Diaphorina citri psyllid: psy10867


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340---
MSLLNEVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQHKGPVLGAFLGLLPPAIHDYDFTPK
cccEEEEEEECcccccEEEEEcccccEEEEEcccccccEEEEEECccccEEEEEcccccEEEEEcccccccEEcccccccEEEEEEcccccEEEEEccccEEEEEcccccEEEEcccccccEEEEEEcccccEEEEEcccccEEEEEcccccEEEEEECccccccccccccccccEEEcccccccEEEEEEcccccccEEEEECccccEEEEEcccccEEEEEEccccEEEEEEcccccEEEEEcccccEEEEEccccccccEEECcccccccccccccccEEEEEEcccccEEEEEEccccEEEEEcccccEEEEEcccccEEEEEEECccccEEEECcccc
MSLLNEVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQHKGPVLGAFLGLLPPAIHDYDFT**
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MSLLNEVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQHKGPVLGAFLGLLPPAIHDYDFTPK

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
WD repeat-containing protein 18 May play a role during development.confidentQ9BV38
WD repeat-containing protein 18 May play a role during development.confidentQ4VBE8
WD repeat-containing protein 18 Involved in left-right determination through controlling the correct clustering and migration of dorsal forerunner cells (DFCs) and Kupffer's vesicle formation.confidentQ68EI0

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0005829 [CC]cytosolprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0045502 [MF]dynein bindingprobableGO:0003674, GO:0005488, GO:0005515
GO:0015630 [CC]microtubule cytoskeletonprobableGO:0005856, GO:0043232, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0043228, GO:0044424, GO:0043226
GO:0043234 [CC]protein complexprobableGO:0005575, GO:0032991
GO:0044430 [CC]cytoskeletal partprobableGO:0005856, GO:0005575, GO:0043232, GO:0044464, GO:0005623, GO:0005622, GO:0044446, GO:0043229, GO:0043228, GO:0044424, GO:0043226, GO:0044422
GO:0005634 [CC]nucleusprobableGO:0043231, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0044424, GO:0043227, GO:0043226
GO:0009987 [BP]cellular processprobableGO:0008150
GO:0044699 [BP]single-organism processprobableGO:0008150

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 2YMU, chain A
Confidence level:very confident
Coverage over the Query: 3-151,175-257,270-341
View the alignment between query and template
View the model in PyMOL
Template: 3SFZ, chain A
Confidence level:very confident
Coverage over the Query: 3-341
View the alignment between query and template
View the model in PyMOL