss_pred             EEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccc
Q psy10832          2 VVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQ   71 (90)
Q Consensus         2 l~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~   71 (90)
                      +|+|++|..|+.+...   ...+..... ....+..+++++.+++..||..||.+||++.++++||||+.
T Consensus       245 l~el~~g~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~~~~  310 (311)
T 3p1a_A          245 ILEVACNMELPHGGEG---WQQLRQGYL-PPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLALPVLRQ  310 (311)
T ss_dssp             HHHHHHTCCCCSSHHH---HHHHTTTCC-CHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGSC
T ss_pred             HHHHHhCCCCCCCccH---HHHHhccCC-CcccccCCCHHHHHHHHHHcCCChhhCcCHHHHHhCccccC
Confidence            6788898766654322   222332221 12223567999999999999999999999999999999974

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.05  E-value=9.7e-11  Score=66.85  Aligned_cols=71  Identities=15%  Similarity=0.225  Sum_probs=51.5

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCC-------HHHHhcCcccccc
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRAT-------AAELLQHPFLRQA   72 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~-------~~~l~~~~~~~~~   72 (90)
                      ++|+|++ |..||.+.........+.....  ...+..+++++.+++..||..||.+||+       +++++.|+|+...
T Consensus       228 il~ell~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~~~  305 (323)
T 3qup_A          228 TMWEIMTRGQTPYAGIENAEIYNYLIGGNR--LKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLST  305 (323)
T ss_dssp             HHHHHHTTSCCTTTTCCGGGHHHHHHTTCC--CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC------
T ss_pred             HHHHHHhCCCCCccccChHHHHHHHhcCCC--CCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhcCC
Confidence            3678898 9999998877777666665542  3334578999999999999999999999       6678899999875


Q ss_pred             C
Q psy10832         73 G   73 (90)
Q Consensus        73 ~   73 (90)
                      .
T Consensus       306 ~  306 (323)
T 3qup_A          306 S  306 (323)
T ss_dssp             -
T ss_pred             C
Confidence            4

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.03  E-value=3.3e-11  Score=71.60  Aligned_cols=69  Identities=20%  Similarity=0.371  Sum_probs=48.1

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCC--CCCCC--CCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccc
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPP--PKLKN--THKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQ   71 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~--~~~~~--~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~   71 (90)
                      ++|+|++ |..||.+.....  ..+.....  +....  ...+++++.+++..||..||.+||++.++++||||..
T Consensus       228 il~ellt~g~~Pf~~~~~~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~hp~f~~  301 (434)
T 2rio_A          228 VFYYILSKGKHPFGDKYSRE--SNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWP  301 (434)
T ss_dssp             HHHHHHTTSCCTTCSTTTHH--HHHHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSC
T ss_pred             HHHHHHhCCCCCCCCchhhH--HHHhcCCCCcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhCCccCC
Confidence            3678998 999998754332  12222211  11111  1123578999999999999999999999999999964

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=98.99  E-value=2.4e-11  Score=69.37  Aligned_cols=70  Identities=16%  Similarity=0.368  Sum_probs=46.8

Q ss_pred             CEEeeecCCCCCCCCCH-HHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCCC
Q psy10832          1 MVVEMVDGEPPFFNEPP-LQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPP   75 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~~   75 (90)
                      ++|||++   ||.+... ......+.....+  +.+...++...+||.+||..||.+||++.++++|+||++...+
T Consensus       219 ilyell~---Pf~~~~~~~~~~~~~~~~~~p--~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~~~p  289 (299)
T 4g31_A          219 ILFELLY---PFSTQMERVRTLTDVRNLKFP--PLFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFEDLDFP  289 (299)
T ss_dssp             HHHHHHS---CCSSHHHHHHHHHHHHTTCCC--HHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGCCC---
T ss_pred             HHHHHcc---CCCCccHHHHHHHHHhcCCCC--CCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCCCCCC
Confidence            3678885   7765432 2333344443221  1122346778999999999999999999999999999976543

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=98.97  E-value=1.4e-10  Score=65.31  Aligned_cols=72  Identities=18%  Similarity=0.242  Sum_probs=47.8

Q ss_pred             EEeeecCCCCCCCC-CHHHHHHHhhcCCC-CCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCCCc
Q psy10832          2 VVEMVDGEPPFFNE-PPLQAMRRIRDMPP-PKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPPA   76 (90)
Q Consensus         2 l~~~~~g~~p~~~~-~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~~~   76 (90)
                      +|+|++   ||... ........+..... .....+...+..+.+++..||..||.+||++.++++|+||.......
T Consensus       221 l~~l~~---p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~~~~  294 (303)
T 1zy4_A          221 FFEMIY---PFSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVKHQDE  294 (303)
T ss_dssp             HHHHHS---CCSSHHHHHHHHHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSSCSCCCCHHH
T ss_pred             HHHHHh---ccCCchhHHHHHHhccccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCCCCcCCCChHH
Confidence            466776   45432 22333444443321 11222345678899999999999999999999999999998654433

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=98.95  E-value=5.7e-11  Score=67.64  Aligned_cols=72  Identities=22%  Similarity=0.427  Sum_probs=56.5

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCC-CCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCcccccc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPP-PKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQA   72 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~   72 (90)
                      ++|+|++|..||.+.........+..... +.......++.++.+++.+||..||.+|++..+++.|+|+...
T Consensus       208 ~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~  280 (311)
T 3ork_A          208 VLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH  280 (311)
T ss_dssp             HHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred             HHHHHHhCCCCCCCCChHHHHHHHhcCCCCCcccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHh
Confidence            36899999999999887776655554432 2222234689999999999999999999999999999998753

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=98.94  E-value=6.8e-10  Score=61.90  Aligned_cols=65  Identities=18%  Similarity=0.248  Sum_probs=51.6

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQH   66 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~   66 (90)
                      ++|+|++|..||.+.+.......+..... ....+..+++.+.+++.+||..||.+||++.+++++
T Consensus       203 ~l~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~  267 (271)
T 3dtc_A          203 LLWELLTGEVPFRGIDGLAVAYGVAMNKL-ALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQ  267 (271)
T ss_dssp             HHHHHHHCCCTTTTSCHHHHHHHHHTSCC-CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHhhhcCCC-CCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHH
Confidence            36889999999999887776666554432 233456789999999999999999999999998753

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=98.92  E-value=9.7e-10  Score=61.10  Aligned_cols=64  Identities=16%  Similarity=0.253  Sum_probs=50.7

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      ++|+|++|..||.+.+.......+..... ....+..+++++.+++..||..||.+||++.++++
T Consensus       200 il~el~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  263 (271)
T 3kmu_A          200 LLWELVTREVPFADLSNMEIGMKVALEGL-RPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVP  263 (271)
T ss_dssp             HHHHHHHCSCTTTTSCHHHHHHHHHHSCC-CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHhCCCCccccChHHHHHHHHhcCC-CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            36899999999999887776666554332 22335678999999999999999999999998863

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=98.92  E-value=6.6e-10  Score=64.74  Aligned_cols=68  Identities=10%  Similarity=0.155  Sum_probs=56.0

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCcccc
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLR   70 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~   70 (90)
                      ++|+|++ |..||.+.........+..+..  ...+..++..+.+++..||..||.+||++.+++++.++.
T Consensus       275 il~ellt~g~~pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~  343 (367)
T 3l9p_A          275 LLWEIFSLGYMPYPSKSNQEVLEFVTSGGR--MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC  343 (367)
T ss_dssp             HHHHHHTTSCCSSTTCCHHHHHHHHHTTCC--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHhCCCCCCCCCCHHHHHHHHHcCCC--CCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence            3688997 9999999988888877776643  233456799999999999999999999999998877654

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=98.91  E-value=7.2e-10  Score=63.44  Aligned_cols=68  Identities=10%  Similarity=0.130  Sum_probs=55.4

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCcccc
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLR   70 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~   70 (90)
                      ++|+|++ |..||.+.........+.....+  ..+..++..+.+++..||..||.+||++.+++.+.|+.
T Consensus       234 il~ellt~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~  302 (327)
T 2yfx_A          234 LLWEIFSLGYMPYPSKSNQEVLEFVTSGGRM--DPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC  302 (327)
T ss_dssp             HHHHHHTTSCCSSTTCCHHHHHHHHHTTCCC--CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHcCCCCCCCCcCHHHHHHHHhcCCCC--CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence            3678997 99999998887777777665432  23456899999999999999999999999999887754

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=98.90  E-value=1.1e-09  Score=61.12  Aligned_cols=63  Identities=17%  Similarity=0.241  Sum_probs=51.8

Q ss_pred             EEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcC
Q psy10832          2 VVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQH   66 (90)
Q Consensus         2 l~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~   66 (90)
                      +|+|++ |..||.+.........+.....  ...+...++++.+++..||..||.+||++.+++++
T Consensus       197 l~~ll~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~  260 (269)
T 4hcu_A          197 MWEVFSEGKIPYENRSNSEVVEDISTGFR--LYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQ  260 (269)
T ss_dssp             HHHHHTTSCCTTTTCCHHHHHHHHHTTCC--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHhcCCCCCCCCCCHHHHHHHHhcCcc--CCCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence            578888 9999999988888777766532  22345679999999999999999999999998754

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=98.89  E-value=1.4e-09  Score=62.05  Aligned_cols=69  Identities=17%  Similarity=0.379  Sum_probs=53.6

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc--Ccccc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ--HPFLR   70 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~--~~~~~   70 (90)
                      ++|+|++|..||.+.+.......+..... ....+..+++++.+++..||..||.+||++.++++  ..++.
T Consensus       228 il~elltg~~Pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~  298 (309)
T 3p86_A          228 ILWELATLQQPWGNLNPAQVVAAVGFKCK-RLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIK  298 (309)
T ss_dssp             HHHHHHHCCCTTTTSCHHHHHHHHHHSCC-CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHhcCC-CCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence            36899999999999888777666543321 33445678999999999999999999999998875  34444

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=98.89  E-value=7.4e-10  Score=62.34  Aligned_cols=65  Identities=14%  Similarity=0.155  Sum_probs=52.4

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCc
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHP   67 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~   67 (90)
                      ++|+|++ |..||.+.........+..+..  ...+..+++++.+++..||..||.+||++.+++.+.
T Consensus       202 il~ellt~g~~p~~~~~~~~~~~~i~~~~~--~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l  267 (287)
T 1u59_A          202 TMWEALSYGQKPYKKMKGPEVMAFIEQGKR--MECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRM  267 (287)
T ss_dssp             HHHHHHTTSCCTTTTCCTHHHHHHHHTTCC--CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHH
T ss_pred             HHHHHHcCCCCCcccCCHHHHHHHHhcCCc--CCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence            3678998 9999998877777777666543  233457899999999999999999999999987654

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=98.87  E-value=3.6e-09  Score=59.66  Aligned_cols=62  Identities=10%  Similarity=0.093  Sum_probs=50.8

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHh
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELL   64 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~   64 (90)
                      ++|+|++ |..||.+.........+.....  ...+..+++++.+++..||..||.+||++.+++
T Consensus       209 il~~l~~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~  271 (291)
T 1xbb_A          209 LMWEAFSYGQKPYRGMKGSEVTAMLEKGER--MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVE  271 (291)
T ss_dssp             HHHHHHTTTCCSSTTCCHHHHHHHHHTTCC--CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred             HHHHHHhcCCCCCCCCCHHHHHHHHHcCCC--CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHH
Confidence            3678998 9999999888777777666543  233457899999999999999999999998876

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=98.87  E-value=1.5e-09  Score=60.42  Aligned_cols=64  Identities=17%  Similarity=0.192  Sum_probs=51.6

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcC
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQH   66 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~   66 (90)
                      ++|+|++ |..||...........+.....  ...+...++.+.+++..||..||.+||++.+++++
T Consensus       194 il~~l~~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~  258 (268)
T 3sxs_A          194 LMWEVFSLGKMPYDLYTNSEVVLKVSQGHR--LYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSS  258 (268)
T ss_dssp             HHHHHHTTTCCTTTTSCHHHHHHHHHTTCC--CCCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHcCCCCCccccChHHHHHHHHcCCC--CCCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            3678998 9999999888877777666532  22345678999999999999999999999998754

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=98.86  E-value=1.8e-09  Score=60.61  Aligned_cols=64  Identities=17%  Similarity=0.169  Sum_probs=52.0

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcC
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQH   66 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~   66 (90)
                      ++|+|++ |..||...........+.....  ...+...++.+.+++..||..+|.+||++.++++|
T Consensus       210 ~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~  274 (283)
T 3gen_A          210 LMWEIYSLGKMPYERFTNSETAEHIAQGLR--LYRPHLASEKVYTIMYSCWHEKADERPTFKILLSN  274 (283)
T ss_dssp             HHHHHHTTTCCTTTTSCHHHHHHHHHTTCC--CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHhCCCCCccccChhHHHHHHhcccC--CCCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence            3678998 9999999888877777766532  22345678999999999999999999999998754

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=98.85  E-value=2.2e-09  Score=59.64  Aligned_cols=63  Identities=17%  Similarity=0.250  Sum_probs=51.1

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      ++|+|++ |..||.+.........+.....  ...+...+..+.+++..||..||.+||++.+++.
T Consensus       194 il~~l~~~g~~p~~~~~~~~~~~~i~~~~~--~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~  257 (267)
T 3t9t_A          194 LMWEVFSEGKIPYENRSNSEVVEDISTGFR--LYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLR  257 (267)
T ss_dssp             HHHHHHTTSCCTTTTCCHHHHHHHHHTTCC--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHhccCCCCCCCCCHHHHHHHHhcCCc--CCCCccCcHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            3678998 8999999888877777766532  2234567999999999999999999999998864

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=98.85  E-value=2e-09  Score=61.65  Aligned_cols=64  Identities=14%  Similarity=0.284  Sum_probs=51.9

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcC
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQH   66 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~   66 (90)
                      ++|+|++ |..||.+.........+.....  ...+..+++++.+++..||..||.+||++.+++.+
T Consensus       230 il~ellt~g~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  294 (327)
T 1fvr_A          230 LLWEIVSLGGTPYCGMTCAELYEKLPQGYR--LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS  294 (327)
T ss_dssp             HHHHHHTTSCCTTTTCCHHHHHHHGGGTCC--CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHcCCCCCCCCCcHHHHHHHhhcCCC--CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            3678998 9999999888877777766532  23345779999999999999999999999888753

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=98.84  E-value=2.8e-09  Score=59.90  Aligned_cols=64  Identities=17%  Similarity=0.271  Sum_probs=51.8

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      ++|+|++ |..||.+.+.......+..... ....+..++.++.+++..||..||.+||++.++++
T Consensus       213 il~~l~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  277 (291)
T 1u46_A          213 TLWEMFTYGQEPWIGLNGSQILHKIDKEGE-RLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRD  277 (291)
T ss_dssp             HHHHHHTTSCCTTTTCCHHHHHHHHHTSCC-CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHhCCCCCcccCCHHHHHHHHHccCC-CCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence            3678998 9999999888877777665432 23334578999999999999999999999999874

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=98.81  E-value=4.7e-09  Score=60.22  Aligned_cols=63  Identities=16%  Similarity=0.300  Sum_probs=51.5

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      ++|+|++ |..||.+.........+....  ....+..+++.+.+++..||..||.+||++.++++
T Consensus       243 il~ell~~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~  306 (325)
T 3kul_A          243 VMWEVLAYGERPYWNMTNRDVISSVEEGY--RLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVS  306 (325)
T ss_dssp             HHHHHHTTSCCTTTTSCHHHHHHHHHTTC--CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHcCCCCCcccCCHHHHHHHHHcCC--CCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            3678888 999999988888877776653  23335578999999999999999999999988763

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=98.81  E-value=3.5e-09  Score=60.78  Aligned_cols=63  Identities=13%  Similarity=0.219  Sum_probs=51.8

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      ++|+|++ |..||.+.........+..+..+  ..+..++.++.+++..||..||.+||++.++++
T Consensus       265 il~el~t~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~  328 (343)
T 1luf_A          265 VLWEIFSYGLQPYYGMAHEEVIYYVRDGNIL--ACPENCPLELYNLMRLCWSKLPADRPSFCSIHR  328 (343)
T ss_dssp             HHHHHHTTTCCTTTTSCHHHHHHHHHTTCCC--CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHhcCCCcCCCCChHHHHHHHhCCCcC--CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence            3688998 99999998888877777766432  334578999999999999999999999988864

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=98.81  E-value=1.8e-09  Score=61.29  Aligned_cols=64  Identities=16%  Similarity=0.327  Sum_probs=50.7

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcC
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQH   66 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~   66 (90)
                      ++|+|++ |..||.+.........+.....  ...+..+++++.+++..||..||.+||++.+++.+
T Consensus       241 il~el~t~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~  305 (314)
T 2ivs_A          241 LLWEIVTLGGNPYPGIPPERLFNLLKTGHR--MERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKD  305 (314)
T ss_dssp             HHHHHHTTSCCSSTTCCGGGHHHHHHTTCC--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHhCCCCCCCCCCHHHHHHHhhcCCc--CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            3678998 9999998877666666655532  23345789999999999999999999999988653

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=98.80  E-value=4.2e-09  Score=62.94  Aligned_cols=63  Identities=16%  Similarity=0.276  Sum_probs=51.4

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      ++|||++ |..||.+.+.......+..+.  ....+..+++++.+++..||..||.+||++.+++.
T Consensus       374 ~l~el~t~g~~P~~~~~~~~~~~~i~~~~--~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~  437 (454)
T 1qcf_A          374 LLMEIVTYGRIPYPGMSNPEVIRALERGY--RMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQS  437 (454)
T ss_dssp             HHHHHHTTSCCSSTTCCHHHHHHHHHHTC--CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHhCCCCCCCCCCHHHHHHHHHcCC--CCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHH
Confidence            3688998 999999988887777776653  23335678999999999999999999999988753

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=98.80  E-value=3.7e-09  Score=61.86  Aligned_cols=64  Identities=16%  Similarity=0.283  Sum_probs=52.0

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcC
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQH   66 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~   66 (90)
                      ++|+|++ |..||.+.........+.....  ...+..++.++.+++..||..||.+||++.+++++
T Consensus       282 il~ellt~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  346 (382)
T 3tt0_A          282 LLWEIFTLGGSPYPGVPVEELFKLLKEGHR--MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED  346 (382)
T ss_dssp             HHHHHHTTSCCSSTTCCHHHHHHHHHTTCC--CCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHhCCCCCCCCCCHHHHHHHHHcCCC--CCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            3678998 9999999888877777766543  23345789999999999999999999999888653

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=98.80  E-value=2.1e-09  Score=60.37  Aligned_cols=62  Identities=23%  Similarity=0.313  Sum_probs=49.7

Q ss_pred             EEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          2 VVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         2 l~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      +|+|++ |..||.+.........+.....  ...+..+++.+.+++..||..||.+||++.+++.
T Consensus       207 l~ell~~g~~pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  269 (281)
T 1mp8_A          207 MWEILMHGVKPFQGVKNNDVIGRIENGER--LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKA  269 (281)
T ss_dssp             HHHHHTTSCCTTTTCCGGGHHHHHHTTCC--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHhcCCCCCCcCCHHHHHHHHHcCCC--CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            678886 9999998877666666666532  2334578999999999999999999999998864

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=98.79  E-value=5.6e-09  Score=61.04  Aligned_cols=62  Identities=16%  Similarity=0.201  Sum_probs=50.1

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHh
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELL   64 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~   64 (90)
                      ++|||++ |..||.+.........+..+..  ...+...++++.+++..||..||.+||++.+++
T Consensus       304 il~el~t~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~  366 (377)
T 3cbl_A          304 LLWETFSLGASPYPNLSNQQTREFVEKGGR--LPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIY  366 (377)
T ss_dssp             HHHHHHTTSCCSSTTSCHHHHHHHHHTTCC--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             HHHHHHhCCCCCCCCCCHHHHHHHHHcCCC--CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHH
Confidence            3678997 9999999888777666665532  333556799999999999999999999998875

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=98.78  E-value=7.1e-09  Score=58.04  Aligned_cols=63  Identities=14%  Similarity=0.201  Sum_probs=50.7

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      ++|+|++ |..||.+.........+.....  ...+..++..+.+++..||..||.+||++.++++
T Consensus       199 il~el~~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  262 (279)
T 1qpc_A          199 LLTEIVTHGRIPYPGMTNPEVIQNLERGYR--MVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRS  262 (279)
T ss_dssp             HHHHHHTTTCCSSTTCCHHHHHHHHHTTCC--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHhCCCCCCcccCHHHHHHHHhcccC--CCCcccccHHHHHHHHHHhccChhhCCCHHHHHH
Confidence            3678998 9999999888777777665532  2334578999999999999999999999988764

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=98.78  E-value=5.3e-09  Score=59.49  Aligned_cols=64  Identities=17%  Similarity=0.207  Sum_probs=51.0

