Psyllid ID: psy10867

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340---
Protein Sequence
MSLLNEVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQHKGPVLGAFLGLLPPAIHDYDFTPK
Secondary Structure (PSIPRED)
cccEEEEEEEEcccccEEEEEcccccEEEEEcccccccEEEEEEEccccEEEEEcccccEEEEEcccccccEEcccccccEEEEEEcccccEEEEEccccEEEEEcccccEEEEcccccccEEEEEEcccccEEEEEcccccEEEEEcccccEEEEEEEccccccccccccccccEEEcccccccEEEEEEcccccccEEEEEEccccEEEEEcccccEEEEEEccccEEEEEEcccccEEEEEcccccEEEEEccccccccEEEEcccccccccccccccEEEEEEcccccEEEEEEccccEEEEEcccccEEEEEcccccEEEEEEEEccccEEEEEcccc
Secondary Structure Prediction (SSPRO)
ccccEEEEEccccccEEEEEEcccccEEEEEcccccEEEEEEEEcccccEEEEEccccEEEEEEcccccEEEEEEcccccEEEEEEcccccEEEEccccEEEEEEcccccEEEEEccccccEEEEEEcccccEEEEEccccEEEEEEcccccEEEEEEcccccEEEEEEcccccEEEEEEcccccEEEEEEccccccEEEEEEccccEEEEEEcccccEEEEEcccccEEEEEEcccccEEEEEccccEEEEEEcccccEEEEcccccccEEEEEccccccEEEEEEcccccEEEEEccccEEEEEEcccccEEEEEcccccEEEEEEcccccEEEEcccccc
Coil and Loop (DISEMBL)
MSLLNEVafsydgsgaisvwepkggtllmsykgasvlsphsmcllgndyvlgvekgkpmiqawpvnsQEKAQLRLicpgrissmqaspdAAYIAVSIETKLHMWQISSGRLLatasshyqpitIVKWSadsnfivtggedgTICVWQLSRLICKqtvafgipgssgkgvtglteplhvksqhslpvthVTLSKLGaksrvasvshdrtckifdlctGEDLLSLILDTRLtcvafdgtedniymgtsegVIKSFclrqvprtrdhhiqdstsnpdfighekqvtslscSITGITLLSSSADETLKIWHTISRQCLRTIQHKGPVLGaflgllppaihdydftpk
Flexible Loop (DISEMBL)
MSLLNEVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKsrvasvshdrtCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIqdstsnpdfigHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQHKGPVLGAFLgllppaihdydftpk
Low Complexity Region (SEG)
MSLLNEVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQHKGPVLGAFLGLLPPAIHDYDFTPK
Disordered region (IsUnstruct)
*****EVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRT*************FIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQHKGPVLGAFLGLLPPAIHDYDF***
Disordered Region (DISOPRED)
MSLLNEVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQHKGPVLGAFLGLLPPAIHDY*FT**
Disordered Region (DISEMBL)
MSLLNEVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQHKGPVLGAFLGLLPPAIHDYDFTPK
Disordered Region (DISPRO)
*SLLNEVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQHKGPVLGAFLGLLPPAIHDYD****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSLLNEVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQHKGPVLGAFLGLLPPAIHDYDFTPK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	343	2.2.26 [Sep-21-2011]
Q68EI0	431	WD repeat-containing prot	yes	N/A	0.956	0.761	0.352	7e-57
Q9BV38	432	WD repeat-containing prot	yes	N/A	0.956	0.759	0.338	2e-52
Q4VBE8	431	WD repeat-containing prot	yes	N/A	0.903	0.719	0.332	3e-51
Q499N3	431	WD repeat-containing prot	yes	N/A	0.900	0.716	0.331	5e-51
Q3SZD4	432	WD repeat-containing prot	yes	N/A	0.941	0.747	0.334	3e-50
A5DTA8	521	Pre-rRNA-processing prote	N/A	N/A	0.623	0.410	0.297	2e-21
Q22006	529	Pre-rRNA-processing prote	yes	N/A	0.810	0.525	0.260	3e-20
Q10272	446	Pre-rRNA-processing prote	yes	N/A	0.842	0.647	0.254	3e-20
A8WSU9	532	Pre-rRNA-processing prote	N/A	N/A	0.819	0.528	0.268	8e-20
Q6BMP5	515	Pre-rRNA-processing prote	yes	N/A	0.612	0.407	0.275	2e-17

>sp|Q68EI0|WDR18_DANRE WD repeat-containing protein 18 OS=Danio rerio GN=wdr18 PE=2 SV=1

 Score =  221 bits (563), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 122/346 (35%), Positives = 196/346 (56%), Gaps = 18/346 (5%)

Query: 1   MSLLNEVAFSYDGSGAI---SVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGK 57
           MS   EV  S D +G +   +V++P  G+  +SY+G +  S  S+ +L  +Y+LG + GK
Sbjct: 1   MSAPVEVVLSADSAGQLFNCAVYDPHTGSEFLSYRGGNT-SSRSLTILNGEYILGAQLGK 59

Query: 58  PMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASS 117
             I  W +  +++ Q +++CPG ++ + ASPD  Y+   I   +++W++S+G LLA  S 
Sbjct: 60  NYINVWEIQRKDQLQQKIVCPGIVTCLCASPDGLYVLAGIAEAIYLWEVSTGNLLAILSR 119

Query: 118 HYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLH 177
           H+Q ++ +K++ DS+  V+GG+D    +W LS ++  Q  +   P           EP H
Sbjct: 120 HFQDLSCIKFTDDSSHFVSGGKDNLAFIWNLSSVV--QLDSSRTP-----------EPRH 166

Query: 178 VKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGT 237
           + S+HSLP+T +    +G ++RVA+ S D+T K++++ +GE LLS++ D  +  V FD  
Sbjct: 167 ILSRHSLPITDIHCGLMGPQARVATASLDQTVKVWEISSGEMLLSVLFDVGIMSVTFDPC 226

Query: 238 EDNIYMGTSEGVIKSFCLRQVPRTRDHHIQ-DSTSNPDFIGHEKQVTSLSCSITGITLLS 296
           E  ++ G S+G I    L     +RD   Q DS  N  F GH   VT LS S+ G  LLS
Sbjct: 227 EYFLFCGGSDGNIFQVSLCSTSLSRDKTFQSDSEGNQVFKGHRNLVTCLSVSMDGTVLLS 286

Query: 297 SSADETLKIWHTISRQCLRTIQHKGPVLGAFLGLLPPAIHDYDFTP 342
            S DET+++W   S+QC+ TI H+GPV  A +   P  +   D  P
Sbjct: 287 GSNDETVRMWDVQSKQCIWTINHRGPVTNAAIIPAPANMFLSDSHP 332

Involved in left-right determination through controlling the correct clustering and migration of dorsal forerunner cells (DFCs) and Kupffer's vesicle formation.
Danio rerio (taxid: 7955)

>sp|Q9BV38|WDR18_HUMAN WD repeat-containing protein 18 OS=Homo sapiens GN=WDR18 PE=1 SV=2

 Score =  206 bits (524), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 117/346 (33%), Positives = 187/346 (54%), Gaps = 18/346 (5%)

Query: 1   MSLLNEVAFSYDGSGAI---SVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGK 57
           M+   EVA   D +  +    VWE   G  L++Y+G     P  + LL  +Y+L  + GK
Sbjct: 1   MAAPMEVAVCTDSAAPMWSCIVWELHSGANLLTYRGGQA-GPRGLALLNGEYLLAAQLGK 59

Query: 58  PMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASS 117
             I AW +  +++ Q +++CPG ++ + ASP+  Y+   +   +H+W++S+G LL   S 
Sbjct: 60  NYISAWELQRKDQLQQKIMCPGPVTCLTASPNGLYVLAGVAESIHLWEVSTGNLLVILSR 119

Query: 118 HYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLH 177
           HYQ ++ ++++ DS+  ++GG+D  + VW L  ++  Q     IP            P H
Sbjct: 120 HYQDVSCLQFTGDSSHFISGGKDCLVLVWSLCSVL--QADPSRIPA-----------PRH 166

Query: 178 VKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGT 237
           V S H+LP+T +     G  +RVA+ S D+T K++++ +GE LLS++ D  +  V  D  
Sbjct: 167 VWSHHALPITDLHCGFGGPLARVATSSLDQTVKLWEVSSGELLLSVLFDVSIMAVTMDLA 226

Query: 238 EDNIYMGTSEGVIKSFCLRQVPRTRDHHIQ-DSTSNPDFIGHEKQVTSLSCSITGITLLS 296
           E +++ G SEG I    L   P  R+     +  +   F GH  QVT LS S  G  LLS
Sbjct: 227 EHHMFCGGSEGSIFQVDLFTWPGQRERSFHPEQDAGKVFKGHRNQVTCLSVSTDGSVLLS 286

Query: 297 SSADETLKIWHTISRQCLRTIQHKGPVLGAFLGLLPPAIHDYDFTP 342
            S DET+++W   S+QC+RT+  KGPV  A + L P ++   DF P
Sbjct: 287 GSHDETVRLWDVQSKQCIRTVALKGPVTNAAILLAPVSMLSSDFRP 332

May play a role during development.

Homo sapiens (taxid: 9606)

>sp|Q4VBE8|WDR18_MOUSE WD repeat-containing protein 18 OS=Mus musculus GN=Wdr18 PE=1 SV=1

 Score =  202 bits (514), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 108/325 (33%), Positives = 178/325 (54%), Gaps = 15/325 (4%)

Query: 19  VWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICP 78
           VWE   G  L++Y+G     P  + LL  +Y+L  ++GK  I AW +  +++ Q +++CP
Sbjct: 22  VWELHSGANLLTYRGGQA-GPRGLALLNGEYLLAAQQGKNYICAWELQRKDQLQQKIMCP 80

Query: 79  GRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGG 138
           G ++ +  +P+  Y+   I   +++W++ +G LL   S HYQ ++ +K++ D +  V+ G
Sbjct: 81  GPVTCLTTAPNGLYVLAGIAESIYLWEVCTGNLLVILSRHYQDVSCLKFTGDGSHFVSAG 140

Query: 139 EDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKS 198
           +D     W L  ++                 + +  P HV SQH+LP+T +     G  +
Sbjct: 141 KDCLALAWSLCSVLQADP-------------SRILAPRHVWSQHTLPITDLHCGFGGPMA 187

Query: 199 RVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQV 258
           RVA+ S D+T K++ + +G+ LLS++ D  +T V  D  E +I+ G S+G I    L   
Sbjct: 188 RVATASLDQTVKLWAISSGDLLLSVLFDMGITSVTMDLAEHHIFCGGSDGSIFQVDLCSW 247

Query: 259 PRTRDHHIQ-DSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTI 317
           P  R+H  Q +  +   F GH  QVT LS S  G  LLS S DE++++W   S+QCLRT+
Sbjct: 248 PGLREHSFQPEQNTGKVFKGHRNQVTCLSVSTDGSVLLSGSHDESVRLWDVKSKQCLRTV 307

Query: 318 QHKGPVLGAFLGLLPPAIHDYDFTP 342
             KGPV  A + L PP++ + +F P
Sbjct: 308 TLKGPVTNAAIILAPPSMLNPEFRP 332

May play a role during development.

Mus musculus (taxid: 10090)

>sp|Q499N3|WDR18_RAT WD repeat-containing protein 18 OS=Rattus norvegicus GN=Wdr18 PE=2 SV=1

 Score =  201 bits (512), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 108/326 (33%), Positives = 179/326 (54%), Gaps = 17/326 (5%)

Query: 19  VWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICP 78
           VWE   G  L++Y+G     P  + LL  +Y+L  ++GK  I AW +  +++ Q +++CP
Sbjct: 22  VWELHSGANLLTYRGGQA-GPRGLALLNGEYLLAAQQGKNYICAWELQRKDQLQQKIMCP 80

Query: 79  GRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGG 138
           G ++ +  +P+  Y+   I   +++W++S+G LL   S HYQ ++ +K++ D +  V+ G
Sbjct: 81  GPVTCLTTAPNGLYVLAGIAESIYLWEVSTGNLLVILSRHYQDVSCLKFTGDGSHFVSAG 140

Query: 139 EDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKS 198
           +D  +  W L  ++                 + +  P HV SQH+LP+T +     G  +
Sbjct: 141 KDCLVLAWSLCSVLQADP-------------SRILAPRHVWSQHTLPITDLHCGFGGPMA 187

Query: 199 RVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVI--KSFCLR 256
           RVA+ S D+T K++ + +G+ LLS++ D  +T V  D  E  I+ G S+G I     C R
Sbjct: 188 RVATASLDQTMKLWAISSGDLLLSVLFDMGITSVTMDLAEHYIFCGGSDGSIFQVDLCSR 247

Query: 257 QVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRT 316
             PR +    + +T    F GH  QVT LS S  G  LLS S DE++++W   S+QC+RT
Sbjct: 248 PGPREQSFQPEQNTGKV-FKGHRNQVTCLSVSTDGSILLSGSHDESVRLWDVKSKQCVRT 306

Query: 317 IQHKGPVLGAFLGLLPPAIHDYDFTP 342
           +  KGPV  A + L PP++ + +F P
Sbjct: 307 VPLKGPVTNAAITLAPPSMLNPEFRP 332

May play a role during development.

Rattus norvegicus (taxid: 10116)

>sp|Q3SZD4|WDR18_BOVIN WD repeat-containing protein 18 OS=Bos taurus GN=WDR18 PE=2 SV=1

 Score =  199 bits (506), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 114/341 (33%), Positives = 182/341 (53%), Gaps = 18/341 (5%)

Query: 6   EVAFSYDGSGAI---SVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQA 62
           EVA   D +  +    VWE   G  L++Y+G     P  + LL  +Y+L  + GK  I A
Sbjct: 6   EVAVCTDSAAQLWSCVVWELHSGANLLTYRGGQA-GPRGLALLNGEYLLAAQLGKNYICA 64

Query: 63  WPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPI 122
           W +  +++ Q +++CPG ++ +  SP+  Y+   I   +++W++S+G LL   S HYQ +
Sbjct: 65  WELQRKDQLQQKIMCPGPVTCLTTSPNGLYVLAGISENIYLWEVSTGNLLVILSRHYQDV 124

Query: 123 TIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQH 182
           + ++++ DS+  ++GG+D  +  W L  ++  Q      P            P HV S+H
Sbjct: 125 SCLQFTGDSSHFISGGKDCLVLAWSLCSVL--QADPSRTPA-----------PRHVWSRH 171

Query: 183 SLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIY 242
           +LP+T +     G  +RVA+ S D+T K++++ +GE LLS++ D  +  V  D  E  ++
Sbjct: 172 TLPITDLHCGFGGPLARVATASLDQTVKLWEVSSGELLLSVLFDVGILAVTMDLAEHYMF 231

Query: 243 MGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPD-FIGHEKQVTSLSCSITGITLLSSSADE 301
            G S+G I    L   P  R+   Q    +   F GH  QVT LS S  G  LLS S DE
Sbjct: 232 CGGSDGSIFQVDLCTWPGQREKSFQPEQEHGKVFRGHRNQVTCLSVSTDGSVLLSGSHDE 291

Query: 302 TLKIWHTISRQCLRTIQHKGPVLGAFLGLLPPAIHDYDFTP 342
           T+++W   S+QCLRT+  KGPV  A + L P ++   DF P
Sbjct: 292 TVRLWDVQSQQCLRTVTLKGPVTNACIMLAPVSMLSSDFRP 332

May play a role during development.

Bos taurus (taxid: 9913)

>sp|A5DTA8|IPI3_LODEL Pre-rRNA-processing protein IPI3 OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) GN=IPI3 PE=3 SV=1

 Score =  103 bits (257), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 119/239 (49%), Gaps = 25/239 (10%)

Query: 100 KLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAF 159
           KL++W+++SG LL    +HYQ IT +  S    F+VTGGED  I VW L+ LI      +
Sbjct: 137 KLYIWELASGDLLCVKEAHYQGITRIDLSLCGTFLVTGGEDARIMVWNLADLIA----IY 192

Query: 160 GIPG-----SSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLG--AKSRVASVSHDRTCKIF 212
           G  G      S   V    +P +  + ++LP+T  TL+++G  A  ++ + S D T +I+
Sbjct: 193 GQAGLINETDSSSTVNRSGKPYYSITDNTLPITDFTLNQVGNLADLKLYTASKDSTVRIY 252

Query: 213 DLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTR---------D 263
           D+ T + L + IL   +TC+A D     +Y G + G+IK+  L +  +           D
Sbjct: 253 DITTKQQLTTFILPQPVTCLARDPANRQLYAGLANGLIKTIPLYKFNQHTSVLEAVGGLD 312

Query: 264 HHIQDSTSNPD----FIGHEK-QVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTI 317
             I     +P+    F+ HE  +VT L  S+ G  L+S      + +    ++Q +++ 
Sbjct: 313 RIITVDQEDPNMLSTFVQHENHKVTKLCVSMDGTNLISGDDAGQVFVSDIATKQTIKSF 371

Component of the RIX1 complex required for processing of ITS2 sequences from 35S pre-rRNA.

Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) (taxid: 379508)

>sp|Q22006|PRO1_CAEEL Pre-rRNA-processing protein pro-1 OS=Caenorhabditis elegans GN=pro-1 PE=2 SV=1

 Score = 99.8 bits (247), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 80/307 (26%), Positives = 141/307 (45%), Gaps = 29/307 (9%)

Query: 21  EPKGGTLLMSYKGASVLSPHSMCL--LGND--YVLGVEKGKPMIQAWPVNSQEKAQLRLI 76
           +P+ G    SYKG+ +    +  +  LG+D  +V+   K +P++    V+ +++   + +
Sbjct: 36  DPRTGVSSWSYKGSELQGASTGLVEPLGHDGEHVVITTKERPLVHVLAVHPKDRFHQKCV 95

Query: 77  CPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVT 136
            PG +S++ +     ++ +SI+ +L+ W +S+G LL+   +HYQ IT +  S D + I T
Sbjct: 96  LPGPVSAIVSDNSGHFVFMSIKRQLYCWLLSTGELLSVIDAHYQNITKIVISDDDSMIFT 155

Query: 137 GGEDGTICVWQLSRLIC---KQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSK 193
             +DG +  + ++ L+      TVA                P    + H+L ++ + ++ 
Sbjct: 156 ASKDGAVHGYLVTDLVSADRDHTVA----------------PFRKWASHTLSISDLKITN 199

Query: 194 LGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSF 253
            G+  RV S   D    +  +     +L    D  LT  A D  E  I++GT  G I   
Sbjct: 200 -GSNPRVLSAGADHIACLHSISMDSVILKASSDRPLTACAIDPAETRIFIGTEVGNIAQI 258

Query: 254 CLRQV-PRTRDHHIQDSTS-NPDFI---GHEKQVTSLSCSITGITLLSSSADETLKIWHT 308
            L Q+ P  RD  +Q     N  F    GH  +++ L+ +  G  L S  A     IW  
Sbjct: 259 NLFQLAPEERDLLVQAGDEHNTKFRVLNGHSDEISRLAINTDGTLLASGDASGKYCIWEI 318

Query: 309 ISRQCLR 315
            S QCL+
Sbjct: 319 SSHQCLK 325

Required in the soma to promote normal proliferation and prevent germline tumor formation. Acts in the ribosome biogenesis pathway by processing ITS2 sequences from rRNA intermediates during 26S rRNA maturation.

Caenorhabditis elegans (taxid: 6239)

>sp|Q10272|IPI3_SCHPO Pre-rRNA-processing protein crb3/ipi3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=crb3 PE=1 SV=1

 Score = 99.8 bits (247), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 83/326 (25%), Positives = 153/326 (46%), Gaps = 37/326 (11%)

Query: 25  GTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSM 84
           GTL+ +++ +S  + ++ C   N ++L  +  +P +       +E     +I P  +  +
Sbjct: 26  GTLVSTFRQSSP-AKNATCTTLN-HLLSAQHTRPQLNIHNF-GKEILDQSIILPEILICV 82

Query: 85  QASPDAAYIAVSIET-KLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTI 143
           Q+SP  +++A   E   L++W + SG L+    +HYQP+TI+K+S D   + T   DG +
Sbjct: 83  QSSPCGSWLAAGTEKGNLYIWSLKSGALIYFFRAHYQPLTILKFSNDGMVLFTASNDGDV 142

Query: 144 CVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASV 203
             W +S L+  Q   F    SS K ++  +   H +S  S+ +    +       R+ + 
Sbjct: 143 FAWLISTLV-DQNSTFETSNSSVKAISHFSG--HKRSIVSMEIGPGPI----VSGRLYTA 195

Query: 204 SHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVI-------KSFCLR 256
           S D T +I+D+ TG  L ++ L +  +C+  D +E  +Y+G  +G+I        S    
Sbjct: 196 SEDNTIRIWDVSTGNLLTTIALPSTPSCMTVDPSERVVYVGNEKGIIWIPLYTGSSTFSN 255

Query: 257 QVPRTRDHHIQDSTSNPDFIGH------------------EKQVTSLSCSITGITLLSSS 298
            V   +     D+T+ P+ IG                   +  +T+L+ S     L+S  
Sbjct: 256 NVKEKKRVTSVDNTTIPNAIGGMGRVVDYNDSRESSIISCQSPITTLTVSFDASLLISGD 315

Query: 299 ADETLKIWHTISRQCLRT-IQHKGPV 323
            D  + +W ++SRQ LR  +Q+  PV
Sbjct: 316 KDGNVLVWDSVSRQVLRRLVQYYSPV 341

Involved in the processing of ITS2 sequences from 35S pre-rRNA.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|A8WSU9|PRO1_CAEBR Pre-rRNA-processing protein pro-1 OS=Caenorhabditis briggsae GN=pro-1 PE=3 SV=1

 Score = 98.2 bits (243), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 84/313 (26%), Positives = 143/313 (45%), Gaps = 32/313 (10%)

Query: 12  DGSGAISVWEPKGGTLLMSYKGAS--VLSPHSMCLLGND--YVLGVEKGKPMIQAWPVNS 67
           D    +S W  KGG L    +GAS  ++ P     LG D  +++   K +P++    V+S
Sbjct: 36  DPRTGVSSWSYKGGEL----QGASTGLVEP-----LGKDGEHIVVTTKDRPLVHVIAVHS 86

Query: 68  QEKAQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKW 127
           +++   + + PG +S++ +     +  +SI+ +L+ W +S+G LL+   +HYQ IT +  
Sbjct: 87  KDRFHQKCVLPGPVSAICSDRSGRFAFMSIKRQLYCWLLSTGELLSVIDAHYQNITKLAL 146

Query: 128 SADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVT 187
           S D + + T  +DG I  + ++ L+           S+ +  T    P    + H+L V+
Sbjct: 147 SDDDSMVFTASKDGAIHGYLVTELV-----------SADRDST--VAPFRKWASHTLAVS 193

Query: 188 HVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSE 247
            + ++  G+  R+ +   D    +  +     +L    D  LT  A D  E  I++GT  
Sbjct: 194 DLKITH-GSNPRILTTGADHIACLHSISMDSVILKASADRPLTSCAIDSAETRIFIGTEV 252

Query: 248 GVIKSFCLRQV-PRTRDHHIQDSTS-NPDFI---GHEKQVTSLSCSITGITLLSSSADET 302
           G I    L Q+    RD  IQ     N  F    GH  ++T L+ +  G  L S  A   
Sbjct: 253 GNIAQINLFQLGAEERDLLIQAGDEHNTKFRVLNGHSDEITRLTINTDGTLLASGDASGK 312

Query: 303 LKIWHTISRQCLR 315
             IW   S QCL+
Sbjct: 313 YCIWEISSHQCLK 325

Required in the soma to promote normal proliferation and prevent germline tumor formation. Acts in the ribosome biogenesis pathway by processing ITS2 sequences from rRNA intermediates during 26S rRNA maturation.

Caenorhabditis briggsae (taxid: 6238)

>sp|Q6BMP5|IPI3_DEBHA Pre-rRNA-processing protein IPI3 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=IPI3 PE=3 SV=2

 Score = 90.1 bits (222), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/254 (27%), Positives = 116/254 (45%), Gaps = 44/254 (17%)

Query: 100 KLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAF 159
           K+++W+++SG LL    +HYQ IT +K+S    F+V+G  D    VW+ S LI      +
Sbjct: 129 KIYVWELASGNLLCVKEAHYQAITAIKFSQCGTFLVSGSSDARCMVWRTSDLIS----VY 184

Query: 160 GIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKS--RVASVSHDRTCKIFDLCTG 217
                S   +    +P    + HSLP+T + +S+ G  S  R+ +VS D T +I+D+ T 
Sbjct: 185 NKDEESSINI----KPFASFTDHSLPITDLAISEAGIISDLRLYTVSRDSTLRIYDIMTK 240

Query: 218 EDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQV-PRTR-------------- 262
             L + +L + + CV  D      Y+G S G+I++  L Q+ P T               
Sbjct: 241 SLLTTFVLPSGIECVTKDPANRACYVGLSNGLIRTVPLYQINPNTSVLESIGGRGKIVTL 300

Query: 263 ----------DHHIQDSTSNPDFIGHEKQ---------VTSLSCSITGITLLSSSADETL 303
                      HH Q  ++ P      K+         VT LS ++ G  L+S  +   +
Sbjct: 301 DTDPNLLSTFVHHQQRLSTEPLHKTLNKKTTTEEKPILVTRLSITMDGSNLISGDSAGRV 360

Query: 304 KIWHTISRQCLRTI 317
            +   +SRQ ++T 
Sbjct: 361 YVSDIVSRQVVKTF 374

Component of the RIX1 complex required for processing of ITS2 sequences from 35S pre-rRNA.

Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) (taxid: 284592)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	343
193613094	480	PREDICTED: WD repeat-containing protein	0.976	0.697	0.449	2e-79
357614607	1337	hypothetical protein KGM_15711 [Danaus p	0.982	0.252	0.393	1e-68
157138647	422	PAF acetylhydrolase 45 kDa subunit, puta	0.941	0.765	0.384	8e-63
170048384	444	WD repeat protein 18 [Culex quinquefasci	0.941	0.727	0.364	3e-60
383856392	424	PREDICTED: WD repeat-containing protein	0.897	0.726	0.374	5e-59
405952754	2469	ATP-binding cassette sub-family A member	0.895	0.124	0.376	7e-56
260813306	418	hypothetical protein BRAFLDRAFT_82717 [B	0.924	0.758	0.368	9e-56
82524836	428	WD repeat domain 18 [Xenopus (Silurana)	0.938	0.752	0.35	9e-56
91084787	407	PREDICTED: similar to PAF acetylhydrolas	0.862	0.727	0.387	1e-55
62826031	427	LOC733228 protein [Xenopus laevis]	0.909	0.730	0.360	1e-55

>gi|193613094|ref|XP_001944470.1| PREDICTED: WD repeat-containing protein 18-like [Acyrthosiphon pisum]

 Score =  302 bits (773), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 152/338 (44%), Positives = 216/338 (63%), Gaps = 3/338 (0%)

Query: 6   EVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPV 65
           EVAF  DG+   +VW+   GT+L +Y+  + +  + M LLGNDY++  +KG P+IQAWP+
Sbjct: 8   EVAFVSDGTSGATVWDTTNGTMLKTYRHTASIGQNCMSLLGNDYLIAADKG-PLIQAWPI 66

Query: 66  NSQEKA-QLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPITI 124
           NSQE+  Q+R++C G+I+S+ ASPD  YIAV+I  KL +W   SGRLL T S H+QPITI
Sbjct: 67  NSQERTHQVRMLCGGKINSLAASPDGLYIAVAISEKLQVWMACSGRLLTTVSRHFQPITI 126

Query: 125 VKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSL 184
           +KWS+D +++VTGGEDG +CVW L++LI     +      SG  +   + P ++ S HS+
Sbjct: 127 IKWSSDGSYLVTGGEDGLVCVWSLAKLINTSQSSMPQTFISGDQIDQ-SAPTYIFSDHSV 185

Query: 185 PVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMG 244
            +T V +       R+ + S D+TCKI+DL TG  LLS+  D   + +  D  E  +Y+G
Sbjct: 186 RITGVYIGNCTRCIRIFTTSVDKTCKIYDLSTGIMLLSIAFDIIPSSLTVDSIETAVYIG 245

Query: 245 TSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLK 304
           T+ G I+SF L   PRTR+ ++ D  S   F+GH K VT+LS S+ G  L+S S D T++
Sbjct: 246 TTAGPIRSFDLTSPPRTRECYVSDKESGIKFVGHAKAVTALSVSLFGDMLVSGSTDCTIR 305

Query: 305 IWHTISRQCLRTIQHKGPVLGAFLGLLPPAIHDYDFTP 342
            WH  SRQCLRTIQ K PV+  FL L+P  +   +  P
Sbjct: 306 TWHVASRQCLRTIQLKEPVINMFLTLIPRQLTANELEP 343

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357614607|gb|EHJ69171.1| hypothetical protein KGM_15711 [Danaus plexippus]

 Score =  266 bits (680), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 136/346 (39%), Positives = 205/346 (59%), Gaps = 9/346 (2%)

Query: 1   MSLLNEVAFSYDGSGAI---SVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGK 57
           MS L EV  + D +  +   S+W+P  GT LM+YKG       ++  +G DY+  VEK K
Sbjct: 1   MSNLLEVLVTCDSNNTLWTSSIWDPNTGTNLMAYKGGGTSEKGTLNFIGKDYIASVEKTK 60

Query: 58  PMIQAWPVNSQEKAQ-LRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATAS 116
           P++  WP+NS +  Q +R I PG+ S++  S D  Y    IE K+++WQI+SG LL   +
Sbjct: 61  PILHVWPLNSHQTVQGMRFILPGKASALAISHDGTYCVAGIEDKIYLWQIASGSLLTIIN 120

Query: 117 SHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPL 176
            HYQ + ++K+++DS F V+  EDG + VW L+ +     V         + + G  +P+
Sbjct: 121 RHYQKVNLLKFTSDSRFFVSAAEDGMVMVWSLATVAANAEVEL-----VTQAIAGQHDPV 175

Query: 177 HVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDG 236
           ++ S HSLPV  + +SKLG   R+ +VS DRTCKI+DL +GE LL+L+ D  L+ +  D 
Sbjct: 176 YIFSDHSLPVIDMCISKLGLHGRLFTVSSDRTCKIYDLTSGEMLLNLVFDEPLSSITLDV 235

Query: 237 TEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLS 296
            E NI++G++EG I    L++    RD  +  + ++  F GH K VT LS S+ G  L+S
Sbjct: 236 LELNIFVGSTEGKIFEIGLQKQHTNRDVLVNGNDTSQIFSGHSKAVTCLSVSLNGEILMS 295

Query: 297 SSADETLKIWHTISRQCLRTIQHKGPVLGAFLGLLPPAIHDYDFTP 342
              DE + +WH  S+Q +RTI+HKGP+  AF      AI+D DF+P
Sbjct: 296 GGNDEQVILWHIRSKQPVRTIKHKGPITNAFFTQNFAAIYDQDFSP 341

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157138647|ref|XP_001657325.1| PAF acetylhydrolase 45 kDa subunit, putative [Aedes aegypti] gi|108869460|gb|EAT33685.1| AAEL014037-PA [Aedes aegypti]

 Score =  246 bits (629), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 133/346 (38%), Positives = 198/346 (57%), Gaps = 23/346 (6%)

Query: 1   MSLLNEVAFSYDGSGAI---SVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGK 57
           MS   EVA + D S  +    VW+ + GT L+SYKG      H++  + N Y+L     K
Sbjct: 1   MSDCVEVAITSDSSDQLWSCCVWDVRTGTHLISYKGGGAPGAHTLANISNQYILTGNMVK 60

Query: 58  PMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASS 117
           PM+  WP+N  E    R I PGR +++  SPD  Y  V+++  ++++Q+++G +LAT S 
Sbjct: 61  PMLHIWPINRHEAISTRFILPGRPTAVAVSPDGCYCVVAVQETINVYQLATGAMLATISR 120

Query: 118 HYQPITIVKWSADSNFIVTGGEDGTICVWQLS---RLICKQTVAFGIPGSSGKGVTGLTE 174
           HYQ + +++++ D    ++ G+DG + VW LS   R+  KQ++                 
Sbjct: 121 HYQAVNVLRFTDDGTHFISAGQDGMVLVWSLSHVIRVFQKQSL----------------N 164

Query: 175 PLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAF 234
            L+  S H+LPVT + + K G K+   SVS DR+CK++DL +G  LL+L+    L+ V  
Sbjct: 165 ALYSFSDHALPVTDLYVGKGGMKALFCSVSVDRSCKVYDLASGSMLLNLVFQEPLSSVTM 224

Query: 235 DGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPD-FIGHEKQVTSLSCSITGIT 293
           D  E N+++GT+EG I SF L   PRT+++H+       + F+GH+K VT LS SI G T
Sbjct: 225 DTLESNVFVGTNEGPIYSFSLLSPPRTKEYHVDRKQQQKNVFLGHKKAVTCLSVSIDGET 284

Query: 294 LLSSSADETLKIWHTISRQCLRTIQHKGPVLGAFLGLLPPAIHDYD 339
           LLS  ADE + +WHT SRQ LR I HKG V  A   L P A+ D +
Sbjct: 285 LLSGGADENVFLWHTKSRQQLRVIPHKGIVTNAQFMLTPKAMFDQE 330

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170048384|ref|XP_001852246.1| WD repeat protein 18 [Culex quinquefasciatus] gi|167870527|gb|EDS33910.1| WD repeat protein 18 [Culex quinquefasciatus]

 Score =  238 bits (607), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 126/346 (36%), Positives = 198/346 (57%), Gaps = 23/346 (6%)

Query: 1   MSLLNEVAFSYDGSGAI---SVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGK 57
           MS   EVA + D S  +    VW+ + GT LMSYKG      H++ ++ N +VL     K
Sbjct: 25  MSDCVEVAITSDSSDQLWSCCVWDVRTGTQLMSYKGGGAPGAHTLSVVKNQFVLTGNLVK 84

Query: 58  PMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASS 117
           PM+  WP+N  E    R I PGR +++  SPD  Y  V+++  ++++Q+ +G +L T S 
Sbjct: 85  PMLHVWPINRHEPVSTRFILPGRPTAVAVSPDGNYCLVAVQETIYVYQLVTGAILTTVSR 144

Query: 118 HYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLI---CKQTVAFGIPGSSGKGVTGLTE 174
           HYQ + I++++ D +  ++ G+DG + VW L++++    KQT++                
Sbjct: 145 HYQTVNILRFTDDGSHFISAGQDGMVLVWSLAQVVQVFQKQTLS---------------- 188

Query: 175 PLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAF 234
            L+  S H+LPVT + +   G K+   SVS DRTCKI+DL +G  LL+++    L+ V  
Sbjct: 189 ALYSFSDHALPVTDLYVGAGGMKAVFCSVSVDRTCKIYDLASGTMLLNMVFPEALSSVTM 248

Query: 235 DGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPD-FIGHEKQVTSLSCSITGIT 293
           D  E N+++GT++G I  F L   PRT+++H   +    + F+GH+K VT LS S+ G T
Sbjct: 249 DKLESNVFVGTNDGPIYKFSLLSPPRTKEYHFDRAQQQKNAFLGHKKSVTCLSVSVDGET 308

Query: 294 LLSSSADETLKIWHTISRQCLRTIQHKGPVLGAFLGLLPPAIHDYD 339
           LLS  ADE + +WH  SRQ +RTI H+G V  A   + P A+ + +
Sbjct: 309 LLSGGADENVFVWHIKSRQQIRTIPHQGAVTNATFLMTPKAMFNQE 354

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383856392|ref|XP_003703693.1| PREDICTED: WD repeat-containing protein 18-like [Megachile rotundata]

 Score =  234 bits (597), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 124/331 (37%), Positives = 182/331 (54%), Gaps = 23/331 (6%)

Query: 6   EVAFSYDGSG---AISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQA 62
           EV  + D +G   + +VW+P+ G+LL +YK A  LS  ++ LL + YV+G +  KP I  
Sbjct: 9   EVILTSDSTGEHWSAAVWDPRTGSLLSTYKNAGALSHRTLQLLNDSYVIGADLTKPRIHI 68

Query: 63  WPVNSQEKA-QLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQP 121
           WP+N+      LRL  PG+++++  SP+ AYI  +I  KL +WQ  +GRLL   S HYQ 
Sbjct: 69  WPINNHNPVPNLRLTTPGKVTALCCSPNGAYIVAAISEKLFLWQACNGRLLGNLSQHYQT 128

Query: 122 ITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQ 181
           ++ + +S D +   +G EDG + VW L R++                   L   LH  S 
Sbjct: 129 VSCLSFSKDGSLFASGAEDGLVFVWSLYRVLNDD----------------LPTALHAFSH 172

Query: 182 HSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNI 241
           HSLPV  +     GAK R+ SVS DRTC ++D  +G+ LL+L+ +  LT V  +  E ++
Sbjct: 173 HSLPVKDLQFGHAGAKGRLCSVSLDRTCNVYDPGSGQLLLTLVFNVPLTAVCMNAKESDL 232

Query: 242 YMGTSEGVIKSFCLRQVPRTRDHHIQ---DSTSNPDFIGHEKQVTSLSCSITGITLLSSS 298
           ++G ++G +  F L + PR  +HH+Q   D      F GH+  V +LS SI    LLS S
Sbjct: 233 FVGCTDGSVYRFNLHEPPRGIEHHVQIRKDDGETATFQGHKSSVATLSVSIDCRYLLSGS 292

Query: 299 ADETLKIWHTISRQCLRTIQHKGPVLGAFLG 329
               + +W   SRQ LRTI HKGP+  AF  
Sbjct: 293 TTGEVHLWDIASRQILRTIDHKGPITAAFFA 323

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|405952754|gb|EKC20528.1| ATP-binding cassette sub-family A member 1 [Crassostrea gigas]

 Score =  223 bits (569), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 122/324 (37%), Positives = 187/324 (57%), Gaps = 17/324 (5%)

Query: 23  KGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRIS 82
           + GT ++++KG +  +PH + +LG  Y++     KP++  WP++ ++    +++CPG ++
Sbjct: 2   ESGTSVVTFKGGTS-APHGVGVLGQQYLVSASPTKPVLSLWPLHKRDTTCSKMVCPGNVT 60

Query: 83  SMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGT 142
           +++ + D AYI  +I  K+++WQ+ +GRLL+  S HYQ IT +K S  S  IV+GGED  
Sbjct: 61  ALEITEDGAYIVAAIAEKIYVWQVCTGRLLSILSRHYQTITCLKSS--SGLIVSGGEDSL 118

Query: 143 ICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVAS 202
           + VW L++ +C+Q +    P            P  V S HSLPVT + L   G  SRV S
Sbjct: 119 VIVWSLAKALCEQ-LEHRAP----------VTPERVWSSHSLPVTDLHLGVGGHLSRVVS 167

Query: 203 VSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTR 262
            S D+TC++FD+ +GE L + + +  +  V  D  E  ++ G+S G I +  L + P  R
Sbjct: 168 SSLDQTCRLFDVNSGELLCTFVFEVGICSVVLDPAECRLFAGSSSGSIYAVNLFETPVRR 227

Query: 263 DHHIQDSTSNPD---FIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQH 319
           + HI D   +     F GHEKQVT L  ++ G  L+S S D  +KIW   S QCLRTI+H
Sbjct: 228 ERHITDKKEDQSCQRFDGHEKQVTCLCVTMDGCQLVSGSHDHKVKIWDIFSGQCLRTIEH 287

Query: 320 KGPVLGAFLGLLPPAIHDYDFTPK 343
           KGPV  A L + PP I + D   K
Sbjct: 288 KGPVTNAKLTMAPPGIVNPDVKYK 311

Source: Crassostrea gigas

Species: Crassostrea gigas

Genus: Crassostrea

Family: Ostreidae

Order: Ostreoida

Class: Bivalvia

Phylum: Mollusca

Superkingdom: Eukaryota

>gi|260813306|ref|XP_002601359.1| hypothetical protein BRAFLDRAFT_82717 [Branchiostoma floridae] gi|229286654|gb|EEN57371.1| hypothetical protein BRAFLDRAFT_82717 [Branchiostoma floridae]

 Score =  223 bits (569), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 123/334 (36%), Positives = 182/334 (54%), Gaps = 17/334 (5%)

Query: 6   EVAFSYDGSGAI---SVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQA 62
           E A + D SG +    +W+ + GT L +YKG    +P  +CLLGN Y+L     KP+I  
Sbjct: 7   EAALTSDTSGQLWSSCLWDLQSGTTLATYKGDGS-APRGLCLLGNQYLLSAANNKPLIHV 65

Query: 63  WPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPI 122
           W +  ++  Q R++C GR+S+M  SPD   +   I  K+++WQ+ +G LLA  + HYQ +
Sbjct: 66  WALQRRDHVQQRMVCGGRVSAMAVSPDGTLVVAGIAEKINIWQVCTGNLLAVLTRHYQGV 125

Query: 123 TIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQH 182
           T + ++ D +  ++GGED  + VW +  ++   + A G             EP H  S H
Sbjct: 126 TCLSFTDDGSHFLSGGEDNLVLVWPVHSVLSGGSTAVGHS----------LEPRHTLSHH 175

Query: 183 SLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIY 242
           SLPVT +     G ++R  S S D+TCK+F++ +G+ LLS+  D  +T V  D  E   +
Sbjct: 176 SLPVTDLYCGCGGLQARAVSASLDQTCKLFEVSSGQLLLSVSFDVSITSVTMDTAETCFF 235

Query: 243 MGTSEGVIKSFCLRQVPRTRDHHIQDST--SNPDFIGHEKQVTSLSCSITGITLLSSSAD 300
            G + G I    L   P  R+ HI++S   S   F GH KQVT LS S+ G  LLS S D
Sbjct: 236 AGGTNGNIHQVNLYAKPVQRERHIEESEGCSAQIFRGHSKQVTCLSVSMDGGQLLSGSHD 295

Query: 301 ETLKIWHTISRQCLRTIQHKGPVLGAFLGLLPPA 334
            T ++W   S QC++T  HKG V  A L + PP+
Sbjct: 296 HTARLWDIPSMQCIQTFSHKGAVTNAML-IRPPS 328

Source: Branchiostoma floridae

Species: Branchiostoma floridae

Genus: Branchiostoma

Family: Branchiostomidae

Phylum: Chordata

Superkingdom: Eukaryota

>gi|82524836|ref|NP_001032341.1| WD repeat domain 18 [Xenopus (Silurana) tropicalis] gi|89268641|emb|CAJ82427.1| WD repeat domain 18 [Xenopus (Silurana) tropicalis] gi|166796844|gb|AAI59017.1| WD repeat domain 18 [Xenopus (Silurana) tropicalis] gi|166796986|gb|AAI59060.1| WD repeat domain 18 [Xenopus (Silurana) tropicalis] gi|213624258|gb|AAI70854.1| WD repeat domain 18 [Xenopus (Silurana) tropicalis] gi|213626085|gb|AAI70824.1| WD repeat domain 18 [Xenopus (Silurana) tropicalis]

 Score =  223 bits (568), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 119/340 (35%), Positives = 195/340 (57%), Gaps = 18/340 (5%)

Query: 6   EVAFSYDGSGAIS---VWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQA 62
           E+  S D +G ++   VWEP  G++L++Y+G +  S   + +LG  Y+LG + GK  I  
Sbjct: 6   ELVLSADATGQVANCTVWEPVTGSVLLTYRGGNT-SNRGLAVLGGQYLLGAQLGKNYINV 64

Query: 63  WPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPI 122
           W +  +++ Q +++CPG ++ +  SP+  Y+   I   +++W++ +GRLLA  ++HYQ +
Sbjct: 65  WELQRRDQLQQKIVCPGPVNCLATSPNGLYLVSGIAESIYLWEVCTGRLLAILNNHYQDV 124

Query: 123 TIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQH 182
           T + ++ DS+ I++G +D  + VW L  ++  +T       S G       EP +V S+H
Sbjct: 125 TCLTFTDDSSHIISGAKDSLVLVWSLYSVLQVET-------SRGP------EPRYVWSRH 171

Query: 183 SLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIY 242
           SLP+T V     G ++RV + S D+T K++++C+G+ LLS++ D R+  VAFD  E +++
Sbjct: 172 SLPITDVQCGIGGPQARVVTSSLDQTVKLWEICSGDLLLSVLFDVRIMSVAFDPAEYHLF 231

Query: 243 MGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADET 302
            G S+GVI    L   P  R+           F GH  QVT LS S+ G  L+S S DET
Sbjct: 232 CGGSDGVIYQVDLYATPEQRERPFHPEQEMV-FKGHRNQVTCLSVSLDGSMLISGSHDET 290

Query: 303 LKIWHTISRQCLRTIQHKGPVLGAFLGLLPPAIHDYDFTP 342
           + +W   S+QCLRT+ H+GPV   F+   P  I   +  P
Sbjct: 291 VCVWDIHSKQCLRTVAHRGPVTNVFIIPAPGNILRAESKP 330

Source: Xenopus (Silurana) tropicalis

Species: Xenopus (Silurana) tropicalis

Genus: Xenopus

Family: Pipidae

Order: Anura

Class: Amphibia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|91084787|ref|XP_972631.1| PREDICTED: similar to PAF acetylhydrolase 45 kDa subunit, putative [Tribolium castaneum] gi|270008596|gb|EFA05044.1| hypothetical protein TcasGA2_TC015135 [Tribolium castaneum]

 Score =  223 bits (568), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 119/307 (38%), Positives = 182/307 (59%), Gaps = 11/307 (3%)

Query: 18  SVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQE-KAQLRLI 76
           ++W+   G+++  YK   V++P ++ LLG+DY+L  +  KP+   W VNSQE + ++  I
Sbjct: 20  ALWDSSTGSIVHCYKNGGVVAPKTLNLLGDDYLLTSDDAKPITHVWCVNSQEVEKKMSTI 79

Query: 77  CPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVT 136
              +I++M   P + YIA  I TKLH+W + SG+LL+    +YQPIT  K+S D  F+V 
Sbjct: 80  HSEKITAMSVCPQSCYIAAGIGTKLHLWHLPSGKLLSIQKKNYQPITCAKFSNDGAFVVV 139

Query: 137 GGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGA 196
            G+DG + V+ L+ L+   ++       SG    G  EP++ K  HSLP+  + +   G 
Sbjct: 140 SGQDGMLVVYSLASLV---SLHNNFVSQSG----GQVEPIYTKHDHSLPINDLHVGNFGP 192

Query: 197 KSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLR 256
           KSR+A+VS D TCKI+ L TG  LL+LI D+ LT V FDG   ++++G + G I+ F L+
Sbjct: 193 KSRLATVSSDHTCKIYVLSTGTLLLNLIFDSPLTSVIFDGPCWSLFLGHNSGRIQQFYLK 252

Query: 257 QVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRT 316
           + PR  +HH+   + +  F GH K+VT L        L+S S D  + +W   SRQ LR 
Sbjct: 253 EPPRGVEHHV---SGDLVFQGHSKRVTCLDMGAANGVLVSGSDDCFVFVWEIASRQILRR 309

Query: 317 IQHKGPV 323
           I+HKG +
Sbjct: 310 IEHKGAI 316

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|62826031|gb|AAH94198.1| LOC733228 protein [Xenopus laevis]

 Score =  223 bits (568), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 119/330 (36%), Positives = 194/330 (58%), Gaps = 18/330 (5%)

Query: 6   EVAFSYDGSGAIS---VWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQA 62
           E+  S D +G ++   VWEP  G++L++Y+G +  S   + +LG  Y+LG + GK  I  
Sbjct: 5   ELVLSADAAGQVANCTVWEPVTGSVLLTYRGGNT-SHRGLAVLGGQYLLGGQLGKNYINV 63

Query: 63  WPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPI 122
           W +  +++ Q +++CPG ++ + ASP+  Y+   I   +++W++S+G LLA  +SHYQ +
Sbjct: 64  WELQRRDQLQQKIVCPGPVNCLSASPNGLYLVAGIAESIYLWEVSTGHLLAILNSHYQDV 123

Query: 123 TIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQH 182
           T + ++ DS+ I++G +D  + VW L  ++  +T       S G       EP +V S+H
Sbjct: 124 TCLTFTDDSSHIISGAKDSLVLVWGLYSVLQVET-------SRGP------EPRYVWSRH 170

Query: 183 SLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIY 242
           SLP+T V     G ++RVA+ S D+T K++D+C+G+ L+S++ D R+T VAFD  E +++
Sbjct: 171 SLPITDVQCGIGGPQARVATSSLDQTIKLWDICSGDLLVSVLFDVRITSVAFDPAEYHLF 230

Query: 243 MGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADET 302
            G S+GVI    L   P  R+           F GH  QVT LS S+ G  L+S S DET
Sbjct: 231 CGGSDGVIYQVDLYTTPEQRERPFHPEQEMV-FKGHRNQVTCLSVSLDGSMLISGSHDET 289

Query: 303 LKIWHTISRQCLRTIQHKGPVLGAFLGLLP 332
           + +W   S+Q LR++ H+GPV   F+   P
Sbjct: 290 VCVWDIQSKQSLRSVPHRGPVTNVFIIAAP 319

Source: Xenopus laevis

Species: Xenopus laevis

Genus: Xenopus

Family: Pipidae

Order: Anura

Class: Amphibia

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	343
ZFIN|ZDB-GENE-040905-4	431	wdr18 "WD repeat domain 18" [D	0.927	0.737	0.359	6.1e-55
UNIPROTKB|Q9BV38	432	WDR18 "WD repeat-containing pr	0.938	0.745	0.345	4e-51
MGI|MGI:2158400	431	Wdr18 "WD repeat domain 18" [M	0.903	0.719	0.341	7.4e-50
RGD|1310646	431	Wdr18 "WD repeat domain 18" [R	0.900	0.716	0.340	7.4e-50
UNIPROTKB|Q3SZD4	432	WDR18 "WD repeat-containing pr	0.941	0.747	0.337	4.1e-49
DICTYBASE|DDB_G0288659	560	wdr18 "WD40 repeat-containing	0.664	0.407	0.269	9.4e-31
WB|WBGene00004185	529	pro-1 [Caenorhabditis elegans	0.819	0.531	0.259	1.1e-22
POMBASE|SPAC13G7.08c	446	crb3 "WD repeat protein Crb3"	0.787	0.605	0.258	6.3e-18
TAIR|locus:2082891	438	RID3 "AT3G49180" [Arabidopsis	0.641	0.502	0.262	8.2e-15
ASPGD|ASPL0000074691	573	AN4771 [Emericella nidulans (t	0.804	0.481	0.245	1.4e-13

ZFIN|ZDB-GENE-040905-4 wdr18 "WD repeat domain 18" [Danio rerio (taxid:7955)]

 Score = 567 (204.7 bits), Expect = 6.1e-55, P = 6.1e-55
 Identities = 122/339 (35%), Positives = 196/339 (57%)

Query:     1 MSLLNEVAFSYDGSGAI---SVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGK 57
             MS   EV  S D +G +   +V++P  G+  +SY+G +  S  S+ +L  +Y+LG + GK
Sbjct:     1 MSAPVEVVLSADSAGQLFNCAVYDPHTGSEFLSYRGGNT-SSRSLTILNGEYILGAQLGK 59

Query:    58 PMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASS 117
               I  W +  +++ Q +++CPG ++ + ASPD  Y+   I   +++W++S+G LLA  S 
Sbjct:    60 NYINVWEIQRKDQLQQKIVCPGIVTCLCASPDGLYVLAGIAEAIYLWEVSTGNLLAILSR 119

Query:   118 HYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLH 177
             H+Q ++ +K++ DS+  V+GG+D    +W LS ++  Q  +   P           EP H
Sbjct:   120 HFQDLSCIKFTDDSSHFVSGGKDNLAFIWNLSSVV--QLDSSRTP-----------EPRH 166

Query:   178 VKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGT 237
             + S+HSLP+T +    +G ++RVA+ S D+T K++++ +GE LLS++ D  +  V FD  
Sbjct:   167 ILSRHSLPITDIHCGLMGPQARVATASLDQTVKVWEISSGEMLLSVLFDVGIMSVTFDPC 226

Query:   238 EDNIYMGTSEGVIKSFCLRQVPRTRDHHIQ-DSTSNPDFIGHEKQVTSLSCSITGITLLS 296
             E  ++ G S+G I    L     +RD   Q DS  N  F GH   VT LS S+ G  LLS
Sbjct:   227 EYFLFCGGSDGNIFQVSLCSTSLSRDKTFQSDSEGNQVFKGHRNLVTCLSVSMDGTVLLS 286

Query:   297 SSADETLKIWHTISRQCLRTIQHKGPVLGAFLGLLP-PA 334
              S DET+++W   S+QC+ TI H+GPV  A   ++P PA
Sbjct:   287 GSNDETVRMWDVQSKQCIWTINHRGPVTNA--AIIPAPA 323

GO:0070121 "Kupffer's vesicle development" evidence=IMP

GO:0007368 "determination of left/right symmetry" evidence=IGI;IMP

GO:0007275 "multicellular organismal development" evidence=IEA

UNIPROTKB|Q9BV38 WDR18 "WD repeat-containing protein 18" [Homo sapiens (taxid:9606)]

 Score = 531 (192.0 bits), Expect = 4.0e-51, P = 4.0e-51
 Identities = 118/342 (34%), Positives = 185/342 (54%)

Query:     6 EVAFSYDGSGAI---SVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQA 62
             EVA   D +  +    VWE   G  L++Y+G     P  + LL  +Y+L  + GK  I A
Sbjct:     6 EVAVCTDSAAPMWSCIVWELHSGANLLTYRGGQA-GPRGLALLNGEYLLAAQLGKNYISA 64

Query:    63 WPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPI 122
             W +  +++ Q +++CPG ++ + ASP+  Y+   +   +H+W++S+G LL   S HYQ +
Sbjct:    65 WELQRKDQLQQKIMCPGPVTCLTASPNGLYVLAGVAESIHLWEVSTGNLLVILSRHYQDV 124

Query:   123 TIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQH 182
             + ++++ DS+  ++GG+D  + VW L  ++  Q     IP            P HV S H
Sbjct:   125 SCLQFTGDSSHFISGGKDCLVLVWSLCSVL--QADPSRIPA-----------PRHVWSHH 171

Query:   183 SLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIY 242
             +LP+T +     G  +RVA+ S D+T K++++ +GE LLS++ D  +  V  D  E +++
Sbjct:   172 ALPITDLHCGFGGPLARVATSSLDQTVKLWEVSSGELLLSVLFDVSIMAVTMDLAEHHMF 231

Query:   243 MGTSEGVIKSFCLRQVP--RTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSAD 300
              G SEG I    L   P  R R  H +       F GH  QVT LS S  G  LLS S D
Sbjct:   232 CGGSEGSIFQVDLFTWPGQRERSFHPEQDAGKV-FKGHRNQVTCLSVSTDGSVLLSGSHD 290

Query:   301 ETLKIWHTISRQCLRTIQHKGPVLGAFLGLLPPAIHDYDFTP 342
             ET+++W   S+QC+RT+  KGPV  A + L P ++   DF P
Sbjct:   291 ETVRLWDVQSKQCIRTVALKGPVTNAAILLAPVSMLSSDFRP 332

GO:0007275 "multicellular organismal development" evidence=IEA

GO:0005654 "nucleoplasm" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

MGI|MGI:2158400 Wdr18 "WD repeat domain 18" [Mus musculus (taxid:10090)]

 Score = 519 (187.8 bits), Expect = 7.4e-50, P = 7.4e-50
 Identities = 111/325 (34%), Positives = 179/325 (55%)

Query:    19 VWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICP 78
             VWE   G  L++Y+G     P  + LL  +Y+L  ++GK  I AW +  +++ Q +++CP
Sbjct:    22 VWELHSGANLLTYRGGQA-GPRGLALLNGEYLLAAQQGKNYICAWELQRKDQLQQKIMCP 80

Query:    79 GRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGG 138
             G ++ +  +P+  Y+   I   +++W++ +G LL   S HYQ ++ +K++ D +  V+ G
Sbjct:    81 GPVTCLTTAPNGLYVLAGIAESIYLWEVCTGNLLVILSRHYQDVSCLKFTGDGSHFVSAG 140

Query:   139 EDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKS 198
             +D     W L    C  +V    P         +  P HV SQH+LP+T +     G  +
Sbjct:   141 KDCLALAWSL----C--SVLQADPSR-------ILAPRHVWSQHTLPITDLHCGFGGPMA 187

Query:   199 RVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQV 258
             RVA+ S D+T K++ + +G+ LLS++ D  +T V  D  E +I+ G S+G I    L   
Sbjct:   188 RVATASLDQTVKLWAISSGDLLLSVLFDMGITSVTMDLAEHHIFCGGSDGSIFQVDLCSW 247

Query:   259 PRTRDHHIQ-DSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTI 317
             P  R+H  Q +  +   F GH  QVT LS S  G  LLS S DE++++W   S+QCLRT+
Sbjct:   248 PGLREHSFQPEQNTGKVFKGHRNQVTCLSVSTDGSVLLSGSHDESVRLWDVKSKQCLRTV 307

Query:   318 QHKGPVLGAFLGLLPPAIHDYDFTP 342
               KGPV  A + L PP++ + +F P
Sbjct:   308 TLKGPVTNAAIILAPPSMLNPEFRP 332

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=IEA

GO:0008150 "biological_process" evidence=ND

RGD|1310646 Wdr18 "WD repeat domain 18" [Rattus norvegicus (taxid:10116)]

 Score = 519 (187.8 bits), Expect = 7.4e-50, P = 7.4e-50
 Identities = 111/326 (34%), Positives = 180/326 (55%)

Query:    19 VWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICP 78
             VWE   G  L++Y+G     P  + LL  +Y+L  ++GK  I AW +  +++ Q +++CP
Sbjct:    22 VWELHSGANLLTYRGGQA-GPRGLALLNGEYLLAAQQGKNYICAWELQRKDQLQQKIMCP 80

Query:    79 GRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGG 138
             G ++ +  +P+  Y+   I   +++W++S+G LL   S HYQ ++ +K++ D +  V+ G
Sbjct:    81 GPVTCLTTAPNGLYVLAGIAESIYLWEVSTGNLLVILSRHYQDVSCLKFTGDGSHFVSAG 140

Query:   139 EDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKS 198
             +D  +  W L    C  +V    P         +  P HV SQH+LP+T +     G  +
Sbjct:   141 KDCLVLAWSL----C--SVLQADPSR-------ILAPRHVWSQHTLPITDLHCGFGGPMA 187

Query:   199 RVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVI--KSFCLR 256
             RVA+ S D+T K++ + +G+ LLS++ D  +T V  D  E  I+ G S+G I     C R
Sbjct:   188 RVATASLDQTMKLWAISSGDLLLSVLFDMGITSVTMDLAEHYIFCGGSDGSIFQVDLCSR 247

Query:   257 QVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRT 316
               PR +    + +T    F GH  QVT LS S  G  LLS S DE++++W   S+QC+RT
Sbjct:   248 PGPREQSFQPEQNTGKV-FKGHRNQVTCLSVSTDGSILLSGSHDESVRLWDVKSKQCVRT 306

Query:   317 IQHKGPVLGAFLGLLPPAIHDYDFTP 342
             +  KGPV  A + L PP++ + +F P
Sbjct:   307 VPLKGPVTNAAITLAPPSMLNPEFRP 332

GO:0005654 "nucleoplasm" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=IEA

UNIPROTKB|Q3SZD4 WDR18 "WD repeat-containing protein 18" [Bos taurus (taxid:9913)]

 Score = 512 (185.3 bits), Expect = 4.1e-49, P = 4.1e-49
 Identities = 115/341 (33%), Positives = 183/341 (53%)

Query:     6 EVAFSYDGSGAI---SVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQA 62
             EVA   D +  +    VWE   G  L++Y+G     P  + LL  +Y+L  + GK  I A
Sbjct:     6 EVAVCTDSAAQLWSCVVWELHSGANLLTYRGGQA-GPRGLALLNGEYLLAAQLGKNYICA 64

Query:    63 WPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPI 122
             W +  +++ Q +++CPG ++ +  SP+  Y+   I   +++W++S+G LL   S HYQ +
Sbjct:    65 WELQRKDQLQQKIMCPGPVTCLTTSPNGLYVLAGISENIYLWEVSTGNLLVILSRHYQDV 124

Query:   123 TIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQH 182
             + ++++ DS+  ++GG+D  +  W L    C  +V    P  +         P HV S+H
Sbjct:   125 SCLQFTGDSSHFISGGKDCLVLAWSL----C--SVLQADPSRT-------PAPRHVWSRH 171

Query:   183 SLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIY 242
             +LP+T +     G  +RVA+ S D+T K++++ +GE LLS++ D  +  V  D  E  ++
Sbjct:   172 TLPITDLHCGFGGPLARVATASLDQTVKLWEVSSGELLLSVLFDVGILAVTMDLAEHYMF 231

Query:   243 MGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPD-FIGHEKQVTSLSCSITGITLLSSSADE 301
              G S+G I    L   P  R+   Q    +   F GH  QVT LS S  G  LLS S DE
Sbjct:   232 CGGSDGSIFQVDLCTWPGQREKSFQPEQEHGKVFRGHRNQVTCLSVSTDGSVLLSGSHDE 291

Query:   302 TLKIWHTISRQCLRTIQHKGPVLGAFLGLLPPAIHDYDFTP 342
             T+++W   S+QCLRT+  KGPV  A + L P ++   DF P
Sbjct:   292 TVRLWDVQSQQCLRTVTLKGPVTNACIMLAPVSMLSSDFRP 332

GO:0005737 "cytoplasm" evidence=IEA

GO:0005654 "nucleoplasm" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=IEA

DICTYBASE|DDB_G0288659 wdr18 "WD40 repeat-containing protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 263 (97.6 bits), Expect = 9.4e-31, Sum P(2) = 9.4e-31
 Identities = 66/245 (26%), Positives = 116/245 (47%)

Query:     7 VAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVN 66
             +A +     ++ +++ + G L+ ++   +    +  C +G++Y    +  K MI  +   
Sbjct:    43 IAITSKEDSSLFIYDLRNGNLIATFNNTNN-DTNGFCTIGSEYFATSQANKAMINIYNWK 101

Query:    67 SQEKAQLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIV 125
               +      I   +   +  S D  Y+ + S    +++W++S+G LL    +HY  I+ +
Sbjct:   102 KDQPIYKTPI-QEKSGPICCSSDGNYLVMGSASGMVYLWEVSTGTLLRMWEAHYNKISCI 160

Query:   126 KWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLP 185
              ++ D  +I+T G+DG I  W   + + +                 L    +  S HSL 
Sbjct:   161 TFTKDDFYIITAGDDGIINCWSFEQCLDRDV--------------SLLRARNSFSDHSLG 206

Query:   186 VTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGT 245
             +T +  S  G  SR+ SVS DRTCKI+DL TG  + S+I  T LT V  D TE   Y+G 
Sbjct:   207 ITSIVCSFGGCNSRLFSVSLDRTCKIWDLVTGRCINSIIFPTYLTSVCLDSTETTCYVGG 266

Query:   246 SEGVI 250
              +G+I
Sbjct:   267 GDGII 271

GO:0008150 "biological_process" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

WB|WBGene00004185 pro-1 [Caenorhabditis elegans (taxid:6239)]

 Score = 269 (99.8 bits), Expect = 1.1e-22, P = 1.1e-22
 Identities = 79/304 (25%), Positives = 142/304 (46%)

Query:    21 EPKGGTLLMSYKGASVLSPHSMCL--LGND--YVLGVEKGKPMIQAWPVNSQEKAQLRLI 76
             +P+ G    SYKG+ +    +  +  LG+D  +V+   K +P++    V+ +++   + +
Sbjct:    36 DPRTGVSSWSYKGSELQGASTGLVEPLGHDGEHVVITTKERPLVHVLAVHPKDRFHQKCV 95

Query:    77 CPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVT 136
              PG +S++ +     ++ +SI+ +L+ W +S+G LL+   +HYQ IT +  S D + I T
Sbjct:    96 LPGPVSAIVSDNSGHFVFMSIKRQLYCWLLSTGELLSVIDAHYQNITKIVISDDDSMIFT 155

Query:   137 GGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGA 196
               +DG +  + ++ L+           S+ +  T    P    + H+L ++ + ++  G+
Sbjct:   156 ASKDGAVHGYLVTDLV-----------SADRDHT--VAPFRKWASHTLSISDLKITN-GS 201

Query:   197 KSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLR 256
               RV S   D    +  +     +L    D  LT  A D  E  I++GT  G I    L 
Sbjct:   202 NPRVLSAGADHIACLHSISMDSVILKASSDRPLTACAIDPAETRIFIGTEVGNIAQINLF 261

Query:   257 QV-PRTRDHHIQDSTS-NPDFI---GHEKQVTSLSCSITGITLLSSSADETLKIWHTISR 311
             Q+ P  RD  +Q     N  F    GH  +++ L+ +  G  L S  A     IW   S 
Sbjct:   262 QLAPEERDLLVQAGDEHNTKFRVLNGHSDEISRLAINTDGTLLASGDASGKYCIWEISSH 321

Query:   312 QCLR 315
             QCL+
Sbjct:   322 QCLK 325

GO:0040010 "positive regulation of growth rate" evidence=IMP

GO:0000003 "reproduction" evidence=IMP

GO:0040007 "growth" evidence=IMP

GO:0002119 "nematode larval development" evidence=IMP

GO:0016477 "cell migration" evidence=IMP

GO:0008406 "gonad development" evidence=IMP

GO:0040035 "hermaphrodite genitalia development" evidence=IMP

GO:0007276 "gamete generation" evidence=IMP

GO:0006898 "receptor-mediated endocytosis" evidence=IMP

GO:0006364 "rRNA processing" evidence=IGI;IMP

GO:0007281 "germ cell development" evidence=IMP

GO:0005654 "nucleoplasm" evidence=ISS

POMBASE|SPAC13G7.08c crb3 "WD repeat protein Crb3" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 236 (88.1 bits), Expect = 6.3e-18, P = 6.3e-18
 Identities = 77/298 (25%), Positives = 143/298 (47%)

Query:    25 GTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSM 84
             GTL+ +++ +S  + ++ C   N ++L  +  +P +       +   Q  +I P  +  +
Sbjct:    26 GTLVSTFRQSSP-AKNATCTTLN-HLLSAQHTRPQLNIHNFGKEILDQ-SIILPEILICV 82

Query:    85 QASPDAAYIAVSIET-KLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTI 143
             Q+SP  +++A   E   L++W + SG L+    +HYQP+TI+K+S D   + T   DG +
Sbjct:    83 QSSPCGSWLAAGTEKGNLYIWSLKSGALIYFFRAHYQPLTILKFSNDGMVLFTASNDGDV 142

Query:   144 CVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASV 203
               W +S L+  Q   F    SS K ++  +   H +S  S+ +    +       R+ + 
Sbjct:   143 FAWLISTLV-DQNSTFETSNSSVKAISHFSG--HKRSIVSMEIGPGPI----VSGRLYTA 195

Query:   204 SHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVI-------KSFCLR 256
             S D T +I+D+ TG  L ++ L +  +C+  D +E  +Y+G  +G+I        S    
Sbjct:   196 SEDNTIRIWDVSTGNLLTTIALPSTPSCMTVDPSERVVYVGNEKGIIWIPLYTGSSTFSN 255

Query:   257 QVPRTRDHHIQDSTSNPDFIG---------HEKQVTSLSCSITGITLLSSSADETLKI 305
              V   +     D+T+ P+ IG           ++ + +SC  + IT L+ S D +L I
Sbjct:   256 NVKEKKRVTSVDNTTIPNAIGGMGRVVDYNDSRESSIISCQ-SPITTLTVSFDASLLI 312

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISO;IDA

GO:0005720 "nuclear heterochromatin" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0006364 "rRNA processing" evidence=ISO

GO:0030702 "chromatin silencing at centromere" evidence=IMP

GO:0032153 "cell division site" evidence=IDA

GO:0044732 "mitotic spindle pole body" evidence=IDA

GO:0097344 "Rix1 complex" evidence=IDA

TAIR|locus:2082891 RID3 "AT3G49180" [Arabidopsis thaliana (taxid:3702)]

 Score = 211 (79.3 bits), Expect = 8.2e-15, P = 8.2e-15
 Identities = 63/240 (26%), Positives = 117/240 (48%)

Query:    17 ISVWEPKGGTLLMSYKGASVLSP-HSMCLLGNDYV----LGVEKGKPMIQAWPVNSQEKA 71
             I  W+ K GT  + +K  +  SP H +  +G  ++    L        I  W   ++ +A
Sbjct:    15 IGSWDLKTGTEQLQFKPCA--SPAHGLTAVGEKFLASSQLSARNTSGSIFYWSW-TKPQA 71

Query:    72 QLRLICPGRISSMQASPDAAY-IAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSAD 130
             +++      I ++ A+ +  Y +   I   +++W++++G+LL     HY+ +T + +S D
Sbjct:    72 EVKSYPVEPIKALAANNEGTYLVGGGISGDIYLWEVATGKLLKKWHGHYRSVTCLVFSGD 131

Query:   131 SNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVT 190
              + +V+G +DG+I VW L RL       F       +G T L E  H  ++H++ VT + 
Sbjct:   132 DSLLVSGSQDGSIRVWSLIRLFDD----F----QRQQGNT-LYE--HNFNEHTMSVTDIV 180

Query:   191 LSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVI 250
             +   G  + + S S DRTCK++ L  G+ L ++I  + +  +A D      Y G  +  I
Sbjct:   181 IDYGGCNAVIISSSEDRTCKVWSLSRGKLLKNIIFPSVINALALDPGGCVFYAGARDSKI 240

GO:0000166 "nucleotide binding" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0005834 "heterotrimeric G-protein complex" evidence=ISS

GO:0008150 "biological_process" evidence=ND

GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=ISS

ASPGD|ASPL0000074691 AN4771 [Emericella nidulans (taxid:162425)]

 Score = 203 (76.5 bits), Expect = 1.4e-13, P = 1.4e-13
 Identities = 77/314 (24%), Positives = 137/314 (43%)

Query:    26 TLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKA--QLRLICPGRISS 83
             TL  ++K +S  SP+ + +  + +V   +  K  +  +   S+EK   +  +  P RI S
Sbjct:    37 TLRSTFKKSST-SPNCLAVSAS-HVFAAQAEKATVHVY---SREKGNQEATVPFPERIRS 91

Query:    84 MQA--SPDAAYIAVSIET-KLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGED 140
             +    S +   + +  E  +L +W++ +GR +AT +SH +P+T V     SNFI++G  D
Sbjct:    92 IAVAGSKNGDIVVLGTEGGRLILWEVCTGRQVATTASHLRPVTSVVVDPSSNFILSGSSD 151

Query:   141 GTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRV 200
              ++ VW L  L+     +F  P  SG+       P+   S H   V+ + +     +  +
Sbjct:   152 ASVHVWSLVDLL-----SFTKP-PSGRNQQPPNSPIRTFSNHRAAVSAIVVGHSTGRYNI 205

Query:   201 A-SVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVP 259
             A S + D T  ++D  TG  L + +L      +A D  +   Y G  +G ++S       
Sbjct:   206 AISAAQDNTAIVWDYRTGHVLRNFLLPASAISLALDPVDRAFYAGYEDGSVQSLDFY--- 262

Query:   260 RTRDHHIQDSTSNPDFIGHEKQVTS----------------LSCSITGITLLSSSADETL 303
               ++  IQ    NP       Q +S                L+ S  G+TLLS   +  +
Sbjct:   263 --KEQSIQHPLHNPSLQATPAQASSEDRWLPPSADSGAAHALTLSYDGMTLLSGHENGKV 320

Query:   304 KIWHTISRQCLRTI 317
               W+   R+   T+
Sbjct:   321 YSWNVGRRKYASTV 334

GO:0000027 "ribosomal large subunit assembly" evidence=IEA

GO:0006364 "rRNA processing" evidence=IEA

GO:0030702 "chromatin silencing at centromere" evidence=IEA

GO:0005654 "nucleoplasm" evidence=IEA

GO:0044732 "mitotic spindle pole body" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0097344 "Rix1 complex" evidence=IEA

GO:0032153 "cell division site" evidence=IEA

GO:0005720 "nuclear heterochromatin" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q499N3	WDR18_RAT	No assigned EC number	0.3312	0.9008	0.7169	yes	N/A
Q9BV38	WDR18_HUMAN	No assigned EC number	0.3381	0.9562	0.7592	yes	N/A
Q68EI0	WDR18_DANRE	No assigned EC number	0.3526	0.9562	0.7610	yes	N/A
Q4VBE8	WDR18_MOUSE	No assigned EC number	0.3323	0.9037	0.7192	yes	N/A
Q3SZD4	WDR18_BOVIN	No assigned EC number	0.3343	0.9416	0.7476	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	343
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	8e-22
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	3e-21
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	4e-20
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	9e-19
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	3e-15
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	4e-15
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	2e-10
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	3e-10
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	2e-08
smart00320	40	smart00320, WD40, WD40 repeats	3e-07
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	6e-07
pfam00400	39	pfam00400, WD40, WD domain, G-beta repeat	3e-06
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	4e-05
pfam00400	39	pfam00400, WD40, WD domain, G-beta repeat	5e-04
smart00320	40	smart00320, WD40, WD40 repeats	0.004

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 93.2 bits (232), Expect = 8e-22
 Identities = 69/250 (27%), Positives = 111/250 (44%), Gaps = 40/250 (16%)

Query: 78  PGRISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVT 136
            G ++ +  SPD   +A  S +  + +W + +G LL T   H  P+  V  SAD  ++ +
Sbjct: 9   TGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLAS 68

Query: 137 GGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGA 196
           G  D TI +W L    C +T+                        H+  V+ V  S  G 
Sbjct: 69  GSSDKTIRLWDLETGECVRTLT----------------------GHTSYVSSVAFSPDG- 105

Query: 197 KSRVASVSHDRTCKIFDLCTGEDLLSL--ILDTRLTCVAFDGTEDNIYMGTSEGVIKSFC 254
              ++S S D+T K++D+ TG+ L +L    D  +  VAF      +   + +G IK + 
Sbjct: 106 -RILSSSSRDKTIKVWDVETGKCLTTLRGHTDW-VNSVAFSPDGTFVASSSQDGTIKLWD 163

Query: 255 LRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCL 314
           LR                    GH  +V S++ S  G  LLSSS+D T+K+W   + +CL
Sbjct: 164 LRTGKCVA-----------TLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCL 212

Query: 315 RTIQ-HKGPV 323
            T++ H+  V
Sbjct: 213 GTLRGHENGV 222

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 91.6 bits (228), Expect = 3e-21
 Identities = 85/311 (27%), Positives = 127/311 (40%), Gaps = 48/311 (15%)

Query: 7   VAFSYDGS--------GAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKP 58
           VAFS DG         G I VW+ + G LL + KG +             Y+      K 
Sbjct: 15  VAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLASGSSDK- 73

Query: 59  MIQAWPVNSQEKAQLRLIC-PGRISSMQASPDAAYIAVSIE-TKLHMWQISSGRLLATAS 116
            I+ W + + E  +  L      +SS+  SPD   ++ S     + +W + +G+ L T  
Sbjct: 74  TIRLWDLETGECVR-TLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLR 132

Query: 117 SHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPL 176
            H   +  V +S D  F+ +  +DGTI +W L    C  T    + G             
Sbjct: 133 GHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVAT----LTG------------- 175

Query: 177 HVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDT-RLTCVAFD 235
                H+  V  V  S  G   ++ S S D T K++DL TG+ L +L      +  VAF 
Sbjct: 176 -----HTGEVNSVAFSPDG--EKLLSSSSDGTIKLWDLSTGKCLGTLRGHENGVNSVAFS 228

Query: 236 GTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLL 295
                +  G+ +G I+ + LR         +          GH   VTSL+ S  G  L 
Sbjct: 229 PDGYLLASGSEDGTIRVWDLR--TGECVQTLS---------GHTNSVTSLAWSPDGKRLA 277

Query: 296 SSSADETLKIW 306
           S SAD T++IW
Sbjct: 278 SGSADGTIRIW 288

Length = 289

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 90.5 bits (223), Expect = 4e-20
 Identities = 83/343 (24%), Positives = 139/343 (40%), Gaps = 52/343 (15%)

Query: 2   SLLNEVAFSYDGS--------GAISVWEPKGGTL----LMSYKGASVLSPHSMCLLGNDY 49
             +  +AFS DG         G I +W+   G      L     +SV         GN  
Sbjct: 66  DSITSIAFSPDGELLLSGSSDGTIKLWDLDNGEKLIKSLEGLHDSSVSKLALSSPDGNSI 125

Query: 50  VLGVEKGKPMIQAWPVNSQEKAQLRLIC-PGRISSMQASPDAAYIAVSIETK--LHMWQI 106
           +L        ++ W +++  K    L      ++S+  SPD   +A        + +W +
Sbjct: 126 LLASSSLDGTVKLWDLSTPGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDL 185

Query: 107 SSGRLLATASSHYQPITIVKWSADSNF-IVTGGEDGTICVWQLSRLICKQTVAFGIPGSS 165
            +G+ L+T + H  P++ + +S D    I +G  DGTI +W LS     ++   G     
Sbjct: 186 RTGKPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGKLLRSTLSG----- 240

Query: 166 GKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLIL 225
                      H  S  S      + S  G  S +AS S D T +++DL +   LL  + 
Sbjct: 241 -----------HSDSVVS------SFSPDG--SLLASGSSDGTIRLWDLRSSSSLLRTLS 281

Query: 226 --DTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVT 283
              + +  VAF      +  G+S+G ++ + L               S+    GHE  V+
Sbjct: 282 GHSSSVLSVAFSPDGKLLASGSSDGTVRLWDLET---------GKLLSSLTLKGHEGPVS 332

Query: 284 SLSCSITGITLLSS-SADETLKIWHTISRQCLRTIQHKGPVLG 325
           SLS S  G  L+S  S D T+++W   + + L+T++    VL 
Sbjct: 333 SLSFSPDGSLLVSGGSDDGTIRLWDLRTGKPLKTLEGHSNVLS 375

Length = 466

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 84.7 bits (210), Expect = 9e-19
 Identities = 63/246 (25%), Positives = 104/246 (42%), Gaps = 38/246 (15%)

Query: 81  ISSMQASPDAAYIA-VSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGE 139
           +  + AS D  Y+A  S +  + +W + +G  + T + H   ++ V +S D   + +   
Sbjct: 54  VRDVAASADGTYLASGSSDKTIRLWDLETGECVRTLTGHTSYVSSVAFSPDGRILSSSSR 113

Query: 140 DGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSR 199
           D TI VW +    C  T    + G                  H+  V  V  S     + 
Sbjct: 114 DKTIKVWDVETGKCLTT----LRG------------------HTDWVNSVAFS--PDGTF 149

Query: 200 VASVSHDRTCKIFDLCTGEDLLSLILDTR-LTCVAFDGTEDNIYMGTSEGVIKSFCLRQV 258
           VAS S D T K++DL TG+ + +L   T  +  VAF    + +   +S+G IK + L   
Sbjct: 150 VASSSQDGTIKLWDLRTGKCVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLST- 208

Query: 259 PRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ 318
                  +          GHE  V S++ S  G  L S S D T+++W   + +C++T+ 
Sbjct: 209 ----GKCLGT------LRGHENGVNSVAFSPDGYLLASGSEDGTIRVWDLRTGECVQTLS 258

Query: 319 -HKGPV 323
            H   V
Sbjct: 259 GHTNSV 264

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 74.7 bits (184), Expect = 3e-15
 Identities = 55/214 (25%), Positives = 77/214 (35%), Gaps = 77/214 (35%)

Query: 111 LLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVT 170
           L  T   H   +T V +S D   + TG  DGTI VW L      +T          KG  
Sbjct: 1   LRRTLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRT---------LKG-- 49

Query: 171 GLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLT 230
                      H+ PV  V  S     + +AS S D+T +++DL TGE            
Sbjct: 50  -----------HTGPVRDVAAS--ADGTYLASGSSDKTIRLWDLETGE------------ 84

Query: 231 CVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSIT 290
                                  C+R                    GH   V+S++ S  
Sbjct: 85  -----------------------CVRT-----------------LTGHTSYVSSVAFSPD 104

Query: 291 GITLLSSSADETLKIWHTISRQCLRTIQ-HKGPV 323
           G  L SSS D+T+K+W   + +CL T++ H   V
Sbjct: 105 GRILSSSSRDKTIKVWDVETGKCLTTLRGHTDWV 138

Length = 289

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 75.9 bits (185), Expect = 4e-15
 Identities = 68/304 (22%), Positives = 124/304 (40%), Gaps = 36/304 (11%)

Query: 7   VAFSYDGSGAISVWEPKGGTLLMSYKGAS-VLSPHSMCLLGNDYVLGVEKGKPMIQAWPV 65
           +A      G I +W+ + G  L +  G +  +S  +    G   +         I+ W +
Sbjct: 170 LASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDG-TIRLWDL 228

Query: 66  NSQEKAQLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGR-LLATASSHYQPIT 123
           ++ +  +  L           SPD + +A  S +  + +W + S   LL T S H   + 
Sbjct: 229 STGKLLRSTLSGHSDSVVSSFSPDGSLLASGSSDGTIRLWDLRSSSSLLRTLSGHSSSVL 288

Query: 124 IVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHS 183
            V +S D   + +G  DGT+ +W L                     TG          H 
Sbjct: 289 SVAFSPDGKLLASGSSDGTVRLWDLE--------------------TGKLLSSLTLKGHE 328

Query: 184 LPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYM 243
            PV+ ++ S  G+   V+  S D T +++DL TG+ L +L   + +  V+F      +  
Sbjct: 329 GPVSSLSFSPDGSLL-VSGGSDDGTIRLWDLRTGKPLKTLEGHSNVLSVSFSPDGRVVSS 387

Query: 244 GTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETL 303
           G+++G ++ +            +   +   +  GH  +VTSL  S  G +L S S+D T+
Sbjct: 388 GSTDGTVRLW-----------DLSTGSLLRNLDGHTSRVTSLDFSPDGKSLASGSSDNTI 436

Query: 304 KIWH 307
           ++W 
Sbjct: 437 RLWD 440

Length = 466

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 61.6 bits (148), Expect = 2e-10
 Identities = 67/309 (21%), Positives = 113/309 (36%), Gaps = 52/309 (16%)

Query: 12  DGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLG------NDYVLGVEKGKPMIQAWPV 65
              G + +W+          K    L  HS  +           +         I+ W +
Sbjct: 131 SLDGTVKLWDLST-----PGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDL 185

Query: 66  NSQEKAQLRLICPGRISSMQASPDAAYIAVSIE--TKLHMWQISSGRLLATASSHYQPIT 123
            + +           +SS+  SPD   +  S      + +W +S+G+LL +  S +    
Sbjct: 186 RTGKPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGKLLRSTLSGHSDSV 245

Query: 124 IVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHS 183
           +  +S D + + +G  DGTI +W L                        +  L   S HS
Sbjct: 246 VSSFSPDGSLLASGSSDGTIRLWDLR---------------------SSSSLLRTLSGHS 284

Query: 184 LPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDT---RLTCVAFDGTEDN 240
             V  V  S  G    +AS S D T +++DL TG+ L SL L      ++ ++F      
Sbjct: 285 SSVLSVAFSPDG--KLLASGSSDGTVRLWDLETGKLLSSLTLKGHEGPVSSLSFSPDGSL 342

Query: 241 IYMGTSE-GVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSA 299
           +  G S+ G I+ + LR     +             +     V S+S S  G  + S S 
Sbjct: 343 LVSGGSDDGTIRLWDLRTGKPLK------------TLEGHSNVLSVSFSPDGRVVSSGST 390

Query: 300 DETLKIWHT 308
           D T+++W  
Sbjct: 391 DGTVRLWDL 399

Length = 466

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 60.0 bits (146), Expect = 3e-10
 Identities = 52/209 (24%), Positives = 85/209 (40%), Gaps = 36/209 (17%)

Query: 10  SYDGSGAISVWEPKGGTLLMSYKG----ASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPV 65
           S D +  I VW+ + G  L + +G     + ++          +V    +    I+ W +
Sbjct: 112 SRDKT--IKVWDVETGKCLTTLRGHTDWVNSVAFSP----DGTFVASSSQDG-TIKLWDL 164

Query: 66  NSQEKAQLRLICPGRISSMQASPDAAYIAVSIETK-LHMWQISSGRLLATASSHYQPITI 124
            + +         G ++S+  SPD   +  S     + +W +S+G+ L T   H   +  
Sbjct: 165 RTGKCVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGHENGVNS 224

Query: 125 VKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSL 184
           V +S D   + +G EDGTI VW L    C QT+                      S H+ 
Sbjct: 225 VAFSPDGYLLASGSEDGTIRVWDLRTGECVQTL----------------------SGHTN 262

Query: 185 PVTHVTLSKLGAKSRVASVSHDRTCKIFD 213
            VT +  S  G   R+AS S D T +I+D
Sbjct: 263 SVTSLAWSPDG--KRLASGSADGTIRIWD 289

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 54.3 bits (131), Expect = 2e-08
 Identities = 32/146 (21%), Positives = 60/146 (41%), Gaps = 6/146 (4%)

Query: 5   NEVAFSYDGSGAISVWEPKGGTLLMSYKG--ASVLSPHSMCLLGNDYVLGVEKGKPMIQA 62
                S    G I +W+ + G  + +  G    V   +S+    +   L        I+ 
Sbjct: 147 GTFVASSSQDGTIKLWDLRTGKCVATLTGHTGEV---NSVAFSPDGEKLLSSSSDGTIKL 203

Query: 63  WPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQP 121
           W +++ +           ++S+  SPD   +A  S +  + +W + +G  + T S H   
Sbjct: 204 WDLSTGKCLGTLRGHENGVNSVAFSPDGYLLASGSEDGTIRVWDLRTGECVQTLSGHTNS 263

Query: 122 ITIVKWSADSNFIVTGGEDGTICVWQ 147
           +T + WS D   + +G  DGTI +W 
Sbjct: 264 VTSLAWSPDGKRLASGSADGTIRIWD 289

Length = 289

>gnl|CDD|197651 smart00320, WD40, WD40 repeats

 Score = 45.8 bits (109), Expect = 3e-07
 Identities = 17/39 (43%), Positives = 24/39 (61%)

Query: 108 SGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVW 146
           SG LL T   H  P+T V +S D  ++ +G +DGTI +W
Sbjct: 1   SGELLKTLKGHTGPVTSVAFSPDGKYLASGSDDGTIKLW 39

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 50.5 bits (119), Expect = 6e-07
 Identities = 62/239 (25%), Positives = 90/239 (37%), Gaps = 42/239 (17%)

Query: 117 SHYQPITIVKWSADSNFIVTGGEDGTICVWQL------------SRLICKQTVAFGIP-- 162
            H   IT + +S D   +++G  DGTI +W L                    +A   P  
Sbjct: 63  GHEDSITSIAFSPDGELLLSGSSDGTIKLWDLDNGEKLIKSLEGLHDSSVSKLALSSPDG 122

Query: 163 ------GSSGKG------VTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCK 210
                  SS  G      ++   + +     HS  VT +  S  G K   +  S D T K
Sbjct: 123 NSILLASSSLDGTVKLWDLSTPGKLIRTLEGHSESVTSLAFSPDG-KLLASGSSLDGTIK 181

Query: 211 IFDLCTGEDLLSLILDTR-LTCVAFDGTEDNIYMGTSE-GVIKSFCLRQVPRTRDHHIQD 268
           ++DL TG+ L +L   T  ++ +AF      +    S  G I+ + L      R      
Sbjct: 182 LWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGKLLR------ 235

Query: 269 STSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTIS-RQCLRTIQ-HKGPVLG 325
                   GH   V S S S  G  L S S+D T+++W   S    LRT+  H   VL 
Sbjct: 236 ----STLSGHSDSVVS-SFSPDGSLLASGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLS 289

Length = 466

>gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat

 Score = 43.1 bits (102), Expect = 3e-06
 Identities = 17/38 (44%), Positives = 24/38 (63%)

Query: 109 GRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVW 146
           G+LL T   H  P+T V +S D N + +G +DGT+ VW
Sbjct: 1   GKLLRTLKGHTGPVTSVAFSPDGNLLASGSDDGTVRVW 38

Length = 39

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 45.1 bits (105), Expect = 4e-05
 Identities = 37/166 (22%), Positives = 65/166 (39%), Gaps = 12/166 (7%)

Query: 4   LNEVAFSYDGS--------GAISVWEPKGGTLLMSYKGASVLSP--HSMCLLGNDYVLGV 53
           +  VAFS DG         G + +W+ + G LL S        P            ++  
Sbjct: 287 VLSVAFSPDGKLLASGSSDGTVRLWDLETGKLLSSLTLKGHEGPVSSLSFSPDGSLLVSG 346

Query: 54  EKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIA-VSIETKLHMWQISSGRLL 112
                 I+ W + +  K    L     + S+  SPD   ++  S +  + +W +S+G LL
Sbjct: 347 GSDDGTIRLWDLRT-GKPLKTLEGHSNVLSVSFSPDGRVVSSGSTDGTVRLWDLSTGSLL 405

Query: 113 ATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVA 158
                H   +T + +S D   + +G  D TI +W L   +   + +
Sbjct: 406 RNLDGHTSRVTSLDFSPDGKSLASGSSDNTIRLWDLKTSLKSVSFS 451

Length = 466

>gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat

 Score = 36.9 bits (86), Expect = 5e-04
 Identities = 13/33 (39%), Positives = 18/33 (54%)

Query: 275 FIGHEKQVTSLSCSITGITLLSSSADETLKIWH 307
             GH   VTS++ S  G  L S S D T+++W 
Sbjct: 7   LKGHTGPVTSVAFSPDGNLLASGSDDGTVRVWD 39

Length = 39

>gnl|CDD|197651 smart00320, WD40, WD40 repeats

 Score = 34.2 bits (79), Expect = 0.004
 Identities = 14/33 (42%), Positives = 18/33 (54%)