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      ++|+|++|..||.+.........+.....+... ...++.++.+++..||..||.+||++.+++.
T Consensus       232 il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~  295 (319)
T 2y4i_B          232 IWYELHAREWPFKTQPAEAIIWQMGTGMKPNLS-QIGMGKEISDILLFCWAFEQEERPTFTKLMD  295 (319)
T ss_dssp             HHHHHHHSSCSSSSCCHHHHHHHHHTTCCCCCC-CSSCCTTHHHHHHHHHCSSTTTSCCHHHHHH
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHhccCCCCCCC-cCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence            368999999999998887777776665433222 2357889999999999999999999998864

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=98.77  E-value=4.7e-09  Score=59.84  Aligned_cols=64  Identities=16%  Similarity=0.216  Sum_probs=51.7

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcC
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQH   66 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~   66 (90)
                      ++|+|++ |..||.+.........+.....  ...+..++..+.+++..||..||.+||++.+++++
T Consensus       229 il~el~~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~  293 (322)
T 1p4o_A          229 VLWEIATLAEQPYQGLSNEQVLRFVMEGGL--LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS  293 (322)
T ss_dssp             HHHHHHHTSCCTTTTSCHHHHHHHHHTTCC--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHhcCCCccccCCHHHHHHHHHcCCc--CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            3678898 8999999888877777766543  22345789999999999999999999999988764

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=98.77  E-value=2.6e-09  Score=59.94  Aligned_cols=64  Identities=22%  Similarity=0.305  Sum_probs=48.8

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcC
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQH   66 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~   66 (90)
                      ++|+|++ |..||...........+.....  ...+..+++.+.+++..||..||.+||++.+++.+
T Consensus       203 il~~llt~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~  267 (281)
T 3cc6_A          203 CMWEILSFGKQPFFWLENKDVIGVLEKGDR--LPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCS  267 (281)
T ss_dssp             HHHHHHTTTCCTTTTSCGGGHHHHHHHTCC--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHhCCCCCcccCChHHHHHHHhcCCC--CCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHH
Confidence            3678998 9999987666555555554432  22345679999999999999999999999988743

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=98.77  E-value=7.3e-09  Score=61.89  Aligned_cols=63  Identities=13%  Similarity=0.221  Sum_probs=51.5

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      ++|+|++ |..||.+.........+..+..  ...+..+++.+.+++..||..||.+||++.+++.
T Consensus       370 ~l~el~t~g~~P~~~~~~~~~~~~i~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~  433 (452)
T 1fmk_A          370 LLTELTTKGRVPYPGMVNREVLDQVERGYR--MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQA  433 (452)
T ss_dssp             HHHHHHTTTCCSSTTCCHHHHHHHHHTTCC--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHhCCCCCCCCCCHHHHHHHHHcCCC--CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            3688998 9999999888877777766532  3334578999999999999999999999998864

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=98.76  E-value=3e-09  Score=62.11  Aligned_cols=63  Identities=16%  Similarity=0.277  Sum_probs=50.5

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      ++|+|++ |..||.+.........+..+..  ...+..++.++.+++..||..||.+||++.+++.
T Consensus       294 il~ellt~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~  357 (370)
T 2psq_A          294 LMWEIFTLGGSPYPGIPVEELFKLLKEGHR--MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE  357 (370)
T ss_dssp             HHHHHHTTSCCSSTTCCGGGHHHHHHTTCC--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHcCCCCCCCCCCHHHHHHHHhcCCC--CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            3688998 9999998877766666665532  2334578999999999999999999999998864

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=98.76  E-value=9.1e-09  Score=59.19  Aligned_cols=63  Identities=16%  Similarity=0.309  Sum_probs=50.5

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      ++|+|++ |..||.+.........+..+..  ...+..++..+.+++..||..+|.+||++.++++
T Consensus       239 il~ellt~g~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  302 (333)
T 1mqb_A          239 VMWEVMTYGERPYWELSNHEVMKAINDGFR--LPTPMDCPSAIYQLMMQCWQQERARRPKFADIVS  302 (333)
T ss_dssp             HHHHHHTTSCCTTTTCCHHHHHHHHHTTCC--CCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             HHHHHHcCCCCCcccCCHHHHHHHHHCCCc--CCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            3678888 9999999888777777766532  2334567999999999999999999999888764

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=98.75  E-value=6.1e-09  Score=59.80  Aligned_cols=63  Identities=16%  Similarity=0.277  Sum_probs=50.9

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      ++|+|++ |..||.+.........+.....  ...+..++.++.+++..||..+|.+||++.+++.
T Consensus       248 il~ellt~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  311 (334)
T 2pvf_A          248 LMWEIFTLGGSPYPGIPVEELFKLLKEGHR--MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE  311 (334)
T ss_dssp             HHHHHHTTSCCSSTTCCHHHHHHHHHHTCC--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHhCCCCCcCcCCHHHHHHHHhcCCC--CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            3678998 9999999888777766665532  2234568999999999999999999999988864

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=98.75  E-value=2.2e-09  Score=62.00  Aligned_cols=64  Identities=20%  Similarity=0.372  Sum_probs=47.6

Q ss_pred             CEEeeec-CCCCCCCCCHH-HHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcC
Q psy10832          1 MVVEMVD-GEPPFFNEPPL-QAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQH   66 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~   66 (90)
                      ++|+|++ |..||.+.... .....+....  ....+..+++++.+++..||..||.+||++.+++.|
T Consensus       284 il~ellt~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  349 (359)
T 3vhe_A          284 LLWEIFSLGASPYPGVKIDEEFCRRLKEGT--RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  349 (359)
T ss_dssp             HHHHHTTTSCCSSTTCCCSHHHHHHHHHTC--CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHhcCCCCCCccchhHHHHHHHHcCC--CCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence            3688998 99999886533 3333343332  223345689999999999999999999999998754

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=98.74  E-value=4e-10  Score=64.28  Aligned_cols=66  Identities=12%  Similarity=0.304  Sum_probs=44.3

Q ss_pred             EEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccc
Q psy10832          2 VVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQ   71 (90)
Q Consensus         2 l~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~   71 (90)
                      +|+|++|..|+..  .......+.....+  ......++++.+++.+||..||.+||++.++++|+||++
T Consensus       266 l~el~~~~~~~~~--~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~f~~  331 (332)
T 3qd2_B          266 LFELLYSFSTQME--RVRIITDVRNLKFP--LLFTQKYPQEHMMVQDMLSPSPTERPEATDIIENAIFEN  331 (332)
T ss_dssp             HHHHHSCCCCHHH--HHHHHHHHHTTCCC--HHHHHHCHHHHHHHHHHHCSSGGGSCCHHHHHHSTTCCC
T ss_pred             HHHHHHcCCChhH--HHHHHHHhhccCCC--cccccCChhHHHHHHHHccCCCCcCCCHHHHhhchhhhc
Confidence            5778887655432  11222222233111  111235678899999999999999999999999999985

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=98.74  E-value=3.4e-09  Score=60.94  Aligned_cols=66  Identities=12%  Similarity=0.154  Sum_probs=48.0

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCc
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHP   67 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~   67 (90)
                      ++|+|++ |..||.+.........+..... ....+...++++.+++..||..||.+||++.+++.+-
T Consensus       263 il~el~t~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l  329 (344)
T 1rjb_A          263 LLWEIFSLGVNPYPGIPVDANFYKLIQNGF-KMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFL  329 (344)
T ss_dssp             HHHHHTTTSCCSSTTCCCSHHHHHHHHTTC-CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             HHHHHHcCCCCCcccCCcHHHHHHHHhcCC-CCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHH
Confidence            3688997 9999988654333333333221 2233456799999999999999999999999988654

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=98.74  E-value=3.6e-09  Score=60.70  Aligned_cols=64  Identities=16%  Similarity=0.187  Sum_probs=49.9

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcC
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQH   66 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~   66 (90)
                      ++|+|++ |..||.+.........+....  ....+...+.++.+++..||..+|.+||++.+++.+
T Consensus       208 il~ellt~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  272 (327)
T 3poz_A          208 TVWELMTFGSKPYDGIPASEISSILEKGE--RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIE  272 (327)
T ss_dssp             HHHHHHTTSCCTTTTCCGGGHHHHHHTTC--CCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHH
T ss_pred             HHHHHHhcCCCCccCCCHHHHHHHHHcCC--CCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence            3688998 999999877666655555543  223345679999999999999999999999887643

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=98.74  E-value=4.9e-09  Score=60.21  Aligned_cols=63  Identities=16%  Similarity=0.200  Sum_probs=49.6

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      ++|+|++ |..||.+.........+....  ....+..++.++.+++..||..||.+||++.+++.
T Consensus       208 il~ell~~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  271 (327)
T 3lzb_A          208 TVWELMTFGSKPYDGIPASEISSILEKGE--RLPQPPICTIDVYMIMRKCWMIDADSRPKFRELII  271 (327)
T ss_dssp             HHHHHHTTSCCTTTTCCGGGHHHHHHTTC--CCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHCCCCCCCCCCHHHHHHHHHcCC--CCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            3688998 999999887766666665543  23334568999999999999999999999888764

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=98.74  E-value=1.5e-08  Score=62.89  Aligned_cols=62  Identities=10%  Similarity=0.093  Sum_probs=51.7

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHh
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELL   64 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~   64 (90)
                      ++|||++ |..||.+.+.......+..+..  ...+..++.++.+++..||..||.+||++.+++
T Consensus       561 ~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~--~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~  623 (635)
T 4fl3_A          561 LMWEAFSYGQKPYRGMKGSEVTAMLEKGER--MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVE  623 (635)
T ss_dssp             HHHHHHTTTCCSSTTCCHHHHHHHHHTTCC--CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred             HHHHHHhCCCCCCCCCCHHHHHHHHHcCCC--CCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHH
Confidence            3688998 9999999988888777776643  333567899999999999999999999998875

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=98.73  E-value=5.7e-09  Score=58.45  Aligned_cols=63  Identities=16%  Similarity=0.253  Sum_probs=49.5

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      ++|+|++ |..||...........+....  ....+..+++.+.+++..||..||.+||++.+++.
T Consensus       203 il~~l~t~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  266 (278)
T 1byg_A          203 LLWEIYSFGRVPYPRIPLKDVVPRVEKGY--KMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLRE  266 (278)
T ss_dssp             HHHHHHTTSCCSCTTSCGGGHHHHHTTTC--CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHhCCCCCCCCCCHHHHHHHHhcCC--CCCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHH
Confidence            3678997 999999877766666665543  23334578999999999999999999999988763

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=98.72  E-value=3.8e-09  Score=60.03  Aligned_cols=63  Identities=19%  Similarity=0.183  Sum_probs=50.0

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      ++|+|++ |..||.+.........+.....  ...+..+++++.+++..||..||.+||++.+++.
T Consensus       238 il~el~~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  301 (313)
T 3brb_A          238 TMWEIATRGMTPYPGVQNHEMYDYLLHGHR--LKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRL  301 (313)
T ss_dssp             HHHHHHTTSCCSSTTCCGGGHHHHHHTTCC--CCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHhcCCCCCccCCHHHHHHHHHcCCC--CCCCccccHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            3678999 8999998777666666655532  2334578999999999999999999999998864

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=98.72  E-value=4.6e-09  Score=59.80  Aligned_cols=64  Identities=17%  Similarity=0.300  Sum_probs=47.8

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCC-CHHHHh
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRA-TAAELL   64 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~-~~~~l~   64 (90)
                      ++|+|++|..||.+.........+..........+..++.++.+++.+||..||.+|+ ++++++
T Consensus       224 il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~  288 (309)
T 2h34_A          224 VLYECLTGSPPYQGDQLSVMGAHINQAIPRPSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLS  288 (309)
T ss_dssp             HHHHHHHSSCSSCSCHHHHHHHHHHSCCCCGGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHH
T ss_pred             HHHHHHHCCCCCCCchHHHHHHHhccCCCCccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHH
Confidence            3689999999999876664444444433222233457899999999999999999999 777765

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=98.71  E-value=1.3e-08  Score=62.94  Aligned_cols=62  Identities=13%  Similarity=0.158  Sum_probs=50.9

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHh
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELL   64 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~   64 (90)
                      ++|||++ |..||.+.+.......+..+..  ...+..+++++.+++..||..+|.+||++.+++
T Consensus       528 ~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~--~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~  590 (613)
T 2ozo_A          528 TMWEALSYGQKPYKKMKGPEVMAFIEQGKR--MECPPECPPELYALMSDCWIYKWEDRPDFLTVE  590 (613)
T ss_dssp             HHHHHHTTSCCTTTTCCSHHHHHHHHTTCC--CCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHH
T ss_pred             HHHHHHHCCCCCCCCCCHHHHHHHHHcCCC--CCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHH
Confidence            3689997 9999999887777777776643  334567899999999999999999999988874

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=98.71  E-value=6.2e-09  Score=62.18  Aligned_cols=62  Identities=18%  Similarity=0.263  Sum_probs=49.7

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHh
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELL   64 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~   64 (90)
                      ++|||++ |..||.+.........+..+.  ....+..+++++.+++..||..||.+||++.+++
T Consensus       375 ~l~el~t~g~~P~~~~~~~~~~~~i~~~~--~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~  437 (450)
T 1k9a_A          375 LLWEIYSFGRVPYPRIPLKDVVPRVEKGY--KMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLR  437 (450)
T ss_dssp             HHHHHHTTTCCSSTTSCTTTHHHHHHTTC--CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             HHHHHHhCCCCCCCCCCHHHHHHHHHcCC--CCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHH
Confidence            3688998 999999877666666666553  2334567899999999999999999999998875

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=98.70  E-value=1.6e-08  Score=61.64  Aligned_cols=63  Identities=13%  Similarity=0.240  Sum_probs=51.6

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      ++|||++ |..||.+.........+..+.  ....+..++.++.++|..||..||.+||++.+++.
T Consensus       453 ~l~el~t~g~~P~~~~~~~~~~~~i~~~~--~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~  516 (535)
T 2h8h_A          453 LLTELTTKGRVPYPGMVNREVLDQVERGY--RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQA  516 (535)
T ss_dssp             HHHHHTTTTCCSSTTCCHHHHHHHHHTTC--CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHhCCCCCCCCCCHHHHHHHHHcCC--CCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            3689999 999999988887777776653  23334578999999999999999999999998864

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=98.70  E-value=2.6e-09  Score=61.18  Aligned_cols=64  Identities=16%  Similarity=0.130  Sum_probs=49.5

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcC
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQH   66 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~   66 (90)
                      ++|+|++ |..||.+.........+.....  ...+...+.++.+++.+||..||.+||++.+++.+
T Consensus       206 ~l~el~~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~  270 (325)
T 3kex_A          206 TVWELMTFGAEPYAGLRLAEVPDLLEKGER--LAQPQICTIDVYMVMVKCWMIDENIRPTFKELANE  270 (325)
T ss_dssp             HHHHHHTTSCCTTTTSCTTHHHHHHHTTCB--CCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHH
T ss_pred             HHHHHHhCCCCCccccCHHHHHHHHHcCCC--CCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            3688999 9999998776666666655532  22344578889999999999999999999887653

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=98.69  E-value=9.8e-09  Score=57.65  Aligned_cols=63  Identities=14%  Similarity=0.230  Sum_probs=49.2

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      ++|+|++ |..||.+.+.......+....  ....+..+++.+.+++..||..||.+||++.++++
T Consensus       201 il~~ll~~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~  264 (288)
T 3kfa_A          201 LLWEIATYGMSPYPGIDLSQVYELLEKDY--RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ  264 (288)
T ss_dssp             HHHHHHTTSCCSSTTCCGGGHHHHHHTTC--CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHhCCCCCCCCCCHHHHHHHHhccC--CCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHH
Confidence            3678898 999999877666655555442  23334678999999999999999999999998864

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=98.68  E-value=8.2e-09  Score=58.00  Aligned_cols=64  Identities=20%  Similarity=0.359  Sum_probs=46.5

Q ss_pred             CEEeeecCCCCCCCCC--HHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          1 MVVEMVDGEPPFFNEP--PLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         1 il~~~~~g~~p~~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      ++|+|++|..||....  .......+..... ....+..+++++.+++..||..||.+||++.++++
T Consensus       217 ~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  282 (287)
T 4f0f_A          217 ILYTILTGEGPFDEYSYGKIKFINMIREEGL-RPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVK  282 (287)
T ss_dssp             HHHHHHHSSCTTTTCCCCHHHHHHHHHHSCC-CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHcCCCCCccccccHHHHHHHHhccCC-CCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence            3689999999998753  2222333333322 23335678999999999999999999999998864

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=98.64  E-value=1.5e-08  Score=61.22  Aligned_cols=63  Identities=14%  Similarity=0.230  Sum_probs=49.8

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      ++|||++ |..||.+.+.......+....  ....+..+++.+.+++..||..||.+||++.++++
T Consensus       408 ~l~el~t~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~  471 (495)
T 1opk_A          408 LLWEIATYGMSPYPGIDLSQVYELLEKDY--RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ  471 (495)
T ss_dssp             HHHHHHTTSCCSSTTCCGGGHHHHHHTTC--CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHhCCCCCCCCCCHHHHHHHHHcCC--CCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHH
Confidence            3688998 999999887666665555443  23345678999999999999999999999998863

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=98.64  E-value=6.8e-09  Score=58.93  Aligned_cols=64  Identities=20%  Similarity=0.359  Sum_probs=47.1

Q ss_pred             CEEeeec-CCCCCCCCCH-HHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcC
Q psy10832          1 MVVEMVD-GEPPFFNEPP-LQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQH   66 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~   66 (90)
                      ++|+|++ |..||.+... ......+.....  ...+..+++++.+++..||..||.+||++.+++.|
T Consensus       239 il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  304 (316)
T 2xir_A          239 LLWEIFSLGASPYPGVKIDEEFCRRLKEGTR--MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  304 (316)
T ss_dssp             HHHHHHTTSCCSSTTCCCSHHHHHHHHHTCC--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHhCCCCCCcccchhHHHHHHhccCcc--CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            3678997 9999987643 333334444322  23345679999999999999999999999998765

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=98.64  E-value=7.1e-09  Score=58.79  Aligned_cols=63  Identities=17%  Similarity=0.356  Sum_probs=45.7

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHH-hhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRR-IRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      ++|+|++ |..||.+......... +....  ....+..++.++.+++..||..||.+||++.++++
T Consensus       236 il~ellt~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  300 (313)
T 1t46_A          236 FLWELFSLGSSPYPGMPVDSKFYKMIKEGF--RMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ  300 (313)
T ss_dssp             HHHHHHTTTCCSSTTCCSSHHHHHHHHHTC--CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHhCCCCCCCcccchhHHHHHhccCC--CCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence            3678998 9999988654333333 32222  22224567999999999999999999999998874

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=98.63  E-value=1.3e-08  Score=57.36  Aligned_cols=65  Identities=17%  Similarity=0.273  Sum_probs=46.3

Q ss_pred             CEEeeecCCCCCCCCCHH-HHHHHhhcCCC-C-CCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          1 MVVEMVDGEPPFFNEPPL-QAMRRIRDMPP-P-KLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~-~~~~~i~~~~~-~-~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      ++|+|++|..||.+.... .....+..... + .......+++++.+++..||..+|.+||++.+++.
T Consensus       214 il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~  281 (289)
T 3og7_A          214 VLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILA  281 (289)
T ss_dssp             HHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHCCCCccccchHHHHHHHhcccccCcchhhccccCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            368899999999885443 33333333322 1 11223467899999999999999999999988863

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=98.62  E-value=1e-08  Score=58.37  Aligned_cols=63  Identities=17%  Similarity=0.367  Sum_probs=45.9

Q ss_pred             CEEeeecCCCCCCCC--CHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          1 MVVEMVDGEPPFFNE--PPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         1 il~~~~~g~~p~~~~--~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      ++|+|++|..||...  ........+.....  ...+..++..+.+++.+||..||.+||++.++++
T Consensus       192 il~el~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  256 (307)
T 2eva_A          192 ILWEVITRRKPFDEIGGPAFRIMWAVHNGTR--PPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVK  256 (307)
T ss_dssp             HHHHHHHTCCTTTTTCSSHHHHHHHHHTTCC--CCCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHCCCCchhhCccHHHHHHHHhcCCC--CCcccccCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence            368999999999864  33333333333322  2234567999999999999999999999988765

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=98.62  E-value=9.7e-09  Score=58.82  Aligned_cols=64  Identities=9%  Similarity=0.149  Sum_probs=45.8

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      ++|+|++ |..||.+.........+..... ....+...+..+.+++..||..||.+||++.++++
T Consensus       255 il~el~t~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  319 (333)
T 2i1m_A          255 LLWEIFSLGLNPYPGILVNSKFYKLVKDGY-QMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICS  319 (333)
T ss_dssp             HHHHHTTTSCCSSTTCCSSHHHHHHHHHTC-CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHcCCCCCCcccchhHHHHHHHhcCC-CCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence            3678998 9999988654433333332211 22234557899999999999999999999999864

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=98.61  E-value=3.5e-08  Score=61.51  Aligned_cols=63  Identities=22%  Similarity=0.304  Sum_probs=51.4

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      ++|+|++ |..||.+.........+..+..  ...+..+++.+.+++..||..||.+||++.+++.
T Consensus       581 il~ellt~g~~Pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~  644 (656)
T 2j0j_A          581 CMWEILMHGVKPFQGVKNNDVIGRIENGER--LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKA  644 (656)
T ss_dssp             HHHHHHTTSCCTTTTCCHHHHHHHHHHTCC--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHcCCCCCCCCCHHHHHHHHHcCCC--CCCCccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            3678886 9999999888887777766543  2335578999999999999999999999988863

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=98.60  E-value=1.1e-08  Score=59.87  Aligned_cols=63  Identities=14%  Similarity=0.200  Sum_probs=47.6

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      ++|+|++ |.+||.+.+.......+..+..  ...+..++..+.+++..||..||.+||++.++++
T Consensus       285 il~ellt~~~~p~~~~~~~~~~~~~~~~~~--~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~  348 (373)
T 3c1x_A          285 LLWELMTRGAPPYPDVNTFDITVYLLQGRR--LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS  348 (373)
T ss_dssp             HHHHHHTTSCCSCTTSCSSCHHHHHHTTCC--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHhCcCCCCCCCCHHHHHHHHHcCCC--CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            3688998 7889987655555555555432  2234567999999999999999999999988764

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=98.59  E-value=2.5e-08  Score=58.35  Aligned_cols=63  Identities=13%  Similarity=0.260  Sum_probs=48.2

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      ++|+|++ |..||.+.........+.....  ...+..++..+.+++..||..||.+||++.+++.
T Consensus       239 il~ellt~g~~P~~~~~~~~~~~~i~~~~~--~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~  302 (373)
T 2qol_A          239 VLWEVMSYGERPYWEMSNQDVIKAVDEGYR--LPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS  302 (373)
T ss_dssp             HHHHHHTTC-CTTTTCCHHHHHHHHHTTEE--CCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHhCCCCCCCCCCHHHHHHHHHcCCC--CCCCccccHHHHHHHHHHhCcChhhCcCHHHHHH
Confidence            3678887 9999999888777776655422  2224567899999999999999999999887653

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=98.59  E-value=2.6e-08  Score=56.14  Aligned_cols=63  Identities=19%  Similarity=0.305  Sum_probs=46.7

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      ++|+|++ |.+||...+.......+.....  ...+..+++.+.+++..||..||.+||++.+++.
T Consensus       217 il~~l~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~  280 (298)
T 3pls_A          217 LLWELLTRGAPPYRHIDPFDLTHFLAQGRR--LPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVG  280 (298)
T ss_dssp             HHHHHHHTSCCTTTTSCGGGHHHHHHTTCC--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHhhCCCCCCccCCHHHHHHHhhcCCC--CCCCccchHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            3678888 5566666666666656555532  3334567999999999999999999999888753

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=98.57  E-value=2.7e-09  Score=60.90  Aligned_cols=67  Identities=15%  Similarity=0.142  Sum_probs=44.7

Q ss_pred             CEEeeecCCCCCCCC----CHHHHHHHhhcCCCC------------------CCCC----CCCCCHHHHHHHHHhhccCC
Q psy10832          1 MVVEMVDGEPPFFNE----PPLQAMRRIRDMPPP------------------KLKN----THKVSPRLQGFLERLLVRDP   54 (90)
Q Consensus         1 il~~~~~g~~p~~~~----~~~~~~~~i~~~~~~------------------~~~~----~~~~~~~~~~~i~~~l~~~p   54 (90)
                      ++|+|++|..||...    ........+..+.++                  ..+.    ...++..+.+++.+||..||
T Consensus       212 il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP  291 (319)
T 4euu_A          212 TFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQ  291 (319)
T ss_dssp             HHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCT
T ss_pred             HHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCCh
Confidence            368999999999743    223334444332211                  0111    11234578899999999999


Q ss_pred             CCCCCHHHHhcCc
Q psy10832         55 LQRATAAELLQHP   67 (90)
Q Consensus        55 ~~R~~~~~l~~~~   67 (90)
                      .+|+++.++++|+
T Consensus       292 ~~R~s~~ell~h~  304 (319)
T 4euu_A          292 EKCWGFDQFFAET  304 (319)
T ss_dssp             TTSCCHHHHHHHH
T ss_pred             hhhccHHHhhhcc
Confidence            9999999999887

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=98.57  E-value=2.8e-08  Score=56.09  Aligned_cols=62  Identities=15%  Similarity=0.188  Sum_probs=46.9

Q ss_pred             EEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          2 VVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         2 l~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      +|+|++ |.+||.+.+.......+.....  ...+..++..+.+++..||..||.+||++.++++
T Consensus       222 l~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~  284 (298)
T 3f66_A          222 LWELMTRGAPPYPDVNTFDITVYLLQGRR--LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS  284 (298)
T ss_dssp             HHHHHTTSCCSSTTSCTTTHHHHHHTTCC--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHhCCCCCCccCCHHHHHHHHhcCCC--CCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            578888 6778887666555555555432  2224567899999999999999999999988764

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=98.55  E-value=6.6e-08  Score=54.87  Aligned_cols=64  Identities=19%  Similarity=0.360  Sum_probs=46.1

Q ss_pred             CEEeeecCCCCCCCC--CHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          1 MVVEMVDGEPPFFNE--PPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         1 il~~~~~g~~p~~~~--~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      ++|+|++|..||.+.  ........+.....+... ...+++++.+++..||..||.+||++.++++
T Consensus       225 il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~~l~~dp~~Rps~~~il~  290 (310)
T 2wqm_A          225 LLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLP-SDHYSEELRQLVNMCINPDPEKRPDVTYVYD  290 (310)
T ss_dssp             HHHHHHHSSCTTC---CCHHHHHHHHHTTCSCCCC-TTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHhCCCCCcccchhHHHHHHHhhcccCCCCc-ccccCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            368899999999764  344444555544332222 3467999999999999999999999998864

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=98.54  E-value=3.5e-09  Score=66.18  Aligned_cols=34  Identities=18%  Similarity=0.266  Sum_probs=28.8

Q ss_pred             CCHHHHHHHHHhhccCCCCCCCHHHHhcCccccc
Q psy10832         38 VSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQ   71 (90)
Q Consensus        38 ~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~   71 (90)
                      +++.+.+++..||..||.+||++.+++.|+||..
T Consensus       270 ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~  303 (676)
T 3qa8_A          270 LAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQA  303 (676)
T ss_dssp             GHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHH
T ss_pred             hhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHH
Confidence            5678999999999999999999999999999885

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=98.53  E-value=7.8e-09  Score=58.21  Aligned_cols=65  Identities=14%  Similarity=0.063  Sum_probs=42.5

Q ss_pred             CEEeeecCCCCCCCCCH---HHHHHHhhcCC--CCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          1 MVVEMVDGEPPFFNEPP---LQAMRRIRDMP--PPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~---~~~~~~i~~~~--~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      ++|+|++|..||.+...   ......+....  .+.......+++++.+++..||..||.+||++.++++
T Consensus       204 il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  273 (296)
T 3uzp_A          204 VLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             HHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred             HHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCchHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHH
Confidence            36899999999986321   11112221110  0111112467899999999999999999999888753

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=98.52  E-value=1.1e-08  Score=57.59  Aligned_cols=64  Identities=11%  Similarity=0.049  Sum_probs=44.4

Q ss_pred             CEEeeecCCCCCCCC---CHHHHHHHhhcCC--CCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHh
Q psy10832          1 MVVEMVDGEPPFFNE---PPLQAMRRIRDMP--PPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELL   64 (90)
Q Consensus         1 il~~~~~g~~p~~~~---~~~~~~~~i~~~~--~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~   64 (90)
                      ++|+|++|..||.+.   ........+....  .+.......+++++.+++..||..||.+||++.++.
T Consensus       207 il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~  275 (298)
T 1csn_A          207 VFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQ  275 (298)
T ss_dssp             HHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHH
T ss_pred             HHHHHHcCCCCcchhhccccHHHHHHHHhhccCccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHH
Confidence            368999999999874   3333333332211  111112346789999999999999999999988875

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=98.50  E-value=1.7e-08  Score=56.73  Aligned_cols=62  Identities=11%  Similarity=0.224  Sum_probs=43.6

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcC
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQH   66 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~   66 (90)
                      ++|+|++ |.+||...............    ...+...+.++.+++..||..||.+||++.+++++
T Consensus       207 il~el~~g~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  269 (289)
T 4fvq_A          207 TLWEICSGGDKPLSALDSQRKLQFYEDR----HQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRD  269 (289)
T ss_dssp             HHHHHHTTTCCTTTTSCHHHHHHHHHTT----CCCCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHcCCCCCccccchHHHHHHhhcc----CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            3688999 55666666655444433322    22234557889999999999999999999998753

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=98.48  E-value=4.4e-08  Score=55.44  Aligned_cols=68  Identities=19%  Similarity=0.328  Sum_probs=48.5

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCC--CCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCcc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKL--KNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPF   68 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~   68 (90)
                      ++|+|++|..||.+.+.............+..  ..+..++..+.+++.+||..||.+|++..+.+.+.|
T Consensus       201 ~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l  270 (294)
T 4eqm_A          201 VLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDL  270 (294)
T ss_dssp             HHHHHHHSSCSSCSSCHHHHHHHHHSSCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHH
T ss_pred             HHHHHHhCCCCCCCCChHHHHHHHhhccCCCcchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHH
Confidence            36899999999999887766555444432221  224567899999999999999999995444334444

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=98.47  E-value=3.3e-09  Score=60.36  Aligned_cols=64  Identities=20%  Similarity=0.258  Sum_probs=43.1

Q ss_pred             CEEeeecCCCCCCCCCH--HHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcC
Q psy10832          1 MVVEMVDGEPPFFNEPP--LQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQH   66 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~   66 (90)
                      ++|+|++|..||.....  ......+...  ...+.+..++.++.+++..||..||.+||++.+++++
T Consensus       235 il~el~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  300 (317)
T 2buj_A          235 VLYAMMFGEGPYDMVFQKGDSVALAVQNQ--LSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQ  300 (317)
T ss_dssp             HHHHHHHSSCTTHHHHHTTSCHHHHHHCC----CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHhCCCChhhhhcccchhhHHhhcc--CCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHH
Confidence            36889999999964210  0111122221  1222335679999999999999999999999998764

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=98.45  E-value=1.7e-08  Score=57.64  Aligned_cols=63  Identities=13%  Similarity=0.211  Sum_probs=40.4

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCcc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPF   68 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~   68 (90)
                      ++|+|++|..||.+...........     ........+..+.+++..||..||.+|+++.+++.+-.
T Consensus       242 il~el~~g~~p~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~  304 (337)
T 3ll6_A          242 ILYLLCFRQHPFEDGAKLRIVNGKY-----SIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQ  304 (337)
T ss_dssp             HHHHHHHSSCCC------------C-----CCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred             HHHHHHhCCCCCcchhHHHhhcCcc-----cCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence            3688999999998765443322211     12223456788999999999999999999999887653

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=98.44  E-value=4.5e-08  Score=56.04  Aligned_cols=63  Identities=8%  Similarity=0.104  Sum_probs=44.6

Q ss_pred             CEEeeecCCCCCCCCCHH---------------HHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          1 MVVEMVDGEPPFFNEPPL---------------QAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~---------------~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      ++|+|++|..||......               .....+....  ....+..+++++.+++..||..||.+||++.+++.
T Consensus       219 il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~  296 (327)
T 3lxl_A          219 VLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQ--RLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGP  296 (327)
T ss_dssp             HHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHTTC--CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhccc--CCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            368899999998654321               2222232332  23335678999999999999999999999998854

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=98.43  E-value=2e-08  Score=56.49  Aligned_cols=65  Identities=14%  Similarity=0.068  Sum_probs=42.4

Q ss_pred             CEEeeecCCCCCCCCCHH---HHHHHhhcCC--CCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          1 MVVEMVDGEPPFFNEPPL---QAMRRIRDMP--PPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~---~~~~~i~~~~--~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      ++|+|++|..||.+....   .....+....  .+.......+++++.+++..||..||.+||++.++++
T Consensus       204 il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~  273 (296)
T 4hgt_A          204 VLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             HHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred             HHHHHhcCCCCCcccchhhhhhhhhhhhcccccchhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHH
Confidence            368999999999864221   1111111110  0111112457899999999999999999999888753

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=98.42  E-value=5.2e-08  Score=56.27  Aligned_cols=65  Identities=12%  Similarity=0.134  Sum_probs=41.8

Q ss_pred             CEEeeecCCCCCCCC--CHHHHHHH---hhcCCCCC---CCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          1 MVVEMVDGEPPFFNE--PPLQAMRR---IRDMPPPK---LKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         1 il~~~~~g~~p~~~~--~~~~~~~~---i~~~~~~~---~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      ++|+|++|..||.+.  ........   .....+..   ......++.++.+++..||..||.+||++.++++
T Consensus       249 il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  321 (345)
T 2v62_A          249 CMLRWLCGKLPWEQNLKDPVAVQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKK  321 (345)
T ss_dssp             HHHHHHHSSCTTGGGTTCHHHHHHHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             HHHHHHhCCCCccccccccHHHHHHHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence            368999999999652  32222111   11111000   0011267899999999999999999999888753

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=98.41  E-value=1.3e-07  Score=53.35  Aligned_cols=63  Identities=10%  Similarity=0.087  Sum_probs=43.8

Q ss_pred             CEEeeecCCCCCCCCCHH----------------HHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHh
Q psy10832          1 MVVEMVDGEPPFFNEPPL----------------QAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELL   64 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~----------------~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~   64 (90)
                      ++|+|++|..|+......                .....+....  ....+..+++++.+++..||..||.+||++.+++
T Consensus       206 ~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~  283 (295)
T 3ugc_A          206 VLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNG--RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLA  283 (295)
T ss_dssp             HHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTC--CCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred             HHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHhccC--cCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHH
Confidence            367899999888753221                1222222222  2333567899999999999999999999998886


Q ss_pred             c
Q psy10832         65 Q   65 (90)
Q Consensus        65 ~   65 (90)
                      .
T Consensus       284 ~  284 (295)
T 3ugc_A          284 L  284 (295)
T ss_dssp             H
T ss_pred             H
Confidence            3

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=98.37  E-value=1.2e-07  Score=54.11  Aligned_cols=62  Identities=11%  Similarity=0.132  Sum_probs=43.9

Q ss_pred             CEEeeecCCCCCCCCCHH---------------HHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHh
Q psy10832          1 MVVEMVDGEPPFFNEPPL---------------QAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELL   64 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~---------------~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~   64 (90)
                      ++|+|++|..||......               .....+....  ....+..++.++.+++..||..||.+||++.+++
T Consensus       226 il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell  302 (318)
T 3lxp_A          226 TLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGE--RLPRPDKCPAEVYHLMKNCWETEASFRPTFENLI  302 (318)
T ss_dssp             HHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTC--CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             HHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhccc--CCCCCccccHHHHHHHHHHcCCCcccCcCHHHHH
Confidence            368899999998764221               1112222222  2333567899999999999999999999999886

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=98.36  E-value=7.9e-08  Score=55.58  Aligned_cols=65  Identities=17%  Similarity=0.153  Sum_probs=43.3

Q ss_pred             CEEeeecCCCCCCCC--CHHHHHHHhh--cCCCCCCC----CCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          1 MVVEMVDGEPPFFNE--PPLQAMRRIR--DMPPPKLK----NTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         1 il~~~~~g~~p~~~~--~~~~~~~~i~--~~~~~~~~----~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      ++|+|++|..||.+.  ..........  ........    .+..++.++.+++..||..||.+||++.++++
T Consensus       257 il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  329 (352)
T 2jii_A          257 CMLKWLYGFLPWTNCLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRN  329 (352)
T ss_dssp             HHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             HHHHHHhCCCCcccCCcCHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHH
Confidence            368999999999875  3332222221  11111111    11256899999999999999999999888753

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=98.33  E-value=5.1e-09  Score=59.25  Aligned_cols=64  Identities=14%  Similarity=0.116  Sum_probs=42.8

Q ss_pred             CEEeeecCCCCCCCCCHHHHHH---HhhcCCCCC-CCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMR---RIRDMPPPK-LKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~---~i~~~~~~~-~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      ++|+|++|..||.+.+......   .......+. ......+++++.+++.+||..||.+| ++.+++.
T Consensus       191 il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~  258 (286)
T 3uqc_A          191 SLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLN  258 (286)
T ss_dssp             HHHHHHHSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHH
T ss_pred             HHHHHHHCCCCCCcCCcchhhHHHHHHhccCCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHH
Confidence            3689999999999764432110   011111111 11234678999999999999999999 9988764

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=98.24  E-value=1.9e-07  Score=53.48  Aligned_cols=26  Identities=19%  Similarity=0.073  Sum_probs=23.3

Q ss_pred             HHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832         40 PRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus        40 ~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      .++.+++.+||..||.+||++.+++.
T Consensus       286 ~~l~~li~~cl~~dP~~Rps~~ell~  311 (322)
T 3soc_A          286 AMLCETIEECWDHDAEARLSAGCVGE  311 (322)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHHH
Confidence            45899999999999999999988863

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=98.22  E-value=8.3e-08  Score=53.67  Aligned_cols=63  Identities=17%  Similarity=0.285  Sum_probs=45.1

Q ss_pred             EEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccc
Q psy10832          2 VVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQ   71 (90)
Q Consensus         2 l~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~   71 (90)
                      +|+|++|..|+...  ......+...   .  .+..++..+.+++..||..||.+||++.+++.+.+.-.
T Consensus       211 l~~l~~~~~~~~~~--~~~~~~~~~~---~--~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~  273 (284)
T 2a19_B          211 LAELLHVCDTAFET--SKFFTDLRDG---I--ISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWK  273 (284)
T ss_dssp             HHHHHSCCSSHHHH--HHHHHHHHTT---C--CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHT
T ss_pred             HHHHHhcCCcchhH--HHHHHHhhcc---c--ccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHh
Confidence            57888888776532  1222233222   1  13457899999999999999999999999999877543

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=98.19  E-value=1.1e-06  Score=49.67  Aligned_cols=63  Identities=8%  Similarity=0.100  Sum_probs=43.0

Q ss_pred             CEEeeecCCCCCCCC--------------C-HHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          1 MVVEMVDGEPPFFNE--------------P-PLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         1 il~~~~~g~~p~~~~--------------~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      ++|+|++|..|+...              . .......+....  ....+..+++++.+++..||..||.+||++.++++
T Consensus       218 il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  295 (302)
T 4e5w_A          218 TLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGK--RLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIE  295 (302)
T ss_dssp             HHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHTTC--CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHhccC--CCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHH
Confidence            367889988875422              1 122223333332  23345678999999999999999999999988763

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=98.19  E-value=2e-07  Score=53.46  Aligned_cols=64  Identities=16%  Similarity=0.213  Sum_probs=41.6

Q ss_pred             CEEeeecCCCCCCCC---CHHHHHHHhhcCCC--CCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          1 MVVEMVDGEPPFFNE---PPLQAMRRIRDMPP--PKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         1 il~~~~~g~~p~~~~---~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      ++|+|++|..||.+.   ........+.....  +.......+ +++.+++..||..+|.+||++.++.+
T Consensus       206 il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-p~~~~li~~~l~~~p~~RP~~~~l~~  274 (330)
T 2izr_A          206 MFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCENF-PEMATYLRYVRRLDFFEKPDYDYLRK  274 (330)
T ss_dssp             HHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSCHHHHTTTC-HHHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred             HHHHHhcCCCCccccccccHHHHHHHHHhhhccCCHHHHhccC-hHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence            368999999999874   33333344332211  000011223 39999999999999999999877643

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=98.18  E-value=5.4e-07  Score=54.53  Aligned_cols=64  Identities=8%  Similarity=0.036  Sum_probs=42.9

Q ss_pred             CEEeeecCCCCCCCCC---HHHHHHHhhcCCC--CCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHh
Q psy10832          1 MVVEMVDGEPPFFNEP---PLQAMRRIRDMPP--PKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELL   64 (90)
Q Consensus         1 il~~~~~g~~p~~~~~---~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~   64 (90)
                      ++|+|++|..||.+..   .......+.....  ........++.++.+++..||..+|.+||++.+|+
T Consensus       202 il~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~  270 (483)
T 3sv0_A          202 VLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLK  270 (483)
T ss_dssp             HHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHH
T ss_pred             HHHHHHhCCCCCccccchhHHHHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHH
Confidence            4689999999998743   2333333222110  01111245789999999999999999999987654

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=98.16  E-value=5.9e-07  Score=51.43  Aligned_cols=62  Identities=10%  Similarity=0.097  Sum_probs=42.5

Q ss_pred             CEEeeecCCCCCCCCCHH----------------HHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHh
Q psy10832          1 MVVEMVDGEPPFFNEPPL----------------QAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELL   64 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~----------------~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~   64 (90)
                      ++|+|++|..|+......                .....+....  ....+..++.++.+++..||..||.+||++.+++
T Consensus       237 il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~  314 (326)
T 2w1i_A          237 VLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNG--RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLA  314 (326)
T ss_dssp             HHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTC--CCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred             HHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhhcCC--CCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHH
Confidence            367899998887643111                1112222222  2233557899999999999999999999998886