Query: 275 FIGHEKQVTSLSCSITGITLLSSSADETLKIWH 307
             GH   VTS++ S  G  L S S D T+K+W 
Sbjct: 8   LKGHTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	343
KOG0271|consensus	480		100.0
KOG0271|consensus	480		100.0
KOG0272|consensus	459		100.0
KOG0272|consensus	459		100.0
KOG0315|consensus	311		100.0
KOG0286|consensus	343		100.0
KOG0286|consensus	343		100.0
KOG0279|consensus	315		100.0
KOG0279|consensus	315		100.0
KOG0315|consensus	311		100.0
KOG0318|consensus	603		100.0
KOG0263|consensus	707		100.0
KOG0295|consensus	406		100.0
KOG0284|consensus	464		100.0
KOG0295|consensus	406		100.0
KOG0273|consensus	524		100.0
KOG0284|consensus	464		100.0
KOG0316|consensus	307		100.0
KOG0296|consensus	399		100.0
KOG0265|consensus	338		100.0
KOG0319|consensus	775		100.0
KOG0291|consensus	893		100.0
KOG0266|consensus	456		100.0
KOG0291|consensus	893		100.0
KOG0285|consensus	460		100.0
KOG0318|consensus	603		100.0
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	100.0
KOG0273|consensus	524		100.0
KOG0645|consensus	312		100.0
KOG0285|consensus	460		100.0
KOG0319|consensus	775		100.0
KOG0281|consensus	499		100.0
KOG0276|consensus	794		100.0
KOG0645|consensus	312		100.0
KOG0263|consensus	707		100.0
KOG0266|consensus	456		100.0
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	100.0
KOG0292|consensus	1202		100.0
KOG0292|consensus	1202		100.0
KOG0282|consensus	503		100.0
KOG0646|consensus	476		100.0
KOG0276|consensus	794		100.0
PLN00181	793	protein SPA1-RELATED; Provisional	100.0
KOG0310|consensus	487		100.0
KOG0643|consensus	327		100.0
KOG0282|consensus	503		100.0
KOG0281|consensus	499		100.0
KOG0265|consensus	338		100.0
KOG0306|consensus	888		100.0
KOG0293|consensus	519		100.0
KOG0278|consensus	334		100.0
PLN00181	793	protein SPA1-RELATED; Provisional	100.0
KOG1446|consensus	311		100.0
KOG0313|consensus	423		100.0
KOG0305|consensus	484		100.0
KOG1407|consensus	313		100.0
KOG0296|consensus	399		100.0
KOG0306|consensus	888		100.0
KOG0278|consensus	334		100.0
KOG0288|consensus	459		100.0
KOG0313|consensus	423		100.0
KOG0316|consensus	307		100.0
KOG0299|consensus	479		100.0
KOG0275|consensus	508		100.0
KOG0277|consensus	311		100.0
KOG0275|consensus	508		100.0
KOG0274|consensus	537		100.0
KOG1539|consensus	910		100.0
KOG0310|consensus	487		100.0
PTZ00421	493	coronin; Provisional	100.0
KOG0283|consensus	712		100.0
KOG0647|consensus	347		100.0
KOG0289|consensus	506		100.0
KOG0277|consensus	311		100.0
KOG0268|consensus	433		100.0
KOG0293|consensus	519		100.0
KOG0643|consensus	327		100.0
KOG0973|consensus	942		100.0
KOG1036|consensus	323		100.0
PTZ00420	568	coronin; Provisional	100.0
KOG0772|consensus	641		100.0
KOG0640|consensus	430		100.0
KOG0300|consensus	481		100.0
KOG0294|consensus	362		100.0
KOG2106|consensus	626		100.0
PTZ00421	493	coronin; Provisional	100.0
TIGR03866	300	PQQ_ABC_repeats PQQ-dependent catabolism-associate	100.0
KOG0283|consensus	712		100.0
KOG0289|consensus	506		100.0
PTZ00420	568	coronin; Provisional	100.0
KOG0288|consensus	459		100.0
KOG0274|consensus	537		100.0
KOG0973|consensus	942		100.0
KOG0640|consensus	430		100.0
KOG0641|consensus	350		100.0
KOG0305|consensus	484		100.0
KOG1446|consensus	311		100.0
KOG0268|consensus	433		100.0
KOG1407|consensus	313		100.0
KOG2096|consensus	420		100.0
KOG0639|consensus	705		100.0
KOG0308|consensus	735		100.0
KOG1408|consensus	1080		100.0
KOG0299|consensus	479		100.0
KOG0300|consensus	481		100.0
KOG0308|consensus	735		100.0
KOG0641|consensus	350		99.98
KOG0772|consensus	641		99.98
KOG0264|consensus	422		99.98
KOG1408|consensus	1080		99.98
KOG1274|consensus	933		99.97
KOG0301|consensus	745		99.97
KOG0301|consensus	745		99.97
KOG0264|consensus	422		99.97
KOG2048|consensus	691		99.97
KOG1063|consensus	764		99.97
KOG0647|consensus	347		99.97
KOG0639|consensus	705		99.97
KOG1539|consensus	910		99.97
KOG0267|consensus	825		99.97
KOG1332|consensus	299		99.97
TIGR03866	300	PQQ_ABC_repeats PQQ-dependent catabolism-associate	99.97
KOG2055|consensus	514		99.97
KOG1332|consensus	299		99.97
KOG1036|consensus	323		99.97
KOG2106|consensus	626		99.97
KOG2048|consensus	691		99.97
KOG4328|consensus	498		99.96
KOG0294|consensus	362		99.96
KOG0321|consensus	720		99.96
KOG4378|consensus	673		99.96
KOG1274|consensus	933		99.96
KOG4283|consensus	397		99.96
KOG0267|consensus	825		99.96
KOG2055|consensus	514		99.96
KOG1273|consensus	405		99.96
KOG0646|consensus	476		99.96
KOG0269|consensus	839		99.96
KOG4283|consensus	397		99.96
KOG0302|consensus	440		99.96
KOG2919|consensus	406		99.96
KOG2445|consensus	361		99.96
KOG0321|consensus	720		99.95
KOG1063|consensus	764		99.95
KOG2096|consensus	420		99.95
KOG4378|consensus	673		99.95
KOG0269|consensus	839		99.95
KOG1034|consensus	385		99.95
KOG0650|consensus	733		99.95
KOG2445|consensus	361		99.95
KOG0650|consensus	733		99.95
KOG0302|consensus	440		99.95
KOG0307|consensus	1049		99.95
KOG1538|consensus	1081		99.94
KOG1445|consensus	1012		99.94
KOG1009|consensus	434		99.94
KOG2919|consensus	406		99.94
KOG1007|consensus	370		99.94
KOG1188|consensus	376		99.94
KOG1007|consensus	370		99.94
KOG1445|consensus	1012		99.94
KOG1034|consensus	385		99.93
KOG0270|consensus	463		99.93
KOG4328|consensus	498		99.93
KOG0270|consensus	463		99.93
KOG1273|consensus	405		99.93
KOG1009|consensus	434		99.93
COG2319	466	FOG: WD40 repeat [General function prediction only	99.92
KOG1538|consensus	1081		99.91
PRK11028	330	6-phosphogluconolactonase; Provisional	99.91
KOG0290|consensus	364		99.91
KOG0322|consensus	323		99.91
COG2319	466	FOG: WD40 repeat [General function prediction only	99.91
KOG0307|consensus	1049		99.91
KOG1524|consensus	737		99.9
KOG0303|consensus	472		99.9
PRK11028	330	6-phosphogluconolactonase; Provisional	99.9
KOG1963|consensus	792		99.9
KOG0303|consensus	472		99.89
KOG0644|consensus	1113		99.89
KOG0642|consensus	577		99.89
KOG1517|consensus	1387		99.89
KOG0649|consensus	325		99.89
KOG1587|consensus	555		99.89
KOG1523|consensus	361		99.88
KOG0322|consensus	323		99.88
KOG1963|consensus	792		99.88
PRK01742	429	tolB translocation protein TolB; Provisional	99.88
KOG4497|consensus	447		99.87
KOG0649|consensus	325		99.87
KOG0290|consensus	364		99.87
KOG1524|consensus	737		99.87
KOG1188|consensus	376		99.87
PF02239	369	Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO	99.87
PRK01742	429	tolB translocation protein TolB; Provisional	99.87
KOG2110|consensus	391		99.87
KOG0642|consensus	577		99.86
KOG1587|consensus	555		99.86
KOG0771|consensus	398		99.86
KOG0771|consensus	398		99.86
KOG4227|consensus	609		99.86
KOG1334|consensus	559		99.85
KOG4497|consensus	447		99.85
KOG2110|consensus	391		99.85
KOG1272|consensus	545		99.85
PRK03629	429	tolB translocation protein TolB; Provisional	99.84
KOG1523|consensus	361		99.84
KOG1517|consensus	1387		99.84
PRK04922	433	tolB translocation protein TolB; Provisional	99.84
PRK03629	429	tolB translocation protein TolB; Provisional	99.83
PRK05137	435	tolB translocation protein TolB; Provisional	99.83
KOG0644|consensus	1113		99.82
KOG3881|consensus	412		99.82
KOG2315|consensus	566		99.82
KOG1310|consensus	758		99.82
PRK05137	435	tolB translocation protein TolB; Provisional	99.81
PRK04922	433	tolB translocation protein TolB; Provisional	99.8
PRK02889	427	tolB translocation protein TolB; Provisional	99.8
PF02239	369	Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO	99.8
KOG2111|consensus	346		99.8
KOG2321|consensus	703		99.8
KOG2139|consensus	445		99.8
KOG1272|consensus	545		99.8
KOG2394|consensus	636		99.79
KOG2394|consensus	636		99.79
KOG2139|consensus	445		99.79
KOG1240|consensus	1431		99.79
KOG1310|consensus	758		99.79
KOG2111|consensus	346		99.79
KOG4227|consensus	609		99.79
PRK02889	427	tolB translocation protein TolB; Provisional	99.79
PF10282	345	Lactonase: Lactonase, 7-bladed beta-propeller; Int	99.78
KOG1240|consensus	1431		99.77
TIGR02800	417	propeller_TolB tol-pal system beta propeller repea	99.75
PRK00178	430	tolB translocation protein TolB; Provisional	99.75
PF08662	194	eIF2A: Eukaryotic translation initiation factor eI	99.74
KOG1334|consensus	559		99.73
TIGR02658	352	TTQ_MADH_Hv methylamine dehydrogenase heavy chain.	99.73
KOG3881|consensus	412		99.72
PF08662	194	eIF2A: Eukaryotic translation initiation factor eI	99.72
KOG1409|consensus	404		99.72
PRK04792	448	tolB translocation protein TolB; Provisional	99.71
TIGR02800	417	propeller_TolB tol-pal system beta propeller repea	99.71
COG5354	561	Uncharacterized protein, contains Trp-Asp (WD) rep	99.7
PRK00178	430	tolB translocation protein TolB; Provisional	99.69
KOG2321|consensus	703		99.69
PF10282	345	Lactonase: Lactonase, 7-bladed beta-propeller; Int	99.69
PRK01029	428	tolB translocation protein TolB; Provisional	99.69
PRK04792	448	tolB translocation protein TolB; Provisional	99.69
PRK01029	428	tolB translocation protein TolB; Provisional	99.69
KOG2315|consensus	566		99.69
KOG0280|consensus	339		99.67
COG2706	346	3-carboxymuconate cyclase [Carbohydrate transport	99.67
COG5354	561	Uncharacterized protein, contains Trp-Asp (WD) rep	99.67
TIGR03300	377	assembly_YfgL outer membrane assembly lipoprotein	99.64
TIGR02658	352	TTQ_MADH_Hv methylamine dehydrogenase heavy chain.	99.64
KOG2314|consensus	698		99.63
KOG1354|consensus	433		99.63
COG2706	346	3-carboxymuconate cyclase [Carbohydrate transport	99.62
COG4946	668	Uncharacterized protein related to the periplasmic	99.62
KOG0974|consensus	967		99.6
KOG1354|consensus	433		99.59
KOG0280|consensus	339		99.58
KOG0974|consensus	967		99.57
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	99.56
KOG4547|consensus	541		99.54
KOG1912|consensus	1062		99.53
KOG4547|consensus	541		99.53
KOG2314|consensus	698		99.53
KOG1064|consensus	2439		99.51
KOG2041|consensus	1189		99.5
PF15492	282	Nbas_N: Neuroblastoma-amplified sequence, N termin	99.49
KOG1064|consensus	2439		99.49
KOG4532|consensus	344		99.48
COG4946	668	Uncharacterized protein related to the periplasmic	99.47
KOG1912|consensus	1062		99.47
KOG1409|consensus	404		99.46
PRK04043	419	tolB translocation protein TolB; Provisional	99.46
TIGR03300	377	assembly_YfgL outer membrane assembly lipoprotein	99.46
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	99.45
PF08450	246	SGL: SMP-30/Gluconolaconase/LRE-like region; Inter	99.45
COG5170	460	CDC55 Serine/threonine protein phosphatase 2A, reg	99.43
KOG3914|consensus	390		99.42
KOG2041|consensus	1189		99.42
KOG0309|consensus	1081		99.42
PF04762	928	IKI3: IKI3 family; InterPro: IPR006849 Members of	99.42
PRK04043	419	tolB translocation protein TolB; Provisional	99.39
PRK11138	394	outer membrane biogenesis protein BamB; Provisiona	99.38
PF08450	246	SGL: SMP-30/Gluconolaconase/LRE-like region; Inter	99.38
KOG4532|consensus	344		99.37
KOG4190|consensus	1034		99.36
PF15492	282	Nbas_N: Neuroblastoma-amplified sequence, N termin	99.33
KOG3914|consensus	390		99.32
PF07433	305	DUF1513: Protein of unknown function (DUF1513); In	99.31
PF13360	238	PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A	99.3
PF13360	238	PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A	99.28
KOG4190|consensus	1034		99.27
PF04762	928	IKI3: IKI3 family; InterPro: IPR006849 Members of	99.27
KOG2695|consensus	425		99.26
KOG4714|consensus	319		99.22
PRK11138	394	outer membrane biogenesis protein BamB; Provisiona	99.21
KOG0309|consensus	1081		99.21
PF00930	353	DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin	99.2
cd00216	488	PQQ_DH Dehydrogenases with pyrrolo-quinoline quino	99.2
KOG1832|consensus	1516		99.2
PRK02888	635	nitrous-oxide reductase; Validated	99.19
KOG4714|consensus	319		99.17
PF07433	305	DUF1513: Protein of unknown function (DUF1513); In	99.15
PF06433	342	Me-amine-dh_H: Methylamine dehydrogenase heavy cha	99.15
KOG0882|consensus	558		99.13
KOG2695|consensus	425		99.11
KOG3617|consensus	1416		99.07
KOG0882|consensus	558		99.07
PF00400	39	WD40: WD domain, G-beta repeat; InterPro: IPR01978	99.03
KOG1275|consensus	1118		99.01
COG5170	460	CDC55 Serine/threonine protein phosphatase 2A, reg	98.99
KOG1832|consensus	1516		98.96
KOG1275|consensus	1118		98.95
KOG2066|consensus	846		98.93
PF00400	39	WD40: WD domain, G-beta repeat; InterPro: IPR01978	98.89
KOG1645|consensus	463		98.89
PF00930	353	DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin	98.88
KOG4649|consensus	354		98.86
PF04841	410	Vps16_N: Vps16, N-terminal region; InterPro: IPR00	98.84
PF06977	248	SdiA-regulated: SdiA-regulated; InterPro: IPR00972	98.84
PF03178	321	CPSF_A: CPSF A subunit region; InterPro: IPR004871	98.84
TIGR03075	527	PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan	98.83
KOG1920|consensus	1265		98.82
KOG1008|consensus	783		98.8
PF04053	443	Coatomer_WDAD: Coatomer WD associated region ; Int	98.77
COG0823	425	TolB Periplasmic component of the Tol biopolymer t	98.75
PF11768	545	DUF3312: Protein of unknown function (DUF3312); In	98.75
PF11768	545	DUF3312: Protein of unknown function (DUF3312); In	98.73
KOG1920|consensus	1265		98.73
KOG2114|consensus	933		98.71
COG3386	307	Gluconolactonase [Carbohydrate transport and metab	98.7
COG0823	425	TolB Periplasmic component of the Tol biopolymer t	98.7
PF06977	248	SdiA-regulated: SdiA-regulated; InterPro: IPR00972	98.69
PF14583	386	Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C	98.69
PF04841	410	Vps16_N: Vps16, N-terminal region; InterPro: IPR00	98.68
PRK02888	635	nitrous-oxide reductase; Validated	98.67
PF08553	794	VID27: VID27 cytoplasmic protein; InterPro: IPR013	98.66
PF04053	443	Coatomer_WDAD: Coatomer WD associated region ; Int	98.66
PF06433	342	Me-amine-dh_H: Methylamine dehydrogenase heavy cha	98.65
cd00216	488	PQQ_DH Dehydrogenases with pyrrolo-quinoline quino	98.65
COG3391	381	Uncharacterized conserved protein [Function unknow	98.65
KOG2066|consensus	846		98.63
KOG2114|consensus	933		98.62
KOG1645|consensus	463		98.61
COG3386	307	Gluconolactonase [Carbohydrate transport and metab	98.56
KOG4649|consensus	354		98.54
KOG1008|consensus	783		98.54
PF08553	794	VID27: VID27 cytoplasmic protein; InterPro: IPR013	98.53
KOG3621|consensus	726		98.5
PF03178	321	CPSF_A: CPSF A subunit region; InterPro: IPR004871	98.47
PF08596	395	Lgl_C: Lethal giant larvae(Lgl) like, C-terminal;	98.45
PF14583	386	Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C	98.42
KOG3617|consensus	1416		98.36
PF14783	111	BBS2_Mid: Ciliary BBSome complex subunit 2, middle	98.34
TIGR03075	527	PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan	98.33
PF08596	395	Lgl_C: Lethal giant larvae(Lgl) like, C-terminal;	98.3
KOG3621|consensus	726		98.29
COG3391	381	Uncharacterized conserved protein [Function unknow	98.29
KOG4640|consensus	665		98.28
PF14783	111	BBS2_Mid: Ciliary BBSome complex subunit 2, middle	98.21
PRK13616	591	lipoprotein LpqB; Provisional	98.2
PF00780	275	CNH: CNH domain; InterPro: IPR001180 Based on sequ	98.18
PF07995	331	GSDH: Glucose / Sorbosone dehydrogenase; InterPro:	98.16
PF05096	264	Glu_cyclase_2: Glutamine cyclotransferase; InterPr	98.12
KOG2395|consensus	644		98.12
PF02897	414	Peptidase_S9_N: Prolyl oligopeptidase, N-terminal	98.08
PF02897	414	Peptidase_S9_N: Prolyl oligopeptidase, N-terminal	98.08
PF05694	461	SBP56: 56kDa selenium binding protein (SBP56); Int	98.08
smart00320	40	WD40 WD40 repeats. Note that these repeats are per	98.04
KOG4640|consensus	665		97.97
PRK13616	591	lipoprotein LpqB; Provisional	97.91
KOG1897|consensus	1096		97.91
smart00320	40	WD40 WD40 repeats. Note that these repeats are per	97.9
PF05096	264	Glu_cyclase_2: Glutamine cyclotransferase; InterPr	97.82
COG3490	366	Uncharacterized protein conserved in bacteria [Fun	97.82
PF05694	461	SBP56: 56kDa selenium binding protein (SBP56); Int	97.81
COG3490	366	Uncharacterized protein conserved in bacteria [Fun	97.78
KOG2444|consensus	238		97.76
KOG2395|consensus	644		97.71
KOG2079|consensus	1206		97.7
KOG4499|consensus	310		97.7
PF00780	275	CNH: CNH domain; InterPro: IPR001180 Based on sequ	97.67
PHA02713	557	hypothetical protein; Provisional	97.66
PF14870	302	PSII_BNR: Photosynthesis system II assembly factor	97.66
KOG2280|consensus	829		97.65
COG3204	316	Uncharacterized protein conserved in bacteria [Fun	97.62
KOG4441|consensus	571		97.57
PF08728	717	CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans	97.54
TIGR03074	764	PQQ_membr_DH membrane-bound PQQ-dependent dehydrog	97.45
KOG4499|consensus	310		97.44
COG3204	316	Uncharacterized protein conserved in bacteria [Fun	97.42
PF12894	47	Apc4_WD40: Anaphase-promoting complex subunit 4 WD	97.41
KOG2280|consensus	829		97.37
TIGR03074	764	PQQ_membr_DH membrane-bound PQQ-dependent dehydrog	97.35
PHA02713	557	hypothetical protein; Provisional	97.33
KOG1897|consensus	1096		97.33
PF12894	47	Apc4_WD40: Anaphase-promoting complex subunit 4 WD	97.26
KOG4441|consensus	571		97.21
PF12234	631	Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0	97.21
KOG3630|consensus	1405		97.2
COG4257	353	Vgb Streptogramin lyase [Defense mechanisms]	97.19
TIGR02604	367	Piru_Ver_Nterm putative membrane-bound dehydrogena	97.06
PF15390	671	DUF4613: Domain of unknown function (DUF4613)	97.0
PF10647	253	Gmad1: Lipoprotein LpqB beta-propeller domain; Int	96.99
KOG2079|consensus	1206		96.98
PF10647	253	Gmad1: Lipoprotein LpqB beta-propeller domain; Int	96.93
PF12234	631	Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0	96.93
KOG3630|consensus	1405		96.78
KOG2444|consensus	238		96.68
KOG1916|consensus	1283		96.66
PRK13684	334	Ycf48-like protein; Provisional	96.59
PRK10115	686	protease 2; Provisional	96.58
COG5167	776	VID27 Protein involved in vacuole import and degra	96.56
PHA03098	534	kelch-like protein; Provisional	96.53
PHA03098	534	kelch-like protein; Provisional	96.52
PF15390	671	DUF4613: Domain of unknown function (DUF4613)	96.5
PF07995	331	GSDH: Glucose / Sorbosone dehydrogenase; InterPro:	96.48
PF10168	717	Nup88: Nuclear pore component; InterPro: IPR019321	96.45
KOG2247|consensus	615		96.45
PF03022	287	MRJP: Major royal jelly protein; InterPro: IPR0035	96.44
PF14870	302	PSII_BNR: Photosynthesis system II assembly factor	96.43
PF02333	381	Phytase: Phytase; InterPro: IPR003431 Phytase (3.1	96.36
COG1520	370	FOG: WD40-like repeat [Function unknown]	96.33
TIGR02604	367	Piru_Ver_Nterm putative membrane-bound dehydrogena	96.23
KOG4460|consensus	741		96.09
KOG2377|consensus	657		96.03
PF14727	418	PHTB1_N: PTHB1 N-terminus	95.97
KOG1900|consensus	1311		95.89
COG4257	353	Vgb Streptogramin lyase [Defense mechanisms]	95.86
KOG1916|consensus	1283		95.84
PLN00033	398	photosystem II stability/assembly factor; Provisio	95.79
PF14761	215	HPS3_N: Hermansky-Pudlak syndrome 3	95.79
PF10313	43	DUF2415: Uncharacterised protein domain (DUF2415);	95.78
PF10168	717	Nup88: Nuclear pore component; InterPro: IPR019321	95.77
PF11635	753	Med16: Mediator complex subunit 16; InterPro: IPR0	95.7
COG5167	776	VID27 Protein involved in vacuole import and degra	95.69
PF14655	415	RAB3GAP2_N: Rab3 GTPase-activating protein regulat	95.69
PF08728	717	CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans	95.62
PF03022	287	MRJP: Major royal jelly protein; InterPro: IPR0035	95.62
PRK10115	686	protease 2; Provisional	95.6
COG4590	733	ABC-type uncharacterized transport system, permeas	95.58
PF10313	43	DUF2415: Uncharacterised protein domain (DUF2415);	95.44
KOG2377|consensus	657		95.26
TIGR03118	336	PEPCTERM_chp_1 conserved hypothetical protein TIGR	95.07
PF14761	215	HPS3_N: Hermansky-Pudlak syndrome 3	95.05
PF07569	219	Hira: TUP1-like enhancer of split; InterPro: IPR01	95.04
PF13449	326	Phytase-like: Esterase-like activity of phytase	94.9
TIGR02276	42	beta_rpt_yvtn 40-residue YVTN family beta-propelle	94.88
PHA02790	480	Kelch-like protein; Provisional	94.7
PF14781	136	BBS2_N: Ciliary BBSome complex subunit 2, N-termin	94.41
PF12657	173	TFIIIC_delta: Transcription factor IIIC subunit de	94.38
COG3292	671	Predicted periplasmic ligand-binding sensor domain	94.32
KOG1900|consensus	1311		94.23
PF05935	477	Arylsulfotrans: Arylsulfotransferase (ASST); Inter	94.14
PF07569	219	Hira: TUP1-like enhancer of split; InterPro: IPR01	94.13
TIGR03118	336	PEPCTERM_chp_1 conserved hypothetical protein TIGR	94.08
KOG2247|consensus	615		93.9
PF11715	547	Nup160: Nucleoporin Nup120/160; InterPro: IPR02171	93.9
PHA02790	480	Kelch-like protein; Provisional	93.81
PF07250	243	Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterP	93.77
PF12768	281	Rax2: Cortical protein marker for cell polarity	93.66
PF05935	477	Arylsulfotrans: Arylsulfotransferase (ASST); Inter	93.59
PRK13684	334	Ycf48-like protein; Provisional	93.55
COG3823	262	Glutamine cyclotransferase [Posttranslational modi	93.52
TIGR02276	42	beta_rpt_yvtn 40-residue YVTN family beta-propelle	93.49
PF14781	136	BBS2_N: Ciliary BBSome complex subunit 2, N-termin	93.36
PF12768	281	Rax2: Cortical protein marker for cell polarity	93.15
PF14655	415	RAB3GAP2_N: Rab3 GTPase-activating protein regulat	93.02
PF13449	326	Phytase-like: Esterase-like activity of phytase	92.95
COG5290	1243	IkappaB kinase complex, IKAP component [Transcript	92.92
COG4590	733	ABC-type uncharacterized transport system, permeas	92.76
PF07676	39	PD40: WD40-like Beta Propeller Repeat; InterPro: I	92.07
PF11715	547	Nup160: Nucleoporin Nup120/160; InterPro: IPR02171	92.0
PF12657	173	TFIIIC_delta: Transcription factor IIIC subunit de	91.98
TIGR01063	800	gyrA DNA gyrase, A subunit. This model describes t	91.85
COG3823	262	Glutamine cyclotransferase [Posttranslational modi	91.68
PF10214	765	Rrn6: RNA polymerase I-specific transcription-init	91.65
PF03088	89	Str_synth: Strictosidine synthase; InterPro: IPR01	91.55
PF08801	422	Nucleoporin_N: Nup133 N terminal like; InterPro: I	91.4
PF07250	243	Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterP	91.38
PF02333	381	Phytase: Phytase; InterPro: IPR003431 Phytase (3.1	91.14
COG5276	370	Uncharacterized conserved protein [Function unknow	91.1
COG1520	370	FOG: WD40-like repeat [Function unknown]	91.08
smart00036	302	CNH Domain found in NIK1-like kinases, mouse citro	91.07
PF08801	422	Nucleoporin_N: Nup133 N terminal like; InterPro: I	91.0
COG5276	370	Uncharacterized conserved protein [Function unknow	90.94
KOG4460|consensus	741		90.82
TIGR03606	454	non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH	90.76
COG5308	1263	NUP170 Nuclear pore complex subunit [Intracellular	90.61
PF14269	299	Arylsulfotran_2: Arylsulfotransferase (ASST)	90.51
TIGR03606	454	non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH	90.33
KOG1983|consensus	993		90.08
KOG1898|consensus	1205		89.69
smart00564	33	PQQ beta-propeller repeat. Beta-propeller repeat o	89.67
PF01011	38	PQQ: PQQ enzyme repeat family.; InterPro: IPR00237	89.35

>KOG0271|consensus

Probab=100.00  E-value=7e-57  Score=341.21  Aligned_cols=301  Identities=19%  Similarity=0.252  Sum_probs=266.9

Q ss_pred             ceEEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccc-eecccCCcceEE
Q psy10867          5 NEVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKA-QLRLICPGRISS   83 (343)
Q Consensus         5 ~~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~-~~~~~~~~~v~~   83 (343)
                      ...++|++||.++++||+.+..++.+.++|.. .|.|++|+|||+.+|+|+.||.|++||.++++.+ ..+.+|...|++
T Consensus       127 g~~l~tGsGD~TvR~WD~~TeTp~~t~KgH~~-WVlcvawsPDgk~iASG~~dg~I~lwdpktg~~~g~~l~gH~K~It~  205 (480)
T KOG0271|consen  127 GSRLVTGSGDTTVRLWDLDTETPLFTCKGHKN-WVLCVAWSPDGKKIASGSKDGSIRLWDPKTGQQIGRALRGHKKWITA  205 (480)
T ss_pred             CceEEecCCCceEEeeccCCCCcceeecCCcc-EEEEEEECCCcchhhccccCCeEEEecCCCCCcccccccCcccceeE
Confidence            34455667799999999999999999999999 9999999999999999999999999999999887 778899999999


Q ss_pred             EEECC-----CCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeee
Q psy10867         84 MQASP-----DAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTV  157 (343)
Q Consensus        84 ~~~s~-----~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~  157 (343)
                      ++|.|     ..++||+ +.||.++|||+..++++..+.+|+.+|+|++|-.+ .+|++|+.|++|++|+...+.     
T Consensus       206 Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~~~lsgHT~~VTCvrwGG~-gliySgS~DrtIkvw~a~dG~-----  279 (480)
T KOG0271|consen  206 LAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVRTLSGHTASVTCVRWGGE-GLIYSGSQDRTIKVWRALDGK-----  279 (480)
T ss_pred             EeecccccCCCccceecccCCCCEEEEEccCceEEEEeccCccceEEEEEcCC-ceEEecCCCceEEEEEccchh-----
Confidence            99976     5678887 68999999999999999999999999999999644 489999999999999998875     


Q ss_pred             ecCCCCCCCCccccccceeeeecccccceEEEEeec-----------CCC-----------------------ceEEEEe
Q psy10867        158 AFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSK-----------LGA-----------------------KSRVASV  203 (343)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-----------~~~-----------------------~~~l~~~  203 (343)
                                       ..+.+.+|...|+.++.+.           .+.                       +..+++|
T Consensus       280 -----------------~~r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSg  342 (480)
T KOG0271|consen  280 -----------------LCRELKGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSG  342 (480)
T ss_pred             -----------------HHHhhcccchheeeeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcceeEEe
Confidence                             4556678999998888762           121                       1469999


Q ss_pred             eCCCeEEEEecCCCc-eEEEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCc
Q psy10867        204 SHDRTCKIFDLCTGE-DLLSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQ  281 (343)
Q Consensus       204 ~~d~~i~~wd~~~~~-~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (343)
                      +.|.++.+|+....+ ++.... |..-|+.+.|+||++++++++-|..|++||.++++.           +..+++|-+.
T Consensus       343 sDd~tlflW~p~~~kkpi~rmtgHq~lVn~V~fSPd~r~IASaSFDkSVkLW~g~tGk~-----------lasfRGHv~~  411 (480)
T KOG0271|consen  343 SDDFTLFLWNPFKSKKPITRMTGHQALVNHVSFSPDGRYIASASFDKSVKLWDGRTGKF-----------LASFRGHVAA  411 (480)
T ss_pred             cCCceEEEecccccccchhhhhchhhheeeEEECCCccEEEEeecccceeeeeCCCcch-----------hhhhhhccce
Confidence            999999999876443 444443 788899999999999999999999999999998554           7789999999


Q ss_pred             EEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc-cCCceEEEEEccCCCeeeeccc
Q psy10867        282 VTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVLGAFLGLLPPAIHDYDF  340 (343)
Q Consensus       282 v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~  340 (343)
                      |+.++|+.|.++|++||.|.++++|++++.+....+. |.++|.++.|+|||+.+++++-
T Consensus       412 VYqvawsaDsRLlVS~SkDsTLKvw~V~tkKl~~DLpGh~DEVf~vDwspDG~rV~sggk  471 (480)
T KOG0271|consen  412 VYQVAWSADSRLLVSGSKDSTLKVWDVRTKKLKQDLPGHADEVFAVDWSPDGQRVASGGK  471 (480)
T ss_pred             eEEEEeccCccEEEEcCCCceEEEEEeeeeeecccCCCCCceEEEEEecCCCceeecCCC
Confidence            9999999999999999999999999999999999998 9999999999999999998863

>KOG0271|consensus

Probab=100.00  E-value=5.6e-53  Score=320.05  Aligned_cols=279  Identities=19%  Similarity=0.235  Sum_probs=251.4

Q ss_pred             eEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-ecCCeEEEE
Q psy10867         26 TLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SIETKLHMW  104 (343)
Q Consensus        26 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~  104 (343)
                      ++-..+.+|.+ +|.|++|+|+|..+++|+.|.++++||+.+..+..+..+|..-|.|++|+|||+.||+ +.||.|++|
T Consensus       106 rCssS~~GH~e-~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~TeTp~~t~KgH~~WVlcvawsPDgk~iASG~~dg~I~lw  184 (480)
T KOG0271|consen  106 RCSSSIAGHGE-AVLSVQFSPTGSRLVTGSGDTTVRLWDLDTETPLFTCKGHKNWVLCVAWSPDGKKIASGSKDGSIRLW  184 (480)
T ss_pred             eeccccCCCCC-cEEEEEecCCCceEEecCCCceEEeeccCCCCcceeecCCccEEEEEEECCCcchhhccccCCeEEEe
Confidence            44567899999 9999999999999999999999999999999999999999999999999999999998 689999999


Q ss_pred             EccCCceE-EEecccCCCeEEEEEec-----CCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeee
Q psy10867        105 QISSGRLL-ATASSHYQPITIVKWSA-----DSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHV  178 (343)
Q Consensus       105 ~~~~~~~~-~~~~~~~~~v~~~~~~~-----~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (343)
                      |..+|+++ ..+.+|...|++++|.|     ..++|++++.||.++|||+..+.                      .+..
T Consensus       185 dpktg~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~----------------------~~~~  242 (480)
T KOG0271|consen  185 DPKTGQQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGT----------------------CVRT  242 (480)
T ss_pred             cCCCCCcccccccCcccceeEEeecccccCCCccceecccCCCCEEEEEccCce----------------------EEEE
Confidence            99998765 57899999999999976     56799999999999999998864                      5566


Q ss_pred             ecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEc-----------CCCC-------
Q psy10867        179 KSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFD-----------GTED-------  239 (343)
Q Consensus       179 ~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~-----------~~~~-------  239 (343)
                      +.+|..+|+|++|--++   ++++|+.|++|++|+...|+....+. |...|+.++.+           |.++       
T Consensus       243 lsgHT~~VTCvrwGG~g---liySgS~DrtIkvw~a~dG~~~r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se  319 (480)
T KOG0271|consen  243 LSGHTASVTCVRWGGEG---LIYSGSQDRTIKVWRALDGKLCRELKGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSE  319 (480)
T ss_pred             eccCccceEEEEEcCCc---eEEecCCCceEEEEEccchhHHHhhcccchheeeeeccchhhhhccccccccccCCChHH
Confidence            78999999999998776   99999999999999999999888887 66778877765           3333       


Q ss_pred             ------------------EEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCC
Q psy10867        240 ------------------NIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADE  301 (343)
Q Consensus       240 ------------------~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg  301 (343)
                                        .|++|+.|.++.+|+.....          +++..+.+|...|+.+.||||++++|++|.|.
T Consensus       320 ~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~k----------kpi~rmtgHq~lVn~V~fSPd~r~IASaSFDk  389 (480)
T KOG0271|consen  320 EQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPFKSK----------KPITRMTGHQALVNHVSFSPDGRYIASASFDK  389 (480)
T ss_pred             HHHHHHHHHHHhhccCcceeEEecCCceEEEecccccc----------cchhhhhchhhheeeEEECCCccEEEEeeccc
Confidence                              49999999999999876533          33667899999999999999999999999999


Q ss_pred             cEEEEecccceeeeecc-cCCceEEEEEccCCCeeeeccc
Q psy10867        302 TLKIWHTISRQCLRTIQ-HKGPVLGAFLGLLPPAIHDYDF  340 (343)
Q Consensus       302 ~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~  340 (343)
                      .|++||.++|+.+.+|+ |-++|..++|+.|.++|++++-
T Consensus       390 SVkLW~g~tGk~lasfRGHv~~VYqvawsaDsRLlVS~Sk  429 (480)
T KOG0271|consen  390 SVKLWDGRTGKFLASFRGHVAAVYQVAWSADSRLLVSGSK  429 (480)
T ss_pred             ceeeeeCCCcchhhhhhhccceeEEEEeccCccEEEEcCC
Confidence            99999999999999999 9999999999999999999874

>KOG0272|consensus

Probab=100.00  E-value=9.5e-52  Score=316.86  Aligned_cols=269  Identities=22%  Similarity=0.350  Sum_probs=248.9

Q ss_pred             ccceEEEecCC--------CCeEEEEecCCceEEEEEecCCCCcceEEEEeCC--ceEEEEEcCCCeEEEEeCCCcccce
Q psy10867          3 LLNEVAFSYDG--------SGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGN--DYVLGVEKGKPMIQAWPVNSQEKAQ   72 (343)
Q Consensus         3 ~v~~~~~s~~~--------dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~~~~i~iw~~~~~~~~~   72 (343)
                      ||..+.||.++        +|.++||+..+...+++|.+|.. .+.++.|+|.  +.-+++++.||++++|++++...+.
T Consensus       177 Pis~~~fS~ds~~laT~swsG~~kvW~~~~~~~~~~l~gH~~-~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~e~~l~  255 (459)
T KOG0272|consen  177 PISGCSFSRDSKHLATGSWSGLVKVWSVPQCNLLQTLRGHTS-RVGAAVFHPVDSDLNLATASADGTVKLWKLSQETPLQ  255 (459)
T ss_pred             cceeeEeecCCCeEEEeecCCceeEeecCCcceeEEEecccc-ceeeEEEccCCCccceeeeccCCceeeeccCCCcchh
Confidence            55555566555        79999999999999999999999 9999999996  5688888888999999999988899


Q ss_pred             ecccCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCcc
Q psy10867         73 LRLICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRL  151 (343)
Q Consensus        73 ~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~  151 (343)
                      .+.+|..+|..++|+|+|++|++ +.|.+-++||+.++..+...++|...|.+++|.|||.++++|+.|..-+|||++++
T Consensus       256 ~l~gH~~RVs~VafHPsG~~L~TasfD~tWRlWD~~tk~ElL~QEGHs~~v~~iaf~~DGSL~~tGGlD~~~RvWDlRtg  335 (459)
T KOG0272|consen  256 DLEGHLARVSRVAFHPSGKFLGTASFDSTWRLWDLETKSELLLQEGHSKGVFSIAFQPDGSLAATGGLDSLGRVWDLRTG  335 (459)
T ss_pred             hhhcchhhheeeeecCCCceeeecccccchhhcccccchhhHhhcccccccceeEecCCCceeeccCccchhheeecccC
Confidence            99999999999999999999998 78999999999999999889999999999999999999999999999999999998


Q ss_pred             ceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEE
Q psy10867        152 ICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLT  230 (343)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~  230 (343)
                      .                      .+..+.+|..+|.+++|+|+|  ..+++|+.|++++|||++..+.+..+. |.+-|+
T Consensus       336 r----------------------~im~L~gH~k~I~~V~fsPNG--y~lATgs~Dnt~kVWDLR~r~~ly~ipAH~nlVS  391 (459)
T KOG0272|consen  336 R----------------------CIMFLAGHIKEILSVAFSPNG--YHLATGSSDNTCKVWDLRMRSELYTIPAHSNLVS  391 (459)
T ss_pred             c----------------------EEEEecccccceeeEeECCCc--eEEeecCCCCcEEEeeecccccceecccccchhh
Confidence            5                      566678999999999999999  899999999999999999999888887 788899


Q ss_pred             EEEEcC-CCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEe
Q psy10867        231 CVAFDG-TEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWH  307 (343)
Q Consensus       231 ~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd  307 (343)
                      .+.|+| .|.+|++++.|++++||...+...           +..+.||.+.|.++.++||++++++++.|.++++|.
T Consensus       392 ~Vk~~p~~g~fL~TasyD~t~kiWs~~~~~~-----------~ksLaGHe~kV~s~Dis~d~~~i~t~s~DRT~KLW~  458 (459)
T KOG0272|consen  392 QVKYSPQEGYFLVTASYDNTVKIWSTRTWSP-----------LKSLAGHEGKVISLDISPDSQAIATSSFDRTIKLWR  458 (459)
T ss_pred             heEecccCCeEEEEcccCcceeeecCCCccc-----------chhhcCCccceEEEEeccCCceEEEeccCceeeecc
Confidence            999999 788999999999999999887544           778999999999999999999999999999999995

>KOG0272|consensus

Probab=100.00  E-value=9.9e-52  Score=316.78  Aligned_cols=273  Identities=22%  Similarity=0.300  Sum_probs=254.6

Q ss_pred             cCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCC--CCEEEE-ecCCeEEEEEccCC
Q psy10867         33 GASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPD--AAYIAV-SIETKLHMWQISSG  109 (343)
Q Consensus        33 ~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~-~~d~~i~v~~~~~~  109 (343)
                      +... ++..+.|++|+..+++|+-+|.+++|+..+...++.+.+|...|.++.|+|.  +.-+|+ +.||++++|++.+.
T Consensus       173 gd~r-Pis~~~fS~ds~~laT~swsG~~kvW~~~~~~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~e  251 (459)
T KOG0272|consen  173 GDTR-PISGCSFSRDSKHLATGSWSGLVKVWSVPQCNLLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKLSQE  251 (459)
T ss_pred             cCCC-cceeeEeecCCCeEEEeecCCceeEeecCCcceeEEEeccccceeeEEEccCCCccceeeeccCCceeeeccCCC
Confidence            3445 8999999999999999999999999999999888999999999999999997  456776 78999999999999


Q ss_pred             ceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEE
Q psy10867        110 RLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHV  189 (343)
Q Consensus       110 ~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  189 (343)
                      +++..+.+|...|..++|+|+|++|+|++.|.+-++||+++..                      .+....+|...|.++
T Consensus       252 ~~l~~l~gH~~RVs~VafHPsG~~L~TasfD~tWRlWD~~tk~----------------------ElL~QEGHs~~v~~i  309 (459)
T KOG0272|consen  252 TPLQDLEGHLARVSRVAFHPSGKFLGTASFDSTWRLWDLETKS----------------------ELLLQEGHSKGVFSI  309 (459)
T ss_pred             cchhhhhcchhhheeeeecCCCceeeecccccchhhcccccch----------------------hhHhhccccccccee
Confidence            9999999999999999999999999999999999999999974                      555667999999999


Q ss_pred             EeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccC
Q psy10867        190 TLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQD  268 (343)
Q Consensus       190 ~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~  268 (343)
                      +|.|+|  .++++|+.|..-+|||+++++++..+. |..+|.+++|+|+|..|++|+.|++++|||++.-..        
T Consensus       310 af~~DG--SL~~tGGlD~~~RvWDlRtgr~im~L~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~~--------  379 (459)
T KOG0272|consen  310 AFQPDG--SLAATGGLDSLGRVWDLRTGRCIMFLAGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMRSE--------  379 (459)
T ss_pred             EecCCC--ceeeccCccchhheeecccCcEEEEecccccceeeEeECCCceEEeecCCCCcEEEeeeccccc--------
Confidence            999999  899999999999999999999999888 788999999999999999999999999999997443        


Q ss_pred             CCCCCccccccCcEEEEEEcc-CCCEEEEEeCCCcEEEEecccceeeeecc-cCCceEEEEEccCCCeeeecccC
Q psy10867        269 STSNPDFIGHEKQVTSLSCSI-TGITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVLGAFLGLLPPAIHDYDFT  341 (343)
Q Consensus       269 ~~~~~~~~~~~~~v~~~~~s~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~~  341 (343)
                         +..+.+|.+-|+.+.|+| .|.+|++++.|++++||...++.+++++. |.+.|.++..+||+++|+++++.
T Consensus       380 ---ly~ipAH~nlVS~Vk~~p~~g~fL~TasyD~t~kiWs~~~~~~~ksLaGHe~kV~s~Dis~d~~~i~t~s~D  451 (459)
T KOG0272|consen  380 ---LYTIPAHSNLVSQVKYSPQEGYFLVTASYDNTVKIWSTRTWSPLKSLAGHEGKVISLDISPDSQAIATSSFD  451 (459)
T ss_pred             ---ceecccccchhhheEecccCCeEEEEcccCcceeeecCCCcccchhhcCCccceEEEEeccCCceEEEeccC
Confidence               678899999999999999 67899999999999999999999999999 99999999999999999999875

>KOG0315|consensus

Probab=100.00  E-value=4.5e-47  Score=272.22  Aligned_cols=287  Identities=15%  Similarity=0.254  Sum_probs=249.9

Q ss_pred             eEEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCccc--ceecccCCcceEE
Q psy10867          6 EVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEK--AQLRLICPGRISS   83 (343)
Q Consensus         6 ~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~--~~~~~~~~~~v~~   83 (343)
                      -+++|++-|.+|++|...+|.+.++++..+. .|+.+.+.|+++.||++.. ..||+||++++..  +..+.+|...|.+
T Consensus        11 viLvsA~YDhTIRfWqa~tG~C~rTiqh~ds-qVNrLeiTpdk~~LAaa~~-qhvRlyD~~S~np~Pv~t~e~h~kNVta   88 (311)
T KOG0315|consen   11 VILVSAGYDHTIRFWQALTGICSRTIQHPDS-QVNRLEITPDKKDLAAAGN-QHVRLYDLNSNNPNPVATFEGHTKNVTA   88 (311)
T ss_pred             eEEEeccCcceeeeeehhcCeEEEEEecCcc-ceeeEEEcCCcchhhhccC-CeeEEEEccCCCCCceeEEeccCCceEE
Confidence            5788999999999999999999999999988 9999999999999999988 7999999998765  4777899999999


Q ss_pred             EEECCCCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCC
Q psy10867         84 MQASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIP  162 (343)
Q Consensus        84 ~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~  162 (343)
                      +.|..+|+++++ +.||+++|||++...+.+.+ .|..+|+++..+|+...|++|..+|.|++||+....+...+     
T Consensus        89 VgF~~dgrWMyTgseDgt~kIWdlR~~~~qR~~-~~~spVn~vvlhpnQteLis~dqsg~irvWDl~~~~c~~~l-----  162 (311)
T KOG0315|consen   89 VGFQCDGRWMYTGSEDGTVKIWDLRSLSCQRNY-QHNSPVNTVVLHPNQTELISGDQSGNIRVWDLGENSCTHEL-----  162 (311)
T ss_pred             EEEeecCeEEEecCCCceEEEEeccCcccchhc-cCCCCcceEEecCCcceEEeecCCCcEEEEEccCCcccccc-----
Confidence            999999999998 68999999999986665555 47799999999999999999999999999999987554322     


Q ss_pred             CCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCce------EEEee-cCCcEEEEEEc
Q psy10867        163 GSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGED------LLSLI-LDTRLTCVAFD  235 (343)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~------~~~~~-~~~~i~~~~~~  235 (343)
                                      .......|.++.+.|+|  .+++.+...|.+++|++-+.+.      +.+++ |...+..+.++
T Consensus       163 ----------------iPe~~~~i~sl~v~~dg--sml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lS  224 (311)
T KOG0315|consen  163 ----------------IPEDDTSIQSLTVMPDG--SMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLS  224 (311)
T ss_pred             ----------------CCCCCcceeeEEEcCCC--cEEEEecCCccEEEEEccCCCccccceEhhheecccceEEEEEEC
Confidence                            12344789999999999  8999999999999999876543      33344 67789999999


Q ss_pred             CCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeee
Q psy10867        236 GTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLR  315 (343)
Q Consensus       236 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~  315 (343)
                      |++++|++++.|.+++||+.+.+-. .         ...+.+|+.+++.++||.||+||++|+.|+.+++|++..++.++
T Consensus       225 Pd~k~lat~ssdktv~iwn~~~~~k-l---------e~~l~gh~rWvWdc~FS~dg~YlvTassd~~~rlW~~~~~k~v~  294 (311)
T KOG0315|consen  225 PDVKYLATCSSDKTVKIWNTDDFFK-L---------ELVLTGHQRWVWDCAFSADGEYLVTASSDHTARLWDLSAGKEVR  294 (311)
T ss_pred             CCCcEEEeecCCceEEEEecCCcee-e---------EEEeecCCceEEeeeeccCccEEEecCCCCceeecccccCceee
Confidence            9999999999999999999988621 1         34578999999999999999999999999999999999999999


Q ss_pred             ecc-cCCceEEEEE
Q psy10867        316 TIQ-HKGPVLGAFL  328 (343)
Q Consensus       316 ~~~-~~~~v~~~~~  328 (343)
                      ... |.....+++.
T Consensus       295 qy~gh~K~~vc~~l  308 (311)
T KOG0315|consen  295 QYQGHHKAAVCVAL  308 (311)
T ss_pred             ecCCcccccEEEEe
Confidence            988 6666666654

>KOG0286|consensus

Probab=100.00  E-value=6.1e-47  Score=277.56  Aligned_cols=266  Identities=20%  Similarity=0.270  Sum_probs=244.2

Q ss_pred             eEEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCc------ccceecccCCc
Q psy10867          6 EVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQ------EKAQLRLICPG   79 (343)
Q Consensus         6 ~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~------~~~~~~~~~~~   79 (343)
                      ..++|++.||.+.|||..+...++.++.... .|...+|+|.|.++|+|+-|+...||++.+.      +..+.+.+|.+
T Consensus        68 r~ivSaSqDGklIvWDs~TtnK~haipl~s~-WVMtCA~sPSg~~VAcGGLdN~Csiy~ls~~d~~g~~~v~r~l~gHtg  146 (343)
T KOG0286|consen   68 RRIVSASQDGKLIVWDSFTTNKVHAIPLPSS-WVMTCAYSPSGNFVACGGLDNKCSIYPLSTRDAEGNVRVSRELAGHTG  146 (343)
T ss_pred             CeEEeeccCCeEEEEEcccccceeEEecCce-eEEEEEECCCCCeEEecCcCceeEEEecccccccccceeeeeecCccc
Confidence            4567777799999999999999999999888 9999999999999999999999999999865      23366789999


Q ss_pred             ceEEEEECCCCCEEEEecCCeEEEEEccCCceEEEecccCCCeEEEEEec-CCCEEEEecCCCeEEEeecCccceeeeee
Q psy10867         80 RISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSA-DSNFIVTGGEDGTICVWQLSRLICKQTVA  158 (343)
Q Consensus        80 ~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~  158 (343)
                      .+.++.|.+|+++|.++.|.+..+||+++++.+..+.+|.+.|.++.++| +++.+++|+-|+..++||++.+.      
T Consensus       147 ylScC~f~dD~~ilT~SGD~TCalWDie~g~~~~~f~GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~~~------  220 (343)
T KOG0286|consen  147 YLSCCRFLDDNHILTGSGDMTCALWDIETGQQTQVFHGHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSGQ------  220 (343)
T ss_pred             eeEEEEEcCCCceEecCCCceEEEEEcccceEEEEecCCcccEEEEecCCCCCCeEEecccccceeeeeccCcc------
Confidence            99999999998888889999999999999999999999999999999999 99999999999999999999985      


Q ss_pred             cCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeec---CCcEEEEEEc
Q psy10867        159 FGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLIL---DTRLTCVAFD  235 (343)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~---~~~i~~~~~~  235 (343)
                                      ..+.+.+|...|++++|.|+|  .-+++|+.|++.++||++..+.+..+.+   ..+|++++|+
T Consensus       221 ----------------c~qtF~ghesDINsv~ffP~G--~afatGSDD~tcRlyDlRaD~~~a~ys~~~~~~gitSv~FS  282 (343)
T KOG0286|consen  221 ----------------CVQTFEGHESDINSVRFFPSG--DAFATGSDDATCRLYDLRADQELAVYSHDSIICGITSVAFS  282 (343)
T ss_pred             ----------------eeEeecccccccceEEEccCC--CeeeecCCCceeEEEeecCCcEEeeeccCcccCCceeEEEc
Confidence                            455667999999999999999  8999999999999999999999988875   4579999999


Q ss_pred             CCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEe
Q psy10867        236 GTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWH  307 (343)
Q Consensus       236 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd  307 (343)
                      ..|++|++|..|..+.+||.-..+.           +..+.+|.+.|+++..+|||.-+++||.|..+|||.
T Consensus       283 ~SGRlLfagy~d~~c~vWDtlk~e~-----------vg~L~GHeNRvScl~~s~DG~av~TgSWDs~lriW~  343 (343)
T KOG0286|consen  283 KSGRLLFAGYDDFTCNVWDTLKGER-----------VGVLAGHENRVSCLGVSPDGMAVATGSWDSTLRIWA  343 (343)
T ss_pred             ccccEEEeeecCCceeEeeccccce-----------EEEeeccCCeeEEEEECCCCcEEEecchhHheeecC
Confidence            9999999999999999999877554           556889999999999999999999999999999994

>KOG0286|consensus

Probab=100.00  E-value=1e-45  Score=271.18  Aligned_cols=280  Identities=17%  Similarity=0.225  Sum_probs=251.2

Q ss_pred             EEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-ecCCeEEEEE
Q psy10867         27 LLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQ  105 (343)
Q Consensus        27 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~  105 (343)
                      ..+++++|.+ .|.++.|++|.+.+++++.||.+.|||.-+...++.+.-....|..++|+|.|+++|+ |-|+...||+
T Consensus        47 ~rr~LkGH~~-Ki~~~~ws~Dsr~ivSaSqDGklIvWDs~TtnK~haipl~s~WVMtCA~sPSg~~VAcGGLdN~Csiy~  125 (343)
T KOG0286|consen   47 TRRTLKGHLN-KIYAMDWSTDSRRIVSASQDGKLIVWDSFTTNKVHAIPLPSSWVMTCAYSPSGNFVACGGLDNKCSIYP  125 (343)
T ss_pred             eEEEeccccc-ceeeeEecCCcCeEEeeccCCeEEEEEcccccceeEEecCceeEEEEEECCCCCeEEecCcCceeEEEe
Confidence            3478999999 9999999999999999999999999999888878777777888999999999999998 6899999999


Q ss_pred             ccCC------ceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeee
Q psy10867        106 ISSG------RLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVK  179 (343)
Q Consensus       106 ~~~~------~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (343)
                      +.+.      ...+.+.+|.+.+.|+.|.+ ...|++++.|.+..+||+++++                      .+..+
T Consensus       126 ls~~d~~g~~~v~r~l~gHtgylScC~f~d-D~~ilT~SGD~TCalWDie~g~----------------------~~~~f  182 (343)
T KOG0286|consen  126 LSTRDAEGNVRVSRELAGHTGYLSCCRFLD-DNHILTGSGDMTCALWDIETGQ----------------------QTQVF  182 (343)
T ss_pred             cccccccccceeeeeecCccceeEEEEEcC-CCceEecCCCceEEEEEcccce----------------------EEEEe
Confidence            9854      34567889999999999987 5578999999999999999975                      56667


Q ss_pred             cccccceEEEEeec-CCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeec
Q psy10867        180 SQHSLPVTHVTLSK-LGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQ  257 (343)
Q Consensus       180 ~~~~~~v~~~~~~~-~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~  257 (343)
                      .+|.+.|.+++++| ++  +.+++|+.|+..++||++.+.++++|. |++.|++++|.|+|.-+++|+.|++.++||++.
T Consensus       183 ~GH~gDV~slsl~p~~~--ntFvSg~cD~~aklWD~R~~~c~qtF~ghesDINsv~ffP~G~afatGSDD~tcRlyDlRa  260 (343)
T KOG0286|consen  183 HGHTGDVMSLSLSPSDG--NTFVSGGCDKSAKLWDVRSGQCVQTFEGHESDINSVRFFPSGDAFATGSDDATCRLYDLRA  260 (343)
T ss_pred             cCCcccEEEEecCCCCC--CeEEecccccceeeeeccCcceeEeecccccccceEEEccCCCeeeecCCCceeEEEeecC
Confidence            79999999999999 66  899999999999999999999999998 888999999999999999999999999999998


Q ss_pred             ccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc-cCCceEEEEEccCCCeee
Q psy10867        258 VPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVLGAFLGLLPPAIH  336 (343)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~  336 (343)
                      ......+         .-..-..+|++++||..|++|++|..|..+.+||.-.++.+..+. |.+.|.++..+|||.-++
T Consensus       261 D~~~a~y---------s~~~~~~gitSv~FS~SGRlLfagy~d~~c~vWDtlk~e~vg~L~GHeNRvScl~~s~DG~av~  331 (343)
T KOG0286|consen  261 DQELAVY---------SHDSIICGITSVAFSKSGRLLFAGYDDFTCNVWDTLKGERVGVLAGHENRVSCLGVSPDGMAVA  331 (343)
T ss_pred             CcEEeee---------ccCcccCCceeEEEcccccEEEeeecCCceeEeeccccceEEEeeccCCeeEEEEECCCCcEEE
Confidence            6554322         222334679999999999999999999999999999999999998 999999999999999999


Q ss_pred             ecccC
Q psy10867        337 DYDFT  341 (343)
Q Consensus       337 ~~~~~  341 (343)
                      ++++.
T Consensus       332 TgSWD  336 (343)
T KOG0286|consen  332 TGSWD  336 (343)
T ss_pred             ecchh
Confidence            99864

>KOG0279|consensus

Probab=100.00  E-value=7e-46  Score=270.27  Aligned_cols=276  Identities=20%  Similarity=0.243  Sum_probs=236.8

Q ss_pred             ceEEEecCCCCeEEEEecCC-----ceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCc
Q psy10867          5 NEVAFSYDGSGAISVWEPKG-----GTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPG   79 (343)
Q Consensus         5 ~~~~~s~~~dg~i~iwd~~~-----~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~   79 (343)
                      ..++++++.|..+.+|++..     |.+++.+++|.. .|..+..++||.++.+++.|+++++||+.+++..+.+.+|..
T Consensus        28 ~~~l~sasrDk~ii~W~L~~dd~~~G~~~r~~~GHsH-~v~dv~~s~dg~~alS~swD~~lrlWDl~~g~~t~~f~GH~~  106 (315)
T KOG0279|consen   28 SDILVSASRDKTIIVWKLTSDDIKYGVPVRRLTGHSH-FVSDVVLSSDGNFALSASWDGTLRLWDLATGESTRRFVGHTK  106 (315)
T ss_pred             CceEEEcccceEEEEEEeccCccccCceeeeeeccce-EecceEEccCCceEEeccccceEEEEEecCCcEEEEEEecCC
Confidence            46788899999999998753     778999999999 999999999999999999999999999999998888999999


Q ss_pred             ceEEEEECCCCCEEEE-ecCCeEEEEEccCCceEEEeccc--CCCeEEEEEecC--CCEEEEecCCCeEEEeecCcccee
Q psy10867         80 RISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATASSH--YQPITIVKWSAD--SNFIVTGGEDGTICVWQLSRLICK  154 (343)
Q Consensus        80 ~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~--~~~v~~~~~~~~--~~~l~s~~~dg~i~iwd~~~~~~~  154 (343)
                      .|.+++|+||.+.+++ +.|.+|++|+...+ +..++..+  .+.|.|++|+|+  ..+|++++.|++|++||+++.+  
T Consensus       107 dVlsva~s~dn~qivSGSrDkTiklwnt~g~-ck~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~--  183 (315)
T KOG0279|consen  107 DVLSVAFSTDNRQIVSGSRDKTIKLWNTLGV-CKYTIHEDSHREWVSCVRFSPNESNPIIVSASWDKTVKVWNLRNCQ--  183 (315)
T ss_pred             ceEEEEecCCCceeecCCCcceeeeeeeccc-EEEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCceEEEEccCCcc--
Confidence            9999999999999998 68999999998654 44444433  789999999997  6799999999999999999864  


Q ss_pred             eeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCCcEEEEEE
Q psy10867        155 QTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAF  234 (343)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~  234 (343)
                                          ....+.+|...++.++++|||  .+.++|+.||.+.+||++.++.+..+.+...|.+++|
T Consensus       184 --------------------l~~~~~gh~~~v~t~~vSpDG--slcasGgkdg~~~LwdL~~~k~lysl~a~~~v~sl~f  241 (315)
T KOG0279|consen  184 --------------------LRTTFIGHSGYVNTVTVSPDG--SLCASGGKDGEAMLWDLNEGKNLYSLEAFDIVNSLCF  241 (315)
T ss_pred             --------------------hhhccccccccEEEEEECCCC--CEEecCCCCceEEEEEccCCceeEeccCCCeEeeEEe
Confidence                                445567899999999999999  8999999999999999999999999999999999999


Q ss_pred             cCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecc
Q psy10867        235 DGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTI  309 (343)
Q Consensus       235 ~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~  309 (343)
                      +|+.-.|+.+. +..|+|||+.......++......+  ..+.....-.+++|++||..|++|-.|+.|++|.+.
T Consensus       242 spnrywL~~at-~~sIkIwdl~~~~~v~~l~~d~~g~--s~~~~~~~clslaws~dG~tLf~g~td~~irv~qv~  313 (315)
T KOG0279|consen  242 SPNRYWLCAAT-ATSIKIWDLESKAVVEELKLDGIGP--SSKAGDPICLSLAWSADGQTLFAGYTDNVIRVWQVA  313 (315)
T ss_pred             cCCceeEeecc-CCceEEEeccchhhhhhcccccccc--ccccCCcEEEEEEEcCCCcEEEeeecCCcEEEEEee
Confidence            99877777665 4459999999877666554322222  122223345678999999999999999999999875

>KOG0279|consensus

Probab=100.00  E-value=2.1e-45  Score=267.76  Aligned_cols=280  Identities=18%  Similarity=0.176  Sum_probs=237.5

Q ss_pred             ceEEEEEecCCCCcceEEEEeCC-ceEEEEEcCCCeEEEEeCCC-----cccceecccCCcceEEEEECCCCCEEEE-ec
Q psy10867         25 GTLLMSYKGASVLSPHSMCLLGN-DYVLGVEKGKPMIQAWPVNS-----QEKAQLRLICPGRISSMQASPDAAYIAV-SI   97 (343)
Q Consensus        25 ~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~i~iw~~~~-----~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~   97 (343)
                      .....++++|.+ .|+.++..+. ..++..++.|..+.+|++..     |..++.+.+|...|..+..++||++..+ +.
T Consensus         5 l~l~~tl~gh~d-~Vt~la~~~~~~~~l~sasrDk~ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~dg~~alS~sw   83 (315)
T KOG0279|consen    5 LVLRGTLEGHTD-WVTALAIKIKNSDILVSASRDKTIIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSSDGNFALSASW   83 (315)
T ss_pred             heeeeeecCCCc-eEEEEEeecCCCceEEEcccceEEEEEEeccCccccCceeeeeeccceEecceEEccCCceEEeccc
Confidence            345667999999 9999999986 47888888889999998765     3445777899999999999999999887 79


Q ss_pred             CCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceee
Q psy10867         98 ETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLH  177 (343)
Q Consensus        98 d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (343)
                      |+.+++||+.+++..+.|.+|...|.+++|++|.+++++|+.|.+|++|+.-.....                     ..
T Consensus        84 D~~lrlWDl~~g~~t~~f~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~g~ck~---------------------t~  142 (315)
T KOG0279|consen   84 DGTLRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTLGVCKY---------------------TI  142 (315)
T ss_pred             cceEEEEEecCCcEEEEEEecCCceEEEEecCCCceeecCCCcceeeeeeecccEEE---------------------EE
Confidence            999999999999999999999999999999999999999999999999999765211                     11


Q ss_pred             eecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEee
Q psy10867        178 VKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLR  256 (343)
Q Consensus       178 ~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~  256 (343)
                      .-..+...|.|++|+|+..+.++++++.|+++++||+++-+....+. |.+.++.++++|||..+++|+.||.+.+||++
T Consensus       143 ~~~~~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~l~~~~~gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~  222 (315)
T KOG0279|consen  143 HEDSHREWVSCVRFSPNESNPIIVSASWDKTVKVWNLRNCQLRTTFIGHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLN  222 (315)
T ss_pred             ecCCCcCcEEEEEEcCCCCCcEEEEccCCceEEEEccCCcchhhccccccccEEEEEECCCCCEEecCCCCceEEEEEcc
Confidence            11223789999999999645899999999999999999998887776 78889999999999999999999999999999


Q ss_pred             cccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc--cC--------CceEEE
Q psy10867        257 QVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ--HK--------GPVLGA  326 (343)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~--~~--------~~v~~~  326 (343)
                      ..+...           . .+|...|.+++|+|+.-.|+.+. +..|+|||++++.++..++  ..        ....++
T Consensus       223 ~~k~ly-----------s-l~a~~~v~sl~fspnrywL~~at-~~sIkIwdl~~~~~v~~l~~d~~g~s~~~~~~~clsl  289 (315)
T KOG0279|consen  223 EGKNLY-----------S-LEAFDIVNSLCFSPNRYWLCAAT-ATSIKIWDLESKAVVEELKLDGIGPSSKAGDPICLSL  289 (315)
T ss_pred             CCceeE-----------e-ccCCCeEeeEEecCCceeEeecc-CCceEEEeccchhhhhhccccccccccccCCcEEEEE
Confidence            866532           2 35788999999999976666554 4569999999999888876  11        224678


Q ss_pred             EEccCCCeeeecc
Q psy10867        327 FLGLLPPAIHDYD  339 (343)
Q Consensus       327 ~~sp~~~~l~~~~  339 (343)
                      +|++||+.|+++-
T Consensus       290 aws~dG~tLf~g~  302 (315)
T KOG0279|consen  290 AWSADGQTLFAGY  302 (315)
T ss_pred             EEcCCCcEEEeee
Confidence            9999999999864

>KOG0315|consensus

Probab=100.00  E-value=2e-45  Score=263.81  Aligned_cols=264  Identities=19%  Similarity=0.258  Sum_probs=233.5

Q ss_pred             ceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEEecCCeEEEEEccCCc--eEEEecccCCCeEEE
Q psy10867         48 DYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSGR--LLATASSHYQPITIV  125 (343)
Q Consensus        48 ~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~--~~~~~~~~~~~v~~~  125 (343)
                      .-+|++++.|.+||+|...+|.+........+.|+.+...||++.||++....|++||++++.  ++.++.+|++.|..+
T Consensus        10 ~viLvsA~YDhTIRfWqa~tG~C~rTiqh~dsqVNrLeiTpdk~~LAaa~~qhvRlyD~~S~np~Pv~t~e~h~kNVtaV   89 (311)
T KOG0315|consen   10 PVILVSAGYDHTIRFWQALTGICSRTIQHPDSQVNRLEITPDKKDLAAAGNQHVRLYDLNSNNPNPVATFEGHTKNVTAV   89 (311)
T ss_pred             ceEEEeccCcceeeeeehhcCeEEEEEecCccceeeEEEcCCcchhhhccCCeeEEEEccCCCCCceeEEeccCCceEEE
Confidence            468888888899999999999999988888889999999999999999989999999999875  588999999999999


Q ss_pred             EEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeC
Q psy10867        126 KWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSH  205 (343)
Q Consensus       126 ~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~  205 (343)
                      .|..+|+.+++|++||+++|||++...+.+                       ...|..+|+++..+|+.  ..|+++..
T Consensus        90 gF~~dgrWMyTgseDgt~kIWdlR~~~~qR-----------------------~~~~~spVn~vvlhpnQ--teLis~dq  144 (311)
T KOG0315|consen   90 GFQCDGRWMYTGSEDGTVKIWDLRSLSCQR-----------------------NYQHNSPVNTVVLHPNQ--TELISGDQ  144 (311)
T ss_pred             EEeecCeEEEecCCCceEEEEeccCcccch-----------------------hccCCCCcceEEecCCc--ceEEeecC
Confidence            999999999999999999999999964433                       34588999999999998  78999999


Q ss_pred             CCeEEEEecCCCceEEEee--cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEE
Q psy10867        206 DRTCKIFDLCTGEDLLSLI--LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVT  283 (343)
Q Consensus       206 d~~i~~wd~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  283 (343)
                      +|.|++||+.+..+...+.  ....+.++...|+|.+|+.+...|..++|++-......+     ..++..++.|++.+.
T Consensus       145 sg~irvWDl~~~~c~~~liPe~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~-----l~P~~k~~ah~~~il  219 (311)
T KOG0315|consen  145 SGNIRVWDLGENSCTHELIPEDDTSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTASE-----LEPVHKFQAHNGHIL  219 (311)
T ss_pred             CCcEEEEEccCCccccccCCCCCcceeeEEEcCCCcEEEEecCCccEEEEEccCCCcccc-----ceEhhheecccceEE
Confidence            9999999999887666554  456799999999999999999999999999987433322     345777999999999


Q ss_pred             EEEEccCCCEEEEEeCCCcEEEEecccc-eeeeecc-cCCceEEEEEccCCCeeeecccC
Q psy10867        284 SLSCSITGITLLSSSADETLKIWHTISR-QCLRTIQ-HKGPVLGAFLGLLPPAIHDYDFT  341 (343)
Q Consensus       284 ~~~~s~~~~~l~s~~~dg~i~iwd~~~~-~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~~  341 (343)
                      .+.+|||+++||++|.|.+++||+.++. +....++ |...+++++||.||+||++++-.
T Consensus       220 ~C~lSPd~k~lat~ssdktv~iwn~~~~~kle~~l~gh~rWvWdc~FS~dg~YlvTassd  279 (311)
T KOG0315|consen  220 RCLLSPDVKYLATCSSDKTVKIWNTDDFFKLELVLTGHQRWVWDCAFSADGEYLVTASSD  279 (311)
T ss_pred             EEEECCCCcEEEeecCCceEEEEecCCceeeEEEeecCCceEEeeeeccCccEEEecCCC
Confidence            9999999999999999999999999887 4445555 88899999999999999999753

>KOG0318|consensus

Probab=100.00  E-value=1.8e-43  Score=278.71  Aligned_cols=313  Identities=17%  Similarity=0.225  Sum_probs=260.2

Q ss_pred             CeEEEEecCCceEEEEEecCCCCcceEEEEeCCc-eEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEE
Q psy10867         15 GAISVWEPKGGTLLMSYKGASVLSPHSMCLLGND-YVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYI   93 (343)
Q Consensus        15 g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l   93 (343)
                      |.+.+||  +|.-+..+.+|.. .|.+++|-|.. ..++++++|++|.+|+-...+.......|..-|++++|+|||.++
T Consensus       129 g~~F~~D--SG~SvGei~GhSr-~ins~~~KpsRPfRi~T~sdDn~v~ffeGPPFKFk~s~r~HskFV~~VRysPDG~~F  205 (603)
T KOG0318|consen  129 GHVFLWD--SGNSVGEITGHSR-RINSVDFKPSRPFRIATGSDDNTVAFFEGPPFKFKSSFREHSKFVNCVRYSPDGSRF  205 (603)
T ss_pred             eEEEEec--CCCccceeeccce-eEeeeeccCCCceEEEeccCCCeEEEeeCCCeeeeecccccccceeeEEECCCCCeE
Confidence            4556666  7888999999999 99999999976 667888888999999977777777777899999999999999999


Q ss_pred             EE-ecCCeEEEEEccCCceEEEec---ccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCC---
Q psy10867         94 AV-SIETKLHMWQISSGRLLATAS---SHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSG---  166 (343)
Q Consensus        94 ~~-~~d~~i~v~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~---  166 (343)
                      ++ +.||.+.+||-.+|+.+..+.   +|.+.|.++.|+||+.++++++.|.+++|||+.+.++.+++.++......   
T Consensus       206 at~gsDgki~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqvG  285 (603)
T KOG0318|consen  206 ATAGSDGKIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQQVG  285 (603)
T ss_pred             EEecCCccEEEEcCCCccEEEEecCCCCccccEEEEEECCCCceEEEecCCceEEEEEeeccceEEEeecCCchhceEEE
Confidence            97 899999999999999999998   89999999999999999999999999999999999988888765431100   


Q ss_pred             -------------Cc-----cccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceE--------
Q psy10867        167 -------------KG-----VTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDL--------  220 (343)
Q Consensus       167 -------------~~-----~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~--------  220 (343)
                                   .+     ......++..+.+|...|+++..+|++  .+|++|+.||.|.-||..++..-        
T Consensus       286 ~lWqkd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~--~~i~SgsyDG~I~~W~~~~g~~~~~~g~~h~  363 (603)
T KOG0318|consen  286 CLWQKDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVSPDG--KTIYSGSYDGHINSWDSGSGTSDRLAGKGHT  363 (603)
T ss_pred             EEEeCCeEEEEEcCcEEEEecccCCChhheecccccceeEEEEcCCC--CEEEeeccCceEEEEecCCcccccccccccc
Confidence                         00     011223778889999999999999999  89999999999999998643210        


Q ss_pred             -----------------------EEe------------------------------------------e---------cC
Q psy10867        221 -----------------------LSL------------------------------------------I---------LD  226 (343)
Q Consensus       221 -----------------------~~~------------------------------------------~---------~~  226 (343)
                                             +.+                                          +         ..
T Consensus       364 nqI~~~~~~~~~~~~t~g~Dd~l~~~~~~~~~~t~~~~~~lg~QP~~lav~~d~~~avv~~~~~iv~l~~~~~~~~~~~~  443 (603)
T KOG0318|consen  364 NQIKGMAASESGELFTIGWDDTLRVISLKDNGYTKSEVVKLGSQPKGLAVLSDGGTAVVACISDIVLLQDQTKVSSIPIG  443 (603)
T ss_pred             ceEEEEeecCCCcEEEEecCCeEEEEecccCcccccceeecCCCceeEEEcCCCCEEEEEecCcEEEEecCCcceeeccc
Confidence                                   000                                          0         01


Q ss_pred             CcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEE
Q psy10867        227 TRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIW  306 (343)
Q Consensus       227 ~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw  306 (343)
                      -...+++++|++..+++|+.|+.|++|.+.......         ......|.++|+++++|||+.+||++...+.+.+|
T Consensus       444 y~~s~vAv~~~~~~vaVGG~Dgkvhvysl~g~~l~e---------e~~~~~h~a~iT~vaySpd~~yla~~Da~rkvv~y  514 (603)
T KOG0318|consen  444 YESSAVAVSPDGSEVAVGGQDGKVHVYSLSGDELKE---------EAKLLEHRAAITDVAYSPDGAYLAAGDASRKVVLY  514 (603)
T ss_pred             cccceEEEcCCCCEEEEecccceEEEEEecCCcccc---------eeeeecccCCceEEEECCCCcEEEEeccCCcEEEE
Confidence            124578899999999999999999999998754322         23456799999999999999999999999999999


Q ss_pred             ecccceeeee-cc-cCCceEEEEEccCCCeeeecccC
Q psy10867        307 HTISRQCLRT-IQ-HKGPVLGAFLGLLPPAIHDYDFT  341 (343)
Q Consensus       307 d~~~~~~~~~-~~-~~~~v~~~~~sp~~~~l~~~~~~  341 (343)
                      |+.+++.... .. |...|.+++|+|+.++++++++.
T Consensus       515 d~~s~~~~~~~w~FHtakI~~~aWsP~n~~vATGSlD  551 (603)
T KOG0318|consen  515 DVASREVKTNRWAFHTAKINCVAWSPNNKLVATGSLD  551 (603)
T ss_pred             EcccCceecceeeeeeeeEEEEEeCCCceEEEecccc
Confidence            9998876222 22 99999999999999999999875

>KOG0263|consensus

Probab=100.00  E-value=1.8e-44  Score=297.38  Aligned_cols=280  Identities=20%  Similarity=0.332  Sum_probs=245.5

Q ss_pred             EEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcc-------------------------------cceecc
Q psy10867         27 LLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQE-------------------------------KAQLRL   75 (343)
Q Consensus        27 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~-------------------------------~~~~~~   75 (343)
                      +..++..... .++|..|++|+.++|.|..|..|++|.+...+                               ..+.+.
T Consensus       370 c~YT~~nt~~-~v~ca~fSddssmlA~Gf~dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~~~~~~~L~  448 (707)
T KOG0263|consen  370 CMYTFHNTYQ-GVTCAEFSDDSSMLACGFVDSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDSSGTSRTLY  448 (707)
T ss_pred             EEEEEEEcCC-cceeEeecCCcchhhccccccEEEEEecchhhhccccchhhhccccccccchhhhhccccCCceeEEee
Confidence            3445554455 89999999999999999999999999987421                               012356


Q ss_pred             cCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCcccee
Q psy10867         76 ICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICK  154 (343)
Q Consensus        76 ~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~  154 (343)
                      +|.++|....|+|+.++|++ +.|+++++|.+.+..++..+++|..+|.++.|+|.|-++||++.|++.++|.....   
T Consensus       449 GH~GPVyg~sFsPd~rfLlScSED~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~GyYFatas~D~tArLWs~d~~---  525 (707)
T KOG0263|consen  449 GHSGPVYGCSFSPDRRFLLSCSEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAPRGYYFATASHDQTARLWSTDHN---  525 (707)
T ss_pred             cCCCceeeeeecccccceeeccCCcceeeeecccceeEEEecCCCcceeeEEecCCceEEEecCCCceeeeeecccC---
Confidence            89999999999999999997 67899999999999999999999999999999999999999999999999998874   


Q ss_pred             eeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEE
Q psy10867        155 QTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVA  233 (343)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~  233 (343)
                                         .+++.+.+|...|.|+.|+|+.  .++++||.|.++|+||+.+|..++.|. |.++|.+++
T Consensus       526 -------------------~PlRifaghlsDV~cv~FHPNs--~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH~~~V~al~  584 (707)
T KOG0263|consen  526 -------------------KPLRIFAGHLSDVDCVSFHPNS--NYVATGSSDRTVRLWDVSTGNSVRIFTGHKGPVTALA  584 (707)
T ss_pred             -------------------CchhhhcccccccceEEECCcc--cccccCCCCceEEEEEcCCCcEEEEecCCCCceEEEE
Confidence                               3788889999999999999999  899999999999999999999999988 889999999


Q ss_pred             EcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccce-
Q psy10867        234 FDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQ-  312 (343)
Q Consensus       234 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~-  312 (343)
                      |+|+|++|++|+.||.|.+||+.+...           +..+.+|.+.|.++.|+.||..||+|+.|++|++||+..-. 
T Consensus       585 ~Sp~Gr~LaSg~ed~~I~iWDl~~~~~-----------v~~l~~Ht~ti~SlsFS~dg~vLasgg~DnsV~lWD~~~~~~  653 (707)
T KOG0263|consen  585 FSPCGRYLASGDEDGLIKIWDLANGSL-----------VKQLKGHTGTIYSLSFSRDGNVLASGGADNSVRLWDLTKVIE  653 (707)
T ss_pred             EcCCCceEeecccCCcEEEEEcCCCcc-----------hhhhhcccCceeEEEEecCCCEEEecCCCCeEEEEEchhhcc
Confidence            999999999999999999999998544           66788999999999999999999999999999999986322 


Q ss_pred             -----------------------eeeecc-cCCceEEEEEccCCCeeeecccCC
Q psy10867        313 -----------------------CLRTIQ-HKGPVLGAFLGLLPPAIHDYDFTP  342 (343)
Q Consensus       313 -----------------------~~~~~~-~~~~v~~~~~sp~~~~l~~~~~~~  342 (343)
                                             ++..+. ...+|..+.|..-...|+.+.+.|
T Consensus       654 ~~~~~~~~~~~~~~~~~~~~~~~llgs~~tK~tpv~~l~FtrrNl~L~~g~~~~  707 (707)
T KOG0263|consen  654 LLNLGHISTSNSAITQENNASSLLLGSFYTKNTPVVGLHFTRRNLLLAVGPFEP  707 (707)
T ss_pred             cccccccccccccccccCCCCcceeeeeeecCceEEEEEEeccceeEEecccCC
Confidence                                   333444 456788999998877777776653

>KOG0295|consensus

Probab=100.00  E-value=4e-44  Score=270.20  Aligned_cols=279  Identities=18%  Similarity=0.264  Sum_probs=254.6

Q ss_pred             EEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-ecCCeEEEEE
Q psy10867         27 LLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQ  105 (343)
Q Consensus        27 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~  105 (343)
                      ..+.+.+|.. +|+.+-|+|+-.+++++++|++|++||..+++....+.+|.+.+..++|+..|++|++ +.|-.+++||
T Consensus       100 l~~~l~g~r~-~vt~v~~hp~~~~v~~as~d~tikv~D~~tg~~e~~LrGHt~sv~di~~~a~Gk~l~tcSsDl~~~LWd  178 (406)
T KOG0295|consen  100 LVQKLAGHRS-SVTRVIFHPSEALVVSASEDATIKVFDTETGELERSLRGHTDSVFDISFDASGKYLATCSSDLSAKLWD  178 (406)
T ss_pred             chhhhhcccc-ceeeeeeccCceEEEEecCCceEEEEEccchhhhhhhhccccceeEEEEecCccEEEecCCccchhhee
Confidence            3455677887 9999999999999999999999999999999999999999999999999999999998 5666799999


Q ss_pred             ccC-CceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeeccccc
Q psy10867        106 ISS-GRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSL  184 (343)
Q Consensus       106 ~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (343)
                      .++ .++++.+.+|...|.+++|-|.|.++++++.|.+|+.|++.++.                      .+..+.+|..
T Consensus       179 ~~~~~~c~ks~~gh~h~vS~V~f~P~gd~ilS~srD~tik~We~~tg~----------------------cv~t~~~h~e  236 (406)
T KOG0295|consen  179 FDTFFRCIKSLIGHEHGVSSVFFLPLGDHILSCSRDNTIKAWECDTGY----------------------CVKTFPGHSE  236 (406)
T ss_pred             HHHHHHHHHHhcCcccceeeEEEEecCCeeeecccccceeEEecccce----------------------eEEeccCchH
Confidence            986 46677888999999999999999999999999999999999986                      4556678999


Q ss_pred             ceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCC---------------CCEEEEEcCCC
Q psy10867        185 PVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGT---------------EDNIYMGTSEG  248 (343)
Q Consensus       185 ~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~---------------~~~l~~~~~d~  248 (343)
                      .|..++.+.||  .++++++.|.++++|-+.++++...+. |+.++.+++|.|.               +.++.+++.|+
T Consensus       237 wvr~v~v~~DG--ti~As~s~dqtl~vW~~~t~~~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDk  314 (406)
T KOG0295|consen  237 WVRMVRVNQDG--TIIASCSNDQTLRVWVVATKQCKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDK  314 (406)
T ss_pred             hEEEEEecCCe--eEEEecCCCceEEEEEeccchhhhhhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccc
Confidence            99999999999  899999999999999999998877776 7888999999773               25899999999


Q ss_pred             cEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc-cCCceEEEE
Q psy10867        249 VIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVLGAF  327 (343)
Q Consensus       249 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~  327 (343)
                      +|++||+.++           .++.++.+|..+|..++|+|.|+||+++..|+++++||+.++++..++. |..-++++.
T Consensus       315 tIk~wdv~tg-----------~cL~tL~ghdnwVr~~af~p~Gkyi~ScaDDktlrvwdl~~~~cmk~~~ah~hfvt~lD  383 (406)
T KOG0295|consen  315 TIKIWDVSTG-----------MCLFTLVGHDNWVRGVAFSPGGKYILSCADDKTLRVWDLKNLQCMKTLEAHEHFVTSLD  383 (406)
T ss_pred             eEEEEeccCC-----------eEEEEEecccceeeeeEEcCCCeEEEEEecCCcEEEEEeccceeeeccCCCcceeEEEe
Confidence            9999999985           4477899999999999999999999999999999999999999999999 999999999


Q ss_pred             EccCCCeeeecccC
Q psy10867        328 LGLLPPAIHDYDFT  341 (343)
Q Consensus       328 ~sp~~~~l~~~~~~  341 (343)
                      |+.+..++++|++.
T Consensus       384 fh~~~p~VvTGsVd  397 (406)
T KOG0295|consen  384 FHKTAPYVVTGSVD  397 (406)
T ss_pred             cCCCCceEEecccc
Confidence            99999999999875

>KOG0284|consensus

Probab=100.00  E-value=1.6e-44  Score=276.17  Aligned_cols=267  Identities=19%  Similarity=0.228  Sum_probs=239.0

Q ss_pred             cceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEEe-cCCeEEEEEccCCceEEEec
Q psy10867         38 SPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVS-IETKLHMWQISSGRLLATAS  116 (343)
Q Consensus        38 ~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~d~~i~v~~~~~~~~~~~~~  116 (343)
                      .|..+.|.|+|+-|.+|+..|.+.+|+..+-....++..|..+|.++.|++++.+++++ .+|.|++|+.+-.. ++.+.
T Consensus        98 ~V~~v~WtPeGRRLltgs~SGEFtLWNg~~fnFEtilQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpnmnn-Vk~~~  176 (464)
T KOG0284|consen   98 PVNVVRWTPEGRRLLTGSQSGEFTLWNGTSFNFETILQAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQPNMNN-VKIIQ  176 (464)
T ss_pred             ceeeEEEcCCCceeEeecccccEEEecCceeeHHHHhhhhcccceeEEEccCCCEEEEcCCCceEEecccchhh-hHHhh
Confidence            88999999999888888888999999987766667778999999999999999999985 57899999976544 44455


Q ss_pred             c-cCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCC
Q psy10867        117 S-HYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLG  195 (343)
Q Consensus       117 ~-~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  195 (343)
                      + |...|++++|+|+...|++++.||+|+|||....+                      +...+.+|.-.|.+++|+|..
T Consensus       177 ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~k----------------------ee~vL~GHgwdVksvdWHP~k  234 (464)
T KOG0284|consen  177 AHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPK----------------------EERVLRGHGWDVKSVDWHPTK  234 (464)
T ss_pred             HhhhhhhheeccCCCCceeEEecCCCeEEEEeccCCc----------------------hhheeccCCCCcceeccCCcc
Confidence            5 44899999999999999999999999999998753                      445668999999999999998


Q ss_pred             CceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCc
Q psy10867        196 AKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPD  274 (343)
Q Consensus       196 ~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~  274 (343)
                        .++++++.|..|++||.++++++.++. |...|..+.|+|++++|++++.|..++++|++.++.           +..
T Consensus       235 --gLiasgskDnlVKlWDprSg~cl~tlh~HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR~mkE-----------l~~  301 (464)
T KOG0284|consen  235 --GLIASGSKDNLVKLWDPRSGSCLATLHGHKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIRTMKE-----------LFT  301 (464)
T ss_pred             --ceeEEccCCceeEeecCCCcchhhhhhhccceEEEEEEcCCCCeeEEccCCceEEEEehhHhHH-----------HHH
Confidence              799999999999999999999999887 788899999999999999999999999999997554           667


Q ss_pred             cccccCcEEEEEEcc-CCCEEEEEeCCCcEEEEecccceeeeecc--cCCceEEEEEccCCCeeeeccc
Q psy10867        275 FIGHEKQVTSLSCSI-TGITLLSSSADETLKIWHTISRQCLRTIQ--HKGPVLGAFLGLLPPAIHDYDF  340 (343)
Q Consensus       275 ~~~~~~~v~~~~~s~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~--~~~~v~~~~~sp~~~~l~~~~~  340 (343)
                      +++|+..++++.|+| ...+|.+|+.||.|..|.+...+++..+.  |...|++++|+|-|..|++++-
T Consensus       302 ~r~Hkkdv~~~~WhP~~~~lftsgg~Dgsvvh~~v~~~~p~~~i~~AHd~~iwsl~~hPlGhil~tgsn  370 (464)
T KOG0284|consen  302 YRGHKKDVTSLTWHPLNESLFTSGGSDGSVVHWVVGLEEPLGEIPPAHDGEIWSLAYHPLGHILATGSN  370 (464)
T ss_pred             hhcchhhheeeccccccccceeeccCCCceEEEeccccccccCCCcccccceeeeeccccceeEeecCC
Confidence            899999999999999 45688999999999999998778888887  9999999999999999999874

>KOG0295|consensus

Probab=100.00  E-value=3.7e-43  Score=264.99  Aligned_cols=273  Identities=22%  Similarity=0.309  Sum_probs=248.6

Q ss_pred             cccceEEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCC-cccceecccCCcc
Q psy10867          2 SLLNEVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNS-QEKAQLRLICPGR   80 (343)
Q Consensus         2 ~~v~~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~-~~~~~~~~~~~~~   80 (343)
                      .|...+.++++.|++|++||..+|++...+++|.+ ++..++|+..|+++++++.|=.+++||.++ .++++...+|...
T Consensus       117 hp~~~~v~~as~d~tikv~D~~tg~~e~~LrGHt~-sv~di~~~a~Gk~l~tcSsDl~~~LWd~~~~~~c~ks~~gh~h~  195 (406)
T KOG0295|consen  117 HPSEALVVSASEDATIKVFDTETGELERSLRGHTD-SVFDISFDASGKYLATCSSDLSAKLWDFDTFFRCIKSLIGHEHG  195 (406)
T ss_pred             ccCceEEEEecCCceEEEEEccchhhhhhhhcccc-ceeEEEEecCccEEEecCCccchhheeHHHHHHHHHHhcCcccc
Confidence            35667888999999999999999999999999999 999999999999999999987799999987 5666778899999


Q ss_pred             eEEEEECCCCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeec
Q psy10867         81 ISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAF  159 (343)
Q Consensus        81 v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~  159 (343)
                      |.++.|-|.|.++++ +.|.+|+.|++.+|-++.++.+|...|..++.+.||..+++++.|.++++|-+.++.+      
T Consensus       196 vS~V~f~P~gd~ilS~srD~tik~We~~tg~cv~t~~~h~ewvr~v~v~~DGti~As~s~dqtl~vW~~~t~~~------  269 (406)
T KOG0295|consen  196 VSSVFFLPLGDHILSCSRDNTIKAWECDTGYCVKTFPGHSEWVRMVRVNQDGTIIASCSNDQTLRVWVVATKQC------  269 (406)
T ss_pred             eeeEEEEecCCeeeecccccceeEEecccceeEEeccCchHhEEEEEecCCeeEEEecCCCceEEEEEeccchh------
Confidence            999999999999997 7899999999999999999999999999999999999999999999999999998753      


Q ss_pred             CCCCCCCCccccccceeeeecccccceEEEEeecCCC-------------ceEEEEeeCCCeEEEEecCCCceEEEee-c
Q psy10867        160 GIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGA-------------KSRVASVSHDRTCKIFDLCTGEDLLSLI-L  225 (343)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-------------~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~  225 (343)
                                      ...++.|..+|.+++|.|...             .+++.+++.|++|++||+.++.++.++. |
T Consensus       270 ----------------k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~gh  333 (406)
T KOG0295|consen  270 ----------------KAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVGH  333 (406)
T ss_pred             ----------------hhhhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEEEEecc
Confidence                            445568999999999977531             2589999999999999999999999988 8


Q ss_pred             CCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEE
Q psy10867        226 DTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKI  305 (343)
Q Consensus       226 ~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~i  305 (343)
                      .+.|..++|+|.|+||+++..|+++++||+++...           ...+..|..-++++.|+.+..++++|+-|..+++
T Consensus       334 dnwVr~~af~p~Gkyi~ScaDDktlrvwdl~~~~c-----------mk~~~ah~hfvt~lDfh~~~p~VvTGsVdqt~Kv  402 (406)
T KOG0295|consen  334 DNWVRGVAFSPGGKYILSCADDKTLRVWDLKNLQC-----------MKTLEAHEHFVTSLDFHKTAPYVVTGSVDQTVKV  402 (406)
T ss_pred             cceeeeeEEcCCCeEEEEEecCCcEEEEEecccee-----------eeccCCCcceeEEEecCCCCceEEeccccceeee
Confidence            89999999999999999999999999999998544           5566789999999999999999999999999999


Q ss_pred             Eec
Q psy10867        306 WHT  308 (343)
Q Consensus       306 wd~  308 (343)
                      |.-
T Consensus       403 wEc  405 (406)
T KOG0295|consen  403 WEC  405 (406)
T ss_pred             eec
Confidence            974

>KOG0273|consensus

Probab=100.00  E-value=2.5e-42  Score=268.76  Aligned_cols=295  Identities=18%  Similarity=0.231  Sum_probs=253.8

Q ss_pred             EEEecCCCCeEEEEecCC--ce--EEEEEe---------cCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCccccee
Q psy10867          7 VAFSYDGSGAISVWEPKG--GT--LLMSYK---------GASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQL   73 (343)
Q Consensus         7 ~~~s~~~dg~i~iwd~~~--~~--~~~~~~---------~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~   73 (343)
                      +..+++++-..++|++..  ..  ....++         ......|++++|+.+|.+||+|..+|.++||+... ..+..
T Consensus       193 llasg~~~s~ari~~l~e~~~~~~~q~~lrh~~~~~~~s~~~nkdVT~L~Wn~~G~~LatG~~~G~~riw~~~G-~l~~t  271 (524)
T KOG0273|consen  193 LLASGSGDSTARIWNLLENSNIGSTQLVLRHCIREGGKSVPSNKDVTSLDWNNDGTLLATGSEDGEARIWNKDG-NLIST  271 (524)
T ss_pred             hhhccCCccceeeeeehhhccccchhhhhhhhhhhhcccCCccCCcceEEecCCCCeEEEeecCcEEEEEecCc-hhhhh
Confidence            455666677889999864  11  111111         11122899999999999999999999999999764 45677


Q ss_pred             cccCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccc
Q psy10867         74 RLICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLI  152 (343)
Q Consensus        74 ~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~  152 (343)
                      +..|.++|.++.|+.+|.+|++ +.|+++.+||..+|+..+.+.-|..+-..+.|-. ...+++++.||.|+++.+....
T Consensus       272 l~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g~~~q~f~~~s~~~lDVdW~~-~~~F~ts~td~~i~V~kv~~~~  350 (524)
T KOG0273|consen  272 LGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTGTVKQQFEFHSAPALDVDWQS-NDEFATSSTDGCIHVCKVGEDR  350 (524)
T ss_pred             hhccCCceEEEEEcCCCCEEEeccCCccEEEEeccCceEEEeeeeccCCccceEEec-CceEeecCCCceEEEEEecCCC
Confidence            8899999999999999999997 7899999999999999999999988878899974 4578999999999999998753


Q ss_pred             eeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEE
Q psy10867        153 CKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTC  231 (343)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~  231 (343)
                                            |...+.+|.++|.++.|+|.+  .+|++++.|+++++|..........+. |...|..
T Consensus       351 ----------------------P~~t~~GH~g~V~alk~n~tg--~LLaS~SdD~TlkiWs~~~~~~~~~l~~Hskei~t  406 (524)
T KOG0273|consen  351 ----------------------PVKTFIGHHGEVNALKWNPTG--SLLASCSDDGTLKIWSMGQSNSVHDLQAHSKEIYT  406 (524)
T ss_pred             ----------------------cceeeecccCceEEEEECCCC--ceEEEecCCCeeEeeecCCCcchhhhhhhccceee
Confidence                                  677778999999999999999  899999999999999988887777776 7788999


Q ss_pred             EEEcCCC---------CEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCc
Q psy10867        232 VAFDGTE---------DNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADET  302 (343)
Q Consensus       232 ~~~~~~~---------~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~  302 (343)
                      +.|+|.|         ..+++++.|++|++||+..+.           ++..+..|..+|++++|+|+|+++|+|+.||.
T Consensus       407 ~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv-----------~i~~f~kH~~pVysvafS~~g~ylAsGs~dg~  475 (524)
T KOG0273|consen  407 IKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGV-----------PIHTLMKHQEPVYSVAFSPNGRYLASGSLDGC  475 (524)
T ss_pred             EeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCc-----------eeEeeccCCCceEEEEecCCCcEEEecCCCCe
Confidence            9999964         468999999999999998754           36678889999999999999999999999999


Q ss_pred             EEEEecccceeeeecccCCceEEEEEccCCCeeeec
Q psy10867        303 LKIWHTISRQCLRTIQHKGPVLGAFLGLLPPAIHDY  338 (343)
Q Consensus       303 i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~  338 (343)
                      |.+|++++++.++.+...+.|..++|+.+|.+|.++
T Consensus       476 V~iws~~~~~l~~s~~~~~~Ifel~Wn~~G~kl~~~  511 (524)
T KOG0273|consen  476 VHIWSTKTGKLVKSYQGTGGIFELCWNAAGDKLGAC  511 (524)
T ss_pred             eEeccccchheeEeecCCCeEEEEEEcCCCCEEEEE
Confidence            999999999999999988889999999999887654

>KOG0284|consensus

Probab=100.00  E-value=2.6e-43  Score=269.55  Aligned_cols=271  Identities=19%  Similarity=0.311  Sum_probs=233.8

Q ss_pred             ccceEEEecCC--------CCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceec
Q psy10867          3 LLNEVAFSYDG--------SGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLR   74 (343)
Q Consensus         3 ~v~~~~~s~~~--------dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~   74 (343)
                      +|+.+.++|+|        .|.+.+|+..+-.....++.|+. +|+++.|++++.++++|+.+|.|++|+..-.......
T Consensus        98 ~V~~v~WtPeGRRLltgs~SGEFtLWNg~~fnFEtilQaHDs-~Vr~m~ws~~g~wmiSgD~gG~iKyWqpnmnnVk~~~  176 (464)
T KOG0284|consen   98 PVNVVRWTPEGRRLLTGSQSGEFTLWNGTSFNFETILQAHDS-PVRTMKWSHNGTWMISGDKGGMIKYWQPNMNNVKIIQ  176 (464)
T ss_pred             ceeeEEEcCCCceeEeecccccEEEecCceeeHHHHhhhhcc-cceeEEEccCCCEEEEcCCCceEEecccchhhhHHhh
Confidence            56677777775        68899999855555555778999 9999999999999999999999999998765544444


Q ss_pred             ccCCcceEEEEECCCCCEEE-EecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccce
Q psy10867         75 LICPGRISSMQASPDAAYIA-VSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLIC  153 (343)
Q Consensus        75 ~~~~~~v~~~~~s~~~~~l~-~~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~  153 (343)
                      ..|...|.+++|+|+...++ ++.||+|+|||....+....+.+|.-.|.+++|+|...++++|+.|..|++||.+++.+
T Consensus       177 ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~kee~vL~GHgwdVksvdWHP~kgLiasgskDnlVKlWDprSg~c  256 (464)
T KOG0284|consen  177 AHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPKEERVLRGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDPRSGSC  256 (464)
T ss_pred             HhhhhhhheeccCCCCceeEEecCCCeEEEEeccCCchhheeccCCCCcceeccCCccceeEEccCCceeEeecCCCcch
Confidence            45668999999999665555 58899999999998888888999999999999999999999999999999999999864


Q ss_pred             eeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEE
Q psy10867        154 KQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCV  232 (343)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~  232 (343)
                                            +..+..|+..|..+.|+|++  ++|+++|.|..++++|+++.+.+..++ |...++++
T Consensus       257 ----------------------l~tlh~HKntVl~~~f~~n~--N~Llt~skD~~~kv~DiR~mkEl~~~r~Hkkdv~~~  312 (464)
T KOG0284|consen  257 ----------------------LATLHGHKNTVLAVKFNPNG--NWLLTGSKDQSCKVFDIRTMKELFTYRGHKKDVTSL  312 (464)
T ss_pred             ----------------------hhhhhhccceEEEEEEcCCC--CeeEEccCCceEEEEehhHhHHHHHhhcchhhheee
Confidence                                  45566899999999999999  899999999999999999988888888 88899999


Q ss_pred             EEcCC-CCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEec
Q psy10867        233 AFDGT-EDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHT  308 (343)
Q Consensus       233 ~~~~~-~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~  308 (343)
                      .|+|- ..+|.+|+.||.|..|.+...+..          ...-.+|...|++++|+|-|.+|++|+.|.++++|.-
T Consensus       313 ~WhP~~~~lftsgg~Dgsvvh~~v~~~~p~----------~~i~~AHd~~iwsl~~hPlGhil~tgsnd~t~rfw~r  379 (464)
T KOG0284|consen  313 TWHPLNESLFTSGGSDGSVVHWVVGLEEPL----------GEIPPAHDGEIWSLAYHPLGHILATGSNDRTVRFWTR  379 (464)
T ss_pred             ccccccccceeeccCCCceEEEeccccccc----------cCCCcccccceeeeeccccceeEeecCCCcceeeecc
Confidence            99995 567788999999999998843322          2223579999999999999999999999999999974

>KOG0316|consensus

Probab=100.00  E-value=2.2e-41  Score=241.21  Aligned_cols=277  Identities=12%  Similarity=0.158  Sum_probs=245.5

Q ss_pred             EEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-ecCCeEEEEE
Q psy10867         27 LLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQ  105 (343)
Q Consensus        27 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~  105 (343)
                      .++.+..+++ +|.++.|+-+|.+..++..|.+|++|+...+.+++...+|..+|..++.+.|+..+++ |.|..+.+||
T Consensus         9 r~~~l~~~qg-aV~avryN~dGnY~ltcGsdrtvrLWNp~rg~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vwD   87 (307)
T KOG0316|consen    9 RLSILDCAQG-AVRAVRYNVDGNYCLTCGSDRTVRLWNPLRGALIKTYSGHGHEVLDAALSSDNSKFASCGGDKAVQVWD   87 (307)
T ss_pred             hceeeccccc-ceEEEEEccCCCEEEEcCCCceEEeecccccceeeeecCCCceeeeccccccccccccCCCCceEEEEE
Confidence            4667888999 9999999999988888888899999999999999999999999999999999888886 7899999999


Q ss_pred             ccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccc
Q psy10867        106 ISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLP  185 (343)
Q Consensus       106 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (343)
                      +++|+..+.+.+|.+.|+.++|+.+...+++|+.|.++++||.++..                    .+|++.+......
T Consensus        88 V~TGkv~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s--------------------~ePiQildea~D~  147 (307)
T KOG0316|consen   88 VNTGKVDRRFRGHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRS--------------------FEPIQILDEAKDG  147 (307)
T ss_pred             cccCeeeeecccccceeeEEEecCcceEEEeccccceeEEEEcccCC--------------------CCccchhhhhcCc
Confidence            99999999999999999999999999999999999999999999864                    3588888889999


Q ss_pred             eEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeeccccccccc
Q psy10867        186 VTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHH  265 (343)
Q Consensus       186 v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~  265 (343)
                      |.++.+..    ..+++|+.||+++.||++.|+.... ....+|++++|+++++..++++.|+++++.|-.+++.     
T Consensus       148 V~Si~v~~----heIvaGS~DGtvRtydiR~G~l~sD-y~g~pit~vs~s~d~nc~La~~l~stlrLlDk~tGkl-----  217 (307)
T KOG0316|consen  148 VSSIDVAE----HEIVAGSVDGTVRTYDIRKGTLSSD-YFGHPITSVSFSKDGNCSLASSLDSTLRLLDKETGKL-----  217 (307)
T ss_pred             eeEEEecc----cEEEeeccCCcEEEEEeecceeehh-hcCCcceeEEecCCCCEEEEeeccceeeecccchhHH-----
Confidence            99999876    5699999999999999999876443 2578999999999999999999999999999888655     


Q ss_pred             ccCCCCCCccccccCcEEE--EEEccCCCEEEEEeCCCcEEEEecccceeeeecc-cCCc-eEEEEEccCCCeeeeccc
Q psy10867        266 IQDSTSNPDFIGHEKQVTS--LSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-HKGP-VLGAFLGLLPPAIHDYDF  340 (343)
Q Consensus       266 ~~~~~~~~~~~~~~~~v~~--~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~-v~~~~~sp~~~~l~~~~~  340 (343)
                            +..+++|...-..  ++++.....+++|++||.|++||+.....+..+. +... ++++.++|.-..|+++.-
T Consensus       218 ------L~sYkGhkn~eykldc~l~qsdthV~sgSEDG~Vy~wdLvd~~~~sk~~~~~~v~v~dl~~hp~~~~f~~A~~  290 (307)
T KOG0316|consen  218 ------LKSYKGHKNMEYKLDCCLNQSDTHVFSGSEDGKVYFWDLVDETQISKLSVVSTVIVTDLSCHPTMDDFITATG  290 (307)
T ss_pred             ------HHHhcccccceeeeeeeecccceeEEeccCCceEEEEEeccceeeeeeccCCceeEEeeecccCccceeEecC
Confidence                  5567888776544  4566667799999999999999999999999999 5555 799999999888887654

>KOG0296|consensus

Probab=100.00  E-value=5.6e-41  Score=253.37  Aligned_cols=303  Identities=18%  Similarity=0.178  Sum_probs=261.1

Q ss_pred             cccceEEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcce
Q psy10867          2 SLLNEVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRI   81 (343)
Q Consensus         2 ~~v~~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v   81 (343)
                      .|-+.++.++++|..-.+|+..+|+....+.+|++ .|+++.|+.+|.++|+|+-+|.|+||...++.....+......+
T Consensus        73 ~P~~~l~aTGGgDD~AflW~~~~ge~~~eltgHKD-SVt~~~FshdgtlLATGdmsG~v~v~~~stg~~~~~~~~e~~di  151 (399)
T KOG0296|consen   73 HPNNNLVATGGGDDLAFLWDISTGEFAGELTGHKD-SVTCCSFSHDGTLLATGDMSGKVLVFKVSTGGEQWKLDQEVEDI  151 (399)
T ss_pred             CCCCceEEecCCCceEEEEEccCCcceeEecCCCC-ceEEEEEccCceEEEecCCCccEEEEEcccCceEEEeecccCce
Confidence            45567888999999999999999999999999999 99999999999999999999999999999998877666667789


Q ss_pred             EEEEECCCCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecC
Q psy10867         82 SSMQASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFG  160 (343)
Q Consensus        82 ~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~  160 (343)
                      .-+.|+|.+.+|++ +.||.+.+|.+.++...+.+.+|..++++-.|.|+|+.++++..||+|++|++.++.+...+.  
T Consensus       152 eWl~WHp~a~illAG~~DGsvWmw~ip~~~~~kv~~Gh~~~ct~G~f~pdGKr~~tgy~dgti~~Wn~ktg~p~~~~~--  229 (399)
T KOG0296|consen  152 EWLKWHPRAHILLAGSTDGSVWMWQIPSQALCKVMSGHNSPCTCGEFIPDGKRILTGYDDGTIIVWNPKTGQPLHKIT--  229 (399)
T ss_pred             EEEEecccccEEEeecCCCcEEEEECCCcceeeEecCCCCCcccccccCCCceEEEEecCceEEEEecCCCceeEEec--
Confidence            99999999988886 689999999999988889999999999999999999999999999999999999986544332  


Q ss_pred             CCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee---------cCCcEEE
Q psy10867        161 IPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI---------LDTRLTC  231 (343)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~---------~~~~i~~  231 (343)
                                         ........++.++..+  ..++.|+.++.+++-+..+++.+....         +...+.+
T Consensus       230 -------------------~~e~~~~~~~~~~~~~--~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~~es  288 (399)
T KOG0296|consen  230 -------------------QAEGLELPCISLNLAG--STLTKGNSEGVACGVNNGSGKVVNCNNGTVPELKPSQEELDES  288 (399)
T ss_pred             -------------------ccccCcCCcccccccc--ceeEeccCCccEEEEccccceEEEecCCCCccccccchhhhhh
Confidence                               1224456788888888  789999999999999988888776554         2233444


Q ss_pred             ---EEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEec
Q psy10867        232 ---VAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHT  308 (343)
Q Consensus       232 ---~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~  308 (343)
                         +.++..-.+.|+|+-||+|.|||+.....            +..-.|...|+.+.|-+ ..+|++++.||.|+.||.
T Consensus       289 ve~~~~ss~lpL~A~G~vdG~i~iyD~a~~~~------------R~~c~he~~V~~l~w~~-t~~l~t~c~~g~v~~wDa  355 (399)
T KOG0296|consen  289 VESIPSSSKLPLAACGSVDGTIAIYDLAASTL------------RHICEHEDGVTKLKWLN-TDYLLTACANGKVRQWDA  355 (399)
T ss_pred             hhhcccccccchhhcccccceEEEEecccchh------------heeccCCCceEEEEEcC-cchheeeccCceEEeeec
Confidence               44555567889999999999999987542            23445888999999998 689999999999999999


Q ss_pred             ccceeeeecc-cCCceEEEEEccCCCeeeecccC
Q psy10867        309 ISRQCLRTIQ-HKGPVLGAFLGLLPPAIHDYDFT  341 (343)
Q Consensus       309 ~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~~  341 (343)
                      ++|+++.++. |..+|.+++++|+.+++++++-.
T Consensus       356 RtG~l~~~y~GH~~~Il~f~ls~~~~~vvT~s~D  389 (399)
T KOG0296|consen  356 RTGQLKFTYTGHQMGILDFALSPQKRLVVTVSDD  389 (399)
T ss_pred             cccceEEEEecCchheeEEEEcCCCcEEEEecCC
Confidence            9999999999 99999999999999999998754

>KOG0265|consensus

Probab=100.00  E-value=1.7e-41  Score=249.93  Aligned_cols=282  Identities=18%  Similarity=0.279  Sum_probs=243.0

Q ss_pred             EEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCc-ccceecccCCcceEEEEECCCCCEEEE-ecCCeEEEEE
Q psy10867         28 LMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQ-EKAQLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQ  105 (343)
Q Consensus        28 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~-~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~  105 (343)
                      +-.+.+|++ .|..+.|+|+|.++++|+.|..|.+|++... +....+.+|.+.|..+.|.+|++.+++ +.|.+++.||
T Consensus        40 ~m~l~gh~g-eI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~wD  118 (338)
T KOG0265|consen   40 IMLLPGHKG-EIYTIKFHPDGSCFASGGSDRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGSHILSCGTDKTVRGWD  118 (338)
T ss_pred             hhhcCCCcc-eEEEEEECCCCCeEeecCCcceEEEEeccccccceeeeccccceeEeeeeccCCCEEEEecCCceEEEEe
Confidence            445788999 9999999999999999999999999996543 334666799999999999999998886 7899999999


Q ss_pred             ccCCceEEEecccCCCeEEEEEecCC-CEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeeccccc
Q psy10867        106 ISSGRLLATASSHYQPITIVKWSADS-NFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSL  184 (343)
Q Consensus       106 ~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (343)
                      .++|+....+++|.+-|..+.-+.-| .++.+++.||++++||+++...++++                       ..+.
T Consensus       119 ~~tG~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~-----------------------~~ky  175 (338)
T KOG0265|consen  119 AETGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTF-----------------------ENKY  175 (338)
T ss_pred             cccceeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccchhhcc-----------------------ccce
Confidence            99999999999999999998854433 46778899999999999987655443                       2566


Q ss_pred             ceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeeccccccc
Q psy10867        185 PVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRD  263 (343)
Q Consensus       185 ~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~  263 (343)
                      +++++.|...+  ..+.+|+-|+.|++||++....+..+. |..+|+.+..+|+|.++.+-+.|.++++||++.......
T Consensus       176 qltAv~f~d~s--~qv~sggIdn~ikvWd~r~~d~~~~lsGh~DtIt~lsls~~gs~llsnsMd~tvrvwd~rp~~p~~R  253 (338)
T KOG0265|consen  176 QLTAVGFKDTS--DQVISGGIDNDIKVWDLRKNDGLYTLSGHADTITGLSLSRYGSFLLSNSMDNTVRVWDVRPFAPSQR  253 (338)
T ss_pred             eEEEEEecccc--cceeeccccCceeeeccccCcceEEeecccCceeeEEeccCCCccccccccceEEEEEecccCCCCc
Confidence            78999999988  789999999999999999999988887 788999999999999999999999999999997654332