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=98.15  E-value=1.6e-07  Score=54.62  Aligned_cols=63  Identities=10%  Similarity=0.149  Sum_probs=40.7

Q ss_pred             CEEeeecCCCCCCCCC-HHHHHHHhhc---CCCC-----CCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHh
Q psy10832          1 MVVEMVDGEPPFFNEP-PLQAMRRIRD---MPPP-----KLKNTHKVSPRLQGFLERLLVRDPLQRATAAELL   64 (90)
Q Consensus         1 il~~~~~g~~p~~~~~-~~~~~~~i~~---~~~~-----~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~   64 (90)
                      ++|+|++|..||.+.. ..........   ....     .+ ....++.++.+++..||..+|.+||++.+++
T Consensus       250 ~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~  321 (364)
T 3op5_A          250 CMIQWLTGHLPWEDNLKDPKYVRDSKIRYRENIASLMDKCF-PAANAPGEIAKYMETVKLLDYTEKPLYENLR  321 (364)
T ss_dssp             HHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHCHHHHHHHHS-CTTCCCHHHHHHHHHHHTCCTTCCCCHHHHH
T ss_pred             HHHHHHhCCCCccccccCHHHHHHHHHHhhhhHHHHHHHhc-ccccCHHHHHHHHHHHhcCCCCCCCCHHHHH
Confidence            3689999999998632 1111111100   0000     01 0145689999999999999999999988765

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=98.14  E-value=6.9e-07  Score=50.37  Aligned_cols=28  Identities=18%  Similarity=0.268  Sum_probs=24.7

Q ss_pred             CCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832         38 VSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus        38 ~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      .+.++.+++..||..||.+||++.++++
T Consensus       268 ~~~~l~~li~~cl~~dP~~Rps~~~i~~  295 (301)
T 3q4u_A          268 TLTSLAKLMKECWYQNPSARLTALRIKK  295 (301)
T ss_dssp             HHHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred             cHHHHHHHHHHHhhcChhhCCCHHHHHH
Confidence            3467999999999999999999998864

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=98.13  E-value=3.3e-07  Score=52.39  Aligned_cols=26  Identities=12%  Similarity=0.109  Sum_probs=23.1

Q ss_pred             HHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832         40 PRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus        40 ~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      ..+.+++..||..||.+||++.++++
T Consensus       265 ~~l~~li~~cl~~dP~~RPt~~ei~~  290 (303)
T 3hmm_A          265 RVMAKIMRECWYANGAARLTALRIKK  290 (303)
T ss_dssp             HHHHHHHHTTCCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHHcccCHhHCcCHHHHHH
Confidence            46789999999999999999998864

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=98.12  E-value=4.5e-07  Score=51.87  Aligned_cols=29  Identities=14%  Similarity=0.233  Sum_probs=25.4

Q ss_pred             CCHHHHHHHHHhhccCCCCCCCHHHHhcC
Q psy10832         38 VSPRLQGFLERLLVRDPLQRATAAELLQH   66 (90)
Q Consensus        38 ~~~~~~~~i~~~l~~~p~~R~~~~~l~~~   66 (90)
                      .+.++.+++..||..||.+||++.+++++
T Consensus       297 ~~~~l~~li~~~l~~dP~~Rps~~ell~~  325 (337)
T 3mdy_A          297 CLRQMGKLMTECWAHNPASRLTALRVKKT  325 (337)
T ss_dssp             HHHHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHHHhhhhChhhCCCHHHHHHH
Confidence            45678999999999999999999988754

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=98.11  E-value=1e-06  Score=50.29  Aligned_cols=29  Identities=14%  Similarity=0.126  Sum_probs=26.0

Q ss_pred             HHHHHHHHHhhccCCCCCCCHHHHhcCcc
Q psy10832         40 PRLQGFLERLLVRDPLQRATAAELLQHPF   68 (90)
Q Consensus        40 ~~~~~~i~~~l~~~p~~R~~~~~l~~~~~   68 (90)
                      ..+.+++..||..||.+||++.++++|-.
T Consensus       279 ~~l~~li~~cl~~dP~~Rps~~ell~~L~  307 (326)
T 3uim_A          279 EQLIQVALLCTQSSPMERPKMSEVVRMLE  307 (326)
T ss_dssp             HHHHHHHHHHTCSCGGGSCCHHHHHHHHH
T ss_pred             HHHHHHHHHHhCcCCccCCCHHHHHHHhc
Confidence            67899999999999999999999987654

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=98.10  E-value=6.7e-08  Score=54.75  Aligned_cols=65  Identities=12%  Similarity=0.136  Sum_probs=40.8

Q ss_pred             CEEeeecCCCCCCCCCHH----HHHHHhhcCCC--------CCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          1 MVVEMVDGEPPFFNEPPL----QAMRRIRDMPP--------PKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~----~~~~~i~~~~~--------~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      ++|+|++|..||.+....    .....+.....        .....+...+..+.+++..||..+|.+||++.++++
T Consensus       223 il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~  299 (307)
T 2nru_A          223 VLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQ  299 (307)
T ss_dssp             HHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSCCHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             HHHHHHHCCCCcccCcchHHHHHHHHHhhhhhhhhhhhccccccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence            368999999999864321    11122211110        001111223467899999999999999999998864

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=98.07  E-value=5.3e-07  Score=53.05  Aligned_cols=64  Identities=16%  Similarity=0.129  Sum_probs=41.6

Q ss_pred             CEEeeecCCCCCCCC----CHHHHHHHhhcCCCCC------------------CCCCC----CCCHHHHHHHHHhhccCC
Q psy10832          1 MVVEMVDGEPPFFNE----PPLQAMRRIRDMPPPK------------------LKNTH----KVSPRLQGFLERLLVRDP   54 (90)
Q Consensus         1 il~~~~~g~~p~~~~----~~~~~~~~i~~~~~~~------------------~~~~~----~~~~~~~~~i~~~l~~~p   54 (90)
                      ++|+|++|..||...    ........+..+.++.                  .+...    .++..+.+++.+||..||
T Consensus       212 il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP  291 (396)
T 4eut_A          212 TFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQ  291 (396)
T ss_dssp             HHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCT
T ss_pred             HHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccCh
Confidence            368999999999742    2334444444433211                  11111    234567899999999999


Q ss_pred             CCCCCHHHHh
Q psy10832         55 LQRATAAELL   64 (90)
Q Consensus        55 ~~R~~~~~l~   64 (90)
                      .+|+++.+++
T Consensus       292 ~~R~s~~e~l  301 (396)
T 4eut_A          292 EKCWGFDQFF  301 (396)
T ss_dssp             TTSCCHHHHH
T ss_pred             hhhccHHHHH
Confidence            9999988763

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=98.03  E-value=1.5e-06  Score=49.74  Aligned_cols=26  Identities=23%  Similarity=0.125  Sum_probs=23.5

Q ss_pred             CHHHHHHHHHhhccCCCCCCCHHHHh
Q psy10832         39 SPRLQGFLERLLVRDPLQRATAAELL   64 (90)
Q Consensus        39 ~~~~~~~i~~~l~~~p~~R~~~~~l~   64 (90)
                      +.++.++|..||..||.+||++.+++
T Consensus       285 ~~~l~~li~~cl~~dP~~Rps~~e~l  310 (336)
T 3g2f_A          285 VRSLKETIEDCWDQDAEARLTAQXAE  310 (336)
T ss_dssp             HHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred             HHHHHHHHHHHhcCChhhCcchHHHH
Confidence            35799999999999999999999884

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=98.03  E-value=7.9e-08  Score=54.89  Aligned_cols=67  Identities=7%  Similarity=0.075  Sum_probs=41.0

Q ss_pred             CEEeeecCCCCCCCCCHH------HHH-HHhhcCCCCCC---C----CCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcC
Q psy10832          1 MVVEMVDGEPPFFNEPPL------QAM-RRIRDMPPPKL---K----NTHKVSPRLQGFLERLLVRDPLQRATAAELLQH   66 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~------~~~-~~i~~~~~~~~---~----~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~   66 (90)
                      ++|+|++|..||.+....      ... ...........   .    .....+..+.+++.+||..||.+||++.+++.+
T Consensus       230 il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  309 (321)
T 2qkw_B          230 VLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWK  309 (321)
T ss_dssp             HHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            368999999999764321      111 11111111010   0    111234568899999999999999999998754


Q ss_pred             c
Q psy10832         67 P   67 (90)
Q Consensus        67 ~   67 (90)
                      -
T Consensus       310 L  310 (321)
T 2qkw_B          310 L  310 (321)
T ss_dssp             H
T ss_pred             H
Confidence            3

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=97.99  E-value=1.6e-06  Score=49.73  Aligned_cols=66  Identities=11%  Similarity=0.193  Sum_probs=41.7

Q ss_pred             CEEeeecC----------CCCCCCC-----CHHHHHHHhhcCCC-CCCCC---CCCCCHHHHHHHHHhhccCCCCCCCHH
Q psy10832          1 MVVEMVDG----------EPPFFNE-----PPLQAMRRIRDMPP-PKLKN---THKVSPRLQGFLERLLVRDPLQRATAA   61 (90)
Q Consensus         1 il~~~~~g----------~~p~~~~-----~~~~~~~~i~~~~~-~~~~~---~~~~~~~~~~~i~~~l~~~p~~R~~~~   61 (90)
                      ++|+|++|          ..||...     ........+..... +....   .......+.+++..||..||.+||++.
T Consensus       246 il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~  325 (342)
T 1b6c_B          246 VFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTAL  325 (342)
T ss_dssp             HHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHH
T ss_pred             HHHHHHhccCcCCcccccccCccccCcCcccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHH
Confidence            36789998          7888764     23333333333211 11110   012235788999999999999999999


Q ss_pred             HHhcC
Q psy10832         62 ELLQH   66 (90)
Q Consensus        62 ~l~~~   66 (90)
                      +++.+
T Consensus       326 ~i~~~  330 (342)
T 1b6c_B          326 RIKKT  330 (342)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            98754

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=97.97  E-value=2.4e-08  Score=56.73  Aligned_cols=59  Identities=17%  Similarity=0.135  Sum_probs=38.7

Q ss_pred             EEeeecCCCCCCCCCHHH-----HHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          2 VVEMVDGEPPFFNEPPLQ-----AMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         2 l~~~~~g~~p~~~~~~~~-----~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      +|+|++|..|+.......     ........     ..+..+++.+.+++..||..||.+||++.+++.
T Consensus       212 l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~  275 (310)
T 3s95_A          212 LCEIIGRVNADPDYLPRTMDFGLNVRGFLDR-----YCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEH  275 (310)
T ss_dssp             HHHHHHTCCSSTTTSCBCTTSSBCHHHHHHH-----TCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHhcCCCCCcchhhhHHHHhhhhhccccc-----cCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            578888888876531110     00000000     113456788999999999999999999988864

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=97.84  E-value=5.3e-07  Score=51.80  Aligned_cols=29  Identities=28%  Similarity=0.568  Sum_probs=25.9

Q ss_pred             CCCHHHHHHHHHhhccCCCCCCCHHHHh-cCcccc
Q psy10832         37 KVSPRLQGFLERLLVRDPLQRATAAELL-QHPFLR   70 (90)
Q Consensus        37 ~~~~~~~~~i~~~l~~~p~~R~~~~~l~-~~~~~~   70 (90)
                      .+++++++||.+||..|     ++.+++ +||||+
T Consensus       307 ~~s~~~~dli~~~L~~d-----sa~e~l~~Hp~f~  336 (336)
T 2vuw_A          307 QIKRKIQEFHRTMLNFS-----SATDLLCQHSLFK  336 (336)
T ss_dssp             HHHHHHHHHHHHGGGSS-----SHHHHHHHCGGGC
T ss_pred             hcCHHHHHHHHHHhccC-----CHHHHHhcCCCcC
Confidence            46788999999999877     899999 999985

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=97.03  E-value=1.2e-05  Score=50.36  Aligned_cols=33  Identities=27%  Similarity=0.277  Sum_probs=27.0

Q ss_pred             CCHHHHHHHHHhhccCCCCCCCHHHHhcCcccc
Q psy10832         38 VSPRLQGFLERLLVRDPLQRATAAELLQHPFLR   70 (90)
Q Consensus        38 ~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~   70 (90)
                      .++.+.++|.+||..||.+|++..+.+.|+|+.
T Consensus       293 ~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~  325 (681)
T 2pzi_A          293 TYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTG  325 (681)
T ss_dssp             HCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred             cCHHHHHHHhhhccCChhhCCCHHHHHHHHHHH
Confidence            357899999999999999999877666666653

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=94.93  E-value=0.00098  Score=38.72  Aligned_cols=56  Identities=11%  Similarity=-0.030  Sum_probs=34.3

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCC-HHHH
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRAT-AAEL   63 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~-~~~l   63 (90)
                      ++|+|++|..||........  .+ ..   ... ....++...+++..||..+|.+|+. +.++
T Consensus       274 il~elltg~~pf~~~~~~~~--~~-~~---~~~-~~~~~~~~~~~~~~~l~~~p~~r~~~~~~l  330 (365)
T 3e7e_A          274 TVYCMLFGTYMKVKNEGGEC--KP-EG---LFR-RLPHLDMWNEFFHVMLNIPDCHHLPSLDLL  330 (365)
T ss_dssp             HHHHHHHSSCCCEEEETTEE--EE-CS---CCT-TCSSHHHHHHHHHHHHCCCCTTCCCCHHHH
T ss_pred             HHHHHHhCCCccccCCCCce--ee-ch---hcc-ccCcHHHHHHHHHHHcCCCCCCcchHHHHH
Confidence            36788999988865322100  00 01   111 1124677899999999999999965 4433

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	90
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	8e-23
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	1e-18
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	8e-18
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	6e-17
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	9e-16
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	3e-15
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	5e-15
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	1e-14
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	2e-14
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	2e-14
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	2e-14
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	3e-14
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	4e-14
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	1e-13
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	7e-13
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	8e-13
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	1e-12
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	9e-12
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	1e-11
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	2e-11
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	2e-11
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	2e-11
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	3e-11
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	4e-11
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	5e-11
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	8e-11
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	1e-10
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	3e-10
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	8e-10
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	8e-10
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	1e-09
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	1e-09
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	2e-09
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	2e-09
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	3e-09
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	3e-09
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	7e-09
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	1e-08
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	1e-08
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	1e-08
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	3e-08
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	3e-08
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	4e-08
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	8e-08
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	1e-07
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	1e-07
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	2e-07
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	3e-07
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	4e-07
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	4e-07
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	5e-07
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	5e-07
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	6e-07
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	6e-07
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	8e-07
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	1e-06
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	2e-06
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	2e-06
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	5e-06
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	2e-05
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	0.003

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.6 bits (214), Expect = 8e-23
 Identities = 37/86 (43%), Positives = 54/86 (62%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
           M +EM++GEPP+ NE PL+A+  I     P+L+N  K+S   + FL R L  D  +R +A
Sbjct: 205 MAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSA 264

Query: 61  AELLQHPFLRQAGPPALLVPLMKGSR 86
            ELLQH FL+ A P + L PL+  ++
Sbjct: 265 KELLQHQFLKIAKPLSSLTPLIAAAK 290

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 75.4 bits (185), Expect = 1e-18
 Identities = 23/83 (27%), Positives = 44/83 (53%), Gaps = 1/83 (1%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
             +E+ + +PP FN   + A+  I     P L++ H  S   + F++  L + P  R T+
Sbjct: 203 TCIELAERKPPLFNMNAMSALYHIAQNESPALQSGH-WSEYFRNFVDSCLQKIPQDRPTS 261

Query: 61  AELLQHPFLRQAGPPALLVPLMK 83
             LL+H F+ +  PP +++ L++
Sbjct: 262 EVLLKHRFVLRERPPTVIMDLIQ 284

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.1 bits (179), Expect = 8e-18
 Identities = 22/77 (28%), Positives = 39/77 (50%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
            ++EM + EPP     P++ + +I    PP L    + S   + FL++ L ++   R T 
Sbjct: 204 TLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTT 263

Query: 61  AELLQHPFLRQAGPPAL 77
           ++LLQHPF+       +
Sbjct: 264 SQLLQHPFVTVDSNKPI 280

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.2 bits (174), Expect = 6e-17
 Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 3/92 (3%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHK-VSPRLQGFLERLLVRDPLQRAT 59
           +V  ++ G  PF  E   Q +  I +      +   K +S     F++RLLV++   R T
Sbjct: 192 LVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMT 251

Query: 60  AAELLQHPFLRQAGPPAL--LVPLMKGSRHSN 89
           A+E LQHP+L+Q        ++  +K  R+ +
Sbjct: 252 ASEALQHPWLKQKIERVSTKVIRTLKHRRYYH 283

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 67.4 bits (164), Expect = 9e-16
 Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 1/72 (1%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRI-RDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRAT 59
           ++  ++ G PPF++   +  +R I               S  ++  + R LV  P +R T
Sbjct: 204 IMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYT 263

Query: 60  AAELLQHPFLRQ 71
           A E L HPF +Q
Sbjct: 264 AEEALAHPFFQQ 275

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 66.2 bits (161), Expect = 3e-15
 Identities = 17/72 (23%), Positives = 34/72 (47%), Gaps = 1/72 (1%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRI-RDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRAT 59
           +   ++ G PPF++E   +   +I +            +S   + F+  L+ +DP +R T
Sbjct: 198 IAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFT 257

Query: 60  AAELLQHPFLRQ 71
             + LQHP++  
Sbjct: 258 CEQALQHPWIAG 269

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.4 bits (159), Expect = 5e-15
 Identities = 14/69 (20%), Positives = 31/69 (44%), Gaps = 2/69 (2%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
           ++ E+    PPF      +   +IR+    ++   ++ S  L   + R+L      R + 
Sbjct: 203 LLYELCALMPPFTAFSQKELAGKIREGKFRRIP--YRYSDELNEIITRMLNLKDYHRPSV 260

Query: 61  AELLQHPFL 69
            E+L++P +
Sbjct: 261 EEILENPLI 269

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 64.7 bits (157), Expect = 1e-14
 Identities = 18/82 (21%), Positives = 34/82 (41%), Gaps = 1/82 (1%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDM-PPPKLKNTHKVSPRLQGFLERLLVRDPLQRAT 59
           +   ++ G  PF  E   + +R ++             +S   + F+ +LL+ DP  R T
Sbjct: 214 LSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMT 273

Query: 60  AAELLQHPFLRQAGPPALLVPL 81
             + L+HP+L     P     +
Sbjct: 274 IHQALEHPWLTPGNAPGRDSQI 295

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.8 bits (155), Expect = 2e-14
 Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 3/70 (4%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
           +  E + G+PPF      +  +RI  +          V+   +  + RLL  +P QR   
Sbjct: 193 LCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF---VTEGARDLISRLLKHNPSQRPML 249

Query: 61  AELLQHPFLR 70
            E+L+HP++ 
Sbjct: 250 REVLEHPWIT 259

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.6 bits (154), Expect = 2e-14
 Identities = 18/79 (22%), Positives = 36/79 (45%), Gaps = 1/79 (1%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDM-PPPKLKNTHKVSPRLQGFLERLLVRDPLQRAT 59
           +   ++ G  PF  +   + +  +  +    + +     S   + F+ RLLV+DP +R T
Sbjct: 205 ITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMT 264

Query: 60  AAELLQHPFLRQAGPPALL 78
             + LQHP+++       L
Sbjct: 265 IQDSLQHPWIKPKDTQQAL 283

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 63.9 bits (155), Expect = 2e-14
 Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 1/72 (1%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDM-PPPKLKNTHKVSPRLQGFLERLLVRDPLQRAT 59
           +   ++ G  PF  E  L+ ++ ++             VSP  + F++ LL ++P +R T
Sbjct: 217 LGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLT 276

Query: 60  AAELLQHPFLRQ 71
             + L+HP+L+ 
Sbjct: 277 VHDALEHPWLKG 288

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.5 bits (154), Expect = 3e-14
 Identities = 16/85 (18%), Positives = 30/85 (35%), Gaps = 8/85 (9%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
           ++  M+ GE P+                   L    K+       L ++LV +P  R T 
Sbjct: 195 VLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITI 254

Query: 61  AELLQHPFLRQAGPPALLVPLMKGS 85
            ++ +  +  +        PL KG+
Sbjct: 255 PDIKKDRWYNK--------PLKKGA 271

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.1 bits (153), Expect = 4e-14
 Identities = 12/70 (17%), Positives = 26/70 (37%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
            ++EM   E P+        + R                P ++  +E  + ++  +R + 
Sbjct: 201 CMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSI 260

Query: 61  AELLQHPFLR 70
            +LL H F +
Sbjct: 261 KDLLNHAFFQ 270

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.0 bits (150), Expect = 1e-13
 Identities = 17/80 (21%), Positives = 34/80 (42%), Gaps = 5/80 (6%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDM-----PPPKLKNTHKVSPRLQGFLERLLVRDPL 55
           ++  ++ G PPF++   L     ++                +VS  ++  +  LL  +P 
Sbjct: 202 IMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPT 261

Query: 56  QRATAAELLQHPFLRQAGPP 75
           QR T  E + HP++ Q+   
Sbjct: 262 QRMTITEFMNHPWIMQSTKV 281

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 59.7 bits (144), Expect = 7e-13
 Identities = 15/76 (19%), Positives = 33/76 (43%), Gaps = 8/76 (10%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQR--- 57
           ++ EM+ G  PF++   ++   +I +            +  ++  L RL+ RD  QR   
Sbjct: 190 LIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPF---FNEDVKDLLSRLITRDLSQRLGN 246

Query: 58  --ATAAELLQHPFLRQ 71
                 ++  HP+ ++
Sbjct: 247 LQNGTEDVKNHPWFKE 262

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.8 bits (144), Expect = 8e-13
 Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 8/76 (10%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQR--- 57
           ++ EM+ G  PF+N+   +    I        +    +SP  +  L  LL +DP QR   
Sbjct: 194 VMYEMMCGRLPFYNQDHERLFELILMEEIRFPRT---LSPEAKSLLAGLLKKDPKQRLGG 250

Query: 58  --ATAAELLQHPFLRQ 71
             + A E+++H F   
Sbjct: 251 GPSDAKEVMEHRFFLS 266

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.4 bits (143), Expect = 1e-12
 Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 4/72 (5%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
           ++ EM+ G+ PF  +   +    IR   P   +    +    +  L +L VR+P +R   
Sbjct: 192 LLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRW---LEKEAKDLLVKLFVREPEKRLGV 248

Query: 61  A-ELLQHPFLRQ 71
             ++ QHP  R+
Sbjct: 249 RGDIRQHPLFRE 260

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.6 bits (136), Expect = 9e-12
 Identities = 24/91 (26%), Positives = 37/91 (40%), Gaps = 17/91 (18%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
           ++ ++V G PPF         ++I  +     +   K  P+ +  +E+LLV D  +R   
Sbjct: 199 IIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPE---KFFPKARDLVEKLLVLDATKRLGC 255

Query: 61  AE------LLQHPF--------LRQAGPPAL 77
            E      L  HPF        L Q  PP L
Sbjct: 256 EEMEGYGPLKAHPFFESVTWENLHQQTPPKL 286

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 56.3 bits (135), Expect = 1e-11
 Identities = 20/75 (26%), Positives = 30/75 (40%), Gaps = 5/75 (6%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRAT- 59
           M+ +++ G  PF            R      ++     SP L+  LE LL RD  +R   
Sbjct: 195 MLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGC 254

Query: 60  ----AAELLQHPFLR 70
               A E+ + PF R
Sbjct: 255 LGRGAQEVKESPFFR 269

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 55.7 bits (133), Expect = 2e-11
 Identities = 20/97 (20%), Positives = 32/97 (32%), Gaps = 26/97 (26%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDM--------------------------PPPKLKN 34
           +  EMV+G P F        + RI  +                          P P    
Sbjct: 190 IFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESF 249

Query: 35  THKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQ 71
              +       L ++L  DP QR TA + L+H + ++
Sbjct: 250 LKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 55.5 bits (133), Expect = 2e-11
 Identities = 17/71 (23%), Positives = 33/71 (46%), Gaps = 1/71 (1%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRI-RDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRAT 59
           ++ E++ GEPPF  + P+    +  R+ P P       +S  L   + + L ++P  R  
Sbjct: 203 VLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQ 262

Query: 60  AAELLQHPFLR 70
            A  ++   +R
Sbjct: 263 TAAEMRADLVR 273

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.7 bits (133), Expect = 2e-11
 Identities = 16/94 (17%), Positives = 30/94 (31%), Gaps = 24/94 (25%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDM------------------------PPPKLKNTH 36
           +  EM   +P F     +  + +I D+                          P  K   
Sbjct: 204 IFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVT 263

Query: 37  KVSPRLQGFLERLLVRDPLQRATAAELLQHPFLR 70
            +    +  L + L  +P +R +A   L HP+ +
Sbjct: 264 DIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 297

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.4 bits (133), Expect = 3e-11
 Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 1/65 (1%)

Query: 8   GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHP 67
           G          + +  I + PPPKL +    S   Q F+ + L+++P +RA   +L+ H 
Sbjct: 241 GMDSRPPMAIFELLDYIVNEPPPKLPS-GVFSLEFQDFVNKCLIKNPAERADLKQLMVHA 299

Query: 68  FLRQA 72
           F++++
Sbjct: 300 FIKRS 304

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.8 bits (131), Expect = 4e-11
 Identities = 17/77 (22%), Positives = 37/77 (48%), Gaps = 6/77 (7%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRI-RDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQR-- 57
           ++ E++ G  PF  +    +   I R +   +     ++S   +  ++RLL++DP +R  
Sbjct: 221 LMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKRLG 280

Query: 58  ---ATAAELLQHPFLRQ 71
                A E+ +H F ++
Sbjct: 281 CGPRDADEIKEHLFFQK 297

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 54.8 bits (131), Expect = 5e-11
 Identities = 18/75 (24%), Positives = 29/75 (38%), Gaps = 8/75 (10%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQR--- 57
           ++ EM  G PPFF + P+Q   +I         +    S  L+  L  LL  D  +R   
Sbjct: 227 LIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH---FSSDLKDLLRNLLQVDLTKRFGN 283

Query: 58  --ATAAELLQHPFLR 70
                 ++  H +  
Sbjct: 284 LKNGVNDIKNHKWFA 298

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.0 bits (129), Expect = 8e-11
 Identities = 18/106 (16%), Positives = 31/106 (29%), Gaps = 26/106 (24%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDM--------------------------PPPKLKN 34
           ++ E++ G+P F  +  +  +  I  +                           P     
Sbjct: 212 VLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVF 271

Query: 35  THKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPPALLVP 80
             +  P       RLL   P  R T  E   H F  +   P + +P
Sbjct: 272 RPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVKLP 317

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.2 bits (127), Expect = 1e-10
 Identities = 17/75 (22%), Positives = 31/75 (41%), Gaps = 9/75 (12%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
           ++ +MV G+ PF ++  +  +R              +VS   Q  +   L   P  R T 
Sbjct: 199 LLYDMVCGDIPFEHDEEI--IRGQVFFRQ-------RVSSECQHLIRWCLALRPSDRPTF 249

Query: 61  AELLQHPFLRQAGPP 75
            E+  HP+++    P
Sbjct: 250 EEIQNHPWMQDVLLP 264

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.6 bits (125), Expect = 3e-10
 Identities = 14/101 (13%), Positives = 28/101 (27%), Gaps = 25/101 (24%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDM-------------------------PPPKLKNT 35
           ++ E++   P    +  L  + RI +                            P     
Sbjct: 190 ILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIF 249

Query: 36  HKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPPA 76
                 L   ++ L + +P  R TA + L+  +      P 
Sbjct: 250 SAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPT 290

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.4 bits (122), Expect = 8e-10
 Identities = 16/105 (15%), Positives = 27/105 (25%), Gaps = 29/105 (27%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDM-----------------------------PPPK 31
           ++ EM    P          +  I  +                                 
Sbjct: 211 IMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKD 270

Query: 32  LKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPPA 76
               +   P     +++LLV DP QR  + + L H F      P+
Sbjct: 271 RLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDPMPS 315

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.1 bits (121), Expect = 8e-10
 Identities = 17/67 (25%), Positives = 29/67 (43%)

Query: 9   EPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPF 68
           + P   + P      +       +    K++   +  L+ LL  +P+QR +A E LQHP+
Sbjct: 226 QWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPY 285

Query: 69  LRQAGPP 75
                PP
Sbjct: 286 FSDFCPP 292

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.0 bits (121), Expect = 1e-09
 Identities = 18/101 (17%), Positives = 30/101 (29%), Gaps = 26/101 (25%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRI--------------------------RDMPPPKLKN 34
           +  EMV     F  +  +  + RI                          +       K 
Sbjct: 192 IFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKV 251

Query: 35  THKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPP 75
              +    +  L ++L  DP +R +A   L HPF +    P
Sbjct: 252 VPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 292

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.0 bits (121), Expect = 1e-09
 Identities = 17/103 (16%), Positives = 32/103 (31%), Gaps = 28/103 (27%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDM----------------------------PPPKL 32
           ++ EM+   P F  +  L  +  I  +                              P  
Sbjct: 202 ILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWN 261

Query: 33  KNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPP 75
           +       +    L+++L  +P +R    + L HP+L Q   P
Sbjct: 262 RLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDP 304

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 50.6 bits (120), Expect = 2e-09
 Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 1/61 (1%)

Query: 10  PPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFL 69
            P FN+   +  R+  +      +N H VSP    FL++LL  D   R TA E ++HP+ 
Sbjct: 264 DPRFNDILGRHSRKRWERFVHS-ENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 322

Query: 70  R 70
            
Sbjct: 323 Y 323

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 50.0 bits (118), Expect = 2e-09
 Identities = 15/62 (24%), Positives = 25/62 (40%)

Query: 9   EPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPF 68
                          + D+   K K +   +  +  FL  +L  DP +RA A  L+ HP+
Sbjct: 271 SRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPW 330

Query: 69  LR 70
           L+
Sbjct: 331 LK 332

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.9 bits (118), Expect = 3e-09
 Identities = 17/115 (14%), Positives = 36/115 (31%), Gaps = 39/115 (33%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRI------------------------------------ 24
           ++ EMV  +  F     +    ++                                    
Sbjct: 207 IMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPK 266

Query: 25  ---RDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPPA 76
                + P   ++    + + +  L ++LV DP +R +  + LQHP++     PA
Sbjct: 267 LFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPA 321

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.5 bits (117), Expect = 3e-09
 Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 1/67 (1%)

Query: 10  PPFFNEPPLQAMRRIRDMPPPKLKNT-HKVSPRLQGFLERLLVRDPLQRATAAELLQHPF 68
               +E     ++ +  MP     N     +P     LE++LV D  +R TAA+ L H +
Sbjct: 244 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 303

Query: 69  LRQAGPP 75
             Q   P
Sbjct: 304 FAQYHDP 310

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.6 bits (115), Expect = 7e-09
 Identities = 12/62 (19%), Positives = 20/62 (32%), Gaps = 2/62 (3%)

Query: 5   MVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELL 64
           ++ G  PF        + RI +     +       P L   + +    DP +R    EL 
Sbjct: 203 LMHGVKPFQGVKNNDVIGRIENGERLPMPP--NCPPTLYSLMTKCWAYDPSRRPRFTELK 260

Query: 65  QH 66
             
Sbjct: 261 AQ 262

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.1 bits (114), Expect = 1e-08
 Identities = 9/67 (13%), Positives = 22/67 (32%), Gaps = 3/67 (4%)

Query: 1   MVVEMV-DGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRAT 59
           ++ E+   G  P+   P    + R+         +     P +   ++     D   R +
Sbjct: 189 LLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPD--GCPPAVYEVMKNCWHLDAAMRPS 246

Query: 60  AAELLQH 66
             +L + 
Sbjct: 247 FLQLREQ 253

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.9 bits (113), Expect = 1e-08
 Identities = 22/95 (23%), Positives = 31/95 (32%), Gaps = 28/95 (29%)

Query: 5   MVDGEPPFFNEPPLQAMRRIRD---MPPPKLKNTHK------------------------ 37
           M+ G+  F     L  ++ I      PP +     +                        
Sbjct: 212 MITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILT 271

Query: 38  -VSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQ 71
             SP     LE++LV D  QR TA E L HP+   
Sbjct: 272 NASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFES 306

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.7 bits (113), Expect = 1e-08
 Identities = 9/69 (13%), Positives = 25/69 (36%), Gaps = 3/69 (4%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRD---MPPPKLKNTHKVSPRLQGFLERLLVRDPLQR 57
           ++ E++ G+ P+ N      +  +     + P   K        ++  +   L +   +R
Sbjct: 198 VLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDER 257

Query: 58  ATAAELLQH 66
               ++L  
Sbjct: 258 PLFPQILAS 266

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.1 bits (111), Expect = 3e-08
 Identities = 15/73 (20%), Positives = 25/73 (34%), Gaps = 4/73 (5%)

Query: 1   MVVEMV-DGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRAT 59
            + EM   G+ P+      Q + +I D    +L         +   + +     P  R T
Sbjct: 203 TLWEMFTYGQEPWIGLNGSQILHKI-DKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPT 261

Query: 60  AAELLQHPFLRQA 72
              L    FL +A
Sbjct: 262 FVALRD--FLLEA 272

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.7 bits (110), Expect = 3e-08
 Identities = 8/67 (11%), Positives = 21/67 (31%), Gaps = 2/67 (2%)

Query: 1   MVVEMV-DGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRAT 59
           ++ E+   G  P+   P      ++      K+      +  +   ++     D  +R +
Sbjct: 255 LLWEIFSLGVNPYPGIPVDANFYKLIQ-NGFKMDQPFYATEEIYIIMQSCWAFDSRKRPS 313

Query: 60  AAELLQH 66
              L   
Sbjct: 314 FPNLTSF 320

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.3 bits (109), Expect = 4e-08
 Identities = 7/72 (9%), Positives = 19/72 (26%), Gaps = 6/72 (8%)

Query: 1   MVVEMV-DGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRAT 59
           ++ E    G+ P+      +    +                 +   +      D   R  
Sbjct: 199 LMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPA--GCPREMYDLMNLCWTYDVENRPG 256

Query: 60  AAEL---LQHPF 68
            A +   L++ +
Sbjct: 257 FAAVELRLRNYY 268

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.5 bits (107), Expect = 8e-08
 Identities = 8/74 (10%), Positives = 20/74 (27%), Gaps = 5/74 (6%)

Query: 5   MVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAEL- 63
           +  G+ P+      + M  I      +     +  P L   +    +     R     + 
Sbjct: 206 LSYGQKPYKKMKGPEVMAFIEQGKRMECPP--ECPPELYALMSDCWIYKWEDRPDFLTVE 263

Query: 64  --LQHPFLRQAGPP 75
             ++  +   A   
Sbjct: 264 QRMRACYYSLASKV 277

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.1 bits (106), Expect = 1e-07
 Identities = 10/67 (14%), Positives = 21/67 (31%), Gaps = 3/67 (4%)

Query: 1   MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRAT 59
           ++ E+   G+ P+      +    I           H  S ++   +         +R T
Sbjct: 190 LMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRP--HLASEKVYTIMYSCWHEKADERPT 247

Query: 60  AAELLQH 66
              LL +
Sbjct: 248 FKILLSN 254

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.2 bits (106), Expect = 1e-07
 Identities = 11/78 (14%), Positives = 25/78 (32%), Gaps = 9/78 (11%)

Query: 1   MVVEMV-DGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRAT 59
           ++ E+    E P+      Q +R + +       +       L   +      +P  R +
Sbjct: 224 VLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPD--NCPDMLFELMRMCWQYNPKMRPS 281

Query: 60  AAELLQ------HPFLRQ 71
             E++        P  R+
Sbjct: 282 FLEIISSIKEEMEPGFRE 299

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 44.4 bits (104), Expect = 2e-07
 Identities = 9/79 (11%), Positives = 22/79 (27%), Gaps = 8/79 (10%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRI-----RDMPPPKLKNTHKVSPRLQGFLERLLVRDPL 55
           +++    G  P+         ++      + M  P              +L         
Sbjct: 202 VLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFD 261

Query: 56  QRATAA---ELLQHPFLRQ 71
            +   +   +L ++ F RQ
Sbjct: 262 DKPDYSYLRQLFRNLFHRQ 280

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.0 bits (103), Expect = 3e-07
 Identities = 6/59 (10%), Positives = 18/59 (30%), Gaps = 2/59 (3%)

Query: 8   GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQH 66
           G  P+      +   ++      +          +   + +     P +R + A++L  
Sbjct: 223 GGTPYCGMTCAELYEKLPQGYRLEKPL--NCDDEVYDLMRQCWREKPYERPSFAQILVS 279

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.7 bits (102), Expect = 4e-07
 Identities = 9/59 (15%), Positives = 21/59 (35%), Gaps = 2/59 (3%)

Query: 8   GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQH 66
           G  P+   P  +  + +++       +    +  L   +       P QR T  +L++ 
Sbjct: 234 GGSPYPGVPVEELFKLLKEGHRMDKPS--NCTNELYMMMRDCWHAVPSQRPTFKQLVED 290

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.5 bits (102), Expect = 4e-07
 Identities = 12/70 (17%), Positives = 26/70 (37%), Gaps = 9/70 (12%)

Query: 1   MVVEMV-DGEPPFFNEPPLQAMRRIR---DMPPPKLKNTHKVSPRLQGFLERLLVRDPLQ 56
           ++ E+  +G+ P+ N    + +  I     +  P+L      S  +   +       P  
Sbjct: 191 LMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRL-----ASTHVYQIMNHCWKERPED 245

Query: 57  RATAAELLQH 66
           R   + LL+ 
Sbjct: 246 RPAFSRLLRQ 255

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 43.3 bits (101), Expect = 5e-07
 Identities = 8/66 (12%), Positives = 21/66 (31%), Gaps = 3/66 (4%)

Query: 1   MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRAT 59
           ++ E+   G  P++     + +  +RD               L   +     + P  R +
Sbjct: 231 VLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPE--NCPLELYNLMRLCWSKLPADRPS 288

Query: 60  AAELLQ 65
              + +
Sbjct: 289 FCSIHR 294

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.5 bits (102), Expect = 5e-07
 Identities = 9/78 (11%), Positives = 24/78 (30%), Gaps = 5/78 (6%)

Query: 1   MVVEMV-DGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRAT 59
           ++ E+   G  P+      + + ++            +    L   + +   ++P +R T
Sbjct: 203 LLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP--ECPESLHDLMCQCWRKEPEERPT 260

Query: 60  AAELLQ--HPFLRQAGPP 75
              L      +     P 
Sbjct: 261 FEYLQAFLEDYFTSTEPQ 278

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.2 bits (101), Expect = 6e-07
 Identities = 9/67 (13%), Positives = 20/67 (29%), Gaps = 3/67 (4%)

Query: 1   MVVEMV-DGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRAT 59
            V E++  G  P+   P  +    +              +  +   + +  + D   R  
Sbjct: 202 TVWELMTFGSKPYDGIPASEISSILEKGERLPQPP--ICTIDVYMIMVKCWMIDADSRPK 259

Query: 60  AAELLQH 66
             EL+  
Sbjct: 260 FRELIIE 266

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.9 bits (100), Expect = 6e-07
 Identities = 10/66 (15%), Positives = 25/66 (37%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
           ++ E+       +    +      R     +++     +P +   +      +P QR T 
Sbjct: 225 LLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTF 284

Query: 61  AELLQH 66
           +EL++H
Sbjct: 285 SELVEH 290

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.8 bits (100), Expect = 8e-07
 Identities = 8/67 (11%), Positives = 20/67 (29%), Gaps = 3/67 (4%)

Query: 1   MVVEMV-DGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRAT 59
           ++ E++  G PP+ +         +                 L   + +        R +
Sbjct: 223 LLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPE--YCPDPLYEVMLKCWHPKAEMRPS 280

Query: 60  AAELLQH 66
            +EL+  
Sbjct: 281 FSELVSR 287

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 42.0 bits (98), Expect = 1e-06
 Identities = 11/70 (15%), Positives = 25/70 (35%), Gaps = 9/70 (12%)

Query: 1   MVVEMV-DGEPPFFNEPPLQAMRRIRD---MPPPKLKNTHKVSPRLQGFLERLLVRDPLQ 56
           ++ E++  GE P+++      +  I     +PPP           L   +     +D   
Sbjct: 222 VMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPM-----DCPSALHQLMLDCWQKDRNH 276

Query: 57  RATAAELLQH 66
           R    +++  
Sbjct: 277 RPKFGQIVNT 286

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.9 bits (98), Expect = 2e-06
 Identities = 10/72 (13%), Positives = 20/72 (27%), Gaps = 5/72 (6%)

Query: 1   MVVEMV-DGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRAT 59
           ++ E+V  G  P+      + ++ +         +       L   +       P  R T
Sbjct: 199 LLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD--NCPEELYQLMRLCWKERPEDRPT 256

Query: 60  AAELLQ--HPFL 69
              L      F 
Sbjct: 257 FDYLRSVLEDFF 268

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 42.0 bits (98), Expect = 2e-06
 Identities = 7/65 (10%), Positives = 23/65 (35%), Gaps = 1/65 (1%)

Query: 1   MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
           ++ E+       +    L  +  + +    +++       ++   +      +P  R + 
Sbjct: 205 LLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERPEGCPEKVYELMRACWQWNPSDRPSF 263

Query: 61  AELLQ 65
           AE+ Q
Sbjct: 264 AEIHQ 268

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.6 bits (94), Expect = 5e-06
 Identities = 12/66 (18%), Positives = 24/66 (36%), Gaps = 2/66 (3%)

Query: 1   MVVEMV-DGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRAT 59
            + E+   G  P+   P      ++       L   H     +   ++     DPL+R T
Sbjct: 236 FLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEH-APAEMYDIMKTCWDADPLKRPT 294