Q ss_pred             ccccCCCCCCccccccC----cEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc-cCCceEEEEEccCCCeeeec
Q psy10867        264 HHIQDSTSNPDFIGHEK----QVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVLGAFLGLLPPAIHDY  338 (343)
Q Consensus       264 ~~~~~~~~~~~~~~~~~----~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~  338 (343)
                             ++..+.+|..    ....++|+|+++.+.+|+.|..+++||......+..+. |.+.|.+++|+|....|.++
T Consensus       254 -------~v~if~g~~hnfeknlL~cswsp~~~~i~ags~dr~vyvwd~~~r~~lyklpGh~gsvn~~~Fhp~e~iils~  326 (338)
T KOG0265|consen  254 -------CVKIFQGHIHNFEKNLLKCSWSPNGTKITAGSADRFVYVWDTTSRRILYKLPGHYGSVNEVDFHPTEPIILSC  326 (338)
T ss_pred             -------eEEEeecchhhhhhhcceeeccCCCCccccccccceEEEeecccccEEEEcCCcceeEEEeeecCCCcEEEEe
Confidence                   2444555432    34567899999999999999999999999889999998 99999999999999999998


Q ss_pred             ccCC
Q psy10867        339 DFTP  342 (343)
Q Consensus       339 ~~~~  342 (343)
                      +...
T Consensus       327 ~sdk  330 (338)
T KOG0265|consen  327 SSDK  330 (338)
T ss_pred             ccCc
Confidence            7653

>KOG0319|consensus

Probab=100.00  E-value=7.5e-42  Score=279.71  Aligned_cols=306  Identities=22%  Similarity=0.324  Sum_probs=252.7

Q ss_pred             ceEEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCc--eEEEEEcCCCeEEEEeCCCccc-ceecccCCcce
Q psy10867          5 NEVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGND--YVLGVEKGKPMIQAWPVNSQEK-AQLRLICPGRI   81 (343)
Q Consensus         5 ~~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~~~~~~~~~i~iw~~~~~~~-~~~~~~~~~~v   81 (343)
                      ..++.+++.||.++|||+..+.+.+.|++|.+ .|.++.|+|+-  .++++|..|+++++||+.+... +.....|.+.|
T Consensus       117 g~LlAtggaD~~v~VWdi~~~~~th~fkG~gG-vVssl~F~~~~~~~lL~sg~~D~~v~vwnl~~~~tcl~~~~~H~S~v  195 (775)
T KOG0319|consen  117 GTLLATGGADGRVKVWDIKNGYCTHSFKGHGG-VVSSLLFHPHWNRWLLASGATDGTVRVWNLNDKRTCLHTMILHKSAV  195 (775)
T ss_pred             CceEEeccccceEEEEEeeCCEEEEEecCCCc-eEEEEEeCCccchhheeecCCCceEEEEEcccCchHHHHHHhhhhhe
Confidence            35566666799999999999999999999999 99999999974  6788999999999999996554 67788999999


Q ss_pred             EEEEECCCCCEEEE-ecCCeEEEEEccCCce-------------------------------------------------
Q psy10867         82 SSMQASPDAAYIAV-SIETKLHMWQISSGRL-------------------------------------------------  111 (343)
Q Consensus        82 ~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~-------------------------------------------------  111 (343)
                      ++++|++|+.-+++ |.|..+.+||+.+.+.                                                 
T Consensus       196 tsL~~~~d~~~~ls~~RDkvi~vwd~~~~~~l~~lp~ye~~E~vv~l~~~~~~~~~~~~TaG~~g~~~~~d~es~~~~~~  275 (775)
T KOG0319|consen  196 TSLAFSEDSLELLSVGRDKVIIVWDLVQYKKLKTLPLYESLESVVRLREELGGKGEYIITAGGSGVVQYWDSESGKCVYK  275 (775)
T ss_pred             eeeeeccCCceEEEeccCcEEEEeehhhhhhhheechhhheeeEEEechhcCCcceEEEEecCCceEEEEecccchhhhh
Confidence            99999999876664 8899999998651100                                                 


Q ss_pred             --------------------------------------------------------------------------------
Q psy10867        112 --------------------------------------------------------------------------------  111 (343)
Q Consensus       112 --------------------------------------------------------------------------------  111 (343)
                                                                                                      
T Consensus       276 ~~~~~~~e~~~~~~~~~~~~~l~vtaeQnl~l~d~~~l~i~k~ivG~ndEI~Dm~~lG~e~~~laVATNs~~lr~y~~~~  355 (775)
T KOG0319|consen  276 QRQSDSEEIDHLLAIESMSQLLLVTAEQNLFLYDEDELTIVKQIVGYNDEILDMKFLGPEESHLAVATNSPELRLYTLPT  355 (775)
T ss_pred             hccCCchhhhcceeccccCceEEEEccceEEEEEccccEEehhhcCCchhheeeeecCCccceEEEEeCCCceEEEecCC
Confidence                                                                                            


Q ss_pred             --EEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEE
Q psy10867        112 --LATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHV  189 (343)
Q Consensus       112 --~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  189 (343)
                        -+.+.+|+..|.++....+|.+|++|+.|.++++|.++......                  .++....+|...|.++
T Consensus       356 ~~c~ii~GH~e~vlSL~~~~~g~llat~sKD~svilWr~~~~~~~~------------------~~~a~~~gH~~svgav  417 (775)
T KOG0319|consen  356 SYCQIIPGHTEAVLSLDVWSSGDLLATGSKDKSVILWRLNNNCSKS------------------LCVAQANGHTNSVGAV  417 (775)
T ss_pred             CceEEEeCchhheeeeeecccCcEEEEecCCceEEEEEecCCcchh------------------hhhhhhccccccccee
Confidence              00114666667777744566788888888888888774432211                  2556667899999999


Q ss_pred             EeecCCCceEEEEeeCCCeEEEEecCCCceE---EE-------eecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeeccc
Q psy10867        190 TLSKLGAKSRVASVSHDRTCKIFDLCTGEDL---LS-------LILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVP  259 (343)
Q Consensus       190 ~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~---~~-------~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~  259 (343)
                      +++..+. .+|+++|.|+++++|++...+..   ..       ..|+..|++++++|+.+++++|+.|.+.+||++....
T Consensus       418 a~~~~~a-sffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~ndkLiAT~SqDktaKiW~le~~~  496 (775)
T KOG0319|consen  418 AGSKLGA-SFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAPNDKLIATGSQDKTAKIWDLEQLR  496 (775)
T ss_pred             eecccCc-cEEEEecCCceEEEecCCCcccccccceehhhHHHHhhcccccceEecCCCceEEecccccceeeecccCce
Confidence            9988776 89999999999999999862211   11       1278889999999999999999999999999998533


Q ss_pred             ccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc-cCCceEEEEEccCCCeeeec
Q psy10867        260 RTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVLGAFLGLLPPAIHDY  338 (343)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~  338 (343)
                      .           ...+.+|...|.++.|+|..+.++++|.|++|+||.+.++.++.+|+ |...|..+.|-.+|+.|+++
T Consensus       497 l-----------~~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~fSClkT~eGH~~aVlra~F~~~~~qliS~  565 (775)
T KOG0319|consen  497 L-----------LGVLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTFSCLKTFEGHTSAVLRASFIRNGKQLISA  565 (775)
T ss_pred             E-----------EEEeeCCccceEEEEeccccceeEeccCCceEEEEEeccceeeeeecCccceeEeeeeeeCCcEEEec
Confidence            2           66789999999999999999999999999999999999999999999 99999999999999999998


Q ss_pred             ccC
Q psy10867        339 DFT  341 (343)
Q Consensus       339 ~~~  341 (343)
                      +..
T Consensus       566 ~ad  568 (775)
T KOG0319|consen  566 GAD  568 (775)
T ss_pred             cCC
Confidence            753

>KOG0291|consensus

Probab=100.00  E-value=5.3e-40  Score=269.66  Aligned_cols=301  Identities=17%  Similarity=0.205  Sum_probs=259.4

Q ss_pred             eEEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCC-CeEEEEeCCCcccceecccCCcceEEE
Q psy10867          6 EVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGK-PMIQAWPVNSQEKAQLRLICPGRISSM   84 (343)
Q Consensus         6 ~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-~~i~iw~~~~~~~~~~~~~~~~~v~~~   84 (343)
                      .+++++=..|...++++..-.+++.+.-... .|..++|+..|..+|.|+.. |.+-+|++++...+....+|...++++
T Consensus       278 ~~lvvgFssG~f~LyelP~f~lih~LSis~~-~I~t~~~N~tGDWiA~g~~klgQLlVweWqsEsYVlKQQgH~~~i~~l  356 (893)
T KOG0291|consen  278 NLLVVGFSSGEFGLYELPDFNLIHSLSISDQ-KILTVSFNSTGDWIAFGCSKLGQLLVWEWQSESYVLKQQGHSDRITSL  356 (893)
T ss_pred             eEEEEEecCCeeEEEecCCceEEEEeecccc-eeeEEEecccCCEEEEcCCccceEEEEEeeccceeeeccccccceeeE
Confidence            4555666689999999999999999998887 99999999999888887763 699999999998888888999999999


Q ss_pred             EECCCCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCC
Q psy10867         85 QASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPG  163 (343)
Q Consensus        85 ~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~  163 (343)
                      +++|||+++|+ +.||.|+|||..+|-+..++..|++.|+.++|+..++.+++.+-||+|+.||+.....-+++..    
T Consensus       357 ~YSpDgq~iaTG~eDgKVKvWn~~SgfC~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNfRTft~----  432 (893)
T KOG0291|consen  357 AYSPDGQLIATGAEDGKVKVWNTQSGFCFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNFRTFTS----  432 (893)
T ss_pred             EECCCCcEEEeccCCCcEEEEeccCceEEEEeccCCCceEEEEEEecCCEEEEeecCCeEEeeeecccceeeeecC----
Confidence            99999999998 6899999999999999999999999999999999999999999999999999998876665541    


Q ss_pred             CCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCC-eEEEEecCCCceEEEee-cCCcEEEEEEcCCCCEE
Q psy10867        164 SSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDR-TCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNI  241 (343)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~-~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l  241 (343)
                                       .......|++..|.|  .++.+|+.|. .|.+|++++|+.+-.+. |+++|.+++|+|.+..|
T Consensus       433 -----------------P~p~QfscvavD~sG--elV~AG~~d~F~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~~~~L  493 (893)
T KOG0291|consen  433 -----------------PEPIQFSCVAVDPSG--ELVCAGAQDSFEIFVWSVQTGQLLDILSGHEGPVSGLSFSPDGSLL  493 (893)
T ss_pred             -----------------CCceeeeEEEEcCCC--CEEEeeccceEEEEEEEeecCeeeehhcCCCCcceeeEEccccCeE
Confidence                             233456788999988  7888888775 59999999999998887 89999999999999999


Q ss_pred             EEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc---
Q psy10867        242 YMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ---  318 (343)
Q Consensus       242 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~---  318 (343)
                      ++++.|.+|++||+-.....          +.++ .+...+..++|+|+|+.|++++.||.|.+||...+..+..++   
T Consensus       494 aS~SWDkTVRiW~if~s~~~----------vEtl-~i~sdvl~vsfrPdG~elaVaTldgqItf~d~~~~~q~~~Idgrk  562 (893)
T KOG0291|consen  494 ASGSWDKTVRIWDIFSSSGT----------VETL-EIRSDVLAVSFRPDGKELAVATLDGQITFFDIKEAVQVGSIDGRK  562 (893)
T ss_pred             EeccccceEEEEEeeccCce----------eeeE-eeccceeEEEEcCCCCeEEEEEecceEEEEEhhhceeeccccchh
Confidence            99999999999998764322          1222 356789999999999999999999999999998765553332   


Q ss_pred             ------------------cCCceEEEEEccCCCeeeecccC
Q psy10867        319 ------------------HKGPVLGAFLGLLPPAIHDYDFT  341 (343)
Q Consensus       319 ------------------~~~~v~~~~~sp~~~~l~~~~~~  341 (343)
                                        ....++.+.+|+||..|++++-.
T Consensus       563 D~~~gR~~~D~~ta~~sa~~K~Ftti~ySaDG~~IlAgG~s  603 (893)
T KOG0291|consen  563 DLSGGRKETDRITAENSAKGKTFTTICYSADGKCILAGGES  603 (893)
T ss_pred             hccccccccceeehhhcccCCceEEEEEcCCCCEEEecCCc
Confidence                              12568899999999999998754

>KOG0266|consensus

Probab=100.00  E-value=1.2e-40  Score=280.54  Aligned_cols=279  Identities=23%  Similarity=0.336  Sum_probs=242.2

Q ss_pred             EEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcc--cceecccCCcceEEEEECCCCCEEEE-ecCCeEEEE
Q psy10867         28 LMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQE--KAQLRLICPGRISSMQASPDAAYIAV-SIETKLHMW  104 (343)
Q Consensus        28 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~--~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~  104 (343)
                      ...+..+....|.++.|+|+|..+++++.++.+++|+....+  ..+.+.+|...|..++|+|+++++++ +.|++|++|
T Consensus       151 ~~~~~~~~~~sv~~~~fs~~g~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~D~tiriw  230 (456)
T KOG0266|consen  151 EQTLAGHECPSVTCVDFSPDGRALAAASSDGLIRIWKLEGIKSNLLRELSGHTRGVSDVAFSPDGSYLLSGSDDKTLRIW  230 (456)
T ss_pred             eeeecccccCceEEEEEcCCCCeEEEccCCCcEEEeecccccchhhccccccccceeeeEECCCCcEEEEecCCceEEEe
Confidence            444555533389999999999999999888999999997777  56666789999999999999999997 688999999


Q ss_pred             Ec-cCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccc
Q psy10867        105 QI-SSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHS  183 (343)
Q Consensus       105 ~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (343)
                      |+ ..+..++++++|...|++++|+|+++++++|+.|++|++||+++++                      +...+.+|.
T Consensus       231 d~~~~~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~----------------------~~~~l~~hs  288 (456)
T KOG0266|consen  231 DLKDDGRNLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGE----------------------CVRKLKGHS  288 (456)
T ss_pred             eccCCCeEEEEecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccCCe----------------------EEEeeeccC
Confidence            99 5558899999999999999999999999999999999999999864                      666778999


Q ss_pred             cceEEEEeecCCCceEEEEeeCCCeEEEEecCCCc--eEEEee-cCC--cEEEEEEcCCCCEEEEEcCCCcEEEEEeecc
Q psy10867        184 LPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGE--DLLSLI-LDT--RLTCVAFDGTEDNIYMGTSEGVIKSFCLRQV  258 (343)
Q Consensus       184 ~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~--~~~~~~-~~~--~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~  258 (343)
                      ..|++++|++++  .++++++.|+.|++||+.++.  +...+. +..  ++++++|+|+++++++++.|+.+++||+...
T Consensus       289 ~~is~~~f~~d~--~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d~~~~~w~l~~~  366 (456)
T KOG0266|consen  289 DGISGLAFSPDG--NLLVSASYDGTIRVWDLETGSKLCLKLLSGAENSAPVTSVQFSPNGKYLLSASLDRTLKLWDLRSG  366 (456)
T ss_pred             CceEEEEECCCC--CEEEEcCCCccEEEEECCCCceeeeecccCCCCCCceeEEEECCCCcEEEEecCCCeEEEEEccCC
Confidence            999999999999  899999999999999999998  445544 222  6899999999999999999999999999986


Q ss_pred             cccccccccCCCCCCccccccC---cEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc-c-CCceEEEEEccCCC
Q psy10867        259 PRTRDHHIQDSTSNPDFIGHEK---QVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-H-KGPVLGAFLGLLPP  333 (343)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~---~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~-~~~v~~~~~sp~~~  333 (343)
                      ....           .+.+|..   .+.+...++.+.++++|+.|+.|++||+.++..+..+. | ...+..+.++|..+
T Consensus       367 ~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~i~sg~~d~~v~~~~~~s~~~~~~l~~h~~~~~~~~~~~~~~~  435 (456)
T KOG0266|consen  367 KSVG-----------TYTGHSNLVRCIFSPTLSTGGKLIYSGSEDGSVYVWDSSSGGILQRLEGHSKAAVSDLSSHPTEN  435 (456)
T ss_pred             ccee-----------eecccCCcceeEecccccCCCCeEEEEeCCceEEEEeCCccchhhhhcCCCCCceeccccCCCcC
Confidence            5533           4455555   34445567899999999999999999999999999998 8 88999999999999


Q ss_pred             eeeecccC
Q psy10867        334 AIHDYDFT  341 (343)
Q Consensus       334 ~l~~~~~~  341 (343)
                      +++++++.
T Consensus       436 ~~~s~s~~  443 (456)
T KOG0266|consen  436 LIASSSFE  443 (456)
T ss_pred             eeeecCcC
Confidence            99998854

>KOG0291|consensus

Probab=100.00  E-value=1.6e-40  Score=272.73  Aligned_cols=290  Identities=18%  Similarity=0.298  Sum_probs=246.8

Q ss_pred             ccceEEEecCCC---------CeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCccccee
Q psy10867          3 LLNEVAFSYDGS---------GAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQL   73 (343)
Q Consensus         3 ~v~~~~~s~~~d---------g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~   73 (343)
                      +|..+.|+..||         |.+-||++.+...+...++|.. .+.+++++|||+++++|.+||.|+|||..++-+..+
T Consensus       309 ~I~t~~~N~tGDWiA~g~~klgQLlVweWqsEsYVlKQQgH~~-~i~~l~YSpDgq~iaTG~eDgKVKvWn~~SgfC~vT  387 (893)
T KOG0291|consen  309 KILTVSFNSTGDWIAFGCSKLGQLLVWEWQSESYVLKQQGHSD-RITSLAYSPDGQLIATGAEDGKVKVWNTQSGFCFVT  387 (893)
T ss_pred             eeeEEEecccCCEEEEcCCccceEEEEEeeccceeeecccccc-ceeeEEECCCCcEEEeccCCCcEEEEeccCceEEEE
Confidence            566777776665         7999999999999999999999 999999999999999999999999999999999999


Q ss_pred             cccCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCCceEEEecccC-CCeEEEEEecCCCEEEEecCCC-eEEEeecCc
Q psy10867         74 RLICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATASSHY-QPITIVKWSADSNFIVTGGEDG-TICVWQLSR  150 (343)
Q Consensus        74 ~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~s~~~dg-~i~iwd~~~  150 (343)
                      +..|...|+.+.|+..++.+.+ +-||+|+.||+...+..+++.... -...|++..|.|..++.|+.|. .|.+|++++
T Consensus       388 FteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNfRTft~P~p~QfscvavD~sGelV~AG~~d~F~IfvWS~qT  467 (893)
T KOG0291|consen  388 FTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNFRTFTSPEPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQT  467 (893)
T ss_pred             eccCCCceEEEEEEecCCEEEEeecCCeEEeeeecccceeeeecCCCceeeeEEEEcCCCCEEEeeccceEEEEEEEeec
Confidence            9999999999999999998887 789999999999999888887532 3467888889999999999876 699999999


Q ss_pred             cceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCC-ceEEEeecCCcE
Q psy10867        151 LICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTG-EDLLSLILDTRL  229 (343)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~-~~~~~~~~~~~i  229 (343)
                      ++                      .+..+.+|.++|.+++|+|.+  ..|+++|.|.+|++||+-.. ..+.++.....+
T Consensus       468 Gq----------------------llDiLsGHEgPVs~l~f~~~~--~~LaS~SWDkTVRiW~if~s~~~vEtl~i~sdv  523 (893)
T KOG0291|consen  468 GQ----------------------LLDILSGHEGPVSGLSFSPDG--SLLASGSWDKTVRIWDIFSSSGTVETLEIRSDV  523 (893)
T ss_pred             Ce----------------------eeehhcCCCCcceeeEEcccc--CeEEeccccceEEEEEeeccCceeeeEeeccce
Confidence            85                      566778999999999999999  89999999999999998644 456777889999


Q ss_pred             EEEEEcCCCCEEEEEcCCCcEEEEEeeccccccccc----ccCCCC-----CCccccccCcEEEEEEccCCCEEEEEeCC
Q psy10867        230 TCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHH----IQDSTS-----NPDFIGHEKQVTSLSCSITGITLLSSSAD  300 (343)
Q Consensus       230 ~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~----~~~~~~-----~~~~~~~~~~v~~~~~s~~~~~l~s~~~d  300 (343)
                      ..++|.|+|+.|++++-||.|.+||.........+.    +..+..     ...-.......+.+++++||..+++|+..
T Consensus       524 l~vsfrPdG~elaVaTldgqItf~d~~~~~q~~~IdgrkD~~~gR~~~D~~ta~~sa~~K~Ftti~ySaDG~~IlAgG~s  603 (893)
T KOG0291|consen  524 LAVSFRPDGKELAVATLDGQITFFDIKEAVQVGSIDGRKDLSGGRKETDRITAENSAKGKTFTTICYSADGKCILAGGES  603 (893)
T ss_pred             eEEEEcCCCCeEEEEEecceEEEEEhhhceeeccccchhhccccccccceeehhhcccCCceEEEEEcCCCCEEEecCCc
Confidence            999999999999999999999999998765543221    111111     11111234678999999999999999999


Q ss_pred             CcEEEEecccceeeeec
Q psy10867        301 ETLKIWHTISRQCLRTI  317 (343)
Q Consensus       301 g~i~iwd~~~~~~~~~~  317 (343)
                      ..|++|++.++-.++.|
T Consensus       604 n~iCiY~v~~~vllkkf  620 (893)
T KOG0291|consen  604 NSICIYDVPEGVLLKKF  620 (893)
T ss_pred             ccEEEEECchhheeeeE
Confidence            99999999887665543

>KOG0285|consensus

Probab=100.00  E-value=2.2e-41  Score=255.18  Aligned_cols=278  Identities=17%  Similarity=0.281  Sum_probs=249.4

Q ss_pred             ceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-ecCCeEEE
Q psy10867         25 GTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SIETKLHM  103 (343)
Q Consensus        25 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v  103 (343)
                      .+..+.+++|.+ .|+|+++.|.+.++++|+.|++++|||+.+++....+.+|...|..+++|+-..||.+ +.|+.|+.
T Consensus       141 wKl~rVi~gHlg-WVr~vavdP~n~wf~tgs~DrtikIwDlatg~LkltltGhi~~vr~vavS~rHpYlFs~gedk~VKC  219 (460)
T KOG0285|consen  141 WKLYRVISGHLG-WVRSVAVDPGNEWFATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLFSAGEDKQVKC  219 (460)
T ss_pred             ceehhhhhhccc-eEEEEeeCCCceeEEecCCCceeEEEEcccCeEEEeecchhheeeeeeecccCceEEEecCCCeeEE
Confidence            455677899999 9999999999999999999999999999999999999999999999999999999987 78999999


Q ss_pred             EEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccc
Q psy10867        104 WQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHS  183 (343)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (343)
                      ||++..+.++.+.+|-+.|+|++.+|.-+.|++|+.|.++++||+++..                      .+..+.+|.
T Consensus       220 wDLe~nkvIR~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~----------------------~V~~l~GH~  277 (460)
T KOG0285|consen  220 WDLEYNKVIRHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRA----------------------SVHVLSGHT  277 (460)
T ss_pred             EechhhhhHHHhccccceeEEEeccccceeEEecCCcceEEEeeecccc----------------------eEEEecCCC
Confidence            9999999999999999999999999999999999999999999999964                      677788999


Q ss_pred             cceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccc
Q psy10867        184 LPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTR  262 (343)
Q Consensus       184 ~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~  262 (343)
                      .+|..+.+.|..  ..+++|+.|++|++||++.++....+. |...+.+++.+|....+++++.|. |+-|++..+..  
T Consensus       278 ~~V~~V~~~~~d--pqvit~S~D~tvrlWDl~agkt~~tlt~hkksvral~lhP~e~~fASas~dn-ik~w~~p~g~f--  352 (460)
T KOG0285|consen  278 NPVASVMCQPTD--PQVITGSHDSTVRLWDLRAGKTMITLTHHKKSVRALCLHPKENLFASASPDN-IKQWKLPEGEF--  352 (460)
T ss_pred             CcceeEEeecCC--CceEEecCCceEEEeeeccCceeEeeecccceeeEEecCCchhhhhccCCcc-ceeccCCccch--
Confidence            999999999887  689999999999999999999988877 677899999999999999888764 88898876543  


Q ss_pred             cccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc---------cCCceEEEEEccCCC
Q psy10867        263 DHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ---------HKGPVLGAFLGLLPP  333 (343)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~---------~~~~v~~~~~sp~~~  333 (343)
                               +..+.+|+..|++++...|+ ++++|+.+|.+.+||.++|...+.+.         .+..|.+.+|...|.
T Consensus       353 ---------~~nlsgh~~iintl~~nsD~-v~~~G~dng~~~fwdwksg~nyQ~~~t~vqpGSl~sEagI~as~fDktg~  422 (460)
T KOG0285|consen  353 ---------LQNLSGHNAIINTLSVNSDG-VLVSGGDNGSIMFWDWKSGHNYQRGQTIVQPGSLESEAGIFASCFDKTGS  422 (460)
T ss_pred             ---------hhccccccceeeeeeeccCc-eEEEcCCceEEEEEecCcCcccccccccccCCccccccceeEEeecccCc
Confidence                     55688999999999988775 78999999999999999987666552         345689999999999


Q ss_pred             eeeeccc
Q psy10867        334 AIHDYDF  340 (343)
Q Consensus       334 ~l~~~~~  340 (343)
                      .|+++.-
T Consensus       423 rlit~ea  429 (460)
T KOG0285|consen  423 RLITGEA  429 (460)
T ss_pred             eEEeccC
Confidence            9999864

>KOG0318|consensus

Probab=100.00  E-value=2.2e-39  Score=255.81  Aligned_cols=317  Identities=17%  Similarity=0.173  Sum_probs=251.0

Q ss_pred             EEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecc---cCCcceEEE
Q psy10867          8 AFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRL---ICPGRISSM   84 (343)
Q Consensus         8 ~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~---~~~~~v~~~   84 (343)
                      +.+++.|+.|.+|+-..-+...++..|.. -|.|+.|+|||.++++.+.||++.+||-.+++.+..+.   .|.+.|.++
T Consensus       163 i~T~sdDn~v~ffeGPPFKFk~s~r~Hsk-FV~~VRysPDG~~Fat~gsDgki~iyDGktge~vg~l~~~~aHkGsIfal  241 (603)
T KOG0318|consen  163 IATGSDDNTVAFFEGPPFKFKSSFREHSK-FVNCVRYSPDGSRFATAGSDGKIYIYDGKTGEKVGELEDSDAHKGSIFAL  241 (603)
T ss_pred             EEeccCCCeEEEeeCCCeeeeeccccccc-ceeeEEECCCCCeEEEecCCccEEEEcCCCccEEEEecCCCCccccEEEE
Confidence            45777799999999888888889999999 99999999999999988888999999999999887776   899999999


Q ss_pred             EECCCCCEEEE-ecCCeEEEEEccCCceEEE-------------------------------------------ecccCC
Q psy10867         85 QASPDAAYIAV-SIETKLHMWQISSGRLLAT-------------------------------------------ASSHYQ  120 (343)
Q Consensus        85 ~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~-------------------------------------------~~~~~~  120 (343)
                      +|+||++.+++ +.|.+++|||+.+++++++                                           +.+|..
T Consensus       242 sWsPDs~~~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWqkd~lItVSl~G~in~ln~~d~~~~~~i~GHnK  321 (603)
T KOG0318|consen  242 SWSPDSTQFLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQKDHLITVSLSGTINYLNPSDPSVLKVISGHNK  321 (603)
T ss_pred             EECCCCceEEEecCCceEEEEEeeccceEEEeecCCchhceEEEEEEeCCeEEEEEcCcEEEEecccCCChhheeccccc
Confidence            99999998886 7899999999886544333                                           258999


Q ss_pred             CeEEEEEecCCCEEEEecCCCeEEEeecCccceeeee-----------ecC--------------------CCCCCCCc-
Q psy10867        121 PITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTV-----------AFG--------------------IPGSSGKG-  168 (343)
Q Consensus       121 ~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~-----------~~~--------------------~~~~~~~~-  168 (343)
                      .|+++..+|++++|++|+.||.|.-|+..++...+..           ...                    ..+..... 
T Consensus       322 ~ITaLtv~~d~~~i~SgsyDG~I~~W~~~~g~~~~~~g~~h~nqI~~~~~~~~~~~~t~g~Dd~l~~~~~~~~~~t~~~~  401 (603)
T KOG0318|consen  322 SITALTVSPDGKTIYSGSYDGHINSWDSGSGTSDRLAGKGHTNQIKGMAASESGELFTIGWDDTLRVISLKDNGYTKSEV  401 (603)
T ss_pred             ceeEEEEcCCCCEEEeeccCceEEEEecCCccccccccccccceEEEEeecCCCcEEEEecCCeEEEEecccCcccccce
Confidence            9999999999999999999999999999776433211           000                    00000000 


Q ss_pred             ---------c----------ccccceeeeecc--------cccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCce--
Q psy10867        169 ---------V----------TGLTEPLHVKSQ--------HSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGED--  219 (343)
Q Consensus       169 ---------~----------~~~~~~~~~~~~--------~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~--  219 (343)
                               +          ......+..+..        -.-...+++++|++  ..++.|+.|+.+++|.+.....  
T Consensus       402 ~~lg~QP~~lav~~d~~~avv~~~~~iv~l~~~~~~~~~~~~y~~s~vAv~~~~--~~vaVGG~Dgkvhvysl~g~~l~e  479 (603)
T KOG0318|consen  402 VKLGSQPKGLAVLSDGGTAVVACISDIVLLQDQTKVSSIPIGYESSAVAVSPDG--SEVAVGGQDGKVHVYSLSGDELKE  479 (603)
T ss_pred             eecCCCceeEEEcCCCCEEEEEecCcEEEEecCCcceeeccccccceEEEcCCC--CEEEEecccceEEEEEecCCcccc
Confidence                     0          000011112221        12346789999999  8999999999999999976553  


Q ss_pred             -EEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEe
Q psy10867        220 -LLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSS  298 (343)
Q Consensus       220 -~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~  298 (343)
                       .....|.+++++++|+||+.+|+++...+.+.+||..+.+..          ...+.-|...|.+++|+|+..++|+|+
T Consensus       480 e~~~~~h~a~iT~vaySpd~~yla~~Da~rkvv~yd~~s~~~~----------~~~w~FHtakI~~~aWsP~n~~vATGS  549 (603)
T KOG0318|consen  480 EAKLLEHRAAITDVAYSPDGAYLAAGDASRKVVLYDVASREVK----------TNRWAFHTAKINCVAWSPNNKLVATGS  549 (603)
T ss_pred             eeeeecccCCceEEEECCCCcEEEEeccCCcEEEEEcccCcee----------cceeeeeeeeEEEEEeCCCceEEEecc
Confidence             344568999999999999999999999999999999875542          334556999999999999999999999


Q ss_pred             CCCcEEEEecccceeeeecc--cCCceEEEEEccCCCeeee
Q psy10867        299 ADETLKIWHTISRQCLRTIQ--HKGPVLGAFLGLLPPAIHD  337 (343)
Q Consensus       299 ~dg~i~iwd~~~~~~~~~~~--~~~~v~~~~~sp~~~~l~~  337 (343)
                      -|-.|.||+++.-...-.++  |...|+.+.|-.+...+-+
T Consensus       550 lDt~Viiysv~kP~~~i~iknAH~~gVn~v~wlde~tvvSs  590 (603)
T KOG0318|consen  550 LDTNVIIYSVKKPAKHIIIKNAHLGGVNSVAWLDESTVVSS  590 (603)
T ss_pred             ccceEEEEEccChhhheEeccccccCceeEEEecCceEEec
Confidence            99999999998654444444  8888999999866554443

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=100.00  E-value=2e-39  Score=261.45  Aligned_cols=278  Identities=25%  Similarity=0.363  Sum_probs=244.1

Q ss_pred             EEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-ecCCeEEEEEc
Q psy10867         28 LMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQI  106 (343)
Q Consensus        28 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~  106 (343)
                      ++++++|.. +|.+++|+|++.++++++.+|.+++|++.+++.......|...+..+.|+|+++++++ +.++.|++|++
T Consensus         2 ~~~~~~h~~-~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~   80 (289)
T cd00200           2 RRTLKGHTG-GVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDL   80 (289)
T ss_pred             chHhcccCC-CEEEEEEcCCCCEEEEeecCcEEEEEEeeCCCcEEEEecCCcceeEEEECCCCCEEEEEcCCCeEEEEEc
Confidence            356778988 9999999999999998888899999999988877777788899999999999987776 67999999999


Q ss_pred             cCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccce
Q psy10867        107 SSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPV  186 (343)
Q Consensus       107 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  186 (343)
                      .+++.+..+..|...+.++.|+|+++++++++.+|.+.+||+++.+                      ....+..|...+
T Consensus        81 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~----------------------~~~~~~~~~~~i  138 (289)
T cd00200          81 ETGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGK----------------------CLTTLRGHTDWV  138 (289)
T ss_pred             CcccceEEEeccCCcEEEEEEcCCCCEEEEecCCCeEEEEECCCcE----------------------EEEEeccCCCcE
Confidence            9888888888999999999999998899988889999999998653                      344455788899


Q ss_pred             EEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeeccccccccc
Q psy10867        187 THVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHH  265 (343)
Q Consensus       187 ~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~  265 (343)
                      .+++|+|++  .++++++.++.+++||+++++....+. +...+.++.|+|+++.+++++.++.|++||++....     
T Consensus       139 ~~~~~~~~~--~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~-----  211 (289)
T cd00200         139 NSVAFSPDG--TFVASSSQDGTIKLWDLRTGKCVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKC-----  211 (289)
T ss_pred             EEEEEcCcC--CEEEEEcCCCcEEEEEccccccceeEecCccccceEEECCCcCEEEEecCCCcEEEEECCCCce-----
Confidence            999999987  788888889999999999888877776 556899999999999999999999999999986433     


Q ss_pred             ccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc-cCCceEEEEEccCCCeeeecccC
Q psy10867        266 IQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVLGAFLGLLPPAIHDYDFT  341 (343)
Q Consensus       266 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~~  341 (343)
                            ...+..|...+.+++|+|++.++++++.||.|++||+.+++.+..+. |...+.+++|+|++++|++++..
T Consensus       212 ------~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d  282 (289)
T cd00200         212 ------LGTLRGHENGVNSVAFSPDGYLLASGSEDGTIRVWDLRTGECVQTLSGHTNSVTSLAWSPDGKRLASGSAD  282 (289)
T ss_pred             ------ecchhhcCCceEEEEEcCCCcEEEEEcCCCcEEEEEcCCceeEEEccccCCcEEEEEECCCCCEEEEecCC
Confidence                  34455788899999999998889988889999999999999888888 88899999999999999998754

>KOG0273|consensus

Probab=100.00  E-value=2.7e-40  Score=257.52  Aligned_cols=271  Identities=16%  Similarity=0.266  Sum_probs=241.4

Q ss_pred             ccceEEEecCC--------CCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceec
Q psy10867          3 LLNEVAFSYDG--------SGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLR   74 (343)
Q Consensus         3 ~v~~~~~s~~~--------dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~   74 (343)
                      .|+++.++.+|        ||.++||+. .|.++.++..|.+ +|.++.|+..|.++++++-|+++.+||..++...+.+
T Consensus       237 dVT~L~Wn~~G~~LatG~~~G~~riw~~-~G~l~~tl~~Hkg-PI~slKWnk~G~yilS~~vD~ttilwd~~~g~~~q~f  314 (524)
T KOG0273|consen  237 DVTSLDWNNDGTLLATGSEDGEARIWNK-DGNLISTLGQHKG-PIFSLKWNKKGTYILSGGVDGTTILWDAHTGTVKQQF  314 (524)
T ss_pred             CcceEEecCCCCeEEEeecCcEEEEEec-CchhhhhhhccCC-ceEEEEEcCCCCEEEeccCCccEEEEeccCceEEEee
Confidence            35556555444        899999996 7899999999999 9999999999999999999999999999999988888


Q ss_pred             ccCCcceEEEEECCCCCEEEEecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCcccee
Q psy10867         75 LICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICK  154 (343)
Q Consensus        75 ~~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~  154 (343)
                      .-|..+-..+.|-.+..+..++.|+.|+|+.+...+++.++.+|.++|.++.|.|.+.+|++++.|++++||......  
T Consensus       315 ~~~s~~~lDVdW~~~~~F~ts~td~~i~V~kv~~~~P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~--  392 (524)
T KOG0273|consen  315 EFHSAPALDVDWQSNDEFATSSTDGCIHVCKVGEDRPVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQSN--  392 (524)
T ss_pred             eeccCCccceEEecCceEeecCCCceEEEEEecCCCcceeeecccCceEEEEECCCCceEEEecCCCeeEeeecCCCc--
Confidence            888888788999877777777899999999999999999999999999999999999999999999999999976643  


Q ss_pred             eeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCC-------ceEEEEeeCCCeEEEEecCCCceEEEe-ecC
Q psy10867        155 QTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGA-------KSRVASVSHDRTCKIFDLCTGEDLLSL-ILD  226 (343)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-------~~~l~~~~~d~~i~~wd~~~~~~~~~~-~~~  226 (343)
                                          ....+..|...|..+.|+|.++       +..+++++.|+++++||+..+.++..+ +|.
T Consensus       393 --------------------~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~kH~  452 (524)
T KOG0273|consen  393 --------------------SVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTLMKHQ  452 (524)
T ss_pred             --------------------chhhhhhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCceeEeeccCC
Confidence                                5566778999999999999874       357999999999999999999999999 599


Q ss_pred             CcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEE
Q psy10867        227 TRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIW  306 (343)
Q Consensus       227 ~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw  306 (343)
                      .+|.+++|+|+|+++++|+.||.|.+|+.+..+..+           .+. ..+.|..++|+.+|.+|..+-.|+.+++-
T Consensus       453 ~pVysvafS~~g~ylAsGs~dg~V~iws~~~~~l~~-----------s~~-~~~~Ifel~Wn~~G~kl~~~~sd~~vcvl  520 (524)
T KOG0273|consen  453 EPVYSVAFSPNGRYLASGSLDGCVHIWSTKTGKLVK-----------SYQ-GTGGIFELCWNAAGDKLGACASDGSVCVL  520 (524)
T ss_pred             CceEEEEecCCCcEEEecCCCCeeEeccccchheeE-----------eec-CCCeEEEEEEcCCCCEEEEEecCCCceEE
Confidence            999999999999999999999999999998865432           333 35669999999999999999999999999


Q ss_pred             ecc
Q psy10867        307 HTI  309 (343)
Q Consensus       307 d~~  309 (343)
                      |++
T Consensus       521 dlr  523 (524)
T KOG0273|consen  521 DLR  523 (524)
T ss_pred             Eec
Confidence            875

>KOG0645|consensus

Probab=100.00  E-value=4e-39  Score=234.15  Aligned_cols=275  Identities=18%  Similarity=0.234  Sum_probs=229.5

Q ss_pred             eEEEEEecCCCCcceEEEEeCC-ceEEEEEcCCCeEEEEeCCCc---ccceec-ccCCcceEEEEECCCCCEEEE-ecCC
Q psy10867         26 TLLMSYKGASVLSPHSMCLLGN-DYVLGVEKGKPMIQAWPVNSQ---EKAQLR-LICPGRISSMQASPDAAYIAV-SIET   99 (343)
Q Consensus        26 ~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~i~iw~~~~~---~~~~~~-~~~~~~v~~~~~s~~~~~l~~-~~d~   99 (343)
                      ..++.+++|.+ .+..++|+|. |.++|+++.|..|++|+...+   .+...+ .+|+..|.+++|+|.|++||+ +.|.
T Consensus         5 ~~~~~~~gh~~-r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~aSFD~   83 (312)
T KOG0645|consen    5 ILEQKLSGHKD-RVWSVAWHPGKGVILASCGTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASASFDA   83 (312)
T ss_pred             eeEEeecCCCC-cEEEEEeccCCceEEEeecCCceEEEEecCCCCcEEEEEeccccchheeeeeeecCCCcEEEEeeccc
Confidence            45678899999 9999999998 899999999999999998852   333333 378999999999999999997 7899


Q ss_pred             eEEEEEccCC--ceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceee
Q psy10867        100 KLHMWQISSG--RLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLH  177 (343)
Q Consensus       100 ~i~v~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (343)
                      ++.||.-..+  +++..+++|.+.|.|++|+++|++||+++.|+.|-||.+.....                   .+...
T Consensus        84 t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~deddE-------------------fec~a  144 (312)
T KOG0645|consen   84 TVVIWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDDE-------------------FECIA  144 (312)
T ss_pred             eEEEeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCc-------------------EEEEe
Confidence            9999986654  67889999999999999999999999999999999999985432                   23778


Q ss_pred             eecccccceEEEEeecCCCceEEEEeeCCCeEEEEecC---CCceEEEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEE
Q psy10867        178 VKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLC---TGEDLLSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSF  253 (343)
Q Consensus       178 ~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~---~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~  253 (343)
                      .+..|...|..+.|+|..  .+|++++.|++|++|+-.   .-++..++. +...+.+++|+|.|..|++++.|++++||
T Consensus       145 VL~~HtqDVK~V~WHPt~--dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~G~rl~s~sdD~tv~Iw  222 (312)
T KOG0645|consen  145 VLQEHTQDVKHVIWHPTE--DLLFSCSYDNTIKVYRDEDDDDWECVQTLDGHENTVWSLAFDNIGSRLVSCSDDGTVSIW  222 (312)
T ss_pred             eeccccccccEEEEcCCc--ceeEEeccCCeEEEEeecCCCCeeEEEEecCccceEEEEEecCCCceEEEecCCcceEee
Confidence            889999999999999988  799999999999999866   234667776 66789999999999999999999999999


Q ss_pred             EeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccc------eeeeecc--cCCceEE
Q psy10867        254 CLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISR------QCLRTIQ--HKGPVLG  325 (343)
Q Consensus       254 d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~------~~~~~~~--~~~~v~~  325 (343)
                      .....               .-..|...++.+.|.  ...|++++.|+.|++|.-...      +.+....  |...|++
T Consensus       223 ~~~~~---------------~~~~~sr~~Y~v~W~--~~~IaS~ggD~~i~lf~~s~~~d~p~~~l~~~~~~aHe~dVNs  285 (312)
T KOG0645|consen  223 RLYTD---------------LSGMHSRALYDVPWD--NGVIASGGGDDAIRLFKESDSPDEPSWNLLAKKEGAHEVDVNS  285 (312)
T ss_pred             eeccC---------------cchhcccceEeeeec--ccceEeccCCCEEEEEEecCCCCCchHHHHHhhhcccccccce
Confidence            86631               112377889999998  458999999999999986542      2222223  8889999


Q ss_pred             EEEccC-CCeeeecc
Q psy10867        326 AFLGLL-PPAIHDYD  339 (343)
Q Consensus       326 ~~~sp~-~~~l~~~~  339 (343)
                      ++|.|. ...|++++
T Consensus       286 V~w~p~~~~~L~s~~  300 (312)
T KOG0645|consen  286 VQWNPKVSNRLASGG  300 (312)
T ss_pred             EEEcCCCCCceeecC
Confidence            999995 56666654

>KOG0285|consensus

Probab=100.00  E-value=1.1e-39  Score=246.08  Aligned_cols=278  Identities=17%  Similarity=0.239  Sum_probs=241.8

Q ss_pred             cccceEEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcce
Q psy10867          2 SLLNEVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRI   81 (343)
Q Consensus         2 ~~v~~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v   81 (343)
                      +|.+....+++.|++++|||+.+|++..++.+|.. .|..+++|+-..+++++..|+.|+.||++..+.++.+.+|-..|
T Consensus       160 dP~n~wf~tgs~DrtikIwDlatg~LkltltGhi~-~vr~vavS~rHpYlFs~gedk~VKCwDLe~nkvIR~YhGHlS~V  238 (460)
T KOG0285|consen  160 DPGNEWFATGSADRTIKIWDLATGQLKLTLTGHIE-TVRGVAVSKRHPYLFSAGEDKQVKCWDLEYNKVIRHYHGHLSGV  238 (460)
T ss_pred             CCCceeEEecCCCceeEEEEcccCeEEEeecchhh-eeeeeeecccCceEEEecCCCeeEEEechhhhhHHHhcccccee
Confidence            57778888999999999999999999999999999 99999999999999999999999999999999999999999999


Q ss_pred             EEEEECCCCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecC
Q psy10867         82 SSMQASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFG  160 (343)
Q Consensus        82 ~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~  160 (343)
                      .+++.+|.-..|++ +.|.++++||+++...+..+.+|..+|..+.+.|...++++|+.|++|++||++.++        
T Consensus       239 ~~L~lhPTldvl~t~grDst~RvWDiRtr~~V~~l~GH~~~V~~V~~~~~dpqvit~S~D~tvrlWDl~agk--------  310 (460)
T KOG0285|consen  239 YCLDLHPTLDVLVTGGRDSTIRVWDIRTRASVHVLSGHTNPVASVMCQPTDPQVITGSHDSTVRLWDLRAGK--------  310 (460)
T ss_pred             EEEeccccceeEEecCCcceEEEeeecccceEEEecCCCCcceeEEeecCCCceEEecCCceEEEeeeccCc--------
Confidence            99999998888887 789999999999999999999999999999999988899999999999999999875        


Q ss_pred             CCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCC
Q psy10867        161 IPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTED  239 (343)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~  239 (343)
                                    ....+..|...+.+++.+|..  ..+++++.| .|+-|++..+..+..+. +..-+.+++.+.|+ 
T Consensus       311 --------------t~~tlt~hkksvral~lhP~e--~~fASas~d-nik~w~~p~g~f~~nlsgh~~iintl~~nsD~-  372 (460)
T KOG0285|consen  311 --------------TMITLTHHKKSVRALCLHPKE--NLFASASPD-NIKQWKLPEGEFLQNLSGHNAIINTLSVNSDG-  372 (460)
T ss_pred             --------------eeEeeecccceeeEEecCCch--hhhhccCCc-cceeccCCccchhhccccccceeeeeeeccCc-
Confidence                          445566899999999999998  788888877 58999999999888766 56678888887654 


Q ss_pred             EEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecc
Q psy10867        240 NIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTI  309 (343)
Q Consensus       240 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~  309 (343)
                      ++++|+.+|.+.+||.+++...+....  ......+ ..+..|++.+|...|..|++|..|.+|++|.-.
T Consensus       373 v~~~G~dng~~~fwdwksg~nyQ~~~t--~vqpGSl-~sEagI~as~fDktg~rlit~eadKtIk~~keD  439 (460)
T KOG0285|consen  373 VLVSGGDNGSIMFWDWKSGHNYQRGQT--IVQPGSL-ESEAGIFASCFDKTGSRLITGEADKTIKMYKED  439 (460)
T ss_pred             eEEEcCCceEEEEEecCcCcccccccc--cccCCcc-ccccceeEEeecccCceEEeccCCcceEEEecc
Confidence            788999999999999998765443210  0001111 134578999999999999999999999999743

>KOG0319|consensus

Probab=100.00  E-value=6.8e-40  Score=268.30  Aligned_cols=305  Identities=18%  Similarity=0.233  Sum_probs=262.3

Q ss_pred             EecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEe-CCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEEC
Q psy10867          9 FSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLL-GNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQAS   87 (343)
Q Consensus         9 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s   87 (343)
                      +.-..|..+.++|.++.+..+.+-|..+ .|..|+|- |+..+++.+++.+.+++|++.+..+. .+.+|.+.|.++...
T Consensus       297 l~vtaeQnl~l~d~~~l~i~k~ivG~nd-EI~Dm~~lG~e~~~laVATNs~~lr~y~~~~~~c~-ii~GH~e~vlSL~~~  374 (775)
T KOG0319|consen  297 LLVTAEQNLFLYDEDELTIVKQIVGYND-EILDMKFLGPEESHLAVATNSPELRLYTLPTSYCQ-IIPGHTEAVLSLDVW  374 (775)
T ss_pred             EEEEccceEEEEEccccEEehhhcCCch-hheeeeecCCccceEEEEeCCCceEEEecCCCceE-EEeCchhheeeeeec
Confidence            3344467899999999999999999998 99999997 56788888888899999998887766 677999999999966


Q ss_pred             CCCCEEEE-ecCCeEEEEEccCCc----eEEEecccCCCeEEEEEecCC-CEEEEecCCCeEEEeecCccceeeeeecCC
Q psy10867         88 PDAAYIAV-SIETKLHMWQISSGR----LLATASSHYQPITIVKWSADS-NFIVTGGEDGTICVWQLSRLICKQTVAFGI  161 (343)
Q Consensus        88 ~~~~~l~~-~~d~~i~v~~~~~~~----~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~  161 (343)
                      .+|-+|++ +.|+++++|.++++.    ++....+|.+.|.+++++..+ .+|+++|.|+++++|++...+.....    
T Consensus       375 ~~g~llat~sKD~svilWr~~~~~~~~~~~a~~~gH~~svgava~~~~~asffvsvS~D~tlK~W~l~~s~~~~~~----  450 (775)
T KOG0319|consen  375 SSGDLLATGSKDKSVILWRLNNNCSKSLCVAQANGHTNSVGAVAGSKLGASFFVSVSQDCTLKLWDLPKSKETAFP----  450 (775)
T ss_pred             ccCcEEEEecCCceEEEEEecCCcchhhhhhhhcccccccceeeecccCccEEEEecCCceEEEecCCCccccccc----
Confidence            67888887 689999999885543    345567899999999997643 58999999999999999872211110    


Q ss_pred             CCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCCE
Q psy10867        162 PGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDN  240 (343)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~  240 (343)
                               ...........|...|++++++|+.  .++++||.|.+.++|+++..+....+. |...+.++.|+|..+.
T Consensus       451 ---------~~~~~~~t~~aHdKdIN~Vaia~nd--kLiAT~SqDktaKiW~le~~~l~~vLsGH~RGvw~V~Fs~~dq~  519 (775)
T KOG0319|consen  451 ---------IVLTCRYTERAHDKDINCVAIAPND--KLIATGSQDKTAKIWDLEQLRLLGVLSGHTRGVWCVSFSKNDQL  519 (775)
T ss_pred             ---------ceehhhHHHHhhcccccceEecCCC--ceEEecccccceeeecccCceEEEEeeCCccceEEEEeccccce
Confidence                     0001223456799999999999998  899999999999999999888888887 7889999999999999


Q ss_pred             EEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc-c
Q psy10867        241 IYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-H  319 (343)
Q Consensus       241 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~  319 (343)
                      +++++.|++|+||.+.++..           +.++.||...|..+.|-.+++.|++++.||.|++|++++++++.++. |
T Consensus       520 laT~SgD~TvKIW~is~fSC-----------lkT~eGH~~aVlra~F~~~~~qliS~~adGliKlWnikt~eC~~tlD~H  588 (775)
T KOG0319|consen  520 LATCSGDKTVKIWSISTFSC-----------LKTFEGHTSAVLRASFIRNGKQLISAGADGLIKLWNIKTNECEMTLDAH  588 (775)
T ss_pred             eEeccCCceEEEEEecccee-----------eeeecCccceeEeeeeeeCCcEEEeccCCCcEEEEeccchhhhhhhhhc
Confidence            99999999999999998655           67899999999999999999999999999999999999999999999 9


Q ss_pred             CCceEEEEEccCCCeeeecccC
Q psy10867        320 KGPVLGAFLGLLPPAIHDYDFT  341 (343)
Q Consensus       320 ~~~v~~~~~sp~~~~l~~~~~~  341 (343)
                      .+.|++++.+|....+++++-.
T Consensus       589 ~DrvWaL~~~~~~~~~~tgg~D  610 (775)
T KOG0319|consen  589 NDRVWALSVSPLLDMFVTGGGD  610 (775)
T ss_pred             cceeEEEeecCccceeEecCCC
Confidence            9999999999999999887643

>KOG0281|consensus

Probab=100.00  E-value=9.8e-42  Score=256.48  Aligned_cols=269  Identities=21%  Similarity=0.321  Sum_probs=231.1

Q ss_pred             EEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEE
Q psy10867          7 VAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQA   86 (343)
Q Consensus         7 ~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~   86 (343)
                      .++|+..|++|+|||..+.++++.+.+|.+ .|.|+.|.  .+++++|+.|.+|++||+++++++.++.+|.+.|..+.|
T Consensus       209 kiVSGlrDnTikiWD~n~~~c~~~L~GHtG-SVLCLqyd--~rviisGSSDsTvrvWDv~tge~l~tlihHceaVLhlrf  285 (499)
T KOG0281|consen  209 KIVSGLRDNTIKIWDKNSLECLKILTGHTG-SVLCLQYD--ERVIVSGSSDSTVRVWDVNTGEPLNTLIHHCEAVLHLRF  285 (499)
T ss_pred             hhhcccccCceEEeccccHHHHHhhhcCCC-cEEeeecc--ceEEEecCCCceEEEEeccCCchhhHHhhhcceeEEEEE
Confidence            356788899999999999999999999999 99999984  569999999999999999999999999999999999999


Q ss_pred             CCCCCEEEEecCCeEEEEEccCCc---eEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCC
Q psy10867         87 SPDAAYIAVSIETKLHMWQISSGR---LLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPG  163 (343)
Q Consensus        87 s~~~~~l~~~~d~~i~v~~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~  163 (343)
                      + +|-.+.++.|.++.+||+.+..   +...+.+|...|..+.|+  .+++++++.|.+|++|++.+..           
T Consensus       286 ~-ng~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd--~kyIVsASgDRTikvW~~st~e-----------  351 (499)
T KOG0281|consen  286 S-NGYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWSTSTCE-----------  351 (499)
T ss_pred             e-CCEEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeeccc--cceEEEecCCceEEEEecccee-----------
Confidence            8 4545555899999999998764   334567999999999995  5799999999999999999975           


Q ss_pred             CCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCCEEE
Q psy10867        164 SSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIY  242 (343)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~  242 (343)
                                 .++.+.+|...|.|+.+..    +++++|+.|.+|++||+..|.+++.++ |+.-|.++.|+  .+.++
T Consensus       352 -----------fvRtl~gHkRGIAClQYr~----rlvVSGSSDntIRlwdi~~G~cLRvLeGHEeLvRciRFd--~krIV  414 (499)
T KOG0281|consen  352 -----------FVRTLNGHKRGIACLQYRD----RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIV  414 (499)
T ss_pred             -----------eehhhhcccccceehhccC----eEEEecCCCceEEEEeccccHHHHHHhchHHhhhheeec--Cceee
Confidence                       5566679999999988743    799999999999999999999999888 67789999997  67999


Q ss_pred             EEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEeccccee
Q psy10867        243 MGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQC  313 (343)
Q Consensus       243 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~  313 (343)
                      +|+.||+|++||+.....++..  ...-++..+..|.+.|..+.|  |...+++++.|.+|.|||+.++-.
T Consensus       415 SGaYDGkikvWdl~aaldpra~--~~~~Cl~~lv~hsgRVFrLQF--D~fqIvsssHddtILiWdFl~~~~  481 (499)
T KOG0281|consen  415 SGAYDGKIKVWDLQAALDPRAP--ASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDTILIWDFLNGPP  481 (499)
T ss_pred             eccccceEEEEecccccCCccc--ccchHHHhhhhccceeEEEee--cceEEEeccCCCeEEEEEcCCCCc
Confidence            9999999999999876554321  222346677789999999998  456899999999999999987644

>KOG0276|consensus

Probab=100.00  E-value=9.8e-40  Score=262.94  Aligned_cols=276  Identities=16%  Similarity=0.178  Sum_probs=250.8

Q ss_pred             EEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-ecCCeEEEEEcc
Q psy10867         29 MSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQIS  107 (343)
Q Consensus        29 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~  107 (343)
                      +++..+.. .|.++.++|...++.++--+|.+.|||.++...++.+.....+|.+..|-+..+++++ +.|..|+||+.+
T Consensus         7 rk~~~rSd-RVKsVd~HPtePw~la~LynG~V~IWnyetqtmVksfeV~~~PvRa~kfiaRknWiv~GsDD~~IrVfnyn   85 (794)
T KOG0276|consen    7 RKFQSRSD-RVKSVDFHPTEPWILAALYNGDVQIWNYETQTMVKSFEVSEVPVRAAKFIARKNWIVTGSDDMQIRVFNYN   85 (794)
T ss_pred             hHhhccCC-ceeeeecCCCCceEEEeeecCeeEEEecccceeeeeeeecccchhhheeeeccceEEEecCCceEEEEecc
Confidence            34555777 9999999999988888877799999999999999888888899999999998888887 567899999999


Q ss_pred             CCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceE
Q psy10867        108 SGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVT  187 (343)
Q Consensus       108 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  187 (343)
                      +++.+..+..|.+.|++++.+|...++++++.|-.|++||.+..                     +...+.+.+|...|.
T Consensus        86 t~ekV~~FeAH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~---------------------wa~~qtfeGH~HyVM  144 (794)
T KOG0276|consen   86 TGEKVKTFEAHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENE---------------------WACEQTFEGHEHYVM  144 (794)
T ss_pred             cceeeEEeeccccceeeeeecCCCCeEEecCCccEEEEeeccCc---------------------eeeeeEEcCcceEEE
Confidence            99999999999999999999999999999999999999999875                     347788899999999


Q ss_pred             EEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCC--CEEEEEcCCCcEEEEEeecccccccc
Q psy10867        188 HVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTE--DNIYMGTSEGVIKSFCLRQVPRTRDH  264 (343)
Q Consensus       188 ~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~--~~l~~~~~d~~i~i~d~~~~~~~~~~  264 (343)
                      +++|+|..+ +.+++++-|++|++|.+.+..+..++. |...|+++.|-+-|  .+|++|+.|..|++||.++..     
T Consensus       145 qv~fnPkD~-ntFaS~sLDrTVKVWslgs~~~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~-----  218 (794)
T KOG0276|consen  145 QVAFNPKDP-NTFASASLDRTVKVWSLGSPHPNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKS-----  218 (794)
T ss_pred             EEEecCCCc-cceeeeeccccEEEEEcCCCCCceeeeccccCcceEEeccCCCcceEEecCCCceEEEeecchHH-----
Confidence            999999877 899999999999999999999988888 88899999998855  699999999999999999854     


Q ss_pred             cccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc-cCCceEEEEEccCCCeeeec
Q psy10867        265 HIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVLGAFLGLLPPAIHDY  338 (343)
Q Consensus       265 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~  338 (343)
                            |+.++.||...|..+.|+|.-.++++|++||++|||+..+.++..++. ..+.+++++-.+.+..++.|
T Consensus       219 ------CV~TLeGHt~Nvs~v~fhp~lpiiisgsEDGTvriWhs~Ty~lE~tLn~gleRvW~I~~~k~~~~i~vG  287 (794)
T KOG0276|consen  219 ------CVQTLEGHTNNVSFVFFHPELPIIISGSEDGTVRIWNSKTYKLEKTLNYGLERVWCIAAHKGDGKIAVG  287 (794)
T ss_pred             ------HHHHhhcccccceEEEecCCCcEEEEecCCccEEEecCcceehhhhhhcCCceEEEEeecCCCCeEEEe
Confidence                  477899999999999999999999999999999999999998888888 77889999988887776655

>KOG0645|consensus

Probab=100.00  E-value=3.2e-38  Score=229.47  Aligned_cols=273  Identities=21%  Similarity=0.257  Sum_probs=225.2

Q ss_pred             eEEEecCCCCeEEEEecCC---ceEEEEE-ecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCc--ccceecccCCc
Q psy10867          6 EVAFSYDGSGAISVWEPKG---GTLLMSY-KGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQ--EKAQLRLICPG   79 (343)
Q Consensus         6 ~~~~s~~~dg~i~iwd~~~---~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~--~~~~~~~~~~~   79 (343)
                      .++.|+++|..|++|+...   -.+...+ .+|+. .|++++|+|.|++|++++-|.++.||.-..+  +++..+.+|..
T Consensus        28 ~ilAscg~Dk~vriw~~~~~~s~~ck~vld~~hkr-sVRsvAwsp~g~~La~aSFD~t~~Iw~k~~~efecv~~lEGHEn  106 (312)
T KOG0645|consen   28 VILASCGTDKAVRIWSTSSGDSWTCKTVLDDGHKR-SVRSVAWSPHGRYLASASFDATVVIWKKEDGEFECVATLEGHEN  106 (312)
T ss_pred             eEEEeecCCceEEEEecCCCCcEEEEEeccccchh-eeeeeeecCCCcEEEEeeccceEEEeecCCCceeEEeeeecccc
Confidence            3688888999999999874   3445444 35777 9999999999999999999999999987654  45677889999


Q ss_pred             ceEEEEECCCCCEEEE-ecCCeEEEEEccCC---ceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceee
Q psy10867         80 RISSMQASPDAAYIAV-SIETKLHMWQISSG---RLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQ  155 (343)
Q Consensus        80 ~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~  155 (343)
                      .|.+++|+++|.+||+ +.|..|.||.+..+   ++...++.|...|..+.|+|...+|++++.|.+|++|+-...    
T Consensus       107 EVK~Vaws~sG~~LATCSRDKSVWiWe~deddEfec~aVL~~HtqDVK~V~WHPt~dlL~S~SYDnTIk~~~~~~d----  182 (312)
T KOG0645|consen  107 EVKCVAWSASGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWHPTEDLLFSCSYDNTIKVYRDEDD----  182 (312)
T ss_pred             ceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcEEEEeeeccccccccEEEEcCCcceeEEeccCCeEEEEeecCC----
Confidence            9999999999999998 68999999999755   567788999999999999999999999999999999987632    


Q ss_pred             eeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCCcEEEEEEc
Q psy10867        156 TVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFD  235 (343)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~  235 (343)
                                     ..+...+.+.+|...|.+++|++.|  ..|++++.|++++||-..+.   ....+..++..+.|.
T Consensus       183 ---------------ddW~c~~tl~g~~~TVW~~~F~~~G--~rl~s~sdD~tv~Iw~~~~~---~~~~~sr~~Y~v~W~  242 (312)
T KOG0645|consen  183 ---------------DDWECVQTLDGHENTVWSLAFDNIG--SRLVSCSDDGTVSIWRLYTD---LSGMHSRALYDVPWD  242 (312)
T ss_pred             ---------------CCeeEEEEecCccceEEEEEecCCC--ceEEEecCCcceEeeeeccC---cchhcccceEeeeec
Confidence                           1234778889999999999999999  89999999999999986522   222366788999998


Q ss_pred             CCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccC-CCEEEEEeCCCcEEEEecc
Q psy10867        236 GTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSIT-GITLLSSSADETLKIWHTI  309 (343)
Q Consensus       236 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~s~~~dg~i~iwd~~  309 (343)
                        ...|++++.|+.|++|.-........+..    ....-..|...|+++.|.|. .++|++|+.||.|++|.+.
T Consensus       243 --~~~IaS~ggD~~i~lf~~s~~~d~p~~~l----~~~~~~aHe~dVNsV~w~p~~~~~L~s~~DDG~v~~W~l~  311 (312)
T KOG0645|consen  243 --NGVIASGGGDDAIRLFKESDSPDEPSWNL----LAKKEGAHEVDVNSVQWNPKVSNRLASGGDDGIVNFWELE  311 (312)
T ss_pred             --ccceEeccCCCEEEEEEecCCCCCchHHH----HHhhhcccccccceEEEcCCCCCceeecCCCceEEEEEec
Confidence              66899999999999997764322111110    02234568899999999995 6799999999999999874

>KOG0263|consensus

Probab=100.00  E-value=2e-39  Score=267.76  Aligned_cols=207  Identities=19%  Similarity=0.296  Sum_probs=194.6

Q ss_pred             EEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-ecCCeEEEEEcc
Q psy10867         29 MSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQIS  107 (343)
Q Consensus        29 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~  107 (343)
                      +++-+|.+ +|....|+|+.++|.+++.|+++|+|.+.+..++-...+|..+|..+.|+|-|-++|+ +.|++-++|...
T Consensus       445 ~~L~GH~G-PVyg~sFsPd~rfLlScSED~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~GyYFatas~D~tArLWs~d  523 (707)
T KOG0263|consen  445 RTLYGHSG-PVYGCSFSPDRRFLLSCSEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAPRGYYFATASHDQTARLWSTD  523 (707)
T ss_pred             EEeecCCC-ceeeeeecccccceeeccCCcceeeeecccceeEEEecCCCcceeeEEecCCceEEEecCCCceeeeeecc
Confidence            45788999 9999999999999999999999999999999999888899999999999999999998 789999999999


Q ss_pred             CCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceE
Q psy10867        108 SGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVT  187 (343)
Q Consensus       108 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  187 (343)
                      ...+++.+.+|.+.|.|+.|+|+..++++||.|.+|++||+.++.                      .++.+.+|.++|.
T Consensus       524 ~~~PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~----------------------~VRiF~GH~~~V~  581 (707)
T KOG0263|consen  524 HNKPLRIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGN----------------------SVRIFTGHKGPVT  581 (707)
T ss_pred             cCCchhhhcccccccceEEECCcccccccCCCCceEEEEEcCCCc----------------------EEEEecCCCCceE
Confidence            999999999999999999999999999999999999999999975                      5667789999999


Q ss_pred             EEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccc
Q psy10867        188 HVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPR  260 (343)
Q Consensus       188 ~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~  260 (343)
                      +++|+|.|  .+|++|+.||.|.+||+.+++.+..+. |.+.|.++.|+.+|..|++|+.|.+|++||+.....
T Consensus       582 al~~Sp~G--r~LaSg~ed~~I~iWDl~~~~~v~~l~~Ht~ti~SlsFS~dg~vLasgg~DnsV~lWD~~~~~~  653 (707)
T KOG0263|consen  582 ALAFSPCG--RYLASGDEDGLIKIWDLANGSLVKQLKGHTGTIYSLSFSRDGNVLASGGADNSVRLWDLTKVIE  653 (707)
T ss_pred             EEEEcCCC--ceEeecccCCcEEEEEcCCCcchhhhhcccCceeEEEEecCCCEEEecCCCCeEEEEEchhhcc
Confidence            99999999  899999999999999999999888776 788899999999999999999999999999976443

>KOG0266|consensus

Probab=100.00  E-value=9.1e-39  Score=269.25  Aligned_cols=272  Identities=24%  Similarity=0.355  Sum_probs=235.0

Q ss_pred             cceEEEecCC--------CCeEEEEecCCce--EEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeC-CCcccce
Q psy10867          4 LNEVAFSYDG--------SGAISVWEPKGGT--LLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPV-NSQEKAQ   72 (343)
Q Consensus         4 v~~~~~s~~~--------dg~i~iwd~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~-~~~~~~~   72 (343)
                      |.++.|++++        ++.+++|+..+++  .++.+.+|.. .|.+++|+|++.++++++.|++|+|||+ ..+..++
T Consensus       162 v~~~~fs~~g~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~h~~-~v~~~~fs~d~~~l~s~s~D~tiriwd~~~~~~~~~  240 (456)
T KOG0266|consen  162 VTCVDFSPDGRALAAASSDGLIRIWKLEGIKSNLLRELSGHTR-GVSDVAFSPDGSYLLSGSDDKTLRIWDLKDDGRNLK  240 (456)
T ss_pred             eEEEEEcCCCCeEEEccCCCcEEEeecccccchhhcccccccc-ceeeeEECCCCcEEEEecCCceEEEeeccCCCeEEE
Confidence            4445555555        7999999998877  7888889998 9999999999999999999999999999 5557788


Q ss_pred             ecccCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCcc
Q psy10867         73 LRLICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRL  151 (343)
Q Consensus        73 ~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~  151 (343)
                      .+.+|...|++++|+|+++++++ +.|++|++||+++++++..+.+|.+.|++++|++++++|++++.|+.|++||+.++
T Consensus       241 ~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs~~is~~~f~~d~~~l~s~s~d~~i~vwd~~~~  320 (456)
T KOG0266|consen  241 TLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGECVRKLKGHSDGISGLAFSPDGNLLVSASYDGTIRVWDLETG  320 (456)
T ss_pred             EecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccCCeEEEeeeccCCceEEEEECCCCCEEEEcCCCccEEEEECCCC
Confidence            89999999999999999988887 68999999999999999999999999999999999999999999999999999997


Q ss_pred             ceeeeeecCCCCCCCCccccccceeeeeccccc--ceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCC-
Q psy10867        152 ICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSL--PVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDT-  227 (343)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~-  227 (343)
                      ...                    ....+..+..  ++++++|+|++  .++++++.|+.+++||++.++....+. +.. 
T Consensus       321 ~~~--------------------~~~~~~~~~~~~~~~~~~fsp~~--~~ll~~~~d~~~~~w~l~~~~~~~~~~~~~~~  378 (456)
T KOG0266|consen  321 SKL--------------------CLKLLSGAENSAPVTSVQFSPNG--KYLLSASLDRTLKLWDLRSGKSVGTYTGHSNL  378 (456)
T ss_pred             cee--------------------eeecccCCCCCCceeEEEECCCC--cEEEEecCCCeEEEEEccCCcceeeecccCCc
Confidence            521                    1122233333  59999999999  899999999999999999998888776 333 


Q ss_pred             --cEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccc-cCcEEEEEEccCCCEEEEEe--CCCc
Q psy10867        228 --RLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGH-EKQVTSLSCSITGITLLSSS--ADET  302 (343)
Q Consensus       228 --~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~s~~--~dg~  302 (343)
                        .+.+...++.+.++++|+.|+.|++||+.+...           +..+.+| ...+..+.++|..+++++++  .|+.
T Consensus       379 ~~~~~~~~~~~~~~~i~sg~~d~~v~~~~~~s~~~-----------~~~l~~h~~~~~~~~~~~~~~~~~~s~s~~~d~~  447 (456)
T KOG0266|consen  379 VRCIFSPTLSTGGKLIYSGSEDGSVYVWDSSSGGI-----------LQRLEGHSKAAVSDLSSHPTENLIASSSFEGDGL  447 (456)
T ss_pred             ceeEecccccCCCCeEEEEeCCceEEEEeCCccch-----------hhhhcCCCCCceeccccCCCcCeeeecCcCCCce
Confidence              345556688999999999999999999997443           5567888 88999999999999999988  7899


Q ss_pred             EEEEecc
Q psy10867        303 LKIWHTI  309 (343)
Q Consensus       303 i~iwd~~  309 (343)
                      +++|...
T Consensus       448 ~~~w~~~  454 (456)
T KOG0266|consen  448 IRLWKYD  454 (456)
T ss_pred             EEEecCC
Confidence            9999753

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=100.00  E-value=6.2e-38  Score=252.75  Aligned_cols=265  Identities=28%  Similarity=0.433  Sum_probs=232.3

Q ss_pred             EEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEE
Q psy10867          7 VAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQA   86 (343)
Q Consensus         7 ~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~   86 (343)
                      .+++++.+|.|++|++.+++....+..|.. .+..+.|+|++.++++++.+|.+++|++.+++....+..|...+.++.|
T Consensus        23 ~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~l~~~~~~~~i~i~~~~~~~~~~~~~~~~~~i~~~~~  101 (289)
T cd00200          23 LLATGSGDGTIKVWDLETGELLRTLKGHTG-PVRDVAASADGTYLASGSSDKTIRLWDLETGECVRTLTGHTSYVSSVAF  101 (289)
T ss_pred             EEEEeecCcEEEEEEeeCCCcEEEEecCCc-ceeEEEECCCCCEEEEEcCCCeEEEEEcCcccceEEEeccCCcEEEEEE
Confidence            344444589999999999988888999988 8899999999988888887899999999988777777788889999999


Q ss_pred             CCCCCEEEEec-CCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCC
Q psy10867         87 SPDAAYIAVSI-ETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSS  165 (343)
Q Consensus        87 s~~~~~l~~~~-d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~  165 (343)
                      +|++++++++. ++.+.+||+.+++....+..|...+.+++|+|++.++++++.|+.|++||++..+             
T Consensus       102 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~-------------  168 (289)
T cd00200         102 SPDGRILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGK-------------  168 (289)
T ss_pred             cCCCCEEEEecCCCeEEEEECCCcEEEEEeccCCCcEEEEEEcCcCCEEEEEcCCCcEEEEEccccc-------------
Confidence            99999988865 9999999999898888888999999999999999999988889999999998653             


Q ss_pred             CCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEe-ecCCcEEEEEEcCCCCEEEEE
Q psy10867        166 GKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSL-ILDTRLTCVAFDGTEDNIYMG  244 (343)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~  244 (343)
                               ....+..|...+.++.|+|++  ..+++++.++.+++||+++++.+..+ .+...+.+++|+|++.+++++
T Consensus       169 ---------~~~~~~~~~~~i~~~~~~~~~--~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  237 (289)
T cd00200         169 ---------CVATLTGHTGEVNSVAFSPDG--EKLLSSSSDGTIKLWDLSTGKCLGTLRGHENGVNSVAFSPDGYLLASG  237 (289)
T ss_pred             ---------cceeEecCccccceEEECCCc--CEEEEecCCCcEEEEECCCCceecchhhcCCceEEEEEcCCCcEEEEE
Confidence                     344455788899999999998  78888888999999999998888888 577799999999998888888


Q ss_pred             cCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEe
Q psy10867        245 TSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWH  307 (343)
Q Consensus       245 ~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd  307 (343)
                      +.++.|++||+.....           ...+..|...+.+++|+|++++|++++.||.|++|+
T Consensus       238 ~~~~~i~i~~~~~~~~-----------~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iw~  289 (289)
T cd00200         238 SEDGTIRVWDLRTGEC-----------VQTLSGHTNSVTSLAWSPDGKRLASGSADGTIRIWD  289 (289)
T ss_pred             cCCCcEEEEEcCCcee-----------EEEccccCCcEEEEEECCCCCEEEEecCCCeEEecC
Confidence            8899999999986433           334557888999999999999999999999999996

>KOG0292|consensus

Probab=100.00  E-value=7.9e-39  Score=267.28  Aligned_cols=293  Identities=15%  Similarity=0.211  Sum_probs=241.8

Q ss_pred             cccceEEEecCC--------CCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCccccee
Q psy10867          2 SLLNEVAFSYDG--------SGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQL   73 (343)
Q Consensus         2 ~~v~~~~~s~~~--------dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~   73 (343)
                      +++..+.|.|..        +|.|++||.+-+.++..|..|++ +|+.++|+|++.++++|++|-.|++|+..+.+++..
T Consensus        10 sRvKglsFHP~rPwILtslHsG~IQlWDYRM~tli~rFdeHdG-pVRgv~FH~~qplFVSGGDDykIkVWnYk~rrclft   88 (1202)
T KOG0292|consen   10 SRVKGLSFHPKRPWILTSLHSGVIQLWDYRMGTLIDRFDEHDG-PVRGVDFHPTQPLFVSGGDDYKIKVWNYKTRRCLFT   88 (1202)
T ss_pred             ccccceecCCCCCEEEEeecCceeeeehhhhhhHHhhhhccCC-ccceeeecCCCCeEEecCCccEEEEEecccceehhh
Confidence            356677777776        79999999999999999999999 999999999999999999999999999999999999


Q ss_pred             cccCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccc
Q psy10867         74 RLICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLI  152 (343)
Q Consensus        74 ~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~  152 (343)
                      +.+|.+.|..+.|++.-.++.+ +.|.+|+||+..+++++..+.+|...|.|..|+|....++++|-|.+|++||+...+
T Consensus        89 L~GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwqsr~~iavltGHnHYVMcAqFhptEDlIVSaSLDQTVRVWDisGLR  168 (1202)
T KOG0292|consen   89 LLGHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQSRKCIAVLTGHNHYVMCAQFHPTEDLIVSASLDQTVRVWDISGLR  168 (1202)
T ss_pred             hccccceeEEeeccCCCceEEEccCCCeEEEEeccCCceEEEEecCceEEEeeccCCccceEEEecccceEEEEeecchh
Confidence            9999999999999999999997 778999999999999999999999999999999999999999999999999997654


Q ss_pred             eeeeeecCC----CCCCC-Ccccc--ccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceE--EEe
Q psy10867        153 CKQTVAFGI----PGSSG-KGVTG--LTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDL--LSL  223 (343)
Q Consensus       153 ~~~~~~~~~----~~~~~-~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~--~~~  223 (343)
                      ....-+.+.    .+... ...-+  -.-..+.+.+|...|+.++|+|.-  .++++|+.|+.|++|.+...+.-  -+.
T Consensus       169 kk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTl--pliVSG~DDRqVKlWrmnetKaWEvDtc  246 (1202)
T KOG0292|consen  169 KKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTL--PLIVSGADDRQVKLWRMNETKAWEVDTC  246 (1202)
T ss_pred             ccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCc--ceEEecCCcceeeEEEeccccceeehhh
Confidence            332221110    00000 11111  112456789999999999999998  79999999999999998654431  122


Q ss_pred             -ecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCc
Q psy10867        224 -ILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADET  302 (343)
Q Consensus       224 -~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~  302 (343)
                       .|.+.|.++.|+|..+++++.+.|+.|++||+.....           +..++...+..+.++-+|..+++|+|-. +-
T Consensus       247 rgH~nnVssvlfhp~q~lIlSnsEDksirVwDm~kRt~-----------v~tfrrendRFW~laahP~lNLfAAgHD-sG  314 (1202)
T KOG0292|consen  247 RGHYNNVSSVLFHPHQDLILSNSEDKSIRVWDMTKRTS-----------VQTFRRENDRFWILAAHPELNLFAAGHD-SG  314 (1202)
T ss_pred             hcccCCcceEEecCccceeEecCCCccEEEEecccccc-----------eeeeeccCCeEEEEEecCCcceeeeecC-Cc
Confidence             2788999999999999999999999999999987433           5667667788889999999887776654 44


Q ss_pred             EEEEecc
Q psy10867        303 LKIWHTI  309 (343)
Q Consensus       303 i~iwd~~  309 (343)
                      +.+|.++
T Consensus       315 m~VFkle  321 (1202)
T KOG0292|consen  315 MIVFKLE  321 (1202)
T ss_pred             eEEEEEc
Confidence            4455443

>KOG0292|consensus

Probab=100.00  E-value=3.8e-39  Score=269.18  Aligned_cols=275  Identities=16%  Similarity=0.204  Sum_probs=245.6

Q ss_pred             EecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCC
Q psy10867         31 YKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQISSG  109 (343)
Q Consensus        31 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~  109 (343)
                      |+.... .|..++|+|...++.++-.+|.|++||..-+.++..+..|.++|..+.|+|+..++++ |.|-.|++|+..+.
T Consensus         5 fEskSs-RvKglsFHP~rPwILtslHsG~IQlWDYRM~tli~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk~r   83 (1202)
T KOG0292|consen    5 FESKSS-RVKGLSFHPKRPWILTSLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKTR   83 (1202)
T ss_pred             hhcccc-cccceecCCCCCEEEEeecCceeeeehhhhhhHHhhhhccCCccceeeecCCCCeEEecCCccEEEEEecccc
Confidence            444555 8999999999999999988899999999999999889999999999999999999998 67889999999999


Q ss_pred             ceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEE
Q psy10867        110 RLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHV  189 (343)
Q Consensus       110 ~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  189 (343)
                      +++.++.+|.+.|..+.|++.-.+|+++|.|.+|+||+..+.+                      .+..+.+|...|.|.
T Consensus        84 rclftL~GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwqsr~----------------------~iavltGHnHYVMcA  141 (1202)
T KOG0292|consen   84 RCLFTLLGHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQSRK----------------------CIAVLTGHNHYVMCA  141 (1202)
T ss_pred             eehhhhccccceeEEeeccCCCceEEEccCCCeEEEEeccCCc----------------------eEEEEecCceEEEee
Confidence            9999999999999999999999999999999999999999875                      566778999999999


Q ss_pred             EeecCCCceEEEEeeCCCeEEEEecCCCc---------------------------eE--EEee-cCCcEEEEEEcCCCC
Q psy10867        190 TLSKLGAKSRVASVSHDRTCKIFDLCTGE---------------------------DL--LSLI-LDTRLTCVAFDGTED  239 (343)
Q Consensus       190 ~~~~~~~~~~l~~~~~d~~i~~wd~~~~~---------------------------~~--~~~~-~~~~i~~~~~~~~~~  239 (343)
                      .|+|..  .+++++|-|.+||+||+..-+                           .+  ..+. |+..|+-++|+|.-.
T Consensus       142 qFhptE--DlIVSaSLDQTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlp  219 (1202)
T KOG0292|consen  142 QFHPTE--DLIVSASLDQTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLP  219 (1202)
T ss_pred             ccCCcc--ceEEEecccceEEEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcc
Confidence            999988  799999999999999985211                           11  1112 677899999999999


Q ss_pred             EEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc-
Q psy10867        240 NIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-  318 (343)
Q Consensus       240 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-  318 (343)
                      .+++|+.|..|++|.+...+.-         .+.+.++|.+.|.++-|+|...++++.|+|++|++||+...+.+++|+ 
T Consensus       220 liVSG~DDRqVKlWrmnetKaW---------EvDtcrgH~nnVssvlfhp~q~lIlSnsEDksirVwDm~kRt~v~tfrr  290 (1202)
T KOG0292|consen  220 LIVSGADDRQVKLWRMNETKAW---------EVDTCRGHYNNVSSVLFHPHQDLILSNSEDKSIRVWDMTKRTSVQTFRR  290 (1202)
T ss_pred             eEEecCCcceeeEEEeccccce---------eehhhhcccCCcceEEecCccceeEecCCCccEEEEecccccceeeeec
Confidence            9999999999999998764321         156789999999999999999999999999999999999999999998 


Q ss_pred             cCCceEEEEEccCCCeeeecc
Q psy10867        319 HKGPVLGAFLGLLPPAIHDYD  339 (343)
Q Consensus       319 ~~~~v~~~~~sp~~~~l~~~~  339 (343)
                      ..+..+.++-+|..+.++++.
T Consensus       291 endRFW~laahP~lNLfAAgH  311 (1202)
T KOG0292|consen  291 ENDRFWILAAHPELNLFAAGH  311 (1202)
T ss_pred             cCCeEEEEEecCCcceeeeec
Confidence            788899999999999998864

>KOG0282|consensus

Probab=100.00  E-value=8e-40  Score=255.64  Aligned_cols=281  Identities=16%  Similarity=0.251  Sum_probs=243.2

Q ss_pred             eEEEEEecCCCCcceEEEEeC-CceEEEEEcCCCeEEEEeCCC-cccceecccCCcceEEEEECCCCCEEEE-ecCCeEE
Q psy10867         26 TLLMSYKGASVLSPHSMCLLG-NDYVLGVEKGKPMIQAWPVNS-QEKAQLRLICPGRISSMQASPDAAYIAV-SIETKLH  102 (343)
Q Consensus        26 ~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~i~iw~~~~-~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~  102 (343)
                      +.+.++.+|.. .|.++.|.| .+.++.+++.|+.|+||++-. +++++++.+|..+|..++|+++|..+.+ +.|+.|+
T Consensus       205 k~~~~~~gH~k-gvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~lK  283 (503)
T KOG0282|consen  205 KLSHNLSGHTK-GVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCGTSFLSASFDRFLK  283 (503)
T ss_pred             hheeeccCCcc-ccchhhhccceeeEEEecCCCceEEEEEEecCcceehhhhcchhhhhhhhccccCCeeeeeecceeee
Confidence            45678999999 999999999 789999999999999999876 7888999999999999999999976665 8999999


Q ss_pred             EEEccCCceEEEecccCCCeEEEEEecCC-CEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecc
Q psy10867        103 MWQISSGRLLATASSHYQPITIVKWSADS-NFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQ  181 (343)
Q Consensus       103 v~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (343)
                      +||.++|+++..+.. ...++|+.|+|++ +.+++|+.|+.|+.||+++++                      .++.+..
T Consensus       284 lwDtETG~~~~~f~~-~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~k----------------------vvqeYd~  340 (503)
T KOG0282|consen  284 LWDTETGQVLSRFHL-DKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGK----------------------VVQEYDR  340 (503)
T ss_pred             eeccccceEEEEEec-CCCceeeecCCCCCcEEEEecCCCcEEEEeccchH----------------------HHHHHHh
Confidence            999999999998863 4568999999988 899999999999999999985                      4455567


Q ss_pred             cccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeec--CCcEEEEEEcCCCCEEEEEcCCCcEEEEEeeccc
Q psy10867        182 HSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLIL--DTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVP  259 (343)
Q Consensus       182 ~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~--~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~  259 (343)
                      |-+.|..+.|-+++  .++++.+.|+.+++|+.+.+-.+.....  .....++..+|+++++++-+.|+.|.+|.+....
T Consensus       341 hLg~i~~i~F~~~g--~rFissSDdks~riWe~~~~v~ik~i~~~~~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~  418 (503)
T KOG0282|consen  341 HLGAILDITFVDEG--RRFISSSDDKSVRIWENRIPVPIKNIADPEMHTMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPF  418 (503)
T ss_pred             hhhheeeeEEccCC--ceEeeeccCccEEEEEcCCCccchhhcchhhccCcceecCCCCCeehhhccCceEEEEeccccc
Confidence            99999999999999  8999999999999999988877665543  3457789999999999999999999999976544


Q ss_pred             ccccccccCCCCCCcccccc--CcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc-cCCceEEEEEccCCCe-e
Q psy10867        260 RTRDHHIQDSTSNPDFIGHE--KQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVLGAFLGLLPPA-I  335 (343)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~--~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~-l  335 (343)
                      +...        ...+.+|.  +.-..+.|||||++|++|+.||.+.+||.++-+.+..++ |..++..+.|+|...- +
T Consensus       419 r~nk--------kK~feGh~vaGys~~v~fSpDG~~l~SGdsdG~v~~wdwkt~kl~~~lkah~~~ci~v~wHP~e~Skv  490 (503)
T KOG0282|consen  419 RLNK--------KKRFEGHSVAGYSCQVDFSPDGRTLCSGDSDGKVNFWDWKTTKLVSKLKAHDQPCIGVDWHPVEPSKV  490 (503)
T ss_pred             ccCH--------hhhhcceeccCceeeEEEcCCCCeEEeecCCccEEEeechhhhhhhccccCCcceEEEEecCCCccee
Confidence            3322        34567775  345678899999999999999999999999999999999 9999999999997654 5


Q ss_pred             eeccc
Q psy10867        336 HDYDF  340 (343)
Q Consensus       336 ~~~~~  340 (343)
                      +++++
T Consensus       491 at~~w  495 (503)
T KOG0282|consen  491 ATCGW  495 (503)
T ss_pred             Eeccc
Confidence            66654

>KOG0646|consensus

Probab=100.00  E-value=2.5e-38  Score=246.32  Aligned_cols=311  Identities=32%  Similarity=0.575  Sum_probs=259.2

Q ss_pred             CCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEE
Q psy10867         14 SGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYI   93 (343)
Q Consensus        14 dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l   93 (343)
                      ...+.+||+++|..+.++++.....-.++..-....++++-.....+.+|.+...........-+++|.+++-+|+|.+|
T Consensus        17 ~~~~~~~dl~TGt~~~~ykg~~~a~~~sl~~l~~~yllsaq~~rp~l~vw~i~k~~~~~q~~v~Pg~v~al~s~n~G~~l   96 (476)
T KOG0646|consen   17 PINCIVWDLRTGTSLLQYKGSYLAQAASLTALNNEYLLSAQLKRPLLHVWEILKKDQVVQYIVLPGPVHALASSNLGYFL   96 (476)
T ss_pred             CcceeEEecCCCceeEEecCcccccchhhhhhchhheeeecccCccccccccCchhhhhhhcccccceeeeecCCCceEE
Confidence            35699999999999999998732133333333334556665555799999998766655444668899999999999999


Q ss_pred             EEe-cCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccc
Q psy10867         94 AVS-IETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGL  172 (343)
Q Consensus        94 ~~~-~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~  172 (343)
                      ++| ..+.|++|.+.+|.++..+.+|-..|+|+.|+.|+.+|++|+.||.|.+|++...-..             .....
T Consensus        97 ~ag~i~g~lYlWelssG~LL~v~~aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~~lv~a-------------~~~~~  163 (476)
T KOG0646|consen   97 LAGTISGNLYLWELSSGILLNVLSAHYQSITCLKFSDDGSHIITGSKDGAVLVWLLTDLVSA-------------DNDHS  163 (476)
T ss_pred             EeecccCcEEEEEeccccHHHHHHhhccceeEEEEeCCCcEEEecCCCccEEEEEEEeeccc-------------ccCCC
Confidence            987 8899999999999999999999999999999999999999999999999998653111             01113


Q ss_pred             cceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEE
Q psy10867        173 TEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKS  252 (343)
Q Consensus       173 ~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i  252 (343)
                      .++++.+..|.-+|+.+...+.+...+++++|.|.++++||+..+..+.++..+..+.+++.+|-++.+++|+.+|.|.+
T Consensus       164 ~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~LLlti~fp~si~av~lDpae~~~yiGt~~G~I~~  243 (476)
T KOG0646|consen  164 VKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLGVLLLTITFPSSIKAVALDPAERVVYIGTEEGKIFQ  243 (476)
T ss_pred             ccceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEeccceeeEEEecCCcceeEEEcccccEEEecCCcceEEe
Confidence            46899999999999999999886668999999999999999999999999999999999999999999999999999999


Q ss_pred             EEeecccccc-----cccccCCCCCCccccccC--cEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc-cCCceE
Q psy10867        253 FCLRQVPRTR-----DHHIQDSTSNPDFIGHEK--QVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVL  324 (343)
Q Consensus       253 ~d~~~~~~~~-----~~~~~~~~~~~~~~~~~~--~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~  324 (343)
                      .++.......     ......+.....+.+|.+  .|+|++++-||.+|++|+.||.|.|||+.+.++++++. ..++|+
T Consensus       244 ~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLais~DgtlLlSGd~dg~VcvWdi~S~Q~iRtl~~~kgpVt  323 (476)
T KOG0646|consen  244 NLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESAITCLAISTDGTLLLSGDEDGKVCVWDIYSKQCIRTLQTSKGPVT  323 (476)
T ss_pred             eehhcCCcccccccccccccccceeeeeccccCCcceeEEEEecCccEEEeeCCCCCEEEEecchHHHHHHHhhhccccc
Confidence            9887654111     111233455677889998  99999999999999999999999999999999999999 899999


Q ss_pred             EEEEccCCCeeee
Q psy10867        325 GAFLGLLPPAIHD  337 (343)
Q Consensus       325 ~~~~sp~~~~l~~  337 (343)
                      .+.+.|-.+..+.
T Consensus       324 nL~i~~~~~~~~l  336 (476)
T KOG0646|consen  324 NLQINPLERGIIL  336 (476)
T ss_pred             eeEeeccccceec
Confidence            9999776555444

>KOG0276|consensus

Probab=100.00  E-value=2.1e-38  Score=255.27  Aligned_cols=268  Identities=17%  Similarity=0.231  Sum_probs=237.7

Q ss_pred             ccceEEEecCC--------CCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceec
Q psy10867          3 LLNEVAFSYDG--------SGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLR   74 (343)
Q Consensus         3 ~v~~~~~s~~~--------dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~   74 (343)
                      +|.++.+.|..        +|.|.|||.++...++.++-.+. +|++..|-+...++++|++|..|++|+.++++.++.+
T Consensus        15 RVKsVd~HPtePw~la~LynG~V~IWnyetqtmVksfeV~~~-PvRa~kfiaRknWiv~GsDD~~IrVfnynt~ekV~~F   93 (794)
T KOG0276|consen   15 RVKSVDFHPTEPWILAALYNGDVQIWNYETQTMVKSFEVSEV-PVRAAKFIARKNWIVTGSDDMQIRVFNYNTGEKVKTF   93 (794)
T ss_pred             ceeeeecCCCCceEEEeeecCeeEEEecccceeeeeeeeccc-chhhheeeeccceEEEecCCceEEEEecccceeeEEe
Confidence            45566666665        79999999999999999999888 9999999999999999999999999999999999999


Q ss_pred             ccCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCC-ceEEEecccCCCeEEEEEec-CCCEEEEecCCCeEEEeecCcc
Q psy10867         75 LICPGRISSMQASPDAAYIAV-SIETKLHMWQISSG-RLLATASSHYQPITIVKWSA-DSNFIVTGGEDGTICVWQLSRL  151 (343)
Q Consensus        75 ~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~-~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~  151 (343)
                      ..|.+-|.+++.+|...++.+ +.|-+|++||.+.+ .+.+++++|...|.+++|+| |.+.+++++-|++|++|.+.+.
T Consensus        94 eAH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrTVKVWslgs~  173 (794)
T KOG0276|consen   94 EAHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENEWACEQTFEGHEHYVMQVAFNPKDPNTFASASLDRTVKVWSLGSP  173 (794)
T ss_pred             eccccceeeeeecCCCCeEEecCCccEEEEeeccCceeeeeEEcCcceEEEEEEecCCCccceeeeeccccEEEEEcCCC
Confidence            999999999999999998887 56779999999866 67889999999999999999 7789999999999999999886


Q ss_pred             ceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEE
Q psy10867        152 ICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLT  230 (343)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~  230 (343)
                      .                      +..++.+|...|+++.+.+.++..+|++|+.|.++++||.++..+++++. |...|.
T Consensus       174 ~----------------------~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~TLeGHt~Nvs  231 (794)
T KOG0276|consen  174 H----------------------PNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQTLEGHTNNVS  231 (794)
T ss_pred             C----------------------CceeeeccccCcceEEeccCCCcceEEecCCCceEEEeecchHHHHHHhhcccccce
Confidence            4                      55667799999999999998877899999999999999999999999998 888999


Q ss_pred             EEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEE
Q psy10867        231 CVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLK  304 (343)
Q Consensus       231 ~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~  304 (343)
                      .++|+|.-..+++|+.||+++||...+.....           .+.-.-..+++++-.+.++.++.|...|.|.
T Consensus       232 ~v~fhp~lpiiisgsEDGTvriWhs~Ty~lE~-----------tLn~gleRvW~I~~~k~~~~i~vG~Deg~i~  294 (794)
T KOG0276|consen  232 FVFFHPELPIIISGSEDGTVRIWNSKTYKLEK-----------TLNYGLERVWCIAAHKGDGKIAVGFDEGSVT  294 (794)
T ss_pred             EEEecCCCcEEEEecCCccEEEecCcceehhh-----------hhhcCCceEEEEeecCCCCeEEEeccCCcEE
Confidence            99999999999999999999999988765432           2333456788888888777788887776653

>PLN00181 protein SPA1-RELATED; Provisional

Probab=100.00  E-value=4.5e-37  Score=277.55  Aligned_cols=296  Identities=13%  Similarity=0.188  Sum_probs=234.4

Q ss_pred             CCeEEEEecCCceEEEEE-----ecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcc----cc---eecccCCcce
Q psy10867         14 SGAISVWEPKGGTLLMSY-----KGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQE----KA---QLRLICPGRI   81 (343)
Q Consensus        14 dg~i~iwd~~~~~~~~~~-----~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~----~~---~~~~~~~~~v   81 (343)
                      +|..++|+..+.+....+     ..|.. .|.+++|+|++.++++++.|+.|+||+.....    ..   .....+...+
T Consensus       457 ~gl~~~~~~~~~~~~~~~~~~~~~~~~~-~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~~~~~v  535 (793)
T PLN00181        457 EGLCKYLSFSKLRVKADLKQGDLLNSSN-LVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELASRSKL  535 (793)
T ss_pred             hhhhhhhcccceEEEEeeccccccCCCC-cEEEEEECCCCCEEEEEeCCCEEEEEECCcccccccccccceEEecccCce
Confidence            566888888766554443     34777 99999999999999999999999999976421    10   1111345678


Q ss_pred             EEEEECCC-CCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEec-CCCEEEEecCCCeEEEeecCccceeeeee
Q psy10867         82 SSMQASPD-AAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSA-DSNFIVTGGEDGTICVWQLSRLICKQTVA  158 (343)
Q Consensus        82 ~~~~~s~~-~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~  158 (343)
                      .+++|+|. +.+|++ +.|+.|++||+.+++.+..+.+|.+.|++++|+| ++.+|++|+.||.|++||++++....   
T Consensus       536 ~~l~~~~~~~~~las~~~Dg~v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~---  612 (793)
T PLN00181        536 SGICWNSYIKSQVASSNFEGVVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIG---  612 (793)
T ss_pred             eeEEeccCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEE---
Confidence            99999874 677776 6899999999999999999999999999999997 78899999999999999998765433   


Q ss_pred             cCCCCCCCCccccccceeeeecccccceEEEEeec-CCCceEEEEeeCCCeEEEEecCCCc-eEEEee-cCCcEEEEEEc
Q psy10867        159 FGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSK-LGAKSRVASVSHDRTCKIFDLCTGE-DLLSLI-LDTRLTCVAFD  235 (343)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~l~~~~~d~~i~~wd~~~~~-~~~~~~-~~~~i~~~~~~  235 (343)
                                         .+. +...+.++.|.+ ++  .++++|+.|+.|++||+++.+ .+..+. |...|.++.|.
T Consensus       613 -------------------~~~-~~~~v~~v~~~~~~g--~~latgs~dg~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~  670 (793)
T PLN00181        613 -------------------TIK-TKANICCVQFPSESG--RSLAFGSADHKVYYYDLRNPKLPLCTMIGHSKTVSYVRFV  670 (793)
T ss_pred             -------------------EEe-cCCCeEEEEEeCCCC--CEEEEEeCCCeEEEEECCCCCccceEecCCCCCEEEEEEe
Confidence                               223 335788999965 46  799999999999999998765 344443 77889999997


Q ss_pred             CCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeee
Q psy10867        236 GTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLR  315 (343)
Q Consensus       236 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~  315 (343)
                       ++.+|++++.|+.|++||++.....     ....++..+.+|...+..++|+|++++|++|+.|+.|++|+......+.
T Consensus       671 -~~~~lvs~s~D~~ikiWd~~~~~~~-----~~~~~l~~~~gh~~~i~~v~~s~~~~~lasgs~D~~v~iw~~~~~~~~~  744 (793)
T PLN00181        671 -DSSTLVSSSTDNTLKLWDLSMSISG-----INETPLHSFMGHTNVKNFVGLSVSDGYIATGSETNEVFVYHKAFPMPVL  744 (793)
T ss_pred             -CCCEEEEEECCCEEEEEeCCCCccc-----cCCcceEEEcCCCCCeeEEEEcCCCCEEEEEeCCCEEEEEECCCCCceE
Confidence             6889999999999999998753211     0123356788999999999999999999999999999999976554332


Q ss_pred             ec-------------c-cCCceEEEEEccCCCeeeecccC
Q psy10867        316 TI-------------Q-HKGPVLGAFLGLLPPAIHDYDFT  341 (343)
Q Consensus       316 ~~-------------~-~~~~v~~~~~sp~~~~l~~~~~~  341 (343)
                      .+             . +...|.+++|+|++..|++++..
T Consensus       745 s~~~~~~~~~~~~~~~~~~~~V~~v~ws~~~~~lva~~~d  784 (793)
T PLN00181        745 SYKFKTIDPVSGLEVDDASQFISSVCWRGQSSTLVAANST  784 (793)
T ss_pred             EEecccCCcccccccCCCCcEEEEEEEcCCCCeEEEecCC
Confidence            21             1 34569999999999999998754

>KOG0310|consensus

Probab=100.00  E-value=8.5e-38  Score=244.64  Aligned_cols=266  Identities=18%  Similarity=0.201  Sum_probs=233.4

Q ss_pred             cceEEEEeCCc--eEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEEe-cCCeEEEEEccCCceEEE
Q psy10867         38 SPHSMCLLGND--YVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVS-IETKLHMWQISSGRLLAT  114 (343)
Q Consensus        38 ~v~~~~~~~~~--~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~d~~i~v~~~~~~~~~~~  114 (343)
                      .|.+++|+|..  .++++++.  .+.||+..+....+.+......+.++.|-.||++||+| ..|.|++||..+...+..
T Consensus        28 ~vssl~fsp~~P~d~aVt~S~--rvqly~~~~~~~~k~~srFk~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k~r~iLR~  105 (487)
T KOG0310|consen   28 SVSSLCFSPKHPYDFAVTSSV--RVQLYSSVTRSVRKTFSRFKDVVYSVDFRSDGRLLAAGDESGHVKVFDMKSRVILRQ  105 (487)
T ss_pred             cceeEecCCCCCCceEEeccc--EEEEEecchhhhhhhHHhhccceeEEEeecCCeEEEccCCcCcEEEeccccHHHHHH
Confidence            89999999964  44444444  79999999988888777888999999999999999986 579999999877777888


Q ss_pred             ecccCCCeEEEEEec-CCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeec
Q psy10867        115 ASSHYQPITIVKWSA-DSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSK  193 (343)
Q Consensus       115 ~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  193 (343)
                      +.+|+.++..+.|+| ++..+++|+.|+.+++||+.+..                      ....+.+|+..|.+.+++|
T Consensus       106 ~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~----------------------v~~~l~~htDYVR~g~~~~  163 (487)
T KOG0310|consen  106 LYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAY----------------------VQAELSGHTDYVRCGDISP  163 (487)
T ss_pred             HhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcE----------------------EEEEecCCcceeEeecccc
Confidence            999999999999999 45578889999999999999863                      2335679999999999999


Q ss_pred             CCCceEEEEeeCCCeEEEEecCCC-ceEEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCC
Q psy10867        194 LGAKSRVASVSHDRTCKIFDLCTG-EDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSN  272 (343)
Q Consensus       194 ~~~~~~l~~~~~d~~i~~wd~~~~-~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~  272 (343)
                      ..+ .++++|+.||.|++||++.. ..+.++.|+.+|..+.+-|.|..+++++ ...|++||+..+...          +
T Consensus       164 ~~~-hivvtGsYDg~vrl~DtR~~~~~v~elnhg~pVe~vl~lpsgs~iasAg-Gn~vkVWDl~~G~ql----------l  231 (487)
T KOG0310|consen  164 AND-HIVVTGSYDGKVRLWDTRSLTSRVVELNHGCPVESVLALPSGSLIASAG-GNSVKVWDLTTGGQL----------L  231 (487)
T ss_pred             CCC-eEEEecCCCceEEEEEeccCCceeEEecCCCceeeEEEcCCCCEEEEcC-CCeEEEEEecCCcee----------h
Confidence            865 79999999999999999987 7788899999999999999999999886 567999999865443          4


Q ss_pred             CccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecccCCceEEEEEccCCCeeeecc
Q psy10867        273 PDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQHKGPVLGAFLGLLPPAIHDYD  339 (343)
Q Consensus       273 ~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~  339 (343)
                      ..+..|...|+|+++..++..|++++-|+.|++||+.+.+.+..+...++|.+++.+|+++.++.|-
T Consensus       232 ~~~~~H~KtVTcL~l~s~~~rLlS~sLD~~VKVfd~t~~Kvv~s~~~~~pvLsiavs~dd~t~viGm  298 (487)
T KOG0310|consen  232 TSMFNHNKTVTCLRLASDSTRLLSGSLDRHVKVFDTTNYKVVHSWKYPGPVLSIAVSPDDQTVVIGM  298 (487)
T ss_pred             hhhhcccceEEEEEeecCCceEeecccccceEEEEccceEEEEeeecccceeeEEecCCCceEEEec
Confidence            4455699999999999999999999999999999999999999999999999999999999998763

>KOG0643|consensus

Probab=100.00  E-value=1.5e-37  Score=225.61  Aligned_cols=281  Identities=18%  Similarity=0.201  Sum_probs=235.5

Q ss_pred             ceEEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEE
Q psy10867          5 NEVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSM   84 (343)
Q Consensus         5 ~~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~   84 (343)
                      ..++||+..|....||-..+|+.+.++.+|.+ +|.|+..+.+.+.+.+|+.|.+++|||+++++++..+ ....+|..+
T Consensus        22 GDLlFscaKD~~~~vw~s~nGerlGty~GHtG-avW~~Did~~s~~liTGSAD~t~kLWDv~tGk~la~~-k~~~~Vk~~   99 (327)
T KOG0643|consen   22 GDLLFSCAKDSTPTVWYSLNGERLGTYDGHTG-AVWCCDIDWDSKHLITGSADQTAKLWDVETGKQLATW-KTNSPVKRV   99 (327)
T ss_pred             CcEEEEecCCCCceEEEecCCceeeeecCCCc-eEEEEEecCCcceeeeccccceeEEEEcCCCcEEEEe-ecCCeeEEE
Confidence            46789999999999999989999999999999 9999999999999999999999999999999988766 456789999


Q ss_pred             EECCCCCEEEEec------CCeEEEEEcc-------CCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCcc
Q psy10867         85 QASPDAAYIAVSI------ETKLHMWQIS-------SGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRL  151 (343)
Q Consensus        85 ~~s~~~~~l~~~~------d~~i~v~~~~-------~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~  151 (343)
                      .|+++|++++.+.      .+.|.++|++       ..++...+..+.+.++.+-|.|-++.|++|.+||.|.+||++++
T Consensus       100 ~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l~~~ii~Ghe~G~is~~da~~g  179 (327)
T KOG0643|consen  100 DFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPLGETIIAGHEDGSISIYDARTG  179 (327)
T ss_pred             eeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeeecccCCEEEEecCCCcEEEEEcccC
Confidence            9999999888643      3579999998       44567778888899999999999999999999999999999987


Q ss_pred             ceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCCcEEE
Q psy10867        152 ICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTC  231 (343)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~~  231 (343)
                      ..                     .+.....|...|+.++++++.  .++++++.|.+-++||.++.+.++++....++++
T Consensus       180 ~~---------------------~v~s~~~h~~~Ind~q~s~d~--T~FiT~s~Dttakl~D~~tl~v~Kty~te~PvN~  236 (327)
T KOG0643|consen  180 KE---------------------LVDSDEEHSSKINDLQFSRDR--TYFITGSKDTTAKLVDVRTLEVLKTYTTERPVNT  236 (327)
T ss_pred             ce---------------------eeechhhhccccccccccCCc--ceEEecccCccceeeeccceeeEEEeeecccccc
Confidence            43                     445556799999999999999  8999999999999999999999999999999999


Q ss_pred             EEEcCCCCEEEEEcCCCcEEEEEe--ecc-cccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEec
Q psy10867        232 VAFDGTEDNIYMGTSEGVIKSFCL--RQV-PRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHT  308 (343)
Q Consensus       232 ~~~~~~~~~l~~~~~d~~i~i~d~--~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~  308 (343)
                      .+++|....++.|+...-.-+=-.  +.+ -..+.++....+.+...++|-++|++++|+|+|+..++|++||.|++...
T Consensus       237 aaisP~~d~VilgGGqeA~dVTTT~~r~GKFEArFyh~i~eEEigrvkGHFGPINsvAfhPdGksYsSGGEDG~VR~h~F  316 (327)
T KOG0643|consen  237 AAISPLLDHVILGGGQEAMDVTTTSTRAGKFEARFYHLIFEEEIGRVKGHFGPINSVAFHPDGKSYSSGGEDGYVRLHHF  316 (327)
T ss_pred             eecccccceEEecCCceeeeeeeecccccchhhhHHHHHHHHHhccccccccCcceeEECCCCcccccCCCCceEEEEEe
Confidence            999998888887754332222111  111 01111111222346678899999999999999999999999999999865


Q ss_pred             cc
Q psy10867        309 IS  310 (343)
Q Consensus       309 ~~  310 (343)
                      ..
T Consensus       317 d~  318 (327)
T KOG0643|consen  317 DS  318 (327)
T ss_pred             cc
Confidence            43

>KOG0282|consensus

Probab=100.00  E-value=9.1e-39  Score=249.77  Aligned_cols=267  Identities=14%  Similarity=0.235  Sum_probs=225.9

Q ss_pred             ceEEEecCCCCeEEEEecCC-ceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEE
Q psy10867          5 NEVAFSYDGSGAISVWEPKG-GTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISS   83 (343)
Q Consensus         5 ~~~~~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~   83 (343)
                      ..+++|++-|+.|+||++.. ++++++|.+|.. +|.+++|+++|.-+.+++-|+.+++||+++|+++..+ .....++|
T Consensus       227 ~hLlLS~gmD~~vklW~vy~~~~~lrtf~gH~k-~Vrd~~~s~~g~~fLS~sfD~~lKlwDtETG~~~~~f-~~~~~~~c  304 (503)
T KOG0282|consen  227 GHLLLSGGMDGLVKLWNVYDDRRCLRTFKGHRK-PVRDASFNNCGTSFLSASFDRFLKLWDTETGQVLSRF-HLDKVPTC  304 (503)
T ss_pred             eeEEEecCCCceEEEEEEecCcceehhhhcchh-hhhhhhccccCCeeeeeecceeeeeeccccceEEEEE-ecCCCcee
Confidence            46888999999999999876 999999999999 9999999999977777777799999999999988665 34567899


Q ss_pred             EEECCCC-C-EEEEecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCC
Q psy10867         84 MQASPDA-A-YIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGI  161 (343)
Q Consensus        84 ~~~s~~~-~-~l~~~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~  161 (343)
                      +.|.||+ + +|+++.|+.|+.||+++++.++.+..|-+.|..+.|-++++++++.++|+.++||+.+.+.....+    
T Consensus       305 vkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~hLg~i~~i~F~~~g~rFissSDdks~riWe~~~~v~ik~i----  380 (503)
T KOG0282|consen  305 VKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYDRHLGAILDITFVDEGRRFISSSDDKSVRIWENRIPVPIKNI----  380 (503)
T ss_pred             eecCCCCCcEEEEecCCCcEEEEeccchHHHHHHHhhhhheeeeEEccCCceEeeeccCccEEEEEcCCCccchhh----
Confidence            9999988 4 444578999999999999999999999999999999999999999999999999999886543321    


Q ss_pred             CCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceE---EEee---cCCcEEEEEEc
Q psy10867        162 PGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDL---LSLI---LDTRLTCVAFD  235 (343)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~---~~~~---~~~~i~~~~~~  235 (343)
                                       ...+.....++..+|++  .+++.-+.|+.|.++.+...-.+   ..+.   ..+.-..+.||
T Consensus       381 -----------------~~~~~hsmP~~~~~P~~--~~~~aQs~dN~i~ifs~~~~~r~nkkK~feGh~vaGys~~v~fS  441 (503)
T KOG0282|consen  381 -----------------ADPEMHTMPCLTLHPNG--KWFAAQSMDNYIAIFSTVPPFRLNKKKRFEGHSVAGYSCQVDFS  441 (503)
T ss_pred             -----------------cchhhccCcceecCCCC--CeehhhccCceEEEEecccccccCHhhhhcceeccCceeeEEEc
Confidence                             12233456689999999  89999999999999986533221   1122   34567889999


Q ss_pred             CCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCC-CEEEEEeCCCcEEEEe
Q psy10867        236 GTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITG-ITLLSSSADETLKIWH  307 (343)
Q Consensus       236 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~s~~~dg~i~iwd  307 (343)
                      |||.+|++|..||.+.+||.++...           +..+++|++++..+.|+|.. ..+|+|+.||.|++||
T Consensus       442 pDG~~l~SGdsdG~v~~wdwkt~kl-----------~~~lkah~~~ci~v~wHP~e~Skvat~~w~G~Ikiwd  503 (503)
T KOG0282|consen  442 PDGRTLCSGDSDGKVNFWDWKTTKL-----------VSKLKAHDQPCIGVDWHPVEPSKVATCGWDGLIKIWD  503 (503)
T ss_pred             CCCCeEEeecCCccEEEeechhhhh-----------hhccccCCcceEEEEecCCCcceeEecccCceeEecC
Confidence            9999999999999999999998554           56788999999999999965 5899999999999996

>KOG0281|consensus

Probab=100.00  E-value=3.7e-39  Score=242.64  Aligned_cols=248  Identities=22%  Similarity=0.353  Sum_probs=215.7

Q ss_pred             cceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCCceEEEec
Q psy10867         38 SPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATAS  116 (343)
Q Consensus        38 ~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~  116 (343)
                      .|.|+.+  |...+++|..|++|+|||.++.++.+.+.+|.+.|.|+.|.  .+.+++ ++|.+|++||+++|+++.++-
T Consensus       199 gVYClQY--DD~kiVSGlrDnTikiWD~n~~~c~~~L~GHtGSVLCLqyd--~rviisGSSDsTvrvWDv~tge~l~tli  274 (499)
T KOG0281|consen  199 GVYCLQY--DDEKIVSGLRDNTIKIWDKNSLECLKILTGHTGSVLCLQYD--ERVIVSGSSDSTVRVWDVNTGEPLNTLI  274 (499)
T ss_pred             ceEEEEe--cchhhhcccccCceEEeccccHHHHHhhhcCCCcEEeeecc--ceEEEecCCCceEEEEeccCCchhhHHh
Confidence            7888887  45677888888999999999999999999999999999985  557776 689999999999999999999


Q ss_pred             ccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCC
Q psy10867        117 SHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGA  196 (343)
Q Consensus       117 ~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  196 (343)
                      +|...|..+.|+  ..++++++.|.++.+||+.....+                   ...+.+.+|...|+.+.|+.   
T Consensus       275 hHceaVLhlrf~--ng~mvtcSkDrsiaVWdm~sps~i-------------------t~rrVLvGHrAaVNvVdfd~---  330 (499)
T KOG0281|consen  275 HHCEAVLHLRFS--NGYMVTCSKDRSIAVWDMASPTDI-------------------TLRRVLVGHRAAVNVVDFDD---  330 (499)
T ss_pred             hhcceeEEEEEe--CCEEEEecCCceeEEEeccCchHH-------------------HHHHHHhhhhhheeeecccc---
Confidence            999999999996  568999999999999999886422                   25677889999999999976   


Q ss_pred             ceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCcc
Q psy10867        197 KSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDF  275 (343)
Q Consensus       197 ~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~  275 (343)
                       +++++++.|.+|++|++.+++.++++. |...|.|+.+.  ++++++|+.|.+|++||+..+..           +..+
T Consensus       331 -kyIVsASgDRTikvW~~st~efvRtl~gHkRGIAClQYr--~rlvVSGSSDntIRlwdi~~G~c-----------LRvL  396 (499)
T KOG0281|consen  331 -KYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGAC-----------LRVL  396 (499)
T ss_pred             -ceEEEecCCceEEEEeccceeeehhhhcccccceehhcc--CeEEEecCCCceEEEEeccccHH-----------HHHH
Confidence             689999999999999999999999987 77889888875  88999999999999999988544           6678


Q ss_pred             ccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccce---------eeeecc-cCCceEEEEEc
Q psy10867        276 IGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQ---------CLRTIQ-HKGPVLGAFLG  329 (343)
Q Consensus       276 ~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~---------~~~~~~-~~~~v~~~~~s  329 (343)
                      .||+.-|.++.|.  .+.+++|+.||+|++||+..+.         ++.++. |.+.|..+.|.
T Consensus       397 eGHEeLvRciRFd--~krIVSGaYDGkikvWdl~aaldpra~~~~~Cl~~lv~hsgRVFrLQFD  458 (499)
T KOG0281|consen  397 EGHEELVRCIRFD--NKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFD  458 (499)
T ss_pred             hchHHhhhheeec--CceeeeccccceEEEEecccccCCcccccchHHHhhhhccceeEEEeec
Confidence            9999999999994  5689999999999999997653         233333 88888888885

>KOG0265|consensus

Probab=100.00  E-value=3.8e-37  Score=226.99  Aligned_cols=265  Identities=19%  Similarity=0.234  Sum_probs=227.4

Q ss_pred             eEEEecCCCCeEEEEecC-CceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEE
Q psy10867          6 EVAFSYDGSGAISVWEPK-GGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSM   84 (343)
Q Consensus         6 ~~~~s~~~dg~i~iwd~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~   84 (343)
                      .+.+|++.|..|.+|++. .-+-...+++|.+ +|..+.|.+|+..+.+++.|.+++.||.++++.++....|...|+.+
T Consensus        60 s~~aSgG~Dr~I~LWnv~gdceN~~~lkgHsg-AVM~l~~~~d~s~i~S~gtDk~v~~wD~~tG~~~rk~k~h~~~vNs~  138 (338)
T KOG0265|consen   60 SCFASGGSDRAIVLWNVYGDCENFWVLKGHSG-AVMELHGMRDGSHILSCGTDKTVRGWDAETGKRIRKHKGHTSFVNSL  138 (338)
T ss_pred             CeEeecCCcceEEEEeccccccceeeeccccc-eeEeeeeccCCCEEEEecCCceEEEEecccceeeehhccccceeeec
Confidence            344455558999999954 4566778999999 99999999999999998888999999999999999999999999999


Q ss_pred             EECCCCCEEEE--ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCC
Q psy10867         85 QASPDAAYIAV--SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIP  162 (343)
Q Consensus        85 ~~s~~~~~l~~--~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~  162 (343)
                      .-+.-|..|++  +.|+++++||+++...++++. ..-+++++.|..++..+++|+-|+.|++||++...          
T Consensus       139 ~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~-~kyqltAv~f~d~s~qv~sggIdn~ikvWd~r~~d----------  207 (338)
T KOG0265|consen  139 DPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFE-NKYQLTAVGFKDTSDQVISGGIDNDIKVWDLRKND----------  207 (338)
T ss_pred             CccccCCeEEEecCCCceEEEEeecccchhhccc-cceeEEEEEecccccceeeccccCceeeeccccCc----------
Confidence            85555666664  578999999999988888775 35579999999999999999999999999998863          


Q ss_pred             CCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCC----ceEEEee-----cCCcEEEEE
Q psy10867        163 GSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTG----EDLLSLI-----LDTRLTCVA  233 (343)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~----~~~~~~~-----~~~~i~~~~  233 (343)
                                  ....+.+|..+|+.+..+|+|  .++.+-+.|.++++||++..    +++..+.     .+.....++
T Consensus       208 ------------~~~~lsGh~DtIt~lsls~~g--s~llsnsMd~tvrvwd~rp~~p~~R~v~if~g~~hnfeknlL~cs  273 (338)
T KOG0265|consen  208 ------------GLYTLSGHADTITGLSLSRYG--SFLLSNSMDNTVRVWDVRPFAPSQRCVKIFQGHIHNFEKNLLKCS  273 (338)
T ss_pred             ------------ceEEeecccCceeeEEeccCC--CccccccccceEEEEEecccCCCCceEEEeecchhhhhhhcceee
Confidence                        677888999999999999999  89999999999999999853    3344444     234567789


Q ss_pred             EcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEe
Q psy10867        234 FDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWH  307 (343)
Q Consensus       234 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd  307 (343)
                      |+|+++.+.+|+.|..+++||......           +..++||.+.|.+++|+|...+|.+++.|.+|++=+
T Consensus       274 wsp~~~~i~ags~dr~vyvwd~~~r~~-----------lyklpGh~gsvn~~~Fhp~e~iils~~sdk~i~lge  336 (338)
T KOG0265|consen  274 WSPNGTKITAGSADRFVYVWDTTSRRI-----------LYKLPGHYGSVNEVDFHPTEPIILSCSSDKTIYLGE  336 (338)
T ss_pred             ccCCCCccccccccceEEEeecccccE-----------EEEcCCcceeEEEeeecCCCcEEEEeccCceeEeec
Confidence            999999999999999999999876332           667899999999999999999999999999998743

>KOG0306|consensus

Probab=100.00  E-value=8e-37  Score=250.98  Aligned_cols=300  Identities=18%  Similarity=0.254  Sum_probs=251.0

Q ss_pred             CCeEEEEecCC-ceE--------EEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEE
Q psy10867         14 SGAISVWEPKG-GTL--------LMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSM   84 (343)
Q Consensus        14 dg~i~iwd~~~-~~~--------~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~   84 (343)
                      ++++..+.++. +..        -.++.+|.. .|++++++.+..+++++.. +.+++|+..+.++++++..  +.+.+.
T Consensus       343 nNtv~~ysl~~s~~~~p~~~~~~~i~~~GHR~-dVRsl~vS~d~~~~~Sga~-~SikiWn~~t~kciRTi~~--~y~l~~  418 (888)
T KOG0306|consen  343 NNTVEWYSLENSGKTSPEADRTSNIEIGGHRS-DVRSLCVSSDSILLASGAG-ESIKIWNRDTLKCIRTITC--GYILAS  418 (888)
T ss_pred             cCceEEEEeccCCCCCccccccceeeeccchh-heeEEEeecCceeeeecCC-CcEEEEEccCcceeEEecc--ccEEEE
Confidence            34566666543 111        135778988 9999999999999999988 8999999999999987643  388999


Q ss_pred             EECCCCCEEEEe-cCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCC
Q psy10867         85 QASPDAAYIAVS-IETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPG  163 (343)
Q Consensus        85 ~~s~~~~~l~~~-~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~  163 (343)
                      .|-|.+++++.| ..|.+.+||+.+...+.+.++|.+.+..++.+||++.+++|+.|.+|++||..-.....       +
T Consensus       419 ~Fvpgd~~Iv~G~k~Gel~vfdlaS~~l~Eti~AHdgaIWsi~~~pD~~g~vT~saDktVkfWdf~l~~~~~-------g  491 (888)
T KOG0306|consen  419 KFVPGDRYIVLGTKNGELQVFDLASASLVETIRAHDGAIWSISLSPDNKGFVTGSADKTVKFWDFKLVVSVP-------G  491 (888)
T ss_pred             EecCCCceEEEeccCCceEEEEeehhhhhhhhhccccceeeeeecCCCCceEEecCCcEEEEEeEEEEeccC-------c
Confidence            999999988875 67899999999999999999999999999999999999999999999999986432100       0


Q ss_pred             CCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCCEEE
Q psy10867        164 SSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIY  242 (343)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~  242 (343)
                      ....-.  .-+..+. -.-...|.|+.++|++  .+|+.+--|.++++|-+++.+....+. |.-||.|+.++||++.++
T Consensus       492 t~~k~l--sl~~~rt-Lel~ddvL~v~~Spdg--k~LaVsLLdnTVkVyflDtlKFflsLYGHkLPV~smDIS~DSkliv  566 (888)
T KOG0306|consen  492 TQKKVL--SLKHTRT-LELEDDVLCVSVSPDG--KLLAVSLLDNTVKVYFLDTLKFFLSLYGHKLPVLSMDISPDSKLIV  566 (888)
T ss_pred             ccceee--eeccceE-EeccccEEEEEEcCCC--cEEEEEeccCeEEEEEecceeeeeeecccccceeEEeccCCcCeEE
Confidence            000000  0000111 1245679999999999  899999999999999999988766665 888999999999999999


Q ss_pred             EEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc-cCC
Q psy10867        243 MGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-HKG  321 (343)
Q Consensus       243 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~  321 (343)
                      +|+.|..|++|-+.-+           .|...+-+|.+.|.++.|-|+...+++++.|+.|+-||-...+.++.+. |..
T Consensus       567 TgSADKnVKiWGLdFG-----------DCHKS~fAHdDSvm~V~F~P~~~~FFt~gKD~kvKqWDg~kFe~iq~L~~H~~  635 (888)
T KOG0306|consen  567 TGSADKNVKIWGLDFG-----------DCHKSFFAHDDSVMSVQFLPKTHLFFTCGKDGKVKQWDGEKFEEIQKLDGHHS  635 (888)
T ss_pred             eccCCCceEEeccccc-----------hhhhhhhcccCceeEEEEcccceeEEEecCcceEEeechhhhhhheeeccchh
Confidence            9999999999988764           4466788999999999999999999999999999999999999999999 999


Q ss_pred             ceEEEEEccCCCeeeeccc
Q psy10867        322 PVLGAFLGLLPPAIHDYDF  340 (343)
Q Consensus       322 ~v~~~~~sp~~~~l~~~~~  340 (343)
                      .|++++.+|+|.++++++-
T Consensus       636 ev~cLav~~~G~~vvs~sh  654 (888)
T KOG0306|consen  636 EVWCLAVSPNGSFVVSSSH  654 (888)
T ss_pred             eeeeeEEcCCCCeEEeccC
Confidence            9999999999999999874

>KOG0293|consensus

Probab=100.00  E-value=9.9e-38  Score=239.65  Aligned_cols=275  Identities=17%  Similarity=0.217  Sum_probs=232.4

Q ss_pred             EEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCccc---ceecccCCcceEEEEECCCCCEEEE-ecCCeEEE
Q psy10867         28 LMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEK---AQLRLICPGRISSMQASPDAAYIAV-SIETKLHM  103 (343)
Q Consensus        28 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~---~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v  103 (343)
                      .+.+..|.+ .|.-+.||++|+++|+++.|.+..+|.+.....   .+++.+|..+|..+.||||.++|++ +.+..+.+
T Consensus       217 ~qil~~htd-EVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~l  295 (519)
T KOG0293|consen  217 WQILQDHTD-EVWFLQFSHNGKYLASASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDEVLSL  295 (519)
T ss_pred             hhhHhhCCC-cEEEEEEcCCCeeEeeccCCceEEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecCchHheee
Confidence            455778998 999999999999999999999999998765544   4667799999999999999998886 67888999


Q ss_pred             EEccCCceEEEec-ccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecc-
Q psy10867        104 WQISSGRLLATAS-SHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQ-  181 (343)
Q Consensus       104 ~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  181 (343)
                      ||+.+|.....+. ++...+.+++|.|||..+++|+.|+.+..||++....                       ...++ 
T Consensus       296 wDv~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlDgn~~-----------------------~~W~gv  352 (519)
T KOG0293|consen  296 WDVDTGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPDRTIIMWDLDGNIL-----------------------GNWEGV  352 (519)
T ss_pred             ccCCcchhhhhcccCcCCCcceeEEccCCceeEecCCCCcEEEecCCcchh-----------------------hccccc
Confidence            9999999887775 3457899999999999999999999999999987531                       11111 


Q ss_pred             cccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeeccccc
Q psy10867        182 HSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRT  261 (343)
Q Consensus       182 ~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~  261 (343)
                      ....|.++++.++|  +++++.+.|..|++++.++......+..+.+|++++.+.+++++++.-.+..+++||++.... 
T Consensus       353 r~~~v~dlait~Dg--k~vl~v~~d~~i~l~~~e~~~dr~lise~~~its~~iS~d~k~~LvnL~~qei~LWDl~e~~l-  429 (519)
T KOG0293|consen  353 RDPKVHDLAITYDG--KYVLLVTVDKKIRLYNREARVDRGLISEEQPITSFSISKDGKLALVNLQDQEIHLWDLEENKL-  429 (519)
T ss_pred             ccceeEEEEEcCCC--cEEEEEecccceeeechhhhhhhccccccCceeEEEEcCCCcEEEEEcccCeeEEeecchhhH-
Confidence            22568999999999  789999999999999998877777777889999999999999999999999999999985433 


Q ss_pred             ccccccCCCCCCccccccCc--EEEEEEcc-CCCEEEEEeCCCcEEEEecccceeeeecc-cCCceEEEEEccCCCeeee
Q psy10867        262 RDHHIQDSTSNPDFIGHEKQ--VTSLSCSI-TGITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVLGAFLGLLPPAIHD  337 (343)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~~~--v~~~~~s~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~  337 (343)
                                +..+.||...  +..-+|-- +..++++||+|+.|+||+..+|+++..+. |...|++++|+|..+.+++
T Consensus       430 ----------v~kY~Ghkq~~fiIrSCFgg~~~~fiaSGSED~kvyIWhr~sgkll~~LsGHs~~vNcVswNP~~p~m~A  499 (519)
T KOG0293|consen  430 ----------VRKYFGHKQGHFIIRSCFGGGNDKFIASGSEDSKVYIWHRISGKLLAVLSGHSKTVNCVSWNPADPEMFA  499 (519)
T ss_pred             ----------HHHhhcccccceEEEeccCCCCcceEEecCCCceEEEEEccCCceeEeecCCcceeeEEecCCCCHHHhh
Confidence                      4556777654  33334544 44799999999999999999999999999 9999999999998877655


Q ss_pred             cc
Q psy10867        338 YD  339 (343)
Q Consensus       338 ~~  339 (343)
                      ++
T Consensus       500 Sa  501 (519)
T KOG0293|consen  500 SA  501 (519)
T ss_pred             cc
Confidence            43

>KOG0278|consensus

Probab=100.00  E-value=2.1e-38  Score=228.11  Aligned_cols=271  Identities=17%  Similarity=0.221  Sum_probs=239.5

Q ss_pred             ceEEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEE
Q psy10867          5 NEVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSM   84 (343)
Q Consensus         5 ~~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~   84 (343)
                      .-.++|++.||.-.+-+-++|.-+.+|.+|++ +|.+..++.+....|++..|-+-++||.-++..+..+ .|..-|.++
T Consensus        29 g~flisa~kd~~pmlr~g~tgdwigtfeghkg-avw~~~l~~na~~aasaaadftakvw~a~tgdelhsf-~hkhivk~~  106 (334)
T KOG0278|consen   29 GYFLISASKDGKPMLRNGDTGDWIGTFEGHKG-AVWSATLNKNATRAASAAADFTAKVWDAVTGDELHSF-EHKHIVKAV  106 (334)
T ss_pred             ceEEEEeccCCCchhccCCCCCcEEeeeccCc-ceeeeecCchhhhhhhhcccchhhhhhhhhhhhhhhh-hhhheeeeE
Confidence            34566777788777888888999999999999 9999999999999999999999999999999988766 788899999


Q ss_pred             EECCCCCEEEE-ecCCeEEEEEccCC-ceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCC
Q psy10867         85 QASPDAAYIAV-SIETKLHMWQISSG-RLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIP  162 (343)
Q Consensus        85 ~~s~~~~~l~~-~~d~~i~v~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~  162 (343)
                      +|+.|.++|++ +.+..++|||++.. .+...+.+|.+.|..+.|....+.|++.+.|++|++||.+++...+.+.    
T Consensus       107 af~~ds~~lltgg~ekllrvfdln~p~App~E~~ghtg~Ir~v~wc~eD~~iLSSadd~tVRLWD~rTgt~v~sL~----  182 (334)
T KOG0278|consen  107 AFSQDSNYLLTGGQEKLLRVFDLNRPKAPPKEISGHTGGIRTVLWCHEDKCILSSADDKTVRLWDHRTGTEVQSLE----  182 (334)
T ss_pred             EecccchhhhccchHHHhhhhhccCCCCCchhhcCCCCcceeEEEeccCceEEeeccCCceEEEEeccCcEEEEEe----
Confidence            99999998887 67889999999765 4567888999999999999988999999999999999999997666553    


Q ss_pred             CCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEE
Q psy10867        163 GSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIY  242 (343)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~  242 (343)
                                         -..+|+++.++++|   .+++....+.|.+||..+...++.+..+..|.+...+|+...++
T Consensus       183 -------------------~~s~VtSlEvs~dG---~ilTia~gssV~Fwdaksf~~lKs~k~P~nV~SASL~P~k~~fV  240 (334)
T KOG0278|consen  183 -------------------FNSPVTSLEVSQDG---RILTIAYGSSVKFWDAKSFGLLKSYKMPCNVESASLHPKKEFFV  240 (334)
T ss_pred             -------------------cCCCCcceeeccCC---CEEEEecCceeEEeccccccceeeccCccccccccccCCCceEE
Confidence                               55789999999998   35666677899999999999999999999999999999999999


Q ss_pred             EEcCCCcEEEEEeecccccccccccCCCCCCc-cccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceee
Q psy10867        243 MGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPD-FIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCL  314 (343)
Q Consensus       243 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~  314 (343)
                      +|+.|..++.||..+....           .. .++|.++|.|+.|+|||...++||+||+|++|.+..++..
T Consensus       241 aGged~~~~kfDy~TgeEi-----------~~~nkgh~gpVhcVrFSPdGE~yAsGSEDGTirlWQt~~~~~~  302 (334)
T KOG0278|consen  241 AGGEDFKVYKFDYNTGEEI-----------GSYNKGHFGPVHCVRFSPDGELYASGSEDGTIRLWQTTPGKTY  302 (334)
T ss_pred             ecCcceEEEEEeccCCcee-----------eecccCCCCceEEEEECCCCceeeccCCCceEEEEEecCCCch
Confidence            9999999999999987653           33 3789999999999999999999999999999998766544

>PLN00181 protein SPA1-RELATED; Provisional

Probab=100.00  E-value=8.5e-36  Score=269.27  Aligned_cols=275  Identities=16%  Similarity=0.195  Sum_probs=217.2

Q ss_pred             EEEecCCCCeEEEEecCCc----e----EEEEEecCCCCcceEEEEeCC-ceEEEEEcCCCeEEEEeCCCcccceecccC
Q psy10867          7 VAFSYDGSGAISVWEPKGG----T----LLMSYKGASVLSPHSMCLLGN-DYVLGVEKGKPMIQAWPVNSQEKAQLRLIC   77 (343)
Q Consensus         7 ~~~s~~~dg~i~iwd~~~~----~----~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~   77 (343)
                      ++++++.|+.|+|||..+.    .    +...+.++ . .+.+++|+|. +.++++++.||.|++||+.+++.+..+..|
T Consensus       497 ~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~~~-~-~v~~l~~~~~~~~~las~~~Dg~v~lWd~~~~~~~~~~~~H  574 (793)
T PLN00181        497 FFATAGVNKKIKIFECESIIKDGRDIHYPVVELASR-S-KLSGICWNSYIKSQVASSNFEGVVQVWDVARSQLVTEMKEH  574 (793)
T ss_pred             EEEEEeCCCEEEEEECCcccccccccccceEEeccc-C-ceeeEEeccCCCCEEEEEeCCCeEEEEECCCCeEEEEecCC
Confidence            3445555899999997531    1    22334433 4 7899999874 678888888899999999998888888899


Q ss_pred             CcceEEEEECC-CCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEe-cCCCEEEEecCCCeEEEeecCcccee
Q psy10867         78 PGRISSMQASP-DAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWS-ADSNFIVTGGEDGTICVWQLSRLICK  154 (343)
Q Consensus        78 ~~~v~~~~~s~-~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~s~~~dg~i~iwd~~~~~~~  154 (343)
                      .+.|.+++|+| ++.+|++ +.|+.|++||+.++..+..+..+ ..+.++.|+ +++.+|++|+.||.|++||++.... 
T Consensus       575 ~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~~-~~v~~v~~~~~~g~~latgs~dg~I~iwD~~~~~~-  652 (793)
T PLN00181        575 EKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTK-ANICCVQFPSESGRSLAFGSADHKVYYYDLRNPKL-  652 (793)
T ss_pred             CCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEecC-CCeEEEEEeCCCCCEEEEEeCCCeEEEEECCCCCc-
Confidence            99999999997 7788876 67999999999999888888754 679999995 4789999999999999999986421 


Q ss_pred             eeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCC------ceEEEee-cCC
Q psy10867        155 QTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTG------EDLLSLI-LDT  227 (343)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~------~~~~~~~-~~~  227 (343)
                                          +...+.+|...|.++.|. ++  .++++++.|++|++||++.+      +.+..+. |..
T Consensus       653 --------------------~~~~~~~h~~~V~~v~f~-~~--~~lvs~s~D~~ikiWd~~~~~~~~~~~~l~~~~gh~~  709 (793)
T PLN00181        653 --------------------PLCTMIGHSKTVSYVRFV-DS--STLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTN  709 (793)
T ss_pred             --------------------cceEecCCCCCEEEEEEe-CC--CEEEEEECCCEEEEEeCCCCccccCCcceEEEcCCCC
Confidence                                344566899999999997 44  68999999999999999753      4555555 677


Q ss_pred             cEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCC--CccccccCcEEEEEEccCCCEEEEEeCCCcEEE
Q psy10867        228 RLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSN--PDFIGHEKQVTSLSCSITGITLLSSSADETLKI  305 (343)
Q Consensus       228 ~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~--~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~i  305 (343)
                      .+..++|+|++++|++|+.|+.|++|+.........+........  .....|...|.+++|+|++..|++|+.||.|++
T Consensus       710 ~i~~v~~s~~~~~lasgs~D~~v~iw~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~V~~v~ws~~~~~lva~~~dG~I~i  789 (793)
T PLN00181        710 VKNFVGLSVSDGYIATGSETNEVFVYHKAFPMPVLSYKFKTIDPVSGLEVDDASQFISSVCWRGQSSTLVAANSTGNIKI  789 (793)
T ss_pred             CeeEEEEcCCCCEEEEEeCCCEEEEEECCCCCceEEEecccCCcccccccCCCCcEEEEEEEcCCCCeEEEecCCCcEEE
Confidence            789999999999999999999999999765432211111111111  112346678999999999999999999999999


Q ss_pred             Eec
Q psy10867        306 WHT  308 (343)
Q Consensus       306 wd~  308 (343)
                      |++
T Consensus       790 ~~~  792 (793)
T PLN00181        790 LEM  792 (793)
T ss_pred             Eec
Confidence            996

>KOG1446|consensus

Probab=100.00  E-value=9.1e-36  Score=221.56  Aligned_cols=277  Identities=13%  Similarity=0.127  Sum_probs=229.3

Q ss_pred             eEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCC-EEEEe--cCCeEE
Q psy10867         26 TLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAA-YIAVS--IETKLH  102 (343)
Q Consensus        26 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~--~d~~i~  102 (343)
                      ++.+.+..... .|.++.|+++|.+++++++|..++|||..+++.++....++..+..+.|..... .+.++  .|.+|+
T Consensus         5 ~~ak~f~~~~~-~i~sl~fs~~G~~litss~dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tIr   83 (311)
T KOG1446|consen    5 RPAKVFRETNG-KINSLDFSDDGLLLITSSEDDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTIR   83 (311)
T ss_pred             ccccccccCCC-ceeEEEecCCCCEEEEecCCCeEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccCCCCCceE
Confidence            44455666566 999999999999999888888999999999999988888888899999976554 44444  488999


Q ss_pred             EEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeeccc
Q psy10867        103 MWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQH  182 (343)
Q Consensus       103 v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (343)
                      ..++.+.+.++.+.||...|..++.+|-++.+++++.|++|++||++..++..-+                        +
T Consensus        84 yLsl~dNkylRYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l------------------------~  139 (311)
T KOG1446|consen   84 YLSLHDNKYLRYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLL------------------------N  139 (311)
T ss_pred             EEEeecCceEEEcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEE------------------------e
Confidence            9999999999999999999999999998899999999999999999976554322                        2


Q ss_pred             ccceEEEEeecCCCceEEEEeeCCCeEEEEecCCC--ceEEEee----cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEee
Q psy10867        183 SLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTG--EDLLSLI----LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLR  256 (343)
Q Consensus       183 ~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~--~~~~~~~----~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~  256 (343)
                      ...-..++|.|.|  -++|++.....|++||++..  .+..++.    .....+.+.|+|+|++|+.++..+.+++.|.-
T Consensus       140 ~~~~pi~AfDp~G--LifA~~~~~~~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf  217 (311)
T KOG1446|consen  140 LSGRPIAAFDPEG--LIFALANGSELIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAF  217 (311)
T ss_pred             cCCCcceeECCCC--cEEEEecCCCeEEEEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEcc
Confidence            2334468999999  78888888779999999864  3444444    24568999999999999999999999999988


Q ss_pred             cccccccccccCCCCCCccccccCc---EEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc--cCCceEEEEEccC
Q psy10867        257 QVPRTRDHHIQDSTSNPDFIGHEKQ---VTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ--HKGPVLGAFLGLL  331 (343)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~---v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~--~~~~v~~~~~sp~  331 (343)
                      .+....           .+.++...   ....+|+||++++++|+.||+|.+|++++|+.+..++  +.+++.++.|+|.
T Consensus       218 ~G~~~~-----------tfs~~~~~~~~~~~a~ftPds~Fvl~gs~dg~i~vw~~~tg~~v~~~~~~~~~~~~~~~fnP~  286 (311)
T KOG1446|consen  218 DGTVKS-----------TFSGYPNAGNLPLSATFTPDSKFVLSGSDDGTIHVWNLETGKKVAVLRGPNGGPVSCVRFNPR  286 (311)
T ss_pred             CCcEee-----------eEeeccCCCCcceeEEECCCCcEEEEecCCCcEEEEEcCCCcEeeEecCCCCCCccccccCCc
Confidence            766433           33333222   2567899999999999999999999999999999998  5889999999999


Q ss_pred             CCeeeeccc
Q psy10867        332 PPAIHDYDF  340 (343)
Q Consensus       332 ~~~l~~~~~  340 (343)
                      -..+++++-
T Consensus       287 ~~mf~sa~s  295 (311)
T KOG1446|consen  287 YAMFVSASS  295 (311)
T ss_pred             eeeeeecCc
Confidence            988888763

>KOG0313|consensus

Probab=100.00  E-value=4.4e-37  Score=233.48  Aligned_cols=289  Identities=21%  Similarity=0.274  Sum_probs=231.4

Q ss_pred             cceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECC-CCC---EEEEecCCeEEEEEccCCce--
Q psy10867         38 SPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASP-DAA---YIAVSIETKLHMWQISSGRL--  111 (343)
Q Consensus        38 ~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~-~~~---~l~~~~d~~i~v~~~~~~~~--  111 (343)
                      .|.++...  +..+.+|+.||.+++|+.. |+......+|.++|.+++|.- +..   ++.++.|.++++|.++.++.  
T Consensus       107 WVSsv~~~--~~~IltgsYDg~~riWd~~-Gk~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~~~~~~~  183 (423)
T KOG0313|consen  107 WVSSVKGA--SKWILTGSYDGTSRIWDLK-GKSIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLWKWNVGENKV  183 (423)
T ss_pred             hhhhhccc--CceEEEeecCCeeEEEecC-CceEEEEecCCcceeeeEEEecCCccceEEEecCCceEEEEEecCchhhh
Confidence            56666655  5667777777999999976 555667789999999888743 332   45568999999999987754  


Q ss_pred             --EEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCC----CCCCCccccccceeeeecccccc
Q psy10867        112 --LATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIP----GSSGKGVTGLTEPLHVKSQHSLP  185 (343)
Q Consensus       112 --~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~  185 (343)
                        +....+|...|.++...+++..+++|+.|..|++|+.... ...+++....    ............++..+.+|..+
T Consensus       184 ~~~~~~~GHk~~V~sVsv~~sgtr~~SgS~D~~lkiWs~~~~-~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~  262 (423)
T KOG0313|consen  184 KALKVCRGHKRSVDSVSVDSSGTRFCSGSWDTMLKIWSVETD-EEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEP  262 (423)
T ss_pred             hHHhHhcccccceeEEEecCCCCeEEeecccceeeecccCCC-ccccccccchhhhhhhhhhhcccccCceEEecccccc
Confidence              3344599999999999999999999999999999993322 1111110000    00111223445688899999999


Q ss_pred             eEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeeccccccccc
Q psy10867        186 VTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHH  265 (343)
Q Consensus       186 v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~  265 (343)
                      |.++.|++.   ..+++++.|.+|+.||+.++....++..+..+.++.++|..++|++|+.|..+++||.+......   
T Consensus       263 Vs~V~w~d~---~v~yS~SwDHTIk~WDletg~~~~~~~~~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs~---  336 (423)
T KOG0313|consen  263 VSSVVWSDA---TVIYSVSWDHTIKVWDLETGGLKSTLTTNKSLNCISYSPLSKLLASGSSDRHIRLWDPRTGDGSV---  336 (423)
T ss_pred             eeeEEEcCC---CceEeecccceEEEEEeecccceeeeecCcceeEeecccccceeeecCCCCceeecCCCCCCCce---
Confidence            999999995   58999999999999999999999999999999999999999999999999999999999864322   


Q ss_pred             ccCCCCCCccccccCcEEEEEEccCC-CEEEEEeCCCcEEEEecccce-eeeecc-cCCceEEEEEccCCCeeeecccCC
Q psy10867        266 IQDSTSNPDFIGHEKQVTSLSCSITG-ITLLSSSADETLKIWHTISRQ-CLRTIQ-HKGPVLGAFLGLLPPAIHDYDFTP  342 (343)
Q Consensus       266 ~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~s~~~dg~i~iwd~~~~~-~~~~~~-~~~~v~~~~~sp~~~~l~~~~~~~  342 (343)
                           ....+.+|++.|.++.|+|.. ..|++++.|+++++||+++-+ ++..+. |...|.++.|. ++.+|++|+...
T Consensus       337 -----v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~plydI~~h~DKvl~vdW~-~~~~IvSGGaD~  410 (423)
T KOG0313|consen  337 -----VSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKAPLYDIAGHNDKVLSVDWN-EGGLIVSGGADN  410 (423)
T ss_pred             -----eEEeeecchhhhhheecCCCCceEEEEEecCCeEEEEEeccCCCcceeeccCCceEEEEecc-CCceEEeccCcc
Confidence                 256788999999999999965 467899999999999999876 888887 99999999998 567788887543

>KOG0305|consensus

Probab=100.00  E-value=8.7e-37  Score=247.44  Aligned_cols=260  Identities=20%  Similarity=0.330  Sum_probs=230.6

Q ss_pred             CeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceeccc-CCcceEEEEECCCCCEE
Q psy10867         15 GAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLI-CPGRISSMQASPDAAYI   93 (343)
Q Consensus        15 g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l   93 (343)
                      ..|++|+..+++.......+.+ .|+++.|+++|.+|++|..+|.|.|||....+.+..+.. |...|.+++|.  +..+
T Consensus       197 ~~vylW~~~s~~v~~l~~~~~~-~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k~~~~~~~~h~~rvg~laW~--~~~l  273 (484)
T KOG0305|consen  197 QSVYLWSASSGSVTELCSFGEE-LVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQKKTRTLRGSHASRVGSLAWN--SSVL  273 (484)
T ss_pred             ceEEEEecCCCceEEeEecCCC-ceEEEEECCCCCEEEEeecCCeEEEEehhhccccccccCCcCceeEEEecc--CceE
Confidence            3799999999987766666666 999999999999999999999999999999888877777 99999999998  4455


Q ss_pred             EE-ecCCeEEEEEccCCceEEE-ecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCcccc
Q psy10867         94 AV-SIETKLHMWQISSGRLLAT-ASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTG  171 (343)
Q Consensus        94 ~~-~~d~~i~v~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  171 (343)
                      .+ +.++.|..+|++..+.... +.+|...|..+.|++|+.++++|+.|+.+.|||....                    
T Consensus       274 ssGsr~~~I~~~dvR~~~~~~~~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~--------------------  333 (484)
T KOG0305|consen  274 SSGSRDGKILNHDVRISQHVVSTLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLSP--------------------  333 (484)
T ss_pred             EEecCCCcEEEEEEecchhhhhhhhcccceeeeeEECCCCCeeccCCCccceEeccCCCc--------------------
Confidence            54 6899999999998866555 8899999999999999999999999999999999554                    


Q ss_pred             ccceeeeecccccceEEEEeecCCCceEEEEee--CCCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEE--EcCC
Q psy10867        172 LTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVS--HDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYM--GTSE  247 (343)
Q Consensus       172 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~--~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~--~~~d  247 (343)
                        ++...+..|...|.+++|+|-.. .+||+|+  .|+.|++||..+++.+..+...+.|.++.|++..+.|++  |..+
T Consensus       334 --~p~~~~~~H~aAVKA~awcP~q~-~lLAsGGGs~D~~i~fwn~~~g~~i~~vdtgsQVcsL~Wsk~~kEi~sthG~s~  410 (484)
T KOG0305|consen  334 --EPKFTFTEHTAAVKALAWCPWQS-GLLATGGGSADRCIKFWNTNTGARIDSVDTGSQVCSLIWSKKYKELLSTHGYSE  410 (484)
T ss_pred             --cccEEEeccceeeeEeeeCCCcc-CceEEcCCCcccEEEEEEcCCCcEecccccCCceeeEEEcCCCCEEEEecCCCC
Confidence              36677789999999999999876 6888864  599999999999999999999999999999999987777  5668


Q ss_pred             CcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccc
Q psy10867        248 GVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISR  311 (343)
Q Consensus       248 ~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~  311 (343)
                      +.|.||++.+...           +..+.+|...|..++++|||..+++|+.|.++++|++-..
T Consensus       411 n~i~lw~~ps~~~-----------~~~l~gH~~RVl~la~SPdg~~i~t~a~DETlrfw~~f~~  463 (484)
T KOG0305|consen  411 NQITLWKYPSMKL-----------VAELLGHTSRVLYLALSPDGETIVTGAADETLRFWNLFDE  463 (484)
T ss_pred             CcEEEEeccccce-----------eeeecCCcceeEEEEECCCCCEEEEecccCcEEeccccCC
Confidence            8999999987544           5678899999999999999999999999999999998764

>KOG1407|consensus

Probab=100.00  E-value=3.4e-36  Score=217.90  Aligned_cols=275  Identities=16%  Similarity=0.203  Sum_probs=236.2

Q ss_pred             EEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccce--ecccCCcceEEEEECCCC-CEEEE-ecCCeEEEE
Q psy10867         29 MSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQ--LRLICPGRISSMQASPDA-AYIAV-SIETKLHMW  104 (343)
Q Consensus        29 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~--~~~~~~~~v~~~~~s~~~-~~l~~-~~d~~i~v~  104 (343)
                      +.+++|.. .+.+++|+.+|..+++|+-|+++.+|+++..+...  ...+|.+.|-.++|+|.. .++++ +.|.+|++|
T Consensus        14 r~~~~~~~-~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~ir~w   92 (313)
T KOG1407|consen   14 RELQGHVQ-KVHSVAWNCDGTKLASGSFDKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKTIRIW   92 (313)
T ss_pred             HHhhhhhh-cceEEEEcccCceeeecccCCceEEEEecchhhhhhhcccCCCcchhhheeCCCCCcceEEecCCceEEEE
Confidence            45677888 99999999999999999999999999999876553  344888999999999854 45554 789999999


Q ss_pred             EccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeeccccc
Q psy10867        105 QISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSL  184 (343)
Q Consensus       105 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (343)
                      |++.+++........+.+ -+.|+|+|++++.++.|..|...|.++.+....                       .....
T Consensus        93 d~r~~k~~~~i~~~~eni-~i~wsp~g~~~~~~~kdD~it~id~r~~~~~~~-----------------------~~~~~  148 (313)
T KOG1407|consen   93 DIRSGKCTARIETKGENI-NITWSPDGEYIAVGNKDDRITFIDARTYKIVNE-----------------------EQFKF  148 (313)
T ss_pred             EeccCcEEEEeeccCcce-EEEEcCCCCEEEEecCcccEEEEEecccceeeh-----------------------hcccc
Confidence            999999998887554444 689999999999999999999999998644332                       23456


Q ss_pred             ceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeeccccccc
Q psy10867        185 PVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRD  263 (343)
Q Consensus       185 ~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~  263 (343)
                      .+..++|+.++  .+++.....|.|.|......+++..++ |+....|+.|+|+|+++|+|+.|..+.+||+...-.   
T Consensus       149 e~ne~~w~~~n--d~Fflt~GlG~v~ILsypsLkpv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~ELiC---  223 (313)
T KOG1407|consen  149 EVNEISWNNSN--DLFFLTNGLGCVEILSYPSLKPVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVDELIC---  223 (313)
T ss_pred             eeeeeeecCCC--CEEEEecCCceEEEEeccccccccccccCCcceEEEEECCCCceEeeccccceeeccChhHhhh---
Confidence            67888998665  677777778999999999999999988 888999999999999999999999999999987543   


Q ss_pred             ccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecccCCceEEEEEccCCCeeeecccC
Q psy10867        264 HHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQHKGPVLGAFLGLLPPAIHDYDFT  341 (343)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~  341 (343)
                              +..+..+.-+|..+.||.||++||++|+|..|-|=++++|..+..+.+.++...++|+|...+|+-++-.
T Consensus       224 --------~R~isRldwpVRTlSFS~dg~~lASaSEDh~IDIA~vetGd~~~eI~~~~~t~tVAWHPk~~LLAyA~dd  293 (313)
T KOG1407|consen  224 --------ERCISRLDWPVRTLSFSHDGRMLASASEDHFIDIAEVETGDRVWEIPCEGPTFTVAWHPKRPLLAYACDD  293 (313)
T ss_pred             --------heeeccccCceEEEEeccCcceeeccCccceEEeEecccCCeEEEeeccCCceeEEecCCCceeeEEecC
Confidence                    4456778899999999999999999999999999999999999999999999999999999988876543

>KOG0296|consensus

Probab=100.00  E-value=4.1e-36  Score=227.12  Aligned_cols=287  Identities=18%  Similarity=0.209  Sum_probs=243.6

Q ss_pred             eEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-ecCCeEEEE
Q psy10867         26 TLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SIETKLHMW  104 (343)
Q Consensus        26 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~  104 (343)
                      ..+.+|..|.. +|.+++.+|+.+++++|+.|..-.+|+..+++....+.+|++.|+++.|+.||.+||+ ..+|.|+||
T Consensus        55 dS~~tF~~H~~-svFavsl~P~~~l~aTGGgDD~AflW~~~~ge~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~  133 (399)
T KOG0296|consen   55 DSLVTFDKHTD-SVFAVSLHPNNNLVATGGGDDLAFLWDISTGEFAGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVF  133 (399)
T ss_pred             cceeehhhcCC-ceEEEEeCCCCceEEecCCCceEEEEEccCCcceeEecCCCCceEEEEEccCceEEEecCCCccEEEE
Confidence            34678999999 9999999999999999999999999999999988888999999999999999999998 579999999


Q ss_pred             EccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeeccccc
Q psy10867        105 QISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSL  184 (343)
Q Consensus       105 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (343)
                      ...++.....+...-+.+.-+.|+|.+..|+.|+.||.+-.|.+.+..                      ..+.+.+|..
T Consensus       134 ~~stg~~~~~~~~e~~dieWl~WHp~a~illAG~~DGsvWmw~ip~~~----------------------~~kv~~Gh~~  191 (399)
T KOG0296|consen  134 KVSTGGEQWKLDQEVEDIEWLKWHPRAHILLAGSTDGSVWMWQIPSQA----------------------LCKVMSGHNS  191 (399)
T ss_pred             EcccCceEEEeecccCceEEEEecccccEEEeecCCCcEEEEECCCcc----------------------eeeEecCCCC
Confidence            999999888887666788899999999999999999999999998842                      5677789999


Q ss_pred             ceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee--cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccc
Q psy10867        185 PVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI--LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTR  262 (343)
Q Consensus       185 ~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~  262 (343)
                      ++++-.|.|+|  +.++++..||+|++||+.+++++..+.  ......++.++..+..++.|..++.+++-+..+++...
T Consensus       192 ~ct~G~f~pdG--Kr~~tgy~dgti~~Wn~ktg~p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~  269 (399)
T KOG0296|consen  192 PCTCGEFIPDG--KRILTGYDDGTIIVWNPKTGQPLHKITQAEGLELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVN  269 (399)
T ss_pred             CcccccccCCC--ceEEEEecCceEEEEecCCCceeEEecccccCcCCccccccccceeEeccCCccEEEEccccceEEE
Confidence            99999999999  899999999999999999999998887  34457888899899999999999988888766654433


Q ss_pred             cccccCCCCCCccccccCcEEEE---EEccCCCEEEEEeCCCcEEEEecccceeeeecccCCceEEEEEccCCCeeeecc
Q psy10867        263 DHHIQDSTSNPDFIGHEKQVTSL---SCSITGITLLSSSADETLKIWHTISRQCLRTIQHKGPVLGAFLGLLPPAIHDYD  339 (343)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~v~~~---~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~  339 (343)
                      ...   +........+...+.++   .++..=.+.|+|+-||+|.|||+...+....+.|..+|+.+.|-+ ..+|++++
T Consensus       270 ~~n---~~~~~l~~~~e~~~esve~~~~ss~lpL~A~G~vdG~i~iyD~a~~~~R~~c~he~~V~~l~w~~-t~~l~t~c  345 (399)
T KOG0296|consen  270 CNN---GTVPELKPSQEELDESVESIPSSSKLPLAACGSVDGTIAIYDLAASTLRHICEHEDGVTKLKWLN-TDYLLTAC  345 (399)
T ss_pred             ecC---CCCccccccchhhhhhhhhcccccccchhhcccccceEEEEecccchhheeccCCCceEEEEEcC-cchheeec
Confidence            221   01111122344444444   455555788999999999999999999989999999999999999 78888877


Q ss_pred             cC
Q psy10867        340 FT  341 (343)
Q Consensus       340 ~~  341 (343)
                      ..
T Consensus       346 ~~  347 (399)
T KOG0296|consen  346 AN  347 (399)
T ss_pred             cC
Confidence            54

>KOG0306|consensus

Probab=100.00  E-value=6.9e-36  Score=245.53  Aligned_cols=270  Identities=20%  Similarity=0.252  Sum_probs=236.7

Q ss_pred             ccceEEEecCC-------CCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecc
Q psy10867          3 LLNEVAFSYDG-------SGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRL   75 (343)
Q Consensus         3 ~v~~~~~s~~~-------dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~   75 (343)
                      .|..+.+|.+.       .+.+++|+..+.++++++...   -+.+..|-|.+++++.|...|.+.+||+.+...+....
T Consensus       375 dVRsl~vS~d~~~~~Sga~~SikiWn~~t~kciRTi~~~---y~l~~~Fvpgd~~Iv~G~k~Gel~vfdlaS~~l~Eti~  451 (888)
T KOG0306|consen  375 DVRSLCVSSDSILLASGAGESIKIWNRDTLKCIRTITCG---YILASKFVPGDRYIVLGTKNGELQVFDLASASLVETIR  451 (888)
T ss_pred             heeEEEeecCceeeeecCCCcEEEEEccCcceeEEeccc---cEEEEEecCCCceEEEeccCCceEEEEeehhhhhhhhh
Confidence            45556665554       478999999999999999876   56888999999999999999999999999999888888


Q ss_pred             cCCcceEEEEECCCCCEEEE-ecCCeEEEEEccC-----CceEEEec-------ccCCCeEEEEEecCCCEEEEecCCCe
Q psy10867         76 ICPGRISSMQASPDAAYIAV-SIETKLHMWQISS-----GRLLATAS-------SHYQPITIVKWSADSNFIVTGGEDGT  142 (343)
Q Consensus        76 ~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~-----~~~~~~~~-------~~~~~v~~~~~~~~~~~l~s~~~dg~  142 (343)
                      .|.+.|..++.+||++.+++ +.|.+|++||..-     |...+.+.       .-...|.|+.++||+++|+.+--|.+
T Consensus       452 AHdgaIWsi~~~pD~~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~Spdgk~LaVsLLdnT  531 (888)
T KOG0306|consen  452 AHDGAIWSISLSPDNKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCVSVSPDGKLLAVSLLDNT  531 (888)
T ss_pred             ccccceeeeeecCCCCceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEEeccccEEEEEEcCCCcEEEEEeccCe
Confidence            99999999999999998886 7899999999742     22111111       23567999999999999999999999


Q ss_pred             EEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEE
Q psy10867        143 ICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLS  222 (343)
Q Consensus       143 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~  222 (343)
                      |++|-+++.+                      ....+.+|.-||.|+..+|++  +++++||.|.+|++|-++-|.+-+.
T Consensus       532 VkVyflDtlK----------------------FflsLYGHkLPV~smDIS~DS--klivTgSADKnVKiWGLdFGDCHKS  587 (888)
T KOG0306|consen  532 VKVYFLDTLK----------------------FFLSLYGHKLPVLSMDISPDS--KLIVTGSADKNVKIWGLDFGDCHKS  587 (888)
T ss_pred             EEEEEeccee----------------------eeeeecccccceeEEeccCCc--CeEEeccCCCceEEeccccchhhhh
Confidence            9999999863                      566788999999999999999  8999999999999999999998877


Q ss_pred             ee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCC
Q psy10867        223 LI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADE  301 (343)
Q Consensus       223 ~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg  301 (343)
                      +- |+..|.++.|-|....+++++.|+.|+-||-...+.           +..+.+|...|++++.+|+|.+++++|.|.
T Consensus       588 ~fAHdDSvm~V~F~P~~~~FFt~gKD~kvKqWDg~kFe~-----------iq~L~~H~~ev~cLav~~~G~~vvs~shD~  656 (888)
T KOG0306|consen  588 FFAHDDSVMSVQFLPKTHLFFTCGKDGKVKQWDGEKFEE-----------IQKLDGHHSEVWCLAVSPNGSFVVSSSHDK  656 (888)
T ss_pred             hhcccCceeEEEEcccceeEEEecCcceEEeechhhhhh-----------heeeccchheeeeeEEcCCCCeEEeccCCc
Confidence            65 889999999999999999999999999999887655           667899999999999999999999999999


Q ss_pred             cEEEEeccc
Q psy10867        302 TLKIWHTIS  310 (343)
Q Consensus       302 ~i~iwd~~~  310 (343)
                      +|++|....
T Consensus       657 sIRlwE~td  665 (888)
T KOG0306|consen  657 SIRLWERTD  665 (888)
T ss_pred             eeEeeeccC
Confidence            999998654

>KOG0278|consensus

Probab=100.00  E-value=1.9e-37  Score=223.19  Aligned_cols=274  Identities=16%  Similarity=0.171  Sum_probs=244.3

Q ss_pred             EEEecCCCCcceEEEEe---CCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-ecCCeEEEE
Q psy10867         29 MSYKGASVLSPHSMCLL---GNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SIETKLHMW  104 (343)
Q Consensus        29 ~~~~~~~~~~v~~~~~~---~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~  104 (343)
                      .+-.+|.. +|..++|+   |+|.++.+++.|+.-.+-+-+++..+-++.+|.+.|.......+....|+ +.|-+-++|
T Consensus         8 l~c~ghtr-pvvdl~~s~itp~g~flisa~kd~~pmlr~g~tgdwigtfeghkgavw~~~l~~na~~aasaaadftakvw   86 (334)
T KOG0278|consen    8 LTCHGHTR-PVVDLAFSPITPDGYFLISASKDGKPMLRNGDTGDWIGTFEGHKGAVWSATLNKNATRAASAAADFTAKVW   86 (334)
T ss_pred             eEEcCCCc-ceeEEeccCCCCCceEEEEeccCCCchhccCCCCCcEEeeeccCcceeeeecCchhhhhhhhcccchhhhh
Confidence            45678888 99999999   58999999999999999999999999999999999999999877766665 578899999


Q ss_pred             EccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeeccccc
Q psy10867        105 QISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSL  184 (343)
Q Consensus       105 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (343)
                      |.-+|..+..+. |..-|..++|+.|.++|++|+.+.-+++||++..+.                     +...+.+|.+
T Consensus        87 ~a~tgdelhsf~-hkhivk~~af~~ds~~lltgg~ekllrvfdln~p~A---------------------pp~E~~ghtg  144 (334)
T KOG0278|consen   87 DAVTGDELHSFE-HKHIVKAVAFSQDSNYLLTGGQEKLLRVFDLNRPKA---------------------PPKEISGHTG  144 (334)
T ss_pred             hhhhhhhhhhhh-hhheeeeEEecccchhhhccchHHHhhhhhccCCCC---------------------CchhhcCCCC
Confidence            999999998885 888999999999999999999999999999988643                     6667789999


Q ss_pred             ceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccc
Q psy10867        185 PVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDH  264 (343)
Q Consensus       185 ~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~  264 (343)
                      .|..+.|+...  +.+++.+.|++||+||.++++.++++..+.+++++.++++|++|.++. .+.|.+||..+....+.+
T Consensus       145 ~Ir~v~wc~eD--~~iLSSadd~tVRLWD~rTgt~v~sL~~~s~VtSlEvs~dG~ilTia~-gssV~Fwdaksf~~lKs~  221 (334)
T KOG0278|consen  145 GIRTVLWCHED--KCILSSADDKTVRLWDHRTGTEVQSLEFNSPVTSLEVSQDGRILTIAY-GSSVKFWDAKSFGLLKSY  221 (334)
T ss_pred             cceeEEEeccC--ceEEeeccCCceEEEEeccCcEEEEEecCCCCcceeeccCCCEEEEec-CceeEEeccccccceeec
Confidence            99999999887  788888999999999999999999999999999999999999887764 667999999987665433


Q ss_pred             cccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeec-c-cCCceEEEEEccCCCeeeeccc
Q psy10867        265 HIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTI-Q-HKGPVLGAFLGLLPPAIHDYDF  340 (343)
Q Consensus       265 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~-~-~~~~v~~~~~sp~~~~l~~~~~  340 (343)
                      .            -...|.+..++|+...+++|++|+.++.||..+|+.+..+ + |.++|.++.|+|+|..-++++-
T Consensus       222 k------------~P~nV~SASL~P~k~~fVaGged~~~~kfDy~TgeEi~~~nkgh~gpVhcVrFSPdGE~yAsGSE  287 (334)
T KOG0278|consen  222 K------------MPCNVESASLHPKKEFFVAGGEDFKVYKFDYNTGEEIGSYNKGHFGPVHCVRFSPDGELYASGSE  287 (334)
T ss_pred             c------------CccccccccccCCCceEEecCcceEEEEEeccCCceeeecccCCCCceEEEEECCCCceeeccCC
Confidence            1            2456888999999999999999999999999999999987 4 9999999999999999888864

>KOG0288|consensus

Probab=100.00  E-value=2.8e-37  Score=236.97  Aligned_cols=280  Identities=20%  Similarity=0.272  Sum_probs=234.7

Q ss_pred             eEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcc--cceecccCCcceEEEEECCCCCEEE-EecCCeEE
Q psy10867         26 TLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQE--KAQLRLICPGRISSMQASPDAAYIA-VSIETKLH  102 (343)
Q Consensus        26 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~--~~~~~~~~~~~v~~~~~s~~~~~l~-~~~d~~i~  102 (343)
                      +....+..|.+ .+..+.|-++...+++|+.|..|++|+....+  .+..+.+..++|+.+.|.++++.++ ++.|+.++
T Consensus       166 ~~~~~ld~h~g-ev~~v~~l~~sdtlatgg~Dr~Ik~W~v~~~k~~~~~tLaGs~g~it~~d~d~~~~~~iAas~d~~~r  244 (459)
T KOG0288|consen  166 RALFVLDAHEG-EVHDVEFLRNSDTLATGGSDRIIKLWNVLGEKSELISTLAGSLGNITSIDFDSDNKHVIAASNDKNLR  244 (459)
T ss_pred             hhhhhhhcccc-ccceeEEccCcchhhhcchhhhhhhhhcccchhhhhhhhhccCCCcceeeecCCCceEEeecCCCcee
Confidence            34456778888 99999999996666666666999999988776  4567778888999999999887665 48999999


Q ss_pred             EEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeeccc
Q psy10867        103 MWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQH  182 (343)
Q Consensus       103 v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (343)
                      +|++.+.+...++.+|++.|+++.|......+++|+.|.+|++||+....+..++-                       .
T Consensus       245 ~Wnvd~~r~~~TLsGHtdkVt~ak~~~~~~~vVsgs~DRtiK~WDl~k~~C~kt~l-----------------------~  301 (459)
T KOG0288|consen  245 LWNVDSLRLRHTLSGHTDKVTAAKFKLSHSRVVSGSADRTIKLWDLQKAYCSKTVL-----------------------P  301 (459)
T ss_pred             eeeccchhhhhhhcccccceeeehhhccccceeeccccchhhhhhhhhhheecccc-----------------------c
Confidence            99999999999999999999999998877779999999999999999976655432                       2


Q ss_pred             ccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccc
Q psy10867        183 SLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTR  262 (343)
Q Consensus       183 ~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~  262 (343)
                      ...+..|..++    ..+++|-.|++|++||.++..........+.|+++..++++..|.+++.|..+.++|+++.....
T Consensus       302 ~S~cnDI~~~~----~~~~SgH~DkkvRfwD~Rs~~~~~sv~~gg~vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI~~  377 (459)
T KOG0288|consen  302 GSQCNDIVCSI----SDVISGHFDKKVRFWDIRSADKTRSVPLGGRVTSLDLSMDGLELLSSSRDDTLKVIDLRTKEIRQ  377 (459)
T ss_pred             cccccceEecc----eeeeecccccceEEEeccCCceeeEeecCcceeeEeeccCCeEEeeecCCCceeeeecccccEEE
Confidence            34455666653    56889999999999999999999999999999999999999999999999999999999876544


Q ss_pred             cccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc--cCC-ceEEEEEccCCCeeeecc
Q psy10867        263 DHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ--HKG-PVLGAFLGLLPPAIHDYD  339 (343)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~--~~~-~v~~~~~sp~~~~l~~~~  339 (343)
                      .+....     -..+  ...+.+.|||++.|+++||.||.|+||++.++++...+.  +.. .|++++|+|.|.+|++++
T Consensus       378 ~~sA~g-----~k~a--sDwtrvvfSpd~~YvaAGS~dgsv~iW~v~tgKlE~~l~~s~s~~aI~s~~W~~sG~~Llsad  450 (459)
T KOG0288|consen  378 TFSAEG-----FKCA--SDWTRVVFSPDGSYVAAGSADGSVYIWSVFTGKLEKVLSLSTSNAAITSLSWNPSGSGLLSAD  450 (459)
T ss_pred             Eeeccc-----cccc--cccceeEECCCCceeeeccCCCcEEEEEccCceEEEEeccCCCCcceEEEEEcCCCchhhccc
Confidence            332111     1112  237889999999999999999999999999999988887  333 699999999999999886


Q ss_pred             c
Q psy10867        340 F  340 (343)
Q Consensus       340 ~  340 (343)
                      -
T Consensus       451 k  451 (459)
T KOG0288|consen  451 K  451 (459)
T ss_pred             C
Confidence            3

>KOG0313|consensus

Probab=100.00  E-value=2.4e-35  Score=224.07  Aligned_cols=264  Identities=22%  Similarity=0.337  Sum_probs=220.4

Q ss_pred             eEEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEe-CC--ceEEEEEcCCCeEEEEeCCCcccc----eecccCC
Q psy10867          6 EVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLL-GN--DYVLGVEKGKPMIQAWPVNSQEKA----QLRLICP   78 (343)
Q Consensus         6 ~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~-~~--~~~~~~~~~~~~i~iw~~~~~~~~----~~~~~~~   78 (343)
                      .-++|++.||.+++||. .|+...++.+|.+ ++.++++. ++  ...+++++.|.++++|..+.++..    +...+|.
T Consensus       116 ~~IltgsYDg~~riWd~-~Gk~~~~~~Ght~-~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~~~~~~~~~~~~~~GHk  193 (423)
T KOG0313|consen  116 KWILTGSYDGTSRIWDL-KGKSIKTIVGHTG-PIKSVAWVIKNSSSCLFVSASMDQTLRLWKWNVGENKVKALKVCRGHK  193 (423)
T ss_pred             ceEEEeecCCeeEEEec-CCceEEEEecCCc-ceeeeEEEecCCccceEEEecCCceEEEEEecCchhhhhHHhHhcccc
Confidence            45789999999999996 7999999999999 99988876 33  245777777799999998877644    3334999


Q ss_pred             cceEEEEECCCCCEEEE-ecCCeEEEEEcc-------------------------CCceEEEecccCCCeEEEEEecCCC
Q psy10867         79 GRISSMQASPDAAYIAV-SIETKLHMWQIS-------------------------SGRLLATASSHYQPITIVKWSADSN  132 (343)
Q Consensus        79 ~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~-------------------------~~~~~~~~~~~~~~v~~~~~~~~~~  132 (343)
                      ..|.+++..++|..+++ +.|..|.+|+..                         ++.++.++.+|.++|.++.|++ ..
T Consensus       194 ~~V~sVsv~~sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~d-~~  272 (423)
T KOG0313|consen  194 RSVDSVSVDSSGTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVWSD-AT  272 (423)
T ss_pred             cceeEEEecCCCCeEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecccccceeeEEEcC-CC
Confidence            99999999999998887 789999999932                         1235667889999999999987 77


Q ss_pred             EEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEE
Q psy10867        133 FIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIF  212 (343)
Q Consensus       133 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~w  212 (343)
                      .+++++.|.+|+.||+.++....++.                       -...+.++.++|..  .+|++|+.|..+++|
T Consensus       273 v~yS~SwDHTIk~WDletg~~~~~~~-----------------------~~ksl~~i~~~~~~--~Ll~~gssdr~irl~  327 (423)
T KOG0313|consen  273 VIYSVSWDHTIKVWDLETGGLKSTLT-----------------------TNKSLNCISYSPLS--KLLASGSSDRHIRLW  327 (423)
T ss_pred             ceEeecccceEEEEEeecccceeeee-----------------------cCcceeEeeccccc--ceeeecCCCCceeec
Confidence            89999999999999999986655432                       45678999999988  899999999999999


Q ss_pred             ecCCCce---EEEe-ecCCcEEEEEEcCCCC-EEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEE
Q psy10867        213 DLCTGED---LLSL-ILDTRLTCVAFDGTED-NIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSC  287 (343)
Q Consensus       213 d~~~~~~---~~~~-~~~~~i~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  287 (343)
                      |.+++.-   ..++ .|.+-|.++.|+|... .|++|+.|+++++||++....          ++..+.+|...|.++.|
T Consensus       328 DPR~~~gs~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~----------plydI~~h~DKvl~vdW  397 (423)
T KOG0313|consen  328 DPRTGDGSVVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKA----------PLYDIAGHNDKVLSVDW  397 (423)
T ss_pred             CCCCCCCceeEEeeecchhhhhheecCCCCceEEEEEecCCeEEEEEeccCCC----------cceeeccCCceEEEEec
Confidence            9997642   2233 3788899999999765 567789999999999998542          37788999999999999


Q ss_pred             ccCCCEEEEEeCCCcEEEEec
Q psy10867        288 SITGITLLSSSADETLKIWHT  308 (343)
Q Consensus       288 s~~~~~l~s~~~dg~i~iwd~  308 (343)
                      . ++..+++|+.|.+|+++.-
T Consensus       398 ~-~~~~IvSGGaD~~l~i~~~  417 (423)
T KOG0313|consen  398 N-EGGLIVSGGADNKLRIFKG  417 (423)
T ss_pred             c-CCceEEeccCcceEEEecc
Confidence            6 5678999999999999864

>KOG0316|consensus

Probab=100.00  E-value=1.2e-35  Score=212.08  Aligned_cols=261  Identities=18%  Similarity=0.302  Sum_probs=221.9

Q ss_pred             eEEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEE
Q psy10867          6 EVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQ   85 (343)
Q Consensus         6 ~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~   85 (343)
                      ..+++++.|.+|++|++..|.+++++.+|.. .|..++.+.|+.-++++..|..+.+||+++++..+.+.+|.+.|+.++
T Consensus        30 nY~ltcGsdrtvrLWNp~rg~liktYsghG~-EVlD~~~s~Dnskf~s~GgDk~v~vwDV~TGkv~Rr~rgH~aqVNtV~  108 (307)
T KOG0316|consen   30 NYCLTCGSDRTVRLWNPLRGALIKTYSGHGH-EVLDAALSSDNSKFASCGGDKAVQVWDVNTGKVDRRFRGHLAQVNTVR  108 (307)
T ss_pred             CEEEEcCCCceEEeecccccceeeeecCCCc-eeeeccccccccccccCCCCceEEEEEcccCeeeeecccccceeeEEE
Confidence            3456666799999999999999999999999 999999999988888888889999999999999999999999999999


Q ss_pred             ECCCCCEEEE-ecCCeEEEEEccCC--ceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCC
Q psy10867         86 ASPDAAYIAV-SIETKLHMWQISSG--RLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIP  162 (343)
Q Consensus        86 ~s~~~~~l~~-~~d~~i~v~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~  162 (343)
                      |+.+...+++ +.|..+++||.++.  ++++.+......|.++...  +..|++|+.||+++.||++.+....       
T Consensus       109 fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQildea~D~V~Si~v~--~heIvaGS~DGtvRtydiR~G~l~s-------  179 (307)
T KOG0316|consen  109 FNEESSVVASGSFDSSVRLWDCRSRSFEPIQILDEAKDGVSSIDVA--EHEIVAGSVDGTVRTYDIRKGTLSS-------  179 (307)
T ss_pred             ecCcceEEEeccccceeEEEEcccCCCCccchhhhhcCceeEEEec--ccEEEeeccCCcEEEEEeecceeeh-------
Confidence            9999999987 68999999998765  6788888888999999885  6789999999999999999874322       


Q ss_pred             CCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCC--cEEEEEEcCCCC
Q psy10867        163 GSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDT--RLTCVAFDGTED  239 (343)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~--~i~~~~~~~~~~  239 (343)
                                       ..-..+|++++|++++  +..+.++.|+++++.|-.+|+.+..+. |.+  .-...+++....
T Consensus       180 -----------------Dy~g~pit~vs~s~d~--nc~La~~l~stlrLlDk~tGklL~sYkGhkn~eykldc~l~qsdt  240 (307)
T KOG0316|consen  180 -----------------DYFGHPITSVSFSKDG--NCSLASSLDSTLRLLDKETGKLLKSYKGHKNMEYKLDCCLNQSDT  240 (307)
T ss_pred             -----------------hhcCCcceeEEecCCC--CEEEEeeccceeeecccchhHHHHHhcccccceeeeeeeecccce
Confidence                             2355789999999999  789999999999999999999998887 333  345677888888


Q ss_pred             EEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCc-EEEEEEccCCCEEEEEeCCCcEEEEe
Q psy10867        240 NIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQ-VTSLSCSITGITLLSSSADETLKIWH  307 (343)
Q Consensus       240 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~s~~~~~l~s~~~dg~i~iwd  307 (343)
                      .+++|++||.|++||+.....           +..+..+... +.+++++|.-..++++... .+..|-
T Consensus       241 hV~sgSEDG~Vy~wdLvd~~~-----------~sk~~~~~~v~v~dl~~hp~~~~f~~A~~~-~~~~~~  297 (307)
T KOG0316|consen  241 HVFSGSEDGKVYFWDLVDETQ-----------ISKLSVVSTVIVTDLSCHPTMDDFITATGH-GDLFWY  297 (307)
T ss_pred             eEEeccCCceEEEEEecccee-----------eeeeccCCceeEEeeecccCccceeEecCC-ceecee
Confidence            999999999999999987544           4455556666 8999999987767766543 455554

>KOG0299|consensus

Probab=100.00  E-value=4.2e-35  Score=228.02  Aligned_cols=285  Identities=16%  Similarity=0.191  Sum_probs=235.6

Q ss_pred             EEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccc-----------------eec-ccCCcceEEEEECCC
Q psy10867         28 LMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKA-----------------QLR-LICPGRISSMQASPD   89 (343)
Q Consensus        28 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~-----------------~~~-~~~~~~v~~~~~s~~   89 (343)
                      ...+..|.. ++.+++++|++.+..+++.+++|.-|++.+++..                 +.. ..|...+.+++.++|
T Consensus       135 ~~~~~~H~~-s~~~vals~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~D  213 (479)
T KOG0299|consen  135 FRVIGKHQL-SVTSVALSPDDKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSD  213 (479)
T ss_pred             ceeeccccC-cceEEEeeccccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCC
Confidence            566777887 9999999999999999999999999998877633                 011 267778999999999


Q ss_pred             CCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCc
Q psy10867         90 AAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKG  168 (343)
Q Consensus        90 ~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~  168 (343)
                      |++||+ +.|..|.||+.++.+.++.+.+|.+.|.+++|-...+.+++++.|+.|++|+++...                
T Consensus       214 gkylatgg~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s----------------  277 (479)
T KOG0299|consen  214 GKYLATGGRDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLS----------------  277 (479)
T ss_pred             CcEEEecCCCceEEEecCcccchhhcccccccceeeeeeecCccceeeeecCCceEEEehhHhH----------------
Confidence            999998 578899999999999999999999999999999888899999999999999998864                


Q ss_pred             cccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcCCC
Q psy10867        169 VTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEG  248 (343)
Q Consensus       169 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~  248 (343)
                            .+..+.+|...|..+.....+  ..+-+|+.|+++++|++.....+....+.+.+.|++|-. ...+++|+.+|
T Consensus       278 ------~vetlyGHqd~v~~IdaL~re--R~vtVGgrDrT~rlwKi~eesqlifrg~~~sidcv~~In-~~HfvsGSdnG  348 (479)
T KOG0299|consen  278 ------YVETLYGHQDGVLGIDALSRE--RCVTVGGRDRTVRLWKIPEESQLIFRGGEGSIDCVAFIN-DEHFVSGSDNG  348 (479)
T ss_pred             ------HHHHHhCCccceeeechhccc--ceEEeccccceeEEEeccccceeeeeCCCCCeeeEEEec-ccceeeccCCc
Confidence                  455667999999999988877  566667799999999996655555555777899999975 56789999999


Q ss_pred             cEEEEEeecccccccccccCCCCCC-ccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccc----eeeeecccCCce
Q psy10867        249 VIKSFCLRQVPRTRDHHIQDSTSNP-DFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISR----QCLRTIQHKGPV  323 (343)
Q Consensus       249 ~i~i~d~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~----~~~~~~~~~~~v  323 (343)
                      .|.+|++.............+.... .-..++.+|++++..|...++|+|+.+|.|++|-+..+    +++..+...+.|
T Consensus       349 ~IaLWs~~KKkplf~~~~AHgv~~~~~~~~~~~Witsla~i~~sdL~asGS~~G~vrLW~i~~g~r~i~~l~~ls~~GfV  428 (479)
T KOG0299|consen  349 SIALWSLLKKKPLFTSRLAHGVIPELDPVNGNFWITSLAVIPGSDLLASGSWSGCVRLWKIEDGLRAINLLYSLSLVGFV  428 (479)
T ss_pred             eEEEeeecccCceeEeeccccccCCccccccccceeeeEecccCceEEecCCCCceEEEEecCCccccceeeecccccEE
Confidence            9999999887665544322221111 11223459999999999999999999999999999877    455666678999


Q ss_pred             EEEEEccCCCeeeec
Q psy10867        324 LGAFLGLLPPAIHDY  338 (343)
Q Consensus       324 ~~~~~sp~~~~l~~~  338 (343)
                      ++++|+++|+.|+++
T Consensus       429 Nsl~f~~sgk~ivag  443 (479)
T KOG0299|consen  429 NSLAFSNSGKRIVAG  443 (479)
T ss_pred             EEEEEccCCCEEEEe
Confidence            999999999987776

>KOG0275|consensus

Probab=100.00  E-value=3.8e-36  Score=224.75  Aligned_cols=269  Identities=18%  Similarity=0.190  Sum_probs=232.6

Q ss_pred             cceEEEEeCCceEEEEEcCCCeEEEEeCCCccccee--------cccCCcceEEEEECCCCCEEEE-ecCCeEEEEEccC
Q psy10867         38 SPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQL--------RLICPGRISSMQASPDAAYIAV-SIETKLHMWQISS  108 (343)
Q Consensus        38 ~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~--------~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~  108 (343)
                      .+.|..|+|||.++++|+-||.|.+||..+++..+.        +.-+.++|.|+.|+.|...||+ +.||.|++|.+.+
T Consensus       215 h~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvWri~t  294 (508)
T KOG0275|consen  215 HVECARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKVWRIET  294 (508)
T ss_pred             chhheeeCCCCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEEEEEec
Confidence            678999999999999999999999999999876532        3356789999999999999998 5799999999999


Q ss_pred             CceEEEec-ccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceE
Q psy10867        109 GRLLATAS-SHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVT  187 (343)
Q Consensus       109 ~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  187 (343)
                      |.+++.+. .|...|+|+.|+.|+..+++++.|.++++.-+.+++                      .+..+++|...|+
T Consensus       295 G~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK----------------------~LKEfrGHsSyvn  352 (508)
T KOG0275|consen  295 GQCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGK----------------------CLKEFRGHSSYVN  352 (508)
T ss_pred             chHHHHhhhhhccCeeEEEEccCcchhhcccccceEEEeccccch----------------------hHHHhcCcccccc
Confidence            99999987 899999999999999999999999999999999875                      5566789999999


Q ss_pred             EEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeec---CCcEEEEEEcCC-CCEEEEEcCCCcEEEEEeeccccccc
Q psy10867        188 HVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLIL---DTRLTCVAFDGT-EDNIYMGTSEGVIKSFCLRQVPRTRD  263 (343)
Q Consensus       188 ~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~---~~~i~~~~~~~~-~~~l~~~~~d~~i~i~d~~~~~~~~~  263 (343)
                      ...|.++|  ..+++++.||++++|+..+.+++.+++.   +.+|.++..-|. ...++++...++|+|.++...-. +.
T Consensus       353 ~a~ft~dG--~~iisaSsDgtvkvW~~KtteC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~qGQvV-rs  429 (508)
T KOG0275|consen  353 EATFTDDG--HHIISASSDGTVKVWHGKTTECLSTFKPLGTDYPVNSVILLPKNPEHFIVCNRSNTVYIMNMQGQVV-RS  429 (508)
T ss_pred             ceEEcCCC--CeEEEecCCccEEEecCcchhhhhhccCCCCcccceeEEEcCCCCceEEEEcCCCeEEEEeccceEE-ee
Confidence            99999999  8999999999999999999999998873   456888887775 46888898999999998865211 11


Q ss_pred             ccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc-cCCceEEEEEccCCCeeeecc
Q psy10867        264 HHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVLGAFLGLLPPAIHDYD  339 (343)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~  339 (343)
                      +        ..-+...+...+.+.||.|.++.+.++|+.++.+.+.+|+..+++. |...+..++-+|..+.|++.+
T Consensus       430 f--------sSGkREgGdFi~~~lSpkGewiYcigED~vlYCF~~~sG~LE~tl~VhEkdvIGl~HHPHqNllAsYs  498 (508)
T KOG0275|consen  430 F--------SSGKREGGDFINAILSPKGEWIYCIGEDGVLYCFSVLSGKLERTLPVHEKDVIGLTHHPHQNLLASYS  498 (508)
T ss_pred             e--------ccCCccCCceEEEEecCCCcEEEEEccCcEEEEEEeecCceeeeeecccccccccccCcccchhhhhc
Confidence            0        0111123456677899999999999999999999999999999998 999999999999999998875

>KOG0277|consensus

Probab=100.00  E-value=3.5e-35  Score=211.87  Aligned_cols=269  Identities=18%  Similarity=0.266  Sum_probs=214.7

Q ss_pred             ceEEEEeC--CceEEEEEc------CCCeEEEEeCCCcccceec--ccCCcceEEEEECCCC--CEEEEecCCeEEEEEc
Q psy10867         39 PHSMCLLG--NDYVLGVEK------GKPMIQAWPVNSQEKAQLR--LICPGRISSMQASPDA--AYIAVSIETKLHMWQI  106 (343)
Q Consensus        39 v~~~~~~~--~~~~~~~~~------~~~~i~iw~~~~~~~~~~~--~~~~~~v~~~~~s~~~--~~l~~~~d~~i~v~~~  106 (343)
                      =.++.|||  +++++++..      ..|.+.|.++...+-+...  ..-.+.+..++|+++.  ..++++.||.+++||+
T Consensus        11 GysvqfSPf~~nrLavAt~q~yGl~G~G~L~ile~~~~~gi~e~~s~d~~D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~   90 (311)
T KOG0277|consen   11 GYSVQFSPFVENRLAVATAQHYGLAGNGRLFILEVTDPKGIQECQSYDTEDGLFDVAWSENHENQVIAASGDGSLRLFDL   90 (311)
T ss_pred             cceeEecccccchhheeehhhcccccCceEEEEecCCCCCeEEEEeeecccceeEeeecCCCcceEEEEecCceEEEecc
Confidence            36889998  445444322      3489999998754444322  2456789999999854  4555688999999996


Q ss_pred             cC-CceEEEecccCCCeEEEEEec-CCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeeccccc
Q psy10867        107 SS-GRLLATASSHYQPITIVKWSA-DSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSL  184 (343)
Q Consensus       107 ~~-~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (343)
                      .. ..++..++.|..+|.++.|++ +.+.+++++.|++|++|+...+.                      .++.+.+|..
T Consensus        91 ~~~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~----------------------Sv~Tf~gh~~  148 (311)
T KOG0277|consen   91 TMPSKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPN----------------------SVQTFNGHNS  148 (311)
T ss_pred             CCCCcchhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCCCc----------------------ceEeecCCcc
Confidence            43 367889999999999999998 56678888999999999998764                      5566789999


Q ss_pred             ceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcC-CCCEEEEEcCCCcEEEEEeecccccc
Q psy10867        185 PVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDG-TEDNIYMGTSEGVIKSFCLRQVPRTR  262 (343)
Q Consensus       185 ~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~  262 (343)
                      .|....|+|..+ +++++++.|+++++||++.......+. |...+.++.|+. +.+.|++|+.|+.|+.||+++...  
T Consensus       149 ~Iy~a~~sp~~~-nlfas~Sgd~~l~lwdvr~~gk~~~i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r~--  225 (311)
T KOG0277|consen  149 CIYQAAFSPHIP-NLFASASGDGTLRLWDVRSPGKFMSIEAHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLRT--  225 (311)
T ss_pred             EEEEEecCCCCC-CeEEEccCCceEEEEEecCCCceeEEEeccceeEeecccccCCcEEEecCCCceEEEEehhhccc--
Confidence            999999999876 899999999999999998654444455 777999999998 456788999999999999998653  


Q ss_pred             cccccCCCCCCccccccCcEEEEEEccCC-CEEEEEeCCCcEEEEecccc-eeeeecc-cCCceEEEEEccC-CCeeeec
Q psy10867        263 DHHIQDSTSNPDFIGHEKQVTSLSCSITG-ITLLSSSADETLKIWHTISR-QCLRTIQ-HKGPVLGAFLGLL-PPAIHDY  338 (343)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~s~~~dg~i~iwd~~~~-~~~~~~~-~~~~v~~~~~sp~-~~~l~~~  338 (343)
                              ++..+.+|.-.|..++|||.. ..||+++.|-+++|||...+ ..+.+.+ |..-+..+.||+- +.++++.
T Consensus       226 --------pl~eL~gh~~AVRkvk~Sph~~~lLaSasYDmT~riw~~~~~ds~~e~~~~HtEFv~g~Dws~~~~~~vAs~  297 (311)
T KOG0277|consen  226 --------PLFELNGHGLAVRKVKFSPHHASLLASASYDMTVRIWDPERQDSAIETVDHHTEFVCGLDWSLFDPGQVAST  297 (311)
T ss_pred             --------cceeecCCceEEEEEecCcchhhHhhhccccceEEecccccchhhhhhhhccceEEeccccccccCceeeec
Confidence                    377789999999999999965 58999999999999999854 4555666 8888999999975 4455555


Q ss_pred             cc
Q psy10867        339 DF  340 (343)
Q Consensus       339 ~~  340 (343)
                      +.
T Consensus       298 gW  299 (311)
T KOG0277|consen  298 GW  299 (311)
T ss_pred             cc
Confidence            43

>KOG0275|consensus

Probab=100.00  E-value=4.1e-36  Score=224.55  Aligned_cols=271  Identities=20%  Similarity=0.266  Sum_probs=233.5

Q ss_pred             ccceEEEecCCCCeEEEEecCCceEEEEEe--------cCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceec
Q psy10867          3 LLNEVAFSYDGSGAISVWEPKGGTLLMSYK--------GASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLR   74 (343)
Q Consensus         3 ~v~~~~~s~~~dg~i~iwd~~~~~~~~~~~--------~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~   74 (343)
                      |-.+.+++++-||-|.+||..+|+..+.++        -+.. +|.|+.|+.|...+|+|+.||.|++|.+.++.+++.+
T Consensus       223 PDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~-aVlci~FSRDsEMlAsGsqDGkIKvWri~tG~ClRrF  301 (508)
T KOG0275|consen  223 PDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDD-AVLCISFSRDSEMLASGSQDGKIKVWRIETGQCLRRF  301 (508)
T ss_pred             CCCceEeeccccceeeeehhccchhhhhhhhhhhcceeeccc-ceEEEeecccHHHhhccCcCCcEEEEEEecchHHHHh
Confidence            334445555559999999999988765433        3566 9999999999999999999999999999999999766


Q ss_pred             c-cCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccc
Q psy10867         75 L-ICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLI  152 (343)
Q Consensus        75 ~-~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~  152 (343)
                      . .|...|+++.|+.|+..+.+ +.|.++++--+.+|+++..+++|.+.|+...|.++|+.+++++.||+|++|+..+.+
T Consensus       302 drAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~LKEfrGHsSyvn~a~ft~dG~~iisaSsDgtvkvW~~Ktte  381 (508)
T KOG0275|consen  302 DRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGKCLKEFRGHSSYVNEATFTDDGHHIISASSDGTVKVWHGKTTE  381 (508)
T ss_pred             hhhhccCeeEEEEccCcchhhcccccceEEEeccccchhHHHhcCccccccceEEcCCCCeEEEecCCccEEEecCcchh
Confidence            6 89999999999999876665 889999999999999999999999999999999999999999999999999999988


Q ss_pred             eeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee----cCCc
Q psy10867        153 CKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI----LDTR  228 (343)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~----~~~~  228 (343)
                      +..++.                +    .+...+|+.+-..|..+ ..++.+...+++.+-++ .|+.++.+.    ..+.
T Consensus       382 C~~Tfk----------------~----~~~d~~vnsv~~~PKnp-eh~iVCNrsntv~imn~-qGQvVrsfsSGkREgGd  439 (508)
T KOG0275|consen  382 CLSTFK----------------P----LGTDYPVNSVILLPKNP-EHFIVCNRSNTVYIMNM-QGQVVRSFSSGKREGGD  439 (508)
T ss_pred             hhhhcc----------------C----CCCcccceeEEEcCCCC-ceEEEEcCCCeEEEEec-cceEEeeeccCCccCCc
Confidence            877654                1    13556788888888876 67778888899999997 577888776    3456


Q ss_pred             EEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEe
Q psy10867        229 LTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWH  307 (343)
Q Consensus       229 i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd  307 (343)
                      ..+.+.+|.|.++++.+.|+.++.|...++..           ...+..|...+..++-+|..+.||+-++||.+++|.
T Consensus       440 Fi~~~lSpkGewiYcigED~vlYCF~~~sG~L-----------E~tl~VhEkdvIGl~HHPHqNllAsYsEDgllKLWk  507 (508)
T KOG0275|consen  440 FINAILSPKGEWIYCIGEDGVLYCFSVLSGKL-----------ERTLPVHEKDVIGLTHHPHQNLLASYSEDGLLKLWK  507 (508)
T ss_pred             eEEEEecCCCcEEEEEccCcEEEEEEeecCce-----------eeeeecccccccccccCcccchhhhhcccchhhhcC
Confidence            88889999999999999999999999987654           345677899999999999999999999999999995

>KOG0274|consensus

Probab=100.00  E-value=1.8e-34  Score=242.53  Aligned_cols=267  Identities=20%  Similarity=0.282  Sum_probs=231.3

Q ss_pred             eEEEecCCCCeEEEEecCCceEEEE-EecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEE
Q psy10867          6 EVAFSYDGSGAISVWEPKGGTLLMS-YKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSM   84 (343)
Q Consensus         6 ~~~~s~~~dg~i~iwd~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~   84 (343)
                      ..+++++.+.+|++||..++..+.. +.+|.+ .|.++++...+.++++|+.|.++++||..++++...+.+|.+.|.++
T Consensus       219 ~~~~~~s~~~tl~~~~~~~~~~i~~~l~GH~g-~V~~l~~~~~~~~lvsgS~D~t~rvWd~~sg~C~~~l~gh~stv~~~  297 (537)
T KOG0274|consen  219 GFFKSGSDDSTLHLWDLNNGYLILTRLVGHFG-GVWGLAFPSGGDKLVSGSTDKTERVWDCSTGECTHSLQGHTSSVRCL  297 (537)
T ss_pred             CeEEecCCCceeEEeecccceEEEeeccCCCC-CceeEEEecCCCEEEEEecCCcEEeEecCCCcEEEEecCCCceEEEE
Confidence            3566788899999999999999888 999999 99999998877888888888999999999999999999999999999


Q ss_pred             EECCCCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCC
Q psy10867         85 QASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPG  163 (343)
Q Consensus        85 ~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~  163 (343)
                      ...  ..++++ +.|.+|++|+++++..+..+.+|.++|.++..+  +.++++|+.|+.|++||+.+++           
T Consensus       298 ~~~--~~~~~sgs~D~tVkVW~v~n~~~l~l~~~h~~~V~~v~~~--~~~lvsgs~d~~v~VW~~~~~~-----------  362 (537)
T KOG0274|consen  298 TID--PFLLVSGSRDNTVKVWDVTNGACLNLLRGHTGPVNCVQLD--EPLLVSGSYDGTVKVWDPRTGK-----------  362 (537)
T ss_pred             Ecc--CceEeeccCCceEEEEeccCcceEEEeccccccEEEEEec--CCEEEEEecCceEEEEEhhhce-----------
Confidence            764  344554 689999999999999999999999999999996  8899999999999999999764           


Q ss_pred             CCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCC-ceEEEeecCCc-EEEEEEcCCCCEE
Q psy10867        164 SSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTG-EDLLSLILDTR-LTCVAFDGTEDNI  241 (343)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~-~~~~~~~~~~~-i~~~~~~~~~~~l  241 (343)
                                 .+..+.+|...|+++.+.+.   ..+++|+.|++|++||++++ +++..+.++.. +..+  ...++.|
T Consensus       363 -----------cl~sl~gH~~~V~sl~~~~~---~~~~Sgs~D~~IkvWdl~~~~~c~~tl~~h~~~v~~l--~~~~~~L  426 (537)
T KOG0274|consen  363 -----------CLKSLSGHTGRVYSLIVDSE---NRLLSGSLDTTIKVWDLRTKRKCIHTLQGHTSLVSSL--LLRDNFL  426 (537)
T ss_pred             -----------eeeeecCCcceEEEEEecCc---ceEEeeeeccceEeecCCchhhhhhhhcCCccccccc--cccccee
Confidence                       66777899999999988775   37999999999999999999 88888885444 4333  4457899


Q ss_pred             EEEcCCCcEEEEEeecccccccccccCCCCCCcccc-ccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeec
Q psy10867        242 YMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIG-HEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTI  317 (343)
Q Consensus       242 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~  317 (343)
                      ++++.|+.|++||....+.           +..+.+ |...|+.+++.  ...+++++.||.+++||++++++.+.+
T Consensus       427 vs~~aD~~Ik~WD~~~~~~-----------~~~~~~~~~~~v~~l~~~--~~~il~s~~~~~~~l~dl~~~~~~~~l  490 (537)
T KOG0274|consen  427 VSSSADGTIKLWDAEEGEC-----------LRTLEGRHVGGVSALALG--KEEILCSSDDGSVKLWDLRSGTLIRTL  490 (537)
T ss_pred             EeccccccEEEeecccCce-----------eeeeccCCcccEEEeecC--cceEEEEecCCeeEEEecccCchhhhh
Confidence            9999999999999988665           444555 66888888876  457899999999999999999988866

>KOG1539|consensus

Probab=100.00  E-value=1.5e-33  Score=234.31  Aligned_cols=330  Identities=15%  Similarity=0.213  Sum_probs=262.5

Q ss_pred             EecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECC
Q psy10867          9 FSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASP   88 (343)
Q Consensus         9 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~   88 (343)
                      +-++.+|.+.+||+++++.+.+++++.. .|+++.-+|-=.+++.|..+|+|.++|+..++.+..+....++|+.++|..
T Consensus       176 vvGs~~G~lql~Nvrt~K~v~~f~~~~s-~IT~ieqsPaLDVVaiG~~~G~ViifNlK~dkil~sFk~d~g~VtslSFrt  254 (910)
T KOG1539|consen  176 VVGSSQGRLQLWNVRTGKVVYTFQEFFS-RITAIEQSPALDVVAIGLENGTVIIFNLKFDKILMSFKQDWGRVTSLSFRT  254 (910)
T ss_pred             EEeecCCcEEEEEeccCcEEEEeccccc-ceeEeccCCcceEEEEeccCceEEEEEcccCcEEEEEEccccceeEEEecc
Confidence            4456689999999999999999999998 999999999989999999999999999999998877755569999999999


Q ss_pred             CCCEEE-Ee-cCCeEEEEEccCCceEEEec-ccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccce------------
Q psy10867         89 DAAYIA-VS-IETKLHMWQISSGRLLATAS-SHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLIC------------  153 (343)
Q Consensus        89 ~~~~l~-~~-~d~~i~v~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~------------  153 (343)
                      ||+.+. ++ ..|.+.+||++..+.+..+. .|.+.|....|.|....+++.+.|+.+++|=.+++.-            
T Consensus       255 DG~p~las~~~~G~m~~wDLe~kkl~~v~~nah~~sv~~~~fl~~epVl~ta~~DnSlk~~vfD~~dg~pR~LR~R~GHs  334 (910)
T KOG1539|consen  255 DGNPLLASGRSNGDMAFWDLEKKKLINVTRNAHYGSVTGATFLPGEPVLVTAGADNSLKVWVFDSGDGVPRLLRSRGGHS  334 (910)
T ss_pred             CCCeeEEeccCCceEEEEEcCCCeeeeeeeccccCCcccceecCCCceEeeccCCCceeEEEeeCCCCcchheeeccCCC
Confidence            997555 44 56899999999888776665 7889999999999999999999999988885553211            