Query: 60  AAELLQ 65
             +++Q
Sbjct: 295 FKQIVQ 300

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.0 bits (90), Expect = 2e-05
 Identities = 9/58 (15%), Positives = 23/58 (39%), Gaps = 2/58 (3%)

Query: 8   GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ 65
           GE P++     + M+ I D    +L         +   + +   ++  +R   A+++ 
Sbjct: 210 GERPYWELSNHEVMKAIND--GFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVS 265

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.9 bits (74), Expect = 0.003
 Identities = 6/81 (7%), Positives = 15/81 (18%), Gaps = 19/81 (23%)

Query: 4   EMVDGEPPFFNEPPLQAM-------------------RRIRDMPPPKLKNTHKVSPRLQG 44
           E+             Q                      +      P    + +    +  
Sbjct: 210 EIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAK 269

Query: 45  FLERLLVRDPLQRATAAELLQ 65
            +      +   R TA  + +
Sbjct: 270 IMRECWYANGAARLTALRIKK 290

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	90
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.76
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.7
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.68
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.64
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.63
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.62
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.62
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.62
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.62
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.61
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.61
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.6
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.6
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.59
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.59
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.59
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.58
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.57
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.56
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.56
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.55
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.52
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.52
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.5
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.47
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.46
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.46
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.45
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.45
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.43
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.42
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.39
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.34
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.33
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.3
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.29
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.26
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.24
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.22
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.21
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.2
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.17
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.17
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.16
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.14
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.14
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.11
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.11
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.09
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.08
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.08
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.06
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.06
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.06
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.02
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	98.92
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	98.91
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	98.88
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	98.85
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	98.51
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	97.86
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	97.85

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=3.8e-19  Score=99.76  Aligned_cols=87  Identities=43%  Similarity=0.713  Sum_probs=72.3

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCCCcccHH
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPPALLVP   80 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~~~~~~~   80 (90)
                      ++|+|++|.+||.+.+.......+.....+....+..+++++++||.+||..||.+|+++.++++||||+.....+.+.+
T Consensus       205 ilyemltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~Hp~~~~~~~~~~l~p  284 (293)
T d1yhwa1         205 MAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKPLSSLTP  284 (293)
T ss_dssp             HHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCCSSGGGSCHHHHHHHHHHTCSSTTTSCCHHHHTTCGGGGGCCCGGGGHH
T ss_pred             HHHHHhhCCCCCCCCCHHHHHHHHHhCCCCCCCCcccCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhCCCCCCCcCCC
Confidence            47899999999999888777777666555555556778999999999999999999999999999999987666666777


Q ss_pred             HHhhhhc
Q psy10832         81 LMKGSRH   87 (90)
Q Consensus        81 ~~~~~~~   87 (90)
                      ++...++
T Consensus       285 ~~~~~~e  291 (293)
T d1yhwa1         285 LIAAAKE  291 (293)
T ss_dssp             HHHHHHH
T ss_pred             CCccccc
Confidence            7766554

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=4.2e-18  Score=95.30  Aligned_cols=83  Identities=28%  Similarity=0.501  Sum_probs=67.0

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCCCcccHH
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPPALLVP   80 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~~~~~~~   80 (90)
                      ++|+|++|.+||.+.+.......+.....+....+..+++++++||.+||..||.+|+++.++++||||+... ...+.+
T Consensus       204 ilyemltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~hp~~~~~~-~~p~~~  282 (288)
T d2jfla1         204 TLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDS-NKPIRE  282 (288)
T ss_dssp             HHHHHHHSSCTTTTSCGGGHHHHHHHSCCCCCSSGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGCCCC-CHHHHH
T ss_pred             HHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCccccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCCC-CCCcHH
Confidence            4689999999999988877888887776656665677899999999999999999999999999999998533 223334


Q ss_pred             HHhh
Q psy10832         81 LMKG   84 (90)
Q Consensus        81 ~~~~   84 (90)
                      .+.+
T Consensus       283 li~e  286 (288)
T d2jfla1         283 LIAE  286 (288)
T ss_dssp             HHHH
T ss_pred             HHhc
Confidence            4443

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=6.1e-18  Score=93.61  Aligned_cols=69  Identities=26%  Similarity=0.494  Sum_probs=60.6

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCcccccc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQA   72 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~   72 (90)
                      ++|+|++|.+||.+.+.......+....   +..+..+++++++|+.+||..||.+|+++.++++||||++.
T Consensus       193 ilyell~G~~Pf~~~~~~~~~~~i~~~~---~~~p~~~s~~~~~li~~~L~~dp~~R~t~~eil~hp~~~~~  261 (263)
T d2j4za1         193 LCYEFLVGKPPFEANTYQETYKRISRVE---FTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITAN  261 (263)
T ss_dssp             HHHHHHHSSCTTCCSSHHHHHHHHHTTC---CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTCHHHHHH
T ss_pred             HHHHHhcCCCCCCCCCHHHHHHHHHcCC---CCCCccCCHHHHHHHHHHccCCHhHCcCHHHHHcCcCcCCc
Confidence            4789999999999999888888887763   34456789999999999999999999999999999999853

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.64  E-value=8.8e-17  Score=90.57  Aligned_cols=73  Identities=23%  Similarity=0.412  Sum_probs=61.7

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCC-CCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPP-PKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      ++|+|++|.+||.+.........+..... ...+.+..+++++++||.+||..||.+|+++.++++||||++..
T Consensus       198 ilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~~  271 (307)
T d1a06a_         198 IAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGDT  271 (307)
T ss_dssp             HHHHHHHSSCSCCCSSHHHHHHHHHTTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTTSSC
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHhccCCCCCCccccCCCHHHHHHHHHHccCCHhHCcCHHHHhcCHhhCCCC
Confidence            47899999999999988888888877643 22334457899999999999999999999999999999998643

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.63  E-value=1.2e-16  Score=90.03  Aligned_cols=81  Identities=27%  Similarity=0.557  Sum_probs=65.7

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCCCcccHH
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPPALLVP   80 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~~~~~~~   80 (90)
                      ++|||++|..||.+.+.......+.....+... +..+++++++||.+||..||.+||++.++++||||..........+
T Consensus       203 ilyel~~g~~Pf~~~~~~~~~~~i~~~~~~~~~-~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~Hp~~~~~~~~~~~~~  281 (309)
T d1u5ra_         203 TCIELAERKPPLFNMNAMSALYHIAQNESPALQ-SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPPTVIMD  281 (309)
T ss_dssp             HHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCS-CTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHSCCCTTHHHH
T ss_pred             HHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCC-CCCCCHHHHHHHHHHCcCChhHCcCHHHHHhCHHhcCCCCchhhHH
Confidence            468999999999998888877777766544333 3568999999999999999999999999999999987665554444


Q ss_pred             HH
Q psy10832         81 LM   82 (90)
Q Consensus        81 ~~   82 (90)
                      .+
T Consensus       282 ~~  283 (309)
T d1u5ra_         282 LI  283 (309)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.62  E-value=8.7e-17  Score=89.50  Aligned_cols=71  Identities=28%  Similarity=0.477  Sum_probs=59.9

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCC-CCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPP-PKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQ   71 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~   71 (90)
                      ++|+|++|..||.+.+.......+..+.. ........+++++++++.+||..||.+|+++.++++||||+.
T Consensus       204 ilyeml~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~h~~~~~  275 (277)
T d1phka_         204 IMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ  275 (277)
T ss_dssp             HHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCT
T ss_pred             hhhhhccCCCCCCCCCHHHHHHHHHhCCCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcCHHHHH
Confidence            47899999999999988888877776643 222233478999999999999999999999999999999975

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=6.2e-17  Score=89.82  Aligned_cols=69  Identities=20%  Similarity=0.322  Sum_probs=54.7

Q ss_pred             CEEeeecCCCCCCCC-CHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCcccc
Q psy10832          1 MVVEMVDGEPPFFNE-PPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLR   70 (90)
Q Consensus         1 il~~~~~g~~p~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~   70 (90)
                      ++|+|++|..||.+. +.......+..+.. ....+...+++++++|.+||..||.+|+++.++++||||+
T Consensus       201 ilyel~~g~~Pf~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~ell~Hp~fk  270 (270)
T d1t4ha_         201 CMLEMATSEYPYSECQNAAQIYRRVTSGVK-PASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQ  270 (270)
T ss_dssp             HHHHHHHSSCTTTTCSSHHHHHHHHTTTCC-CGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC
T ss_pred             HHHHHHHCCCCCCCcccHHHHHHHHHcCCC-CcccCccCCHHHHHHHHHHccCCHhHCcCHHHHhCCcccC
Confidence            478999999999875 44455555555432 2333456789999999999999999999999999999995

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=6.6e-17  Score=90.42  Aligned_cols=73  Identities=26%  Similarity=0.450  Sum_probs=62.2

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHH------HhcCccccccCC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAE------LLQHPFLRQAGP   74 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~------l~~~~~~~~~~~   74 (90)
                      ++|+|++|..||.+.+......++....   +..+..+++++++||.+||..||.+|+++++      +++||||++..+
T Consensus       199 ilyell~g~~Pf~~~~~~~~~~~i~~~~---~~~p~~~s~~~~~li~~~L~~dP~~R~t~~e~~~~~~i~~Hpff~~i~w  275 (288)
T d1uu3a_         199 IIYQLVAGLPPFRAGNEYLIFQKIIKLE---YDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTW  275 (288)
T ss_dssp             HHHHHHHSSCSSCCSSHHHHHHHHHTTC---CCCCTTCCHHHHHHHHTTSCSSGGGSTTSGGGTCHHHHHTSGGGTTCCC
T ss_pred             HHHHHhhCCCCCCCcCHHHHHHHHHcCC---CCCCccCCHHHHHHHHHHccCCHhHCcCHHHHcCCHHHHcCCccCCCCH
Confidence            4789999999999999888888888773   4445678999999999999999999999776      688999998765


Q ss_pred             Cc
Q psy10832         75 PA   76 (90)
Q Consensus        75 ~~   76 (90)
                      ..
T Consensus       276 ~~  277 (288)
T d1uu3a_         276 EN  277 (288)
T ss_dssp             TT
T ss_pred             HH
Confidence            43

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=3.2e-17  Score=91.75  Aligned_cols=79  Identities=23%  Similarity=0.449  Sum_probs=60.2

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCC-CCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCCCcccH
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPP-KLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPPALLV   79 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~~~~~~   79 (90)
                      ++|+|++|..||.+.+.......+...... ....+..+++++++||.+||..||.+|++++++++||||+.......+.
T Consensus       205 ilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~~~~~~l~  284 (293)
T d1jksa_         205 ITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALS  284 (293)
T ss_dssp             HHHHHHHSSCSSCCSSHHHHHHHHHTTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTCC--------
T ss_pred             HHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCchhcCCCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCCChhHhhc
Confidence            478999999999999988888888776432 1222356899999999999999999999999999999998765544443

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.61  E-value=1.8e-16  Score=90.69  Aligned_cols=72  Identities=25%  Similarity=0.486  Sum_probs=61.3

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCC-CCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCcccccc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPP-KLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQA   72 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~   72 (90)
                      ++|+|++|.+||.+.+.......+...... ....+..+++++++||.+||..||.+|+++.++++||||++.
T Consensus       217 ilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~Hp~~~~~  289 (352)
T d1koba_         217 LGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGD  289 (352)
T ss_dssp             HHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTTTSSC
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhCCC
Confidence            478999999999999988888888776432 223345789999999999999999999999999999999864

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.61  E-value=1.5e-16  Score=91.03  Aligned_cols=73  Identities=23%  Similarity=0.379  Sum_probs=61.0

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCC-CCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPP-KLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      ++|+|++|..||.+.+.......+...... ....+..+++++++||.+||..||.+|+++.++++||||+...
T Consensus       214 ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~hp~~~~~~  287 (350)
T d1koaa2         214 LSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGN  287 (350)
T ss_dssp             HHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCCGGGGGCCHHHHHHHHHHCCSSGGGSCCHHHHHHSTTTSCTT
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCCC
Confidence            478999999999999888888888766432 2222346899999999999999999999999999999998754

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=1.6e-16  Score=88.17  Aligned_cols=72  Identities=17%  Similarity=0.244  Sum_probs=53.5

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCcccccc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQA   72 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~   72 (90)
                      ++|+|++|.+||.+....................+..+++++++++.+||..||.+|++++++++||||+..
T Consensus       195 ilyeml~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~  266 (271)
T d1nvra_         195 VLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKP  266 (271)
T ss_dssp             HHHHHHHSSCSCSSSSTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCC
T ss_pred             HHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCcC
Confidence            478999999999875433222222222222233345689999999999999999999999999999999853

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=3.3e-16  Score=86.79  Aligned_cols=67  Identities=21%  Similarity=0.352  Sum_probs=58.5

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFL   69 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~   69 (90)
                      ++|||++|..||.+.+.......+..+..+  ..+..+++++.+++.+||..||.+||++.++++|||+
T Consensus       203 ilyel~tg~~Pf~~~~~~~~~~~i~~~~~~--~~~~~~s~~l~~li~~~L~~dp~~Rps~~ell~hp~i  269 (269)
T d2java1         203 LLYELCALMPPFTAFSQKELAGKIREGKFR--RIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLI  269 (269)
T ss_dssp             HHHHHHHSSCSCCCSSHHHHHHHHHHTCCC--CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred             HHHHHhhCCCCCCCCCHHHHHHHHHcCCCC--CCCcccCHHHHHHHHHHcCCChhHCcCHHHHHhCCcC
Confidence            478999999999999888888888776543  2346789999999999999999999999999999995

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=5.4e-16  Score=88.29  Aligned_cols=69  Identities=29%  Similarity=0.485  Sum_probs=60.6

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCC-----HHHHhcCcccccc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRAT-----AAELLQHPFLRQA   72 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~-----~~~l~~~~~~~~~   72 (90)
                      ++|||++|.+||.+.+.......+...   .+..|..+++++++||.+||..||.+|++     +.++++||||.+.
T Consensus       194 ilyeml~G~~pf~~~~~~~~~~~i~~~---~~~~p~~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~Hp~f~~i  267 (337)
T d1o6la_         194 VMYEMMCGRLPFYNQDHERLFELILME---EIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSI  267 (337)
T ss_dssp             HHHHHHHSSCSSCCSSHHHHHHHHHHC---CCCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred             HHHHHHHCCCCCCCcCHHHHHHHHhcC---CCCCCccCCHHHHHHHHhhccCCchhhcccccccHHHHHcCcccccC
Confidence            478999999999999988888888777   34456789999999999999999999995     8999999999864

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.59  E-value=4e-16  Score=89.21  Aligned_cols=70  Identities=26%  Similarity=0.484  Sum_probs=60.9

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCC-----CHHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRA-----TAAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~-----~~~~l~~~~~~~~~~   73 (90)
                      ++|+|++|.+||.+.+.......+....   ...+..+++++.++|.+||..||.+|+     +++++++||||.+..
T Consensus       227 ilyemltG~~Pf~~~~~~~~~~~i~~~~---~~~p~~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~Hp~f~~~~  301 (350)
T d1rdqe_         227 LIYEMAAGYPPFFADQPIQIYEKIVSGK---VRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTD  301 (350)
T ss_dssp             HHHHHHHSSCSSCCSSHHHHHHHHHHCC---CCCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTTCC
T ss_pred             HHHHHHhCCCCCCCcCHHHHHHHHhcCC---CCCCccCCHHHHHHHHHHhhhCHHhccccccccHHHHHcCccccCCC
Confidence            4789999999999999888888888773   344567899999999999999999995     799999999998754

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.59  E-value=4.4e-16  Score=88.00  Aligned_cols=70  Identities=23%  Similarity=0.500  Sum_probs=61.1

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCC-----CHHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRA-----TAAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~-----~~~~l~~~~~~~~~~   73 (90)
                      ++|+|++|..||.+.+.......+..+.   ...+..+++++++++.+||..||.+|+     +++++++||||++..
T Consensus       190 ilyemltG~~Pf~~~~~~~~~~~i~~~~---~~~p~~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~Hp~f~~i~  264 (316)
T d1fota_         190 LIYEMLAGYTPFYDSNTMKTYEKILNAE---LRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVV  264 (316)
T ss_dssp             HHHHHHHSSCTTCCSSHHHHHHHHHHCC---CCCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSSCC
T ss_pred             hHHHHHhCCCCCCCcCHHHHHHHHHcCC---CCCCCCCCHHHHHHHHHHhhhCHHhccccchhhHHHHHcCcccccCC
Confidence            4789999999999999988888888773   344567899999999999999999996     899999999998754

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.58  E-value=1.1e-15  Score=85.67  Aligned_cols=73  Identities=23%  Similarity=0.397  Sum_probs=56.6

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcC--CC----------------------CCCCCCCCCCHHHHHHHHHhhccCCCC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDM--PP----------------------PKLKNTHKVSPRLQGFLERLLVRDPLQ   56 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~--~~----------------------~~~~~~~~~~~~~~~~i~~~l~~~p~~   56 (90)
                      ++|||++|.+||.+.+....+..+...  .+                      +....+..+++.+++||.+||..||.+
T Consensus       204 il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~  283 (305)
T d1blxa_         204 IFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAK  283 (305)
T ss_dssp             HHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTT
T ss_pred             HHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhcccccccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhH
Confidence            478999999999998877766655321  00                      001123457899999999999999999


Q ss_pred             CCCHHHHhcCccccccC
Q psy10832         57 RATAAELLQHPFLRQAG   73 (90)
Q Consensus        57 R~~~~~l~~~~~~~~~~   73 (90)
                      |+++.++++||||++..
T Consensus       284 R~sa~e~L~Hpff~~i~  300 (305)
T d1blxa_         284 RISAYSALSHPYFQDLE  300 (305)
T ss_dssp             SCCHHHHHTSGGGTTCC
T ss_pred             CcCHHHHhcChhhcCch
Confidence            99999999999998753

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=1.8e-16  Score=89.71  Aligned_cols=69  Identities=25%  Similarity=0.428  Sum_probs=60.1

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHH-HHhcCcccccc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAA-ELLQHPFLRQA   72 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~-~l~~~~~~~~~   72 (90)
                      ++|+|++|..||.+.+.......+....   +..+..+++++++||.+||..||.+|+++. ++++||||++.
T Consensus       192 ilyemltG~~PF~~~~~~~~~~~i~~~~---~~~p~~~s~~~~dli~~~L~~dP~~R~s~~~~l~~hpff~~~  261 (320)
T d1xjda_         192 LLYEMLIGQSPFHGQDEEELFHSIRMDN---PFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREI  261 (320)
T ss_dssp             HHHHHHHSSCSSCCSSHHHHHHHHHHCC---CCCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGSGGGTTC
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHcCC---CCCCccCCHHHHHHHHHhcccCCCCCcCHHHHHHhCchhccC
Confidence            4689999999999999988888887763   344567899999999999999999999985 89999999864

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=1.2e-16  Score=90.40  Aligned_cols=71  Identities=32%  Similarity=0.514  Sum_probs=59.9

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCC-CCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPP-KLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQ   71 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~   71 (90)
                      ++|+|++|..||.+.+.......+...... ....+..+++++++||.+||..||.+|+++.++++||||+.
T Consensus       192 ily~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~hp~~~~  263 (321)
T d1tkia_         192 LVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQ  263 (321)
T ss_dssp             HHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHS
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCChhhccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhcc
Confidence            478999999999999998888888776431 11223468999999999999999999999999999999975

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.56  E-value=4.6e-16  Score=89.35  Aligned_cols=70  Identities=30%  Similarity=0.471  Sum_probs=54.1

Q ss_pred             CEEeeecCCCCCCCCCHH---HHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCC-----HHHHhcCcccccc
Q psy10832          1 MVVEMVDGEPPFFNEPPL---QAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRAT-----AAELLQHPFLRQA   72 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~-----~~~l~~~~~~~~~   72 (90)
                      ++|+|++|..||.+.+..   .....+...   ....+..+++++++||.+||..||.+|++     ++++++||||++.
T Consensus       195 ilyemltG~~Pf~~~~~~~~~~~~~~~~~~---~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~Hp~f~~i  271 (364)
T d1omwa3         195 MLFKLLRGHSPFRQHKTKDKHEIDRMTLTM---AVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSL  271 (364)
T ss_dssp             HHHHHHHSSCSSCSSCSSCHHHHHHHSSSC---CCCCCSSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHTSGGGTTC
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHhcccC---CCCCCCCCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHcCccccCC
Confidence            478999999999875432   222232222   34445678999999999999999999998     7999999999875


Q ss_pred             C
Q psy10832         73 G   73 (90)
Q Consensus        73 ~   73 (90)
                      .
T Consensus       272 ~  272 (364)
T d1omwa3         272 D  272 (364)
T ss_dssp             C
T ss_pred             C
Confidence            4

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.55  E-value=3.4e-15  Score=83.11  Aligned_cols=71  Identities=28%  Similarity=0.413  Sum_probs=53.9