Q ss_pred             -----eeeee-------c---------------------CC-----C----CCC---------------CCcccccc---
Q psy10867        154 -----KQTVA-------F---------------------GI-----P----GSS---------------GKGVTGLT---  173 (343)
Q Consensus       154 -----~~~~~-------~---------------------~~-----~----~~~---------------~~~~~~~~---  173 (343)
                           +.-+.       .                     +.     .    +..               .......+   
T Consensus       335 ~Pp~~irfy~~~g~~ilsa~~Drt~r~fs~~~e~~~~~l~~~~~~~~~kk~~~~~~~~~k~p~i~~fa~~~~RE~~W~Nv  414 (910)
T KOG1539|consen  335 APPSCIRFYGSQGHFILSAKQDRTLRSFSVISESQSQELGQLHNKKRAKKVNVFSTEKLKLPPIVEFAFENAREKEWDNV  414 (910)
T ss_pred             CCchheeeeccCcEEEEecccCcchhhhhhhHHHHhHhhcccccccccccccccchhhhcCCcceeeecccchhhhhcce
Confidence                 00000       0                     00     0    000               00000000   


Q ss_pred             ------------------ce-eeee-----cccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEe----ec
Q psy10867        174 ------------------EP-LHVK-----SQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSL----IL  225 (343)
Q Consensus       174 ------------------~~-~~~~-----~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~----~~  225 (343)
                                        .. ...+     ......+++++.++-|  ++.+.|+..|.|-+|++++|-....+    .|
T Consensus       415 ~~~h~~~~~~~tW~~~n~~~G~~~L~~~~~~~~~~~~~av~vs~CG--NF~~IG~S~G~Id~fNmQSGi~r~sf~~~~ah  492 (910)
T KOG1539|consen  415 ITAHKGKRSAYTWNFRNKTSGRHVLDPKRFKKDDINATAVCVSFCG--NFVFIGYSKGTIDRFNMQSGIHRKSFGDSPAH  492 (910)
T ss_pred             eEEecCcceEEEEeccCcccccEEecCccccccCcceEEEEEeccC--ceEEEeccCCeEEEEEcccCeeecccccCccc
Confidence                              00 0000     0122567888999988  89999999999999999999988888    48


Q ss_pred             CCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccc------------------------------cCCCCCCcc
Q psy10867        226 DTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHI------------------------------QDSTSNPDF  275 (343)
Q Consensus       226 ~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~------------------------------~~~~~~~~~  275 (343)
                      ..+|+.++...-++.+++++.+|.+++||..+.........                              ...+.+..+
T Consensus       493 ~~~V~gla~D~~n~~~vsa~~~Gilkfw~f~~k~l~~~l~l~~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~kvvR~f  572 (910)
T KOG1539|consen  493 KGEVTGLAVDGTNRLLVSAGADGILKFWDFKKKVLKKSLRLGSSITGIVYHRVSDLLAIALDDFSIRVVDVVTRKVVREF  572 (910)
T ss_pred             cCceeEEEecCCCceEEEccCcceEEEEecCCcceeeeeccCCCcceeeeeehhhhhhhhcCceeEEEEEchhhhhhHHh
Confidence            89999999999999999999999999999987652222111                              122335567


Q ss_pred             ccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecccCCceEEEEEccCCCeeeecccC
Q psy10867        276 IGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQHKGPVLGAFLGLLPPAIHDYDFT  341 (343)
Q Consensus       276 ~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~  341 (343)
                      .+|.+.|++++|||||++|++++.|++|++||+.++.++..+....+++++.|||+|.+|+++...
T Consensus       573 ~gh~nritd~~FS~DgrWlisasmD~tIr~wDlpt~~lID~~~vd~~~~sls~SPngD~LAT~Hvd  638 (910)
T KOG1539|consen  573 WGHGNRITDMTFSPDGRWLISASMDSTIRTWDLPTGTLIDGLLVDSPCTSLSFSPNGDFLATVHVD  638 (910)
T ss_pred             hccccceeeeEeCCCCcEEEEeecCCcEEEEeccCcceeeeEecCCcceeeEECCCCCEEEEEEec
Confidence            899999999999999999999999999999999999999999989999999999999999997643

>KOG0310|consensus

Probab=100.00  E-value=1.1e-34  Score=227.19  Aligned_cols=271  Identities=18%  Similarity=0.256  Sum_probs=226.6

Q ss_pred             cccceEEEecCC--------CCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCccccee
Q psy10867          2 SLLNEVAFSYDG--------SGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQL   73 (343)
Q Consensus         2 ~~v~~~~~s~~~--------dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~   73 (343)
                      ++|.++.|+|..        .-.+.||+..+....+++..... .+.+++|-.||+++++|+..|.|++||..+...++.
T Consensus        27 ~~vssl~fsp~~P~d~aVt~S~rvqly~~~~~~~~k~~srFk~-~v~s~~fR~DG~LlaaGD~sG~V~vfD~k~r~iLR~  105 (487)
T KOG0310|consen   27 NSVSSLCFSPKHPYDFAVTSSVRVQLYSSVTRSVRKTFSRFKD-VVYSVDFRSDGRLLAAGDESGHVKVFDMKSRVILRQ  105 (487)
T ss_pred             CcceeEecCCCCCCceEEecccEEEEEecchhhhhhhHHhhcc-ceeEEEeecCCeEEEccCCcCcEEEeccccHHHHHH
Confidence            467888998844        46789999988888887877777 999999999999999999999999999777666788


Q ss_pred             cccCCcceEEEEECCCCCEEE-E-ecCCeEEEEEccCCceEEEecccCCCeEEEEEec-CCCEEEEecCCCeEEEeecCc
Q psy10867         74 RLICPGRISSMQASPDAAYIA-V-SIETKLHMWQISSGRLLATASSHYQPITIVKWSA-DSNFIVTGGEDGTICVWQLSR  150 (343)
Q Consensus        74 ~~~~~~~v~~~~~s~~~~~l~-~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~  150 (343)
                      +..|..++....|+|++..++ + +.|+.+++||+.+......+.+|++.|.|.+|+| ++..+++|+.||.|++||++.
T Consensus       106 ~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~  185 (487)
T KOG0310|consen  106 LYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRS  185 (487)
T ss_pred             HhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcEEEEEecCCcceeEeeccccCCCeEEEecCCCceEEEEEecc
Confidence            889999999999999765444 4 4567999999998887668999999999999999 566999999999999999998


Q ss_pred             cceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceE-EEee-cCCc
Q psy10867        151 LICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDL-LSLI-LDTR  228 (343)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~-~~~~-~~~~  228 (343)
                      ..                      .....-.|..+|..+.+.|.|  .++++++. ..+++||+-+|..+ .... |...
T Consensus       186 ~~----------------------~~v~elnhg~pVe~vl~lpsg--s~iasAgG-n~vkVWDl~~G~qll~~~~~H~Kt  240 (487)
T KOG0310|consen  186 LT----------------------SRVVELNHGCPVESVLALPSG--SLIASAGG-NSVKVWDLTTGGQLLTSMFNHNKT  240 (487)
T ss_pred             CC----------------------ceeEEecCCCceeeEEEcCCC--CEEEEcCC-CeEEEEEecCCceehhhhhcccce
Confidence            63                      112223599999999999998  68887764 57999999866543 3333 8899


Q ss_pred             EEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEec
Q psy10867        229 LTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHT  308 (343)
Q Consensus       229 i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~  308 (343)
                      |+|+++..++..|++|+-|+.|++||+.+.+....           + .-.++|.+++.+|+++.++.|..||.+.+-+.
T Consensus       241 VTcL~l~s~~~rLlS~sLD~~VKVfd~t~~Kvv~s-----------~-~~~~pvLsiavs~dd~t~viGmsnGlv~~rr~  308 (487)
T KOG0310|consen  241 VTCLRLASDSTRLLSGSLDRHVKVFDTTNYKVVHS-----------W-KYPGPVLSIAVSPDDQTVVIGMSNGLVSIRRR  308 (487)
T ss_pred             EEEEEeecCCceEeecccccceEEEEccceEEEEe-----------e-ecccceeeEEecCCCceEEEecccceeeeehh
Confidence            99999999999999999999999999877554332           2 24678999999999999999999999888754


Q ss_pred             cc
Q psy10867        309 IS  310 (343)
Q Consensus       309 ~~  310 (343)
                      ..
T Consensus       309 ~~  310 (487)
T KOG0310|consen  309 EV  310 (487)
T ss_pred             hc
Confidence            43

>PTZ00421 coronin; Provisional

Probab=100.00  E-value=1.5e-33  Score=236.66  Aligned_cols=225  Identities=16%  Similarity=0.184  Sum_probs=181.9

Q ss_pred             ecccCCcceEEEEECC-CCCEEEE-ecCCeEEEEEccCC-------ceEEEecccCCCeEEEEEecCC-CEEEEecCCCe
Q psy10867         73 LRLICPGRISSMQASP-DAAYIAV-SIETKLHMWQISSG-------RLLATASSHYQPITIVKWSADS-NFIVTGGEDGT  142 (343)
Q Consensus        73 ~~~~~~~~v~~~~~s~-~~~~l~~-~~d~~i~v~~~~~~-------~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~dg~  142 (343)
                      .+.+|.+.|.+++|+| ++++|++ +.|++|++||+.++       +.+..+.+|...|.+++|+|++ ++|++++.|+.
T Consensus        70 ~l~GH~~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~Dgt  149 (493)
T PTZ00421         70 ILLGQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMV  149 (493)
T ss_pred             eEeCCCCCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCE
Confidence            3568999999999999 7888886 78999999999765       3467788999999999999975 69999999999


Q ss_pred             EEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEE
Q psy10867        143 ICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLS  222 (343)
Q Consensus       143 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~  222 (343)
                      |++||++++.                      ....+..|...|.+++|+|++  .+|++++.|+.|++||+++++.+..
T Consensus       150 VrIWDl~tg~----------------------~~~~l~~h~~~V~sla~spdG--~lLatgs~Dg~IrIwD~rsg~~v~t  205 (493)
T PTZ00421        150 VNVWDVERGK----------------------AVEVIKCHSDQITSLEWNLDG--SLLCTTSKDKKLNIIDPRDGTIVSS  205 (493)
T ss_pred             EEEEECCCCe----------------------EEEEEcCCCCceEEEEEECCC--CEEEEecCCCEEEEEECCCCcEEEE
Confidence            9999998864                      445566899999999999999  8999999999999999999998877


Q ss_pred             ee-cCC-cEEEEEEcCCCCEEEEEc----CCCcEEEEEeecccccccccccCCCCCCccc-cccCcEEEEEEccCCCEEE
Q psy10867        223 LI-LDT-RLTCVAFDGTEDNIYMGT----SEGVIKSFCLRQVPRTRDHHIQDSTSNPDFI-GHEKQVTSLSCSITGITLL  295 (343)
Q Consensus       223 ~~-~~~-~i~~~~~~~~~~~l~~~~----~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~  295 (343)
                      +. |.. ....+.|.+++..+++++    .|+.|++||++......          .... .+...+....|++++++|+
T Consensus       206 l~~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~~p~----------~~~~~d~~~~~~~~~~d~d~~~L~  275 (493)
T PTZ00421        206 VEAHASAKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRKMASPY----------STVDLDQSSALFIPFFDEDTNLLY  275 (493)
T ss_pred             EecCCCCcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCCCCCce----------eEeccCCCCceEEEEEcCCCCEEE
Confidence            76 433 345778999888877654    47899999998654321          1111 1234566678999999999


Q ss_pred             EEe-CCCcEEEEecccceeeeecc--cCCceEEEEEccC
Q psy10867        296 SSS-ADETLKIWHTISRQCLRTIQ--HKGPVLGAFLGLL  331 (343)
Q Consensus       296 s~~-~dg~i~iwd~~~~~~~~~~~--~~~~v~~~~~sp~  331 (343)
                      +++ .|+.|++||+.+++.+....  ...++..++|.|.
T Consensus       276 lggkgDg~Iriwdl~~~~~~~~~~~~s~~~~~g~~~~pk  314 (493)
T PTZ00421        276 IGSKGEGNIRCFELMNERLTFCSSYSSVEPHKGLCMMPK  314 (493)
T ss_pred             EEEeCCCeEEEEEeeCCceEEEeeccCCCCCcceEeccc
Confidence            887 59999999999998777655  5567778888774

>KOG0283|consensus

Probab=100.00  E-value=1.3e-34  Score=241.24  Aligned_cols=245  Identities=18%  Similarity=0.238  Sum_probs=201.0

Q ss_pred             EEEEe-cCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCC--------------------------------c------
Q psy10867         28 LMSYK-GASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNS--------------------------------Q------   68 (343)
Q Consensus        28 ~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~--------------------------------~------   68 (343)
                      .+.+. .|.+ +|.++.|++||+|||+|+.|+.|+||.+..                                .      
T Consensus       259 ~Qe~~~ah~g-aIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s  337 (712)
T KOG0283|consen  259 VQEISNAHKG-AIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTS  337 (712)
T ss_pred             eeccccccCC-cEEEEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCcccccccccccccc
Confidence            44566 7888 999999999999999999999999998755                                0      


Q ss_pred             ----------------------ccceecccCCcceEEEEECCCCCEEEEecCCeEEEEEccCCceEEEecccCCCeEEEE
Q psy10867         69 ----------------------EKAQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPITIVK  126 (343)
Q Consensus        69 ----------------------~~~~~~~~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~  126 (343)
                                            +++..+.+|.+.|..+.||.++-+|.++.|.+|++|++...+++..|. |.+.|+|++
T Consensus       338 ~~~~~~~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn~fLLSSSMDKTVRLWh~~~~~CL~~F~-HndfVTcVa  416 (712)
T KOG0283|consen  338 SSRKGSQSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKNNFLLSSSMDKTVRLWHPGRKECLKVFS-HNDFVTCVA  416 (712)
T ss_pred             ccccccCCccccCCCccccccccchhhhhccchhheecccccCCeeEeccccccEEeecCCCcceeeEEe-cCCeeEEEE
Confidence                                  011225588899999999988877778999999999999999999885 999999999


Q ss_pred             Eec-CCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeC
Q psy10867        127 WSA-DSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSH  205 (343)
Q Consensus       127 ~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~  205 (343)
                      |+| |.++|++|+-||.|+||++...+                       +.....-..-|++++|.|+|  +..+.|+.
T Consensus       417 FnPvDDryFiSGSLD~KvRiWsI~d~~-----------------------Vv~W~Dl~~lITAvcy~PdG--k~avIGt~  471 (712)
T KOG0283|consen  417 FNPVDDRYFISGSLDGKVRLWSISDKK-----------------------VVDWNDLRDLITAVCYSPDG--KGAVIGTF  471 (712)
T ss_pred             ecccCCCcEeecccccceEEeecCcCe-----------------------eEeehhhhhhheeEEeccCC--ceEEEEEe
Confidence            999 88999999999999999998863                       33333445789999999999  89999999


Q ss_pred             CCeEEEEecCCCceEEEee---c------CCcEEEEEEcCCC-CEEEEEcCCCcEEEEEeecccccccccccCCCCCCcc
Q psy10867        206 DRTCKIFDLCTGEDLLSLI---L------DTRLTCVAFDGTE-DNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDF  275 (343)
Q Consensus       206 d~~i~~wd~~~~~~~~~~~---~------~~~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~  275 (343)
                      +|.+++|+....+......   +      ...|+.+.|.|.. ..+++.+.|..|+|||.+....           +..+
T Consensus       472 ~G~C~fY~t~~lk~~~~~~I~~~~~Kk~~~~rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~~~l-----------v~Kf  540 (712)
T KOG0283|consen  472 NGYCRFYDTEGLKLVSDFHIRLHNKKKKQGKRITGLQFFPGDPDEVLVTSNDSRIRIYDGRDKDL-----------VHKF  540 (712)
T ss_pred             ccEEEEEEccCCeEEEeeeEeeccCccccCceeeeeEecCCCCCeEEEecCCCceEEEeccchhh-----------hhhh
Confidence            9999999998777655543   1      2369999999854 4688889999999999976444           3344


Q ss_pred             ccccC--cEEEEEEccCCCEEEEEeCCCcEEEEeccc
Q psy10867        276 IGHEK--QVTSLSCSITGITLLSSSADETLKIWHTIS  310 (343)
Q Consensus       276 ~~~~~--~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~  310 (343)
                      +|+..  .-....|+.||++|+++++|..|++|++..
T Consensus       541 KG~~n~~SQ~~Asfs~Dgk~IVs~seDs~VYiW~~~~  577 (712)
T KOG0283|consen  541 KGFRNTSSQISASFSSDGKHIVSASEDSWVYIWKNDS  577 (712)
T ss_pred             cccccCCcceeeeEccCCCEEEEeecCceEEEEeCCC
Confidence            44332  234567999999999999999999999743

>KOG0647|consensus

Probab=100.00  E-value=4.4e-34  Score=211.10  Aligned_cols=267  Identities=18%  Similarity=0.264  Sum_probs=216.4

Q ss_pred             CCCCcceEEEEeC-CceEEEEEcCCCeEEEEeCCCc-ccc-eecccCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCC
Q psy10867         34 ASVLSPHSMCLLG-NDYVLGVEKGKPMIQAWPVNSQ-EKA-QLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQISSG  109 (343)
Q Consensus        34 ~~~~~v~~~~~~~-~~~~~~~~~~~~~i~iw~~~~~-~~~-~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~  109 (343)
                      .++ .|.+++||| ...++++++-||+||+|+++.. ... +....|.++|.+++|+.||..+++ +.|+.+++||+.++
T Consensus        26 P~D-sIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~S~  104 (347)
T KOG0647|consen   26 PED-SISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLASG  104 (347)
T ss_pred             ccc-chheeEeccccCceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeeccCCceEEEEccCC
Confidence            345 899999999 5677778888899999999873 433 555689999999999999987776 78999999999999


Q ss_pred             ceEEEecccCCCeEEEEEecCCC--EEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceE
Q psy10867        110 RLLATASSHYQPITIVKWSADSN--FIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVT  187 (343)
Q Consensus       110 ~~~~~~~~~~~~v~~~~~~~~~~--~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  187 (343)
                      + +..+..|.++|.++.|-+...  .|++|+.|.+|+.||.+......++.                       -.+.++
T Consensus       105 Q-~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~-----------------------LPeRvY  160 (347)
T KOG0647|consen  105 Q-VSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQ-----------------------LPERVY  160 (347)
T ss_pred             C-eeeeeecccceeEEEEecCCCcceeEecccccceeecccCCCCeeeeee-----------------------ccceee
Confidence            5 566778999999999987555  89999999999999999876554443                       345566


Q ss_pred             EEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEe---ecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccc
Q psy10867        188 HVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSL---ILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDH  264 (343)
Q Consensus       188 ~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~---~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~  264 (343)
                      ++..-.    .+++.+..++.|.+|+++.+......   ...-.+++++..++....+.|+-+|++.+..+.......  
T Consensus       161 a~Dv~~----pm~vVata~r~i~vynL~n~~te~k~~~SpLk~Q~R~va~f~d~~~~alGsiEGrv~iq~id~~~~~~--  234 (347)
T KOG0647|consen  161 AADVLY----PMAVVATAERHIAVYNLENPPTEFKRIESPLKWQTRCVACFQDKDGFALGSIEGRVAIQYIDDPNPKD--  234 (347)
T ss_pred             ehhccC----ceeEEEecCCcEEEEEcCCCcchhhhhcCcccceeeEEEEEecCCceEeeeecceEEEEecCCCCccC--
Confidence            665544    57888999999999999876443222   145568999999999988999999999999988753322  


Q ss_pred             cccCCCCCCcccccc---------CcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc-cCCceEEEEEccCCCe
Q psy10867        265 HIQDSTSNPDFIGHE---------KQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVLGAFLGLLPPA  334 (343)
Q Consensus       265 ~~~~~~~~~~~~~~~---------~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~  334 (343)
                             -..++.|.         ..|++++|+|....|++++.||++.+||-.....+.+.+ +..+|++..|+.+|.+
T Consensus       235 -------nFtFkCHR~~~~~~~~VYaVNsi~FhP~hgtlvTaGsDGtf~FWDkdar~kLk~s~~~~qpItcc~fn~~G~i  307 (347)
T KOG0647|consen  235 -------NFTFKCHRSTNSVNDDVYAVNSIAFHPVHGTLVTAGSDGTFSFWDKDARTKLKTSETHPQPITCCSFNRNGSI  307 (347)
T ss_pred             -------ceeEEEeccCCCCCCceEEecceEeecccceEEEecCCceEEEecchhhhhhhccCcCCCccceeEecCCCCE
Confidence                   23444454         358889999999999999999999999988888888877 9999999999999999


Q ss_pred             eeec
Q psy10867        335 IHDY  338 (343)
Q Consensus       335 l~~~  338 (343)
                      ++-+
T Consensus       308 faYA  311 (347)
T KOG0647|consen  308 FAYA  311 (347)
T ss_pred             EEEE
Confidence            8743

>KOG0289|consensus

Probab=100.00  E-value=6.1e-34  Score=220.10  Aligned_cols=269  Identities=17%  Similarity=0.244  Sum_probs=235.2

Q ss_pred             eEEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEE
Q psy10867          6 EVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQ   85 (343)
Q Consensus         6 ~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~   85 (343)
                      ....+++.|..+.++|..+++.+..++||.. .|+.+.++|+...+.+++.|..|++|.............|..+|+.+.
T Consensus       232 ~~ilTGG~d~~av~~d~~s~q~l~~~~Gh~k-ki~~v~~~~~~~~v~~aSad~~i~vws~~~~s~~~~~~~h~~~V~~ls  310 (506)
T KOG0289|consen  232 SKILTGGEDKTAVLFDKPSNQILATLKGHTK-KITSVKFHKDLDTVITASADEIIRVWSVPLSSEPTSSRPHEEPVTGLS  310 (506)
T ss_pred             CcceecCCCCceEEEecchhhhhhhccCcce-EEEEEEeccchhheeecCCcceEEeeccccccCccccccccccceeee
Confidence            4566777889999999999999999999999 999999999999999999889999999988887777889999999999


Q ss_pred             ECCCCCEEEE-ecCCeEEEEEccCCceEEEeccc--CCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCC
Q psy10867         86 ASPDAAYIAV-SIETKLHMWQISSGRLLATASSH--YQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIP  162 (343)
Q Consensus        86 ~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~  162 (343)
                      .+|.|.||.+ +.|++..+.|++++..+......  .-.+++.+|+|||..|.+|..||.|++||+.+..          
T Consensus       311 ~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdlks~~----------  380 (506)
T KOG0289|consen  311 LHPTGEYLLSASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDLKSQT----------  380 (506)
T ss_pred             eccCCcEEEEecCCceEEEEEccCCcEEEEEeeccccceeEEeeEcCCceEEeccCCCceEEEEEcCCcc----------
Confidence            9999999997 78899999999999887666432  2358999999999999999999999999999864          


Q ss_pred             CCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCC--cEEEEEEcCCCCE
Q psy10867        163 GSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDT--RLTCVAFDGTEDN  240 (343)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~--~i~~~~~~~~~~~  240 (343)
                                  ....+.+|.++|..++|+.+|  .+|++++.|+.|++||+|..+...++..+.  ++.++.|.+.|.+
T Consensus       381 ------------~~a~Fpght~~vk~i~FsENG--Y~Lat~add~~V~lwDLRKl~n~kt~~l~~~~~v~s~~fD~SGt~  446 (506)
T KOG0289|consen  381 ------------NVAKFPGHTGPVKAISFSENG--YWLATAADDGSVKLWDLRKLKNFKTIQLDEKKEVNSLSFDQSGTY  446 (506)
T ss_pred             ------------ccccCCCCCCceeEEEeccCc--eEEEEEecCCeEEEEEehhhcccceeeccccccceeEEEcCCCCe
Confidence                        445567899999999999999  999999999999999999999888887544  5999999999999


Q ss_pred             EEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEec
Q psy10867        241 IYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHT  308 (343)
Q Consensus       241 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~  308 (343)
                      |+.++.+=+|++++-.+.         ...++..+..|.+..+.+.|....++++++|.|..++++.+
T Consensus       447 L~~~g~~l~Vy~~~k~~k---------~W~~~~~~~~~sg~st~v~Fg~~aq~l~s~smd~~l~~~a~  505 (506)
T KOG0289|consen  447 LGIAGSDLQVYICKKKTK---------SWTEIKELADHSGLSTGVRFGEHAQYLASTSMDAILRLYAL  505 (506)
T ss_pred             EEeecceeEEEEEecccc---------cceeeehhhhcccccceeeecccceEEeeccchhheEEeec
Confidence            999987777776664331         13346677788889999999999999999999999888764

>KOG0277|consensus

Probab=100.00  E-value=2.1e-34  Score=207.93  Aligned_cols=261  Identities=14%  Similarity=0.172  Sum_probs=212.1

Q ss_pred             CCCeEEEEecCCceEEEE---EecCCCCcceEEEEeCCc-eEEEEEcCCCeEEEEeCCC-cccceecccCCcceEEEEEC
Q psy10867         13 GSGAISVWEPKGGTLLMS---YKGASVLSPHSMCLLGND-YVLGVEKGKPMIQAWPVNS-QEKAQLRLICPGRISSMQAS   87 (343)
Q Consensus        13 ~dg~i~iwd~~~~~~~~~---~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~i~iw~~~~-~~~~~~~~~~~~~v~~~~~s   87 (343)
                      |.|.+.|-++..++.+..   +... + .+..++|+++. ..++++..||.++|||+.. ..+++.++.|..+|.++.|+
T Consensus        36 G~G~L~ile~~~~~gi~e~~s~d~~-D-~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~~~s~Pi~~~kEH~~EV~Svdwn  113 (311)
T KOG0277|consen   36 GNGRLFILEVTDPKGIQECQSYDTE-D-GLFDVAWSENHENQVIAASGDGSLRLFDLTMPSKPIHKFKEHKREVYSVDWN  113 (311)
T ss_pred             cCceEEEEecCCCCCeEEEEeeecc-c-ceeEeeecCCCcceEEEEecCceEEEeccCCCCcchhHHHhhhhheEEeccc
Confidence            368999999865444443   3333 3 78999999863 5555666669999999653 34567888999999999999


Q ss_pred             CCCC--EEEEecCCeEEEEEccCCceEEEecccCCCeEEEEEec-CCCEEEEecCCCeEEEeecCccceeeeeecCCCCC
Q psy10867         88 PDAA--YIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSA-DSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGS  164 (343)
Q Consensus        88 ~~~~--~l~~~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~  164 (343)
                      +-.+  +|.++.|++|++|+..-++.++++.+|...|...+|+| .++.+++++.|+.+++||++...            
T Consensus       114 ~~~r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~g------------  181 (311)
T KOG0277|consen  114 TVRRRIFLTSSWDGTIKLWDPNRPNSVQTFNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPG------------  181 (311)
T ss_pred             cccceeEEeeccCCceEeecCCCCcceEeecCCccEEEEEecCCCCCCeEEEccCCceEEEEEecCCC------------
Confidence            8543  44458999999999999999999999999999999999 77899999999999999998752            


Q ss_pred             CCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCce-EEEee-cCCcEEEEEEcCCC-CEE
Q psy10867        165 SGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGED-LLSLI-LDTRLTCVAFDGTE-DNI  241 (343)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~-~~~~~-~~~~i~~~~~~~~~-~~l  241 (343)
                                ....+..|...|.++.|+...+ ..+++|+.|+.|+.||+++.+. +..+. |.-.|..+.|+|.. ..|
T Consensus       182 ----------k~~~i~ah~~Eil~cdw~ky~~-~vl~Tg~vd~~vr~wDir~~r~pl~eL~gh~~AVRkvk~Sph~~~lL  250 (311)
T KOG0277|consen  182 ----------KFMSIEAHNSEILCCDWSKYNH-NVLATGGVDNLVRGWDIRNLRTPLFELNGHGLAVRKVKFSPHHASLL  250 (311)
T ss_pred             ----------ceeEEEeccceeEeecccccCC-cEEEecCCCceEEEEehhhccccceeecCCceEEEEEecCcchhhHh
Confidence                      2233678999999999998765 8999999999999999997653 44444 66789999999965 578


Q ss_pred             EEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEcc-CCCEEEEEeCCCcEEEEec
Q psy10867        242 YMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSI-TGITLLSSSADETLKIWHT  308 (343)
Q Consensus       242 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~s~~~dg~i~iwd~  308 (343)
                      ++++.|=+++|||.......          +.+...|..-+..+.||+ ++.++|+++.|+.++||+.
T Consensus       251 aSasYDmT~riw~~~~~ds~----------~e~~~~HtEFv~g~Dws~~~~~~vAs~gWDe~l~Vw~p  308 (311)
T KOG0277|consen  251 ASASYDMTVRIWDPERQDSA----------IETVDHHTEFVCGLDWSLFDPGQVASTGWDELLYVWNP  308 (311)
T ss_pred             hhccccceEEecccccchhh----------hhhhhccceEEeccccccccCceeeecccccceeeecc
Confidence            88999999999998864433          345567888899999998 5679999999999999984

>KOG0268|consensus

Probab=100.00  E-value=3e-35  Score=222.42  Aligned_cols=274  Identities=16%  Similarity=0.214  Sum_probs=237.5

Q ss_pred             EEEEecCCCCcceEEEEeCCc-eEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEEecCCeEEEEEc
Q psy10867         28 LMSYKGASVLSPHSMCLLGND-YVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQI  106 (343)
Q Consensus        28 ~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~  106 (343)
                      +..+.+|.+ .|.|++=+|.. ..+++|+.||.|+|||+...++...+..|.+.|..+++.. +.++.+|.|.+|+.|.+
T Consensus        59 v~~L~gHrd-GV~~lakhp~~ls~~aSGs~DG~VkiWnlsqR~~~~~f~AH~G~V~Gi~v~~-~~~~tvgdDKtvK~wk~  136 (433)
T KOG0268|consen   59 VGSLDGHRD-GVSCLAKHPNKLSTVASGSCDGEVKIWNLSQRECIRTFKAHEGLVRGICVTQ-TSFFTVGDDKTVKQWKI  136 (433)
T ss_pred             hhhcccccc-ccchhhcCcchhhhhhccccCceEEEEehhhhhhhheeecccCceeeEEecc-cceEEecCCcceeeeec
Confidence            556889999 99999999987 7888899999999999999999999999999999999986 77777899999999998


Q ss_pred             cCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccce
Q psy10867        107 SSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPV  186 (343)
Q Consensus       107 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  186 (343)
                      +. .++.++.+ ...+..+.-+..+..++|++.  .|.|||.+...                      |+..+.-....|
T Consensus       137 ~~-~p~~tilg-~s~~~gIdh~~~~~~FaTcGe--~i~IWD~~R~~----------------------Pv~smswG~Dti  190 (433)
T KOG0268|consen  137 DG-PPLHTILG-KSVYLGIDHHRKNSVFATCGE--QIDIWDEQRDN----------------------PVSSMSWGADSI  190 (433)
T ss_pred             cC-Ccceeeec-cccccccccccccccccccCc--eeeecccccCC----------------------ccceeecCCCce
Confidence            64 46666654 345777777777788999886  59999998754                      556666677889


Q ss_pred             EEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccc
Q psy10867        187 THVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHI  266 (343)
Q Consensus       187 ~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~  266 (343)
                      .++.|+|... .+|++++.|+.|.+||++++.++..+.....-+.++|+|++-.+.+|..|..++.||++....+     
T Consensus       191 ~svkfNpvET-sILas~~sDrsIvLyD~R~~~Pl~KVi~~mRTN~IswnPeafnF~~a~ED~nlY~~DmR~l~~p-----  264 (433)
T KOG0268|consen  191 SSVKFNPVET-SILASCASDRSIVLYDLRQASPLKKVILTMRTNTICWNPEAFNFVAANEDHNLYTYDMRNLSRP-----  264 (433)
T ss_pred             eEEecCCCcc-hheeeeccCCceEEEecccCCccceeeeeccccceecCccccceeeccccccceehhhhhhccc-----
Confidence            9999999876 7888899999999999999999999998889999999998888888999999999999987554     


Q ss_pred             cCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc--cCCceEEEEEccCCCeeeeccc
Q psy10867        267 QDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ--HKGPVLGAFLGLLPPAIHDYDF  340 (343)
Q Consensus       267 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~--~~~~v~~~~~sp~~~~l~~~~~  340 (343)
                           +....+|.+.|.++.|||.|+-+++||.|.+|+||.+..+.-...+.  -...|.++.||.|.+++++|+-
T Consensus       265 -----~~v~~dhvsAV~dVdfsptG~EfvsgsyDksIRIf~~~~~~SRdiYhtkRMq~V~~Vk~S~Dskyi~SGSd  335 (433)
T KOG0268|consen  265 -----LNVHKDHVSAVMDVDFSPTGQEFVSGSYDKSIRIFPVNHGHSRDIYHTKRMQHVFCVKYSMDSKYIISGSD  335 (433)
T ss_pred             -----chhhcccceeEEEeccCCCcchhccccccceEEEeecCCCcchhhhhHhhhheeeEEEEeccccEEEecCC
Confidence                 66788999999999999999999999999999999998776554443  4567999999999999999974

>KOG0293|consensus

Probab=100.00  E-value=2.3e-34  Score=221.19  Aligned_cols=266  Identities=17%  Similarity=0.184  Sum_probs=216.1

Q ss_pred             EEEecCCCCeEEEEecCC---ceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecc-cCCcceE
Q psy10867          7 VAFSYDGSGAISVWEPKG---GTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRL-ICPGRIS   82 (343)
Q Consensus         7 ~~~s~~~dg~i~iwd~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~-~~~~~v~   82 (343)
                      .+.|++.|.+..+|++..   -+..+++.+|.. +|.-+.||||.+++.+++.+..+.+||+.++.....+. ++...+.
T Consensus       238 yLAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~~-~V~yi~wSPDdryLlaCg~~e~~~lwDv~tgd~~~~y~~~~~~S~~  316 (519)
T KOG0293|consen  238 YLASASKDSTAIIWIVVYDVHFKLKKTLVGHSQ-PVSYIMWSPDDRYLLACGFDEVLSLWDVDTGDLRHLYPSGLGFSVS  316 (519)
T ss_pred             eEeeccCCceEEEEEEecCcceeeeeeeecccC-ceEEEEECCCCCeEEecCchHheeeccCCcchhhhhcccCcCCCcc
Confidence            344555589999998754   355888999999 99999999999887777777899999999999876554 4467899


Q ss_pred             EEEECCCCCEEEE-ecCCeEEEEEccCCceEEEecccC-CCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecC
Q psy10867         83 SMQASPDAAYIAV-SIETKLHMWQISSGRLLATASSHY-QPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFG  160 (343)
Q Consensus        83 ~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~  160 (343)
                      +++|.|||..+++ +.|+++..||++ |+.+...++-. ..|.+++.++||+++++.+.|..|++++..+.....     
T Consensus       317 sc~W~pDg~~~V~Gs~dr~i~~wdlD-gn~~~~W~gvr~~~v~dlait~Dgk~vl~v~~d~~i~l~~~e~~~dr~-----  390 (519)
T KOG0293|consen  317 SCAWCPDGFRFVTGSPDRTIIMWDLD-GNILGNWEGVRDPKVHDLAITYDGKYVLLVTVDKKIRLYNREARVDRG-----  390 (519)
T ss_pred             eeEEccCCceeEecCCCCcEEEecCC-cchhhcccccccceeEEEEEcCCCcEEEEEecccceeeechhhhhhhc-----
Confidence            9999999988887 679999999986 55555555432 468999999999999999999999999998753221     


Q ss_pred             CCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeec---CCcEEEEEEcC-
Q psy10867        161 IPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLIL---DTRLTCVAFDG-  236 (343)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~---~~~i~~~~~~~-  236 (343)
                                        +.....+|++++.+.++  +++++.-.+..+++||++..+.++.+..   ..-+..-||-- 
T Consensus       391 ------------------lise~~~its~~iS~d~--k~~LvnL~~qei~LWDl~e~~lv~kY~Ghkq~~fiIrSCFgg~  450 (519)
T KOG0293|consen  391 ------------------LISEEQPITSFSISKDG--KLALVNLQDQEIHLWDLEENKLVRKYFGHKQGHFIIRSCFGGG  450 (519)
T ss_pred             ------------------cccccCceeEEEEcCCC--cEEEEEcccCeeEEeecchhhHHHHhhcccccceEEEeccCCC
Confidence                              23356789999999999  8999999999999999998877776652   22345555654 


Q ss_pred             CCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCC-CEEEEEeCCCcEEEEeccc
Q psy10867        237 TEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITG-ITLLSSSADETLKIWHTIS  310 (343)
Q Consensus       237 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~s~~~dg~i~iwd~~~  310 (343)
                      +..++++|+.|++|+||+..++.           ++..+.||...|++++|+|.. ..+|++|.||+||||....
T Consensus       451 ~~~fiaSGSED~kvyIWhr~sgk-----------ll~~LsGHs~~vNcVswNP~~p~m~ASasDDgtIRIWg~~~  514 (519)
T KOG0293|consen  451 NDKFIASGSEDSKVYIWHRISGK-----------LLAVLSGHSKTVNCVSWNPADPEMFASASDDGTIRIWGPSD  514 (519)
T ss_pred             CcceEEecCCCceEEEEEccCCc-----------eeEeecCCcceeeEEecCCCCHHHhhccCCCCeEEEecCCc
Confidence            45899999999999999988754           377899999999999999954 5789999999999998753

>KOG0643|consensus

Probab=100.00  E-value=1.4e-33  Score=205.07  Aligned_cols=280  Identities=15%  Similarity=0.185  Sum_probs=233.0

Q ss_pred             EEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-ecCCeEEEEEccC
Q psy10867         30 SYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQISS  108 (343)
Q Consensus        30 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~  108 (343)
                      .+++|+. +++.+.++.+|.+|.+++.|.+..+|-..+++.+-.+.+|.+.|.++...-+.+.+++ +.|.++++||+++
T Consensus         5 ~l~GHER-plTqiKyN~eGDLlFscaKD~~~~vw~s~nGerlGty~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv~t   83 (327)
T KOG0643|consen    5 LLQGHER-PLTQIKYNREGDLLFSCAKDSTPTVWYSLNGERLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWDVET   83 (327)
T ss_pred             ccccCcc-ccceEEecCCCcEEEEecCCCCceEEEecCCceeeeecCCCceEEEEEecCCcceeeeccccceeEEEEcCC
Confidence            4678999 9999999999999999999999999999999999999999999999999999998887 6899999999999


Q ss_pred             CceEEEecccCCCeEEEEEecCCCEEEEecC-----CCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccc
Q psy10867        109 GRLLATASSHYQPITIVKWSADSNFIVTGGE-----DGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHS  183 (343)
Q Consensus       109 ~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (343)
                      |+++..++ ...+|..+.|+++|++++....     .+.|.++|++.....               ....++...+..+.
T Consensus        84 Gk~la~~k-~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~---------------~~s~ep~~kI~t~~  147 (327)
T KOG0643|consen   84 GKQLATWK-TNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSD---------------IDSEEPYLKIPTPD  147 (327)
T ss_pred             CcEEEEee-cCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhh---------------hcccCceEEecCCc
Confidence            99999887 4578999999999998887654     467999999864321               11234677777888


Q ss_pred             cceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee--cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeeccccc
Q psy10867        184 LPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI--LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRT  261 (343)
Q Consensus       184 ~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~  261 (343)
                      ..++.+-|.|.+  +.|++|.+||.|..||+++++.+....  |...|+.++++|+..++++++.|.+-++||..+....
T Consensus       148 skit~a~Wg~l~--~~ii~Ghe~G~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl~v~  225 (327)
T KOG0643|consen  148 SKITSALWGPLG--ETIIAGHEDGSISIYDARTGKELVDSDEEHSSKINDLQFSRDRTYFITGSKDTTAKLVDVRTLEVL  225 (327)
T ss_pred             cceeeeeecccC--CEEEEecCCCcEEEEEcccCceeeechhhhccccccccccCCcceEEecccCccceeeeccceeeE
Confidence            999999999999  899999999999999999987665543  7889999999999999999999999999999986654


Q ss_pred             ccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCc--------------EEEEecccceeeeecc-cCCceEEE
Q psy10867        262 RDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADET--------------LKIWHTISRQCLRTIQ-HKGPVLGA  326 (343)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~--------------i~iwd~~~~~~~~~~~-~~~~v~~~  326 (343)
                      +.+            ....+|++.+++|....++.|+....              -++|++-..+.+..++ |-++|+++
T Consensus       226 Kty------------~te~PvN~aaisP~~d~VilgGGqeA~dVTTT~~r~GKFEArFyh~i~eEEigrvkGHFGPINsv  293 (327)
T KOG0643|consen  226 KTY------------TTERPVNTAAISPLLDHVILGGGQEAMDVTTTSTRAGKFEARFYHLIFEEEIGRVKGHFGPINSV  293 (327)
T ss_pred             EEe------------eecccccceecccccceEEecCCceeeeeeeecccccchhhhHHHHHHHHHhccccccccCccee
Confidence            332            24678999999997777776654322              2333333345566666 99999999


Q ss_pred             EEccCCCeeeeccc
Q psy10867        327 FLGLLPPAIHDYDF  340 (343)
Q Consensus       327 ~~sp~~~~l~~~~~  340 (343)
                      +|+|+|+...+++-
T Consensus       294 AfhPdGksYsSGGE  307 (327)
T KOG0643|consen  294 AFHPDGKSYSSGGE  307 (327)
T ss_pred             EECCCCcccccCCC
Confidence            99999999888763

>KOG0973|consensus

Probab=100.00  E-value=1.4e-33  Score=241.13  Aligned_cols=276  Identities=18%  Similarity=0.244  Sum_probs=227.3

Q ss_pred             EecCCCCcceEEEEeCCceEEEEEc--CCCeEEEEeCCC------------cccceecccCCcceEEEEECCCCCEEEE-
Q psy10867         31 YKGASVLSPHSMCLLGNDYVLGVEK--GKPMIQAWPVNS------------QEKAQLRLICPGRISSMQASPDAAYIAV-   95 (343)
Q Consensus        31 ~~~~~~~~v~~~~~~~~~~~~~~~~--~~~~i~iw~~~~------------~~~~~~~~~~~~~v~~~~~s~~~~~l~~-   95 (343)
                      +-+|....|.++..+|++..+++|+  .|+.++||+.+.            .+.+.....|.+.|+|+.|+|||++||+ 
T Consensus         8 wv~H~~~~IfSIdv~pdg~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~lAsG   87 (942)
T KOG0973|consen    8 WVNHNEKSIFSIDVHPDGVKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGSYLASG   87 (942)
T ss_pred             ccccCCeeEEEEEecCCceeEecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCCeEeec
Confidence            4456555899999999999999998  778899998642            1122445589999999999999999998 


Q ss_pred             ecCCeEEEEEccC-------C-----------ceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeee
Q psy10867         96 SIETKLHMWQISS-------G-----------RLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTV  157 (343)
Q Consensus        96 ~~d~~i~v~~~~~-------~-----------~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~  157 (343)
                      +.|+.|.||....       |           +....+.+|.+.|..++|+|++.++++++.|++|.+|+..+..     
T Consensus        88 SDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~tF~-----  162 (942)
T KOG0973|consen   88 SDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVSVSLDNSVIIWNAKTFE-----  162 (942)
T ss_pred             cCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccEEEEecccceEEEEccccce-----
Confidence            5678899999762       1           2567788999999999999999999999999999999999863     


Q ss_pred             ecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-------cCCcEE
Q psy10867        158 AFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-------LDTRLT  230 (343)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-------~~~~i~  230 (343)
                                       .+..+.+|...|..+.|.|-|  +++++-+.|++|++|++.+....+.+.       ....+.
T Consensus       163 -----------------~~~vl~~H~s~VKGvs~DP~G--ky~ASqsdDrtikvwrt~dw~i~k~It~pf~~~~~~T~f~  223 (942)
T KOG0973|consen  163 -----------------LLKVLRGHQSLVKGVSWDPIG--KYFASQSDDRTLKVWRTSDWGIEKSITKPFEESPLTTFFL  223 (942)
T ss_pred             -----------------eeeeeecccccccceEECCcc--CeeeeecCCceEEEEEcccceeeEeeccchhhCCCcceee
Confidence                             667788999999999999999  899999999999999977755555543       234588


Q ss_pred             EEEEcCCCCEEEEEcC----CCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccC-----CC---------
Q psy10867        231 CVAFDGTEDNIYMGTS----EGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSIT-----GI---------  292 (343)
Q Consensus       231 ~~~~~~~~~~l~~~~~----d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-----~~---------  292 (343)
                      .+.|+|||++|++...    -..+.|.+-.+..           .-..+.||.+++.++.|+|.     .+         
T Consensus       224 RlSWSPDG~~las~nA~n~~~~~~~IieR~tWk-----------~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~  292 (942)
T KOG0973|consen  224 RLSWSPDGHHLASPNAVNGGKSTIAIIERGTWK-----------VDKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPNC  292 (942)
T ss_pred             ecccCCCcCeecchhhccCCcceeEEEecCCce-----------eeeeeecCCCceEEEEeChHHhccccccCCccCCCc
Confidence            9999999999998633    2356666654432           24568899999999999982     11         


Q ss_pred             ---EEEEEeCCCcEEEEecccceeeeecc--cCCceEEEEEccCCCeeeecccC
Q psy10867        293 ---TLLSSSADETLKIWHTISRQCLRTIQ--HKGPVLGAFLGLLPPAIHDYDFT  341 (343)
Q Consensus       293 ---~l~s~~~dg~i~iwd~~~~~~~~~~~--~~~~v~~~~~sp~~~~l~~~~~~  341 (343)
                         .+|+|+.|++|-||.....+++....  ....|.+++|+|||..|+++++.
T Consensus       293 ~y~i~AvgSqDrSlSVW~T~~~RPl~vi~~lf~~SI~DmsWspdG~~LfacS~D  346 (942)
T KOG0973|consen  293 YYCIAAVGSQDRSLSVWNTALPRPLFVIHNLFNKSIVDMSWSPDGFSLFACSLD  346 (942)
T ss_pred             ceEEEEEecCCccEEEEecCCCCchhhhhhhhcCceeeeeEcCCCCeEEEEecC
Confidence               67899999999999998888887776  67889999999999999999875

>KOG1036|consensus

Probab=100.00  E-value=5e-33  Score=206.14  Aligned_cols=269  Identities=14%  Similarity=0.197  Sum_probs=216.9

Q ss_pred             CCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEEecCCeEEEEEccCCceEEE
Q psy10867         35 SVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLAT  114 (343)
Q Consensus        35 ~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~~  114 (343)
                      ++ .|.++.|+|.+..|.+++-||.+++|+....+... ...|..++.+++|.++.+.+.++.||.|+.+|+.++... .
T Consensus        13 ~d-~IS~v~f~~~~~~LLvssWDgslrlYdv~~~~l~~-~~~~~~plL~c~F~d~~~~~~G~~dg~vr~~Dln~~~~~-~   89 (323)
T KOG1036|consen   13 ED-GISSVKFSPSSSDLLVSSWDGSLRLYDVPANSLKL-KFKHGAPLLDCAFADESTIVTGGLDGQVRRYDLNTGNED-Q   89 (323)
T ss_pred             hh-ceeeEEEcCcCCcEEEEeccCcEEEEeccchhhhh-heecCCceeeeeccCCceEEEeccCceEEEEEecCCcce-e
Confidence            44 89999999877555555566999999999875444 347899999999998888888899999999999988754 4


Q ss_pred             ecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecC
Q psy10867        115 ASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKL  194 (343)
Q Consensus       115 ~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  194 (343)
                      +..|..+|.|+.+++....+++|+.|++|++||.+.......+                       .....|.++.... 
T Consensus        90 igth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~~~~~~~-----------------------d~~kkVy~~~v~g-  145 (323)
T KOG1036|consen   90 IGTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRNKVVVGTF-----------------------DQGKKVYCMDVSG-  145 (323)
T ss_pred             eccCCCceEEEEeeccCCeEEEcccCccEEEEecccccccccc-----------------------ccCceEEEEeccC-
Confidence            5679999999999998889999999999999999974332222                       1334788877765 


Q ss_pred             CCceEEEEeeCCCeEEEEecCCCceEEEee---cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCC
Q psy10867        195 GAKSRVASVSHDRTCKIFDLCTGEDLLSLI---LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTS  271 (343)
Q Consensus       195 ~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~---~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~  271 (343)
                         +.|+.|+.+..+.+||+++........   ..-.+.++++.|++.-.++++-||+|.+=.+...+.....       
T Consensus       146 ---~~LvVg~~~r~v~iyDLRn~~~~~q~reS~lkyqtR~v~~~pn~eGy~~sSieGRVavE~~d~s~~~~sk-------  215 (323)
T KOG1036|consen  146 ---NRLVVGTSDRKVLIYDLRNLDEPFQRRESSLKYQTRCVALVPNGEGYVVSSIEGRVAVEYFDDSEEAQSK-------  215 (323)
T ss_pred             ---CEEEEeecCceEEEEEcccccchhhhccccceeEEEEEEEecCCCceEEEeecceEEEEccCCchHHhhh-------
Confidence               579999999999999999877655332   4567999999999999999999999987655543222211       


Q ss_pred             CCcccccc---------CcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc-cCCceEEEEEccCCCeeeeccc
Q psy10867        272 NPDFIGHE---------KQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVLGAFLGLLPPAIHDYDF  340 (343)
Q Consensus       272 ~~~~~~~~---------~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~  340 (343)
                      ...|+.|.         .+|++++|+|-...||||+.||.|.+||+.+.+.+..+. ....|..++|+.+|..|+.++.
T Consensus       216 kyaFkCHr~~~~~~~~~yPVNai~Fhp~~~tfaTgGsDG~V~~Wd~~~rKrl~q~~~~~~SI~slsfs~dG~~LAia~s  294 (323)
T KOG1036|consen  216 KYAFKCHRLSEKDTEIIYPVNAIAFHPIHGTFATGGSDGIVNIWDLFNRKRLKQLAKYETSISSLSFSMDGSLLAIASS  294 (323)
T ss_pred             ceeEEeeecccCCceEEEEeceeEeccccceEEecCCCceEEEccCcchhhhhhccCCCCceEEEEeccCCCeEEEEec
Confidence            33455554         369999999999999999999999999999999888887 6678999999999999998764

>PTZ00420 coronin; Provisional

Probab=100.00  E-value=5.8e-32  Score=228.22  Aligned_cols=247  Identities=12%  Similarity=0.106  Sum_probs=188.2

Q ss_pred             EcCCCeEEEEeCCCcccceecccCCcceEEEEECCC-CCEEEE-ecCCeEEEEEccCCc--------eEEEecccCCCeE
Q psy10867         54 EKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPD-AAYIAV-SIETKLHMWQISSGR--------LLATASSHYQPIT  123 (343)
Q Consensus        54 ~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~-~~d~~i~v~~~~~~~--------~~~~~~~~~~~v~  123 (343)
                      |+.++.+++|+......+..+.+|.+.|.+++|+|+ +.+|++ +.|+.|++||+.++.        ++..+.+|...|.
T Consensus        50 GG~~gvI~L~~~~r~~~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~  129 (568)
T PTZ00420         50 GGLIGAIRLENQMRKPPVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKIS  129 (568)
T ss_pred             CCceeEEEeeecCCCceEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEE
Confidence            444578999998877777778899999999999996 678886 789999999997642        3446788999999


Q ss_pred             EEEEecCCCE-EEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEE
Q psy10867        124 IVKWSADSNF-IVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVAS  202 (343)
Q Consensus       124 ~~~~~~~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~  202 (343)
                      +++|+|++.. +++++.|+.|++||++++....                      .+. |...|.+++|+|+|  .+|++
T Consensus       130 sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~----------------------~i~-~~~~V~SlswspdG--~lLat  184 (568)
T PTZ00420        130 IIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAF----------------------QIN-MPKKLSSLKWNIKG--NLLSG  184 (568)
T ss_pred             EEEECCCCCeEEEEEeCCCeEEEEECCCCcEEE----------------------EEe-cCCcEEEEEECCCC--CEEEE
Confidence            9999998875 5789999999999999864322                      222 55789999999999  79999


Q ss_pred             eeCCCeEEEEecCCCceEEEee-cCCcEE-----EEEEcCCCCEEEEEcCCC----cEEEEEeecccccccccccCCCCC
Q psy10867        203 VSHDRTCKIFDLCTGEDLLSLI-LDTRLT-----CVAFDGTEDNIYMGTSEG----VIKSFCLRQVPRTRDHHIQDSTSN  272 (343)
Q Consensus       203 ~~~d~~i~~wd~~~~~~~~~~~-~~~~i~-----~~~~~~~~~~l~~~~~d~----~i~i~d~~~~~~~~~~~~~~~~~~  272 (343)
                      ++.|+.|++||+++++.+..+. |.+.+.     ...|++++.+|++++.++    .|++||++.......        .
T Consensus       185 ~s~D~~IrIwD~Rsg~~i~tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~--------~  256 (568)
T PTZ00420        185 TCVGKHMHIIDPRKQEIASSFHIHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALV--------T  256 (568)
T ss_pred             EecCCEEEEEECCCCcEEEEEecccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceE--------E
Confidence            9999999999999999888776 444332     234568999999977664    799999986432211        1


Q ss_pred             CccccccCcEEEEEEccCCCEEEEEeCCCcEEEEeccccee--eeecccCCceEEEEEccCCC
Q psy10867        273 PDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQC--LRTIQHKGPVLGAFLGLLPP  333 (343)
Q Consensus       273 ~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~--~~~~~~~~~v~~~~~sp~~~  333 (343)
                      ..+..+.+.+......+++.++++|+.|+.|++|++..+..  +..+.+..++.+++|.|...
T Consensus       257 ~~ld~~~~~L~p~~D~~tg~l~lsGkGD~tIr~~e~~~~~~~~l~~~~s~~p~~g~~f~Pkr~  319 (568)
T PTZ00420        257 MSIDNASAPLIPHYDESTGLIYLIGKGDGNCRYYQHSLGSIRKVNEYKSCSPFRSFGFLPKQI  319 (568)
T ss_pred             EEecCCccceEEeeeCCCCCEEEEEECCCeEEEEEccCCcEEeecccccCCCccceEEccccc
Confidence            12222333333344455688999999999999999987642  23333678889999999743

>KOG0772|consensus

Probab=100.00  E-value=2.6e-33  Score=221.22  Aligned_cols=285  Identities=16%  Similarity=0.189  Sum_probs=219.0

Q ss_pred             ceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccc-----eecccCCcceEEEEECCCCCEEE-EecC
Q psy10867         25 GTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKA-----QLRLICPGRISSMQASPDAAYIA-VSIE   98 (343)
Q Consensus        25 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~-----~~~~~~~~~v~~~~~s~~~~~l~-~~~d   98 (343)
                      +.....+++|.. .|.++++.|.|..+++|+-|..|++||+......     +........|.+++|++.|..|+ .+..
T Consensus       157 ~shEi~l~hgtk-~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLvvsg~  235 (641)
T KOG0772|consen  157 GSHEIQLKHGTK-IVSALAVDPSGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQILVVSGS  235 (641)
T ss_pred             ccceEeccCCce-EEEEeeecCCCceeeeccccceEEEEecccccccchhhhccCcccccccceeeecCCCCeEEEEecC
Confidence            344556888888 9999999999988899988899999999865332     22224456799999999886555 4777


Q ss_pred             CeEEEEEccCCceEEE-------------ecccCCCeEEEEEecCC-CEEEEecCCCeEEEeecCccceeeeeecCCCCC
Q psy10867         99 TKLHMWQISSGRLLAT-------------ASSHYQPITIVKWSADS-NFIVTGGEDGTICVWQLSRLICKQTVAFGIPGS  164 (343)
Q Consensus        99 ~~i~v~~~~~~~~~~~-------------~~~~~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~  164 (343)
                      ...+|+|-. |..+..             .++|...++|.+|+|+. ..+++++.||++++||+...+....+-      
T Consensus       236 aqakl~DRd-G~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVi------  308 (641)
T KOG0772|consen  236 AQAKLLDRD-GFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVI------  308 (641)
T ss_pred             cceeEEccC-CceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEE------
Confidence            889999954 433222             25899999999999954 589999999999999998764322111      


Q ss_pred             CCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCce--EEEee--cCC--cEEEEEEcCCC
Q psy10867        165 SGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGED--LLSLI--LDT--RLTCVAFDGTE  238 (343)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~--~~~~~--~~~--~i~~~~~~~~~  238 (343)
                                ......+..-+++.++|++++  .++|+|..||.|.+|+......  ...+.  |..  .|+++.|+++|
T Consensus       309 ----------k~k~~~g~Rv~~tsC~~nrdg--~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg  376 (641)
T KOG0772|consen  309 ----------KTKPAGGKRVPVTSCAWNRDG--KLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDG  376 (641)
T ss_pred             ----------eeccCCCcccCceeeecCCCc--chhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEecccc
Confidence                      111122455678999999999  7899999999999999754432  22222  433  79999999999


Q ss_pred             CEEEEEcCCCcEEEEEeecccccccccccCCCCCCcccc--ccCcEEEEEEccCCCEEEEEeC------CCcEEEEeccc
Q psy10867        239 DNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIG--HEKQVTSLSCSITGITLLSSSA------DETLKIWHTIS  310 (343)
Q Consensus       239 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~s~~~------dg~i~iwd~~~  310 (343)
                      ++|++-+.|+.+++||++........          ..+  ...+-+.++|||+.++|++|+.      .|.+.+||..+
T Consensus       377 ~~LlSRg~D~tLKvWDLrq~kkpL~~----------~tgL~t~~~~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~d~~t  446 (641)
T KOG0772|consen  377 NYLLSRGFDDTLKVWDLRQFKKPLNV----------RTGLPTPFPGTDCCFSPDDKLILTGTSAPNGMTAGTLFFFDRMT  446 (641)
T ss_pred             chhhhccCCCceeeeeccccccchhh----------hcCCCccCCCCccccCCCceEEEecccccCCCCCceEEEEeccc
Confidence            99999999999999999987654321          111  2234577899999999998864      47899999999


Q ss_pred             ceeeeecc-cCCceEEEEEccCCCeeeecc
Q psy10867        311 RQCLRTIQ-HKGPVLGAFLGLLPPAIHDYD  339 (343)
Q Consensus       311 ~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~  339 (343)
                      .+.+.++. ....|..+.|+|.=+.|++++
T Consensus       447 ~d~v~ki~i~~aSvv~~~WhpkLNQi~~gs  476 (641)
T KOG0772|consen  447 LDTVYKIDISTASVVRCLWHPKLNQIFAGS  476 (641)
T ss_pred             eeeEEEecCCCceEEEEeecchhhheeeec
Confidence            99999988 788899999999888887765

>KOG0640|consensus

Probab=100.00  E-value=9.7e-34  Score=210.37  Aligned_cols=284  Identities=13%  Similarity=0.194  Sum_probs=226.4

Q ss_pred             EEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCc------------------ccceecccCCcceEEEEECCCC
Q psy10867         29 MSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQ------------------EKAQLRLICPGRISSMQASPDA   90 (343)
Q Consensus        29 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~------------------~~~~~~~~~~~~v~~~~~s~~~   90 (343)
                      ..+..|+. ++++.+|+|||.++++|+.|..|+|.|++..                  ..++++..|.++|+++.|+|..
T Consensus       106 ~ylt~HK~-~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHPre  184 (430)
T KOG0640|consen  106 KYLTSHKS-PCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHPRE  184 (430)
T ss_pred             EEEeeccc-ceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecchh
Confidence            44677888 9999999999999999999999999998611                  1235566899999999999999


Q ss_pred             CEEEE-ecCCeEEEEEccCCceEEEec--ccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCC
Q psy10867         91 AYIAV-SIETKLHMWQISSGRLLATAS--SHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGK  167 (343)
Q Consensus        91 ~~l~~-~~d~~i~v~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~  167 (343)
                      .+|++ +.|++|+++|+......+.++  ....+|.++.|+|.|.+|+.|.....+++||+++.++-..           
T Consensus       185 ~ILiS~srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T~Qcfvs-----------  253 (430)
T KOG0640|consen  185 TILISGSRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNTYQCFVS-----------  253 (430)
T ss_pred             heEEeccCCCeEEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEEecCCCceeEEeccceeEeee-----------
Confidence            99998 689999999987553333222  3456899999999999999999999999999999765432           


Q ss_pred             ccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee--c-CCcEEEEEEcCCCCEEEEE
Q psy10867        168 GVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI--L-DTRLTCVAFDGTEDNIYMG  244 (343)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~--~-~~~i~~~~~~~~~~~l~~~  244 (343)
                              -..-.+|.+.|+++.+++.+  ++.++++.||.|++||--+++++.++.  | ...|.+..|..+++++++.
T Consensus       254 --------anPd~qht~ai~~V~Ys~t~--~lYvTaSkDG~IklwDGVS~rCv~t~~~AH~gsevcSa~Ftkn~kyiLsS  323 (430)
T KOG0640|consen  254 --------ANPDDQHTGAITQVRYSSTG--SLYVTASKDGAIKLWDGVSNRCVRTIGNAHGGSEVCSAVFTKNGKYILSS  323 (430)
T ss_pred             --------cCcccccccceeEEEecCCc--cEEEEeccCCcEEeeccccHHHHHHHHhhcCCceeeeEEEccCCeEEeec
Confidence                    12335699999999999999  899999999999999999999998886  3 5569999999999999999


Q ss_pred             cCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEe-CCCcEEEEecccceeeeecc--cCC
Q psy10867        245 TSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSS-ADETLKIWHTISRQCLRTIQ--HKG  321 (343)
Q Consensus       245 ~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~--~~~  321 (343)
                      +.|..+++|.+.+.....++.-....      +...--+...|+....+++.-. ..+.+.-||.+++..+..+.  |.+
T Consensus       324 G~DS~vkLWEi~t~R~l~~YtGAg~t------grq~~rtqAvFNhtEdyVl~pDEas~slcsWdaRtadr~~l~slgHn~  397 (430)
T KOG0640|consen  324 GKDSTVKLWEISTGRMLKEYTGAGTT------GRQKHRTQAVFNHTEDYVLFPDEASNSLCSWDARTADRVALLSLGHNG  397 (430)
T ss_pred             CCcceeeeeeecCCceEEEEecCCcc------cchhhhhhhhhcCccceEEccccccCceeeccccchhhhhhcccCCCC
Confidence            99999999999987665544211100      1111123345666666665443 34678999999887666555  999


Q ss_pred             ceEEEEEccCCCeeeeccc
Q psy10867        322 PVLGAFLGLLPPAIHDYDF  340 (343)
Q Consensus       322 ~v~~~~~sp~~~~l~~~~~  340 (343)
                      .++.+.-||.+.-+++++-
T Consensus       398 a~R~i~HSP~~p~FmTcsd  416 (430)
T KOG0640|consen  398 AVRWIVHSPVEPAFMTCSD  416 (430)
T ss_pred             CceEEEeCCCCCceeeecc
Confidence            9999999999999998864

>KOG0300|consensus

Probab=100.00  E-value=2.3e-33  Score=209.22  Aligned_cols=273  Identities=19%  Similarity=0.268  Sum_probs=234.7

Q ss_pred             eEEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeC------CCc-----------
Q psy10867          6 EVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPV------NSQ-----------   68 (343)
Q Consensus         6 ~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~------~~~-----------   68 (343)
                      .++-+++.|.+.+||.+++|.++.++.+|.+ .|+++.|++.+.++.+++.|++.+||..      ...           
T Consensus       161 pi~gtASADhTA~iWs~Esg~CL~~Y~GH~G-SVNsikfh~s~~L~lTaSGD~taHIW~~av~~~vP~~~a~~~hSsEeE  239 (481)
T KOG0300|consen  161 PICGTASADHTARIWSLESGACLATYTGHTG-SVNSIKFHNSGLLLLTASGDETAHIWKAAVNWEVPSNNAPSDHSSEEE  239 (481)
T ss_pred             cceeecccccceeEEeeccccceeeeccccc-ceeeEEeccccceEEEccCCcchHHHHHhhcCcCCCCCCCCCCCchhh
Confidence            3566788899999999999999999999999 9999999999999999999999999972      110           


Q ss_pred             -----------------------ccceecccCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEE
Q psy10867         69 -----------------------EKAQLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITI  124 (343)
Q Consensus        69 -----------------------~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~  124 (343)
                                             .++..+.+|...|.+..|...|+.+++ ++|.+-.+||+++|+.+..+.+|....+.
T Consensus       240 ~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWDRTAnlwDVEtge~v~~LtGHd~ELtH  319 (481)
T KOG0300|consen  240 EEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMVTASWDRTANLWDVETGEVVNILTGHDSELTH  319 (481)
T ss_pred             hhcccccccccccccccCCceeeeeeeeeeccccceEehhhhcCcceeeeeeccccceeeeeccCceeccccCcchhccc
Confidence                                   011224577888889999888887776 89999999999999999999999999999


Q ss_pred             EEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEee
Q psy10867        125 VKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVS  204 (343)
Q Consensus       125 ~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~  204 (343)
                      ++-+|..+++++.+.|.+.++||++...                     ..+..+.+|...|+++.|..+.   .+++|+
T Consensus       320 cstHptQrLVvTsSrDtTFRLWDFReaI---------------------~sV~VFQGHtdtVTS~vF~~dd---~vVSgS  375 (481)
T KOG0300|consen  320 CSTHPTQRLVVTSSRDTTFRLWDFREAI---------------------QSVAVFQGHTDTVTSVVFNTDD---RVVSGS  375 (481)
T ss_pred             cccCCcceEEEEeccCceeEeccchhhc---------------------ceeeeecccccceeEEEEecCC---ceeecC
Confidence            9999999999999999999999998531                     2667889999999999999875   699999


Q ss_pred             CCCeEEEEecCCCc-eEEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEE
Q psy10867        205 HDRTCKIFDLCTGE-DLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVT  283 (343)
Q Consensus       205 ~d~~i~~wd~~~~~-~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  283 (343)
                      .|.+|++||+++.+ ++.++...++++.++.+..++.++.-..+..|++||+......+.       +...-++|...|+
T Consensus       376 DDrTvKvWdLrNMRsplATIRtdS~~NRvavs~g~~iIAiPhDNRqvRlfDlnG~RlaRl-------PrtsRqgHrRMV~  448 (481)
T KOG0300|consen  376 DDRTVKVWDLRNMRSPLATIRTDSPANRVAVSKGHPIIAIPHDNRQVRLFDLNGNRLARL-------PRTSRQGHRRMVT  448 (481)
T ss_pred             CCceEEEeeeccccCcceeeecCCccceeEeecCCceEEeccCCceEEEEecCCCccccC-------Ccccccccceeee
Confidence            99999999999875 577888999999999999999999999999999999987554332       1335578999999


Q ss_pred             EEEEccCC--CEEEEEeCCCcEEEEeccc
Q psy10867        284 SLSCSITG--ITLLSSSADETLKIWHTIS  310 (343)
Q Consensus       284 ~~~~s~~~--~~l~s~~~dg~i~iwd~~~  310 (343)
                      |++|..+.  .-|++++.|..+.-|++..
T Consensus       449 c~AW~eehp~cnLftcGFDR~v~gW~in~  477 (481)
T KOG0300|consen  449 CCAWLEEHPACNLFTCGFDRMVAGWKINT  477 (481)
T ss_pred             eeeccccCcccccccccccceeeeeEecc
Confidence            99997654  3588999999999998764

>KOG0294|consensus

Probab=100.00  E-value=1.5e-32  Score=204.30  Aligned_cols=262  Identities=16%  Similarity=0.243  Sum_probs=217.6

Q ss_pred             EEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCC---CEEEEecCCeEEE
Q psy10867         27 LLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDA---AYIAVSIETKLHM  103 (343)
Q Consensus        27 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~---~~l~~~~d~~i~v  103 (343)
                      ++..++.|.. ++++++.+  +.++++|+.|-+|+|||+........+..|.+.|+++.|.++-   .+|.++.||.|.+
T Consensus        35 ~lF~~~aH~~-sitavAVs--~~~~aSGssDetI~IYDm~k~~qlg~ll~HagsitaL~F~~~~S~shLlS~sdDG~i~i  111 (362)
T KOG0294|consen   35 PLFAFSAHAG-SITALAVS--GPYVASGSSDETIHIYDMRKRKQLGILLSHAGSITALKFYPPLSKSHLLSGSDDGHIII  111 (362)
T ss_pred             cccccccccc-ceeEEEec--ceeEeccCCCCcEEEEeccchhhhcceeccccceEEEEecCCcchhheeeecCCCcEEE
Confidence            3566788999 99999985  7999999999999999999999888888999999999999876   5666789999999


Q ss_pred             EEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccc
Q psy10867        104 WQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHS  183 (343)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (343)
                      |+...-.++..+++|.+.|+.++.+|.+++-++.+.|+.++.||+-+++......                       -.
T Consensus       112 w~~~~W~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr~a~v~~-----------------------L~  168 (362)
T KOG0294|consen  112 WRVGSWELLKSLKAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVRGRVAFVLN-----------------------LK  168 (362)
T ss_pred             EEcCCeEEeeeecccccccceeEecCCCceEEEEcCCceeeeehhhcCccceeec-----------------------cC
Confidence            9999999999999999999999999999999999999999999998875433221                       22


Q ss_pred             cceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeeccccccc
Q psy10867        184 LPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRD  263 (343)
Q Consensus       184 ~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~  263 (343)
                      ...+.+.|+|.|  .+++.+..+ .|-+|.+.+.+....+..+..+.++.|. ++..|++|..|+.|.+||....     
T Consensus       169 ~~at~v~w~~~G--d~F~v~~~~-~i~i~q~d~A~v~~~i~~~~r~l~~~~l-~~~~L~vG~d~~~i~~~D~ds~-----  239 (362)
T KOG0294|consen  169 NKATLVSWSPQG--DHFVVSGRN-KIDIYQLDNASVFREIENPKRILCATFL-DGSELLVGGDNEWISLKDTDSD-----  239 (362)
T ss_pred             CcceeeEEcCCC--CEEEEEecc-EEEEEecccHhHhhhhhccccceeeeec-CCceEEEecCCceEEEeccCCC-----
Confidence            233449999999  666666554 6899999888887777777777777775 4778999999999999998863     


Q ss_pred             ccccCCCCCCccccccCcEEEEEE--ccCCCEEEEEeCCCcEEEEecccc-----eeeeecccCCceEEEEEc
Q psy10867        264 HHIQDSTSNPDFIGHEKQVTSLSC--SITGITLLSSSADETLKIWHTISR-----QCLRTIQHKGPVLGAFLG  329 (343)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~v~~~~~--s~~~~~l~s~~~dg~i~iwd~~~~-----~~~~~~~~~~~v~~~~~s  329 (343)
                            .+...+.+|..+|.++.+  .|++.+|+++|.||.|++||++..     +++..+.....++|+...
T Consensus       240 ------~~~~~~~AH~~RVK~i~~~~~~~~~~lvTaSSDG~I~vWd~~~~~k~~~~~l~e~n~~~RltCl~~~  306 (362)
T KOG0294|consen  240 ------TPLTEFLAHENRVKDIASYTNPEHEYLVTASSDGFIKVWDIDMETKKRPTLLAELNTNVRLTCLRVK  306 (362)
T ss_pred             ------ccceeeecchhheeeeEEEecCCceEEEEeccCceEEEEEccccccCCcceeEEeecCCccceeeeh
Confidence                  336678899999999984  567889999999999999999866     456666666677776653

>KOG2106|consensus

Probab=100.00  E-value=1.1e-31  Score=211.49  Aligned_cols=316  Identities=12%  Similarity=0.115  Sum_probs=247.6

Q ss_pred             ccceEEEecCCC------------CeEEEEecCCceEEEEEecCCCCcceEEEEeCCc-eEEEEEcCCCeEEEEeCCCcc
Q psy10867          3 LLNEVAFSYDGS------------GAISVWEPKGGTLLMSYKGASVLSPHSMCLLGND-YVLGVEKGKPMIQAWPVNSQE   69 (343)
Q Consensus         3 ~v~~~~~s~~~d------------g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~i~iw~~~~~~   69 (343)
                      -|.+++||....            ..+.|||+..+......+..+. .|....|+|.+ .++++... +.+..|+.+.+.
T Consensus       156 GV~~vaFsk~~~G~~l~~vD~s~~h~lSVWdWqk~~~~~~vk~sne-~v~~a~FHPtd~nliit~Gk-~H~~Fw~~~~~~  233 (626)
T KOG2106|consen  156 GVTCVAFSKINGGSLLCAVDDSNPHMLSVWDWQKKAKLGPVKTSNE-VVFLATFHPTDPNLIITCGK-GHLYFWTLRGGS  233 (626)
T ss_pred             cceeeeecccCCCceEEEecCCCccccchhhchhhhccCcceeccc-eEEEEEeccCCCcEEEEeCC-ceEEEEEccCCc
Confidence            366778877653            4668899988888888887777 89999999965 56666666 899999998876


Q ss_pred             ccee---cc-cCCcceEEEEECCCCCEEEEecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEE
Q psy10867         70 KAQL---RL-ICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICV  145 (343)
Q Consensus        70 ~~~~---~~-~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~i  145 (343)
                      ..+.   +. .....|.|+.|.++|..+.+.++|.|.||+..+.+..+....|.+.|.+++...+|.+| +|+.|..|..
T Consensus       234 l~k~~~~fek~ekk~Vl~v~F~engdviTgDS~G~i~Iw~~~~~~~~k~~~aH~ggv~~L~~lr~Gtll-SGgKDRki~~  312 (626)
T KOG2106|consen  234 LVKRQGIFEKREKKFVLCVTFLENGDVITGDSGGNILIWSKGTNRISKQVHAHDGGVFSLCMLRDGTLL-SGGKDRKIIL  312 (626)
T ss_pred             eEEEeeccccccceEEEEEEEcCCCCEEeecCCceEEEEeCCCceEEeEeeecCCceEEEEEecCccEe-ecCccceEEe
Confidence            5532   22 22367999999999999999899999999998877777777999999999999888755 5999999999


Q ss_pred             eecCccceeeeeecCCCCCCCCc---------c----------ccccceeeeecccccceEEEEeecCCCceEEEEeeCC
Q psy10867        146 WQLSRLICKQTVAFGIPGSSGKG---------V----------TGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHD  206 (343)
Q Consensus       146 wd~~~~~~~~~~~~~~~~~~~~~---------~----------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d  206 (343)
                      || ...+..+..+++......+.         +          .-.........+|......++.+|+.  .++++++.|
T Consensus       313 Wd-~~y~k~r~~elPe~~G~iRtv~e~~~di~vGTtrN~iL~Gt~~~~f~~~v~gh~delwgla~hps~--~q~~T~gqd  389 (626)
T KOG2106|consen  313 WD-DNYRKLRETELPEQFGPIRTVAEGKGDILVGTTRNFILQGTLENGFTLTVQGHGDELWGLATHPSK--NQLLTCGQD  389 (626)
T ss_pred             cc-ccccccccccCchhcCCeeEEecCCCcEEEeeccceEEEeeecCCceEEEEecccceeeEEcCCCh--hheeeccCc
Confidence            99 33333343333322111000         0          00111223445788899999999998  799999999


Q ss_pred             CeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEE
Q psy10867        207 RTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLS  286 (343)
Q Consensus       207 ~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  286 (343)
                      +.+++|+  ..+...+.....+..++.|+|.| .+++|+..|...+.|.++....            .+...+.+++.++
T Consensus       390 k~v~lW~--~~k~~wt~~~~d~~~~~~fhpsg-~va~Gt~~G~w~V~d~e~~~lv------------~~~~d~~~ls~v~  454 (626)
T KOG2106|consen  390 KHVRLWN--DHKLEWTKIIEDPAECADFHPSG-VVAVGTATGRWFVLDTETQDLV------------TIHTDNEQLSVVR  454 (626)
T ss_pred             ceEEEcc--CCceeEEEEecCceeEeeccCcc-eEEEeeccceEEEEecccceeE------------EEEecCCceEEEE
Confidence            9999999  67778888889999999999999 9999999999999999873322            2223378899999


Q ss_pred             EccCCCEEEEEeCCCcEEEEeccc-ceeeeecc--cCCceEEEEEccCCCeeeecc
Q psy10867        287 CSITGITLLSSSADETLKIWHTIS-RQCLRTIQ--HKGPVLGAFLGLLPPAIHDYD  339 (343)
Q Consensus       287 ~s~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~--~~~~v~~~~~sp~~~~l~~~~  339 (343)
                      |+|+|.+||.|+.|+.|++|.+.. |+.+....  +..+|+.+.||+|+++|.+.+
T Consensus       455 ysp~G~~lAvgs~d~~iyiy~Vs~~g~~y~r~~k~~gs~ithLDwS~Ds~~~~~~S  510 (626)
T KOG2106|consen  455 YSPDGAFLAVGSHDNHIYIYRVSANGRKYSRVGKCSGSPITHLDWSSDSQFLVSNS  510 (626)
T ss_pred             EcCCCCEEEEecCCCeEEEEEECCCCcEEEEeeeecCceeEEeeecCCCceEEecc
Confidence            999999999999999999999874 55555555  668999999999999998765

>PTZ00421 coronin; Provisional

Probab=100.00  E-value=2.4e-31  Score=223.45  Aligned_cols=248  Identities=14%  Similarity=0.196  Sum_probs=188.6

Q ss_pred             EEecCCCCeEEEEecCCceEE-------------EEEecCCCCcceEEEEeC-CceEEEEEcCCCeEEEEeCCCcc----
Q psy10867          8 AFSYDGSGAISVWEPKGGTLL-------------MSYKGASVLSPHSMCLLG-NDYVLGVEKGKPMIQAWPVNSQE----   69 (343)
Q Consensus         8 ~~s~~~dg~i~iwd~~~~~~~-------------~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~i~iw~~~~~~----   69 (343)
                      .++++.+.....|+...+..+             ..+.+|.+ .|.+++|+| ++.++++++.|++|++||+.++.    
T Consensus        35 ~~~~n~~~~a~~w~~~gg~~v~~~~~~G~~~~~~~~l~GH~~-~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~~~  113 (493)
T PTZ00421         35 TIACNDRFIAVPWQQLGSTAVLKHTDYGKLASNPPILLGQEG-PIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQN  113 (493)
T ss_pred             cEeECCceEEEEEecCCceEEeeccccccCCCCCceEeCCCC-CEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCccccc
Confidence            445555556666765433322             14778998 999999999 78889999999999999997652    


Q ss_pred             ---cceecccCCcceEEEEECCCC-CEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEE
Q psy10867         70 ---KAQLRLICPGRISSMQASPDA-AYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTIC  144 (343)
Q Consensus        70 ---~~~~~~~~~~~v~~~~~s~~~-~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~  144 (343)
                         .+..+.+|...|.+++|+|++ .+|++ +.|+.|++||+.+++.+..+.+|...|.+++|+|++++|++++.|+.|+
T Consensus       114 ~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~~~l~~h~~~V~sla~spdG~lLatgs~Dg~Ir  193 (493)
T PTZ00421        114 ISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAVEVIKCHSDQITSLEWNLDGSLLCTTSKDKKLN  193 (493)
T ss_pred             cCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeEEEEEcCCCCceEEEEEECCCCEEEEecCCCEEE
Confidence               345667899999999999975 57776 7899999999999999999999999999999999999999999999999


Q ss_pred             EeecCccceeeeeecCCCCCCCCccccccceeeeecccccc-eEEEEeecCCCceEEEEee----CCCeEEEEecCCCce
Q psy10867        145 VWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLP-VTHVTLSKLGAKSRVASVS----HDRTCKIFDLCTGED  219 (343)
Q Consensus       145 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~l~~~~----~d~~i~~wd~~~~~~  219 (343)
                      +||++++..                      +..+.+|... +..+.|.+++  ..+++++    .|+.|++||+++...
T Consensus       194 IwD~rsg~~----------------------v~tl~~H~~~~~~~~~w~~~~--~~ivt~G~s~s~Dr~VklWDlr~~~~  249 (493)
T PTZ00421        194 IIDPRDGTI----------------------VSSVEAHASAKSQRCLWAKRK--DLIITLGCSKSQQRQIMLWDTRKMAS  249 (493)
T ss_pred             EEECCCCcE----------------------EEEEecCCCCcceEEEEcCCC--CeEEEEecCCCCCCeEEEEeCCCCCC
Confidence            999998643                      3444567654 3467788876  4565543    479999999987653


Q ss_pred             -EEEee--cCCcEEEEEEcCCCCEEEEEc-CCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccC
Q psy10867        220 -LLSLI--LDTRLTCVAFDGTEDNIYMGT-SEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSIT  290 (343)
Q Consensus       220 -~~~~~--~~~~i~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~  290 (343)
                       +....  ....+....|++++++|++++ .|+.|++||+.........          -..+..++..++|.|.
T Consensus       250 p~~~~~~d~~~~~~~~~~d~d~~~L~lggkgDg~Iriwdl~~~~~~~~~----------~~~s~~~~~g~~~~pk  314 (493)
T PTZ00421        250 PYSTVDLDQSSALFIPFFDEDTNLLYIGSKGEGNIRCFELMNERLTFCS----------SYSSVEPHKGLCMMPK  314 (493)
T ss_pred             ceeEeccCCCCceEEEEEcCCCCEEEEEEeCCCeEEEEEeeCCceEEEe----------eccCCCCCcceEeccc
Confidence             33332  234566778999999999887 5999999999875432111          1123456777888875

>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein

Probab=100.00  E-value=6.4e-31  Score=213.55  Aligned_cols=284  Identities=11%  Similarity=0.102  Sum_probs=216.6

Q ss_pred             eEEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEE-EEEcCCCeEEEEeCCCcccceecccCCcceEEE
Q psy10867          6 EVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVL-GVEKGKPMIQAWPVNSQEKAQLRLICPGRISSM   84 (343)
Q Consensus         6 ~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~   84 (343)
                      .+.+|...|+.|++||+.+++.+..+..+.  .+.+++|+|++..+ +++..++.|++||..+++....+..+. .+..+
T Consensus         2 ~~~~s~~~d~~v~~~d~~t~~~~~~~~~~~--~~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~   78 (300)
T TIGR03866         2 KAYVSNEKDNTISVIDTATLEVTRTFPVGQ--RPRGITLSKDGKLLYVCASDSDTIQVIDLATGEVIGTLPSGP-DPELF   78 (300)
T ss_pred             cEEEEecCCCEEEEEECCCCceEEEEECCC--CCCceEECCCCCEEEEEECCCCeEEEEECCCCcEEEeccCCC-CccEE
Confidence            467788899999999999999999988765  56789999998754 666677999999999887765554433 35678


Q ss_pred             EECCCCCEEEE--ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCC-eEEEeecCccceeeeeecCC
Q psy10867         85 QASPDAAYIAV--SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDG-TICVWQLSRLICKQTVAFGI  161 (343)
Q Consensus        85 ~~s~~~~~l~~--~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg-~i~iwd~~~~~~~~~~~~~~  161 (343)
                      +|+|+++.+++  +.++.+++||+.+++.+..+.. ...+.+++|+|+++.+++++.++ .+.+||..+.......    
T Consensus        79 ~~~~~g~~l~~~~~~~~~l~~~d~~~~~~~~~~~~-~~~~~~~~~~~dg~~l~~~~~~~~~~~~~d~~~~~~~~~~----  153 (300)
T TIGR03866        79 ALHPNGKILYIANEDDNLVTVIDIETRKVLAEIPV-GVEPEGMAVSPDGKIVVNTSETTNMAHFIDTKTYEIVDNV----  153 (300)
T ss_pred             EECCCCCEEEEEcCCCCeEEEEECCCCeEEeEeeC-CCCcceEEECCCCCEEEEEecCCCeEEEEeCCCCeEEEEE----
Confidence            99999987764  3578999999998887777653 23468899999999999988765 4677898775432211    


Q ss_pred             CCCCCCccccccceeeeecccccceEEEEeecCCCceEE-EEeeCCCeEEEEecCCCceEEEeecC--------CcEEEE
Q psy10867        162 PGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRV-ASVSHDRTCKIFDLCTGEDLLSLILD--------TRLTCV  232 (343)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l-~~~~~d~~i~~wd~~~~~~~~~~~~~--------~~i~~~  232 (343)
                                        . ....+..++|+|++  .++ +++..++.+++||+++++.+..+...        .....+
T Consensus       154 ------------------~-~~~~~~~~~~s~dg--~~l~~~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i  212 (300)
T TIGR03866       154 ------------------L-VDQRPRFAEFTADG--KELWVSSEIGGTVSVIDVATRKVIKKITFEIPGVHPEAVQPVGI  212 (300)
T ss_pred             ------------------E-cCCCccEEEECCCC--CEEEEEcCCCCEEEEEEcCcceeeeeeeecccccccccCCccce
Confidence                              1 22345678999998  555 45556999999999998877665421        123568


Q ss_pred             EEcCCCCEEEEE-cCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEE-eCCCcEEEEeccc
Q psy10867        233 AFDGTEDNIYMG-TSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSS-SADETLKIWHTIS  310 (343)
Q Consensus       233 ~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~-~~dg~i~iwd~~~  310 (343)
                      +|+|++++++++ ..++.+.+||+++.+...           .+ .+...+.+++|+|+|++|+++ +.++.|++||+.+
T Consensus       213 ~~s~dg~~~~~~~~~~~~i~v~d~~~~~~~~-----------~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~i~v~d~~~  280 (300)
T TIGR03866       213 KLTKDGKTAFVALGPANRVAVVDAKTYEVLD-----------YL-LVGQRVWQLAFTPDEKYLLTTNGVSNDVSVIDVAA  280 (300)
T ss_pred             EECCCCCEEEEEcCCCCeEEEEECCCCcEEE-----------EE-EeCCCcceEEECCCCCEEEEEcCCCCeEEEEECCC
Confidence            899999986664 456789999987644321           11 234568899999999999876 5689999999999


Q ss_pred             ceeeeecccCCceEEEEEcc
Q psy10867        311 RQCLRTIQHKGPVLGAFLGL  330 (343)
Q Consensus       311 ~~~~~~~~~~~~v~~~~~sp  330 (343)
                      ++++.+++.....+.++++|
T Consensus       281 ~~~~~~~~~~~~~~~~~~~~  300 (300)
T TIGR03866       281 LKVIKSIKVGRLPWGVVVRP  300 (300)
T ss_pred             CcEEEEEEcccccceeEeCC
Confidence            99999999667779998876

Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.

>KOG0283|consensus

Probab=100.00  E-value=5.6e-33  Score=231.56  Aligned_cols=240  Identities=18%  Similarity=0.259  Sum_probs=197.7

Q ss_pred             eecc-cCCcceEEEEECCCCCEEEE-ecCCeEEEEEccC--------------------------------C--------
Q psy10867         72 QLRL-ICPGRISSMQASPDAAYIAV-SIETKLHMWQISS--------------------------------G--------  109 (343)
Q Consensus        72 ~~~~-~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~--------------------------------~--------  109 (343)
                      +... .|.+.|.++.||+||+|||+ |.|+.|+||.+..                                .        
T Consensus       260 Qe~~~ah~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~  339 (712)
T KOG0283|consen  260 QEISNAHKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSS  339 (712)
T ss_pred             eccccccCCcEEEEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCcccccccccccccccc
Confidence            3344 89999999999999999998 7999999998754                                0        


Q ss_pred             --------------------ceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCcc
Q psy10867        110 --------------------RLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGV  169 (343)
Q Consensus       110 --------------------~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~  169 (343)
                                          +++..+.+|.+.|..+.|+. .++|++++.|.+|++|++....++..+.           
T Consensus       340 ~~~~~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSK-n~fLLSSSMDKTVRLWh~~~~~CL~~F~-----------  407 (712)
T KOG0283|consen  340 RKGSQSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSK-NNFLLSSSMDKTVRLWHPGRKECLKVFS-----------  407 (712)
T ss_pred             ccccCCccccCCCccccccccchhhhhccchhheeccccc-CCeeEeccccccEEeecCCCcceeeEEe-----------
Confidence                                12334578999999999996 4689999999999999999987776664           


Q ss_pred             ccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcCCCc
Q psy10867        170 TGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGV  249 (343)
Q Consensus       170 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~  249 (343)
                                  |...|+|++|+|..+ +++++|+-|+.+|||++...+.+.-.....-|++++|.|+|++.++|+.+|.
T Consensus       408 ------------HndfVTcVaFnPvDD-ryFiSGSLD~KvRiWsI~d~~Vv~W~Dl~~lITAvcy~PdGk~avIGt~~G~  474 (712)
T KOG0283|consen  408 ------------HNDFVTCVAFNPVDD-RYFISGSLDGKVRLWSISDKKVVDWNDLRDLITAVCYSPDGKGAVIGTFNGY  474 (712)
T ss_pred             ------------cCCeeEEEEecccCC-CcEeecccccceEEeecCcCeeEeehhhhhhheeEEeccCCceEEEEEeccE
Confidence                        999999999999876 8999999999999999998888777778899999999999999999999999


Q ss_pred             EEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCC-CEEEEEeCCCcEEEEecccceeeeecc---cCCceEE
Q psy10867        250 IKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITG-ITLLSSSADETLKIWHTISRQCLRTIQ---HKGPVLG  325 (343)
Q Consensus       250 i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~---~~~~v~~  325 (343)
                      .++|+....+......+..... ... .|. .|+.+.|.|.. ..+++.+.|..|||+|.++.+++..|+   ....-..
T Consensus       475 C~fY~t~~lk~~~~~~I~~~~~-Kk~-~~~-rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~~~lv~KfKG~~n~~SQ~~  551 (712)
T KOG0283|consen  475 CRFYDTEGLKLVSDFHIRLHNK-KKK-QGK-RITGLQFFPGDPDEVLVTSNDSRIRIYDGRDKDLVHKFKGFRNTSSQIS  551 (712)
T ss_pred             EEEEEccCCeEEEeeeEeeccC-ccc-cCc-eeeeeEecCCCCCeEEEecCCCceEEEeccchhhhhhhcccccCCccee
Confidence            9999998765544333211111 111 233 89999999844 357788899999999998888888887   3344567


Q ss_pred             EEEccCCCeeeecc
Q psy10867        326 AFLGLLPPAIHDYD  339 (343)
Q Consensus       326 ~~~sp~~~~l~~~~  339 (343)
                      ..|+.||++|++++
T Consensus       552 Asfs~Dgk~IVs~s  565 (712)
T KOG0283|consen  552 ASFSSDGKHIVSAS  565 (712)
T ss_pred             eeEccCCCEEEEee
Confidence            89999999999987

>KOG0289|consensus

Probab=100.00  E-value=7.7e-32  Score=208.58  Aligned_cols=272  Identities=15%  Similarity=0.190  Sum_probs=231.3

Q ss_pred             cceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCCceEEEec
Q psy10867         38 SPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATAS  116 (343)
Q Consensus        38 ~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~  116 (343)
                      .+.++...|....+.+|+.|..+.++|...++.+.++.+|...|+.+.|+|+...+++ +.|..|+||............
T Consensus       221 gi~ald~~~s~~~ilTGG~d~~av~~d~~s~q~l~~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~~s~~~~~~  300 (506)
T KOG0289|consen  221 GITALDIIPSSSKILTGGEDKTAVLFDKPSNQILATLKGHTKKITSVKFHKDLDTVITASADEIIRVWSVPLSSEPTSSR  300 (506)
T ss_pred             CeeEEeecCCCCcceecCCCCceEEEecchhhhhhhccCcceEEEEEEeccchhheeecCCcceEEeeccccccCccccc
Confidence            6777888787667777777789999999999999999999999999999999887776 789999999998888888888


Q ss_pred             ccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCC
Q psy10867        117 SHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGA  196 (343)
Q Consensus       117 ~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  196 (343)
                      .|..+|+.+..+|.|.||++++.||...+.|++++.......                    -....-.+++.+|+||| 
T Consensus       301 ~h~~~V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~vs--------------------~~~s~v~~ts~~fHpDg-  359 (506)
T KOG0289|consen  301 PHEEPVTGLSLHPTGEYLLSASNDGTWAFSDISSGSQLTVVS--------------------DETSDVEYTSAAFHPDG-  359 (506)
T ss_pred             cccccceeeeeccCCcEEEEecCCceEEEEEccCCcEEEEEe--------------------eccccceeEEeeEcCCc-
Confidence            999999999999999999999999999999999986544321                    11233568999999999 


Q ss_pred             ceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCcc
Q psy10867        197 KSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDF  275 (343)
Q Consensus       197 ~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~  275 (343)
                       .++.+|..|+.+++||+.++..+..|. |.++|..++|+.+|-+|++++.|+.|++||++.......+.         +
T Consensus       360 -Lifgtgt~d~~vkiwdlks~~~~a~Fpght~~vk~i~FsENGY~Lat~add~~V~lwDLRKl~n~kt~~---------l  429 (506)
T KOG0289|consen  360 -LIFGTGTPDGVVKIWDLKSQTNVAKFPGHTGPVKAISFSENGYWLATAADDGSVKLWDLRKLKNFKTIQ---------L  429 (506)
T ss_pred             -eEEeccCCCceEEEEEcCCccccccCCCCCCceeEEEeccCceEEEEEecCCeEEEEEehhhcccceee---------c
Confidence             899999999999999999999888887 88999999999999999999999999999999876544321         1


Q ss_pred             ccccCcEEEEEEccCCCEEEEEeCCCcEEEEecc--cceeeeecc-cCCceEEEEEccCCCeeeecccC
Q psy10867        276 IGHEKQVTSLSCSITGITLLSSSADETLKIWHTI--SRQCLRTIQ-HKGPVLGAFLGLLPPAIHDYDFT  341 (343)
Q Consensus       276 ~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~--~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~~  341 (343)
                      . ....+.++.|.+.|.+|+.++.|=.|++++-.  +..++..+. |.+..+.+.|....+++++++..
T Consensus       430 ~-~~~~v~s~~fD~SGt~L~~~g~~l~Vy~~~k~~k~W~~~~~~~~~sg~st~v~Fg~~aq~l~s~smd  497 (506)
T KOG0289|consen  430 D-EKKEVNSLSFDQSGTYLGIAGSDLQVYICKKKTKSWTEIKELADHSGLSTGVRFGEHAQYLASTSMD  497 (506)
T ss_pred             c-ccccceeEEEcCCCCeEEeecceeEEEEEecccccceeeehhhhcccccceeeecccceEEeeccch
Confidence            1 23368999999999999999887666666532  566777777 88899999999999999998763

>PTZ00420 coronin; Provisional

Probab=100.00  E-value=3.1e-31  Score=223.85  Aligned_cols=242  Identities=14%  Similarity=0.158  Sum_probs=187.6

Q ss_pred             CCeEEEEecCCceEEEEEecCCCCcceEEEEeCC-ceEEEEEcCCCeEEEEeCCCcc--------cceecccCCcceEEE
Q psy10867         14 SGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGN-DYVLGVEKGKPMIQAWPVNSQE--------KAQLRLICPGRISSM   84 (343)
Q Consensus        14 dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~i~iw~~~~~~--------~~~~~~~~~~~v~~~   84 (343)
                      ++.|++|+......+..+.+|.. .|.+++|+|+ +.++++|+.|+.|+|||+.++.        .+..+.+|...|.++
T Consensus        53 ~gvI~L~~~~r~~~v~~L~gH~~-~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sV  131 (568)
T PTZ00420         53 IGAIRLENQMRKPPVIKLKGHTS-SILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISII  131 (568)
T ss_pred             eeEEEeeecCCCceEEEEcCCCC-CEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEEEE
Confidence            68899999888888899999999 9999999996 7889999999999999997642        123456899999999


Q ss_pred             EECCCCCEE-EE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCC
Q psy10867         85 QASPDAAYI-AV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIP  162 (343)
Q Consensus        85 ~~s~~~~~l-~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~  162 (343)
                      +|+|++..+ ++ +.|+.|++||+.+++.+..+. |...|.+++|+|+|.+|++++.|+.|++||++++..         
T Consensus       132 af~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~-~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~~---------  201 (568)
T PTZ00420        132 DWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQIN-MPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQEI---------  201 (568)
T ss_pred             EECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEe-cCCcEEEEEECCCCCEEEEEecCCEEEEEECCCCcE---------
Confidence            999998754 44 689999999999998777775 567899999999999999999999999999998743         


Q ss_pred             CCCCCccccccceeeeecccccceEEE-----EeecCCCceEEEEeeCCC----eEEEEecCC-CceEEEeecCCc---E
Q psy10867        163 GSSGKGVTGLTEPLHVKSQHSLPVTHV-----TLSKLGAKSRVASVSHDR----TCKIFDLCT-GEDLLSLILDTR---L  229 (343)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~v~~~-----~~~~~~~~~~l~~~~~d~----~i~~wd~~~-~~~~~~~~~~~~---i  229 (343)
                                   +..+.+|.+.+...     .|++++  .++++++.|+    +|++||+++ .+++....++..   +
T Consensus       202 -------------i~tl~gH~g~~~s~~v~~~~fs~d~--~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L  266 (568)
T PTZ00420        202 -------------ASSFHIHDGGKNTKNIWIDGLGGDD--NYILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNASAPL  266 (568)
T ss_pred             -------------EEEEecccCCceeEEEEeeeEcCCC--CEEEEEEcCCCCccEEEEEECCCCCCceEEEEecCCccce
Confidence                         34456777665433     344676  6888877664    799999995 566666554333   2


Q ss_pred             EEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCC
Q psy10867        230 TCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITG  291 (343)
Q Consensus       230 ~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~  291 (343)
                      ......+++.++++|..|+.|++|++..... ..        +..+. +..+..+++|.|+.
T Consensus       267 ~p~~D~~tg~l~lsGkGD~tIr~~e~~~~~~-~~--------l~~~~-s~~p~~g~~f~Pkr  318 (568)
T PTZ00420        267 IPHYDESTGLIYLIGKGDGNCRYYQHSLGSI-RK--------VNEYK-SCSPFRSFGFLPKQ  318 (568)
T ss_pred             EEeeeCCCCCEEEEEECCCeEEEEEccCCcE-Ee--------ecccc-cCCCccceEEcccc
Confidence            3333345688899999999999999975421 11        22232 56778889999964

>KOG0288|consensus

Probab=100.00  E-value=1.9e-33  Score=215.99  Aligned_cols=263  Identities=17%  Similarity=0.224  Sum_probs=218.5

Q ss_pred             eEEEecCCCCeEEEEecCCce--EEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEE
Q psy10867          6 EVAFSYDGSGAISVWEPKGGT--LLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISS   83 (343)
Q Consensus         6 ~~~~s~~~dg~i~iwd~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~   83 (343)
                      ..+++++.|..|++|++..++  .+.++.+..+ .++.+.|.++++.+.+++.|+.+++|++...+...++.+|.+.|++
T Consensus       188 dtlatgg~Dr~Ik~W~v~~~k~~~~~tLaGs~g-~it~~d~d~~~~~~iAas~d~~~r~Wnvd~~r~~~TLsGHtdkVt~  266 (459)
T KOG0288|consen  188 DTLATGGSDRIIKLWNVLGEKSELISTLAGSLG-NITSIDFDSDNKHVIAASNDKNLRLWNVDSLRLRHTLSGHTDKVTA  266 (459)
T ss_pred             chhhhcchhhhhhhhhcccchhhhhhhhhccCC-CcceeeecCCCceEEeecCCCceeeeeccchhhhhhhcccccceee
Confidence            345667778999999987665  6778888888 9999999999988888888899999999999999999999999999


Q ss_pred             EEECCCCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCC
Q psy10867         84 MQASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIP  162 (343)
Q Consensus        84 ~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~  162 (343)
                      +.|......+++ +.|.+|++||+....+..++-. ...+..|+.+  ...+++|..|++|++||.++......+     
T Consensus       267 ak~~~~~~~vVsgs~DRtiK~WDl~k~~C~kt~l~-~S~cnDI~~~--~~~~~SgH~DkkvRfwD~Rs~~~~~sv-----  338 (459)
T KOG0288|consen  267 AKFKLSHSRVVSGSADRTIKLWDLQKAYCSKTVLP-GSQCNDIVCS--ISDVISGHFDKKVRFWDIRSADKTRSV-----  338 (459)
T ss_pred             ehhhccccceeeccccchhhhhhhhhhheeccccc-cccccceEec--ceeeeecccccceEEEeccCCceeeEe-----
Confidence            999877665555 6899999999999888776542 3446666665  567899999999999999987544433     


Q ss_pred             CCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-----cCCcEEEEEEcCC
Q psy10867        163 GSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-----LDTRLTCVAFDGT  237 (343)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-----~~~~i~~~~~~~~  237 (343)
                                       ..+ +.|+++..++++  ..+++.+.|.++.+.|+++.+....+.     .....+.+.|+|+
T Consensus       339 -----------------~~g-g~vtSl~ls~~g--~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k~asDwtrvvfSpd  398 (459)
T KOG0288|consen  339 -----------------PLG-GRVTSLDLSMDG--LELLSSSRDDTLKVIDLRTKEIRQTFSAEGFKCASDWTRVVFSPD  398 (459)
T ss_pred             -----------------ecC-cceeeEeeccCC--eEEeeecCCCceeeeecccccEEEEeeccccccccccceeEECCC
Confidence                             333 489999999999  788888999999999999998887775     2455899999999


Q ss_pred             CCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEE
Q psy10867        238 EDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIW  306 (343)
Q Consensus       238 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw  306 (343)
                      +.|+++|+.||.|+||++.+.+.....         ........|++++|+|.|..|++++.++.+.+|
T Consensus       399 ~~YvaAGS~dgsv~iW~v~tgKlE~~l---------~~s~s~~aI~s~~W~~sG~~Llsadk~~~v~lW  458 (459)
T KOG0288|consen  399 GSYVAAGSADGSVYIWSVFTGKLEKVL---------SLSTSNAAITSLSWNPSGSGLLSADKQKAVTLW  458 (459)
T ss_pred             CceeeeccCCCcEEEEEccCceEEEEe---------ccCCCCcceEEEEEcCCCchhhcccCCcceEec
Confidence            999999999999999999986654321         222223369999999999999999999999999

>KOG0274|consensus

Probab=100.00  E-value=1.9e-31  Score=224.31  Aligned_cols=249  Identities=25%  Similarity=0.351  Sum_probs=216.4

Q ss_pred             cceEEEEeCCceEEEEEcCCCeEEEEeCCCccccee-cccCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCCceEEEe
Q psy10867         38 SPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQL-RLICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATA  115 (343)
Q Consensus        38 ~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~-~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~  115 (343)
                      .+.+..|.  ..++.+++.+++|++|+..++..+.. +.+|.+.|.+++|..-+.+|++ +.|.++++||..+|++...+
T Consensus       210 ~~~~~q~~--~~~~~~~s~~~tl~~~~~~~~~~i~~~l~GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~sg~C~~~l  287 (537)
T KOG0274|consen  210 VVLCLQLH--DGFFKSGSDDSTLHLWDLNNGYLILTRLVGHFGGVWGLAFPSGGDKLVSGSTDKTERVWDCSTGECTHSL  287 (537)
T ss_pred             hhhhheee--cCeEEecCCCceeEEeecccceEEEeeccCCCCCceeEEEecCCCEEEEEecCCcEEeEecCCCcEEEEe
Confidence            77888887  44556666669999999999998877 8899999999999876677776 56999999999999999999


Q ss_pred             cccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCC
Q psy10867        116 SSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLG  195 (343)
Q Consensus       116 ~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  195 (343)
                      .+|.+.|.++...  ...+++|+.|.+|++|++.++.                      .+..+.+|..+|.++..+  +
T Consensus       288 ~gh~stv~~~~~~--~~~~~sgs~D~tVkVW~v~n~~----------------------~l~l~~~h~~~V~~v~~~--~  341 (537)
T KOG0274|consen  288 QGHTSSVRCLTID--PFLLVSGSRDNTVKVWDVTNGA----------------------CLNLLRGHTGPVNCVQLD--E  341 (537)
T ss_pred             cCCCceEEEEEcc--CceEeeccCCceEEEEeccCcc----------------------eEEEeccccccEEEEEec--C
Confidence            9999999998874  4678889999999999999764                      455566799999999998  3


Q ss_pred             CceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCc
Q psy10867        196 AKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPD  274 (343)
Q Consensus       196 ~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~  274 (343)
                        .++++|+.|++|++||+.+++++..+. |...|.++.+.+. ..+++|+.|+.|++||+++..          +++..
T Consensus       342 --~~lvsgs~d~~v~VW~~~~~~cl~sl~gH~~~V~sl~~~~~-~~~~Sgs~D~~IkvWdl~~~~----------~c~~t  408 (537)
T KOG0274|consen  342 --PLLVSGSYDGTVKVWDPRTGKCLKSLSGHTGRVYSLIVDSE-NRLLSGSLDTTIKVWDLRTKR----------KCIHT  408 (537)
T ss_pred             --CEEEEEecCceEEEEEhhhceeeeeecCCcceEEEEEecCc-ceEEeeeeccceEeecCCchh----------hhhhh
Confidence              689999999999999999999999998 8889999988876 899999999999999999862          33778


Q ss_pred             cccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc--cCCceEEEEEc
Q psy10867        275 FIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ--HKGPVLGAFLG  329 (343)
Q Consensus       275 ~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~--~~~~v~~~~~s  329 (343)
                      +.+|..-+..+.+  .+++|++++.|+.|++||..+++++.++.  +.+.|..+++.
T Consensus       409 l~~h~~~v~~l~~--~~~~Lvs~~aD~~Ik~WD~~~~~~~~~~~~~~~~~v~~l~~~  463 (537)
T KOG0274|consen  409 LQGHTSLVSSLLL--RDNFLVSSSADGTIKLWDAEEGECLRTLEGRHVGGVSALALG  463 (537)
T ss_pred             hcCCccccccccc--ccceeEeccccccEEEeecccCceeeeeccCCcccEEEeecC
Confidence            8899988876654  56799999999999999999999999998  35788888877

>KOG0973|consensus

Probab=100.00  E-value=9.9e-32  Score=229.85  Aligned_cols=269  Identities=16%  Similarity=0.234  Sum_probs=215.6

Q ss_pred             CCeEEEEecCC------------ceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCC--------------
Q psy10867         14 SGAISVWEPKG------------GTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNS--------------   67 (343)
Q Consensus        14 dg~i~iwd~~~------------~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~--------------   67 (343)
                      ||.++||+.+.            .+.+.+...|.+ .|.|+.|+|||.++|+|++|+.|.||....              
T Consensus        36 d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~-sv~CVR~S~dG~~lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~  114 (942)
T KOG0973|consen   36 DGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDG-SVNCVRFSPDGSYLASGSDDRLVMIWERAEIGSGTVFGSTGGAK  114 (942)
T ss_pred             cccceeeccccccchhhhhhcccchhheeeccccC-ceeEEEECCCCCeEeeccCcceEEEeeecccCCccccccccccc
Confidence            77888998753            234667788999 999999999999999999999999998762              


Q ss_pred             ----cccceecccCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCe
Q psy10867         68 ----QEKAQLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGT  142 (343)
Q Consensus        68 ----~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~  142 (343)
                          .+....+.+|...|..++|+|++.+|++ +.|++|.+|+..+.+.+..+++|.+.|..+.|.|-|++|++-+.|++
T Consensus       115 ~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~tF~~~~vl~~H~s~VKGvs~DP~Gky~ASqsdDrt  194 (942)
T KOG0973|consen  115 NVESWKVVSILRGHDSDVLDVNWSPDDSLLVSVSLDNSVIIWNAKTFELLKVLRGHQSLVKGVSWDPIGKYFASQSDDRT  194 (942)
T ss_pred             ccceeeEEEEEecCCCccceeccCCCccEEEEecccceEEEEccccceeeeeeecccccccceEECCccCeeeeecCCce
Confidence                1234556799999999999999999998 78999999999999999999999999999999999999999999999


Q ss_pred             EEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeC----CCeEEEEecCCCc
Q psy10867        143 ICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSH----DRTCKIFDLCTGE  218 (343)
Q Consensus       143 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~----d~~i~~wd~~~~~  218 (343)
                      |++|++.+-.....+.               ++. ....-...+..+.|+|+|  ++|++.-.    -..+.|.+-.+.+
T Consensus       195 ikvwrt~dw~i~k~It---------------~pf-~~~~~~T~f~RlSWSPDG--~~las~nA~n~~~~~~~IieR~tWk  256 (942)
T KOG0973|consen  195 LKVWRTSDWGIEKSIT---------------KPF-EESPLTTFFLRLSWSPDG--HHLASPNAVNGGKSTIAIIERGTWK  256 (942)
T ss_pred             EEEEEcccceeeEeec---------------cch-hhCCCcceeeecccCCCc--CeecchhhccCCcceeEEEecCCce
Confidence            9999977754444332               011 111234567889999999  78887533    3568888876666


Q ss_pred             eEEEee-cCCcEEEEEEcCC-----CC------------EEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccC
Q psy10867        219 DLLSLI-LDTRLTCVAFDGT-----ED------------NIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEK  280 (343)
Q Consensus       219 ~~~~~~-~~~~i~~~~~~~~-----~~------------~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (343)
                      .-..+- |..++.++.|+|.     .+            .+|+|+.|+.|.||..........          ...-...
T Consensus       257 ~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~~RPl~v----------i~~lf~~  326 (942)
T KOG0973|consen  257 VDKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNTALPRPLFV----------IHNLFNK  326 (942)
T ss_pred             eeeeeecCCCceEEEEeChHHhccccccCCccCCCcceEEEEEecCCccEEEEecCCCCchhh----------hhhhhcC
Confidence            544444 8899999999982     11            578899999999999865433321          1222457


Q ss_pred             cEEEEEEccCCCEEEEEeCCCcEEEEecccc
Q psy10867        281 QVTSLSCSITGITLLSSSADETLKIWHTISR  311 (343)
Q Consensus       281 ~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~  311 (343)
                      .|..++|+|||..|+.+|.||+|.+..++..
T Consensus       327 SI~DmsWspdG~~LfacS~DGtV~~i~Fee~  357 (942)
T KOG0973|consen  327 SIVDMSWSPDGFSLFACSLDGTVALIHFEEK  357 (942)
T ss_pred             ceeeeeEcCCCCeEEEEecCCeEEEEEcchH
Confidence            8999999999999999999999999998754

>KOG0640|consensus

Probab=100.00  E-value=1.1e-31  Score=199.58  Aligned_cols=269  Identities=17%  Similarity=0.281  Sum_probs=220.2

Q ss_pred             eEEEecCCCCeEEEEecCC------------c------eEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCC
Q psy10867          6 EVAFSYDGSGAISVWEPKG------------G------TLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNS   67 (343)
Q Consensus         6 ~~~~s~~~dg~i~iwd~~~------------~------~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~   67 (343)
                      .++.+++.|..|+|.|++.            |      -.++++-.|.+ .|+++.|+|...++++++.|++|++||...
T Consensus       125 ~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~d-evn~l~FHPre~ILiS~srD~tvKlFDfsK  203 (430)
T KOG0640|consen  125 SLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVD-EVNDLDFHPRETILISGSRDNTVKLFDFSK  203 (430)
T ss_pred             cEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccC-cccceeecchhheEEeccCCCeEEEEeccc
Confidence            3444555589999999872            1      23667788888 999999999999999999999999999876


Q ss_pred             cccceec--ccCCcceEEEEECCCCCEEEEecCC-eEEEEEccCCceEEEe---cccCCCeEEEEEecCCCEEEEecCCC
Q psy10867         68 QEKAQLR--LICPGRISSMQASPDAAYIAVSIET-KLHMWQISSGRLLATA---SSHYQPITIVKWSADSNFIVTGGEDG  141 (343)
Q Consensus        68 ~~~~~~~--~~~~~~v~~~~~s~~~~~l~~~~d~-~i~v~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~s~~~dg  141 (343)
                      ....+.+  .....+|.++.|+|.|.+|+++.|. .+++||+++-++....   .+|.+.|+++.+++.+++.++++.||
T Consensus       204 ~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T~QcfvsanPd~qht~ai~~V~Ys~t~~lYvTaSkDG  283 (430)
T KOG0640|consen  204 TSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNTYQCFVSANPDDQHTGAITQVRYSSTGSLYVTASKDG  283 (430)
T ss_pred             HHHHHHHHHhhccceeeeEeecCCCceEEEecCCCceeEEeccceeEeeecCcccccccceeEEEecCCccEEEEeccCC
Confidence            5443222  2456789999999999999997665 8999999998776544   36899999999999999999999999


Q ss_pred             eEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccc-cceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceE
Q psy10867        142 TICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHS-LPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDL  220 (343)
Q Consensus       142 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~  220 (343)
                      .|++||--+++++.++.                     ..|. ..|.+..|..++  +++++.+.|..+++|.+.+++.+
T Consensus       284 ~IklwDGVS~rCv~t~~---------------------~AH~gsevcSa~Ftkn~--kyiLsSG~DS~vkLWEi~t~R~l  340 (430)
T KOG0640|consen  284 AIKLWDGVSNRCVRTIG---------------------NAHGGSEVCSAVFTKNG--KYILSSGKDSTVKLWEISTGRML  340 (430)
T ss_pred             cEEeeccccHHHHHHHH---------------------hhcCCceeeeEEEccCC--eEEeecCCcceeeeeeecCCceE
Confidence            99999998888776553                     2343 568899999999  89999999999999999999999


Q ss_pred             EEeecCC------cEEEEEEcCCCCEEEEEc-CCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCE
Q psy10867        221 LSLILDT------RLTCVAFDGTEDNIYMGT-SEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGIT  293 (343)
Q Consensus       221 ~~~~~~~------~i~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~  293 (343)
                      ..+...+      --+...|+..+.+++.-. ..+.+.-||.++..+....          -.+|++.+..+.-||.+.-
T Consensus       341 ~~YtGAg~tgrq~~rtqAvFNhtEdyVl~pDEas~slcsWdaRtadr~~l~----------slgHn~a~R~i~HSP~~p~  410 (430)
T KOG0640|consen  341 KEYTGAGTTGRQKHRTQAVFNHTEDYVLFPDEASNSLCSWDARTADRVALL----------SLGHNGAVRWIVHSPVEPA  410 (430)
T ss_pred             EEEecCCcccchhhhhhhhhcCccceEEccccccCceeeccccchhhhhhc----------ccCCCCCceEEEeCCCCCc
Confidence            9886421      134566888888777654 3678999999987665432          3479999999999999999


Q ss_pred             EEEEeCCCcEEEEec
Q psy10867        294 LLSSSADETLKIWHT  308 (343)
Q Consensus       294 l~s~~~dg~i~iwd~  308 (343)
                      +++|+.|..+|+|--
T Consensus       411 FmTcsdD~raRFWyr  425 (430)
T KOG0640|consen  411 FMTCSDDFRARFWYR  425 (430)
T ss_pred             eeeecccceeeeeee
Confidence            999999999999964

>KOG0641|consensus

Probab=100.00  E-value=4.7e-30  Score=182.84  Aligned_cols=275  Identities=16%  Similarity=0.131  Sum_probs=216.7

Q ss_pred             EEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCC------Ccc-----c---c-eecccCCcceEEEEECCCCCE
Q psy10867         28 LMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVN------SQE-----K---A-QLRLICPGRISSMQASPDAAY   92 (343)
Q Consensus        28 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~------~~~-----~---~-~~~~~~~~~v~~~~~s~~~~~   92 (343)
                      +..++...  .|++++|+|.|.+.+.|++..+++|-...      .+.     +   . +....|.+.|.|.+|+|+|++
T Consensus        26 i~~l~dsq--airav~fhp~g~lyavgsnskt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc~~ws~~gel  103 (350)
T KOG0641|consen   26 INILEDSQ--AIRAVAFHPAGGLYAVGSNSKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYCTAWSPCGEL  103 (350)
T ss_pred             EEEecchh--heeeEEecCCCceEEeccCCceEEEEccccccCcccccccccCCCeEEeeeccccCccEEEEEecCccCe
Confidence            34444433  89999999999999999998888876432      111     1   0 223478899999999999999


Q ss_pred             EEE-ecCCeEEEEEccCCce-----EEEecccCCCeEEEEEecC----CCEEEEecC-CCeEEEeecCccceeeeeecCC
Q psy10867         93 IAV-SIETKLHMWQISSGRL-----LATASSHYQPITIVKWSAD----SNFIVTGGE-DGTICVWQLSRLICKQTVAFGI  161 (343)
Q Consensus        93 l~~-~~d~~i~v~~~~~~~~-----~~~~~~~~~~v~~~~~~~~----~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~  161 (343)
                      +++ +.|.+|++...+...+     -..+.-|.+.|..++|..+    +..|++++. |..|++-|...++         
T Consensus       104 iatgsndk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc~iy~tdc~~g~---------  174 (350)
T KOG0641|consen  104 IATGSNDKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDCKIYITDCGRGQ---------  174 (350)
T ss_pred             EEecCCCceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCcceEEEeecCCCC---------
Confidence            998 5788999987764432     2356679999999999653    456777654 6677777877763         


Q ss_pred             CCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee---c-----CCcEEEEE
Q psy10867        162 PGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI---L-----DTRLTCVA  233 (343)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~---~-----~~~i~~~~  233 (343)
                                   ..+.+.+|.+.|.++- +.++  -.+++|+.|.+|++||++-..++..+.   +     .+.|.+++
T Consensus       175 -------------~~~a~sghtghilaly-swn~--~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~  238 (350)
T KOG0641|consen  175 -------------GFHALSGHTGHILALY-SWNG--AMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVA  238 (350)
T ss_pred             -------------cceeecCCcccEEEEE-EecC--cEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEE
Confidence                         6677789999988763 4445  689999999999999999888888775   2     25699999


Q ss_pred             EcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccc--
Q psy10867        234 FDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISR--  311 (343)
Q Consensus       234 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~--  311 (343)
                      ..|.|++|++|..|..-.+||++....           ++.+..|...|.++.|+|...|+++++.|..|++-|+...  
T Consensus       239 vdpsgrll~sg~~dssc~lydirg~r~-----------iq~f~phsadir~vrfsp~a~yllt~syd~~ikltdlqgdla  307 (350)
T KOG0641|consen  239 VDPSGRLLASGHADSSCMLYDIRGGRM-----------IQRFHPHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQGDLA  307 (350)
T ss_pred             ECCCcceeeeccCCCceEEEEeeCCce-----------eeeeCCCccceeEEEeCCCceEEEEecccceEEEeecccchh
Confidence            999999999999999999999998544           6678899999999999999999999999999999998632  


Q ss_pred             ee--eeec-ccCCceEEEEEccCCCeeeeccc
Q psy10867        312 QC--LRTI-QHKGPVLGAFLGLLPPAIHDYDF  340 (343)
Q Consensus       312 ~~--~~~~-~~~~~v~~~~~sp~~~~l~~~~~  340 (343)
                      +.  +... +|+..+..+.|+|..-.+++.+.
T Consensus       308 ~el~~~vv~ehkdk~i~~rwh~~d~sfisssa  339 (350)
T KOG0641|consen  308 HELPIMVVAEHKDKAIQCRWHPQDFSFISSSA  339 (350)
T ss_pred             hcCceEEEEeccCceEEEEecCccceeeeccC
Confidence            11  1122 28899999999999988887764

>KOG0305|consensus

Probab=100.00  E-value=1.5e-31  Score=217.18  Aligned_cols=262  Identities=20%  Similarity=0.240  Sum_probs=220.3

Q ss_pred             eEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEEe-cCCeEEEEEccCCceEEEecc-
Q psy10867         40 HSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVS-IETKLHMWQISSGRLLATASS-  117 (343)
Q Consensus        40 ~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~d~~i~v~~~~~~~~~~~~~~-  117 (343)
                      .-+.|+. ...++.+.. ..|.+|+..+++.......+...|+++.|+++|.+||++ .+|.|.|||..+.+.+..+.+ 
T Consensus       181 nlldWss-~n~laValg-~~vylW~~~s~~v~~l~~~~~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k~~~~~~~~  258 (484)
T KOG0305|consen  181 NLLDWSS-ANVLAVALG-QSVYLWSASSGSVTELCSFGEELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQKKTRTLRGS  258 (484)
T ss_pred             hHhhccc-CCeEEEEec-ceEEEEecCCCceEEeEecCCCceEEEEECCCCCEEEEeecCCeEEEEehhhccccccccCC
Confidence            3456663 456666666 589999999998666555558899999999999999985 789999999999999999988 


Q ss_pred             cCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCc
Q psy10867        118 HYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAK  197 (343)
Q Consensus       118 ~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  197 (343)
                      |...|-+++|.  +..+.+|+.|+.|..+|++..+..                     ...+.+|...|..+.|++++  
T Consensus       259 h~~rvg~laW~--~~~lssGsr~~~I~~~dvR~~~~~---------------------~~~~~~H~qeVCgLkws~d~--  313 (484)
T KOG0305|consen  259 HASRVGSLAWN--SSVLSSGSRDGKILNHDVRISQHV---------------------VSTLQGHRQEVCGLKWSPDG--  313 (484)
T ss_pred             cCceeEEEecc--CceEEEecCCCcEEEEEEecchhh---------------------hhhhhcccceeeeeEECCCC--
Confidence            99999999997  778999999999999999986432                     22367899999999999999  


Q ss_pred             eEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCC-CCEEEEE--cCCCcEEEEEeecccccccccccCCCCCC
Q psy10867        198 SRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGT-EDNIYMG--TSEGVIKSFCLRQVPRTRDHHIQDSTSNP  273 (343)
Q Consensus       198 ~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~-~~~l~~~--~~d~~i~i~d~~~~~~~~~~~~~~~~~~~  273 (343)
                      .++++|+.|+.+.|||....+++..+. |...|..++|+|- ...||+|  +.|+.|++||..+.......         
T Consensus       314 ~~lASGgnDN~~~Iwd~~~~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~~v---------  384 (484)
T KOG0305|consen  314 NQLASGGNDNVVFIWDGLSPEPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGARIDSV---------  384 (484)
T ss_pred             CeeccCCCccceEeccCCCccccEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCcEeccc---------
Confidence            899999999999999997777776665 8999999999995 4577775  56999999999976554322         


Q ss_pred             ccccccCcEEEEEEccCCCEEEEE--eCCCcEEEEecccceeeeecc-cCCceEEEEEccCCCeeeeccc
Q psy10867        274 DFIGHEKQVTSLSCSITGITLLSS--SADETLKIWHTISRQCLRTIQ-HKGPVLGAFLGLLPPAIHDYDF  340 (343)
Q Consensus       274 ~~~~~~~~v~~~~~s~~~~~l~s~--~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~  340 (343)
                         .....|.+|.|++..+-|+++  -.++.|.||+..+.+.+..+. |...|..++++|||..+++++.
T Consensus       385 ---dtgsQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ps~~~~~~l~gH~~RVl~la~SPdg~~i~t~a~  451 (484)
T KOG0305|consen  385 ---DTGSQVCSLIWSKKYKELLSTHGYSENQITLWKYPSMKLVAELLGHTSRVLYLALSPDGETIVTGAA  451 (484)
T ss_pred             ---ccCCceeeEEEcCCCCEEEEecCCCCCcEEEEeccccceeeeecCCcceeEEEEECCCCCEEEEecc
Confidence               245789999999998766654  456789999999999999888 9999999999999999999874

>KOG1446|consensus

Probab=100.00  E-value=2e-30  Score=193.19  Aligned_cols=272  Identities=13%  Similarity=0.194  Sum_probs=215.0

Q ss_pred             ccceEEEecCC--------CCeEEEEecCCceEEEEEecCCCCcceEEEEeCCc-eEEEEEc-CCCeEEEEeCCCcccce
Q psy10867          3 LLNEVAFSYDG--------SGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGND-YVLGVEK-GKPMIQAWPVNSQEKAQ   72 (343)
Q Consensus         3 ~v~~~~~s~~~--------dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~-~~~~i~iw~~~~~~~~~   72 (343)
                      +|+++.|+.+|        |..++|||..++++++++..++- .+..++|.... .++.++. .|.+|+..++.+.+.++
T Consensus        16 ~i~sl~fs~~G~~litss~dDsl~LYd~~~g~~~~ti~skky-G~~~~~Fth~~~~~i~sStk~d~tIryLsl~dNkylR   94 (311)
T KOG1446|consen   16 KINSLDFSDDGLLLITSSEDDSLRLYDSLSGKQVKTINSKKY-GVDLACFTHHSNTVIHSSTKEDDTIRYLSLHDNKYLR   94 (311)
T ss_pred             ceeEEEecCCCCEEEEecCCCeEEEEEcCCCceeeEeecccc-cccEEEEecCCceEEEccCCCCCceEEEEeecCceEE
Confidence            45555555555        78999999999999999999887 88999998654 4443333 36799999999999999


Q ss_pred             ecccCCcceEEEEECCCCCEEE-EecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCcc
Q psy10867         73 LRLICPGRISSMQASPDAAYIA-VSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRL  151 (343)
Q Consensus        73 ~~~~~~~~v~~~~~s~~~~~l~-~~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~  151 (343)
                      .+.+|...|+.++.+|-+..+. ++.|++|++||++..++...+.....  ..++|.|+|-++|++.....|++||++..
T Consensus        95 YF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~~~~--pi~AfDp~GLifA~~~~~~~IkLyD~Rs~  172 (311)
T KOG1446|consen   95 YFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLLNLSGR--PIAAFDPEGLIFALANGSELIKLYDLRSF  172 (311)
T ss_pred             EcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEEecCCC--cceeECCCCcEEEEecCCCeEEEEEeccc
Confidence            9999999999999999666555 58899999999998888777754333  45889999999999998889999999875


Q ss_pred             ceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCC----
Q psy10867        152 ICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDT----  227 (343)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~----  227 (343)
                      ......                 ......+.....+.+.|+|+|  +.++.++..+.+++.|.-+|..+.++....    
T Consensus       173 dkgPF~-----------------tf~i~~~~~~ew~~l~FS~dG--K~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~~~~  233 (311)
T KOG1446|consen  173 DKGPFT-----------------TFSITDNDEAEWTDLEFSPDG--KSILLSTNASFIYLLDAFDGTVKSTFSGYPNAGN  233 (311)
T ss_pred             CCCCce-----------------eEccCCCCccceeeeEEcCCC--CEEEEEeCCCcEEEEEccCCcEeeeEeeccCCCC
Confidence            321110                 111112456778999999999  899999999999999999999888887321    


Q ss_pred             cEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCcccc-ccCcEEEEEEccCCCEEEEEeCCCcEEEE
Q psy10867        228 RLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIG-HEKQVTSLSCSITGITLLSSSADETLKIW  306 (343)
Q Consensus       228 ~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~~~dg~i~iw  306 (343)
                      -.-..+|+||++++++|+.||+|.+|+++++..           +..+.+ +..++.++.|+|.-..+++++.  .+.+|
T Consensus       234 ~~~~a~ftPds~Fvl~gs~dg~i~vw~~~tg~~-----------v~~~~~~~~~~~~~~~fnP~~~mf~sa~s--~l~fw  300 (311)
T KOG1446|consen  234 LPLSATFTPDSKFVLSGSDDGTIHVWNLETGKK-----------VAVLRGPNGGPVSCVRFNPRYAMFVSASS--NLVFW  300 (311)
T ss_pred             cceeEEECCCCcEEEEecCCCcEEEEEcCCCcE-----------eeEecCCCCCCccccccCCceeeeeecCc--eEEEE
Confidence            235788999999999999999999999987655           344555 6788999999998777777654  67777


Q ss_pred             ecc
Q psy10867        307 HTI  309 (343)
Q Consensus       307 d~~  309 (343)
                      =..
T Consensus       301 ~p~  303 (311)
T KOG1446|consen  301 LPD  303 (311)
T ss_pred             ecc
Confidence            654

>KOG0268|consensus

Probab=100.00  E-value=7.6e-33  Score=209.49  Aligned_cols=268  Identities=13%  Similarity=0.222  Sum_probs=213.4

Q ss_pred             eEEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEE
Q psy10867          6 EVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQ   85 (343)
Q Consensus         6 ~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~   85 (343)
                      ..++|++.||.|+|||+.+.+++.+++.|.+ .|..+++.. +.++.+|.+ .+|+.|.++.. ..+.+ .....+..+.
T Consensus        80 s~~aSGs~DG~VkiWnlsqR~~~~~f~AH~G-~V~Gi~v~~-~~~~tvgdD-KtvK~wk~~~~-p~~ti-lg~s~~~gId  154 (433)
T KOG0268|consen   80 STVASGSCDGEVKIWNLSQRECIRTFKAHEG-LVRGICVTQ-TSFFTVGDD-KTVKQWKIDGP-PLHTI-LGKSVYLGID  154 (433)
T ss_pred             hhhhccccCceEEEEehhhhhhhheeecccC-ceeeEEecc-cceEEecCC-cceeeeeccCC-cceee-eccccccccc
Confidence            3468899999999999999999999999999 999999987 666666666 89999998763 34433 2345566776


Q ss_pred             ECCCCCEEEEecCCeEEEEEccCCceEEEecccCCCeEEEEEecC-CCEEEEecCCCeEEEeecCccceeeeeecCCCCC
Q psy10867         86 ASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSAD-SNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGS  164 (343)
Q Consensus        86 ~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~  164 (343)
                      -+..+..+|++ ...|.|||..-..+++.+.-....|.++.|+|. ...|++++.|+.|.+||++...++..+.      
T Consensus       155 h~~~~~~FaTc-Ge~i~IWD~~R~~Pv~smswG~Dti~svkfNpvETsILas~~sDrsIvLyD~R~~~Pl~KVi------  227 (433)
T KOG0268|consen  155 HHRKNSVFATC-GEQIDIWDEQRDNPVSSMSWGADSISSVKFNPVETSILASCASDRSIVLYDLRQASPLKKVI------  227 (433)
T ss_pred             ccccccccccc-CceeeecccccCCccceeecCCCceeEEecCCCcchheeeeccCCceEEEecccCCccceee------
Confidence            66566666664 346999999988999999888888999999994 4577888899999999999986655432      


Q ss_pred             CCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCce-EEEee-cCCcEEEEEEcCCCCEEE
Q psy10867        165 SGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGED-LLSLI-LDTRLTCVAFDGTEDNIY  242 (343)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~-~~~~~-~~~~i~~~~~~~~~~~l~  242 (343)
                                       -...-+.|+|+|..  ..+++|++|..++.||++..+. +..+. |.+.+.++.|+|.|+.++
T Consensus       228 -----------------~~mRTN~IswnPea--fnF~~a~ED~nlY~~DmR~l~~p~~v~~dhvsAV~dVdfsptG~Efv  288 (433)
T KOG0268|consen  228 -----------------LTMRTNTICWNPEA--FNFVAANEDHNLYTYDMRNLSRPLNVHKDHVSAVMDVDFSPTGQEFV  288 (433)
T ss_pred             -----------------eeccccceecCccc--cceeeccccccceehhhhhhcccchhhcccceeEEEeccCCCcchhc
Confidence                             23345689999976  7899999999999999987654 33333 778899999999999999


Q ss_pred             EEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceee
Q psy10867        243 MGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCL  314 (343)
Q Consensus       243 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~  314 (343)
                      +|+.|.+|+||..+.......++          ..--+.|.++.||.|.+++++||.|+.|++|.....+.+
T Consensus       289 sgsyDksIRIf~~~~~~SRdiYh----------tkRMq~V~~Vk~S~Dskyi~SGSdd~nvRlWka~Asekl  350 (433)
T KOG0268|consen  289 SGSYDKSIRIFPVNHGHSRDIYH----------TKRMQHVFCVKYSMDSKYIISGSDDGNVRLWKAKASEKL  350 (433)
T ss_pred             cccccceEEEeecCCCcchhhhh----------HhhhheeeEEEEeccccEEEecCCCcceeeeecchhhhc
Confidence            99999999999988754332211          011256999999999999999999999999987654443

>KOG1407|consensus

Probab=100.00  E-value=6.4e-32  Score=195.83  Aligned_cols=233  Identities=15%  Similarity=0.230  Sum_probs=203.0

Q ss_pred             eecccCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCCceEE--EecccCCCeEEEEEec-CCCEEEEecCCCeEEEee
Q psy10867         72 QLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGRLLA--TASSHYQPITIVKWSA-DSNFIVTGGEDGTICVWQ  147 (343)
Q Consensus        72 ~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~--~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd  147 (343)
                      +.+.+|...+.+++|+.+|..|++ +.|+++.+|+++..+...  ...+|.+.|-.++|+| ....+++++.|.+|++||
T Consensus        14 r~~~~~~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~ir~wd   93 (313)
T KOG1407|consen   14 RELQGHVQKVHSVAWNCDGTKLASGSFDKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKTIRIWD   93 (313)
T ss_pred             HHhhhhhhcceEEEEcccCceeeecccCCceEEEEecchhhhhhhcccCCCcchhhheeCCCCCcceEEecCCceEEEEE
Confidence            345588899999999999999998 679999999998775544  3468999999999988 667999999999999999


Q ss_pred             cCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCC
Q psy10867        148 LSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDT  227 (343)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~  227 (343)
                      ++..++...+.                       ....-.-+.|+|++  .+++.+..|..|.+.|.++.+.....+...
T Consensus        94 ~r~~k~~~~i~-----------------------~~~eni~i~wsp~g--~~~~~~~kdD~it~id~r~~~~~~~~~~~~  148 (313)
T KOG1407|consen   94 IRSGKCTARIE-----------------------TKGENINITWSPDG--EYIAVGNKDDRITFIDARTYKIVNEEQFKF  148 (313)
T ss_pred             eccCcEEEEee-----------------------ccCcceEEEEcCCC--CEEEEecCcccEEEEEecccceeehhcccc
Confidence            99987655432                       23334468899999  899999999999999999999998888888


Q ss_pred             cEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEe
Q psy10867        228 RLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWH  307 (343)
Q Consensus       228 ~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd  307 (343)
                      .+..++|+.++.+++.....|.|.|......           +++..+++|...-.|+.|+|+|+++|+|+.|..+-+||
T Consensus       149 e~ne~~w~~~nd~Fflt~GlG~v~ILsypsL-----------kpv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD  217 (313)
T KOG1407|consen  149 EVNEISWNNSNDLFFLTNGLGCVEILSYPSL-----------KPVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWD  217 (313)
T ss_pred             eeeeeeecCCCCEEEEecCCceEEEEecccc-----------ccccccccCCcceEEEEECCCCceEeeccccceeeccC
Confidence            8999999988888888888899999887653           33778899999999999999999999999999999999


Q ss_pred             cccceeeeecc-cCCceEEEEEccCCCeeeeccc
Q psy10867        308 TISRQCLRTIQ-HKGPVLGAFLGLLPPAIHDYDF  340 (343)
Q Consensus       308 ~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~  340 (343)
                      +...-+++.+. +.-+|+.+.||.||++|++++-
T Consensus       218 ~~ELiC~R~isRldwpVRTlSFS~dg~~lASaSE  251 (313)
T KOG1407|consen  218 VDELICERCISRLDWPVRTLSFSHDGRMLASASE  251 (313)
T ss_pred             hhHhhhheeeccccCceEEEEeccCcceeeccCc
Confidence            99999999998 8999999999999999999873

>KOG2096|consensus

Probab=100.00  E-value=5.3e-31  Score=196.52  Aligned_cols=295  Identities=15%  Similarity=0.195  Sum_probs=215.6

Q ss_pred             EEEEecCCceE-----EEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccc--eecc--cCCcceEEEEEC
Q psy10867         17 ISVWEPKGGTL-----LMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKA--QLRL--ICPGRISSMQAS   87 (343)
Q Consensus        17 i~iwd~~~~~~-----~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~--~~~~--~~~~~v~~~~~s   87 (343)
                      ..-|+....+.     +..+++|.. .|++++|+.||+.+++.++|+.|++|++......  +.+.  ..-+..+.++|+
T Consensus        63 ~~~~k~~q~~f~Hpl~~~~LKgH~~-~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~dhpT~V~Fa  141 (420)
T KOG2096|consen   63 NDQWKAKQPTFVHPLNVSVLKGHKK-EVTDVAFSSDGKKLATISGDRSIRLWDVRDFENKEHRCIRQNVEYDHPTRVVFA  141 (420)
T ss_pred             hhhhcccCCCcccchhhhhhhccCC-ceeeeEEcCCCceeEEEeCCceEEEEecchhhhhhhhHhhccccCCCceEEEEC
Confidence            44566554433     345789999 9999999999999999999999999998874432  1111  122356889999


Q ss_pred             CCCCEEEE-e-cCCeEEEEEccCCc---eE---------EEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccce
Q psy10867         88 PDAAYIAV-S-IETKLHMWQISSGR---LL---------ATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLIC  153 (343)
Q Consensus        88 ~~~~~l~~-~-~d~~i~v~~~~~~~---~~---------~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~  153 (343)
                      ||.+-++. . ....+++|-+...+   ..         ..-+.|.-.+..+-...++.+|++++.|..|.+|+++ ++.
T Consensus       142 pDc~s~vv~~~~g~~l~vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lk-Gq~  220 (420)
T KOG2096|consen  142 PDCKSVVVSVKRGNKLCVYKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLK-GQL  220 (420)
T ss_pred             CCcceEEEEEccCCEEEEEEeeecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecC-Cce
Confidence            99886665 3 55689999875321   11         1112456677777777789999999999999999998 443


Q ss_pred             eeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecC---CCc-----eEEEee-
Q psy10867        154 KQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLC---TGE-----DLLSLI-  224 (343)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~---~~~-----~~~~~~-  224 (343)
                                            +.........-+..+++|+|  +++++++..--+++|.+-   .|+     .+..+. 
T Consensus       221 ----------------------L~~idtnq~~n~~aavSP~G--RFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkG  276 (420)
T KOG2096|consen  221 ----------------------LQSIDTNQSSNYDAAVSPDG--RFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKG  276 (420)
T ss_pred             ----------------------eeeeccccccccceeeCCCC--cEEEEecCCCCceEEEEEeccCcchhhhhhhheecc
Confidence                                  33344455566778999999  899999999999999863   221     223333 


Q ss_pred             cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccc--cccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCc
Q psy10867        225 LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDH--HIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADET  302 (343)
Q Consensus       225 ~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~  302 (343)
                      |.+.|..++|+++...+++.+.||++++||..-.....+-  .+..+ + ..+....+....+.++|.|+.||.+.. ..
T Consensus       277 H~saV~~~aFsn~S~r~vtvSkDG~wriwdtdVrY~~~qDpk~Lk~g-~-~pl~aag~~p~RL~lsP~g~~lA~s~g-s~  353 (420)
T KOG2096|consen  277 HQSAVLAAAFSNSSTRAVTVSKDGKWRIWDTDVRYEAGQDPKILKEG-S-APLHAAGSEPVRLELSPSGDSLAVSFG-SD  353 (420)
T ss_pred             chhheeeeeeCCCcceeEEEecCCcEEEeeccceEecCCCchHhhcC-C-cchhhcCCCceEEEeCCCCcEEEeecC-Cc
Confidence            7888999999999999999999999999998643222110  00000 0 111122334458999999998887654 47


Q ss_pred             EEEEecccceeeeecc--cCCceEEEEEccCCCeeeeccc
Q psy10867        303 LKIWHTISRQCLRTIQ--HKGPVLGAFLGLLPPAIHDYDF  340 (343)
Q Consensus       303 i~iwd~~~~~~~~~~~--~~~~v~~~~~sp~~~~l~~~~~  340 (343)
                      ++++..++|+...+++  |...|.+++|+|+|+++++++-
T Consensus       354 l~~~~se~g~~~~~~e~~h~~~Is~is~~~~g~~~atcGd  393 (420)
T KOG2096|consen  354 LKVFASEDGKDYPELEDIHSTTISSISYSSDGKYIATCGD  393 (420)
T ss_pred             eEEEEcccCccchhHHHhhcCceeeEEecCCCcEEeeecc
Confidence            9999999999999998  9999999999999999998763

>KOG0639|consensus

Probab=100.00  E-value=3.5e-32  Score=214.51  Aligned_cols=273  Identities=17%  Similarity=0.199  Sum_probs=232.5

Q ss_pred             cCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCccc---ceecc--cCCcceEEEEECCCCCEEEE-ecCCeEEEEEc
Q psy10867         33 GASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEK---AQLRL--ICPGRISSMQASPDAAYIAV-SIETKLHMWQI  106 (343)
Q Consensus        33 ~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~---~~~~~--~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~  106 (343)
                      .|.. -|.++.++...+.+.+|+. |.|+|||+.....   +..+.  .....|.++..+|||+.|++ |.-.++.|||+
T Consensus       417 ~HGE-vVcAvtIS~~trhVyTgGk-gcVKVWdis~pg~k~PvsqLdcl~rdnyiRSckL~pdgrtLivGGeastlsiWDL  494 (705)
T KOG0639|consen  417 AHGE-VVCAVTISNPTRHVYTGGK-GCVKVWDISQPGNKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEASTLSIWDL  494 (705)
T ss_pred             ccCc-EEEEEEecCCcceeEecCC-CeEEEeeccCCCCCCccccccccCcccceeeeEecCCCceEEeccccceeeeeec
Confidence            3555 7888999988888999988 9999999875321   21121  23567899999999988776 56679999999


Q ss_pred             cCCceE--EEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeeccccc
Q psy10867        107 SSGRLL--ATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSL  184 (343)
Q Consensus       107 ~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (343)
                      ....+.  ..+....-..++++.+||.+..+++..||.|.|||++...                      .++.+.+|..
T Consensus       495 AapTprikaeltssapaCyALa~spDakvcFsccsdGnI~vwDLhnq~----------------------~VrqfqGhtD  552 (705)
T KOG0639|consen  495 AAPTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQT----------------------LVRQFQGHTD  552 (705)
T ss_pred             cCCCcchhhhcCCcchhhhhhhcCCccceeeeeccCCcEEEEEcccce----------------------eeecccCCCC
Confidence            876543  3333333467889999999999999999999999999864                      5667789999


Q ss_pred             ceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccc
Q psy10867        185 PVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDH  264 (343)
Q Consensus       185 ~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~  264 (343)
                      .+.||.++++|  ..|-+|+-|+++|.||+++++.+......+.|.++.++|++.+|++|-.++.+.+......+     
T Consensus       553 GascIdis~dG--tklWTGGlDntvRcWDlregrqlqqhdF~SQIfSLg~cP~~dWlavGMens~vevlh~skp~-----  625 (705)
T KOG0639|consen  553 GASCIDISKDG--TKLWTGGLDNTVRCWDLREGRQLQQHDFSSQIFSLGYCPTGDWLAVGMENSNVEVLHTSKPE-----  625 (705)
T ss_pred             CceeEEecCCC--ceeecCCCccceeehhhhhhhhhhhhhhhhhheecccCCCccceeeecccCcEEEEecCCcc-----
Confidence            99999999999  89999999999999999999999998899999999999999999999999999988776543     


Q ss_pred             cccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecccCCceEEEEEccCCCeeeecccCCC
Q psy10867        265 HIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQHKGPVLGAFLGLLPPAIHDYDFTPK  343 (343)
Q Consensus       265 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~~~  343 (343)
                             ...+.-|...|.++.|.+-|+++++.+.|+.+..|.+.-|..+...+....|.++..|.|.++|++++-.+|
T Consensus       626 -------kyqlhlheScVLSlKFa~cGkwfvStGkDnlLnawrtPyGasiFqskE~SsVlsCDIS~ddkyIVTGSGdkk  697 (705)
T KOG0639|consen  626 -------KYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISFDDKYIVTGSGDKK  697 (705)
T ss_pred             -------ceeecccccEEEEEEecccCceeeecCchhhhhhccCccccceeeccccCcceeeeeccCceEEEecCCCcc
Confidence                   334566899999999999999999999999999999999999988888999999999999999999986643

>KOG0308|consensus

Probab=100.00  E-value=7.1e-32  Score=218.69  Aligned_cols=271  Identities=17%  Similarity=0.272  Sum_probs=225.7

Q ss_pred             ccceEEEecCCCCeEEEEecCC--ce----EEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCc--ccceec
Q psy10867          3 LLNEVAFSYDGSGAISVWEPKG--GT----LLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQ--EKAQLR   74 (343)
Q Consensus         3 ~v~~~~~s~~~dg~i~iwd~~~--~~----~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~--~~~~~~   74 (343)
                      +....+|+++.||.|++|+...  ++    .+.+++.|.+ .|..++...+++.+++++.|-+|++|+...+  -+..++
T Consensus        35 ~~~ryLfTgGRDg~i~~W~~~~d~~~~s~~~~asme~HsD-WVNDiiL~~~~~tlIS~SsDtTVK~W~~~~~~~~c~sti  113 (735)
T KOG0308|consen   35 PNGRYLFTGGRDGIIRLWSVTQDSNEPSTPYIASMEHHSD-WVNDIILCGNGKTLISASSDTTVKVWNAHKDNTFCMSTI  113 (735)
T ss_pred             CCCceEEecCCCceEEEeccccccCCcccchhhhhhhhHh-HHhhHHhhcCCCceEEecCCceEEEeecccCcchhHhhh
Confidence            4456799999999999999864  22    3778999999 9999999999977777777799999999877  466778


Q ss_pred             ccCCcceEEEEE-CCCCCEEEE-ecCCeEEEEEccCCc--eEE--------Eec-ccCCCeEEEEEecCCCEEEEecCCC
Q psy10867         75 LICPGRISSMQA-SPDAAYIAV-SIETKLHMWQISSGR--LLA--------TAS-SHYQPITIVKWSADSNFIVTGGEDG  141 (343)
Q Consensus        75 ~~~~~~v~~~~~-s~~~~~l~~-~~d~~i~v~~~~~~~--~~~--------~~~-~~~~~v~~~~~~~~~~~l~s~~~dg  141 (343)
                      ..|.+.|.|+++ .++..++|+ |-|+.|.+||++++.  .+.        .+. ++..+|++++.++.+..|++|+..+
T Consensus       114 r~H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~t~ivsGgtek  193 (735)
T KOG0308|consen  114 RTHKDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTGTIIVSGGTEK  193 (735)
T ss_pred             hcccchheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccceeeeecCCcceEEEecCccc
Confidence            899999999999 667777776 689999999999872  222        223 7888999999999999999999999


Q ss_pred             eEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEE
Q psy10867        142 TICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLL  221 (343)
Q Consensus       142 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~  221 (343)
                      .+++||.++.+                      .+..+.+|...|..+..+++|  ..+++++.||+|++||+...+++.
T Consensus       194 ~lr~wDprt~~----------------------kimkLrGHTdNVr~ll~~dDG--t~~ls~sSDgtIrlWdLgqQrCl~  249 (735)
T KOG0308|consen  194 DLRLWDPRTCK----------------------KIMKLRGHTDNVRVLLVNDDG--TRLLSASSDGTIRLWDLGQQRCLA  249 (735)
T ss_pred             ceEEecccccc----------------------ceeeeeccccceEEEEEcCCC--CeEeecCCCceEEeeeccccceee
Confidence            99999999864                      566677999999999999999  899999999999999999999999


Q ss_pred             Eee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCC
Q psy10867        222 SLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSAD  300 (343)
Q Consensus       222 ~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d  300 (343)
                      ++. |...++++..+|+=..+++|+.||.|+.=|+++.....           .+-....+|..+..+.+.+-+-+++.|
T Consensus       250 T~~vH~e~VWaL~~~~sf~~vYsG~rd~~i~~Tdl~n~~~~t-----------lick~daPv~~l~~~~~~~~~WvtTtd  318 (735)
T KOG0308|consen  250 TYIVHKEGVWALQSSPSFTHVYSGGRDGNIYRTDLRNPAKST-----------LICKEDAPVLKLHLHEHDNSVWVTTTD  318 (735)
T ss_pred             eEEeccCceEEEeeCCCcceEEecCCCCcEEecccCCchhhe-----------EeecCCCchhhhhhccccCCceeeecc
Confidence            987 77789999999999999999999999999998853221           122234556666666555555777788


Q ss_pred             CcEEEEecc
Q psy10867        301 ETLKIWHTI  309 (343)
Q Consensus       301 g~i~iwd~~  309 (343)
                      +.|+-|..+
T Consensus       319 s~I~rW~~~  327 (735)
T KOG0308|consen  319 SSIKRWKLE  327 (735)
T ss_pred             ccceecCCc
Confidence            888888754

>KOG1408|consensus

Probab=100.00  E-value=3.6e-31  Score=217.22  Aligned_cols=274  Identities=16%  Similarity=0.222  Sum_probs=222.8

Q ss_pred             EEEecCCCCeEEEEecCCc---eEEEE--E-----------------e--------------cCCCCcceEEEEeCCceE
Q psy10867          7 VAFSYDGSGAISVWEPKGG---TLLMS--Y-----------------K--------------GASVLSPHSMCLLGNDYV   50 (343)
Q Consensus         7 ~~~s~~~dg~i~iwd~~~~---~~~~~--~-----------------~--------------~~~~~~v~~~~~~~~~~~   50 (343)
                      ...+++.|++|++||++.+   +..+.  +                 .              ....+.+++++.+|+|+.
T Consensus       394 cF~TCSsD~TIRlW~l~~ctnn~vyrRNils~~l~ki~y~d~~~q~~~d~~~~~fdka~~s~~d~r~G~R~~~vSp~gqh  473 (1080)
T KOG1408|consen  394 CFTTCSSDGTIRLWDLAFCTNNQVYRRNILSANLSKIPYEDSTQQIMHDASAGIFDKALVSTCDSRFGFRALAVSPDGQH  473 (1080)
T ss_pred             ceeEecCCCcEEEeecccccccceeecccchhhhhcCccccCchhhhhhccCCcccccchhhcCcccceEEEEECCCcce
Confidence            4678888999999999752   11110  0                 0              011237899999999999


Q ss_pred             EEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECC---CCCEEEE-ecCCeEEEEEccCC-ceEEEecccCCCeEEE
Q psy10867         51 LGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASP---DAAYIAV-SIETKLHMWQISSG-RLLATASSHYQPITIV  125 (343)
Q Consensus        51 ~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~---~~~~l~~-~~d~~i~v~~~~~~-~~~~~~~~~~~~v~~~  125 (343)
                      +|+|+.-|.+++|++...+.......|...|.|+.|+.   ..++||+ +.|..|+|||+... .+++++.+|...|+++
T Consensus       474 LAsGDr~GnlrVy~Lq~l~~~~~~eAHesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~rny~l~qtld~HSssITsv  553 (1080)
T KOG1408|consen  474 LASGDRGGNLRVYDLQELEYTCFMEAHESEILCLEYSFPVLTNKLLASASRDRLIHVYDVKRNYDLVQTLDGHSSSITSV  553 (1080)
T ss_pred             ecccCccCceEEEEehhhhhhhheecccceeEEEeecCchhhhHhhhhccCCceEEEEecccccchhhhhcccccceeEE
Confidence            99999999999999999988888889999999999985   3468886 78999999998644 5678899999999999


Q ss_pred             EEecCC--CEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEe
Q psy10867        126 KWSADS--NFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASV  203 (343)
Q Consensus       126 ~~~~~~--~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~  203 (343)
                      .|..+|  ..+++++.|..|.+--.+.......+                 +...-.-....++.+++.|..  ++++++
T Consensus       554 KFa~~gln~~MiscGADksimFr~~qk~~~g~~f-----------------~r~t~t~~ktTlYDm~Vdp~~--k~v~t~  614 (1080)
T KOG1408|consen  554 KFACNGLNRKMISCGADKSIMFRVNQKASSGRLF-----------------PRHTQTLSKTTLYDMAVDPTS--KLVVTV  614 (1080)
T ss_pred             EEeecCCceEEEeccCchhhheehhccccCceec-----------------cccccccccceEEEeeeCCCc--ceEEEE
Confidence            998876  68999999988765433321111100                 111112234678999999998  899999


Q ss_pred             eCCCeEEEEecCCCceEEEee----cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCcccccc
Q psy10867        204 SHDRTCKIFDLCTGEDLLSLI----LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHE  279 (343)
Q Consensus       204 ~~d~~i~~wd~~~~~~~~~~~----~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~  279 (343)
                      +.|..|+|||+++++..+.|+    +++....+...|.|.|+++.+.|.++.++|+.+++           ++..+.||.
T Consensus       615 cQDrnirif~i~sgKq~k~FKgs~~~eG~lIKv~lDPSgiY~atScsdktl~~~Df~sgE-----------cvA~m~GHs  683 (1080)
T KOG1408|consen  615 CQDRNIRIFDIESGKQVKSFKGSRDHEGDLIKVILDPSGIYLATSCSDKTLCFVDFVSGE-----------CVAQMTGHS  683 (1080)
T ss_pred             ecccceEEEeccccceeeeecccccCCCceEEEEECCCccEEEEeecCCceEEEEeccch-----------hhhhhcCcc
Confidence            999999999999999999997    45678899999999999999999999999998854           477889999


Q ss_pred             CcEEEEEEccCCCEEEEEeCCCcEEEEeccc
Q psy10867        280 KQVTSLSCSITGITLLSSSADETLKIWHTIS  310 (343)
Q Consensus       280 ~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~  310 (343)
                      ..|+.+.|.+|-+.|++.+.||.|.||.+..
T Consensus       684 E~VTG~kF~nDCkHlISvsgDgCIFvW~lp~  714 (1080)
T KOG1408|consen  684 EAVTGVKFLNDCKHLISVSGDGCIFVWKLPL  714 (1080)
T ss_pred             hheeeeeecccchhheeecCCceEEEEECch
Confidence            9999999999999999999999999999754

>KOG0299|consensus

Probab=100.00  E-value=9.3e-31  Score=203.97  Aligned_cols=267  Identities=16%  Similarity=0.224  Sum_probs=218.1

Q ss_pred             ceEEEecCCCCeEEEEecCCceEEE----E-------------E-ecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCC
Q psy10867          5 NEVAFSYDGSGAISVWEPKGGTLLM----S-------------Y-KGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVN   66 (343)
Q Consensus         5 ~~~~~s~~~dg~i~iwd~~~~~~~~----~-------------~-~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~   66 (343)
                      ....|+++.+|+|.-|++.+|+...    +             - +.|.. .+.+++.++||+++++|..|..|.||+.+
T Consensus       154 ~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~k-eil~~avS~Dgkylatgg~d~~v~Iw~~~  232 (479)
T KOG0299|consen  154 DKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVK-EILTLAVSSDGKYLATGGRDRHVQIWDCD  232 (479)
T ss_pred             ccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccc-eeEEEEEcCCCcEEEecCCCceEEEecCc
Confidence            3445555568999999998876331    1             1 25666 89999999999999999999999999999


Q ss_pred             CcccceecccCCcceEEEEECCCC-CEEEEecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEE
Q psy10867         67 SQEKAQLRLICPGRISSMQASPDA-AYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICV  145 (343)
Q Consensus        67 ~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~i  145 (343)
                      +.+.++.+.+|.+.|.+++|-... ++++++.|+.|++|+++....+.++-+|.+.|..|....-++.+-+|+.|+++++
T Consensus       233 t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~vetlyGHqd~v~~IdaL~reR~vtVGgrDrT~rl  312 (479)
T KOG0299|consen  233 TLEHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLSYVETLYGHQDGVLGIDALSRERCVTVGGRDRTVRL  312 (479)
T ss_pred             ccchhhcccccccceeeeeeecCccceeeeecCCceEEEehhHhHHHHHHhCCccceeeechhcccceEEeccccceeEE
Confidence            999999999999999999997654 4555689999999999999999999999999999998888887888889999999


Q ss_pred             eecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-
Q psy10867        146 WQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-  224 (343)
Q Consensus       146 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-  224 (343)
                      |++...                       ....+.++.+.+.|++|-.+.   .+++|+.+|.|.+|++.+.+++.... 
T Consensus       313 wKi~ee-----------------------sqlifrg~~~sidcv~~In~~---HfvsGSdnG~IaLWs~~KKkplf~~~~  366 (479)
T KOG0299|consen  313 WKIPEE-----------------------SQLIFRGGEGSIDCVAFINDE---HFVSGSDNGSIALWSLLKKKPLFTSRL  366 (479)
T ss_pred             Eecccc-----------------------ceeeeeCCCCCeeeEEEeccc---ceeeccCCceEEEeeecccCceeEeec
Confidence            999653                       455667888999999998875   79999999999999999999887765 


Q ss_pred             -c---CC--------cEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCC
Q psy10867        225 -L---DT--------RLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGI  292 (343)
Q Consensus       225 -~---~~--------~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~  292 (343)
                       |   +.        .|++++..|..+++++|+.+|.|++|-+...-+...       ++..+. -.+.|++++|+++|+
T Consensus       367 AHgv~~~~~~~~~~~Witsla~i~~sdL~asGS~~G~vrLW~i~~g~r~i~-------~l~~ls-~~GfVNsl~f~~sgk  438 (479)
T KOG0299|consen  367 AHGVIPELDPVNGNFWITSLAVIPGSDLLASGSWSGCVRLWKIEDGLRAIN-------LLYSLS-LVGFVNSLAFSNSGK  438 (479)
T ss_pred             cccccCCccccccccceeeeEecccCceEEecCCCCceEEEEecCCccccc-------eeeecc-cccEEEEEEEccCCC
Confidence             2   11        689999999999999999999999999987643221       134443 467899999999999


Q ss_pred             EEEEE-eCCCcEEEE
Q psy10867        293 TLLSS-SADETLKIW  306 (343)
Q Consensus       293 ~l~s~-~~dg~i~iw  306 (343)
                      .+++| +....+--|
T Consensus       439 ~ivagiGkEhRlGRW  453 (479)
T KOG0299|consen  439 RIVAGIGKEHRLGRW  453 (479)
T ss_pred             EEEEeccccccccee
Confidence            66655 444444333

>KOG0300|consensus

Probab=100.00  E-value=3.4e-31  Score=197.76  Aligned_cols=278  Identities=15%  Similarity=0.243  Sum_probs=231.5

Q ss_pred             eEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-ecCCeEEEE
Q psy10867         26 TLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SIETKLHMW  104 (343)
Q Consensus        26 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~  104 (343)
                      +.++.+.+|.+ .|..++......++.+++.|.+.+||.++++.++..+.+|.+.|++++|++.+.++++ +.|++-.||
T Consensus       139 ~lvre~~GHkD-GiW~Vaa~~tqpi~gtASADhTA~iWs~Esg~CL~~Y~GH~GSVNsikfh~s~~L~lTaSGD~taHIW  217 (481)
T KOG0300|consen  139 RLVRELEGHKD-GIWHVAADSTQPICGTASADHTARIWSLESGACLATYTGHTGSVNSIKFHNSGLLLLTASGDETAHIW  217 (481)
T ss_pred             eehhhhccccc-ceeeehhhcCCcceeecccccceeEEeeccccceeeecccccceeeEEeccccceEEEccCCcchHHH
Confidence            45677899999 9999998877789999999999999999999999999999999999999999998887 678999999


Q ss_pred             Ec------cC------------------------------C----ceEEEecccCCCeEEEEEecCCCEEEEecCCCeEE
Q psy10867        105 QI------SS------------------------------G----RLLATASSHYQPITIVKWSADSNFIVTGGEDGTIC  144 (343)
Q Consensus       105 ~~------~~------------------------------~----~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~  144 (343)
                      ..      ..                              +    .++..+.+|.+.|.+..|...++++++++.|.+..
T Consensus       218 ~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWDRTAn  297 (481)
T KOG0300|consen  218 KAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMVTASWDRTAN  297 (481)
T ss_pred             HHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEehhhhcCcceeeeeeccccce
Confidence            62      10                              0    23567789999999999999999999999999999


Q ss_pred             EeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCC-ceEEEe
Q psy10867        145 VWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTG-EDLLSL  223 (343)
Q Consensus       145 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~-~~~~~~  223 (343)
                      +||++++.                      ++..+.+|....+.++-+|..  +++++.+.|.+.++||++.. ..+..|
T Consensus       298 lwDVEtge----------------------~v~~LtGHd~ELtHcstHptQ--rLVvTsSrDtTFRLWDFReaI~sV~VF  353 (481)
T KOG0300|consen  298 LWDVETGE----------------------VVNILTGHDSELTHCSTHPTQ--RLVVTSSRDTTFRLWDFREAIQSVAVF  353 (481)
T ss_pred             eeeeccCc----------------------eeccccCcchhccccccCCcc--eEEEEeccCceeEeccchhhcceeeee
Confidence            99999974                      677788999999999999998  89999999999999999843 234445


Q ss_pred             e-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCc
Q psy10867        224 I-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADET  302 (343)
Q Consensus       224 ~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~  302 (343)
                      + |...|++..|..+ ..+++|+.|.+|++||++++..+          +.+++ ...+++.++.+..+..++.--.+..
T Consensus       354 QGHtdtVTS~vF~~d-d~vVSgSDDrTvKvWdLrNMRsp----------lATIR-tdS~~NRvavs~g~~iIAiPhDNRq  421 (481)
T KOG0300|consen  354 QGHTDTVTSVVFNTD-DRVVSGSDDRTVKVWDLRNMRSP----------LATIR-TDSPANRVAVSKGHPIIAIPHDNRQ  421 (481)
T ss_pred             cccccceeEEEEecC-CceeecCCCceEEEeeeccccCc----------ceeee-cCCccceeEeecCCceEEeccCCce
Confidence            5 7788999999875 56889999999999999987543          33443 3577899999988889999989999


Q ss_pred             EEEEecccceeeeecc------cCCceEEEEEccCCC--eeeecccC
Q psy10867        303 LKIWHTISRQCLRTIQ------HKGPVLGAFLGLLPP--AIHDYDFT  341 (343)
Q Consensus       303 i~iwd~~~~~~~~~~~------~~~~v~~~~~sp~~~--~l~~~~~~  341 (343)
                      |++||+. |..+..+.      |...|.+++|..+..  -|++++|.
T Consensus       422 vRlfDln-G~RlaRlPrtsRqgHrRMV~c~AW~eehp~cnLftcGFD  467 (481)
T KOG0300|consen  422 VRLFDLN-GNRLARLPRTSRQGHRRMVTCCAWLEEHPACNLFTCGFD  467 (481)
T ss_pred             EEEEecC-CCccccCCcccccccceeeeeeeccccCccccccccccc
Confidence            9999985 44444332      778899999986543  46676664

>KOG0308|consensus

Probab=100.00  E-value=1.5e-31  Score=216.84  Aligned_cols=262  Identities=14%  Similarity=0.227  Sum_probs=213.4

Q ss_pred             EEEEe-CCceEEEEEcCCCeEEEEeCCCccc------ceecccCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCC--c
Q psy10867         41 SMCLL-GNDYVLGVEKGKPMIQAWPVNSQEK------AQLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQISSG--R  110 (343)
Q Consensus        41 ~~~~~-~~~~~~~~~~~~~~i~iw~~~~~~~------~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~--~  110 (343)
                      .+..+ |+++++.+|+.||.|++|+......      ...+..|.+.|+.++...+++.|++ +.|-+|++|+...+  -
T Consensus        29 ~Lq~da~~~ryLfTgGRDg~i~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~~~~tlIS~SsDtTVK~W~~~~~~~~  108 (735)
T KOG0308|consen   29 ALQLDAPNGRYLFTGGRDGIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCGNGKTLISASSDTTVKVWNAHKDNTF  108 (735)
T ss_pred             hccccCCCCceEEecCCCceEEEeccccccCCcccchhhhhhhhHhHHhhHHhhcCCCceEEecCCceEEEeecccCcch
Confidence            44444 5678888888889999998764332      4556689999999999988876665 88999999999877  5


Q ss_pred             eEEEecccCCCeEEEEE-ecCCCEEEEecCCCeEEEeecCccce--eeeeecCCCCCCCCccccccceeeeec-ccccce
Q psy10867        111 LLATASSHYQPITIVKW-SADSNFIVTGGEDGTICVWQLSRLIC--KQTVAFGIPGSSGKGVTGLTEPLHVKS-QHSLPV  186 (343)
Q Consensus       111 ~~~~~~~~~~~v~~~~~-~~~~~~l~s~~~dg~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v  186 (343)
                      +..++..|.+.|.|+++ .++..++++|+-|+.|.+||++++..  .....              ......+. ++...|
T Consensus       109 c~stir~H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n--------------~~t~~sl~sG~k~si  174 (735)
T KOG0308|consen  109 CMSTIRTHKDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFN--------------NVTVNSLGSGPKDSI  174 (735)
T ss_pred             hHhhhhcccchheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhcc--------------ccccccCCCCCccce
Confidence            67788899999999999 77889999999999999999998732  11111              01222333 789999


Q ss_pred             EEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeeccccccccc
Q psy10867        187 THVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHH  265 (343)
Q Consensus       187 ~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~  265 (343)
                      ++++.++.+  ..+++|+..+.+++||.++.+.+..+. |...|..+..++||..+++++.||+|++||+...       
T Consensus       175 YSLA~N~t~--t~ivsGgtek~lr~wDprt~~kimkLrGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQ-------  245 (735)
T KOG0308|consen  175 YSLAMNQTG--TIIVSGGTEKDLRLWDPRTCKKIMKLRGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQQ-------  245 (735)
T ss_pred             eeeecCCcc--eEEEecCcccceEEeccccccceeeeeccccceEEEEEcCCCCeEeecCCCceEEeeecccc-------
Confidence            999999999  899999999999999999999888887 7889999999999999999999999999999873       


Q ss_pred             ccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccc-eeeeecccCCceEEEEEc
Q psy10867        266 IQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISR-QCLRTIQHKGPVLGAFLG  329 (343)
Q Consensus       266 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~~v~~~~~s  329 (343)
                          .++.++..|...|+++..+|+-..+++|+.||.|..=|+++. +....++...+|..+..+
T Consensus       246 ----rCl~T~~vH~e~VWaL~~~~sf~~vYsG~rd~~i~~Tdl~n~~~~tlick~daPv~~l~~~  306 (735)
T KOG0308|consen  246 ----RCLATYIVHKEGVWALQSSPSFTHVYSGGRDGNIYRTDLRNPAKSTLICKEDAPVLKLHLH  306 (735)
T ss_pred             ----ceeeeEEeccCceEEEeeCCCcceEEecCCCCcEEecccCCchhheEeecCCCchhhhhhc
Confidence                447778899999999999999999999999999999999873 333333344444444433

>KOG0641|consensus

Probab=99.98  E-value=3.7e-29  Score=178.29  Aligned_cols=253  Identities=19%  Similarity=0.219  Sum_probs=206.5

Q ss_pred             EecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccc-----eecccCCcceEEEEECCC----CCEEEEe--cCC
Q psy10867         31 YKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKA-----QLRLICPGRISSMQASPD----AAYIAVS--IET   99 (343)
Q Consensus        31 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~-----~~~~~~~~~v~~~~~s~~----~~~l~~~--~d~   99 (343)
                      -+.|.+ .|.|.+|+|+|.++++|++|.+|++...+...+.     ..+.-|.+.|..++|..+    +.+|+++  .|.
T Consensus        85 ~khhkg-siyc~~ws~~geliatgsndk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc  163 (350)
T KOG0641|consen   85 NKHHKG-SIYCTAWSPCGELIATGSNDKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDC  163 (350)
T ss_pred             ccccCc-cEEEEEecCccCeEEecCCCceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCcc
Confidence            456777 9999999999999999999999999766543322     335578999999999643    4677763  577


Q ss_pred             eEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeee
Q psy10867        100 KLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVK  179 (343)
Q Consensus       100 ~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (343)
                      .|++-|...|+..+.+.+|++.|.++- +-++-++++|+.|.+|++||++-..+..++...               ...-
T Consensus       164 ~iy~tdc~~g~~~~a~sghtghilaly-swn~~m~~sgsqdktirfwdlrv~~~v~~l~~~---------------~~~~  227 (350)
T KOG0641|consen  164 KIYITDCGRGQGFHALSGHTGHILALY-SWNGAMFASGSQDKTIRFWDLRVNSCVNTLDND---------------FHDG  227 (350)
T ss_pred             eEEEeecCCCCcceeecCCcccEEEEE-EecCcEEEccCCCceEEEEeeeccceeeeccCc---------------ccCC
Confidence            899999999999999999999987763 347889999999999999999988776654311               0000


Q ss_pred             cccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecc
Q psy10867        180 SQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQV  258 (343)
Q Consensus       180 ~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~  258 (343)
                      .-....|.++++.|.|  ++|++|-.|....+||++.++.++.+. |...|.++.|+|...|+++++.|..|++-|++..
T Consensus       228 glessavaav~vdpsg--rll~sg~~dssc~lydirg~r~iq~f~phsadir~vrfsp~a~yllt~syd~~ikltdlqgd  305 (350)
T KOG0641|consen  228 GLESSAVAAVAVDPSG--RLLASGHADSSCMLYDIRGGRMIQRFHPHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQGD  305 (350)
T ss_pred             CcccceeEEEEECCCc--ceeeeccCCCceEEEEeeCCceeeeeCCCccceeEEEeCCCceEEEEecccceEEEeecccc
Confidence            1134679999999999  899999999999999999999998887 7888999999999999999999999999999753


Q ss_pred             cccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecc
Q psy10867        259 PRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTI  309 (343)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~  309 (343)
                      -..       .-++.....|...+..+.|+|..--+++.+.|.++.+|-+.
T Consensus       306 la~-------el~~~vv~ehkdk~i~~rwh~~d~sfisssadkt~tlwa~~  349 (350)
T KOG0641|consen  306 LAH-------ELPIMVVAEHKDKAIQCRWHPQDFSFISSSADKTATLWALN  349 (350)
T ss_pred             hhh-------cCceEEEEeccCceEEEEecCccceeeeccCcceEEEeccC
Confidence            211       12244566799999999999999889999999999999763

>KOG0772|consensus

Probab=99.98  E-value=1.5e-30  Score=205.76  Aligned_cols=270  Identities=18%  Similarity=0.200  Sum_probs=203.7

Q ss_pred             ceEEEecCCCCeEEEEecCCc----eEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccce--------
Q psy10867          5 NEVAFSYDGSGAISVWEPKGG----TLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQ--------   72 (343)
Q Consensus         5 ~~~~~s~~~dg~i~iwd~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~--------   72 (343)
                      ..-++|++-|..|+.||+...    +..+.+...+.-.|++++|++.|..+.+.+.....+|+|-...+...        
T Consensus       179 GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLvvsg~aqakl~DRdG~~~~e~~KGDQYI  258 (641)
T KOG0772|consen  179 GARFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQILVVSGSAQAKLLDRDGFEIVEFSKGDQYI  258 (641)
T ss_pred             CceeeeccccceEEEEecccccccchhhhccCcccccccceeeecCCCCeEEEEecCcceeEEccCCceeeeeeccchhh
Confidence            344567777999999998642    22333433332289999999987444444444789999976554332        


Q ss_pred             ----ecccCCcceEEEEECCCC--CEEEEecCCeEEEEEccCCc-eEEEec-----ccCCCeEEEEEecCCCEEEEecCC
Q psy10867         73 ----LRLICPGRISSMQASPDA--AYIAVSIETKLHMWQISSGR-LLATAS-----SHYQPITIVKWSADSNFIVTGGED  140 (343)
Q Consensus        73 ----~~~~~~~~v~~~~~s~~~--~~l~~~~d~~i~v~~~~~~~-~~~~~~-----~~~~~v~~~~~~~~~~~l~s~~~d  140 (343)
                          ...+|...+++.+|+|+.  .+|.++.||++++|+++.-+ .++.++     +..-+++.++|+++++.||+|..|
T Consensus       259 ~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~nrdg~~iAagc~D  338 (641)
T KOG0772|consen  259 RDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWNRDGKLIAAGCLD  338 (641)
T ss_pred             hhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeeccCCCcccCceeeecCCCcchhhhcccC
Confidence                234888999999999975  57777999999999997653 233332     334578999999999999999999


Q ss_pred             CeEEEeecCccceeeeeecCCCCCCCCccccccceeeeeccccc--ceEEEEeecCCCceEEEEeeCCCeEEEEecCCCc
Q psy10867        141 GTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSL--PVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGE  218 (343)
Q Consensus       141 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~  218 (343)
                      |.|.+|+........                   ......+|..  .|+++.|+++|  ++|++-+.|+++++||++..+
T Consensus       339 GSIQ~W~~~~~~v~p-------------------~~~vk~AH~~g~~Itsi~FS~dg--~~LlSRg~D~tLKvWDLrq~k  397 (641)
T KOG0772|consen  339 GSIQIWDKGSRTVRP-------------------VMKVKDAHLPGQDITSISFSYDG--NYLLSRGFDDTLKVWDLRQFK  397 (641)
T ss_pred             CceeeeecCCccccc-------------------ceEeeeccCCCCceeEEEecccc--chhhhccCCCceeeeeccccc
Confidence            999999986543221                   3445567776  89999999999  899999999999999999765


Q ss_pred             e-EEEee---cCCcEEEEEEcCCCCEEEEEcC------CCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEc
Q psy10867        219 D-LLSLI---LDTRLTCVAFDGTEDNIYMGTS------EGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCS  288 (343)
Q Consensus       219 ~-~~~~~---~~~~i~~~~~~~~~~~l~~~~~------d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s  288 (343)
                      . +....   ..-+-+.++|+|+.++|++|+.      .|.+.+||..+......+           .-....|..+.|+
T Consensus       398 kpL~~~tgL~t~~~~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~d~~t~d~v~ki-----------~i~~aSvv~~~Wh  466 (641)
T KOG0772|consen  398 KPLNVRTGLPTPFPGTDCCFSPDDKLILTGTSAPNGMTAGTLFFFDRMTLDTVYKI-----------DISTASVVRCLWH  466 (641)
T ss_pred             cchhhhcCCCccCCCCccccCCCceEEEecccccCCCCCceEEEEeccceeeEEEe-----------cCCCceEEEEeec
Confidence            4 33332   3445788999999999999853      568999998887664433           3346778899999


Q ss_pred             cCCCEEEEEeCCCcEEEE
Q psy10867        289 ITGITLLSSSADETLKIW  306 (343)
Q Consensus       289 ~~~~~l~s~~~dg~i~iw  306 (343)
                      |.-+.|+.|+.||.+++|
T Consensus       467 pkLNQi~~gsgdG~~~vy  484 (641)
T KOG0772|consen  467 PKLNQIFAGSGDGTAHVY  484 (641)
T ss_pred             chhhheeeecCCCceEEE
Confidence            998899999999999986

>KOG0264|consensus

Probab=99.98  E-value=2.6e-30  Score=201.25  Aligned_cols=255  Identities=14%  Similarity=0.204  Sum_probs=202.6

Q ss_pred             cCCCCcceEEEEeCCc-eEEEEEcCCCeEEEEeCCCcccc----------eecccCCcceEEEEECCC--CCEEEEecCC
Q psy10867         33 GASVLSPHSMCLLGND-YVLGVEKGKPMIQAWPVNSQEKA----------QLRLICPGRISSMQASPD--AAYIAVSIET   99 (343)
Q Consensus        33 ~~~~~~v~~~~~~~~~-~~~~~~~~~~~i~iw~~~~~~~~----------~~~~~~~~~v~~~~~s~~--~~~l~~~~d~   99 (343)
                      .|.+ .|+.+.+.|+. .++|+....+.+.|||.....-.          ..+.+|.+.-+.+.|++.  |.+|.++.|+
T Consensus       122 ~h~g-EVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~~~d~  200 (422)
T KOG0264|consen  122 NHDG-EVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQEGTLLSGSDDH  200 (422)
T ss_pred             cCCc-cchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeecccccccccccccceeEeeccCCC
Confidence            3666 88888888865 77777788899999997643221          256688887888999984  4555568899


Q ss_pred             eEEEEEccCCc-------eEEEecccCCCeEEEEEec-CCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCcccc
Q psy10867        100 KLHMWQISSGR-------LLATASSHYQPITIVKWSA-DSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTG  171 (343)
Q Consensus       100 ~i~v~~~~~~~-------~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  171 (343)
                      .|.+||+....       ....+.+|...|..++|++ +...|++++.|+.+.|||+++. .                  
T Consensus       201 ~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~-~------------------  261 (422)
T KOG0264|consen  201 TICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSN-T------------------  261 (422)
T ss_pred             cEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCC-C------------------
Confidence            99999997542       3456789999999999999 5668899999999999999963 1                  


Q ss_pred             ccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCce-EEEee-cCCcEEEEEEcCCC-CEEEEEcCCC
Q psy10867        172 LTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGED-LLSLI-LDTRLTCVAFDGTE-DNIYMGTSEG  248 (343)
Q Consensus       172 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~-~~~~~-~~~~i~~~~~~~~~-~~l~~~~~d~  248 (343)
                       .++.....+|..+|.|++|+|.+. .+||+|+.|++|++||+|+.+. +.++. |...|.++.|+|+. ..|++++.|+
T Consensus       262 -~~~~~~~~ah~~~vn~~~fnp~~~-~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~dev~~V~WSPh~etvLASSg~D~  339 (422)
T KOG0264|consen  262 -SKPSHSVKAHSAEVNCVAFNPFNE-FILATGSADKTVALWDLRNLNKPLHTFEGHEDEVFQVEWSPHNETVLASSGTDR  339 (422)
T ss_pred             -CCCcccccccCCceeEEEeCCCCC-ceEEeccCCCcEEEeechhcccCceeccCCCcceEEEEeCCCCCceeEecccCC
Confidence             125566778999999999999876 8999999999999999997653 44554 78889999999975 5778889999


Q ss_pred             cEEEEEeeccccccccc---ccCCCCCCccccccCcEEEEEEccCCC-EEEEEeCCCcEEEEecc
Q psy10867        249 VIKSFCLRQVPRTRDHH---IQDSTSNPDFIGHEKQVTSLSCSITGI-TLLSSSADETLKIWHTI  309 (343)
Q Consensus       249 ~i~i~d~~~~~~~~~~~---~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~s~~~dg~i~iwd~~  309 (343)
                      .+.+||+......+...   -...+.++.-.||...|..+.|+|+.. .|++.++|+.+.||.+.
T Consensus       340 rl~vWDls~ig~eq~~eda~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s  404 (422)
T KOG0264|consen  340 RLNVWDLSRIGEEQSPEDAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQMA  404 (422)
T ss_pred             cEEEEeccccccccChhhhccCCcceeEEecCcccccccccCCCCCCeEEEEecCCceEEEeecc
Confidence            99999998765543211   111233566779999999999999876 56788999999999975

>KOG1408|consensus

Probab=99.98  E-value=4.7e-30  Score=210.76  Aligned_cols=296  Identities=17%  Similarity=0.171  Sum_probs=230.4

Q ss_pred             CCeEEEEecCCceE---EEEEecCCCCcceEEEEe------------CCceEEEEEcCCCeEEEEeCCCccccee-----
Q psy10867         14 SGAISVWEPKGGTL---LMSYKGASVLSPHSMCLL------------GNDYVLGVEKGKPMIQAWPVNSQEKAQL-----   73 (343)
Q Consensus        14 dg~i~iwd~~~~~~---~~~~~~~~~~~v~~~~~~------------~~~~~~~~~~~~~~i~iw~~~~~~~~~~-----   73 (343)
                      |..++|||++.-..   ...+-.|.. -|+.+.--            |.+.+++++ .|++|++|++.....-.+     
T Consensus       345 dhSlYvWDvrD~~kvgk~~s~lyHS~-ciW~Ve~~p~nv~~~~~aclp~~cF~TCS-sD~TIRlW~l~~ctnn~vyrRNi  422 (1080)
T KOG1408|consen  345 DHSLYVWDVRDVNKVGKCSSMLYHSA-CIWDVENLPCNVHSPTAACLPRGCFTTCS-SDGTIRLWDLAFCTNNQVYRRNI  422 (1080)
T ss_pred             CceEEEEeccccccccceeeeeeccc-eeeeeccccccccCcccccCCccceeEec-CCCcEEEeecccccccceeeccc
Confidence            78999999986332   223444554 55555443            344555544 459999999875211000     


Q ss_pred             --------------------------------cccCCcceEEEEECCCCCEEEEec-CCeEEEEEccCCceEEEecccCC
Q psy10867         74 --------------------------------RLICPGRISSMQASPDAAYIAVSI-ETKLHMWQISSGRLLATASSHYQ  120 (343)
Q Consensus        74 --------------------------------~~~~~~~v~~~~~s~~~~~l~~~~-d~~i~v~~~~~~~~~~~~~~~~~  120 (343)
                                                      .......+.+++.+|+|++||+|. -|+++||++.+-+....++.|..
T Consensus       423 ls~~l~ki~y~d~~~q~~~d~~~~~fdka~~s~~d~r~G~R~~~vSp~gqhLAsGDr~GnlrVy~Lq~l~~~~~~eAHes  502 (1080)
T KOG1408|consen  423 LSANLSKIPYEDSTQQIMHDASAGIFDKALVSTCDSRFGFRALAVSPDGQHLASGDRGGNLRVYDLQELEYTCFMEAHES  502 (1080)
T ss_pred             chhhhhcCccccCchhhhhhccCCcccccchhhcCcccceEEEEECCCcceecccCccCceEEEEehhhhhhhheecccc
Confidence                                            001234589999999999999974 57999999999998889999999


Q ss_pred             CeEEEEEec---CCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCc
Q psy10867        121 PITIVKWSA---DSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAK  197 (343)
Q Consensus       121 ~v~~~~~~~---~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  197 (343)
                      .|.|+.|+.   ..++|++++.|.-|.++|+...-                     .+++.+.+|...|+++.|.-++-+
T Consensus       503 EilcLeyS~p~~~~kLLASasrdRlIHV~Dv~rny---------------------~l~qtld~HSssITsvKFa~~gln  561 (1080)
T KOG1408|consen  503 EILCLEYSFPVLTNKLLASASRDRLIHVYDVKRNY---------------------DLVQTLDGHSSSITSVKFACNGLN  561 (1080)
T ss_pred             eeEEEeecCchhhhHhhhhccCCceEEEEeccccc---------------------chhhhhcccccceeEEEEeecCCc
Confidence            999999985   45789999999999999997642                     267888999999999999887755


Q ss_pred             eEEEEeeCCCeEEEEecCC---CceEEEee---cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCC
Q psy10867        198 SRVASVSHDRTCKIFDLCT---GEDLLSLI---LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTS  271 (343)
Q Consensus       198 ~~l~~~~~d~~i~~wd~~~---~~~~~~~~---~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~  271 (343)
                      ..+++++.|..|.+--.+.   +.......   ....+..++..|+.+++++++.|..|+|||+.+++..+.+       
T Consensus       562 ~~MiscGADksimFr~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~~k~v~t~cQDrnirif~i~sgKq~k~F-------  634 (1080)
T KOG1408|consen  562 RKMISCGADKSIMFRVNQKASSGRLFPRHTQTLSKTTLYDMAVDPTSKLVVTVCQDRNIRIFDIESGKQVKSF-------  634 (1080)
T ss_pred             eEEEeccCchhhheehhccccCceeccccccccccceEEEeeeCCCcceEEEEecccceEEEeccccceeeee-------
Confidence            7899999998876543321   22111111   2456899999999999999999999999999987765443       


Q ss_pred             CCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc-cCCceEEEEEccCCCeeeeccc
Q psy10867        272 NPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVLGAFLGLLPPAIHDYDF  340 (343)
Q Consensus       272 ~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~  340 (343)
                       .--.+|.+....+...|.|.|||+.+.|.++.++|+.+|+++.+.. |...|+.+.|.+|.++|++.+-
T Consensus       635 -Kgs~~~eG~lIKv~lDPSgiY~atScsdktl~~~Df~sgEcvA~m~GHsE~VTG~kF~nDCkHlISvsg  703 (1080)
T KOG1408|consen  635 -KGSRDHEGDLIKVILDPSGIYLATSCSDKTLCFVDFVSGECVAQMTGHSEAVTGVKFLNDCKHLISVSG  703 (1080)
T ss_pred             -cccccCCCceEEEEECCCccEEEEeecCCceEEEEeccchhhhhhcCcchheeeeeecccchhheeecC
Confidence             2234577888899999999999999999999999999999999988 9999999999999999998764

>KOG1274|consensus

Probab=99.97  E-value=4.7e-29  Score=209.89  Aligned_cols=266  Identities=17%  Similarity=0.174  Sum_probs=219.0

Q ss_pred             cCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCc-ccceecccCCcceEEEEECCCCCEEEEecCCeEEEEEccCCce
Q psy10867         33 GASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQ-EKAQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRL  111 (343)
Q Consensus        33 ~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~-~~~~~~~~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~  111 (343)
                      .|.. ..+.++|.|+|.++.+++.||.|++|+..+. +.......+...|.+++... +.+++++.+++|.+|.+.+++.
T Consensus        11 aht~-G~t~i~~d~~gefi~tcgsdg~ir~~~~~sd~e~P~ti~~~g~~v~~ia~~s-~~f~~~s~~~tv~~y~fps~~~   88 (933)
T KOG1274|consen   11 AHTG-GLTLICYDPDGEFICTCGSDGDIRKWKTNSDEEEPETIDISGELVSSIACYS-NHFLTGSEQNTVLRYKFPSGEE   88 (933)
T ss_pred             hccC-ceEEEEEcCCCCEEEEecCCCceEEeecCCcccCCchhhccCceeEEEeecc-cceEEeeccceEEEeeCCCCCc
Confidence            4666 7899999999999999888899999998776 43444434777888888653 3555568899999999999877


Q ss_pred             EEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEe
Q psy10867        112 LATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTL  191 (343)
Q Consensus       112 ~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  191 (343)
                      -..+...+-++.+++|+.+|++++.|+.|-.|++-+.....                      ....+++|.++|.++.|
T Consensus        89 ~~iL~Rftlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s----------------------~~~~lrgh~apVl~l~~  146 (933)
T KOG1274|consen   89 DTILARFTLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSS----------------------QEKVLRGHDAPVLQLSY  146 (933)
T ss_pred             cceeeeeeccceEEEEecCCcEEEeecCceeEEEEeccccc----------------------hheeecccCCceeeeeE
Confidence            66666677889999999999999999999999999998763                      55677899999999999


Q ss_pred             ecCCCceEEEEeeCCCeEEEEecCCCceEEEeec---------CCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccc
Q psy10867        192 SKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLIL---------DTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTR  262 (343)
Q Consensus       192 ~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~---------~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~  262 (343)
                      +|.+  .+||+.+.||.+++||+.++....++..         ...+..++|+|++..+++...|+.|++|+...+....
T Consensus       147 ~p~~--~fLAvss~dG~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~we~~f  224 (933)
T KOG1274|consen  147 DPKG--NFLAVSSCDGKVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNTVKVYSRKGWELQF  224 (933)
T ss_pred             cCCC--CEEEEEecCceEEEEEcccchhhhhcccCCccccccccceeeeeeecCCCCeEEeeccCCeEEEEccCCceehe
Confidence            9999  8999999999999999999887666541         3457789999999999999999999999998876654


Q ss_pred             cccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecccCCceEEEEEccCCCeee
Q psy10867        263 DHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQHKGPVLGAFLGLLPPAIH  336 (343)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~  336 (343)
                      .+         ....+...+..+.|+|+|+|||+++.||.|.|||.++-+.   -.....|.+++|.|++..|-
T Consensus       225 ~L---------r~~~~ss~~~~~~wsPnG~YiAAs~~~g~I~vWnv~t~~~---~~~~~~Vc~~aw~p~~n~it  286 (933)
T KOG1274|consen  225 KL---------RDKLSSSKFSDLQWSPNGKYIAASTLDGQILVWNVDTHER---HEFKRAVCCEAWKPNANAIT  286 (933)
T ss_pred             ee---------cccccccceEEEEEcCCCcEEeeeccCCcEEEEecccchh---ccccceeEEEecCCCCCeeE
Confidence            33         2233445599999999999999999999999999987221   22567899999999987653

>KOG0301|consensus

Probab=99.97  E-value=1.7e-29  Score=206.39  Aligned_cols=257  Identities=18%  Similarity=0.251  Sum_probs=214.3

Q ss_pred             EEEecCCCCeEEEEecCCceEE--EEEecCCCCcceE-EEEeC-CceEEEEEcCCCeEEEEeCCCcccceecccCCcceE
Q psy10867          7 VAFSYDGSGAISVWEPKGGTLL--MSYKGASVLSPHS-MCLLG-NDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRIS   82 (343)
Q Consensus         7 ~~~s~~~dg~i~iwd~~~~~~~--~~~~~~~~~~v~~-~~~~~-~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~   82 (343)
                      .+++++.||++++|+-...+.+  ..+.+|.+ -+.+ +++-+ ++-.++.|+.|.++.+|...+..+..++.+|...|.
T Consensus        27 ~i~s~sRd~t~~vw~~~~~~~l~~~~~~~~~g-~i~~~i~y~e~~~~~l~~g~~D~~i~v~~~~~~~P~~~LkgH~snVC  105 (745)
T KOG0301|consen   27 CIISGSRDGTVKVWAKKGKQYLETHAFEGPKG-FIANSICYAESDKGRLVVGGMDTTIIVFKLSQAEPLYTLKGHKSNVC  105 (745)
T ss_pred             EEeecCCCCceeeeeccCcccccceecccCcc-eeeccceeccccCcceEeecccceEEEEecCCCCchhhhhcccccee
Confidence            4778888999999998665544  45777877 4444 77775 444466666669999999999999999999999999


Q ss_pred             EEEECCCCCEEEEecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCC
Q psy10867         83 SMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIP  162 (343)
Q Consensus        83 ~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~  162 (343)
                      ++....++.++.+++|.++++|..  +++...+.+|+..|+++..-|++ .++||+.|..|++|.-.+            
T Consensus       106 ~ls~~~~~~~iSgSWD~TakvW~~--~~l~~~l~gH~asVWAv~~l~e~-~~vTgsaDKtIklWk~~~------------  170 (745)
T KOG0301|consen  106 SLSIGEDGTLISGSWDSTAKVWRI--GELVYSLQGHTASVWAVASLPEN-TYVTGSADKTIKLWKGGT------------  170 (745)
T ss_pred             eeecCCcCceEecccccceEEecc--hhhhcccCCcchheeeeeecCCC-cEEeccCcceeeeccCCc------------
Confidence            999888888666689999999985  56667799999999999999987 899999999999998755            


Q ss_pred             CCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCCEE
Q psy10867        163 GSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNI  241 (343)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l  241 (343)
                                  .++.+.+|...|+.+++.+++   .+++++.||.|++|++ +++.+.++. |.+-+.++...+++..+
T Consensus       171 ------------~l~tf~gHtD~VRgL~vl~~~---~flScsNDg~Ir~w~~-~ge~l~~~~ghtn~vYsis~~~~~~~I  234 (745)
T KOG0301|consen  171 ------------LLKTFSGHTDCVRGLAVLDDS---HFLSCSNDGSIRLWDL-DGEVLLEMHGHTNFVYSISMALSDGLI  234 (745)
T ss_pred             ------------hhhhhccchhheeeeEEecCC---CeEeecCCceEEEEec-cCceeeeeeccceEEEEEEecCCCCeE
Confidence                        677888999999999999985   5899999999999998 666666655 88889999999999999


Q ss_pred             EEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecc
Q psy10867        242 YMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTI  309 (343)
Q Consensus       242 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~  309 (343)
                      ++++.|++++||+....             .+.+.-....|+++.+-++|. +++|+.||.||||...
T Consensus       235 vs~gEDrtlriW~~~e~-------------~q~I~lPttsiWsa~~L~NgD-Ivvg~SDG~VrVfT~~  288 (745)
T KOG0301|consen  235 VSTGEDRTLRIWKKDEC-------------VQVITLPTTSIWSAKVLLNGD-IVVGGSDGRVRVFTVD  288 (745)
T ss_pred             EEecCCceEEEeecCce-------------EEEEecCccceEEEEEeeCCC-EEEeccCceEEEEEec
Confidence            99999999999987621             333443455789998888876 7888899999999865

>KOG0301|consensus

Probab=99.97  E-value=2.7e-29  Score=205.23  Aligned_cols=268  Identities=16%  Similarity=0.218  Sum_probs=223.8

Q ss_pred             ceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccce--ecccCCcceEE-EEECC--CCCEEEEecCC
Q psy10867         25 GTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQ--LRLICPGRISS-MQASP--DAAYIAVSIET   99 (343)
Q Consensus        25 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~--~~~~~~~~v~~-~~~s~--~~~~l~~~~d~   99 (343)
                      .+..+.+.+|.. .|+.+++.++. .+.++++||++++|+-..++.+.  .+.+|.+-|.. +++.+  .++++.++.|.
T Consensus         4 Y~ls~~l~gH~~-DVr~v~~~~~~-~i~s~sRd~t~~vw~~~~~~~l~~~~~~~~~g~i~~~i~y~e~~~~~l~~g~~D~   81 (745)
T KOG0301|consen    4 YKLSHELEGHKS-DVRAVAVTDGV-CIISGSRDGTVKVWAKKGKQYLETHAFEGPKGFIANSICYAESDKGRLVVGGMDT   81 (745)
T ss_pred             ceeEEEeccCcc-chheeEecCCe-EEeecCCCCceeeeeccCcccccceecccCcceeeccceeccccCcceEeecccc
Confidence            456788999998 99999987665 55556666999999987776653  34467777766 77765  33455568999


Q ss_pred             eEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeee
Q psy10867        100 KLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVK  179 (343)
Q Consensus       100 ~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (343)
                      +|.+|.+.+..++..+++|.+.|.++....++. +++||.|.++++|....                        ....+
T Consensus        82 ~i~v~~~~~~~P~~~LkgH~snVC~ls~~~~~~-~iSgSWD~TakvW~~~~------------------------l~~~l  136 (745)
T KOG0301|consen   82 TIIVFKLSQAEPLYTLKGHKSNVCSLSIGEDGT-LISGSWDSTAKVWRIGE------------------------LVYSL  136 (745)
T ss_pred             eEEEEecCCCCchhhhhccccceeeeecCCcCc-eEecccccceEEecchh------------------------hhccc
Confidence            999999999999999999999999999877776 99999999999999876                        45567


Q ss_pred             cccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecc
Q psy10867        180 SQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQV  258 (343)
Q Consensus       180 ~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~  258 (343)
                      .+|...|.++..-|++   .+++|+.|.+|++|.-  ++.++++. |..-|+.+++-+++ .+++++.||.|++|++.. 
T Consensus       137 ~gH~asVWAv~~l~e~---~~vTgsaDKtIklWk~--~~~l~tf~gHtD~VRgL~vl~~~-~flScsNDg~Ir~w~~~g-  209 (745)
T KOG0301|consen  137 QGHTASVWAVASLPEN---TYVTGSADKTIKLWKG--GTLLKTFSGHTDCVRGLAVLDDS-HFLSCSNDGSIRLWDLDG-  209 (745)
T ss_pred             CCcchheeeeeecCCC---cEEeccCcceeeeccC--CchhhhhccchhheeeeEEecCC-CeEeecCCceEEEEeccC-
Confidence            8999999999999986   7999999999999974  77777777 78889999998864 577888999999999953 


Q ss_pred             cccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeeccc-CCceEEEEEccCCCeeee
Q psy10867        259 PRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQH-KGPVLGAFLGLLPPAIHD  337 (343)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-~~~v~~~~~sp~~~~l~~  337 (343)
                                 ..+.++.+|+.-+++++..+++..++++++|++++||+..  ++.+.+.+ .-.|+++.+-++|..+..
T Consensus       210 -----------e~l~~~~ghtn~vYsis~~~~~~~Ivs~gEDrtlriW~~~--e~~q~I~lPttsiWsa~~L~NgDIvvg  276 (745)
T KOG0301|consen  210 -----------EVLLEMHGHTNFVYSISMALSDGLIVSTGEDRTLRIWKKD--ECVQVITLPTTSIWSAKVLLNGDIVVG  276 (745)
T ss_pred             -----------ceeeeeeccceEEEEEEecCCCCeEEEecCCceEEEeecC--ceEEEEecCccceEEEEEeeCCCEEEe
Confidence                       3366788999999999988888999999999999999975  88888884 448999999999987765


Q ss_pred             cc
Q psy10867        338 YD  339 (343)
Q Consensus       338 ~~  339 (343)
                      ++
T Consensus       277 ~S  278 (745)
T KOG0301|consen  277 GS  278 (745)
T ss_pred             cc
Confidence            54

>KOG0264|consensus

Probab=99.97  E-value=4.9e-30  Score=199.72  Aligned_cols=239  Identities=20%  Similarity=0.271  Sum_probs=192.3

Q ss_pred             ccCCcceEEEEECCCCCEEEE--ecCCeEEEEEccCC----------ceEEEecccCCCeEEEEEecCC-CEEEEecCCC
Q psy10867         75 LICPGRISSMQASPDAAYIAV--SIETKLHMWQISSG----------RLLATASSHYQPITIVKWSADS-NFIVTGGEDG  141 (343)
Q Consensus        75 ~~~~~~v~~~~~s~~~~~l~~--~~d~~i~v~~~~~~----------~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~dg  141 (343)
                      ..|.+.|+.+++.|+...+++  +..+.++|||..+-          .+-.++.+|.+.-++++|++.. -.|++++.|+
T Consensus       121 i~h~gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~~~d~  200 (422)
T KOG0264|consen  121 INHDGEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQEGTLLSGSDDH  200 (422)
T ss_pred             ccCCccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeecccccccccccccceeEeeccCCC
Confidence            368899999999998766665  56789999997543          1223678999888899999844 4799999999


Q ss_pred             eEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCC--Cce
Q psy10867        142 TICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCT--GED  219 (343)
Q Consensus       142 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~--~~~  219 (343)
                      +|++||+.......               ....+...+.+|...|..++|++... .++++.+.|+.+.|||+|+  .+.
T Consensus       201 ~i~lwdi~~~~~~~---------------~~~~p~~~~~~h~~~VeDV~~h~~h~-~lF~sv~dd~~L~iwD~R~~~~~~  264 (422)
T KOG0264|consen  201 TICLWDINAESKED---------------KVVDPKTIFSGHEDVVEDVAWHPLHE-DLFGSVGDDGKLMIWDTRSNTSKP  264 (422)
T ss_pred             cEEEEeccccccCC---------------ccccceEEeecCCcceehhhccccch-hhheeecCCCeEEEEEcCCCCCCC
Confidence            99999998754321               11237788899999999999999876 7899999999999999995  344


Q ss_pred             EEEee-cCCcEEEEEEcCCC-CEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCC-CEEEE
Q psy10867        220 LLSLI-LDTRLTCVAFDGTE-DNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITG-ITLLS  296 (343)
Q Consensus       220 ~~~~~-~~~~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~s  296 (343)
                      ..... |.+.+.|++|+|-+ ..||+|+.|++|.+||+++...          ++..+.+|...|..+.|||+. ..||+
T Consensus       265 ~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~----------~lh~~e~H~dev~~V~WSPh~etvLAS  334 (422)
T KOG0264|consen  265 SHSVKAHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNK----------PLHTFEGHEDEVFQVEWSPHNETVLAS  334 (422)
T ss_pred             cccccccCCceeEEEeCCCCCceEEeccCCCcEEEeechhccc----------CceeccCCCcceEEEEeCCCCCceeEe
Confidence            44433 78899999999954 5778899999999999998754          377899999999999999965 58899


Q ss_pred             EeCCCcEEEEecccce--------------eeeecc-cCCceEEEEEccCCCeeeecc
Q psy10867        297 SSADETLKIWHTISRQ--------------CLRTIQ-HKGPVLGAFLGLLPPAIHDYD  339 (343)
Q Consensus       297 ~~~dg~i~iwd~~~~~--------------~~~~~~-~~~~v~~~~~sp~~~~l~~~~  339 (343)
                      ++.|+.+.+||+..-.              ++..-. |...|..+.|+|+..+++++.
T Consensus       335 Sg~D~rl~vWDls~ig~eq~~eda~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~Sv  392 (422)
T KOG0264|consen  335 SGTDRRLNVWDLSRIGEEQSPEDAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASV  392 (422)
T ss_pred             cccCCcEEEEeccccccccChhhhccCCcceeEEecCcccccccccCCCCCCeEEEEe
Confidence            9999999999986421              122223 788899999999999987653

>KOG2048|consensus

Probab=99.97  E-value=6.4e-28  Score=196.75  Aligned_cols=275  Identities=19%  Similarity=0.224  Sum_probs=216.6

Q ss_pred             cccceEEEecCC--------CCeEEEEecCCce-EEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccce
Q psy10867          2 SLLNEVAFSYDG--------SGAISVWEPKGGT-LLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQ   72 (343)
Q Consensus         2 ~~v~~~~~s~~~--------dg~i~iwd~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~   72 (343)
                      ++|.+++|+...        +|.|.+|++..+- +...+.++++..|.+++|.+.++++.++.+ |.|.-||+.+.+...
T Consensus        26 s~I~slA~s~kS~~lAvsRt~g~IEiwN~~~~w~~~~vi~g~~drsIE~L~W~e~~RLFS~g~s-g~i~EwDl~~lk~~~  104 (691)
T KOG2048|consen   26 SEIVSLAYSHKSNQLAVSRTDGNIEIWNLSNNWFLEPVIHGPEDRSIESLAWAEGGRLFSSGLS-GSITEWDLHTLKQKY  104 (691)
T ss_pred             cceEEEEEeccCCceeeeccCCcEEEEccCCCceeeEEEecCCCCceeeEEEccCCeEEeecCC-ceEEEEecccCceeE
Confidence            567788887665        7999999998754 455677887669999999999999988888 999999999999988


Q ss_pred             ecccCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCCceEE--EecccCCCeEEEEEecCCCEEEEecCCCeEEEeecC
Q psy10867         73 LRLICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGRLLA--TASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLS  149 (343)
Q Consensus        73 ~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~  149 (343)
                      ......+.|.+++.+|.+..++. +.||.+..++...+....  .+...++.|.++.|+|++..+++|+.||.|++||..
T Consensus       105 ~~d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~~~~i~~Gs~Dg~Iriwd~~  184 (691)
T KOG2048|consen  105 NIDSNGGAIWSIAINPENTILAIGCDDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPTGTKIAGGSIDGVIRIWDVK  184 (691)
T ss_pred             EecCCCcceeEEEeCCccceEEeecCCceEEEEecCCceEEEEeecccccceEEEEEecCCccEEEecccCceEEEEEcC
Confidence            88888899999999999988887 588988888877776543  344567899999999999999999999999999999