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhc--CCC------------------------CCCCCCCCCCHHHHHHHHHhhccCC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRD--MPP------------------------PKLKNTHKVSPRLQGFLERLLVRDP   54 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~--~~~------------------------~~~~~~~~~~~~~~~~i~~~l~~~p   54 (90)
                      ++|||++|++||.+.+..+...++..  +.+                        +.......+++++++|+.+||..||
T Consensus       190 ~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP  269 (286)
T d1ob3a_         190 IFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDP  269 (286)
T ss_dssp             HHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSST
T ss_pred             HHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhhcccccccccCcchhhhcccCCHHHHHHHHHHccCCh
Confidence            36899999999998877766555431  000                        0011124578899999999999999


Q ss_pred             CCCCCHHHHhcCccccc
Q psy10832         55 LQRATAAELLQHPFLRQ   71 (90)
Q Consensus        55 ~~R~~~~~l~~~~~~~~   71 (90)
                      ++|++++++++||||+.
T Consensus       270 ~~R~s~~ell~Hp~f~~  286 (286)
T d1ob3a_         270 NQRITAKQALEHAYFKE  286 (286)
T ss_dssp             TTSCCHHHHHTSGGGGC
T ss_pred             hHCcCHHHHhcCcccCc
Confidence            99999999999999973

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=1.9e-15  Score=84.62  Aligned_cols=74  Identities=18%  Similarity=0.290  Sum_probs=56.6

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcC--CCCCC-----------------------CCCCCCCHHHHHHHHHhhccCCC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDM--PPPKL-----------------------KNTHKVSPRLQGFLERLLVRDPL   55 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~--~~~~~-----------------------~~~~~~~~~~~~~i~~~l~~~p~   55 (90)
                      ++|+|++|.+||.+.+..+.+..+...  .+...                       ......++++++|+.+||..||.
T Consensus       190 il~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~  269 (299)
T d1ua2a_         190 ILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPC  269 (299)
T ss_dssp             HHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTT
T ss_pred             HHHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccchhccchhhhhccCCCCChHHhcccCCHHHHHHHHHHccCChh
Confidence            468999999999998887776665421  00000                       00125688999999999999999


Q ss_pred             CCCCHHHHhcCccccccCC
Q psy10832         56 QRATAAELLQHPFLRQAGP   74 (90)
Q Consensus        56 ~R~~~~~l~~~~~~~~~~~   74 (90)
                      +|+++.++++||||++...
T Consensus       270 ~R~sa~e~L~Hp~f~~~p~  288 (299)
T d1ua2a_         270 ARITATQALKMKYFSNRPG  288 (299)
T ss_dssp             TSCCHHHHHTSGGGTSSSC
T ss_pred             hCcCHHHHhCCHhhCCCCC
Confidence            9999999999999997553

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=2.2e-15  Score=83.54  Aligned_cols=64  Identities=25%  Similarity=0.394  Sum_probs=52.0

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      ++|+|++|..||.+.+      .+...   ....+..+++++++||.+||..||.+|++++++++||||++..
T Consensus       199 ilyell~g~~Pf~~~~------~i~~~---~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~hp~~~~~~  262 (273)
T d1xwsa_         199 LLYDMVCGDIPFEHDE------EIIRG---QVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVL  262 (273)
T ss_dssp             HHHHHHHSSCSCCSHH------HHHHC---CCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSCC
T ss_pred             eehhHhhCCCCCCCch------HHhhc---ccCCCCCCCHHHHHHHHHHccCCHhHCcCHHHHhcCHhhCCCC
Confidence            4689999999998642      23333   2333457899999999999999999999999999999998654

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=1.9e-14  Score=80.54  Aligned_cols=75  Identities=24%  Similarity=0.412  Sum_probs=56.2

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcC--CCCC---------------CC---------CCCCCCHHHHHHHHHhhccCC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDM--PPPK---------------LK---------NTHKVSPRLQGFLERLLVRDP   54 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~--~~~~---------------~~---------~~~~~~~~~~~~i~~~l~~~p   54 (90)
                      ++|+|++|..||.+.+....+..+...  .+..               ..         ....++.++++|+.+||..||
T Consensus       192 ily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP  271 (298)
T d1gz8a_         192 IFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDP  271 (298)
T ss_dssp             HHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSST
T ss_pred             hhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhccccccccccccccccccccchhhhccCCCHHHHHHHHHHccCCh
Confidence            368999999999998877666554321  0000               00         012567899999999999999


Q ss_pred             CCCCCHHHHhcCccccccCCC
Q psy10832         55 LQRATAAELLQHPFLRQAGPP   75 (90)
Q Consensus        55 ~~R~~~~~l~~~~~~~~~~~~   75 (90)
                      .+|+++.++++||||+....+
T Consensus       272 ~~R~t~~ell~H~ff~~~~~p  292 (298)
T d1gz8a_         272 NKRISAKAALAHPFFQDVTKP  292 (298)
T ss_dssp             TTSCCHHHHHTSGGGTTCCCC
T ss_pred             hHCcCHHHHhCCHhhccCCCC
Confidence            999999999999999876543

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=2.3e-14  Score=81.50  Aligned_cols=73  Identities=29%  Similarity=0.431  Sum_probs=54.6

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcC---------------------------CC-CCCCCCCCCCHHHHHHHHHhhcc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDM---------------------------PP-PKLKNTHKVSPRLQGFLERLLVR   52 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~---------------------------~~-~~~~~~~~~~~~~~~~i~~~l~~   52 (90)
                      ++|+|++|.+||.+.+.......+...                           .. .........++++.+||.+||..
T Consensus       208 il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~  287 (346)
T d1cm8a_         208 IMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVL  287 (346)
T ss_dssp             HHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCS
T ss_pred             HHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhhcchhhhhhhccCCcccccchHHhccCCCHHHHHHHHHHCcC
Confidence            368999999999988766554433210                           00 00112245789999999999999


Q ss_pred             CCCCCCCHHHHhcCccccccC
Q psy10832         53 DPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus        53 ~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      ||.+|+++.++++||||+...
T Consensus       288 dP~~R~ta~eiL~Hp~f~~~~  308 (346)
T d1cm8a_         288 DAEQRVTAGEALAHPYFESLH  308 (346)
T ss_dssp             STTTSCCHHHHHHSGGGTTTC
T ss_pred             ChhHCcCHHHHhcChhhCcCC
Confidence            999999999999999998754

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.46  E-value=2.7e-14  Score=81.43  Aligned_cols=74  Identities=22%  Similarity=0.357  Sum_probs=55.7

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcC-------------------CCCCC-------CCCCCCCHHHHHHHHHhhccCC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDM-------------------PPPKL-------KNTHKVSPRLQGFLERLLVRDP   54 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~-------------------~~~~~-------~~~~~~~~~~~~~i~~~l~~~p   54 (90)
                      ++|||++|.+||.+.+.......+...                   ..+..       ......++++.+|+.+||..||
T Consensus       212 il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP  291 (350)
T d1q5ka_         212 VLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTP  291 (350)
T ss_dssp             HHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSG
T ss_pred             EEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhhccchhhccccccccCchhhhcccCCCHHHHHHHHHHccCCh
Confidence            468999999999988776665554310                   00000       1123568999999999999999


Q ss_pred             CCCCCHHHHhcCccccccCC
Q psy10832         55 LQRATAAELLQHPFLRQAGP   74 (90)
Q Consensus        55 ~~R~~~~~l~~~~~~~~~~~   74 (90)
                      .+|+++.++++||||+....
T Consensus       292 ~~R~ta~e~L~Hp~f~~~~~  311 (350)
T d1q5ka_         292 TARLTPLEACAHSFFDELRD  311 (350)
T ss_dssp             GGSCCHHHHHTSGGGGGGGC
T ss_pred             hHCcCHHHHhcCHhhccccC
Confidence            99999999999999987643

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.46  E-value=2e-15  Score=85.43  Aligned_cols=70  Identities=26%  Similarity=0.476  Sum_probs=53.2

Q ss_pred             CEEeeecCCCCCCCCCHH----HHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCC-----HHHHhcCccccc
Q psy10832          1 MVVEMVDGEPPFFNEPPL----QAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRAT-----AAELLQHPFLRQ   71 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~----~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~-----~~~l~~~~~~~~   71 (90)
                      ++|+|++|..||.+.+..    .........   ....+...++++.+|+.+||..||.+|++     ++++++||||+.
T Consensus       221 iLyelltG~~PF~~~~~~~~~~~i~~~~~~~---~~~~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~Hpff~~  297 (322)
T d1vzoa_         221 LMYELLTGASPFTVDGEKNSQAEISRRILKS---EPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQK  297 (322)
T ss_dssp             HHHHHHHSSCTTSCTTSCCCHHHHHHHHHHC---CCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTT
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHHhcccC---CCCCcccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHcCHhhcC
Confidence            478999999999875433    222222233   33345678999999999999999999994     899999999986


Q ss_pred             cC
Q psy10832         72 AG   73 (90)
Q Consensus        72 ~~   73 (90)
                      ..
T Consensus       298 i~  299 (322)
T d1vzoa_         298 IN  299 (322)
T ss_dssp             CC
T ss_pred             CC
Confidence            44

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=5.3e-14  Score=79.17  Aligned_cols=73  Identities=21%  Similarity=0.259  Sum_probs=52.7

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhc--CCCCCCCCC---------------------------CCCCHHHHHHHHHhhc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRD--MPPPKLKNT---------------------------HKVSPRLQGFLERLLV   51 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~--~~~~~~~~~---------------------------~~~~~~~~~~i~~~l~   51 (90)
                      ++|+|++|.+||.+.+.......+..  +..+.....                           ...++++++||.+||.
T Consensus       211 il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~  290 (318)
T d3blha1         211 IMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLV  290 (318)
T ss_dssp             HHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSC
T ss_pred             eeeeHhhCCCCCCCCCHHHHHHHHHHhcCCCChhhccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCc
Confidence            46899999999998877666554432  111000000                           0136778999999999


Q ss_pred             cCCCCCCCHHHHhcCccccccC
Q psy10832         52 RDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus        52 ~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      .||++|++++++++||||+...
T Consensus       291 ~dP~~R~sa~elL~Hpff~~~p  312 (318)
T d3blha1         291 LDPAQRIDSDDALNHDFFWSDP  312 (318)
T ss_dssp             SSTTTSCCHHHHHHSGGGSSSS
T ss_pred             CChhHCcCHHHHHcChhhccCC
Confidence            9999999999999999998643

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=1.2e-14  Score=82.60  Aligned_cols=73  Identities=25%  Similarity=0.392  Sum_probs=55.3

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCC-C---------------------CC------CCCCCCCHHHHHHHHHhhcc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPP-P---------------------KL------KNTHKVSPRLQGFLERLLVR   52 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~-~---------------------~~------~~~~~~~~~~~~~i~~~l~~   52 (90)
                      ++|+|++|.+||.+.+.......+..... +                     ..      ......++++++||.+||..
T Consensus       208 ~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~  287 (348)
T d2gfsa1         208 IMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVL  287 (348)
T ss_dssp             HHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCCHHHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCS
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhccchhhhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcC
Confidence            36899999999999877666555432100 0                     00      01135789999999999999


Q ss_pred             CCCCCCCHHHHhcCccccccC
Q psy10832         53 DPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus        53 ~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      ||.+|+++.++++||||+...
T Consensus       288 dP~~R~ta~elL~Hp~f~~~~  308 (348)
T d2gfsa1         288 DSDKRITAAQALAHAYFAQYH  308 (348)
T ss_dssp             SGGGSCCHHHHHTSGGGTTTC
T ss_pred             ChhhCcCHHHHhcCHhhCCCC
Confidence            999999999999999999754

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.43  E-value=1.1e-13  Score=76.91  Aligned_cols=73  Identities=26%  Similarity=0.450  Sum_probs=52.0

Q ss_pred             CEEeeecCCCCCC-CCCHHHHHHHhhc--CCC------------------------CCCCCCCCCCHHHHHHHHHhhccC
Q psy10832          1 MVVEMVDGEPPFF-NEPPLQAMRRIRD--MPP------------------------PKLKNTHKVSPRLQGFLERLLVRD   53 (90)
Q Consensus         1 il~~~~~g~~p~~-~~~~~~~~~~i~~--~~~------------------------~~~~~~~~~~~~~~~~i~~~l~~~   53 (90)
                      ++|+|++|..||. +.+.......+..  +.+                        ........+++.+.+|+.+||..|
T Consensus       191 il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~d  270 (292)
T d1unla_         191 IFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCN  270 (292)
T ss_dssp             HHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSS
T ss_pred             HHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhcccccccccccccchhhhccccCCHHHHHHHHHHccCC
Confidence            3689999998854 4555555544331  100                        001122356889999999999999


Q ss_pred             CCCCCCHHHHhcCccccccC
Q psy10832         54 PLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus        54 p~~R~~~~~l~~~~~~~~~~   73 (90)
                      |.+|++++++++||||+...
T Consensus       271 P~~R~sa~e~L~Hp~f~~~~  290 (292)
T d1unla_         271 PVQRISAEEALQHPYFSDFC  290 (292)
T ss_dssp             GGGSCCHHHHTTSGGGSSCS
T ss_pred             hhHCcCHHHHhcChhhcCCC
Confidence            99999999999999998654

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.42  E-value=5.3e-14  Score=79.52  Aligned_cols=37  Identities=27%  Similarity=0.618  Sum_probs=34.1

Q ss_pred             CCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832         37 KVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus        37 ~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      .++.++++|+.+||..||.+|++++++++||||+...
T Consensus       269 ~~s~~~~dli~~~L~~dP~~R~ta~e~L~Hpf~~~~~  305 (322)
T d1s9ja_         269 VFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSD  305 (322)
T ss_dssp             TBCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHHH
T ss_pred             cCCHHHHHHHHHHcCCChhHCcCHHHHhhCHhhCcCC
Confidence            4689999999999999999999999999999998654

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.39  E-value=2e-14  Score=81.66  Aligned_cols=72  Identities=25%  Similarity=0.441  Sum_probs=50.5

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHh----hcCCCCCCC--CCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRI----RDMPPPKLK--NTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i----~~~~~~~~~--~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      ++|+|++|.+||.+.+.......+    ..... .++  .+..+++++++||.+||..||.+|+++.+++.||||....
T Consensus       202 ily~lltg~~Pf~~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~~  279 (335)
T d2ozaa1         202 IMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY-EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST  279 (335)
T ss_dssp             HHHHHTTSSCSCEETTCC--------CCCSCSS-SCCTTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHHSHHHHTTT
T ss_pred             hHHHHhhCCCCCCCCCHHHHHHHHHHHHhcCCC-CCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcCHHhhCCC
Confidence            478999999999876543332222    22211 111  1135789999999999999999999999999999997543

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.34  E-value=2.6e-13  Score=77.23  Aligned_cols=73  Identities=23%  Similarity=0.422  Sum_probs=53.2

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhc------------------------CCC----CCCCCCCCCCHHHHHHHHHhhcc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRD------------------------MPP----PKLKNTHKVSPRLQGFLERLLVR   52 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~------------------------~~~----~~~~~~~~~~~~~~~~i~~~l~~   52 (90)
                      ++|+|++|.+||.+.+..........                        ...    +.......+++++++|+.+||..
T Consensus       202 il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~  281 (345)
T d1pmea_         202 ILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTF  281 (345)
T ss_dssp             HHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCS
T ss_pred             eehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhhhhhhhhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccC
Confidence            36899999999998766544433221                        000    00011235788999999999999


Q ss_pred             CCCCCCCHHHHhcCccccccC
Q psy10832         53 DPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus        53 ~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      ||.+|+++.++++||||+...
T Consensus       282 dP~~R~ta~e~L~hpf~~~~~  302 (345)
T d1pmea_         282 NPHKRIEVEQALAHPYLEQYY  302 (345)
T ss_dssp             STTTSCCHHHHHTSGGGTTTC
T ss_pred             ChhHCcCHHHHhcCHhhccCC
Confidence            999999999999999999654

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.33  E-value=8.3e-14  Score=79.54  Aligned_cols=35  Identities=29%  Similarity=0.561  Sum_probs=32.1

Q ss_pred             CHHHHHHHHHhhccCCCCCCCHHHHhcCccccccC
Q psy10832         39 SPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAG   73 (90)
Q Consensus        39 ~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~   73 (90)
                      ++++.+||.+||..||++|++++++++||||+...
T Consensus       284 s~~~~dll~~mL~~dP~~R~ta~elL~Hpw~~~~~  318 (355)
T d2b1pa1         284 ASQARDLLSKMLVIDPAKRISVDDALQHPYINVWY  318 (355)
T ss_dssp             HHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGGGC
T ss_pred             CHHHHHHHHHHCcCChhHCcCHHHHhcCcccCCCC
Confidence            56789999999999999999999999999998644

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.30  E-value=8.1e-13  Score=73.30  Aligned_cols=68  Identities=9%  Similarity=0.106  Sum_probs=54.6

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHh---cCcccc
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELL---QHPFLR   70 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~---~~~~~~   70 (90)
                      ++|||++ |.+||.+.+.......+..+..  ...+..+++++.+++..||..||.+||++.++.   +|.|+.
T Consensus       199 ~l~ellt~g~~Pf~~~~~~~~~~~i~~~~~--~~~p~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~  270 (277)
T d1xbba_         199 LMWEAFSYGQKPYRGMKGSEVTAMLEKGER--MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYD  270 (277)
T ss_dssp             HHHHHHTTTCCSSTTCCHHHHHHHHHTTCC--CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred             hhhHHhhCCCCCCCCCCHHHHHHHHHcCCC--CCCCcccCHHHHHHHHHHcCCCHhHCcCHHHHHHHhhCHHhh
Confidence            3689987 8999999888887777776643  334567899999999999999999999998874   455543

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.29  E-value=5.3e-13  Score=75.34  Aligned_cols=38  Identities=37%  Similarity=0.539  Sum_probs=34.8

Q ss_pred             CCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCC
Q psy10832         37 KVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGP   74 (90)
Q Consensus        37 ~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~   74 (90)
                      .+++++++||.+||..||.+|++++++++||||++..+
T Consensus       290 ~~s~~~~dli~~mL~~dP~~R~ta~e~L~Hp~F~~v~~  327 (328)
T d3bqca1         290 LVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVK  327 (328)
T ss_dssp             GCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTSCC
T ss_pred             cCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCCCC
Confidence            46889999999999999999999999999999997643

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.26  E-value=1.6e-12  Score=71.47  Aligned_cols=64  Identities=17%  Similarity=0.169  Sum_probs=54.2

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcC
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQH   66 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~   66 (90)
                      ++|||++ |..||.+.+.......+..+..  ...|...++++.+|+.+||..||++||+++++++|
T Consensus       190 ~l~el~t~g~~Pf~~~~~~~~~~~i~~~~~--~~~p~~~~~~l~~li~~cl~~dP~~RPt~~eil~~  254 (258)
T d1k2pa_         190 LMWEIYSLGKMPYERFTNSETAEHIAQGLR--LYRPHLASEKVYTIMYSCWHEKADERPTFKILLSN  254 (258)
T ss_dssp             HHHHHHTTSCCTTTTSCHHHHHHHHHTTCC--CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             hhHhHHhcCCCCCCCCCHHHHHHHHHhCCC--CCCcccccHHHHHHHHHHccCCHhHCcCHHHHHHH
Confidence            3689987 8999999998888888877643  33456789999999999999999999999999876

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=1.3e-12  Score=72.73  Aligned_cols=68  Identities=12%  Similarity=0.158  Sum_probs=55.1

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHH---hcCcccc
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAEL---LQHPFLR   70 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l---~~~~~~~   70 (90)
                      ++|||++ |..||.+.+.......+..+..+  ..+..+++++.+++..||..||.+||++.++   ++|.|+.
T Consensus       201 ~l~E~lt~G~~Pf~~~~~~~~~~~i~~~~~~--~~p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~~~~  272 (285)
T d1u59a_         201 TMWEALSYGQKPYKKMKGPEVMAFIEQGKRM--ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS  272 (285)
T ss_dssp             HHHHHHTTSCCTTTTCCTHHHHHHHHTTCCC--CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC--CCCCcCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHH
Confidence            3688887 99999998877777777776533  3456789999999999999999999998776   5677764

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.22  E-value=1.7e-12  Score=73.38  Aligned_cols=65  Identities=12%  Similarity=0.168  Sum_probs=49.8

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcC
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQH   66 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~   66 (90)
                      ++|||++ |.+||.+.+....+..+..... ....+..+++++++||..||..||.+||++++|++|
T Consensus       255 il~emlt~g~~Pf~~~~~~~~~~~~~~~~~-~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~  320 (325)
T d1rjba_         255 LLWEIFSLGVNPYPGIPVDANFYKLIQNGF-KMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSF  320 (325)
T ss_dssp             HHHHHTTTSCCSSTTCCCSHHHHHHHHTTC-CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHhCCCCCCCCCCHHHHHHHHHhcCC-CCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            4689997 8999998655444444444322 334456789999999999999999999999999865

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.21  E-value=2.2e-12  Score=71.33  Aligned_cols=64  Identities=22%  Similarity=0.305  Sum_probs=53.2