Q ss_pred             ccceeeeeecCCCCCCCCccccccceeeeec-ccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCC
Q psy10867        150 RLICKQTVAFGIPGSSGKGVTGLTEPLHVKS-QHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDT  227 (343)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~  227 (343)
                      ++........               .+..+. ....-|.++.+..++   .+++|..-|+|.+||...+..+..+. |..
T Consensus       185 ~~~t~~~~~~---------------~~d~l~k~~~~iVWSv~~Lrd~---tI~sgDS~G~V~FWd~~~gTLiqS~~~h~a  246 (691)
T KOG2048|consen  185 SGQTLHIITM---------------QLDRLSKREPTIVWSVLFLRDS---TIASGDSAGTVTFWDSIFGTLIQSHSCHDA  246 (691)
T ss_pred             CCceEEEeee---------------cccccccCCceEEEEEEEeecC---cEEEecCCceEEEEcccCcchhhhhhhhhc
Confidence            8765542211               111111 244568888888775   79999999999999999999988887 889


Q ss_pred             cEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEE
Q psy10867        228 RLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLK  304 (343)
Q Consensus       228 ~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~  304 (343)
                      .|.+++..++++++++++.|+.|..|...........       ......|...|.+++..++  .+++|+.|..+.
T Consensus       247 dVl~Lav~~~~d~vfsaGvd~~ii~~~~~~~~~~wv~-------~~~r~~h~hdvrs~av~~~--~l~sgG~d~~l~  314 (691)
T KOG2048|consen  247 DVLALAVADNEDRVFSAGVDPKIIQYSLTTNKSEWVI-------NSRRDLHAHDVRSMAVIEN--ALISGGRDFTLA  314 (691)
T ss_pred             ceeEEEEcCCCCeEEEccCCCceEEEEecCCccceee-------eccccCCcccceeeeeecc--eEEecceeeEEE
Confidence            9999999999999999999999999988765442111       2234456667777776555  555665555443

>KOG1063|consensus

Probab=99.97  E-value=4.5e-28  Score=198.14  Aligned_cols=326  Identities=14%  Similarity=0.165  Sum_probs=237.9

Q ss_pred             eEEEecCCCCeEEEEecCCce---------------------EEEE----------EecCCCCcceEEEEeCCceEEEEE
Q psy10867          6 EVAFSYDGSGAISVWEPKGGT---------------------LLMS----------YKGASVLSPHSMCLLGNDYVLGVE   54 (343)
Q Consensus         6 ~~~~s~~~dg~i~iwd~~~~~---------------------~~~~----------~~~~~~~~v~~~~~~~~~~~~~~~   54 (343)
                      -++.|++.|..|+||.+.-+.                     .+..          +.||++ .|.++.|+|.+..|.++
T Consensus       207 ~~laS~SQD~yIRiW~i~~~~~~~~~~~e~~~t~~~~~~~f~~l~~i~~~is~eall~GHeD-WV~sv~W~p~~~~LLSA  285 (764)
T KOG1063|consen  207 LLLASSSQDRYIRIWRIVLGDDEDSNEREDSLTTLSNLPVFMILEEIQYRISFEALLMGHED-WVYSVWWHPEGLDLLSA  285 (764)
T ss_pred             EEEEecCCceEEEEEEEEecCCccccccccccccccCCceeeeeeeEEEEEehhhhhcCccc-ceEEEEEccchhhheec
Confidence            467889999999999864322                     1111          348999 99999999999666666


Q ss_pred             cCCCeEEEEeCCCcccc---e----ecccCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCC---ceEEEecccCCCeE
Q psy10867         55 KGKPMIQAWPVNSQEKA---Q----LRLICPGRISSMQASPDAAYIAV-SIETKLHMWQISSG---RLLATASSHYQPIT  123 (343)
Q Consensus        55 ~~~~~i~iw~~~~~~~~---~----~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~---~~~~~~~~~~~~v~  123 (343)
                      +.|.++.+|...+..-+   .    ...+........-|+|++..+++ +..|..++|...+.   .....+.+|.+.|+
T Consensus       286 SaDksmiiW~pd~~tGiWv~~vRlGe~gg~a~GF~g~lw~~n~~~ii~~g~~Gg~hlWkt~d~~~w~~~~~iSGH~~~V~  365 (764)
T KOG1063|consen  286 SADKSMIIWKPDENTGIWVDVVRLGEVGGSAGGFWGGLWSPNSNVIIAHGRTGGFHLWKTKDKTFWTQEPVISGHVDGVK  365 (764)
T ss_pred             ccCcceEEEecCCccceEEEEEEeecccccccceeeEEEcCCCCEEEEecccCcEEEEeccCccceeeccccccccccce
Confidence            66699999987655222   1    11233456888899999988887 88999999983332   23345679999999


Q ss_pred             EEEEecCCCEEEEecCCCeEEEeecCcc-----------------ceeeeee------------------cC--------
Q psy10867        124 IVKWSADSNFIVTGGEDGTICVWQLSRL-----------------ICKQTVA------------------FG--------  160 (343)
Q Consensus       124 ~~~~~~~~~~l~s~~~dg~i~iwd~~~~-----------------~~~~~~~------------------~~--------  160 (343)
                      +++|+|.|++|++.+.|.+-++|-.-..                 .+...++                  .+        
T Consensus       366 dv~W~psGeflLsvs~DQTTRlFa~wg~q~~wHEiaRPQiHGyDl~c~~~vn~~~~FVSgAdEKVlRvF~aPk~fv~~l~  445 (764)
T KOG1063|consen  366 DVDWDPSGEFLLSVSLDQTTRLFARWGRQQEWHEIARPQIHGYDLTCLSFVNEDLQFVSGADEKVLRVFEAPKSFVKSLM  445 (764)
T ss_pred             eeeecCCCCEEEEeccccceeeecccccccceeeecccccccccceeeehccCCceeeecccceeeeeecCcHHHHHHHH
Confidence            9999999999999999999888754310                 0111000                  00        


Q ss_pred             -----------------------------CCCC--CCCc--------------------------cccccceeeeecccc
Q psy10867        161 -----------------------------IPGS--SGKG--------------------------VTGLTEPLHVKSQHS  183 (343)
Q Consensus       161 -----------------------------~~~~--~~~~--------------------------~~~~~~~~~~~~~~~  183 (343)
                                                   .++.  .+..                          ....+...+.+.+|.
T Consensus       446 ~i~g~~~~~~~~~p~gA~VpaLGLSnKa~~~~e~~~G~~~~~~~et~~~~~p~~L~ePP~EdqLq~~tLwPEv~KLYGHG  525 (764)
T KOG1063|consen  446 AICGKCFKGSDELPDGANVPALGLSNKAFFPGETNTGGEAAVCAETPLAAAPCELTEPPTEDQLQQNTLWPEVHKLYGHG  525 (764)
T ss_pred             HHhCccccCchhcccccccccccccCCCCcccccccccccceeeecccccCchhccCCChHHHHHHhccchhhHHhccCc
Confidence                                         0000  0000                          001223445677899


Q ss_pred             cceEEEEeecCCCceEEEEeeCC-----CeEEEEecCCCceEEEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeec
Q psy10867        184 LPVTHVTLSKLGAKSRVASVSHD-----RTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQ  257 (343)
Q Consensus       184 ~~v~~~~~~~~~~~~~l~~~~~d-----~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~  257 (343)
                      ..|++++.+|++  +++++++..     ..|++|+..+-.....+. |.-.|+.++|+||+++|++.+.|.++.+|....
T Consensus       526 yEv~~l~~s~~g--nliASaCKS~~~ehAvI~lw~t~~W~~~~~L~~HsLTVT~l~FSpdg~~LLsvsRDRt~sl~~~~~  603 (764)
T KOG1063|consen  526 YEVYALAISPTG--NLIASACKSSLKEHAVIRLWNTANWLQVQELEGHSLTVTRLAFSPDGRYLLSVSRDRTVSLYEVQE  603 (764)
T ss_pred             eeEEEEEecCCC--CEEeehhhhCCccceEEEEEeccchhhhheecccceEEEEEEECCCCcEEEEeecCceEEeeeeec
Confidence            999999999999  899998764     458999998888777666 777899999999999999999999999998855


Q ss_pred             ccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccc--eeeee---cccCCceEEEEEccC-
Q psy10867        258 VPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISR--QCLRT---IQHKGPVLGAFLGLL-  331 (343)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~--~~~~~---~~~~~~v~~~~~sp~-  331 (343)
                      ..... ..      ....+.|..-|.++.|+|++.+++|+|.|.+|++|.....  +.+..   +++...|++++|.|- 
T Consensus       604 ~~~~e-~~------fa~~k~HtRIIWdcsW~pde~~FaTaSRDK~VkVW~~~~~~d~~i~~~a~~~~~~aVTAv~~~~~~  676 (764)
T KOG1063|consen  604 DIKDE-FR------FACLKAHTRIIWDCSWSPDEKYFATASRDKKVKVWEEPDLRDKYISRFACLKFSLAVTAVAYLPVD  676 (764)
T ss_pred             ccchh-hh------hccccccceEEEEcccCcccceeEEecCCceEEEEeccCchhhhhhhhchhccCCceeeEEeeccc
Confidence            33221 11      2336789999999999999999999999999999998877  54444   347889999998763 


Q ss_pred             ---CCeeeecccC
Q psy10867        332 ---PPAIHDYDFT  341 (343)
Q Consensus       332 ---~~~l~~~~~~  341 (343)
                         ...+++.+++
T Consensus       677 ~~e~~~~vavGle  689 (764)
T KOG1063|consen  677 HNEKGDVVAVGLE  689 (764)
T ss_pred             cccccceEEEEec
Confidence               3336666554

>KOG0647|consensus

Probab=99.97  E-value=3.4e-28  Score=180.12  Aligned_cols=261  Identities=14%  Similarity=0.166  Sum_probs=203.2

Q ss_pred             cccceEEEecCC---------CCeEEEEecCC-ceEE-EEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCccc
Q psy10867          2 SLLNEVAFSYDG---------SGAISVWEPKG-GTLL-MSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEK   70 (343)
Q Consensus         2 ~~v~~~~~s~~~---------dg~i~iwd~~~-~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~   70 (343)
                      +.|..+.|||..         ||+||+|+++. |..+ +....|.+ +|.+++|+.||..+++|+.|+.+++||+.+++.
T Consensus        28 DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~-PvL~v~WsddgskVf~g~~Dk~~k~wDL~S~Q~  106 (347)
T KOG0647|consen   28 DSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDG-PVLDVCWSDDGSKVFSGGCDKQAKLWDLASGQV  106 (347)
T ss_pred             cchheeEeccccCceEEecccCCceEEEEEecCCcccchhhhccCC-CeEEEEEccCCceEEeeccCCceEEEEccCCCe
Confidence            457788888833         89999999976 4443 33556777 999999999999999998889999999999965


Q ss_pred             ceecccCCcceEEEEECCCCC--EEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEee
Q psy10867         71 AQLRLICPGRISSMQASPDAA--YIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQ  147 (343)
Q Consensus        71 ~~~~~~~~~~v~~~~~s~~~~--~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd  147 (343)
                      . ....|.++|..+.|-+...  .|++ +.|.+|+.||.+...++.++. -.+.++++..-  ..+++.+..+..|.+|+
T Consensus       107 ~-~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~-LPeRvYa~Dv~--~pm~vVata~r~i~vyn  182 (347)
T KOG0647|consen  107 S-QVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQ-LPERVYAADVL--YPMAVVATAERHIAVYN  182 (347)
T ss_pred             e-eeeecccceeEEEEecCCCcceeEecccccceeecccCCCCeeeeee-ccceeeehhcc--CceeEEEecCCcEEEEE
Confidence            4 4558999999999987654  7776 689999999999998888876 35667777763  45778888899999999


Q ss_pred             cCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCC--ceEEEee-
Q psy10867        148 LSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTG--EDLLSLI-  224 (343)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~--~~~~~~~-  224 (343)
                      ++.+....                    ......-+-.++|++..++.  ...+.|+-+|.+.+..+..+  +.-..++ 
T Consensus       183 L~n~~te~--------------------k~~~SpLk~Q~R~va~f~d~--~~~alGsiEGrv~iq~id~~~~~~nFtFkC  240 (347)
T KOG0647|consen  183 LENPPTEF--------------------KRIESPLKWQTRCVACFQDK--DGFALGSIEGRVAIQYIDDPNPKDNFTFKC  240 (347)
T ss_pred             cCCCcchh--------------------hhhcCcccceeeEEEEEecC--CceEeeeecceEEEEecCCCCccCceeEEE
Confidence            98753221                    11112234568899999988  56699999999999988876  3333333 


Q ss_pred             cC---------CcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEE
Q psy10867        225 LD---------TRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLL  295 (343)
Q Consensus       225 ~~---------~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~  295 (343)
                      |.         -.|.+++|+|.-..|++++.||+..+||-....+           +.....|..+|++.+|+.+|.++|
T Consensus       241 HR~~~~~~~~VYaVNsi~FhP~hgtlvTaGsDGtf~FWDkdar~k-----------Lk~s~~~~qpItcc~fn~~G~ifa  309 (347)
T KOG0647|consen  241 HRSTNSVNDDVYAVNSIAFHPVHGTLVTAGSDGTFSFWDKDARTK-----------LKTSETHPQPITCCSFNRNGSIFA  309 (347)
T ss_pred             eccCCCCCCceEEecceEeecccceEEEecCCceEEEecchhhhh-----------hhccCcCCCccceeEecCCCCEEE
Confidence            22         1478899999999999999999999999876433           455667899999999999999887


Q ss_pred             EE-eCC
Q psy10867        296 SS-SAD  300 (343)
Q Consensus       296 s~-~~d  300 (343)
                      -+ +.|
T Consensus       310 YA~gYD  315 (347)
T KOG0647|consen  310 YALGYD  315 (347)
T ss_pred             EEeecc
Confidence            54 444

>KOG0639|consensus

Probab=99.97  E-value=2.9e-29  Score=198.17  Aligned_cols=264  Identities=14%  Similarity=0.181  Sum_probs=214.2

Q ss_pred             eEEEecCCCCeEEEEecCC---ceEEEEEecC--CCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccc--eecccCC
Q psy10867          6 EVAFSYDGSGAISVWEPKG---GTLLMSYKGA--SVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKA--QLRLICP   78 (343)
Q Consensus         6 ~~~~s~~~dg~i~iwd~~~---~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~--~~~~~~~   78 (343)
                      .-+|++ |.|.|+|||+..   ..++..+..-  .+ -++++.+.|||+-|.+|+.-.++.|||+......  ..+....
T Consensus       432 rhVyTg-GkgcVKVWdis~pg~k~PvsqLdcl~rdn-yiRSckL~pdgrtLivGGeastlsiWDLAapTprikaeltssa  509 (705)
T KOG0639|consen  432 RHVYTG-GKGCVKVWDISQPGNKSPVSQLDCLNRDN-YIRSCKLLPDGRTLIVGGEASTLSIWDLAAPTPRIKAELTSSA  509 (705)
T ss_pred             ceeEec-CCCeEEEeeccCCCCCCccccccccCccc-ceeeeEecCCCceEEeccccceeeeeeccCCCcchhhhcCCcc
Confidence            334443 368899999864   2344455443  34 7899999999977776666689999999765433  2232333


Q ss_pred             cceEEEEECCCCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeee
Q psy10867         79 GRISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTV  157 (343)
Q Consensus        79 ~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~  157 (343)
                      -...+++.+||.+++.+ +.||.|.|||+.+...++.|++|.+.+.||.+++||..|.+|+-|.+|+-||++++......
T Consensus       510 paCyALa~spDakvcFsccsdGnI~vwDLhnq~~VrqfqGhtDGascIdis~dGtklWTGGlDntvRcWDlregrqlqqh  589 (705)
T KOG0639|consen  510 PACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISKDGTKLWTGGLDNTVRCWDLREGRQLQQH  589 (705)
T ss_pred             hhhhhhhcCCccceeeeeccCCcEEEEEcccceeeecccCCCCCceeEEecCCCceeecCCCccceeehhhhhhhhhhhh
Confidence            46788999999998776 78999999999999999999999999999999999999999999999999999987554432


Q ss_pred             ecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCCcEEEEEEcCC
Q psy10867        158 AFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGT  237 (343)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~  237 (343)
                                             .....|.++..+|.+  .+++.|-+++.+.+......+......|++-|.++.|.+.
T Consensus       590 -----------------------dF~SQIfSLg~cP~~--dWlavGMens~vevlh~skp~kyqlhlheScVLSlKFa~c  644 (705)
T KOG0639|consen  590 -----------------------DFSSQIFSLGYCPTG--DWLAVGMENSNVEVLHTSKPEKYQLHLHESCVLSLKFAYC  644 (705)
T ss_pred             -----------------------hhhhhheecccCCCc--cceeeecccCcEEEEecCCccceeecccccEEEEEEeccc
Confidence                                   245789999999999  8999999999999998776666666668899999999999


Q ss_pred             CCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEec
Q psy10867        238 EDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHT  308 (343)
Q Consensus       238 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~  308 (343)
                      |+++++.+.|+.+..|.+..+....           ..+ ....|.++.+|.|.+++++|+.|....+|.+
T Consensus       645 GkwfvStGkDnlLnawrtPyGasiF-----------qsk-E~SsVlsCDIS~ddkyIVTGSGdkkATVYeV  703 (705)
T KOG0639|consen  645 GKWFVSTGKDNLLNAWRTPYGASIF-----------QSK-ESSSVLSCDISFDDKYIVTGSGDKKATVYEV  703 (705)
T ss_pred             CceeeecCchhhhhhccCcccccee-----------ecc-ccCcceeeeeccCceEEEecCCCcceEEEEE
Confidence            9999999999999999887654432           222 3578999999999999999999998888875

>KOG1539|consensus

Probab=99.97  E-value=3.9e-27  Score=196.46  Aligned_cols=326  Identities=18%  Similarity=0.242  Sum_probs=244.8

Q ss_pred             ccceEEEecCCCCeEEEEecCCc-eE----EEEEecCCCCcceEEEEeCC---ceEEEEEcCCCeEEEEeCCCcccceec
Q psy10867          3 LLNEVAFSYDGSGAISVWEPKGG-TL----LMSYKGASVLSPHSMCLLGN---DYVLGVEKGKPMIQAWPVNSQEKAQLR   74 (343)
Q Consensus         3 ~v~~~~~s~~~dg~i~iwd~~~~-~~----~~~~~~~~~~~v~~~~~~~~---~~~~~~~~~~~~i~iw~~~~~~~~~~~   74 (343)
                      ++..-+++.+.++.+.||+..++ +.    +..++.... .|+++. +|.   ++++.+. .+|.+.|||+.+++.+..+
T Consensus       122 ~fGe~lia~d~~~~l~vw~~s~~~~e~~l~~~~~~~~~~-~Ital~-HP~TYLNKIvvGs-~~G~lql~Nvrt~K~v~~f  198 (910)
T KOG1539|consen  122 PFGEHLIAVDISNILFVWKTSSIQEELYLQSTFLKVEGD-FITALL-HPSTYLNKIVVGS-SQGRLQLWNVRTGKVVYTF  198 (910)
T ss_pred             eecceEEEEEccCcEEEEEeccccccccccceeeeccCC-ceeeEe-cchhheeeEEEee-cCCcEEEEEeccCcEEEEe
Confidence            44555677788999999998774 22    122333333 477764 565   3444444 4599999999999999999


Q ss_pred             ccCCcceEEEEECCCCCEEEEe-cCCeEEEEEccCCceEEEecccCCCeEEEEEecCCC-EEEEecCCCeEEEeecCccc
Q psy10867         75 LICPGRISSMQASPDAAYIAVS-IETKLHMWQISSGRLLATASSHYQPITIVKWSADSN-FIVTGGEDGTICVWQLSRLI  152 (343)
Q Consensus        75 ~~~~~~v~~~~~s~~~~~l~~~-~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~  152 (343)
                      .++...|+++.=+|--..+|.| .+|+|.+++++.++.+.+++...+.|+.+.|.-||+ .+++|+..|.+.+||++..+
T Consensus       199 ~~~~s~IT~ieqsPaLDVVaiG~~~G~ViifNlK~dkil~sFk~d~g~VtslSFrtDG~p~las~~~~G~m~~wDLe~kk  278 (910)
T KOG1539|consen  199 QEFFSRITAIEQSPALDVVAIGLENGTVIIFNLKFDKILMSFKQDWGRVTSLSFRTDGNPLLASGRSNGDMAFWDLEKKK  278 (910)
T ss_pred             cccccceeEeccCCcceEEEEeccCceEEEEEcccCcEEEEEEccccceeEEEeccCCCeeEEeccCCceEEEEEcCCCe
Confidence            9999999999999988888875 799999999999999999986679999999999888 56677778999999999876


Q ss_pred             eeeeeecCCCC-C----------------CCC--------ccccccceeeeecccccceEEEEee-cCCCceEEEEeeCC
Q psy10867        153 CKQTVAFGIPG-S----------------SGK--------GVTGLTEPLHVKSQHSLPVTHVTLS-KLGAKSRVASVSHD  206 (343)
Q Consensus       153 ~~~~~~~~~~~-~----------------~~~--------~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~l~~~~~d  206 (343)
                      ..........+ .                ..+        ...+..+.++...+|..+..++.|. ..+  ..+.+++.|
T Consensus       279 l~~v~~nah~~sv~~~~fl~~epVl~ta~~DnSlk~~vfD~~dg~pR~LR~R~GHs~Pp~~irfy~~~g--~~ilsa~~D  356 (910)
T KOG1539|consen  279 LINVTRNAHYGSVTGATFLPGEPVLVTAGADNSLKVWVFDSGDGVPRLLRSRGGHSAPPSCIRFYGSQG--HFILSAKQD  356 (910)
T ss_pred             eeeeeeccccCCcccceecCCCceEeeccCCCceeEEEeeCCCCcchheeeccCCCCCchheeeeccCc--EEEEecccC
Confidence            65544311100 0                000        0112235566677899999999998 455  788999999


Q ss_pred             CeEEEEecCC-----------------------------------------------------------------Cce-E
Q psy10867        207 RTCKIFDLCT-----------------------------------------------------------------GED-L  220 (343)
Q Consensus       207 ~~i~~wd~~~-----------------------------------------------------------------~~~-~  220 (343)
                      ++++.+++..                                                                 ... .
T Consensus       357 rt~r~fs~~~e~~~~~l~~~~~~~~~kk~~~~~~~~~k~p~i~~fa~~~~RE~~W~Nv~~~h~~~~~~~tW~~~n~~~G~  436 (910)
T KOG1539|consen  357 RTLRSFSVISESQSQELGQLHNKKRAKKVNVFSTEKLKLPPIVEFAFENAREKEWDNVITAHKGKRSAYTWNFRNKTSGR  436 (910)
T ss_pred             cchhhhhhhHHHHhHhhcccccccccccccccchhhhcCCcceeeecccchhhhhcceeEEecCcceEEEEeccCccccc
Confidence            8888776521                                                                 000 0


Q ss_pred             EEeec------CCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEE
Q psy10867        221 LSLIL------DTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITL  294 (343)
Q Consensus       221 ~~~~~------~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l  294 (343)
                      ..+.+      ...+++++.++.|++.+.|...|.|.+|+++++-....+        ..-+.|..+|++++...-++.+
T Consensus       437 ~~L~~~~~~~~~~~~~av~vs~CGNF~~IG~S~G~Id~fNmQSGi~r~sf--------~~~~ah~~~V~gla~D~~n~~~  508 (910)
T KOG1539|consen  437 HVLDPKRFKKDDINATAVCVSFCGNFVFIGYSKGTIDRFNMQSGIHRKSF--------GDSPAHKGEVTGLAVDGTNRLL  508 (910)
T ss_pred             EEecCccccccCcceEEEEEeccCceEEEeccCCeEEEEEcccCeeeccc--------ccCccccCceeEEEecCCCceE
Confidence            11111      245889999999999999999999999999986553322        1235799999999999989999


Q ss_pred             EEEeCCCcEEEEecccceee-----------------------------------------eecc-cCCceEEEEEccCC
Q psy10867        295 LSSSADETLKIWHTISRQCL-----------------------------------------RTIQ-HKGPVLGAFLGLLP  332 (343)
Q Consensus       295 ~s~~~dg~i~iwd~~~~~~~-----------------------------------------~~~~-~~~~v~~~~~sp~~  332 (343)
                      ++++.+|.+++||......+                                         +.|. |.+.|++++|||||
T Consensus       509 vsa~~~Gilkfw~f~~k~l~~~l~l~~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~kvvR~f~gh~nritd~~FS~Dg  588 (910)
T KOG1539|consen  509 VSAGADGILKFWDFKKKVLKKSLRLGSSITGIVYHRVSDLLAIALDDFSIRVVDVVTRKVVREFWGHGNRITDMTFSPDG  588 (910)
T ss_pred             EEccCcceEEEEecCCcceeeeeccCCCcceeeeeehhhhhhhhcCceeEEEEEchhhhhhHHhhccccceeeeEeCCCC
Confidence            99999999999997654322                                         3344 88899999999999


Q ss_pred             CeeeecccC
Q psy10867        333 PAIHDYDFT  341 (343)
Q Consensus       333 ~~l~~~~~~  341 (343)
                      ++|++++..
T Consensus       589 rWlisasmD  597 (910)
T KOG1539|consen  589 RWLISASMD  597 (910)
T ss_pred             cEEEEeecC
Confidence            999999864

>KOG0267|consensus

Probab=99.97  E-value=2e-30  Score=212.70  Aligned_cols=248  Identities=17%  Similarity=0.272  Sum_probs=214.1

Q ss_pred             EEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEec
Q psy10867         51 LGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSA  129 (343)
Q Consensus        51 ~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~  129 (343)
                      +......-.+++|+...      +..|...+.++..-..++.+++ +.|..+-+|.+.....+..+.+|..+|.++.|++
T Consensus         7 ~m~~~~~t~Lr~~~~~~------~~~hsaav~~lk~~~s~r~~~~Gg~~~k~~L~~i~kp~~i~S~~~hespIeSl~f~~   80 (825)
T KOG0267|consen    7 LMKTKRATKLRVWDTRE------FVAHSAAVGCLKIRKSSRSLVTGGEDEKVNLWAIGKPNAITSLTGHESPIESLTFDT   80 (825)
T ss_pred             cceeeeeeccccccchh------hhhhhhhhceeeeeccceeeccCCCceeeccccccCCchhheeeccCCcceeeecCc
Confidence            33333334567776542      3467777888877666777776 5778888999887777778999999999999999


Q ss_pred             CCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeE
Q psy10867        130 DSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTC  209 (343)
Q Consensus       130 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i  209 (343)
                      ...+|++|+.+|+|++||+....                      .++.+.+|...+.++.|+|.+  .+.+.|+.|..+
T Consensus        81 ~E~LlaagsasgtiK~wDleeAk----------------------~vrtLtgh~~~~~sv~f~P~~--~~~a~gStdtd~  136 (825)
T KOG0267|consen   81 SERLLAAGSASGTIKVWDLEEAK----------------------IVRTLTGHLLNITSVDFHPYG--EFFASGSTDTDL  136 (825)
T ss_pred             chhhhcccccCCceeeeehhhhh----------------------hhhhhhccccCcceeeeccce--EEeccccccccc
Confidence            99999999999999999999764                      556778999999999999999  799999999999


Q ss_pred             EEEecCCCceEEEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEc
Q psy10867        210 KIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCS  288 (343)
Q Consensus       210 ~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s  288 (343)
                      ++||.+...+...+. |...+..+.|+|+|++++.|+.|..++|||+..++.           ...|..|...+.++.|+
T Consensus       137 ~iwD~Rk~Gc~~~~~s~~~vv~~l~lsP~Gr~v~~g~ed~tvki~d~~agk~-----------~~ef~~~e~~v~sle~h  205 (825)
T KOG0267|consen  137 KIWDIRKKGCSHTYKSHTRVVDVLRLSPDGRWVASGGEDNTVKIWDLTAGKL-----------SKEFKSHEGKVQSLEFH  205 (825)
T ss_pred             eehhhhccCceeeecCCcceeEEEeecCCCceeeccCCcceeeeeccccccc-----------ccccccccccccccccC
Confidence            999999888888877 677799999999999999999999999999987544           55678899999999999


Q ss_pred             cCCCEEEEEeCCCcEEEEecccceeeeecc-cCCceEEEEEccCCCeeeecc
Q psy10867        289 ITGITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVLGAFLGLLPPAIHDYD  339 (343)
Q Consensus       289 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~  339 (343)
                      |..-++++|+.|+++++||+++.+.+...+ ....|.+.+|+|+++.++++.
T Consensus       206 p~e~Lla~Gs~d~tv~f~dletfe~I~s~~~~~~~v~~~~fn~~~~~~~~G~  257 (825)
T KOG0267|consen  206 PLEVLLAPGSSDRTVRFWDLETFEVISSGKPETDGVRSLAFNPDGKIVLSGE  257 (825)
T ss_pred             chhhhhccCCCCceeeeeccceeEEeeccCCccCCceeeeecCCceeeecCc
Confidence            999999999999999999999999998888 778899999999999988774

>KOG1332|consensus

Probab=99.97  E-value=4.2e-29  Score=179.64  Aligned_cols=239  Identities=15%  Similarity=0.190  Sum_probs=192.7

Q ss_pred             cccCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCC---ceEEEecccCCCeEEEEEec--CCCEEEEecCCCeEEEee
Q psy10867         74 RLICPGRISSMQASPDAAYIAV-SIETKLHMWQISSG---RLLATASSHYQPITIVKWSA--DSNFIVTGGEDGTICVWQ  147 (343)
Q Consensus        74 ~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~---~~~~~~~~~~~~v~~~~~~~--~~~~l~s~~~dg~i~iwd  147 (343)
                      ...|.+.|..+...--|+.||+ ++|++|+|+..+.+   .++.++.+|.++|..++|..  -|.+|++++.||.|.||.
T Consensus         7 dt~H~D~IHda~lDyygkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWk   86 (299)
T KOG1332|consen    7 DTQHEDMIHDAQLDYYGKRLATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWK   86 (299)
T ss_pred             hhhhhhhhhHhhhhhhcceeeeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEe
Confidence            3478888888888778999997 78999999999765   45778999999999999965  799999999999999999


Q ss_pred             cCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCC-c-eEEE--e
Q psy10867        148 LSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTG-E-DLLS--L  223 (343)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~-~-~~~~--~  223 (343)
                      -..++                    +........|...|++++|.|.+-+-.|++++.||.|.+.+.+.. . ....  .
T Consensus        87 e~~g~--------------------w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~  146 (299)
T KOG1332|consen   87 EENGR--------------------WTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVF  146 (299)
T ss_pred             cCCCc--------------------hhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhhhh
Confidence            87763                    224556678999999999999876689999999999999988765 2 1112  2


Q ss_pred             ecCCcEEEEEEcCC---C-----------CEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEcc
Q psy10867        224 ILDTRLTCVAFDGT---E-----------DNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSI  289 (343)
Q Consensus       224 ~~~~~i~~~~~~~~---~-----------~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~  289 (343)
                      .|.-.+++++|.|.   |           +.|++|+.|..|+||+.....-         .....+.+|.+.|..++|.|
T Consensus       147 aH~~GvnsVswapa~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~~w---------~~e~~l~~H~dwVRDVAwaP  217 (299)
T KOG1332|consen  147 AHEIGVNSVSWAPASAPGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSDSW---------KLERTLEGHKDWVRDVAWAP  217 (299)
T ss_pred             ccccccceeeecCcCCCccccccCcccccceeeccCCccceeeeecCCcch---------hhhhhhhhcchhhhhhhhcc
Confidence            37788999999985   4           5699999999999999887521         11345889999999999999


Q ss_pred             CC----CEEEEEeCCCcEEEEecccc--eeeeec-c-cCCceEEEEEccCCCeeeecccC
Q psy10867        290 TG----ITLLSSSADETLKIWHTISR--QCLRTI-Q-HKGPVLGAFLGLLPPAIHDYDFT  341 (343)
Q Consensus       290 ~~----~~l~s~~~dg~i~iwd~~~~--~~~~~~-~-~~~~v~~~~~sp~~~~l~~~~~~  341 (343)
                      .-    .+||+++.||++.||.....  .-..++ + ....+..+.||+.|..|++++-.
T Consensus       218 ~~gl~~s~iAS~SqDg~viIwt~~~e~e~wk~tll~~f~~~~w~vSWS~sGn~LaVs~Gd  277 (299)
T KOG1332|consen  218 SVGLPKSTIASCSQDGTVIIWTKDEEYEPWKKTLLEEFPDVVWRVSWSLSGNILAVSGGD  277 (299)
T ss_pred             ccCCCceeeEEecCCCcEEEEEecCccCcccccccccCCcceEEEEEeccccEEEEecCC
Confidence            63    48999999999999986521  111122 2 46779999999999999987644

>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein

Probab=99.97  E-value=7e-27  Score=189.84  Aligned_cols=260  Identities=11%  Similarity=0.106  Sum_probs=191.8

Q ss_pred             eEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEE-E-ecCCeEEEEEccCCceEEEecccCCCeEEEE
Q psy10867         49 YVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIA-V-SIETKLHMWQISSGRLLATASSHYQPITIVK  126 (343)
Q Consensus        49 ~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~  126 (343)
                      .+++++..|+.+++||+.+++.+..+..+ ..+..++|+|+++.++ + +.++.|++||+.+++....+..+.. +..++
T Consensus         2 ~~~~s~~~d~~v~~~d~~t~~~~~~~~~~-~~~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~~~~   79 (300)
T TIGR03866         2 KAYVSNEKDNTISVIDTATLEVTRTFPVG-QRPRGITLSKDGKLLYVCASDSDTIQVIDLATGEVIGTLPSGPD-PELFA   79 (300)
T ss_pred             cEEEEecCCCEEEEEECCCCceEEEEECC-CCCCceEECCCCCEEEEEECCCCeEEEEECCCCcEEEeccCCCC-ccEEE
Confidence            46777777799999999988877666544 3467899999998764 4 4678999999999988777765544 56789


Q ss_pred             EecCCCEEEEe-cCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeC
Q psy10867        127 WSADSNFIVTG-GEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSH  205 (343)
Q Consensus       127 ~~~~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~  205 (343)
                      |+|+++.++++ +.++.+++||+.+......+                      . +...+.+++|+|++  .++++++.
T Consensus        80 ~~~~g~~l~~~~~~~~~l~~~d~~~~~~~~~~----------------------~-~~~~~~~~~~~~dg--~~l~~~~~  134 (300)
T TIGR03866        80 LHPNGKILYIANEDDNLVTVIDIETRKVLAEI----------------------P-VGVEPEGMAVSPDG--KIVVNTSE  134 (300)
T ss_pred             ECCCCCEEEEEcCCCCeEEEEECCCCeEEeEe----------------------e-CCCCcceEEECCCC--CEEEEEec
Confidence            99999977654 56899999999875433222                      1 22346789999999  78887777


Q ss_pred             CC-eEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEc-CCCcEEEEEeecccccccccccCCCCCCccccccCcEE
Q psy10867        206 DR-TCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGT-SEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVT  283 (343)
Q Consensus       206 d~-~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  283 (343)
                      ++ .+.+||.++++.............++|+|++++|++++ .++.|++||+.+.+....+....    ...........
T Consensus       135 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~i~d~~~~~~~~~~~~~~----~~~~~~~~~~~  210 (300)
T TIGR03866       135 TTNMAHFIDTKTYEIVDNVLVDQRPRFAEFTADGKELWVSSEIGGTVSVIDVATRKVIKKITFEI----PGVHPEAVQPV  210 (300)
T ss_pred             CCCeEEEEeCCCCeEEEEEEcCCCccEEEECCCCCEEEEEcCCCCEEEEEEcCcceeeeeeeecc----cccccccCCcc
Confidence            64 57788998887776665556678899999999886654 58999999998765433221100    00000111245


Q ss_pred             EEEEccCCCEEEE-EeCCCcEEEEecccceeeeecccCCceEEEEEccCCCeeeecc
Q psy10867        284 SLSCSITGITLLS-SSADETLKIWHTISRQCLRTIQHKGPVLGAFLGLLPPAIHDYD  339 (343)
Q Consensus       284 ~~~~s~~~~~l~s-~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~  339 (343)
                      .++|+|++++++. .+.++.+.+||+.+++.+..+.+...+.+++|+|+|++|++++
T Consensus       211 ~i~~s~dg~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~  267 (300)
T TIGR03866       211 GIKLTKDGKTAFVALGPANRVAVVDAKTYEVLDYLLVGQRVWQLAFTPDEKYLLTTN  267 (300)
T ss_pred             ceEECCCCCEEEEEcCCCCeEEEEECCCCcEEEEEEeCCCcceEEECCCCCEEEEEc
Confidence            6889999997554 4556789999999988877766667899999999999998763

Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.

>KOG2055|consensus

Probab=99.97  E-value=1.4e-27  Score=186.49  Aligned_cols=273  Identities=14%  Similarity=0.102  Sum_probs=221.2

Q ss_pred             cceEEEEeCCceEEEEEcCCCeEEEEeCCCccc--ceecccCCcceEEEEECCCCC-EEEE-ecCCeEEEEEccCCceEE
Q psy10867         38 SPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEK--AQLRLICPGRISSMQASPDAA-YIAV-SIETKLHMWQISSGRLLA  113 (343)
Q Consensus        38 ~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~--~~~~~~~~~~v~~~~~s~~~~-~l~~-~~d~~i~v~~~~~~~~~~  113 (343)
                      .|+++.|+|...++.+++-|+.++||.++....  ++.+.-...+|.+..|.|+|. .+++ +....++.||+.+.+..+
T Consensus       215 ~I~sv~FHp~~plllvaG~d~~lrifqvDGk~N~~lqS~~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyDle~ak~~k  294 (514)
T KOG2055|consen  215 GITSVQFHPTAPLLLVAGLDGTLRIFQVDGKVNPKLQSIHLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYDLETAKVTK  294 (514)
T ss_pred             CceEEEecCCCceEEEecCCCcEEEEEecCccChhheeeeeccCccceeeecCCCceEEEecccceEEEEeecccccccc
Confidence            899999999998888888889999998875443  344445567899999999998 5555 567789999998876533


Q ss_pred             --EecccC-CCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEE
Q psy10867        114 --TASSHY-QPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVT  190 (343)
Q Consensus       114 --~~~~~~-~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  190 (343)
                        .+.++. ..+.....+|++++|+..+..|.|.+....+++.+..+.                       -.+.|..++
T Consensus       295 ~~~~~g~e~~~~e~FeVShd~~fia~~G~~G~I~lLhakT~eli~s~K-----------------------ieG~v~~~~  351 (514)
T KOG2055|consen  295 LKPPYGVEEKSMERFEVSHDSNFIAIAGNNGHIHLLHAKTKELITSFK-----------------------IEGVVSDFT  351 (514)
T ss_pred             ccCCCCcccchhheeEecCCCCeEEEcccCceEEeehhhhhhhhheee-----------------------eccEEeeEE
Confidence              333443 356778889999999999999999999998876655443                       567899999


Q ss_pred             eecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCCc--EEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccC
Q psy10867        191 LSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTR--LTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQD  268 (343)
Q Consensus       191 ~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~--i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~  268 (343)
                      |+.++  +.|++.+.+|.|.+||++...++..+..++.  -+++|.++++.+||+|+..|.|.|||.++....     ..
T Consensus       352 fsSds--k~l~~~~~~GeV~v~nl~~~~~~~rf~D~G~v~gts~~~S~ng~ylA~GS~~GiVNIYd~~s~~~s-----~~  424 (514)
T KOG2055|consen  352 FSSDS--KELLASGGTGEVYVWNLRQNSCLHRFVDDGSVHGTSLCISLNGSYLATGSDSGIVNIYDGNSCFAS-----TN  424 (514)
T ss_pred             EecCC--cEEEEEcCCceEEEEecCCcceEEEEeecCccceeeeeecCCCceEEeccCcceEEEeccchhhcc-----CC
Confidence            99998  7888888899999999999999999986665  467888899999999999999999997653221     12


Q ss_pred             CCCCCccccccCcEEEEEEccCCCEEEEEeC--CCcEEEEecccceeeeecc----cCCceEEEEEccCCCeeeeccc
Q psy10867        269 STSNPDFIGHEKQVTSLSCSITGITLLSSSA--DETLKIWHTISRQCLRTIQ----HKGPVLGAFLGLLPPAIHDYDF  340 (343)
Q Consensus       269 ~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~----~~~~v~~~~~sp~~~~l~~~~~  340 (343)
                      .+++..+..-...|+++.|+||.++||.+|.  +..+|+-.+.+......+.    .-+.|+|++|||.+-+|+.|.-
T Consensus       425 PkPik~~dNLtt~Itsl~Fn~d~qiLAiaS~~~knalrLVHvPS~TVFsNfP~~n~~vg~vtc~aFSP~sG~lAvGNe  502 (514)
T KOG2055|consen  425 PKPIKTVDNLTTAITSLQFNHDAQILAIASRVKKNALRLVHVPSCTVFSNFPTSNTKVGHVTCMAFSPNSGYLAVGNE  502 (514)
T ss_pred             CCchhhhhhhheeeeeeeeCcchhhhhhhhhccccceEEEeccceeeeccCCCCCCcccceEEEEecCCCceEEeecC
Confidence            3446666666788999999999999987764  6789999998887777775    4567999999999999998864

>KOG1332|consensus

Probab=99.97  E-value=1e-28  Score=177.62  Aligned_cols=250  Identities=16%  Similarity=0.158  Sum_probs=198.7

Q ss_pred             ecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCccc---ceecccCCcceEEEEECC--CCCEEEE-ecCCeEEEEE
Q psy10867         32 KGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEK---AQLRLICPGRISSMQASP--DAAYIAV-SIETKLHMWQ  105 (343)
Q Consensus        32 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~---~~~~~~~~~~v~~~~~s~--~~~~l~~-~~d~~i~v~~  105 (343)
                      ..|++ .|..+...--|+.||+++.|++|+|+...+...   +..+.+|.++|..++|..  -|.+||+ +.||.|.||.
T Consensus         8 t~H~D-~IHda~lDyygkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWk   86 (299)
T KOG1332|consen    8 TQHED-MIHDAQLDYYGKRLATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWK   86 (299)
T ss_pred             hhhhh-hhhHhhhhhhcceeeeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEe
Confidence            45777 788887777788888888889999999876543   466779999999999976  7899997 7899999999


Q ss_pred             ccCCce--EEEecccCCCeEEEEEec--CCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecc
Q psy10867        106 ISSGRL--LATASSHYQPITIVKWSA--DSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQ  181 (343)
Q Consensus       106 ~~~~~~--~~~~~~~~~~v~~~~~~~--~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (343)
                      -.+++-  ......|...|++++|.|  -|-.|++++.||.|.+.+.+...                   ..........
T Consensus        87 e~~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g-------------------~w~t~ki~~a  147 (299)
T KOG1332|consen   87 EENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSG-------------------GWTTSKIVFA  147 (299)
T ss_pred             cCCCchhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCC-------------------Cccchhhhhc
Confidence            887743  345568999999999988  45689999999999999987741                   1123445567


Q ss_pred             cccceEEEEeecCCC------------ceEEEEeeCCCeEEEEecCCCceE--EEee-cCCcEEEEEEcCCC----CEEE
Q psy10867        182 HSLPVTHVTLSKLGA------------KSRVASVSHDRTCKIFDLCTGEDL--LSLI-LDTRLTCVAFDGTE----DNIY  242 (343)
Q Consensus       182 ~~~~v~~~~~~~~~~------------~~~l~~~~~d~~i~~wd~~~~~~~--~~~~-~~~~i~~~~~~~~~----~~l~  242 (343)
                      |.-.|++++|.|...            -+.|++|+.|..|+||+..+++-.  .++. |..-++.++|.|.-    .+|+
T Consensus       148 H~~GvnsVswapa~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~~w~~e~~l~~H~dwVRDVAwaP~~gl~~s~iA  227 (299)
T KOG1332|consen  148 HEIGVNSVSWAPASAPGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSDSWKLERTLEGHKDWVRDVAWAPSVGLPKSTIA  227 (299)
T ss_pred             cccccceeeecCcCCCccccccCcccccceeeccCCccceeeeecCCcchhhhhhhhhcchhhhhhhhccccCCCceeeE
Confidence            999999999998721            146999999999999999876322  2233 67789999999964    5799


Q ss_pred             EEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecc
Q psy10867        243 MGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTI  309 (343)
Q Consensus       243 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~  309 (343)
                      +++.||++.||..+......+        ...+......+..+.||+.|++|+.++.|+.|.+|.-.
T Consensus       228 S~SqDg~viIwt~~~e~e~wk--------~tll~~f~~~~w~vSWS~sGn~LaVs~GdNkvtlwke~  286 (299)
T KOG1332|consen  228 SCSQDGTVIIWTKDEEYEPWK--------KTLLEEFPDVVWRVSWSLSGNILAVSGGDNKVTLWKEN  286 (299)
T ss_pred             EecCCCcEEEEEecCccCccc--------ccccccCCcceEEEEEeccccEEEEecCCcEEEEEEeC
Confidence            999999999998874333322        12233356789999999999999999999999999743

>KOG1036|consensus

Probab=99.97  E-value=1.6e-27  Score=177.08  Aligned_cols=256  Identities=16%  Similarity=0.212  Sum_probs=195.8

Q ss_pred             cceEEEecCC--------CCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecc
Q psy10867          4 LNEVAFSYDG--------SGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRL   75 (343)
Q Consensus         4 v~~~~~s~~~--------dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~   75 (343)
                      |..+.|++.+        ||.+++||....+....++. .. ++.+.+|.++...++++.+ |.|+.+|++++...+ +.
T Consensus        16 IS~v~f~~~~~~LLvssWDgslrlYdv~~~~l~~~~~~-~~-plL~c~F~d~~~~~~G~~d-g~vr~~Dln~~~~~~-ig   91 (323)
T KOG1036|consen   16 ISSVKFSPSSSDLLVSSWDGSLRLYDVPANSLKLKFKH-GA-PLLDCAFADESTIVTGGLD-GQVRRYDLNTGNEDQ-IG   91 (323)
T ss_pred             eeeEEEcCcCCcEEEEeccCcEEEEeccchhhhhheec-CC-ceeeeeccCCceEEEeccC-ceEEEEEecCCccee-ec
Confidence            5566666444        89999999988766665554 44 9999999987776666666 999999999987654 44


Q ss_pred             cCCcceEEEEECCC-CCEEEEecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCcccee
Q psy10867         76 ICPGRISSMQASPD-AAYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICK  154 (343)
Q Consensus        76 ~~~~~v~~~~~s~~-~~~l~~~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~  154 (343)
                      .|..+|.++.+++. +.++++++|++|++||.+.......+.. ...|.++...  ++.|+.|+.|..+.+||+++....
T Consensus        92 th~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~~~~~~~d~-~kkVy~~~v~--g~~LvVg~~~r~v~iyDLRn~~~~  168 (323)
T KOG1036|consen   92 THDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRNKVVVGTFDQ-GKKVYCMDVS--GNRLVVGTSDRKVLIYDLRNLDEP  168 (323)
T ss_pred             cCCCceEEEEeeccCCeEEEcccCccEEEEecccccccccccc-CceEEEEecc--CCEEEEeecCceEEEEEcccccch
Confidence            89999999999984 5566668999999999987555555543 3478888774  778999999999999999986432


Q ss_pred             eeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCc----eEEEee-c----
Q psy10867        155 QTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGE----DLLSLI-L----  225 (343)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~----~~~~~~-~----  225 (343)
                      .+                    .....-+-.+.++++.|++  .=+++++-||.+.+=.++..+    ....++ |    
T Consensus       169 ~q--------------------~reS~lkyqtR~v~~~pn~--eGy~~sSieGRVavE~~d~s~~~~skkyaFkCHr~~~  226 (323)
T KOG1036|consen  169 FQ--------------------RRESSLKYQTRCVALVPNG--EGYVVSSIEGRVAVEYFDDSEEAQSKKYAFKCHRLSE  226 (323)
T ss_pred             hh--------------------hccccceeEEEEEEEecCC--CceEEEeecceEEEEccCCchHHhhhceeEEeeeccc
Confidence            21                    1122345678999999977  558889999999886665542    222222 2    


Q ss_pred             -----CCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeC
Q psy10867        226 -----DTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSA  299 (343)
Q Consensus       226 -----~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~  299 (343)
                           --+|++++|+|-...+++|+.||.|.+||+.+.++.           ..+......|.+++|+.+|..||.++.
T Consensus       227 ~~~~~~yPVNai~Fhp~~~tfaTgGsDG~V~~Wd~~~rKrl-----------~q~~~~~~SI~slsfs~dG~~LAia~s  294 (323)
T KOG1036|consen  227 KDTEIIYPVNAIAFHPIHGTFATGGSDGIVNIWDLFNRKRL-----------KQLAKYETSISSLSFSMDGSLLAIASS  294 (323)
T ss_pred             CCceEEEEeceeEeccccceEEecCCCceEEEccCcchhhh-----------hhccCCCCceEEEEeccCCCeEEEEec
Confidence                 126999999999999999999999999999886654           344455677999999999999998874

>KOG2106|consensus

Probab=99.97  E-value=8.5e-27  Score=184.22  Aligned_cols=258  Identities=17%  Similarity=0.226  Sum_probs=209.4

Q ss_pred             CCCeEEEEecCCceEEE---EEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCC
Q psy10867         13 GSGAISVWEPKGGTLLM---SYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPD   89 (343)
Q Consensus        13 ~dg~i~iwd~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~   89 (343)
                      |.|.+..|+++.+...+   .++.++..-|.|++|.++|..+++-++ |.|.||+..+.+..+....|.+.|.++....+
T Consensus       220 Gk~H~~Fw~~~~~~l~k~~~~fek~ekk~Vl~v~F~engdviTgDS~-G~i~Iw~~~~~~~~k~~~aH~ggv~~L~~lr~  298 (626)
T KOG2106|consen  220 GKGHLYFWTLRGGSLVKRQGIFEKREKKFVLCVTFLENGDVITGDSG-GNILIWSKGTNRISKQVHAHDGGVFSLCMLRD  298 (626)
T ss_pred             CCceEEEEEccCCceEEEeeccccccceEEEEEEEcCCCCEEeecCC-ceEEEEeCCCceEEeEeeecCCceEEEEEecC
Confidence            46889999998876544   466665448999999999998887777 99999999888777655599999999999999


Q ss_pred             CCEEEEecCCeEEEEEccCC----------------------------------------ceEEEecccCCCeEEEEEec
Q psy10867         90 AAYIAVSIETKLHMWQISSG----------------------------------------RLLATASSHYQPITIVKWSA  129 (343)
Q Consensus        90 ~~~l~~~~d~~i~v~~~~~~----------------------------------------~~~~~~~~~~~~v~~~~~~~  129 (343)
                      |.+|..+.|..|..||-.-.                                        .......+|......++.+|
T Consensus       299 GtllSGgKDRki~~Wd~~y~k~r~~elPe~~G~iRtv~e~~~di~vGTtrN~iL~Gt~~~~f~~~v~gh~delwgla~hp  378 (626)
T KOG2106|consen  299 GTLLSGGKDRKIILWDDNYRKLRETELPEQFGPIRTVAEGKGDILVGTTRNFILQGTLENGFTLTVQGHGDELWGLATHP  378 (626)
T ss_pred             ccEeecCccceEEeccccccccccccCchhcCCeeEEecCCCcEEEeeccceEEEeeecCCceEEEEecccceeeEEcCC
Confidence            99999889999999982200                                        00112246778889999999


Q ss_pred             CCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeE
Q psy10867        130 DSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTC  209 (343)
Q Consensus       130 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i  209 (343)
                      +.+++++++.|+.+++|+  ..+...+                       ..-..++.++.|+|.+   .++.|+..|..
T Consensus       379 s~~q~~T~gqdk~v~lW~--~~k~~wt-----------------------~~~~d~~~~~~fhpsg---~va~Gt~~G~w  430 (626)
T KOG2106|consen  379 SKNQLLTCGQDKHVRLWN--DHKLEWT-----------------------KIIEDPAECADFHPSG---VVAVGTATGRW  430 (626)
T ss_pred             ChhheeeccCcceEEEcc--CCceeEE-----------------------EEecCceeEeeccCcc---eEEEeeccceE
Confidence            999999999999999999  3322221                       2245678899999997   79999999999


Q ss_pred             EEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEcc
Q psy10867        210 KIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSI  289 (343)
Q Consensus       210 ~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~  289 (343)
                      .+.|.++...+......++++++.|+|+|.+||+|+.|+.|++|.+.........       ....  +..+|+.+.||+
T Consensus       431 ~V~d~e~~~lv~~~~d~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~g~~y~r-------~~k~--~gs~ithLDwS~  501 (626)
T KOG2106|consen  431 FVLDTETQDLVTIHTDNEQLSVVRYSPDGAFLAVGSHDNHIYIYRVSANGRKYSR-------VGKC--SGSPITHLDWSS  501 (626)
T ss_pred             EEEecccceeEEEEecCCceEEEEEcCCCCEEEEecCCCeEEEEEECCCCcEEEE-------eeee--cCceeEEeeecC
Confidence            9999999776666667889999999999999999999999999999875543322       2223  338999999999


Q ss_pred             CCCEEEEEeCCCcEEEEec
Q psy10867        290 TGITLLSSSADETLKIWHT  308 (343)
Q Consensus       290 ~~~~l~s~~~dg~i~iwd~  308 (343)
                      |+++|.+-+.|-.|..|..
T Consensus       502 Ds~~~~~~S~d~eiLyW~~  520 (626)
T KOG2106|consen  502 DSQFLVSNSGDYEILYWKP  520 (626)
T ss_pred             CCceEEeccCceEEEEEcc
Confidence            9999999999999999953

>KOG2048|consensus

Probab=99.97  E-value=1.4e-26  Score=189.02  Aligned_cols=268  Identities=14%  Similarity=0.144  Sum_probs=219.6

Q ss_pred             CCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccc-eecc-cCCcceEEEEECCCCCEEEEecCCeEEEEEccCCceE
Q psy10867         35 SVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKA-QLRL-ICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLL  112 (343)
Q Consensus        35 ~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~-~~~~-~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~  112 (343)
                      .. .|.++||+.+...+|.+..+|.|.||++..+-.. ..+. +....|.+++|++.++++.++.+|.|.-||+.+++++
T Consensus        25 Ps-~I~slA~s~kS~~lAvsRt~g~IEiwN~~~~w~~~~vi~g~~drsIE~L~W~e~~RLFS~g~sg~i~EwDl~~lk~~  103 (691)
T KOG2048|consen   25 PS-EIVSLAYSHKSNQLAVSRTDGNIEIWNLSNNWFLEPVIHGPEDRSIESLAWAEGGRLFSSGLSGSITEWDLHTLKQK  103 (691)
T ss_pred             cc-ceEEEEEeccCCceeeeccCCcEEEEccCCCceeeEEEecCCCCceeeEEEccCCeEEeecCCceEEEEecccCcee
Confidence            44 8999999999888999999999999999876544 3333 3456799999998888888899999999999999999


Q ss_pred             EEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEee
Q psy10867        113 ATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLS  192 (343)
Q Consensus       113 ~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  192 (343)
                      ..+....+.|++++.+|.+..++.|++||.+..++...+...                    ....+...++.|.+++|+
T Consensus       104 ~~~d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I~--------------------~~r~l~rq~sRvLslsw~  163 (691)
T KOG2048|consen  104 YNIDSNGGAIWSIAINPENTILAIGCDDGVLYDFSIGPDKIT--------------------YKRSLMRQKSRVLSLSWN  163 (691)
T ss_pred             EEecCCCcceeEEEeCCccceEEeecCCceEEEEecCCceEE--------------------EEeecccccceEEEEEec
Confidence            999999999999999999999999999998888877765433                    223444557899999999


Q ss_pred             cCCCceEEEEeeCCCeEEEEecCCCceEEEee-----c----CCcEEEEEEcCCCCEEEEEcCCCcEEEEEeeccccccc
Q psy10867        193 KLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-----L----DTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRD  263 (343)
Q Consensus       193 ~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-----~----~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~  263 (343)
                      |++  ..+++|+.||.|++||..++..+....     .    +.-|+++.|-. ...|++|...|.|.+||...+..   
T Consensus       164 ~~~--~~i~~Gs~Dg~Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lr-d~tI~sgDS~G~V~FWd~~~gTL---  237 (691)
T KOG2048|consen  164 PTG--TKIAGGSIDGVIRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFLR-DSTIASGDSAGTVTFWDSIFGTL---  237 (691)
T ss_pred             CCc--cEEEecccCceEEEEEcCCCceEEEeeecccccccCCceEEEEEEEee-cCcEEEecCCceEEEEcccCcch---
Confidence            999  789999999999999999998776322     1    12377888874 45799999999999999887544   


Q ss_pred             ccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEeccccee--ee-ec-c-cCCceEEEEEccCCCeeeec
Q psy10867        264 HHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQC--LR-TI-Q-HKGPVLGAFLGLLPPAIHDY  338 (343)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~--~~-~~-~-~~~~v~~~~~sp~~~~l~~~  338 (343)
                              +..+..|...|.+++..+++.++++++.|+.|..|...++..  +. .. . |...+.+++..++  .|+++
T Consensus       238 --------iqS~~~h~adVl~Lav~~~~d~vfsaGvd~~ii~~~~~~~~~~wv~~~~r~~h~hdvrs~av~~~--~l~sg  307 (691)
T KOG2048|consen  238 --------IQSHSCHDADVLALAVADNEDRVFSAGVDPKIIQYSLTTNKSEWVINSRRDLHAHDVRSMAVIEN--ALISG  307 (691)
T ss_pred             --------hhhhhhhhcceeEEEEcCCCCeEEEccCCCceEEEEecCCccceeeeccccCCcccceeeeeecc--eEEec
Confidence                    667788999999999999999999999999999998776533  11 11 2 7888999998877  55555


Q ss_pred             c
Q psy10867        339 D  339 (343)
Q Consensus       339 ~  339 (343)
                      +
T Consensus       308 G  308 (691)
T KOG2048|consen  308 G  308 (691)
T ss_pred             c
Confidence            4

>KOG4328|consensus

Probab=99.96  E-value=1.1e-27  Score=186.91  Aligned_cols=289  Identities=14%  Similarity=0.124  Sum_probs=221.4

Q ss_pred             EecCCceEEEEEecCCCCcceEEEEeCCc--eEEEEEcCCCeEEEEeCCCccc----ceecccCCcceEEEEECCCC--C
Q psy10867         20 WEPKGGTLLMSYKGASVLSPHSMCLLGND--YVLGVEKGKPMIQAWPVNSQEK----AQLRLICPGRISSMQASPDA--A   91 (343)
Q Consensus        20 wd~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~~~~~~~~~i~iw~~~~~~~----~~~~~~~~~~v~~~~~s~~~--~   91 (343)
                      .|+.+-.....++.+.+ .|++++|+|..  .++++|+..|.|-+||+.+.+.    +..+..|..+|.++.|+|.+  +
T Consensus       171 l~l~~~~~~~v~kv~~~-Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~  249 (498)
T KOG4328|consen  171 LDLDDYRILNVAKVTDR-RITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQ  249 (498)
T ss_pred             cccccceecceeEeccc-ceEEEEecccCcceEEEEccCCCcEEEEecCCCCCccCceEEeccCCccccceEecCCChhh
Confidence            34445555666777888 99999999964  7899999989999999953322    35566899999999999954  6


Q ss_pred             EEEEecCCeEEEEEccCCceE--EEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCcc
Q psy10867         92 YIAVSIETKLHMWQISSGRLL--ATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGV  169 (343)
Q Consensus        92 ~l~~~~d~~i~v~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~  169 (343)
                      ++.+++||+|++-|++.+...  ..+......+..+.|+.+...++.+..=|...+||+++...                
T Consensus       250 i~ssSyDGtiR~~D~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s----------------  313 (498)
T KOG4328|consen  250 IYSSSYDGTIRLQDFEGNISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGS----------------  313 (498)
T ss_pred             eeeeccCceeeeeeecchhhHHHhhcCccceeeeeccccCCCccEEEeecccceEEEEeecCCc----------------
Confidence            777799999999999876433  33333455677888988888888888878999999998643                


Q ss_pred             ccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCc-----eEEEeecCCcEEEEEEcCCCCEEEEE
Q psy10867        170 TGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGE-----DLLSLILDTRLTCVAFDGTEDNIYMG  244 (343)
Q Consensus       170 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~-----~~~~~~~~~~i~~~~~~~~~~~l~~~  244 (343)
                           ....+.-|...|..++++|-.+ .++++++.|++.+|||++...     .+..+.|...|.+..|+|.+..|++.
T Consensus       314 -----~~~~~~lh~kKI~sv~~NP~~p-~~laT~s~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gtl~TT  387 (498)
T KOG4328|consen  314 -----EYENLRLHKKKITSVALNPVCP-WFLATASLDQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGTLLTT  387 (498)
T ss_pred             -----cchhhhhhhcccceeecCCCCc-hheeecccCcceeeeehhhhcCCCCcceecccccceeeeeEEcCCCCceEee
Confidence                 3445566888999999999887 899999999999999998643     25566788999999999999889999


Q ss_pred             cCCCcEEEEEeecccccccccccCCCCCCcccccc----Cc--EEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc
Q psy10867        245 TSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHE----KQ--VTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ  318 (343)
Q Consensus       245 ~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~----~~--v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~  318 (343)
                      +.|..|+|||..-.....       .+...+ .|+    .+  .....|.|+..++++|-.-..|-|+|-..++.+..+.
T Consensus       388 ~~D~~IRv~dss~~sa~~-------~p~~~I-~Hn~~t~RwlT~fKA~W~P~~~li~vg~~~r~IDv~~~~~~q~v~el~  459 (498)
T KOG4328|consen  388 CQDNEIRVFDSSCISAKD-------EPLGTI-PHNNRTGRWLTPFKAAWDPDYNLIVVGRYPRPIDVFDGNGGQMVCELH  459 (498)
T ss_pred             ccCCceEEeecccccccC-------Ccccee-eccCcccccccchhheeCCCccEEEEeccCcceeEEcCCCCEEeeecc
Confidence            999999999985211110       001111 122    22  3446799999999999999999999998888787765


Q ss_pred             --cCCceEE-EEEccCCCeeeecc
Q psy10867        319 --HKGPVLG-AFLGLLPPAIHDYD  339 (343)
Q Consensus       319 --~~~~v~~-~~~sp~~~~l~~~~  339 (343)
                        ....|.+ ..|+|-+..+++|+
T Consensus       460 ~P~~~tI~~vn~~HP~~~~~~aG~  483 (498)
T KOG4328|consen  460 DPESSTIPSVNEFHPMRDTLAAGG  483 (498)
T ss_pred             CccccccccceeecccccceeccC
Confidence              3335555 48999988666664

>KOG0294|consensus

Probab=99.96  E-value=3e-27  Score=176.21  Aligned_cols=223  Identities=16%  Similarity=0.201  Sum_probs=185.1

Q ss_pred             EEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCce--EEEEEcCCCeEEEEeCCCcccceecccCCcceEEEE
Q psy10867          8 AFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDY--VLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQ   85 (343)
Q Consensus         8 ~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~   85 (343)
                      +.|++.|-+|+|||+.+...+..+-.|.+ .|+++.|.++-.  .|.+|++||.|.+|+....+.+..+..|.+.|+.++
T Consensus        56 ~aSGssDetI~IYDm~k~~qlg~ll~Hag-sitaL~F~~~~S~shLlS~sdDG~i~iw~~~~W~~~~slK~H~~~Vt~ls  134 (362)
T KOG0294|consen   56 VASGSSDETIHIYDMRKRKQLGILLSHAG-SITALKFYPPLSKSHLLSGSDDGHIIIWRVGSWELLKSLKAHKGQVTDLS  134 (362)
T ss_pred             EeccCCCCcEEEEeccchhhhcceecccc-ceEEEEecCCcchhheeeecCCCcEEEEEcCCeEEeeeecccccccceeE
Confidence            46778899999999999999999999999 999999998763  666777779999999999999999999999999999


Q ss_pred             ECCCCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCC
Q psy10867         86 ASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGS  164 (343)
Q Consensus        86 ~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~  164 (343)
                      .+|.+++..+ +.|+.+++||+-.|+.-..+.- ...-+.+.|+|.|.+++.++.+ .|-+|.+........+.      
T Consensus       135 iHPS~KLALsVg~D~~lr~WNLV~Gr~a~v~~L-~~~at~v~w~~~Gd~F~v~~~~-~i~i~q~d~A~v~~~i~------  206 (362)
T KOG0294|consen  135 IHPSGKLALSVGGDQVLRTWNLVRGRVAFVLNL-KNKATLVSWSPQGDHFVVSGRN-KIDIYQLDNASVFREIE------  206 (362)
T ss_pred             ecCCCceEEEEcCCceeeeehhhcCccceeecc-CCcceeeEEcCCCCEEEEEecc-EEEEEecccHhHhhhhh------
Confidence            9999998776 8999999999999876555542 2223459999999999888874 69999998764433221      


Q ss_pred             CCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEE--cCCCCEE
Q psy10867        165 SGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAF--DGTEDNI  241 (343)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~--~~~~~~l  241 (343)
                                       ....+.++.|...   ..+++|..|+.|.+||..+..+...+. |..+|..+.+  .|++.+|
T Consensus       207 -----------------~~~r~l~~~~l~~---~~L~vG~d~~~i~~~D~ds~~~~~~~~AH~~RVK~i~~~~~~~~~~l  266 (362)
T KOG0294|consen  207 -----------------NPKRILCATFLDG---SELLVGGDNEWISLKDTDSDTPLTEFLAHENRVKDIASYTNPEHEYL  266 (362)
T ss_pred             -----------------ccccceeeeecCC---ceEEEecCCceEEEeccCCCccceeeecchhheeeeEEEecCCceEE
Confidence                             2245667776655   489999999999999999888888776 8899999884  4567899


Q ss_pred             EEEcCCCcEEEEEeeccc
Q psy10867        242 YMGTSEGVIKSFCLRQVP  259 (343)
Q Consensus       242 ~~~~~d~~i~i~d~~~~~  259 (343)
                      ++++.||.|++||++...
T Consensus       267 vTaSSDG~I~vWd~~~~~  284 (362)
T KOG0294|consen  267 VTASSDGFIKVWDIDMET  284 (362)
T ss_pred             EEeccCceEEEEEccccc
Confidence            999999999999998753

>KOG0321|consensus

Probab=99.96  E-value=9.8e-28  Score=194.45  Aligned_cols=278  Identities=15%  Similarity=0.207  Sum_probs=207.9

Q ss_pred             ceEEEecCCCCeEEEEecCCceE------EEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCccccee--ccc
Q psy10867          5 NEVAFSYDGSGAISVWEPKGGTL------LMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQL--RLI   76 (343)
Q Consensus         5 ~~~~~s~~~dg~i~iwd~~~~~~------~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~--~~~   76 (343)
                      .++++.++.+|.|.++|......      +..+..|.+ +|..+.|-|....|++.+.|.++++||++..+....  ..+
T Consensus        64 eHiLavadE~G~i~l~dt~~~~fr~ee~~lk~~~aH~n-AifDl~wapge~~lVsasGDsT~r~Wdvk~s~l~G~~~~~G  142 (720)
T KOG0321|consen   64 EHILAVADEDGGIILFDTKSIVFRLEERQLKKPLAHKN-AIFDLKWAPGESLLVSASGDSTIRPWDVKTSRLVGGRLNLG  142 (720)
T ss_pred             cceEEEecCCCceeeecchhhhcchhhhhhcccccccc-eeEeeccCCCceeEEEccCCceeeeeeeccceeecceeecc
Confidence            46788899999999999875332      356778998 999999999778888888889999999999988744  779


Q ss_pred             CCcceEEEEECCCCCE-EEE-ecCCeEEEEEccCCc--------------------e-------EEEecccCCCeEE---
Q psy10867         77 CPGRISSMQASPDAAY-IAV-SIETKLHMWQISSGR--------------------L-------LATASSHYQPITI---  124 (343)
Q Consensus        77 ~~~~v~~~~~s~~~~~-l~~-~~d~~i~v~~~~~~~--------------------~-------~~~~~~~~~~v~~---  124 (343)
                      |...|.+++|.|.+.. +++ +.||.|.|||++-..                    .       +..-..+...|.+   
T Consensus       143 H~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s~ti~ssvT  222 (720)
T KOG0321|consen  143 HTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAASNTIFSSVT  222 (720)
T ss_pred             cccccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhccccccccccCceeeeeE
Confidence            9999999999997754 444 689999999986321                    0       1111234445555   


Q ss_pred             EEEecCCCEEEEecC-CCeEEEeecCccceeeeeecCCCCCCCCccccccceeee--eccc---ccceEEEEeecCCCce
Q psy10867        125 VKWSADSNFIVTGGE-DGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHV--KSQH---SLPVTHVTLSKLGAKS  198 (343)
Q Consensus       125 ~~~~~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~v~~~~~~~~~~~~  198 (343)
                      +.+..|...|++++. |+.|++||++.........                +...  +..|   .-.+.++.....|  .
T Consensus       223 vv~fkDe~tlaSaga~D~~iKVWDLRk~~~~~r~e----------------p~~~~~~~t~skrs~G~~nL~lDssG--t  284 (720)
T KOG0321|consen  223 VVLFKDESTLASAGAADSTIKVWDLRKNYTAYRQE----------------PRGSDKYPTHSKRSVGQVNLILDSSG--T  284 (720)
T ss_pred             EEEEeccceeeeccCCCcceEEEeecccccccccC----------------CCcccCccCcccceeeeEEEEecCCC--C
Confidence            556678889999887 9999999999875543322                1111  1122   3456777777777  6


Q ss_pred             EEEEeeCCCeEEEEecCCCceE--EEeec---CCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCC
Q psy10867        199 RVASVSHDRTCKIFDLCTGEDL--LSLIL---DTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNP  273 (343)
Q Consensus       199 ~l~~~~~d~~i~~wd~~~~~~~--~~~~~---~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~  273 (343)
                      +|++.+.|+.|++|++.+...-  ..+.+   ..-...-..+|++.++++|+.|...++|.+.+.+..          ..
T Consensus       285 ~L~AsCtD~sIy~ynm~s~s~sP~~~~sg~~~~sf~vks~lSpd~~~l~SgSsd~~ayiw~vs~~e~~----------~~  354 (720)
T KOG0321|consen  285 YLFASCTDNSIYFYNMRSLSISPVAEFSGKLNSSFYVKSELSPDDCSLLSGSSDEQAYIWVVSSPEAP----------PA  354 (720)
T ss_pred             eEEEEecCCcEEEEeccccCcCchhhccCcccceeeeeeecCCCCceEeccCCCcceeeeeecCccCC----------hh
Confidence            7777777999999999865432  22221   112233457899999999999999999999886544          45


Q ss_pred             ccccccCcEEEEEEccCC-CEEEEEeCCCcEEEEecccc
Q psy10867        274 DFIGHEKQVTSLSCSITG-ITLLSSSADETLKIWHTISR  311 (343)
Q Consensus       274 ~~~~~~~~v~~~~~s~~~-~~l~s~~~dg~i~iwd~~~~  311 (343)
                      .+.+|...|++++|.|.. .-+++++.|..+++|++.++
T Consensus       355 ~l~Ght~eVt~V~w~pS~~t~v~TcSdD~~~kiW~l~~~  393 (720)
T KOG0321|consen  355 LLLGHTREVTTVRWLPSATTPVATCSDDFRVKIWRLSNG  393 (720)
T ss_pred             hhhCcceEEEEEeeccccCCCceeeccCcceEEEeccCc
Confidence            678999999999998843 35777899999999998654

>KOG4378|consensus

Probab=99.96  E-value=1.5e-27  Score=188.21  Aligned_cols=291  Identities=11%  Similarity=0.139  Sum_probs=219.4

Q ss_pred             EEEecCCCCeEEEEecCCceEEEEEecCCC-CcceEEEEeCCce-EEEEEcCCCeEEEEeCCCc--ccceecccCCcceE
Q psy10867          7 VAFSYDGSGAISVWEPKGGTLLMSYKGASV-LSPHSMCLLGNDY-VLGVEKGKPMIQAWPVNSQ--EKAQLRLICPGRIS   82 (343)
Q Consensus         7 ~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~~v~~~~~~~~~~-~~~~~~~~~~i~iw~~~~~--~~~~~~~~~~~~v~   82 (343)
                      +.+..++| .+++||....+....+..|.. -.+.+++|+.... .++....|..+++|.-...  +.........+.-.
T Consensus         5 l~~aS~gd-~~kl~D~s~~~~~~~~~~~t~~pg~~s~~w~~~n~lvvas~~gdk~~~~~~K~g~~~~Vp~~~k~~gd~~~   83 (673)
T KOG4378|consen    5 LHVASTGD-KTKLSDFSDLETKSEYVHQTAEPGDFSFNWQRRNFLVVASMAGDKVMRIKEKDGKTPEVPRVRKLTGDNAF   83 (673)
T ss_pred             eeeeccCC-ceEEeecccccCccccccCCCCCcceeeeccccceEEEeecCCceeEEEecccCCCCccceeeccccchHH
Confidence            44555555 699999987665555544431 1578889987764 4444556688999975433  22222222222444


Q ss_pred             EEEECCCCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCC
Q psy10867         83 SMQASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGI  161 (343)
Q Consensus        83 ~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~  161 (343)
                      |++......++++ |..+.|+|||++...+.+.+++|...|+++.++-...+|++++..|.|.|..+.++....++.   
T Consensus        84 Cv~~~s~S~y~~sgG~~~~Vkiwdl~~kl~hr~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~tt~f~---  160 (673)
T KOG4378|consen   84 CVACASQSLYEISGGQSGCVKIWDLRAKLIHRFLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKTTTFT---  160 (673)
T ss_pred             HHhhhhcceeeeccCcCceeeehhhHHHHHhhhccCCcceeEEEEecCCcceeEEeccCCcEEEEecccCcccccee---
Confidence            5555445577776 788999999999777788899999999999999999999999999999999998874433221   


Q ss_pred             CCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee--cCCcEEEEEEcCCC-
Q psy10867        162 PGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI--LDTRLTCVAFDGTE-  238 (343)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~--~~~~i~~~~~~~~~-  238 (343)
                                        .+....|.-+.|+|..+ .+|.+++.+|.|.+||+....++..+.  |..+...++|+|.. 
T Consensus       161 ------------------~~sgqsvRll~ys~skr-~lL~~asd~G~VtlwDv~g~sp~~~~~~~HsAP~~gicfspsne  221 (673)
T KOG4378|consen  161 ------------------IDSGQSVRLLRYSPSKR-FLLSIASDKGAVTLWDVQGMSPIFHASEAHSAPCRGICFSPSNE  221 (673)
T ss_pred             ------------------cCCCCeEEEeecccccc-eeeEeeccCCeEEEEeccCCCcccchhhhccCCcCcceecCCcc
Confidence                              12345567899999875 788899999999999998877776665  78899999999965 


Q ss_pred             CEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccc-eeeeec
Q psy10867        239 DNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISR-QCLRTI  317 (343)
Q Consensus       239 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~-~~~~~~  317 (343)
                      .+|++.+.|.+|.+||.+.......           + ....+.+.++|+++|.+|++|+..|.|..||++.. .++..+
T Consensus       222 ~l~vsVG~Dkki~~yD~~s~~s~~~-----------l-~y~~Plstvaf~~~G~~L~aG~s~G~~i~YD~R~~k~Pv~v~  289 (673)
T KOG4378|consen  222 ALLVSVGYDKKINIYDIRSQASTDR-----------L-TYSHPLSTVAFSECGTYLCAGNSKGELIAYDMRSTKAPVAVR  289 (673)
T ss_pred             ceEEEecccceEEEeecccccccce-----------e-eecCCcceeeecCCceEEEeecCCceEEEEecccCCCCceEe
Confidence            4667789999999999986433221           1 24567899999999999999999999999999864 566666


Q ss_pred             c-cCCceEEEEEccCC
Q psy10867        318 Q-HKGPVLGAFLGLLP  332 (343)
Q Consensus       318 ~-~~~~v~~~~~sp~~  332 (343)
                      . |...|++++|-|..
T Consensus       290 sah~~sVt~vafq~s~  305 (673)
T KOG4378|consen  290 SAHDASVTRVAFQPSP  305 (673)
T ss_pred             eecccceeEEEeeecc
Confidence            6 88999999998875

>KOG1274|consensus

Probab=99.96  E-value=4.7e-27  Score=198.01  Aligned_cols=267  Identities=15%  Similarity=0.154  Sum_probs=210.8

Q ss_pred             cceEEEecCCCCeEEEEecCCc-eEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceE
Q psy10867          4 LNEVAFSYDGSGAISVWEPKGG-TLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRIS   82 (343)
Q Consensus         4 v~~~~~s~~~dg~i~iwd~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~   82 (343)
                      -...+++++.||.|++|+..+- +...++..+.. .|.+++..  +..+++++.+++|.+|...+++.-..+....-++.
T Consensus        24 ~gefi~tcgsdg~ir~~~~~sd~e~P~ti~~~g~-~v~~ia~~--s~~f~~~s~~~tv~~y~fps~~~~~iL~Rftlp~r  100 (933)
T KOG1274|consen   24 DGEFICTCGSDGDIRKWKTNSDEEEPETIDISGE-LVSSIACY--SNHFLTGSEQNTVLRYKFPSGEEDTILARFTLPIR  100 (933)
T ss_pred             CCCEEEEecCCCceEEeecCCcccCCchhhccCc-eeEEEeec--ccceEEeeccceEEEeeCCCCCccceeeeeeccce
Confidence            3445677777999999997665 44444544555 67777654  34666677779999999999887767777788999


Q ss_pred             EEEECCCCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCC
Q psy10867         83 SMQASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGI  161 (343)
Q Consensus        83 ~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~  161 (343)
                      +++|+.+|+++|+ +.|-.|++.++.+......+++|.++|.++.|+|++++||+.+-||.|++||+.++....++..  
T Consensus       101 ~~~v~g~g~~iaagsdD~~vK~~~~~D~s~~~~lrgh~apVl~l~~~p~~~fLAvss~dG~v~iw~~~~~~~~~tl~~--  178 (933)
T KOG1274|consen  101 DLAVSGSGKMIAAGSDDTAVKLLNLDDSSQEKVLRGHDAPVLQLSYDPKGNFLAVSSCDGKVQIWDLQDGILSKTLTG--  178 (933)
T ss_pred             EEEEecCCcEEEeecCceeEEEEeccccchheeecccCCceeeeeEcCCCCEEEEEecCceEEEEEcccchhhhhccc--
Confidence            9999999999997 5678999999999999999999999999999999999999999999999999999876665431  


Q ss_pred             CCCCCCccccccceeeeeccc-ccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee---cCCcEEEEEEcCC
Q psy10867        162 PGSSGKGVTGLTEPLHVKSQH-SLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI---LDTRLTCVAFDGT  237 (343)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~---~~~~i~~~~~~~~  237 (343)
                                   ........ ...+..++|+|++  ..++....|+.|++|+....+....+.   +...+..+.|+|+
T Consensus       179 -------------v~k~n~~~~s~i~~~~aW~Pk~--g~la~~~~d~~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~wsPn  243 (933)
T KOG1274|consen  179 -------------VDKDNEFILSRICTRLAWHPKG--GTLAVPPVDNTVKVYSRKGWELQFKLRDKLSSSKFSDLQWSPN  243 (933)
T ss_pred             -------------CCccccccccceeeeeeecCCC--CeEEeeccCCeEEEEccCCceeheeecccccccceEEEEEcCC
Confidence                         11111111 4567789999998  678888899999999999988887776   3455999999999


Q ss_pred             CCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEE
Q psy10867        238 EDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKI  305 (343)
Q Consensus       238 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~i  305 (343)
                      |+|||+++.+|.|.|||..+.+.               ......|.+++|.|+.+.+-.-...|...+
T Consensus       244 G~YiAAs~~~g~I~vWnv~t~~~---------------~~~~~~Vc~~aw~p~~n~it~~~~~g~~~~  296 (933)
T KOG1274|consen  244 GKYIAASTLDGQILVWNVDTHER---------------HEFKRAVCCEAWKPNANAITLITALGTLGV  296 (933)
T ss_pred             CcEEeeeccCCcEEEEecccchh---------------ccccceeEEEecCCCCCeeEEEeecccccc
Confidence            99999999999999999987322               123467999999998876554444444333

>KOG4283|consensus

Probab=99.96  E-value=1.8e-26  Score=170.69  Aligned_cols=278  Identities=14%  Similarity=0.066  Sum_probs=207.0

Q ss_pred             ecCCCCcceEEEEeC-CceEEEEEcCCCeEEEEeCCCccc------------c---eecccCCcceEEEEECC-CCCEEE
Q psy10867         32 KGASVLSPHSMCLLG-NDYVLGVEKGKPMIQAWPVNSQEK------------A---QLRLICPGRISSMQASP-DAAYIA   94 (343)
Q Consensus        32 ~~~~~~~v~~~~~~~-~~~~~~~~~~~~~i~iw~~~~~~~------------~---~~~~~~~~~v~~~~~s~-~~~~l~   94 (343)
                      ..|.+ .|+++.+.+ .|+++.+|..||.|.+||+++...            +   ....+|.-.|..+.|-| |.-.+.
T Consensus        40 r~HgG-svNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmFt  118 (397)
T KOG4283|consen   40 RPHGG-SVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMFT  118 (397)
T ss_pred             ccCCC-ccceeeeccccceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCceee
Confidence            45667 999999987 579999999999999999976431            0   11236777899999998 333444


Q ss_pred             -EecCCeEEEEEccCCceEEEecccCCCeEEEEEecC---CCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccc
Q psy10867         95 -VSIETKLHMWQISSGRLLATASSHYQPITIVKWSAD---SNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVT  170 (343)
Q Consensus        95 -~~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  170 (343)
                       ++.|.++++||.++-+....++ ..+.|++-+++|-   .-++++|..+-+|++-|+.++.                  
T Consensus       119 ssSFDhtlKVWDtnTlQ~a~~F~-me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs------------------  179 (397)
T KOG4283|consen  119 SSSFDHTLKVWDTNTLQEAVDFK-MEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGS------------------  179 (397)
T ss_pred             cccccceEEEeecccceeeEEee-cCceeehhhcChhhhcceEEEEecCCCcEEEEeccCCc------------------
Confidence             4789999999999888777775 4577899899882   4478888899999999999985                  


Q ss_pred             cccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCC-ceEEEe---------------ecCCcEEEEEE
Q psy10867        171 GLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTG-EDLLSL---------------ILDTRLTCVAF  234 (343)
Q Consensus       171 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~-~~~~~~---------------~~~~~i~~~~~  234 (343)
                          ..+.+.+|.+.|.++.|+|..+ -.|++|+.||.|++||++.. .+...+               .|.+.+..++|
T Consensus       180 ----~sH~LsGHr~~vlaV~Wsp~~e-~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~  254 (397)
T KOG4283|consen  180 ----FSHTLSGHRDGVLAVEWSPSSE-WVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAW  254 (397)
T ss_pred             ----ceeeeccccCceEEEEeccCce-eEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeeee
Confidence                4566779999999999999886 78899999999999999854 222222               25567999999


Q ss_pred             cCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceee
Q psy10867        235 DGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCL  314 (343)
Q Consensus       235 ~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~  314 (343)
                      +.++.++++.+.|.++++|+..++.......   ++....-..|. .+. +. +.+...++---.++.+.++++-.|..+
T Consensus       255 tSd~~~l~~~gtd~r~r~wn~~~G~ntl~~~---g~~~~n~~~~~-~~~-~~-~~~s~vfv~~p~~~~lall~~~sgs~i  328 (397)
T KOG4283|consen  255 TSDARYLASCGTDDRIRVWNMESGRNTLREF---GPIIHNQTTSF-AVH-IQ-SMDSDVFVLFPNDGSLALLNLLEGSFV  328 (397)
T ss_pred             cccchhhhhccCccceEEeecccCccccccc---ccccccccccc-eEE-Ee-ecccceEEEEecCCeEEEEEccCceEE
Confidence            9999999999999999999998876533211   00000000010 111 22 233334444445688999999999998


Q ss_pred             eecc-cCCceEEEEEccCCCeeeeccc
Q psy10867        315 RTIQ-HKGPVLGAFLGLLPPAIHDYDF  340 (343)
Q Consensus       315 ~~~~-~~~~v~~~~~sp~~~~l~~~~~  340 (343)
                      +.+. |...+.+.++-|+=+.+.+++.
T Consensus       329 r~l~~h~k~i~c~~~~~~fq~~~tg~~  355 (397)
T KOG4283|consen  329 RRLSTHLKRINCAAYRPDFEQCFTGDM  355 (397)
T ss_pred             EeeecccceeeEEeecCchhhhhcccc
Confidence            8888 8888899999888777776654

>KOG0267|consensus

Probab=99.96  E-value=3.2e-29  Score=205.78  Aligned_cols=245  Identities=19%  Similarity=0.279  Sum_probs=212.6

Q ss_pred             CeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEE
Q psy10867         15 GAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIA   94 (343)
Q Consensus        15 g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~   94 (343)
                      -.+++||.+      .+-.|.. .+.++..-..++.+++|+.+..+-+|.+.....+..+.+|..+|.++.|+++..+|+
T Consensus        14 t~Lr~~~~~------~~~~hsa-av~~lk~~~s~r~~~~Gg~~~k~~L~~i~kp~~i~S~~~hespIeSl~f~~~E~Lla   86 (825)
T KOG0267|consen   14 TKLRVWDTR------EFVAHSA-AVGCLKIRKSSRSLVTGGEDEKVNLWAIGKPNAITSLTGHESPIESLTFDTSERLLA   86 (825)
T ss_pred             eccccccch------hhhhhhh-hhceeeeeccceeeccCCCceeeccccccCCchhheeeccCCcceeeecCcchhhhc
Confidence            345566643      3445666 777877766788999998888899999887777777889999999999999999988


Q ss_pred             E-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCcccccc
Q psy10867         95 V-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLT  173 (343)
Q Consensus        95 ~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (343)
                      + +.+|+|++||++.++.++++.+|...+..+.|+|-+.++++|+.|+.+++||.+...                     
T Consensus        87 agsasgtiK~wDleeAk~vrtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~G---------------------  145 (825)
T KOG0267|consen   87 AGSASGTIKVWDLEEAKIVRTLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDIRKKG---------------------  145 (825)
T ss_pred             ccccCCceeeeehhhhhhhhhhhccccCcceeeeccceEEeccccccccceehhhhccC---------------------
Confidence            7 578999999999999999999999999999999999999999999999999999643                     


Q ss_pred             ceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEE
Q psy10867        174 EPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKS  252 (343)
Q Consensus       174 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i  252 (343)
                       +...+.+|...+..+.|+|+|  .+++.+++|..+++||+..|+....|. |...+..+.|+|..-+++.|+.|+++++
T Consensus       146 -c~~~~~s~~~vv~~l~lsP~G--r~v~~g~ed~tvki~d~~agk~~~ef~~~e~~v~sle~hp~e~Lla~Gs~d~tv~f  222 (825)
T KOG0267|consen  146 -CSHTYKSHTRVVDVLRLSPDG--RWVASGGEDNTVKIWDLTAGKLSKEFKSHEGKVQSLEFHPLEVLLAPGSSDRTVRF  222 (825)
T ss_pred             -ceeeecCCcceeEEEeecCCC--ceeeccCCcceeeeecccccccccccccccccccccccCchhhhhccCCCCceeee
Confidence             566677899999999999999  899999999999999999999999998 8899999999999999999999999999


Q ss_pred             EEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCC
Q psy10867        253 FCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADE  301 (343)
Q Consensus       253 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg  301 (343)
                      ||+++.+...           ........|.+.+|+|++..+++|....
T Consensus       223 ~dletfe~I~-----------s~~~~~~~v~~~~fn~~~~~~~~G~q~s  260 (825)
T KOG0267|consen  223 WDLETFEVIS-----------SGKPETDGVRSLAFNPDGKIVLSGEQIS  260 (825)
T ss_pred             eccceeEEee-----------ccCCccCCceeeeecCCceeeecCchhh
Confidence            9999765532           3334467899999999999998887653

>KOG2055|consensus

Probab=99.96  E-value=1.6e-26  Score=180.71  Aligned_cols=271  Identities=14%  Similarity=0.216  Sum_probs=209.6

Q ss_pred             eEEEecCCCCeEEEEecCC--ceEEEEEecCCCCcceEEEEeCCce-EEEEEcCCCeEEEEeCCCcccceecc--cCC-c
Q psy10867          6 EVAFSYDGSGAISVWEPKG--GTLLMSYKGASVLSPHSMCLLGNDY-VLGVEKGKPMIQAWPVNSQEKAQLRL--ICP-G   79 (343)
Q Consensus         6 ~~~~s~~~dg~i~iwd~~~--~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~~~~i~iw~~~~~~~~~~~~--~~~-~   79 (343)
                      .++++++-||.++||.+..  ...++.+..... +|.+.+|.|+|. .+++++....+..||+.+.+..+.-.  ++. .
T Consensus       226 plllvaG~d~~lrifqvDGk~N~~lqS~~l~~f-Pi~~a~f~p~G~~~i~~s~rrky~ysyDle~ak~~k~~~~~g~e~~  304 (514)
T KOG2055|consen  226 PLLLVAGLDGTLRIFQVDGKVNPKLQSIHLEKF-PIQKAEFAPNGHSVIFTSGRRKYLYSYDLETAKVTKLKPPYGVEEK  304 (514)
T ss_pred             ceEEEecCCCcEEEEEecCccChhheeeeeccC-ccceeeecCCCceEEEecccceEEEEeeccccccccccCCCCcccc
Confidence            4555666699999998753  456677776666 999999999997 77777776899999999887664322  333 3


Q ss_pred             ceEEEEECCCCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeee
Q psy10867         80 RISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVA  158 (343)
Q Consensus        80 ~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~  158 (343)
                      .+.....+|++++|+. |..|.|.+....+++.+..++ -.+.|..++|+.+++.|++++.+|.|.+||++...+...+.
T Consensus       305 ~~e~FeVShd~~fia~~G~~G~I~lLhakT~eli~s~K-ieG~v~~~~fsSdsk~l~~~~~~GeV~v~nl~~~~~~~rf~  383 (514)
T KOG2055|consen  305 SMERFEVSHDSNFIAIAGNNGHIHLLHAKTKELITSFK-IEGVVSDFTFSSDSKELLASGGTGEVYVWNLRQNSCLHRFV  383 (514)
T ss_pred             hhheeEecCCCCeEEEcccCceEEeehhhhhhhhheee-eccEEeeEEEecCCcEEEEEcCCceEEEEecCCcceEEEEe
Confidence            5778889999999997 899999999999999998886 46789999999999999999999999999999986655432


Q ss_pred             cCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCC------CceEEEee-cCCcEEE
Q psy10867        159 FGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCT------GEDLLSLI-LDTRLTC  231 (343)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~------~~~~~~~~-~~~~i~~  231 (343)
                                           ....-.-++++.++++  .+||+|+..|.|.|||..+      .+++..+. ....|++
T Consensus       384 ---------------------D~G~v~gts~~~S~ng--~ylA~GS~~GiVNIYd~~s~~~s~~PkPik~~dNLtt~Its  440 (514)
T KOG2055|consen  384 ---------------------DDGSVHGTSLCISLNG--SYLATGSDSGIVNIYDGNSCFASTNPKPIKTVDNLTTAITS  440 (514)
T ss_pred             ---------------------ecCccceeeeeecCCC--ceEEeccCcceEEEeccchhhccCCCCchhhhhhhheeeee
Confidence                                 1112233567777888  8999999999999999653      34444444 4678999


Q ss_pred             EEEcCCCCEEEEEcC--CCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecc
Q psy10867        232 VAFDGTEDNIYMGTS--EGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTI  309 (343)
Q Consensus       232 ~~~~~~~~~l~~~~~--d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~  309 (343)
                      +.|+|+.+.|+.++.  ...+++--+.+......+.        .....-+.|+|++|||.+.+||.|..+|.+.+|.+.
T Consensus       441 l~Fn~d~qiLAiaS~~~knalrLVHvPS~TVFsNfP--------~~n~~vg~vtc~aFSP~sG~lAvGNe~grv~l~kL~  512 (514)
T KOG2055|consen  441 LQFNHDAQILAIASRVKKNALRLVHVPSCTVFSNFP--------TSNTKVGHVTCMAFSPNSGYLAVGNEAGRVHLFKLH  512 (514)
T ss_pred             eeeCcchhhhhhhhhccccceEEEeccceeeeccCC--------CCCCcccceEEEEecCCCceEEeecCCCceeeEeec
Confidence            999999999998875  5667777665543322211        112233569999999999999999999999999874

>KOG1273|consensus

Probab=99.96  E-value=1.4e-26  Score=172.84  Aligned_cols=277  Identities=14%  Similarity=0.157  Sum_probs=205.0

Q ss_pred             ceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCCceEEEecc
Q psy10867         39 PHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATASS  117 (343)
Q Consensus        39 v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~  117 (343)
                      -.|+.|++.|.++|.|..+|.|.|||+.+....+.+.+|.-+|.+++||+||+.|++ +.|..|.+||+..|.+++.+. 
T Consensus        26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~rir-  104 (405)
T KOG1273|consen   26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFRIARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKRIR-  104 (405)
T ss_pred             cceEEeccCcceeeeeccCCcEEEEEccccchhhhhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCCceeEEE-
Confidence            479999999999999999999999999999988889999999999999999999887 789999999999999988886 


Q ss_pred             cCCCeEEEEEecCC-CEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCC
Q psy10867        118 HYQPITIVKWSADS-NFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGA  196 (343)
Q Consensus       118 ~~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  196 (343)
                      ..++|+...|+|.. +.++..-.+..-.+-++..+... .+.                 ...-........+..|.+.| 
T Consensus       105 f~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h~-~Lp-----------------~d~d~dln~sas~~~fdr~g-  165 (405)
T KOG1273|consen  105 FDSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKHS-VLP-----------------KDDDGDLNSSASHGVFDRRG-  165 (405)
T ss_pred             ccCccceeeeccccCCeEEEEEecCCcEEEEecCCcee-ecc-----------------CCCccccccccccccccCCC-
Confidence            67899999999933 33333333333444444432100 000                 00000011112223577888 


Q ss_pred             ceEEEEeeCCCeEEEEecCCCceEEEeecC--CcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCc
Q psy10867        197 KSRVASVSHDRTCKIFDLCTGEDLLSLILD--TRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPD  274 (343)
Q Consensus       197 ~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~--~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~  274 (343)
                       +++++|...|.+.++|..+.+++..++..  ..|.++.++..|+.|+.-+.|..|+.|+++.......-  ...++...
T Consensus       166 -~yIitGtsKGkllv~~a~t~e~vas~rits~~~IK~I~~s~~g~~liiNtsDRvIR~ye~~di~~~~r~--~e~e~~~K  242 (405)
T KOG1273|consen  166 -KYIITGTSKGKLLVYDAETLECVASFRITSVQAIKQIIVSRKGRFLIINTSDRVIRTYEISDIDDEGRD--GEVEPEHK  242 (405)
T ss_pred             -CEEEEecCcceEEEEecchheeeeeeeechheeeeEEEEeccCcEEEEecCCceEEEEehhhhcccCcc--CCcChhHH
Confidence             89999999999999999999999888843  57999999999999999999999999998743221000  00000111


Q ss_pred             ccc--ccCcEEEEEEccCCCEEEEEeC-CCcEEEEecccceeeeecc-cC-CceEEEEEccCCCeeeec
Q psy10867        275 FIG--HEKQVTSLSCSITGITLLSSSA-DETLKIWHTISRQCLRTIQ-HK-GPVLGAFLGLLPPAIHDY  338 (343)
Q Consensus       275 ~~~--~~~~v~~~~~s~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~-~~-~~v~~~~~sp~~~~l~~~  338 (343)
                      ++.  ....-.+++||.+|.|++.++. ...++||.-..|.+++.+. .. ....++.|+|-...|++-
T Consensus       243 ~qDvVNk~~Wk~ccfs~dgeYv~a~s~~aHaLYIWE~~~GsLVKILhG~kgE~l~DV~whp~rp~i~si  311 (405)
T KOG1273|consen  243 LQDVVNKLQWKKCCFSGDGEYVCAGSARAHALYIWEKSIGSLVKILHGTKGEELLDVNWHPVRPIIASI  311 (405)
T ss_pred             HHHHHhhhhhhheeecCCccEEEeccccceeEEEEecCCcceeeeecCCchhheeecccccceeeeeec
Confidence            111  1223467889999999987764 4579999999999999998 44 567888999987777653

>KOG0646|consensus

Probab=99.96  E-value=8.2e-27  Score=182.43  Aligned_cols=243  Identities=18%  Similarity=0.184  Sum_probs=197.1

Q ss_pred             CCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCC
Q psy10867         12 DGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAA   91 (343)
Q Consensus        12 ~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~   91 (343)
                      -+...|.+|.+..........--.+ +|.+++-+|+|.++++|.-.|.|++|.+.+|..+..+..|-..|+++.|+-||.
T Consensus        58 ~~rp~l~vw~i~k~~~~~q~~v~Pg-~v~al~s~n~G~~l~ag~i~g~lYlWelssG~LL~v~~aHYQ~ITcL~fs~dgs  136 (476)
T KOG0646|consen   58 LKRPLLHVWEILKKDQVVQYIVLPG-PVHALASSNLGYFLLAGTISGNLYLWELSSGILLNVLSAHYQSITCLKFSDDGS  136 (476)
T ss_pred             ccCccccccccCchhhhhhhccccc-ceeeeecCCCceEEEeecccCcEEEEEeccccHHHHHHhhccceeEEEEeCCCc
Confidence            3356788999876555553333445 899999999999999997779999999999999988999999999999999999


Q ss_pred             EEEE-ecCCeEEEEEcc---------CCceEEEecccCCCeEEEEEecC--CCEEEEecCCCeEEEeecCccceeeeeec
Q psy10867         92 YIAV-SIETKLHMWQIS---------SGRLLATASSHYQPITIVKWSAD--SNFIVTGGEDGTICVWQLSRLICKQTVAF  159 (343)
Q Consensus        92 ~l~~-~~d~~i~v~~~~---------~~~~~~~~~~~~~~v~~~~~~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~  159 (343)
                      ++++ |.||.|.+|.+.         +-+++..+..|.-+|+++...+.  ..++++++.|.++++||+..+..+.++. 
T Consensus       137 ~iiTgskDg~V~vW~l~~lv~a~~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~LLlti~-  215 (476)
T KOG0646|consen  137 HIITGSKDGAVLVWLLTDLVSADNDHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLGVLLLTIT-  215 (476)
T ss_pred             EEEecCCCccEEEEEEEeecccccCCCccceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEeccceeeEEEe-
Confidence            9997 789999999864         23567888999999999998763  4589999999999999999986655443 


Q ss_pred             CCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCc----------------eEEEe
Q psy10867        160 GIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGE----------------DLLSL  223 (343)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~----------------~~~~~  223 (343)
                                            ....+.+++++|.+  ..++.|+.+|.|.+.++....                ....+
T Consensus       216 ----------------------fp~si~av~lDpae--~~~yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~  271 (476)
T KOG0646|consen  216 ----------------------FPSSIKAVALDPAE--RVVYIGTEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVL  271 (476)
T ss_pred             ----------------------cCCcceeEEEcccc--cEEEecCCcceEEeeehhcCCcccccccccccccccceeeee
Confidence                                  55689999999998  899999999999998875432                11222


Q ss_pred             e-cC--CcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCC
Q psy10867        224 I-LD--TRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITG  291 (343)
Q Consensus       224 ~-~~--~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~  291 (343)
                      . |.  ..|+|++++-||..|++|+.||+|.+||..+.+..+           ++..-.++|+.+.+.|-.
T Consensus       272 ~Gh~~~~~ITcLais~DgtlLlSGd~dg~VcvWdi~S~Q~iR-----------tl~~~kgpVtnL~i~~~~  331 (476)
T KOG0646|consen  272 VGHENESAITCLAISTDGTLLLSGDEDGKVCVWDIYSKQCIR-----------TLQTSKGPVTNLQINPLE  331 (476)
T ss_pred             ccccCCcceeEEEEecCccEEEeeCCCCCEEEEecchHHHHH-----------HHhhhccccceeEeeccc
Confidence            2 33  389999999999999999999999999998865533           333356788888886643