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcC
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQH   66 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~   66 (90)
                      ++|||++ |.+||.+.+.......+..+..  .+.+..+++++.++|.+||..||.+||++.+++.+
T Consensus       198 il~e~lt~g~~P~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~  262 (273)
T d1mp8a_         198 CMWEILMHGVKPFQGVKNNDVIGRIENGER--LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQ  262 (273)
T ss_dssp             HHHHHHTTSCCTTTTCCGGGHHHHHHTTCC--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHhcCCCCCCCCCHHHHHHHHHcCCC--CCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence            3688887 8999999888878777777643  33456789999999999999999999999998754

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.20  E-value=8.4e-12  Score=69.05  Aligned_cols=63  Identities=17%  Similarity=0.270  Sum_probs=52.6

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHh
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELL   64 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~   64 (90)
                      ++|||++ |..||.+.+.......+..... .++.+..++.++++++..||..||.+||++.++.
T Consensus       203 il~emlt~G~~Pf~~~~~~~~~~~i~~~~~-~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~  266 (273)
T d1u46a_         203 TLWEMFTYGQEPWIGLNGSQILHKIDKEGE-RLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALR  266 (273)
T ss_dssp             HHHHHHTTSCCTTTTCCHHHHHHHHHTSCC-CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             HHHHHHhCCCCCCCCcCHHHHHHHHHhCCC-CCCCcccccHHHHHHHHHHcCCChhHCcCHHHHH
Confidence            3689997 8999999999888888766543 2344567899999999999999999999999885

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.17  E-value=5.3e-12  Score=69.80  Aligned_cols=68  Identities=15%  Similarity=0.228  Sum_probs=54.3

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc--Ccccc
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ--HPFLR   70 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~--~~~~~   70 (90)
                      ++|||++ |.+|+...+.......+..+..  ...+..+++++.+++.+||..||.+||+++++++  ++||.
T Consensus       199 vl~ellt~~~~~~~~~~~~~~~~~i~~~~~--~~~p~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~~ft  269 (272)
T d1qpca_         199 LLTEIVTHGRIPYPGMTNPEVIQNLERGYR--MVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT  269 (272)
T ss_dssp             HHHHHHTTTCCSSTTCCHHHHHHHHHTTCC--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHhCCCCCCCCCCHHHHHHHHHhcCC--CCCcccChHHHHHHHHHHcCCCHhHCcCHHHHHHHhhhhhh
Confidence            4689998 5666777778777777776543  3335678999999999999999999999999976  77775

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.17  E-value=2.2e-12  Score=71.41  Aligned_cols=69  Identities=28%  Similarity=0.509  Sum_probs=52.6

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHhhcCCC-CCCCCCCCCCHHHHHHHHHhhccCCCCCC-CHHHHhcCcccc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPP-PKLKNTHKVSPRLQGFLERLLVRDPLQRA-TAAELLQHPFLR   70 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~p~~R~-~~~~l~~~~~~~   70 (90)
                      ++|+|++|.+||.+.+.......+..... +....+..+++++.++|.+||..||.+|+ +++++ .|+|.+
T Consensus       203 ilyelltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l-~~~l~r  273 (277)
T d1o6ya_         203 VLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEM-RADLVR  273 (277)
T ss_dssp             HHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCGGGTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHH-HHHHHH
T ss_pred             HHHHHHhCCCCCCCcCHHHHHHHHHhcCCCCCchhccCCCHHHHHHHHHHccCCHhHCHhHHHHH-HHHHHH
Confidence            47899999999999988877766665543 22233457899999999999999999999 55555 355543

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.16  E-value=2.4e-11  Score=67.96  Aligned_cols=63  Identities=14%  Similarity=0.277  Sum_probs=52.5

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      ++|||++ |.+||.+.+.......+..+..  .+.+..++.++.+++..||..||.+||++.++++
T Consensus       222 vl~el~t~g~~Pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~  285 (299)
T d1jpaa_         222 VMWEVMSYGERPYWDMTNQDVINAIEQDYR--LPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVN  285 (299)
T ss_dssp             HHHHHHTTSCCTTTTCCHHHHHHHHHTTCC--CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             HHHHHHhCCCCCCCCCCHHHHHHHHHcCCC--CCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence            3689997 8999999988888888776643  3345678999999999999999999999988764

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.14  E-value=1.4e-12  Score=74.28  Aligned_cols=35  Identities=34%  Similarity=0.650  Sum_probs=32.0

Q ss_pred             CCHHHHHHHHHhhccCCCCCCCHHHHhcCcccccc
Q psy10832         38 VSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQA   72 (90)
Q Consensus        38 ~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~   72 (90)
                      .++++++||.+||..||.+||+++++++||||+..
T Consensus       300 ~~~~~~dll~~mL~~dP~~Rpta~e~L~Hp~f~~~  334 (362)
T d1q8ya_         300 EAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDT  334 (362)
T ss_dssp             HHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTC
T ss_pred             cCHHHHHHHHHHCCCChhHCcCHHHHhcCcccCCC
Confidence            35678999999999999999999999999999854

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.14  E-value=1.8e-11  Score=68.11  Aligned_cols=70  Identities=10%  Similarity=0.198  Sum_probs=55.3

Q ss_pred             CEEeeecC-CCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc--Ccccccc
Q psy10832          1 MVVEMVDG-EPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ--HPFLRQA   72 (90)
Q Consensus         1 il~~~~~g-~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~--~~~~~~~   72 (90)
                      ++|||++| .+|+.+.........+..+..  .+.+..+++++++++.+||..||++||++++++.  ++||...
T Consensus       203 il~el~t~~~p~~~~~~~~~~~~~i~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~~~~  275 (285)
T d1fmka3         203 LLTELTTKGRVPYPGMVNREVLDQVERGYR--MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST  275 (285)
T ss_dssp             HHHHHHTTTCCSSTTCCHHHHHHHHHTTCC--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCS
T ss_pred             HHHHHHhCCCCCCCCCCHHHHHHHHHhcCC--CCCCcccCHHHHHHHHHHcccCHhHCcCHHHHHHHHhhhhcCC
Confidence            46889885 566677777777777776543  3345678999999999999999999999999876  7788754

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.11  E-value=3.1e-11  Score=67.46  Aligned_cols=63  Identities=16%  Similarity=0.286  Sum_probs=52.0

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      ++|||++ |.+||.+.+.......+..+..  +..+..+++++++++..||..||.+||++.++++
T Consensus       226 vl~ell~~g~~p~~~~~~~~~~~~i~~~~~--~~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~  289 (299)
T d1fgka_         226 LLWEIFTLGGSPYPGVPVEELFKLLKEGHR--MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE  289 (299)
T ss_dssp             HHHHHHTTSCCSSTTCCHHHHHHHHHTTCC--CCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHhccCCCCCCCCCCHHHHHHHHHcCCC--CCCCccchHHHHHHHHHHccCCHhHCcCHHHHHH
Confidence            3689997 7999999888877777766543  3445678999999999999999999999999864

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.11  E-value=2.2e-11  Score=68.29  Aligned_cols=64  Identities=13%  Similarity=0.227  Sum_probs=53.0

Q ss_pred             CEEeeecC-CCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcC
Q psy10832          1 MVVEMVDG-EPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQH   66 (90)
Q Consensus         1 il~~~~~g-~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~   66 (90)
                      ++|||++| .+||.+.+.......+..+..  +..+..++++++++|.+||..||++||++.+++++
T Consensus       215 il~ell~~~~~p~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~  279 (309)
T d1fvra_         215 LLWEIVSLGGTPYCGMTCAELYEKLPQGYR--LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS  279 (309)
T ss_dssp             HHHHHHTTSCCTTTTCCHHHHHHHGGGTCC--CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHhcCCCCCCCCCHHHHHHHHHhcCC--CCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            46889986 578988888888888877643  33456789999999999999999999999998865

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.09  E-value=1.5e-11  Score=67.70  Aligned_cols=63  Identities=14%  Similarity=0.233  Sum_probs=51.8

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      ++|||++ |.+||.+.+.......+..+..  ...+..+++++.+++..||..||.+||++.++++
T Consensus       189 il~el~t~~~~p~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~l~~  252 (262)
T d1byga_         189 LLWEIYSFGRVPYPRIPLKDVVPRVEKGYK--MDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLRE  252 (262)
T ss_dssp             HHHHHHTTSCCSCTTSCGGGHHHHHTTTCC--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHCCCCCCCCCCHHHHHHHHHcCCC--CCCCccCCHHHHHHHHHHcccCHhHCcCHHHHHH
Confidence            3689987 7999998888777777766543  3345678999999999999999999999998864

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.08  E-value=1.3e-11  Score=68.41  Aligned_cols=66  Identities=14%  Similarity=0.205  Sum_probs=48.9

Q ss_pred             CEEeeecCCCCCCCCCHHHH-HHHhhcCCC-CC-CCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcC
Q psy10832          1 MVVEMVDGEPPFFNEPPLQA-MRRIRDMPP-PK-LKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQH   66 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~-~~~i~~~~~-~~-~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~   66 (90)
                      ++|||++|..||.+.+.... ...+..+.. +. ...+..+++++.+++.+||..||.+||++.+++.+
T Consensus       198 ~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~  266 (276)
T d1uwha_         198 VLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILAS  266 (276)
T ss_dssp             HHHHHHHSSCTTTTCCCHHHHHHHHHHTSCCCCGGGSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCcchhccccchHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence            47899999999998654433 333433322 22 23345689999999999999999999999998765

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.08  E-value=3.6e-11  Score=66.11  Aligned_cols=64  Identities=17%  Similarity=0.254  Sum_probs=51.5

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcC
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQH   66 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~   66 (90)
                      ++|||++ |.+||...+.......+..+..  ...+...++++.+++..||..||.+||+++++++|
T Consensus       191 il~el~t~~~~~~~~~~~~~~~~~i~~~~~--~~~p~~~~~~l~~li~~cl~~~p~~Rps~~~il~~  255 (263)
T d1sm2a_         191 LMWEVFSEGKIPYENRSNSEVVEDISTGFR--LYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQ  255 (263)
T ss_dssp             HHHHHHTTSCCTTCSCCHHHHHHHHHHTCC--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHCCCCCCCCCCHHHHHHHHHhcCC--CCCccccCHHHHHHHHHHccCCHhHCcCHHHHHHH
Confidence            3689988 6777888888777777776643  23355679999999999999999999999998764

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.06  E-value=7.3e-11  Score=65.63  Aligned_cols=78  Identities=10%  Similarity=0.102  Sum_probs=54.6

Q ss_pred             CEEeeecCCC-CCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcCccccccCCCcccH
Q psy10832          1 MVVEMVDGEP-PFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPPALLV   79 (90)
Q Consensus         1 il~~~~~g~~-p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~~~~~~~~~~~~~~   79 (90)
                      ++|||++|.. ||.+.+.......+..+.  ....+..+++++++|+.+||..||.+||++.++++  ++........+.
T Consensus       205 ~l~ell~~~~p~~~~~~~~~~~~~i~~~~--~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~--~L~~~~~~~~~~  280 (287)
T d1opja_         205 LLWEIATYGMSPYPGIDLSQVYELLEKDY--RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ--AFETMFQESSIS  280 (287)
T ss_dssp             HHHHHHTTSCCSSTTCCHHHHHHHHHTTC--CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH--HHHHTTSSSCHH
T ss_pred             HHHHHHhCCCCCCCcchHHHHHHHHhcCC--CCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHH--HHHHHHHhCCCC
Confidence            3689998654 555666666655555543  23445678999999999999999999999999854  555544444444


Q ss_pred             HHH
Q psy10832         80 PLM   82 (90)
Q Consensus        80 ~~~   82 (90)
                      +.+
T Consensus       281 ~~i  283 (287)
T d1opja_         281 DEV  283 (287)
T ss_dssp             HHH
T ss_pred             hHh
Confidence            433

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.06  E-value=6.3e-11  Score=66.43  Aligned_cols=63  Identities=16%  Similarity=0.195  Sum_probs=52.4

Q ss_pred             CEEeeecC-CCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          1 MVVEMVDG-EPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         1 il~~~~~g-~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      ++|||++| .+||.+.+.......+..+..  ...+..+++.+.+++.+||..+|.+||++.++++
T Consensus       224 il~El~t~~~~p~~~~~~~~~~~~i~~~~~--~~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~  287 (308)
T d1p4oa_         224 VLWEIATLAEQPYQGLSNEQVLRFVMEGGL--LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIIS  287 (308)
T ss_dssp             HHHHHHHTSCCTTTTSCHHHHHHHHHTTCC--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHhCCCCCCCCCCHHHHHHHHHhCCC--CCCcccchHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            36889987 588999888888888877653  3335678999999999999999999999999875

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.06  E-value=2.1e-11  Score=68.65  Aligned_cols=64  Identities=16%  Similarity=0.168  Sum_probs=51.7

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcC
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQH   66 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~   66 (90)
                      ++|||++ |.+||.+.+.......+..+..  ...+..+++++.+++.+||..||.+||++.+++.|
T Consensus       202 il~el~t~g~~p~~~~~~~~~~~~i~~~~~--~~~p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~  266 (317)
T d1xkka_         202 TVWELMTFGSKPYDGIPASEISSILEKGER--LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIE  266 (317)
T ss_dssp             HHHHHHTTSCCTTTTSCGGGHHHHHHHTCC--CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHCCCCCCCCCCHHHHHHHHHcCCC--CCCCcccCHHHHHHHHHhCCCChhhCcCHHHHHHH
Confidence            3689998 8999998877666666666542  33456789999999999999999999999998765

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.02  E-value=1.3e-10  Score=64.93  Aligned_cols=62  Identities=11%  Similarity=0.168  Sum_probs=51.8

Q ss_pred             CEEeeecCC-CCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHh
Q psy10832          1 MVVEMVDGE-PPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELL   64 (90)
Q Consensus         1 il~~~~~g~-~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~   64 (90)
                      ++|||++|. +||.+.+.......+..+..+  ..+..+++++.+++.+||..+|.+||++.++.
T Consensus       231 vl~ell~~~~~p~~~~~~~e~~~~v~~~~~~--~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~  293 (301)
T d1lufa_         231 VLWEIFSYGLQPYYGMAHEEVIYYVRDGNIL--ACPENCPLELYNLMRLCWSKLPADRPSFCSIH  293 (301)
T ss_dssp             HHHHHHTTTCCTTTTSCHHHHHHHHHTTCCC--CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             hHHHHHccCCCCCCCCCHHHHHHHHHcCCCC--CCCccchHHHHHHHHHHcCCChhHCcCHHHHH
Confidence            468998884 789999988888888777533  34567899999999999999999999999885

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.92  E-value=1.1e-10  Score=65.11  Aligned_cols=64  Identities=19%  Similarity=0.321  Sum_probs=47.3

Q ss_pred             CEEeeecC-CCCCCCCCH-HHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcC
Q psy10832          1 MVVEMVDG-EPPFFNEPP-LQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQH   66 (90)
Q Consensus         1 il~~~~~g-~~p~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~   66 (90)
                      ++|||++| .+||.+... ......+..+.  .+..+..+++++.+++.+||..||.+||++.++++|
T Consensus       225 il~ellt~~~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~  290 (299)
T d1ywna1         225 LLWEIFSLGASPYPGVKIDEEFCRRLKEGT--RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  290 (299)
T ss_dssp             HHHHHHTTSCCSSTTCCCSHHHHHHHHHTC--CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHhCCCCCCCCCCHHHHHHHHHhcCC--CCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            36899886 578887543 33334444443  233456789999999999999999999999999865

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.91  E-value=8.5e-10  Score=61.10  Aligned_cols=63  Identities=14%  Similarity=0.253  Sum_probs=48.7

Q ss_pred             CEEeeecC-CCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          1 MVVEMVDG-EPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         1 il~~~~~g-~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      ++|||++| .+|+.+.+.......+..+..  .+.+..++.++.+++..||..||.+||++.+++.
T Consensus       202 il~el~t~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~~~~~l~~li~~cl~~~p~~RPt~~eil~  265 (283)
T d1mqba_         202 VMWEVMTYGERPYWELSNHEVMKAINDGFR--LPTPMDCPSAIYQLMMQCWQQERARRPKFADIVS  265 (283)
T ss_dssp             HHHHHHTTSCCTTTTCCHHHHHHHHHTTCC--CCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             HHHHHHhCCCCccccCCHHHHHHHHhccCC--CCCchhhHHHHHHHHHHHCcCCHhHCcCHHHHHH
Confidence            46899885 556666677777777766543  3345568899999999999999999999988864

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.88  E-value=2.6e-10  Score=63.93  Aligned_cols=64  Identities=16%  Similarity=0.304  Sum_probs=46.3

Q ss_pred             CEEeeec-CCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832          1 MVVEMVD-GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus         1 il~~~~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      ++|||++ |.+||.+.+....+..+...+. ....+...++++.++|.+||..||.+||++.++++
T Consensus       236 ~l~ellt~g~p~~~~~~~~~~~~~~i~~~~-~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~  300 (311)
T d1t46a_         236 FLWELFSLGSSPYPGMPVDSKFYKMIKEGF-RMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ  300 (311)
T ss_dssp             HHHHHHTTTCCSSTTCCSSHHHHHHHHHTC-CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHhCCCCCCCCCCHHHHHHHHHhcCC-CCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            3689987 7777877655444444433222 22334567999999999999999999999999864

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.85  E-value=4e-10  Score=63.26  Aligned_cols=64  Identities=9%  Similarity=0.069  Sum_probs=45.9

Q ss_pred             CEEeeecCCCCCCC-CCHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHhcC
Q psy10832          1 MVVEMVDGEPPFFN-EPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQH   66 (90)
Q Consensus         1 il~~~~~g~~p~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~~~   66 (90)
                      ++|||++|..||.. .+.......+..+..+  ..+...++++.+++..||..||.+||++.++++|
T Consensus       223 vl~El~t~~~p~~~~~~~~~~~~~i~~g~~~--~~p~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~  287 (311)
T d1r0pa_         223 LLWELMTRGAPPYPDVNTFDITVYLLQGRRL--LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR  287 (311)
T ss_dssp             HHHHHHTTSCCSCC------CHHHHHTTCCC--CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHCCCCCCCCCCHHHHHHHHHcCCCC--CCcccCcHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence            36899997766665 3444455556655433  3356779999999999999999999999998876

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.51  E-value=4.8e-09  Score=58.29  Aligned_cols=71  Identities=11%  Similarity=0.089  Sum_probs=45.0

Q ss_pred             CEEeeecCCCCCCCCCHHHHHHHh---hcC--CCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHH---HhcCccccc
Q psy10832          1 MVVEMVDGEPPFFNEPPLQAMRRI---RDM--PPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAE---LLQHPFLRQ   71 (90)
Q Consensus         1 il~~~~~g~~p~~~~~~~~~~~~i---~~~--~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~---l~~~~~~~~   71 (90)
                      ++|||++|..||.+.........+   ...  ..+.......+++++.+++..|+..+|.+||++++   +++|.|...
T Consensus       202 ~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~~~~  280 (299)
T d1ckia_         202 VLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ  280 (299)
T ss_dssp             HHHHHHHSSCTTCCCC-------HHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhCCCcccccchHHHHHHHHHhhcccCCCChhHhccCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHHHc
Confidence            368999999999875443222111   110  01111123467899999999999999999999764   566776554

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=97.86  E-value=9.4e-07  Score=48.91  Aligned_cols=64  Identities=11%  Similarity=0.049  Sum_probs=42.3

Q ss_pred             CEEeeecCCCCCCCC---CHHHHHHHhhcCC--CCCCCCCCCCCHHHHHHHHHhhccCCCCCCCHHHHh
Q psy10832          1 MVVEMVDGEPPFFNE---PPLQAMRRIRDMP--PPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELL   64 (90)
Q Consensus         1 il~~~~~g~~p~~~~---~~~~~~~~i~~~~--~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l~   64 (90)
                      ++|+|++|..||.+.   ........+....  .+.......+++++.+++..|+..+|+.||+.+.+.
T Consensus       202 ~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~  270 (293)
T d1csna_         202 VFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQ  270 (293)
T ss_dssp             HHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHH
T ss_pred             HHHHHHhCCCcCCCccchhHHHHHHHHHhccCCCChHHhcCCCCHHHHHHHHHHhcCCcccCcCHHHHH
Confidence            368999999999864   3333333332211  111112345789999999999999999999866553

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.85  E-value=1.2e-06  Score=48.78  Aligned_cols=26  Identities=12%  Similarity=0.109  Sum_probs=23.0

Q ss_pred             HHHHHHHHHhhccCCCCCCCHHHHhc
Q psy10832         40 PRLQGFLERLLVRDPLQRATAAELLQ   65 (90)
Q Consensus        40 ~~~~~~i~~~l~~~p~~R~~~~~l~~   65 (90)
                      ..+.+++.+||..||.+||++.+++.
T Consensus       265 ~~l~~li~~cl~~dp~~Rps~~ei~~  290 (303)
T d1vjya_         265 RVMAKIMRECWYANGAARLTALRIKK  290 (303)
T ss_dssp             HHHHHHHHTTCCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHHcccCHhHCcCHHHHHH
Confidence            35889999999999999999998864