>KOG0269|consensus

Probab=99.96  E-value=6.6e-28  Score=199.52  Aligned_cols=241  Identities=15%  Similarity=0.171  Sum_probs=198.8

Q ss_pred             cceEEEEeC-CceEEEEEcCCCeEEEEeCCC---cccceecccCCcceEEEEECCCC-CEEEE-ecCCeEEEEEccCCce
Q psy10867         38 SPHSMCLLG-NDYVLGVEKGKPMIQAWPVNS---QEKAQLRLICPGRISSMQASPDA-AYIAV-SIETKLHMWQISSGRL  111 (343)
Q Consensus        38 ~v~~~~~~~-~~~~~~~~~~~~~i~iw~~~~---~~~~~~~~~~~~~v~~~~~s~~~-~~l~~-~~d~~i~v~~~~~~~~  111 (343)
                      .+..+.|.. +..++|+++..|.|.+||+..   .+.+..+..|...++++.|++-. .+|++ +.||.|++||++....
T Consensus        89 S~~DVkW~~~~~NlIAT~s~nG~i~vWdlnk~~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S  168 (839)
T KOG0269|consen   89 SAADVKWGQLYSNLIATCSTNGVISVWDLNKSIRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKS  168 (839)
T ss_pred             ehhhcccccchhhhheeecCCCcEEEEecCccccchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeecccc
Confidence            455667763 357888888889999999987   45556788999999999999865 45555 6899999999999988


Q ss_pred             EEEecccCCCeEEEEEec-CCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEE
Q psy10867        112 LATASSHYQPITIVKWSA-DSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVT  190 (343)
Q Consensus       112 ~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  190 (343)
                      ..++.+....|..+.|+| .+..|+++.+.|.+.+||++...                     .....+.+|.++|.++.
T Consensus       169 ~~t~~~nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~---------------------r~~~k~~AH~GpV~c~n  227 (839)
T KOG0269|consen  169 KSTFRSNSESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPD---------------------RCEKKLTAHNGPVLCLN  227 (839)
T ss_pred             cccccccchhhhceeeccCCCceEEEecCCceEEEeeccCch---------------------hHHHHhhcccCceEEEe
Confidence            888988889999999999 77899999999999999999853                     36667789999999999


Q ss_pred             eecCCCceEEEEeeCCCeEEEEecCCCc--eEEEeecCCcEEEEEEcCCCCE-EEEEc--CCCcEEEEEeeccccccccc
Q psy10867        191 LSKLGAKSRVASVSHDRTCKIFDLCTGE--DLLSLILDTRLTCVAFDGTEDN-IYMGT--SEGVIKSFCLRQVPRTRDHH  265 (343)
Q Consensus       191 ~~~~~~~~~l~~~~~d~~i~~wd~~~~~--~~~~~~~~~~i~~~~~~~~~~~-l~~~~--~d~~i~i~d~~~~~~~~~~~  265 (343)
                      |+|+.  .+||+|+.|+.|+|||..+.+  .+.++....++.++.|-|...+ |++++  .|-.|+|||++....+    
T Consensus       228 whPnr--~~lATGGRDK~vkiWd~t~~~~~~~~tInTiapv~rVkWRP~~~~hLAtcsmv~dtsV~VWDvrRPYIP----  301 (839)
T KOG0269|consen  228 WHPNR--EWLATGGRDKMVKIWDMTDSRAKPKHTINTIAPVGRVKWRPARSYHLATCSMVVDTSVHVWDVRRPYIP----  301 (839)
T ss_pred             ecCCC--ceeeecCCCccEEEEeccCCCccceeEEeecceeeeeeeccCccchhhhhhccccceEEEEeecccccc----
Confidence            99987  899999999999999998654  4556667889999999998765 45543  3778999999976544    


Q ss_pred             ccCCCCCCccccccCcEEEEEEcc-CCCEEEEEeCCCcEEEEecccc
Q psy10867        266 IQDSTSNPDFIGHEKQVTSLSCSI-TGITLLSSSADETLKIWHTISR  311 (343)
Q Consensus       266 ~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~s~~~dg~i~iwd~~~~  311 (343)
                            ...+..|...++.++|.. |...+.+++.||.|..-.++++
T Consensus       302 ------~~t~~eH~~~vt~i~W~~~d~~~l~s~sKD~tv~qh~~kna  342 (839)
T KOG0269|consen  302 ------YATFLEHTDSVTGIAWDSGDRINLWSCSKDGTVLQHLFKNA  342 (839)
T ss_pred             ------ceeeeccCccccceeccCCCceeeEeecCccHHHHhhhhcc
Confidence                  456788999999999966 4557889999998866555443

>KOG4283|consensus

Probab=99.96  E-value=2.7e-26  Score=169.83  Aligned_cols=279  Identities=18%  Similarity=0.263  Sum_probs=205.4

Q ss_pred             ceEEEecCCCCeEEEEecCCceE------E----E-----EEecCCCCcceEEEEeC-CceEEEEEcCCCeEEEEeCCCc
Q psy10867          5 NEVAFSYDGSGAISVWEPKGGTL------L----M-----SYKGASVLSPHSMCLLG-NDYVLGVEKGKPMIQAWPVNSQ   68 (343)
Q Consensus         5 ~~~~~s~~~dg~i~iwd~~~~~~------~----~-----~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~i~iw~~~~~   68 (343)
                      ....+|++.||.|.+||++....      +    .     .-.+|+- .|.++.|-| |.-++++++-|.++++||.++.
T Consensus        56 grymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky-~iss~~WyP~DtGmFtssSFDhtlKVWDtnTl  134 (397)
T KOG4283|consen   56 GRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKY-AISSAIWYPIDTGMFTSSSFDHTLKVWDTNTL  134 (397)
T ss_pred             ceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCcccee-eeeeeEEeeecCceeecccccceEEEeecccc
Confidence            45688999999999999975321      1    1     1124555 899999998 4456677777799999999998


Q ss_pred             ccceecccCCcceEEEEECCC---CCEEEEec-CCeEEEEEccCCceEEEecccCCCeEEEEEecCCC-EEEEecCCCeE
Q psy10867         69 EKAQLRLICPGRISSMQASPD---AAYIAVSI-ETKLHMWQISSGRLLATASSHYQPITIVKWSADSN-FIVTGGEDGTI  143 (343)
Q Consensus        69 ~~~~~~~~~~~~v~~~~~s~~---~~~l~~~~-d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~dg~i  143 (343)
                      +....+ ..++.|++-++||=   ..++|++. +-.|++-|+.+|...+++.+|.+.|.++.|+|... .|++|+.||.|
T Consensus       135 Q~a~~F-~me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~LsGHr~~vlaV~Wsp~~e~vLatgsaDg~i  213 (397)
T KOG4283|consen  135 QEAVDF-KMEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTLSGHRDGVLAVEWSPSSEWVLATGSADGAI  213 (397)
T ss_pred             eeeEEe-ecCceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeeeccccCceEEEEeccCceeEEEecCCCceE
Confidence            876554 55778999999983   34666664 55999999999999999999999999999999766 57889999999


Q ss_pred             EEeecCcc-ceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEE
Q psy10867        144 CVWQLSRL-ICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLS  222 (343)
Q Consensus       144 ~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~  222 (343)
                      ++||++.. .+...+..-.        ......++....|.+.+..++|..++  .++++.+.|..+++|+..+|+....
T Consensus       214 rlWDiRrasgcf~~lD~hn--------~k~~p~~~~n~ah~gkvngla~tSd~--~~l~~~gtd~r~r~wn~~~G~ntl~  283 (397)
T KOG4283|consen  214 RLWDIRRASGCFRVLDQHN--------TKRPPILKTNTAHYGKVNGLAWTSDA--RYLASCGTDDRIRVWNMESGRNTLR  283 (397)
T ss_pred             EEEEeecccceeEEeeccc--------CccCccccccccccceeeeeeecccc--hhhhhccCccceEEeecccCccccc
Confidence            99999875 3333322100        01111233456799999999999999  8999999999999999988864321


Q ss_pred             -ee---cCC----cEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEE
Q psy10867        223 -LI---LDT----RLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITL  294 (343)
Q Consensus       223 -~~---~~~----~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l  294 (343)
                       +.   ++.    .+. +. +.+...++.--.++.+.++.+-.+..           +..+..|-..+.+.++.|+-+..
T Consensus       284 ~~g~~~~n~~~~~~~~-~~-~~~s~vfv~~p~~~~lall~~~sgs~-----------ir~l~~h~k~i~c~~~~~~fq~~  350 (397)
T KOG4283|consen  284 EFGPIIHNQTTSFAVH-IQ-SMDSDVFVLFPNDGSLALLNLLEGSF-----------VRRLSTHLKRINCAAYRPDFEQC  350 (397)
T ss_pred             ccccccccccccceEE-Ee-ecccceEEEEecCCeEEEEEccCceE-----------EEeeecccceeeEEeecCchhhh
Confidence             11   111    111 22 22333333334457788887766544           44567788889999999999999


Q ss_pred             EEEeCCCcEEEEec
Q psy10867        295 LSSSADETLKIWHT  308 (343)
Q Consensus       295 ~s~~~dg~i~iwd~  308 (343)
                      .++..|+.|..|-.
T Consensus       351 ~tg~~d~ni~~w~p  364 (397)
T KOG4283|consen  351 FTGDMNGNIYMWSP  364 (397)
T ss_pred             hccccCCccccccc
Confidence            99999999999976

>KOG0302|consensus

Probab=99.96  E-value=5e-27  Score=179.02  Aligned_cols=206  Identities=20%  Similarity=0.282  Sum_probs=168.9

Q ss_pred             cCCcceEEEEECCCC--CEEEE-ecCCeEEEEEccC----------------CceEEEecccCCCeEEEEEec-CCCEEE
Q psy10867         76 ICPGRISSMQASPDA--AYIAV-SIETKLHMWQISS----------------GRLLATASSHYQPITIVKWSA-DSNFIV  135 (343)
Q Consensus        76 ~~~~~v~~~~~s~~~--~~l~~-~~d~~i~v~~~~~----------------~~~~~~~~~~~~~v~~~~~~~-~~~~l~  135 (343)
                      .|.+.++.+.-++-+  .+.|+ +..|.|+||++..                .+++.++.+|.+.=+.++|+| ....|+
T Consensus       149 ~h~g~~NRvr~~~~~~~~~~aswse~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~ghk~EGy~LdWSp~~~g~Ll  228 (440)
T KOG0302|consen  149 PHYGGINRVRVSRLGNEVLCASWSENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFNGHKGEGYGLDWSPIKTGRLL  228 (440)
T ss_pred             ccccccceeeecccCCcceeeeecccCcEEEEEchhhhhhhcCccccccccccCceEEecccCccceeeecccccccccc
Confidence            667778888777654  34444 6789999999752                256778889999999999999 223578


Q ss_pred             EecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecC
Q psy10867        136 TGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLC  215 (343)
Q Consensus       136 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~  215 (343)
                      +|.--+.|++|...++.-..                   -...+.+|...|..++|+|... ..|++++.||+|+|||+|
T Consensus       229 sGDc~~~I~lw~~~~g~W~v-------------------d~~Pf~gH~~SVEDLqWSptE~-~vfaScS~DgsIrIWDiR  288 (440)
T KOG0302|consen  229 SGDCVKGIHLWEPSTGSWKV-------------------DQRPFTGHTKSVEDLQWSPTED-GVFASCSCDGSIRIWDIR  288 (440)
T ss_pred             cCccccceEeeeeccCceee-------------------cCccccccccchhhhccCCccC-ceEEeeecCceEEEEEec
Confidence            88888899999998853221                   2234456999999999999876 799999999999999999


Q ss_pred             CC---ceEEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccC-C
Q psy10867        216 TG---EDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSIT-G  291 (343)
Q Consensus       216 ~~---~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-~  291 (343)
                      .+   .++..-.|++.|+.+.|+.+..+|++|+.||+++|||++..+.        +.++..++-|..+|+++.|+|. .
T Consensus       289 s~~~~~~~~~kAh~sDVNVISWnr~~~lLasG~DdGt~~iwDLR~~~~--------~~pVA~fk~Hk~pItsieW~p~e~  360 (440)
T KOG0302|consen  289 SGPKKAAVSTKAHNSDVNVISWNRREPLLASGGDDGTLSIWDLRQFKS--------GQPVATFKYHKAPITSIEWHPHED  360 (440)
T ss_pred             CCCccceeEeeccCCceeeEEccCCcceeeecCCCceEEEEEhhhccC--------CCcceeEEeccCCeeEEEeccccC
Confidence            88   4455555889999999999999999999999999999998654        3558889999999999999995 4


Q ss_pred             CEEEEEeCCCcEEEEecc
Q psy10867        292 ITLLSSSADETLKIWHTI  309 (343)
Q Consensus       292 ~~l~s~~~dg~i~iwd~~  309 (343)
                      ..|++++.|..|.+||+.
T Consensus       361 s~iaasg~D~QitiWDls  378 (440)
T KOG0302|consen  361 SVIAASGEDNQITIWDLS  378 (440)
T ss_pred             ceEEeccCCCcEEEEEee
Confidence            578899999999999985

>KOG2919|consensus

Probab=99.96  E-value=4.1e-26  Score=170.85  Aligned_cols=275  Identities=15%  Similarity=0.145  Sum_probs=206.4

Q ss_pred             cceEEEEeCCceEEEEEcCCCeEEEEeCCCccc-------------ceecccCCcceEEEEEC-------CCCCEEEE-e
Q psy10867         38 SPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEK-------------AQLRLICPGRISSMQAS-------PDAAYIAV-S   96 (343)
Q Consensus        38 ~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~-------------~~~~~~~~~~v~~~~~s-------~~~~~l~~-~   96 (343)
                      -.....|+|||..+.+.+.|..+++|++...-.             ..........|....|-       |+..++++ +
T Consensus        51 f~kgckWSPDGSciL~~sedn~l~~~nlP~dlys~~~~~~~~~~~~~~~r~~eg~tvydy~wYs~M~s~qP~t~l~a~ss  130 (406)
T KOG2919|consen   51 FLKGCKWSPDGSCILSLSEDNCLNCWNLPFDLYSKKADGPLNFSKHLSYRYQEGETVYDYCWYSRMKSDQPSTNLFAVSS  130 (406)
T ss_pred             hhccceeCCCCceEEeecccCeeeEEecChhhcccCCCCccccccceeEEeccCCEEEEEEeeeccccCCCccceeeecc
Confidence            456789999998888888889999999753211             11112334557777764       56667776 6


Q ss_pred             cCCeEEEEEccCCceEEEecc--cCC---CeEEEEEecCCCEEEEecCCCeEEEeecCc-cceeeeeecCCCCCCCCccc
Q psy10867         97 IETKLHMWQISSGRLLATASS--HYQ---PITIVKWSADSNFIVTGGEDGTICVWQLSR-LICKQTVAFGIPGSSGKGVT  170 (343)
Q Consensus        97 ~d~~i~v~~~~~~~~~~~~~~--~~~---~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~  170 (343)
                      .+.-|++||.-+|+....+.+  |..   ...+++|+|||.+|++|-. ..|+++|+.. +..-....            
T Consensus       131 r~~PIh~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlfaGyk-rcirvFdt~RpGr~c~vy~------------  197 (406)
T KOG2919|consen  131 RDQPIHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLFAGYK-RCIRVFDTSRPGRDCPVYT------------  197 (406)
T ss_pred             ccCceeeeeccccccccchhhhhhHHhhhhheeEEecCCCCeEeeccc-ceEEEeeccCCCCCCcchh------------
Confidence            789999999999998877764  333   3468999999999988665 7899999943 32211110            


Q ss_pred             cccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCCEEEEEcC-CC
Q psy10867        171 GLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIYMGTS-EG  248 (343)
Q Consensus       171 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~-d~  248 (343)
                         ...+-..+..+-+.+++|+|... ..++.++....+-||.-..++++..+. |.+.|+.++|.++|+.|++|.. +.
T Consensus       198 ---t~~~~k~gq~giisc~a~sP~~~-~~~a~gsY~q~~giy~~~~~~pl~llggh~gGvThL~~~edGn~lfsGaRk~d  273 (406)
T KOG2919|consen  198 ---TVTKGKFGQKGIISCFAFSPMDS-KTLAVGSYGQRVGIYNDDGRRPLQLLGGHGGGVTHLQWCEDGNKLFSGARKDD  273 (406)
T ss_pred             ---hhhcccccccceeeeeeccCCCC-cceeeecccceeeeEecCCCCceeeecccCCCeeeEEeccCcCeecccccCCC
Confidence               01111234467789999999875 689999999999999877777777765 7889999999999999999876 78


Q ss_pred             cEEEEEeecccccccccccCCCCCCccccccC-c--EEEEEEccCCCEEEEEeCCCcEEEEeccc-ceeeeecc-cCCce
Q psy10867        249 VIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEK-Q--VTSLSCSITGITLLSSSADETLKIWHTIS-RQCLRTIQ-HKGPV  323 (343)
Q Consensus       249 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~--v~~~~~s~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~-~~~~v  323 (343)
                      .|..||++....+          +..+..|.. .  -.-....|++++|++|+.||.|++||+++ |.....+. +...+
T Consensus       274 kIl~WDiR~~~~p----------v~~L~rhv~~TNQRI~FDld~~~~~LasG~tdG~V~vwdlk~~gn~~sv~~~~sd~v  343 (406)
T KOG2919|consen  274 KILCWDIRYSRDP----------VYALERHVGDTNQRILFDLDPKGEILASGDTDGSVRVWDLKDLGNEVSVTGNYSDTV  343 (406)
T ss_pred             eEEEEeehhccch----------hhhhhhhccCccceEEEecCCCCceeeccCCCccEEEEecCCCCCcccccccccccc
Confidence            9999999975433          444555544 1  12245578999999999999999999998 77666666 88999


Q ss_pred             EEEEEccCCCeeeecc
Q psy10867        324 LGAFLGLLPPAIHDYD  339 (343)
Q Consensus       324 ~~~~~sp~~~~l~~~~  339 (343)
                      +.++++|--+.+++++
T Consensus       344 NgvslnP~mpilatss  359 (406)
T KOG2919|consen  344 NGVSLNPIMPILATSS  359 (406)
T ss_pred             cceecCcccceeeecc
Confidence            9999999988888765

>KOG2445|consensus

Probab=99.96  E-value=8.1e-26  Score=168.10  Aligned_cols=287  Identities=13%  Similarity=0.172  Sum_probs=203.6

Q ss_pred             ecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCc----ccceecccCCcceEEEEECC--CCCEEEE-ecCCeEEEE
Q psy10867         32 KGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQ----EKAQLRLICPGRISSMQASP--DAAYIAV-SIETKLHMW  104 (343)
Q Consensus        32 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~----~~~~~~~~~~~~v~~~~~s~--~~~~l~~-~~d~~i~v~  104 (343)
                      .+|.+ -|+++.|.+-|+.+|+++.|++++|||.+..    .+......|.+.|..+.|.+  -|+.+|+ +.|+++.||
T Consensus        10 s~h~D-lihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iW   88 (361)
T KOG2445|consen   10 SGHKD-LIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIW   88 (361)
T ss_pred             cCCcc-eeeeeeecccCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceeee
Confidence            35777 8999999999999999999999999996543    23345568999999999976  4788887 789999999


Q ss_pred             EccCC---------ceEEEecccCCCeEEEEEec--CCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCcccccc
Q psy10867        105 QISSG---------RLLATASSHYQPITIVKWSA--DSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLT  173 (343)
Q Consensus       105 ~~~~~---------~~~~~~~~~~~~v~~~~~~~--~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (343)
                      .-...         ....++......|+.++|.|  -|-.+++++.||.++||+..........++....         .
T Consensus        89 EE~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei---------~  159 (361)
T KOG2445|consen   89 EEQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQHEI---------Q  159 (361)
T ss_pred             eecccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhhhhh---------h
Confidence            85211         12345666778999999999  5668999999999999998765443332210000         0


Q ss_pred             ceeeeecccccceEEEEeecCCC-ceEEEEeeCC-----CeEEEEecCCCc-e---EEEe-ecCCcEEEEEEcCCC----
Q psy10867        174 EPLHVKSQHSLPVTHVTLSKLGA-KSRVASVSHD-----RTCKIFDLCTGE-D---LLSL-ILDTRLTCVAFDGTE----  238 (343)
Q Consensus       174 ~~~~~~~~~~~~v~~~~~~~~~~-~~~l~~~~~d-----~~i~~wd~~~~~-~---~~~~-~~~~~i~~~~~~~~~----  238 (343)
                      ........+..+..|+.|+|... ..+|+.|+.+     +.++||...... .   +.++ .+..+|+.++|.|+-    
T Consensus       160 ~~~~pp~~~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d~~dpI~di~wAPn~Gr~y  239 (361)
T KOG2445|consen  160 NVIDPPGKNKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPDHTDPIRDISWAPNIGRSY  239 (361)
T ss_pred             hccCCcccccCcceEEeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhcCCCCCcceeeeeccccCCce
Confidence            01112234677888999987532 1567777765     478888765443 2   2222 268899999999963    


Q ss_pred             CEEEEEcCCCcEEEEEeecccccccc---------cccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecc
Q psy10867        239 DNIYMGTSEGVIKSFCLRQVPRTRDH---------HIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTI  309 (343)
Q Consensus       239 ~~l~~~~~d~~i~i~d~~~~~~~~~~---------~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~  309 (343)
                      ..|++++.|| |+||.+.......+.         .-..-..+..+.+|++.|..+.|+-.|..|++.+.||.||+|...
T Consensus       240 ~~lAvA~kDg-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wNmtGtiLsStGdDG~VRLWkan  318 (361)
T KOG2445|consen  240 HLLAVATKDG-VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWNMTGTILSSTGDDGCVRLWKAN  318 (361)
T ss_pred             eeEEEeecCc-EEEEEEeeccchhhhhcccCCCCccccceEEeeeccCCCCceEEEEEeeeeeEEeecCCCceeeehhhh
Confidence            5789999999 999999853211100         001112255678999999999999999999999999999999753


Q ss_pred             ---cceeeeecccCCceEEEEEc
Q psy10867        310 ---SRQCLRTIQHKGPVLGAFLG  329 (343)
Q Consensus       310 ---~~~~~~~~~~~~~v~~~~~s  329 (343)
                         ..++...++..+.+....|+
T Consensus       319 y~n~~kC~sv~~~e~~~~~~~~~  341 (361)
T KOG2445|consen  319 YNNLWKCTSVLKAEGSVTKPDFS  341 (361)
T ss_pred             hhhhheeeeEEeccCCCCCcccc
Confidence               33566666655555555554

>KOG0321|consensus

Probab=99.95  E-value=1.1e-26  Score=188.42  Aligned_cols=280  Identities=18%  Similarity=0.210  Sum_probs=200.1

Q ss_pred             EEEeC---CceEEEEEcCCCeEEEEeCCCcccc------eecccCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCCce
Q psy10867         42 MCLLG---NDYVLGVEKGKPMIQAWPVNSQEKA------QLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGRL  111 (343)
Q Consensus        42 ~~~~~---~~~~~~~~~~~~~i~iw~~~~~~~~------~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~  111 (343)
                      ..|++   ...+|+.+.++|.|.++|.......      .....|...|..+.|-|....|++ +.|.++++||++++++
T Consensus        55 ~sFs~~~n~eHiLavadE~G~i~l~dt~~~~fr~ee~~lk~~~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s~l  134 (720)
T KOG0321|consen   55 DSFSAAPNKEHILAVADEDGGIILFDTKSIVFRLEERQLKKPLAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTSRL  134 (720)
T ss_pred             ccccCCCCccceEEEecCCCceeeecchhhhcchhhhhhcccccccceeEeeccCCCceeEEEccCCceeeeeeecccee
Confidence            55653   3589999999999999998654322      445589999999999995555665 7899999999999988


Q ss_pred             EEE--ecccCCCeEEEEEec-CCCEEEEecCCCeEEEeecCccceeeeeecCCC--CCC---CCccccccceeeeecccc
Q psy10867        112 LAT--ASSHYQPITIVKWSA-DSNFIVTGGEDGTICVWQLSRLICKQTVAFGIP--GSS---GKGVTGLTEPLHVKSQHS  183 (343)
Q Consensus       112 ~~~--~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~--~~~---~~~~~~~~~~~~~~~~~~  183 (343)
                      ...  +.+|.+.|.+++|.| +...|++|+.||.|.|||++-........+...  +..   ........+.+.....+.
T Consensus       135 ~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s  214 (720)
T KOG0321|consen  135 VGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAAS  214 (720)
T ss_pred             ecceeecccccccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhcccccccccc
Confidence            776  889999999999999 556899999999999999986542211111100  000   011222223334444555


Q ss_pred             cceEE---EEeecCCCceEEEEeeC-CCeEEEEecCCCceEEEee---------c---CCcEEEEEEcCCCCEEEEEcCC
Q psy10867        184 LPVTH---VTLSKLGAKSRVASVSH-DRTCKIFDLCTGEDLLSLI---------L---DTRLTCVAFDGTEDNIYMGTSE  247 (343)
Q Consensus       184 ~~v~~---~~~~~~~~~~~l~~~~~-d~~i~~wd~~~~~~~~~~~---------~---~~~i~~~~~~~~~~~l~~~~~d  247 (343)
                      ..|.+   +.+..|.  ..|++++. |+.|+|||+++........         +   .-.+.++..+..|.+|++.+.|
T Consensus       215 ~ti~ssvTvv~fkDe--~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~AsCtD  292 (720)
T KOG0321|consen  215 NTIFSSVTVVLFKDE--STLASAGAADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFASCTD  292 (720)
T ss_pred             CceeeeeEEEEEecc--ceeeeccCCCcceEEEeecccccccccCCCcccCccCcccceeeeEEEEecCCCCeEEEEecC
Confidence            55555   5555555  68888887 9999999999765433221         1   2347888888889999999999


Q ss_pred             CcEEEEEeecccccccccccCCCCCCccccccCcEE--EEEEccCCCEEEEEeCCCcEEEEecccceeeeec-c-cCCce
Q psy10867        248 GVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVT--SLSCSITGITLLSSSADETLKIWHTISRQCLRTI-Q-HKGPV  323 (343)
Q Consensus       248 ~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~-~-~~~~v  323 (343)
                      +.|++|++.......         +..+.++...-.  .-..+||+.++++|+.|...++|.+.+-+.--.+ . |.-.|
T Consensus       293 ~sIy~ynm~s~s~sP---------~~~~sg~~~~sf~vks~lSpd~~~l~SgSsd~~ayiw~vs~~e~~~~~l~Ght~eV  363 (720)
T KOG0321|consen  293 NSIYFYNMRSLSISP---------VAEFSGKLNSSFYVKSELSPDDCSLLSGSSDEQAYIWVVSSPEAPPALLLGHTREV  363 (720)
T ss_pred             CcEEEEeccccCcCc---------hhhccCcccceeeeeeecCCCCceEeccCCCcceeeeeecCccCChhhhhCcceEE
Confidence            999999998755432         333444332211  2246899999999999999999999876543333 3 88899


Q ss_pred             EEEEEccCC
Q psy10867        324 LGAFLGLLP  332 (343)
Q Consensus       324 ~~~~~sp~~  332 (343)
                      ++++|.|..
T Consensus       364 t~V~w~pS~  372 (720)
T KOG0321|consen  364 TTVRWLPSA  372 (720)
T ss_pred             EEEeecccc
Confidence            999998754

>KOG1063|consensus

Probab=99.95  E-value=8.5e-26  Score=184.95  Aligned_cols=299  Identities=17%  Similarity=0.195  Sum_probs=220.5

Q ss_pred             cCCCCeEEEEecCC--ceEEEEEecCCCCcceEEEEeC---CceEEEEEcCCCeEEEEeCCCcc----------------
Q psy10867         11 YDGSGAISVWEPKG--GTLLMSYKGASVLSPHSMCLLG---NDYVLGVEKGKPMIQAWPVNSQE----------------   69 (343)
Q Consensus        11 ~~~dg~i~iwd~~~--~~~~~~~~~~~~~~v~~~~~~~---~~~~~~~~~~~~~i~iw~~~~~~----------------   69 (343)
                      ++.+..|.++.-..  -+.+..++||.+ .|++++|..   +..++++++.|..||||.+.-+.                
T Consensus       165 Ggs~~~v~~~s~~~d~f~~v~el~GH~D-WIrsl~f~~~~~~~~~laS~SQD~yIRiW~i~~~~~~~~~~~e~~~t~~~~  243 (764)
T KOG1063|consen  165 GGSKFVVDLYSSSADSFARVAELEGHTD-WIRSLAFARLGGDDLLLASSSQDRYIRIWRIVLGDDEDSNEREDSLTTLSN  243 (764)
T ss_pred             cCcceEEEEeccCCcceeEEEEeeccch-hhhhhhhhccCCCcEEEEecCCceEEEEEEEEecCCccccccccccccccC
Confidence            34456677776443  366788999999 999999985   35799999999999999863221                


Q ss_pred             --------cc-------eecccCCcceEEEEECCCC-CEEEEecCCeEEEEEccCCc--e-----EEEecccCCCeEEEE
Q psy10867         70 --------KA-------QLRLICPGRISSMQASPDA-AYIAVSIETKLHMWQISSGR--L-----LATASSHYQPITIVK  126 (343)
Q Consensus        70 --------~~-------~~~~~~~~~v~~~~~s~~~-~~l~~~~d~~i~v~~~~~~~--~-----~~~~~~~~~~v~~~~  126 (343)
                              .+       ..+.+|.+-|+++.|+|.+ .+|.++.|.++.+|...+..  -     +..+.+..+......
T Consensus       244 ~~~f~~l~~i~~~is~eall~GHeDWV~sv~W~p~~~~LLSASaDksmiiW~pd~~tGiWv~~vRlGe~gg~a~GF~g~l  323 (764)
T KOG1063|consen  244 LPVFMILEEIQYRISFEALLMGHEDWVYSVWWHPEGLDLLSASADKSMIIWKPDENTGIWVDVVRLGEVGGSAGGFWGGL  323 (764)
T ss_pred             CceeeeeeeEEEEEehhhhhcCcccceEEEEEccchhhheecccCcceEEEecCCccceEEEEEEeecccccccceeeEE
Confidence                    01       1234899999999999999 56666899999999876542  1     222334455688999


Q ss_pred             EecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCC
Q psy10867        127 WSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHD  206 (343)
Q Consensus       127 ~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d  206 (343)
                      |+|+++.+++-+.-|..++|.......                   +.......+|...|+.++|.|.|  .+|++.+.|
T Consensus       324 w~~n~~~ii~~g~~Gg~hlWkt~d~~~-------------------w~~~~~iSGH~~~V~dv~W~psG--eflLsvs~D  382 (764)
T KOG1063|consen  324 WSPNSNVIIAHGRTGGFHLWKTKDKTF-------------------WTQEPVISGHVDGVKDVDWDPSG--EFLLSVSLD  382 (764)
T ss_pred             EcCCCCEEEEecccCcEEEEeccCccc-------------------eeeccccccccccceeeeecCCC--CEEEEeccc
Confidence            999999999999999999998322111                   12344556777777777777777  577777777


Q ss_pred             CeEEEEe----------------------------------------------cCC------------------------
Q psy10867        207 RTCKIFD----------------------------------------------LCT------------------------  216 (343)
Q Consensus       207 ~~i~~wd----------------------------------------------~~~------------------------  216 (343)
                      .+-|+|-                                              ...                        
T Consensus       383 QTTRlFa~wg~q~~wHEiaRPQiHGyDl~c~~~vn~~~~FVSgAdEKVlRvF~aPk~fv~~l~~i~g~~~~~~~~~p~gA  462 (764)
T KOG1063|consen  383 QTTRLFARWGRQQEWHEIARPQIHGYDLTCLSFVNEDLQFVSGADEKVLRVFEAPKSFVKSLMAICGKCFKGSDELPDGA  462 (764)
T ss_pred             cceeeecccccccceeeecccccccccceeeehccCCceeeecccceeeeeecCcHHHHHHHHHHhCccccCchhccccc
Confidence            6666542                                              200                        


Q ss_pred             -------------------Cce----------------------------------EEEeecCCcEEEEEEcCCCCEEEE
Q psy10867        217 -------------------GED----------------------------------LLSLILDTRLTCVAFDGTEDNIYM  243 (343)
Q Consensus       217 -------------------~~~----------------------------------~~~~~~~~~i~~~~~~~~~~~l~~  243 (343)
                                         |..                                  .+.+.|...|.+++.+|+++++++
T Consensus       463 ~VpaLGLSnKa~~~~e~~~G~~~~~~~et~~~~~p~~L~ePP~EdqLq~~tLwPEv~KLYGHGyEv~~l~~s~~gnliAS  542 (764)
T KOG1063|consen  463 NVPALGLSNKAFFPGETNTGGEAAVCAETPLAAAPCELTEPPTEDQLQQNTLWPEVHKLYGHGYEVYALAISPTGNLIAS  542 (764)
T ss_pred             ccccccccCCCCcccccccccccceeeecccccCchhccCCChHHHHHHhccchhhHHhccCceeEEEEEecCCCCEEee
Confidence                               000                                  000123456899999999999999


Q ss_pred             EcCCC-----cEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEeccccee----e
Q psy10867        244 GTSEG-----VIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQC----L  314 (343)
Q Consensus       244 ~~~d~-----~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~----~  314 (343)
                      ++...     .|++|+..+...           ...+.+|.-.|+.++|||||++|++.|.|.++.+|.......    .
T Consensus       543 aCKS~~~ehAvI~lw~t~~W~~-----------~~~L~~HsLTVT~l~FSpdg~~LLsvsRDRt~sl~~~~~~~~~e~~f  611 (764)
T KOG1063|consen  543 ACKSSLKEHAVIRLWNTANWLQ-----------VQELEGHSLTVTRLAFSPDGRYLLSVSRDRTVSLYEVQEDIKDEFRF  611 (764)
T ss_pred             hhhhCCccceEEEEEeccchhh-----------hheecccceEEEEEEECCCCcEEEEeecCceEEeeeeecccchhhhh
Confidence            87643     689999887654           456889999999999999999999999999999998754321    1


Q ss_pred             eecc-cCCceEEEEEccCCCeeeecccCC
Q psy10867        315 RTIQ-HKGPVLGAFLGLLPPAIHDYDFTP  342 (343)
Q Consensus       315 ~~~~-~~~~v~~~~~sp~~~~l~~~~~~~  342 (343)
                      ...+ |..-|+++.|+|++.++++++-.+
T Consensus       612 a~~k~HtRIIWdcsW~pde~~FaTaSRDK  640 (764)
T KOG1063|consen  612 ACLKAHTRIIWDCSWSPDEKYFATASRDK  640 (764)
T ss_pred             ccccccceEEEEcccCcccceeEEecCCc
Confidence            2234 888899999999999999988543

>KOG2096|consensus

Probab=99.95  E-value=8.8e-26  Score=168.85  Aligned_cols=252  Identities=15%  Similarity=0.138  Sum_probs=183.3

Q ss_pred             eecccCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCCceEE--Ee--cccCCCeEEEEEecCCCE-EEEecCCCeEEE
Q psy10867         72 QLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGRLLA--TA--SSHYQPITIVKWSADSNF-IVTGGEDGTICV  145 (343)
Q Consensus        72 ~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~--~~--~~~~~~v~~~~~~~~~~~-l~s~~~dg~i~i  145 (343)
                      ..+.+|.+.|++++|+.||+.||+ +.|+.|++|++++-+...  .+  .-.-+..+.+.|.||-+- +++.-...++++
T Consensus        80 ~~LKgH~~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~dhpT~V~FapDc~s~vv~~~~g~~l~v  159 (420)
T KOG2096|consen   80 SVLKGHKKEVTDVAFSSDGKKLATISGDRSIRLWDVRDFENKEHRCIRQNVEYDHPTRVVFAPDCKSVVVSVKRGNKLCV  159 (420)
T ss_pred             hhhhccCCceeeeEEcCCCceeEEEeCCceEEEEecchhhhhhhhHhhccccCCCceEEEECCCcceEEEEEccCCEEEE
Confidence            346699999999999999999998 789999999998642210  11  111234678999998774 445556668999


Q ss_pred             eecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeec
Q psy10867        146 WQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLIL  225 (343)
Q Consensus       146 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~  225 (343)
                      |.+...+. ...         .-....+......+.|...+..+-...++  .++++++.|..|.+|+++ |+.+..+..
T Consensus       160 yk~~K~~d-G~~---------~~~~v~~D~~~f~~kh~v~~i~iGiA~~~--k~imsas~dt~i~lw~lk-Gq~L~~idt  226 (420)
T KOG2096|consen  160 YKLVKKTD-GSG---------SHHFVHIDNLEFERKHQVDIINIGIAGNA--KYIMSASLDTKICLWDLK-GQLLQSIDT  226 (420)
T ss_pred             EEeeeccc-CCC---------CcccccccccccchhcccceEEEeecCCc--eEEEEecCCCcEEEEecC-Cceeeeecc
Confidence            98765321 000         00011112223344577778788777777  899999999999999998 998888874


Q ss_pred             -CCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEE
Q psy10867        226 -DTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLK  304 (343)
Q Consensus       226 -~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~  304 (343)
                       ...-+..+.+|+|+++++++-.-.|++|..--.+.-   .++.-..+..+.+|...|..++|+++.+.+++.|.||+++
T Consensus       227 nq~~n~~aavSP~GRFia~~gFTpDVkVwE~~f~kdG---~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~wr  303 (420)
T KOG2096|consen  227 NQSSNYDAAVSPDGRFIAVSGFTPDVKVWEPIFTKDG---TFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGKWR  303 (420)
T ss_pred             ccccccceeeCCCCcEEEEecCCCCceEEEEEeccCc---chhhhhhhheeccchhheeeeeeCCCcceeEEEecCCcEE
Confidence             455777899999999999999999999987542211   1122334778999999999999999999999999999999


Q ss_pred             EEeccc-------ceeeeecc-----cCCceEEEEEccCCCeeeecc
Q psy10867        305 IWHTIS-------RQCLRTIQ-----HKGPVLGAFLGLLPPAIHDYD  339 (343)
Q Consensus       305 iwd~~~-------~~~~~~~~-----~~~~v~~~~~sp~~~~l~~~~  339 (343)
                      +||+.-       .+.+.+..     ..+....++.+|+|+.|+.+.
T Consensus       304 iwdtdVrY~~~qDpk~Lk~g~~pl~aag~~p~RL~lsP~g~~lA~s~  350 (420)
T KOG2096|consen  304 IWDTDVRYEAGQDPKILKEGSAPLHAAGSEPVRLELSPSGDSLAVSF  350 (420)
T ss_pred             EeeccceEecCCCchHhhcCCcchhhcCCCceEEEeCCCCcEEEeec
Confidence            999752       22333331     234455899999999998764

>KOG4378|consensus

Probab=99.95  E-value=2.5e-26  Score=181.36  Aligned_cols=251  Identities=15%  Similarity=0.236  Sum_probs=204.2

Q ss_pred             eEEEecCCCCeEEEEecCC--ceE--EEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcce
Q psy10867          6 EVAFSYDGSGAISVWEPKG--GTL--LMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRI   81 (343)
Q Consensus         6 ~~~~s~~~dg~i~iwd~~~--~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v   81 (343)
                      -+..+.++|..+++|.-..  ++.  +....+.   .-.|++......++++|+..++|+|||+....+.+.+..|...|
T Consensus        48 lvvas~~gdk~~~~~~K~g~~~~Vp~~~k~~gd---~~~Cv~~~s~S~y~~sgG~~~~Vkiwdl~~kl~hr~lkdh~stv  124 (673)
T KOG4378|consen   48 LVVASMAGDKVMRIKEKDGKTPEVPRVRKLTGD---NAFCVACASQSLYEISGGQSGCVKIWDLRAKLIHRFLKDHQSTV  124 (673)
T ss_pred             EEEeecCCceeEEEecccCCCCccceeeccccc---hHHHHhhhhcceeeeccCcCceeeehhhHHHHHhhhccCCccee
Confidence            3456777899999997532  222  2223333   33455555555788887777999999999877778888999999


Q ss_pred             EEEEECCCCCEEEEe-cCCeEEEEEccCCceEEEeccc-CCCeEEEEEecCCC-EEEEecCCCeEEEeecCccceeeeee
Q psy10867         82 SSMQASPDAAYIAVS-IETKLHMWQISSGRLLATASSH-YQPITIVKWSADSN-FIVTGGEDGTICVWQLSRLICKQTVA  158 (343)
Q Consensus        82 ~~~~~s~~~~~l~~~-~d~~i~v~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~  158 (343)
                      +++.++-...+||+. ..|.|.|..+.++.....+... ...|.-+.|+|..+ +|.+++.+|.|.+||+.....     
T Consensus       125 t~v~YN~~DeyiAsvs~gGdiiih~~~t~~~tt~f~~~sgqsvRll~ys~skr~lL~~asd~G~VtlwDv~g~sp-----  199 (673)
T KOG4378|consen  125 TYVDYNNTDEYIASVSDGGDIIIHGTKTKQKTTTFTIDSGQSVRLLRYSPSKRFLLSIASDKGAVTLWDVQGMSP-----  199 (673)
T ss_pred             EEEEecCCcceeEEeccCCcEEEEecccCccccceecCCCCeEEEeecccccceeeEeeccCCeEEEEeccCCCc-----
Confidence            999999999999984 5679999999998777777644 34566899999655 667789999999999988654     


Q ss_pred             cCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCCcEEEEEEcCCC
Q psy10867        159 FGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTE  238 (343)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~  238 (343)
                                      .......|..+...++|+|..+ .+|++.+.|..|.+||.+..+....+....+...++|.++|
T Consensus       200 ----------------~~~~~~~HsAP~~gicfspsne-~l~vsVG~Dkki~~yD~~s~~s~~~l~y~~Plstvaf~~~G  262 (673)
T KOG4378|consen  200 ----------------IFHASEAHSAPCRGICFSPSNE-ALLVSVGYDKKINIYDIRSQASTDRLTYSHPLSTVAFSECG  262 (673)
T ss_pred             ----------------ccchhhhccCCcCcceecCCcc-ceEEEecccceEEEeecccccccceeeecCCcceeeecCCc
Confidence                            3344567999999999999886 89999999999999999998888888899999999999999


Q ss_pred             CEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCC
Q psy10867        239 DNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITG  291 (343)
Q Consensus       239 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~  291 (343)
                      .+|++|...|.|..||++..+.+          +..+..|...|++++|-|..
T Consensus       263 ~~L~aG~s~G~~i~YD~R~~k~P----------v~v~sah~~sVt~vafq~s~  305 (673)
T KOG4378|consen  263 TYLCAGNSKGELIAYDMRSTKAP----------VAVRSAHDASVTRVAFQPSP  305 (673)
T ss_pred             eEEEeecCCceEEEEecccCCCC----------ceEeeecccceeEEEeeecc
Confidence            99999999999999999986543          66788899999999998764

>KOG0269|consensus

Probab=99.95  E-value=9.4e-27  Score=192.75  Aligned_cols=231  Identities=20%  Similarity=0.244  Sum_probs=183.5

Q ss_pred             CcceEEEEECCCCCEEEEecCCeEEEEEccCCc----eEEEecccC---CCeEEEEEec-CCCEEEEecCCCeEEEeecC
Q psy10867         78 PGRISSMQASPDAAYIAVSIETKLHMWQISSGR----LLATASSHY---QPITIVKWSA-DSNFIVTGGEDGTICVWQLS  149 (343)
Q Consensus        78 ~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~----~~~~~~~~~---~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~  149 (343)
                      .....++...++-..++......+.||.+....    +...++...   ..+..+.|.. +.++|++++..|.|.+||+.
T Consensus        39 k~~~nAIs~nr~~~qiv~AGrs~lklyai~~~~~~~~~~~~~k~kqn~~~S~~DVkW~~~~~NlIAT~s~nG~i~vWdln  118 (839)
T KOG0269|consen   39 KAKANAISVNRDINQIVVAGRSLLKLYAINPNDFSEKCNHRFKTKQNKFYSAADVKWGQLYSNLIATCSTNGVISVWDLN  118 (839)
T ss_pred             ccccceEeecCCcceeEEecccceeeEeeCcccCCcceeeecccccceeeehhhcccccchhhhheeecCCCcEEEEecC
Confidence            345667777788877777667778888776432    222222211   2345677865 67799999999999999998


Q ss_pred             ccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCc
Q psy10867        150 RLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTR  228 (343)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~  228 (343)
                      ....                   .+.+..+..|...++++.|++..+ .+|++|+.||+|++||++..+...++. ....
T Consensus       119 k~~r-------------------nk~l~~f~EH~Rs~~~ldfh~tep-~iliSGSQDg~vK~~DlR~~~S~~t~~~nSES  178 (839)
T KOG0269|consen  119 KSIR-------------------NKLLTVFNEHERSANKLDFHSTEP-NILISGSQDGTVKCWDLRSKKSKSTFRSNSES  178 (839)
T ss_pred             cccc-------------------chhhhHhhhhccceeeeeeccCCc-cEEEecCCCceEEEEeeecccccccccccchh
Confidence            7311                   125567788999999999999877 899999999999999999988887776 4567


Q ss_pred             EEEEEEcCC-CCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEe
Q psy10867        229 LTCVAFDGT-EDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWH  307 (343)
Q Consensus       229 i~~~~~~~~-~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd  307 (343)
                      |..+.|+|. +.+++++...|.+++||++...+.          ...+.+|.++|.++.|+|++.+||+|+.|++|+|||
T Consensus       179 iRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r~----------~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd  248 (839)
T KOG0269|consen  179 IRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDRC----------EKKLTAHNGPVLCLNWHPNREWLATGGRDKMVKIWD  248 (839)
T ss_pred             hhceeeccCCCceEEEecCCceEEEeeccCchhH----------HHHhhcccCceEEEeecCCCceeeecCCCccEEEEe
Confidence            999999995 578888999999999999976433          556889999999999999999999999999999999


Q ss_pred             cccce--eeeecccCCceEEEEEccCCCeeeec
Q psy10867        308 TISRQ--CLRTIQHKGPVLGAFLGLLPPAIHDY  338 (343)
Q Consensus       308 ~~~~~--~~~~~~~~~~v~~~~~sp~~~~l~~~  338 (343)
                      +.+.+  .+.++....++..+.|-|+.++.++.
T Consensus       249 ~t~~~~~~~~tInTiapv~rVkWRP~~~~hLAt  281 (839)
T KOG0269|consen  249 MTDSRAKPKHTINTIAPVGRVKWRPARSYHLAT  281 (839)
T ss_pred             ccCCCccceeEEeecceeeeeeeccCccchhhh
Confidence            98654  45555578899999999998875543

>KOG1034|consensus

Probab=99.95  E-value=9.9e-26  Score=169.08  Aligned_cols=288  Identities=19%  Similarity=0.222  Sum_probs=207.4

Q ss_pred             EEecCCCCeEEEEecCC-c--eEEEEEec--CCCCcceEEEEeCC----ceEEEEEcCCCeEEEEeCCCcccceecccCC
Q psy10867          8 AFSYDGSGAISVWEPKG-G--TLLMSYKG--ASVLSPHSMCLLGN----DYVLGVEKGKPMIQAWPVNSQEKAQLRLICP   78 (343)
Q Consensus         8 ~~s~~~dg~i~iwd~~~-~--~~~~~~~~--~~~~~v~~~~~~~~----~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~   78 (343)
                      +|+..|...+.+|+... +  ..++.+..  ++. ....++|+-+    ..++|+++.-|.|+|.|+.+++....+.+|.
T Consensus        57 vfatvG~~rvtiy~c~~d~~ir~lq~y~D~d~~E-sfytcsw~yd~~~~~p~la~~G~~GvIrVid~~~~~~~~~~~ghG  135 (385)
T KOG1034|consen   57 VFATVGGNRVTIYECPGDGGIRLLQSYADEDHDE-SFYTCSWSYDSNTGNPFLAAGGYLGVIRVIDVVSGQCSKNYRGHG  135 (385)
T ss_pred             eEEEeCCcEEEEEEECCccceeeeeeccCCCCCc-ceEEEEEEecCCCCCeeEEeecceeEEEEEecchhhhccceeccC
Confidence            34455567888888654 3  34444443  444 6677788732    3566666566999999999999998899999


Q ss_pred             cceEEEEECCCC-CEEEE-ecCCeEEEEEccCCceEEEec---ccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccce
Q psy10867         79 GRISSMQASPDA-AYIAV-SIETKLHMWQISSGRLLATAS---SHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLIC  153 (343)
Q Consensus        79 ~~v~~~~~s~~~-~~l~~-~~d~~i~v~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~  153 (343)
                      ..|+.+.|.|+. +++++ +.|..|++|++++..++..+.   +|.+.|.++.|++++.+|++++.|.++++|++...+.
T Consensus       136 ~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~VfGG~egHrdeVLSvD~~~~gd~i~ScGmDhslk~W~l~~~~f  215 (385)
T KOG1034|consen  136 GSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVFGGVEGHRDEVLSVDFSLDGDRIASCGMDHSLKLWRLNVKEF  215 (385)
T ss_pred             ccchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEEecccccccCcEEEEEEcCCCCeeeccCCcceEEEEecChhHH
Confidence            999999999977 45554 789999999999999988764   7999999999999999999999999999999996654


Q ss_pred             eeeeecCCCCCCCCcccccc------ceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecC-CCce-------
Q psy10867        154 KQTVAFGIPGSSGKGVTGLT------EPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLC-TGED-------  219 (343)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~-~~~~-------  219 (343)
                      ...++...+-.......+..      ........|...|.|+.|--    +++++-+-++.|..|..- -++.       
T Consensus       216 ~~~lE~s~~~~~~~t~~pfpt~~~~fp~fst~diHrnyVDCvrw~g----d~ilSkscenaI~~w~pgkl~e~~~~vkp~  291 (385)
T KOG1034|consen  216 KNKLELSITYSPNKTTRPFPTPKTHFPDFSTTDIHRNYVDCVRWFG----DFILSKSCENAIVCWKPGKLEESIHNVKPP  291 (385)
T ss_pred             hhhhhhhcccCCCCccCcCCccccccccccccccccchHHHHHHHh----hheeecccCceEEEEecchhhhhhhccCCC
Confidence            44433221111111110000      01113456888888888865    579999999999999872 1111       


Q ss_pred             ------EEEeec-CCcEE--EEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccc--cccCcEEEEEEc
Q psy10867        220 ------LLSLIL-DTRLT--CVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFI--GHEKQVTSLSCS  288 (343)
Q Consensus       220 ------~~~~~~-~~~i~--~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~s  288 (343)
                            +.++.. ...++  ..+|+|-++.|+.|...|.|++||++..+....         .++.  .....|...+|+
T Consensus       292 es~~Ti~~~~~~~~c~iWfirf~~d~~~~~la~gnq~g~v~vwdL~~~ep~~~---------ttl~~s~~~~tVRQ~sfS  362 (385)
T KOG1034|consen  292 ESATTILGEFDYPMCDIWFIRFAFDPWQKMLALGNQSGKVYVWDLDNNEPPKC---------TTLTHSKSGSTVRQTSFS  362 (385)
T ss_pred             ccceeeeeEeccCccceEEEEEeecHHHHHHhhccCCCcEEEEECCCCCCccC---------ceEEeccccceeeeeeec
Confidence                  122222 22344  445677789999999999999999998655321         1121  124568899999


Q ss_pred             cCCCEEEEEeCCCcEEEEecc
Q psy10867        289 ITGITLLSSSADETLKIWHTI  309 (343)
Q Consensus       289 ~~~~~l~s~~~dg~i~iwd~~  309 (343)
                      .|+.+|+..+.|++|.-||..
T Consensus       363 ~dgs~lv~vcdd~~Vwrwdrv  383 (385)
T KOG1034|consen  363 RDGSILVLVCDDGTVWRWDRV  383 (385)
T ss_pred             ccCcEEEEEeCCCcEEEEEee
Confidence            999999999999999999853

>KOG0650|consensus

Probab=99.95  E-value=9.4e-26  Score=181.91  Aligned_cols=272  Identities=17%  Similarity=0.169  Sum_probs=209.4

Q ss_pred             ceEEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCc--eEEEEEcCCCeEEEEeCCCc--------------
Q psy10867          5 NEVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGND--YVLGVEKGKPMIQAWPVNSQ--------------   68 (343)
Q Consensus         5 ~~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~~~~~~~~~i~iw~~~~~--------------   68 (343)
                      ...+.|++.||+|+||.+.+|.+++++....  .|.|++|+|.+  .++|++.. ..+.|-+..-|              
T Consensus       412 G~wlasGsdDGtvriWEi~TgRcvr~~~~d~--~I~~vaw~P~~~~~vLAvA~~-~~~~ivnp~~G~~~e~~~t~ell~~  488 (733)
T KOG0650|consen  412 GEWLASGSDDGTVRIWEIATGRCVRTVQFDS--EIRSVAWNPLSDLCVLAVAVG-ECVLIVNPIFGDRLEVGPTKELLAS  488 (733)
T ss_pred             cceeeecCCCCcEEEEEeecceEEEEEeecc--eeEEEEecCCCCceeEEEEec-CceEEeCccccchhhhcchhhhhhc
Confidence            3456777789999999999999999998776  89999999865  56666655 33444432111              


Q ss_pred             -------------------cc----ceecccCCcceEEEEECCCCCEEEEe----cCCeEEEEEccCCceEEEecccCCC
Q psy10867         69 -------------------EK----AQLRLICPGRISSMQASPDAAYIAVS----IETKLHMWQISSGRLLATASSHYQP  121 (343)
Q Consensus        69 -------------------~~----~~~~~~~~~~v~~~~~s~~~~~l~~~----~d~~i~v~~~~~~~~~~~~~~~~~~  121 (343)
                                         +.    +.....|...|..+.|+..|.||++.    ....|.|+++.......-|+...+.
T Consensus       489 ~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYlatV~~~~~~~~VliHQLSK~~sQ~PF~kskG~  568 (733)
T KOG0650|consen  489 APNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLATVMPDSGNKSVLIHQLSKRKSQSPFRKSKGL  568 (733)
T ss_pred             CCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCceEEEeccCCCcceEEEEecccccccCchhhcCCc
Confidence                               00    12333577889999999999999972    3458999999877666666666788


Q ss_pred             eEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEE
Q psy10867        122 ITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVA  201 (343)
Q Consensus       122 v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~  201 (343)
                      |.++.|+|...+|+.++. ..|++||+....                      .+..+......|..++++|.|  ..|+
T Consensus       569 vq~v~FHPs~p~lfVaTq-~~vRiYdL~kqe----------------------lvKkL~tg~kwiS~msihp~G--Dnli  623 (733)
T KOG0650|consen  569 VQRVKFHPSKPYLFVATQ-RSVRIYDLSKQE----------------------LVKKLLTGSKWISSMSIHPNG--DNLI  623 (733)
T ss_pred             eeEEEecCCCceEEEEec-cceEEEehhHHH----------------------HHHHHhcCCeeeeeeeecCCC--CeEE
Confidence            999999999999988887 689999998754                      333444566789999999999  6899


Q ss_pred             EeeCCCeEEEEecCCC-ceEEEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCcccccc
Q psy10867        202 SVSHDRTCKIFDLCTG-EDLLSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHE  279 (343)
Q Consensus       202 ~~~~d~~i~~wd~~~~-~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~  279 (343)
                      .++.|+.+..+|+.-. ++.+++. |...+++++|++.-.++++|+.||.+.+|--.-.......  +.--++..+++|.
T Consensus       624 ~gs~d~k~~WfDldlsskPyk~lr~H~~avr~Va~H~ryPLfas~sdDgtv~Vfhg~VY~Dl~qn--pliVPlK~L~gH~  701 (733)
T KOG0650|consen  624 LGSYDKKMCWFDLDLSSKPYKTLRLHEKAVRSVAFHKRYPLFASGSDDGTVIVFHGMVYNDLLQN--PLIVPLKRLRGHE  701 (733)
T ss_pred             EecCCCeeEEEEcccCcchhHHhhhhhhhhhhhhhccccceeeeecCCCcEEEEeeeeehhhhcC--CceEeeeeccCce
Confidence            9999999999999754 4555555 6788999999999999999999999999854322111000  0112366788887


Q ss_pred             Cc----EEEEEEccCCCEEEEEeCCCcEEEE
Q psy10867        280 KQ----VTSLSCSITGITLLSSSADETLKIW  306 (343)
Q Consensus       280 ~~----v~~~~~s~~~~~l~s~~~dg~i~iw  306 (343)
                      ..    |..+.|+|...+|++++.||+|++|
T Consensus       702 ~~~~~gVLd~~wHP~qpWLfsAGAd~tirlf  732 (733)
T KOG0650|consen  702 KTNDLGVLDTIWHPRQPWLFSAGADGTIRLF  732 (733)
T ss_pred             eecccceEeecccCCCceEEecCCCceEEee
Confidence            66    8889999999999999999999998

>KOG2445|consensus

Probab=99.95  E-value=1.2e-24  Score=162.00  Aligned_cols=246  Identities=15%  Similarity=0.165  Sum_probs=190.4

Q ss_pred             cccCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCC----ceEEEecccCCCeEEEEEec--CCCEEEEecCCCeEEEe
Q psy10867         74 RLICPGRISSMQASPDAAYIAV-SIETKLHMWQISSG----RLLATASSHYQPITIVKWSA--DSNFIVTGGEDGTICVW  146 (343)
Q Consensus        74 ~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~----~~~~~~~~~~~~v~~~~~~~--~~~~l~s~~~dg~i~iw  146 (343)
                      ..+|.+-|+++.|.+-|+.+|+ +.|++|+|||.++.    .+....+.|.+.|..+.|.+  -|+.+++++.|+++.||
T Consensus         9 ~s~h~DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iW   88 (361)
T KOG2445|consen    9 DSGHKDLIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIW   88 (361)
T ss_pred             ccCCcceeeeeeecccCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceeee
Confidence            3478889999999999999997 68999999997544    45566788999999999965  68899999999999999


Q ss_pred             ecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEe---
Q psy10867        147 QLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSL---  223 (343)
Q Consensus       147 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~---  223 (343)
                      .-.......             ....+.....+......|+.+.|.|..-+-.+++++.||.+|||+....-.+...   
T Consensus        89 EE~~~~~~~-------------~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq  155 (361)
T KOG2445|consen   89 EEQEKSEEA-------------HGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQ  155 (361)
T ss_pred             eeccccccc-------------ccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhh
Confidence            864221111             0112346677778889999999999865578999999999999987654433322   


Q ss_pred             ---e--------cCCcEEEEEEcCC---CCEEEEEcCC-----CcEEEEEeecccccccccccCCCCCCccccccCcEEE
Q psy10867        224 ---I--------LDTRLTCVAFDGT---EDNIYMGTSE-----GVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTS  284 (343)
Q Consensus       224 ---~--------~~~~i~~~~~~~~---~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  284 (343)
                         .        +..+..|+.|+|.   ..+|++|+.+     +.++||......+..       ..+.++.+|..+|+.
T Consensus       156 ~Ei~~~~~pp~~~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw-------~kva~L~d~~dpI~d  228 (361)
T KOG2445|consen  156 HEIQNVIDPPGKNKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKW-------LKVAELPDHTDPIRD  228 (361)
T ss_pred             hhhhhccCCcccccCcceEEeeccccccCceEEEEcccCCccccceEEEEecCCccee-------eeehhcCCCCCccee
Confidence               2        3445778999984   4678888766     589999877654322       226677899999999


Q ss_pred             EEEccCC----CEEEEEeCCCcEEEEecccc--------------------eeeeecc-cCCceEEEEEccCCCeeeecc
Q psy10867        285 LSCSITG----ITLLSSSADETLKIWHTISR--------------------QCLRTIQ-HKGPVLGAFLGLLPPAIHDYD  339 (343)
Q Consensus       285 ~~~s~~~----~~l~s~~~dg~i~iwd~~~~--------------------~~~~~~~-~~~~v~~~~~sp~~~~l~~~~  339 (343)
                      ++|.|+-    ..||+++.|| |+||++...                    +.+..+. |.++|+.+.|+-.|..|.+.+
T Consensus       229 i~wAPn~Gr~y~~lAvA~kDg-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wNmtGtiLsStG  307 (361)
T KOG2445|consen  229 ISWAPNIGRSYHLLAVATKDG-VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWNMTGTILSSTG  307 (361)
T ss_pred             eeeccccCCceeeEEEeecCc-EEEEEEeeccchhhhhcccCCCCccccceEEeeeccCCCCceEEEEEeeeeeEEeecC
Confidence            9999962    4799999999 999998731                    2344455 899999999999999998876


Q ss_pred             c
Q psy10867        340 F  340 (343)
Q Consensus       340 ~  340 (343)
                      -
T Consensus       308 d  308 (361)
T KOG2445|consen  308 D  308 (361)
T ss_pred             C
Confidence            4

>KOG0650|consensus

Probab=99.95  E-value=2.2e-25  Score=179.85  Aligned_cols=278  Identities=17%  Similarity=0.214  Sum_probs=215.1

Q ss_pred             EEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCC--EEEEecCCeEEEE
Q psy10867         27 LLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAA--YIAVSIETKLHMW  104 (343)
Q Consensus        27 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~--~l~~~~d~~i~v~  104 (343)
                      +-..+.+|.+ .|+++...|.|.++++|++||+++||.+.++.+++.. ...+.|.+++|+|.+.  +||++.+..+.|.
T Consensus       392 ~~lvyrGHtg-~Vr~iSvdp~G~wlasGsdDGtvriWEi~TgRcvr~~-~~d~~I~~vaw~P~~~~~vLAvA~~~~~~iv  469 (733)
T KOG0650|consen  392 CALVYRGHTG-LVRSISVDPSGEWLASGSDDGTVRIWEIATGRCVRTV-QFDSEIRSVAWNPLSDLCVLAVAVGECVLIV  469 (733)
T ss_pred             eeeeEeccCC-eEEEEEecCCcceeeecCCCCcEEEEEeecceEEEEE-eecceeEEEEecCCCCceeEEEEecCceEEe
Confidence            3456889999 9999999999999999999999999999999999765 4466899999999764  5555555445554


Q ss_pred             EccCCc-------------------------------------eEEEecccCCCeEEEEEecCCCEEEEecC---CCeEE
Q psy10867        105 QISSGR-------------------------------------LLATASSHYQPITIVKWSADSNFIVTGGE---DGTIC  144 (343)
Q Consensus       105 ~~~~~~-------------------------------------~~~~~~~~~~~v~~~~~~~~~~~l~s~~~---dg~i~  144 (343)
                      +..-|.                                     -+...-.|...|..+.|+..|.+|++...   ...|.
T Consensus       470 np~~G~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYlatV~~~~~~~~Vl  549 (733)
T KOG0650|consen  470 NPIFGDRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLATVMPDSGNKSVL  549 (733)
T ss_pred             CccccchhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCceEEEeccCCCcceEE
Confidence            432110                                     01222347788999999999999999765   35688


Q ss_pred             EeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee
Q psy10867        145 VWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI  224 (343)
Q Consensus       145 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~  224 (343)
                      |.++......                      ..+....+.|.++.|+|..  .+|+.++. ..|++||+...+.++++.
T Consensus       550 iHQLSK~~sQ----------------------~PF~kskG~vq~v~FHPs~--p~lfVaTq-~~vRiYdL~kqelvKkL~  604 (733)
T KOG0650|consen  550 IHQLSKRKSQ----------------------SPFRKSKGLVQRVKFHPSK--PYLFVATQ-RSVRIYDLSKQELVKKLL  604 (733)
T ss_pred             EEeccccccc----------------------CchhhcCCceeEEEecCCC--ceEEEEec-cceEEEehhHHHHHHHHh
Confidence            9998775322                      2233456779999999998  56666554 679999999887777666


Q ss_pred             c-CCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcE
Q psy10867        225 L-DTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETL  303 (343)
Q Consensus       225 ~-~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i  303 (343)
                      . ...|..++.+|.|..|++|+.|+.+..||+.-...          +...+.-|...+++++|++.-.++++|+.||++
T Consensus       605 tg~kwiS~msihp~GDnli~gs~d~k~~WfDldlssk----------Pyk~lr~H~~avr~Va~H~ryPLfas~sdDgtv  674 (733)
T KOG0650|consen  605 TGSKWISSMSIHPNGDNLILGSYDKKMCWFDLDLSSK----------PYKTLRLHEKAVRSVAFHKRYPLFASGSDDGTV  674 (733)
T ss_pred             cCCeeeeeeeecCCCCeEEEecCCCeeEEEEcccCcc----------hhHHhhhhhhhhhhhhhccccceeeeecCCCcE
Confidence            4 45689999999999999999999999999986433          355688899999999999999999999999999


Q ss_pred             EEEecc------cc---eeeeecc-cC----CceEEEEEccCCCeeeecccC
Q psy10867        304 KIWHTI------SR---QCLRTIQ-HK----GPVLGAFLGLLPPAIHDYDFT  341 (343)
Q Consensus       304 ~iwd~~------~~---~~~~~~~-~~----~~v~~~~~sp~~~~l~~~~~~  341 (343)
                      .|+.-.      ..   -++..++ |.    ..|.++.|+|...+|++++-.
T Consensus       675 ~Vfhg~VY~Dl~qnpliVPlK~L~gH~~~~~~gVLd~~wHP~qpWLfsAGAd  726 (733)
T KOG0650|consen  675 IVFHGMVYNDLLQNPLIVPLKRLRGHEKTNDLGVLDTIWHPRQPWLFSAGAD  726 (733)
T ss_pred             EEEeeeeehhhhcCCceEeeeeccCceeecccceEeecccCCCceEEecCCC
Confidence            998522      11   1234444 43    348889999999999998753

>KOG0302|consensus

Probab=99.95  E-value=1e-25  Score=171.99  Aligned_cols=224  Identities=18%  Similarity=0.343  Sum_probs=173.0

Q ss_pred             eEEEecCCCCeEEEEecCC----------------ceEEEEEecCCCCcceEEEEeC--CceEEEEEcCCCeEEEEeCCC
Q psy10867          6 EVAFSYDGSGAISVWEPKG----------------GTLLMSYKGASVLSPHSMCLLG--NDYVLGVEKGKPMIQAWPVNS   67 (343)
Q Consensus         6 ~~~~s~~~dg~i~iwd~~~----------------~~~~~~~~~~~~~~v~~~~~~~--~~~~~~~~~~~~~i~iw~~~~   67 (343)
                      .++.+-+..|.|+||++..                .+++.++.+|.. .=..++|||  .|.++. |...+.|++|...+
T Consensus       166 ~~~aswse~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~ghk~-EGy~LdWSp~~~g~Lls-GDc~~~I~lw~~~~  243 (440)
T KOG0302|consen  166 VLCASWSENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFNGHKG-EGYGLDWSPIKTGRLLS-GDCVKGIHLWEPST  243 (440)
T ss_pred             ceeeeecccCcEEEEEchhhhhhhcCccccccccccCceEEecccCc-cceeeeccccccccccc-CccccceEeeeecc
Confidence            3556667789999999853                346788899988 889999999  345544 44448999999888


Q ss_pred             cccc---eecccCCcceEEEEECCCC-CEEEE-ecCCeEEEEEccCC---ceEEEecccCCCeEEEEEecCCCEEEEecC
Q psy10867         68 QEKA---QLRLICPGRISSMQASPDA-AYIAV-SIETKLHMWQISSG---RLLATASSHYQPITIVKWSADSNFIVTGGE  139 (343)
Q Consensus        68 ~~~~---~~~~~~~~~v~~~~~s~~~-~~l~~-~~d~~i~v~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~  139 (343)
                      +...   .-+.+|...|..+.|||.. ..+++ +.|+.|+|||++.+   ..+. .+.|.+.|+-|.|+.+-.+|++|+.
T Consensus       244 g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~~-~kAh~sDVNVISWnr~~~lLasG~D  322 (440)
T KOG0302|consen  244 GSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAVS-TKAHNSDVNVISWNRREPLLASGGD  322 (440)
T ss_pred             CceeecCccccccccchhhhccCCccCceEEeeecCceEEEEEecCCCccceeE-eeccCCceeeEEccCCcceeeecCC
Confidence            7654   3455899999999999965 45555 78999999999988   3333 3789999999999988889999999


Q ss_pred             CCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCc-
Q psy10867        140 DGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGE-  218 (343)
Q Consensus       140 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~-  218 (343)
                      ||+++|||++..+..                   .++..++.|..+|+++.|+|... ..+++++.|.+|.+||+.... 
T Consensus       323 dGt~~iwDLR~~~~~-------------------~pVA~fk~Hk~pItsieW~p~e~-s~iaasg~D~QitiWDlsvE~D  382 (440)
T KOG0302|consen  323 DGTLSIWDLRQFKSG-------------------QPVATFKYHKAPITSIEWHPHED-SVIAASGEDNQITIWDLSVEAD  382 (440)
T ss_pred             CceEEEEEhhhccCC-------------------CcceeEEeccCCeeEEEeccccC-ceEEeccCCCcEEEEEeeccCC
Confidence            999999999986543                   37888999999999999999876 789999999999999985321 


Q ss_pred             ------------------eEEEeecCCcEEEEEEcCCCC-EEEEEcCCCcEEEE
Q psy10867        219 ------------------DLLSLILDTRLTCVAFDGTED-NIYMGTSEGVIKSF  253 (343)
Q Consensus       219 ------------------~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~i~  253 (343)
                                        .+........+..+.|+++-. ++++.+.|| +.||
T Consensus       383 ~ee~~~~a~~~L~dlPpQLLFVHqGQke~KevhWH~QiPG~lvsTa~dG-fnVf  435 (440)
T KOG0302|consen  383 EEEIDQEAAEGLQDLPPQLLFVHQGQKEVKEVHWHRQIPGLLVSTAIDG-FNVF  435 (440)
T ss_pred             hhhhccccccchhcCCceeEEEecchhHhhhheeccCCCCeEEEecccc-eeEE
Confidence                              111112345588889998754 555555566 4444

>KOG0307|consensus

Probab=99.95  E-value=8e-27  Score=201.10  Aligned_cols=271  Identities=17%  Similarity=0.245  Sum_probs=205.3

Q ss_pred             eEEEEeCCce-EEEEEc----------CCCeEEEEeCCCcccc-----eecccCCcceEEEEECCCCCE----EEE-ecC
Q psy10867         40 HSMCLLGNDY-VLGVEK----------GKPMIQAWPVNSQEKA-----QLRLICPGRISSMQASPDAAY----IAV-SIE   98 (343)
Q Consensus        40 ~~~~~~~~~~-~~~~~~----------~~~~i~iw~~~~~~~~-----~~~~~~~~~v~~~~~s~~~~~----l~~-~~d   98 (343)
                      ..++|+|++. ++++|.          .+.++.||.+......     .--.....+.+.++|.+.+..    ||+ ..|
T Consensus        10 a~~awSp~~~~~laagt~aq~~D~sfst~~slEifeld~~~~~~dlk~~~s~~s~~rF~kL~W~~~g~~~~GlIaGG~ed   89 (1049)
T KOG0307|consen   10 ATFAWSPASPPLLAAGTAAQQFDASFSTSASLEIFELDFSDESSDLKPVGSLQSSNRFNKLAWGSYGSHSHGLIAGGLED   89 (1049)
T ss_pred             ceEEecCCCchhhHHHhhhhccccccccccccceeeecccCccccccccccccccccceeeeecccCCCccceeeccccC
Confidence            4567888774 444432          2345666654322111     111134567899999987654    776 589


Q ss_pred             CeEEEEEccC---C---ceEEEecccCCCeEEEEEecC-CCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCcccc
Q psy10867         99 TKLHMWQISS---G---RLLATASSHYQPITIVKWSAD-SNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTG  171 (343)
Q Consensus        99 ~~i~v~~~~~---~---~~~~~~~~~~~~v~~~~~~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  171 (343)
                      |.|.+||...   +   ..+.++..|.+.|..+.|++. +++|++|+.||.|.|||+...+...+..             
T Consensus        90 G~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~geI~iWDlnn~~tP~~~~-------------  156 (1049)
T KOG0307|consen   90 GNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADDGEILIWDLNKPETPFTPG-------------  156 (1049)
T ss_pred             CceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCceeeccCCCCcEEEeccCCcCCCCCCC-------------
Confidence            9999999865   2   335567789999999999995 4599999999999999998854322110             


Q ss_pred             ccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCC---cEEEEEEcCCCC-EEEEEcCC
Q psy10867        172 LTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDT---RLTCVAFDGTED-NIYMGTSE  247 (343)
Q Consensus       172 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~---~i~~~~~~~~~~-~l~~~~~d  247 (343)
                             .......|.+++|+..-. ++|++++.+|.+.|||++..+.+..+....   .+..++|+|+.. .|++++.|
T Consensus       157 -------~~~~~~eI~~lsWNrkvq-hILAS~s~sg~~~iWDlr~~~pii~ls~~~~~~~~S~l~WhP~~aTql~~As~d  228 (1049)
T KOG0307|consen  157 -------SQAPPSEIKCLSWNRKVS-HILASGSPSGRAVIWDLRKKKPIIKLSDTPGRMHCSVLAWHPDHATQLLVASGD  228 (1049)
T ss_pred             -------CCCCcccceEeccchhhh-HHhhccCCCCCceeccccCCCcccccccCCCccceeeeeeCCCCceeeeeecCC
Confidence                   122557899999998765 789999999999999999998887776433   388999999874 56666654


Q ss_pred             C---cEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCC-CEEEEEeCCCcEEEEecccceeeeecc-cCCc
Q psy10867        248 G---VIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITG-ITLLSSSADETLKIWHTISRQCLRTIQ-HKGP  322 (343)
Q Consensus       248 ~---~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~  322 (343)
                      .   .|.+||++.....          +..+.+|...|.++.|++.+ ++|++++.|+.|.+|+.++++.+..+. ..+.
T Consensus       229 d~~PviqlWDlR~assP----------~k~~~~H~~GilslsWc~~D~~lllSsgkD~~ii~wN~~tgEvl~~~p~~~nW  298 (1049)
T KOG0307|consen  229 DSAPVIQLWDLRFASSP----------LKILEGHQRGILSLSWCPQDPRLLLSSGKDNRIICWNPNTGEVLGELPAQGNW  298 (1049)
T ss_pred             CCCceeEeecccccCCc----------hhhhcccccceeeeccCCCCchhhhcccCCCCeeEecCCCceEeeecCCCCcc
Confidence            4   6999999975433          56688999999999999966 899999999999999999999999998 7889


Q ss_pred             eEEEEEccCCC-eeeecccC
Q psy10867        323 VLGAFLGLLPP-AIHDYDFT  341 (343)
Q Consensus       323 v~~~~~sp~~~-~l~~~~~~  341 (343)
                      +..+.|.|... .+++++|.
T Consensus       299 ~fdv~w~pr~P~~~A~asfd  318 (1049)
T KOG0307|consen  299 CFDVQWCPRNPSVMAAASFD  318 (1049)
T ss_pred             eeeeeecCCCcchhhhheec
Confidence            99999999888 45555554

>KOG1538|consensus

Probab=99.94  E-value=1.3e-25  Score=183.74  Aligned_cols=269  Identities=15%  Similarity=0.246  Sum_probs=215.7

Q ss_pred             ccceEEEecCC-------CCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecc
Q psy10867          3 LLNEVAFSYDG-------SGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRL   75 (343)
Q Consensus         3 ~v~~~~~s~~~-------dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~   75 (343)
                      .|+.++|-|||       +..+.+||+..|..++++++|++ .|.|++|+.||+.+|+|+.|..+.+|+..-...+  ..
T Consensus        14 ci~d~afkPDGsqL~lAAg~rlliyD~ndG~llqtLKgHKD-tVycVAys~dGkrFASG~aDK~VI~W~~klEG~L--kY   90 (1081)
T KOG1538|consen   14 CINDIAFKPDGTQLILAAGSRLLVYDTSDGTLLQPLKGHKD-TVYCVAYAKDGKRFASGSADKSVIIWTSKLEGIL--KY   90 (1081)
T ss_pred             chheeEECCCCceEEEecCCEEEEEeCCCcccccccccccc-eEEEEEEccCCceeccCCCceeEEEeccccccee--ee
Confidence            47789999998       57889999999999999999999 9999999999999999999999999986543322  33


Q ss_pred             cCCcceEEEEECCCCCEEEEecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceee
Q psy10867         76 ICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQ  155 (343)
Q Consensus        76 ~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~  155 (343)
                      .|.+.|.|+.|+|-.+.|+++.=...-+|..+.... ...+ ....+.+++|..||++++.|-.||+|.+-+-...... 
T Consensus        91 SH~D~IQCMsFNP~~h~LasCsLsdFglWS~~qK~V-~K~k-ss~R~~~CsWtnDGqylalG~~nGTIsiRNk~gEek~-  167 (1081)
T KOG1538|consen   91 SHNDAIQCMSFNPITHQLASCSLSDFGLWSPEQKSV-SKHK-SSSRIICCSWTNDGQYLALGMFNGTISIRNKNGEEKV-  167 (1081)
T ss_pred             ccCCeeeEeecCchHHHhhhcchhhccccChhhhhH-Hhhh-hheeEEEeeecCCCcEEEEeccCceEEeecCCCCcce-
Confidence            799999999999999999998777788998764432 2222 2456889999999999999999999998865433211 


Q ss_pred             eeecCCCCCCCCccccccceeeeecccccceEEEEeecCC---CceEEEEeeCCCeEEEEecCCCceEE-EeecCCcEEE
Q psy10867        156 TVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLG---AKSRVASVSHDRTCKIFDLCTGEDLL-SLILDTRLTC  231 (343)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~~~l~~~~~d~~i~~wd~~~~~~~~-~~~~~~~i~~  231 (343)
                                         .+....+...+|.+++|+|..   ....++......++.+|.+. |+.+. .-..+-...|
T Consensus       168 -------------------~I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~DW~qTLSFy~Ls-G~~Igk~r~L~FdP~C  227 (1081)
T KOG1538|consen  168 -------------------KIERPGGSNSPIWSICWNPSSGEGRNDILAVADWGQTLSFYQLS-GKQIGKDRALNFDPCC  227 (1081)
T ss_pred             -------------------EEeCCCCCCCCceEEEecCCCCCCccceEEEEeccceeEEEEec-ceeecccccCCCCchh
Confidence                               233344678899999999873   23578888888889888874 44443 3335667889


Q ss_pred             EEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecc
Q psy10867        232 VAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTI  309 (343)
Q Consensus       232 ~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~  309 (343)
                      +.+.++|.+++.|+.|+.+++|--..-.            +.+......+|+.++..|++++++.|+.||+|.-|++.
T Consensus       228 isYf~NGEy~LiGGsdk~L~~fTR~Gvr------------LGTvg~~D~WIWtV~~~PNsQ~v~~GCqDGTiACyNl~  293 (1081)
T KOG1538|consen  228 ISYFTNGEYILLGGSDKQLSLFTRDGVR------------LGTVGEQDSWIWTVQAKPNSQYVVVGCQDGTIACYNLI  293 (1081)
T ss_pred             heeccCCcEEEEccCCCceEEEeecCeE------------EeeccccceeEEEEEEccCCceEEEEEccCeeehhhhH
Confidence            9999999999999999999999654321            33444467899999999999999999999999999874

>KOG1445|consensus

Probab=99.94  E-value=1.7e-25  Score=182.09  Aligned_cols=144  Identities=15%  Similarity=0.214  Sum_probs=113.4

Q ss_pred             EEEecCCCC-eEEEEecCC-c---eEEEEEecCCCCcceEEEEeC-CceEEEEEcCCCeEEEEeCCCcccce------ec
Q psy10867          7 VAFSYDGSG-AISVWEPKG-G---TLLMSYKGASVLSPHSMCLLG-NDYVLGVEKGKPMIQAWPVNSQEKAQ------LR   74 (343)
Q Consensus         7 ~~~s~~~dg-~i~iwd~~~-~---~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~i~iw~~~~~~~~~------~~   74 (343)
                      ++|...+.| .+-|--+.. |   +.+..+.+|.+ .|+.+.|+| +..++|+++.|..++||.+..+....      .+
T Consensus        46 lAFn~e~~G~~lgvlPl~~~Gr~~r~i~~l~~H~d-~VtDl~FspF~D~LLAT~S~D~~VKiW~lp~g~~q~LSape~~~  124 (1012)
T KOG1445|consen   46 LAFNIEGEGGKLGVLPLTAKGRRTRDIGILAAHGD-QVTDLGFSPFADELLATCSRDEPVKIWKLPRGHSQKLSAPEIDV  124 (1012)
T ss_pred             EEEeecCCCceEEEEeccccCccccccceeecccc-eeeccCccccchhhhhcccCCCeeEEEecCCCcccccCCcceee
Confidence            445555544 555554432 2   23455788999 999999999 46788999999999999998443221      12


Q ss_pred             ccCCcceEEEEECCCC-CEEEEecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCcc
Q psy10867         75 LICPGRISSMQASPDA-AYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRL  151 (343)
Q Consensus        75 ~~~~~~v~~~~~s~~~-~~l~~~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~  151 (343)
                      .+..-.|.++.|+|.. .+|+++..|.++|||+.+++.+..+.+|...|.+..|+.||.++++++.|.+|+|||.+..
T Consensus       125 g~~~~~vE~l~fHpTaDgil~s~a~g~v~i~D~stqk~~~el~~h~d~vQSa~WseDG~llatscKdkqirifDPRa~  202 (1012)
T KOG1445|consen  125 GGGNVIVECLRFHPTADGILASGAHGSVYITDISTQKTAVELSGHTDKVQSADWSEDGKLLATSCKDKQIRIFDPRAS  202 (1012)
T ss_pred             cCCceEEEEeecccCcCceEEeccCceEEEEEcccCceeecccCCchhhhccccccCCceEeeecCCcceEEeCCccC
Confidence            2334468899999954 5777888999999999999999999999999999999999999999999999999999864

>KOG1009|consensus

Probab=99.94  E-value=9.5e-25  Score=168.18  Aligned_cols=268  Identities=18%  Similarity=0.209  Sum_probs=201.1

Q ss_pred             cceEEEEeCCce-EEEEEcCCCeEEEEeCCCcccc---------eecccCCcceEEEEECCCCCEEEEe-cCCeEEEEEc
Q psy10867         38 SPHSMCLLGNDY-VLGVEKGKPMIQAWPVNSQEKA---------QLRLICPGRISSMQASPDAAYIAVS-IETKLHMWQI  106 (343)
Q Consensus        38 ~v~~~~~~~~~~-~~~~~~~~~~i~iw~~~~~~~~---------~~~~~~~~~v~~~~~s~~~~~l~~~-~d~~i~v~~~  106 (343)
                      ++.++.|.++.. .+++|+.|..|+||.++.++.-         ..+..|...|+++.|+|+|.+||++ .+|.|.+|-.
T Consensus        15 pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~lWk~   94 (434)
T KOG1009|consen   15 PVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGGDGGEVFLWKQ   94 (434)
T ss_pred             ceEEEEeccCcccceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeeeecCCCceEEEEEe
Confidence            899999998765 8888888899999987644322         3456899999999999999999985 6689999986


Q ss_pred             c--------C--------CceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccc
Q psy10867        107 S--------S--------GRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVT  170 (343)
Q Consensus       107 ~--------~--------~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  170 (343)
                      .        +        -.....+.+|...|..++|+|++.++++++.|..+++||+..+.                  
T Consensus        95 ~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~~G~------------------  156 (434)
T KOG1009|consen   95 GDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVHAGQ------------------  156 (434)
T ss_pred             cCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCceeeeeeccceEEEEEeccce------------------
Confidence            5        2        12245667899999999999999999999999999999999975                  


Q ss_pred             cccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee--------------------cC----
Q psy10867        171 GLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI--------------------LD----  226 (343)
Q Consensus       171 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~--------------------~~----  226 (343)
                          ....+..|...+..++|.|-+  +++++-+.|...+.+.+...+......                    |+    
T Consensus       157 ----l~~~~~dh~~yvqgvawDpl~--qyv~s~s~dr~~~~~~~~~~~~~~~~~~~~m~~~~~~~~e~~s~rLfhDeTlk  230 (434)
T KOG1009|consen  157 ----LLAILDDHEHYVQGVAWDPLN--QYVASKSSDRHPEGFSAKLKQVIKRHGLDIMPAKAFNEREGKSTRLFHDETLK  230 (434)
T ss_pred             ----eEeeccccccccceeecchhh--hhhhhhccCcccceeeeeeeeeeeeeeeeEeeecccCCCCcceeeeeecCchh
Confidence                556667899999999999998  899999999877777765433322211                    11    


Q ss_pred             CcEEEEEEcCCCCEEEEEcC----CCc-----EEEEEeecccccccccccCCCCCCccccccCcEEEEEEcc--------
Q psy10867        227 TRLTCVAFDGTEDNIYMGTS----EGV-----IKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSI--------  289 (343)
Q Consensus       227 ~~i~~~~~~~~~~~l~~~~~----d~~-----i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~--------  289 (343)
                      .-...++|+|+|.+|++...    .+.     .++|+-...          ..+...+.....+...+.|+|        
T Consensus       231 sFFrRlsfTPdG~llvtPag~~~~g~~~~~n~tYvfsrk~l----------~rP~~~lp~~~k~~lavr~~pVy~elrp~  300 (434)
T KOG1009|consen  231 SFFRRLSFTPDGSLLVTPAGLFKVGGGVFRNTSYVFSRKDL----------KRPAARLPSPKKPALAVRFSPVYYELRPL  300 (434)
T ss_pred             hhhhhcccCCCCcEEEcccceeeeCCceeeceeEeeccccc----------cCceeecCCCCcceEEEEeeeeEEEeccc
Confidence            12456889999999988532    222     233432221          122344444455555555544        


Q ss_pred             ----------CCCEEEEEeCCCcEEEEecccceeeeecc--cCCceEEEEEccCCCeeeeccc
Q psy10867        290 ----------TGITLLSSSADETLKIWHTISRQCLRTIQ--HKGPVLGAFLGLLPPAIHDYDF  340 (343)
Q Consensus       290 ----------~~~~l~s~~~dg~i~iwd~~~~~~~~~~~--~~~~v~~~~~sp~~~~l~~~~~  340 (343)
                                -+-.+|.++.+ .|++||.++-+++....  |-..+++++|++||..|+.++.
T Consensus       301 ~~~~~~~~lpyrlvfaiAt~~-svyvydtq~~~P~~~v~nihy~~iTDiaws~dg~~l~vSS~  362 (434)
T KOG1009|consen  301 SSEKFLFVLPYRLVFAIATKN-SVYVYDTQTLEPLAVVDNIHYSAITDIAWSDDGSVLLVSST  362 (434)
T ss_pred             cccccccccccceEEEEeecc-eEEEeccccccceEEEeeeeeeeecceeecCCCcEEEEecc
Confidence                      22345566655 89999999999988887  9999999999999999998764

>KOG2919|consensus

Probab=99.94  E-value=2.9e-24  Score=161.05  Aligned_cols=264  Identities=15%  Similarity=0.183  Sum_probs=196.4

Q ss_pred             ccceEEEecCCCCeEEEEecCCc------------eEEEEEecCCCCcceEEEEe-------CCceEEEEEcCCCeEEEE
Q psy10867          3 LLNEVAFSYDGSGAISVWEPKGG------------TLLMSYKGASVLSPHSMCLL-------GNDYVLGVEKGKPMIQAW   63 (343)
Q Consensus         3 ~v~~~~~s~~~dg~i~iwd~~~~------------~~~~~~~~~~~~~v~~~~~~-------~~~~~~~~~~~~~~i~iw   63 (343)
                      |-.+.+++++.|..+++|++...            +...+++-..+..|...+|-       |+-.++++++.+.-|++|
T Consensus        59 PDGSciL~~sedn~l~~~nlP~dlys~~~~~~~~~~~~~~~r~~eg~tvydy~wYs~M~s~qP~t~l~a~ssr~~PIh~w  138 (406)
T KOG2919|consen   59 PDGSCILSLSEDNCLNCWNLPFDLYSKKADGPLNFSKHLSYRYQEGETVYDYCWYSRMKSDQPSTNLFAVSSRDQPIHLW  138 (406)
T ss_pred             CCCceEEeecccCeeeEEecChhhcccCCCCccccccceeEEeccCCEEEEEEeeeccccCCCccceeeeccccCceeee
Confidence            44566677777899999998531            11122222222267777775       567888888888999999


Q ss_pred             eCCCcccceecc--cCCc---ceEEEEECCCCCEEEEecCCeEEEEEc-cCCceEEE--e-----cccCCCeEEEEEec-
Q psy10867         64 PVNSQEKAQLRL--ICPG---RISSMQASPDAAYIAVSIETKLHMWQI-SSGRLLAT--A-----SSHYQPITIVKWSA-  129 (343)
Q Consensus        64 ~~~~~~~~~~~~--~~~~---~v~~~~~s~~~~~l~~~~d~~i~v~~~-~~~~~~~~--~-----~~~~~~v~~~~~~~-  129 (343)
                      |.-+++....+.  .|.+   ...+++|+|||..|.+|....|+++|+ +.|+....  .     .+..+-+.+++|+| 
T Consensus       139 daftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlfaGykrcirvFdt~RpGr~c~vy~t~~~~k~gq~giisc~a~sP~  218 (406)
T KOG2919|consen  139 DAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLFAGYKRCIRVFDTSRPGRDCPVYTTVTKGKFGQKGIISCFAFSPM  218 (406)
T ss_pred             eccccccccchhhhhhHHhhhhheeEEecCCCCeEeecccceEEEeeccCCCCCCcchhhhhcccccccceeeeeeccCC
Confidence            999998764443  3444   356899999999999999999999998 55543221  1     13367789999999 


Q ss_pred             CCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeC-CCe
Q psy10867        130 DSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSH-DRT  208 (343)
Q Consensus       130 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~-d~~  208 (343)
                      +...++.|+....+-|+.-...                      .++..+.+|.+.|+.++|.++|  +.|++|+. |..
T Consensus       219 ~~~~~a~gsY~q~~giy~~~~~----------------------~pl~llggh~gGvThL~~~edG--n~lfsGaRk~dk  274 (406)
T KOG2919|consen  219 DSKTLAVGSYGQRVGIYNDDGR----------------------RPLQLLGGHGGGVTHLQWCEDG--NKLFSGARKDDK  274 (406)
T ss_pred             CCcceeeecccceeeeEecCCC----------------------CceeeecccCCCeeeEEeccCc--CeecccccCCCe
Confidence            6668999998888877776654                      3777888999999999999999  67777665 889


Q ss_pred             EEEEecCCCc-eEEEee-c---CCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEE
Q psy10867        209 CKIFDLCTGE-DLLSLI-L---DTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVT  283 (343)
Q Consensus       209 i~~wd~~~~~-~~~~~~-~---~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  283 (343)
                      |..||++..+ ++..+. |   ...-.-....|+++.|++|+.+|.|++||++....          .+..+..+...++
T Consensus       275 Il~WDiR~~~~pv~~L~rhv~~TNQRI~FDld~~~~~LasG~tdG~V~vwdlk~~gn----------~~sv~~~~sd~vN  344 (406)
T KOG2919|consen  275 ILCWDIRYSRDPVYALERHVGDTNQRILFDLDPKGEILASGDTDGSVRVWDLKDLGN----------EVSVTGNYSDTVN  344 (406)
T ss_pred             EEEEeehhccchhhhhhhhccCccceEEEecCCCCceeeccCCCccEEEEecCCCCC----------ccccccccccccc
Confidence            9999998643 333333 2   22233456678999999999999999999987433          2445677889999


Q ss_pred             EEEEccCCCEEEEEeCC
Q psy10867        284 SLSCSITGITLLSSSAD  300 (343)
Q Consensus       284 ~~~~s~~~~~l~s~~~d  300 (343)
                      .++++|-=.++|+++..
T Consensus       345 gvslnP~mpilatssGq  361 (406)
T KOG2919|consen  345 GVSLNPIMPILATSSGQ  361 (406)
T ss_pred             ceecCcccceeeeccCc
Confidence            99999998888888765

>KOG1007|consensus

Probab=99.94  E-value=1.9e-24  Score=159.56  Aligned_cols=253  Identities=18%  Similarity=0.230  Sum_probs=189.3

Q ss_pred             CCeEEEEeCCCccc--c-eecccCCcceEEEEECCCC-CEEEEecC--------CeEEEEEccCC---------ceEEEe
Q psy10867         57 KPMIQAWPVNSQEK--A-QLRLICPGRISSMQASPDA-AYIAVSIE--------TKLHMWQISSG---------RLLATA  115 (343)
Q Consensus        57 ~~~i~iw~~~~~~~--~-~~~~~~~~~v~~~~~s~~~-~~l~~~~d--------~~i~v~~~~~~---------~~~~~~  115 (343)
                      ++.|++.+++....  . +.+..|.+.|..++-+|-. ++|++...        ..+.||.+...         +++..+
T Consensus        39 dNqVhll~~d~e~s~l~skvf~h~agEvw~las~P~d~~ilaT~yn~~s~s~vl~~aaiw~ipe~~~~S~~~tlE~v~~L  118 (370)
T KOG1007|consen   39 DNQVHLLRLDSEGSELLSKVFFHHAGEVWDLASSPFDQRILATVYNDTSDSGVLTGAAIWQIPEPLGQSNSSTLECVASL  118 (370)
T ss_pred             cceeEEEEecCccchhhhhhhhcCCcceehhhcCCCCCceEEEEEeccCCCcceeeEEEEecccccCccccchhhHhhcC
Confidence            47888877665432  2 5666889999999999954 56665422        25889998643         223334


Q ss_pred             c-ccCCCeEEEEEecCCCEEEEecCCCeEEEeecCcccee-eeeecCCCCCCCCccccccceeeeecccccceEEEEeec
Q psy10867        116 S-SHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICK-QTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSK  193 (343)
Q Consensus       116 ~-~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  193 (343)
                      . .+-+.|.|+.|.|++..+++-. |..|.+|++.....+ ..+                 +......+....++-+|+|
T Consensus       119 dteavg~i~cvew~Pns~klasm~-dn~i~l~~l~ess~~vaev-----------------~ss~s~e~~~~ftsg~Wsp  180 (370)
T KOG1007|consen  119 DTEAVGKINCVEWEPNSDKLASMD-DNNIVLWSLDESSKIVAEV-----------------LSSESAEMRHSFTSGAWSP  180 (370)
T ss_pred             CHHHhCceeeEEEcCCCCeeEEec-cCceEEEEcccCcchheee-----------------cccccccccceecccccCC
Confidence            3 4556899999999999998876 789999999886542 211                 1111123566788889999


Q ss_pred             CCCceEEEEeeCCCeEEEEecCCCceEEEee--cCCcEEEEEEcCCCC-EEEEEcCCCcEEEEEeecccccccccccCCC
Q psy10867        194 LGAKSRVASVSHDRTCKIFDLCTGEDLLSLI--LDTRLTCVAFDGTED-NIYMGTSEGVIKSFCLRQVPRTRDHHIQDST  270 (343)
Q Consensus       194 ~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~--~~~~i~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~  270 (343)
                      ..+++.+++ ..|+++..||+++.+....+.  |...+..+.|+|+.+ +|++++.||.|++||++..+.+         
T Consensus       181 HHdgnqv~t-t~d~tl~~~D~RT~~~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~p---------  250 (370)
T KOG1007|consen  181 HHDGNQVAT-TSDSTLQFWDLRTMKKNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFP---------  250 (370)
T ss_pred             CCccceEEE-eCCCcEEEEEccchhhhcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccCCCcc---------
Confidence            554355555 468999999999998888876  778899999999876 5777899999999999975443         


Q ss_pred             CCCccccccCcEEEEEEccC-CCEEEEEeCCCcEEEEecccc-----------------------------eeeeecc-c
Q psy10867        271 SNPDFIGHEKQVTSLSCSIT-GITLLSSSADETLKIWHTISR-----------------------------QCLRTIQ-H  319 (343)
Q Consensus       271 ~~~~~~~~~~~v~~~~~s~~-~~~l~s~~~dg~i~iwd~~~~-----------------------------~~~~~~~-~  319 (343)
                       +..+.+|..+|+++.|+|. .+++++++.|..|.+|...+-                             ..+.++. |
T Consensus       251 -v~el~~HsHWvW~VRfn~~hdqLiLs~~SDs~V~Lsca~svSSE~qi~~~~dese~e~~dseer~kpL~dg~l~tydeh  329 (370)
T KOG1007|consen  251 -VQELPGHSHWVWAVRFNPEHDQLILSGGSDSAVNLSCASSVSSEQQIEFEDDESESEDEDSEERVKPLQDGQLETYDEH  329 (370)
T ss_pred             -ccccCCCceEEEEEEecCccceEEEecCCCceeEEEeccccccccccccccccccCcchhhHHhccccccccccccccc
Confidence             7789999999999999995 467889999999999964310                             1234566 8


Q ss_pred             CCceEEEEEccCCCeeeec
Q psy10867        320 KGPVLGAFLGLLPPAIHDY  338 (343)
Q Consensus       320 ~~~v~~~~~sp~~~~l~~~  338 (343)
                      .+.|.+++||.-.++++++
T Consensus       330 EDSVY~~aWSsadPWiFAS  348 (370)
T KOG1007|consen  330 EDSVYALAWSSADPWIFAS  348 (370)
T ss_pred             ccceEEEeeccCCCeeEEE
Confidence            9999999999888877653

>KOG1188|consensus

Probab=99.94  E-value=3.4e-24  Score=161.72  Aligned_cols=276  Identities=16%  Similarity=0.243  Sum_probs=200.8

Q ss_pred             EEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeC--CceEEEEEcCCCeEEEEeCCCcccce--ecccCC-cceE
Q psy10867          8 AFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLG--NDYVLGVEKGKPMIQAWPVNSQEKAQ--LRLICP-GRIS   82 (343)
Q Consensus         8 ~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~~~~~~~~i~iw~~~~~~~~~--~~~~~~-~~v~   82 (343)
                      +..+-..|.|++||..+++.+..++++.. .+..+.|..  ....+.+++.||+|++||+.......  ....++ .+..
T Consensus        43 vav~lSngsv~lyd~~tg~~l~~fk~~~~-~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~~f~  121 (376)
T KOG1188|consen   43 VAVSLSNGSVRLYDKGTGQLLEEFKGPPA-TTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQSGTPFI  121 (376)
T ss_pred             EEEEecCCeEEEEeccchhhhheecCCCC-cccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCCCCCcce
Confidence            33444578999999999999999999999 999999987  34667777777999999998876552  222344 5677


Q ss_pred             EEEECCCCCEEEEe-----cCCeEEEEEccCCce-EEE-ecccCCCeEEEEEec-CCCEEEEecCCCeEEEeecCcccee
Q psy10867         83 SMQASPDAAYIAVS-----IETKLHMWQISSGRL-LAT-ASSHYQPITIVKWSA-DSNFIVTGGEDGTICVWQLSRLICK  154 (343)
Q Consensus        83 ~~~~s~~~~~l~~~-----~d~~i~v~~~~~~~~-~~~-~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~  154 (343)
                      +++....+++++++     .+-.|.+||++..+. +.. ...|...|++++|+| +.++|++|+.||-|.+||+......
T Consensus       122 ~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~~d~Ee  201 (376)
T KOG1188|consen  122 CLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTKKDNEE  201 (376)
T ss_pred             EeeccCcCCeEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEeecccceEEeeecCCCcch
Confidence            88877778888875     356899999998765 443 457999999999999 6789999999999999999875221


Q ss_pred             eeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCC-------
Q psy10867        155 QTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDT-------  227 (343)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~-------  227 (343)
                                         ..+...-.|...|.++.|..++- +.+.+-+...+..+|+++.+.....+..+.       
T Consensus       202 -------------------DaL~~viN~~sSI~~igw~~~~y-krI~clTH~Etf~~~ele~~~~~~~~~~~~~~~~d~r  261 (376)
T KOG1188|consen  202 -------------------DALLHVINHGSSIHLIGWLSKKY-KRIMCLTHMETFAIYELEDGSEETWLENPDVSADDLR  261 (376)
T ss_pred             -------------------hhHHHhhcccceeeeeeeecCCc-ceEEEEEccCceeEEEccCCChhhcccCccchhhhHH
Confidence                               23444445778899999998764 578899999999999999887654443210       


Q ss_pred             ------cEEEEEEcCCCCEEEEEcC-CCcEEEEEeecccccccccccCCCCCCcccc-ccCcEEEEEEccCCCEEEEEeC
Q psy10867        228 ------RLTCVAFDGTEDNIYMGTS-EGVIKSFCLRQVPRTRDHHIQDSTSNPDFIG-HEKQVTSLSCSITGITLLSSSA  299 (343)
Q Consensus       228 ------~i~~~~~~~~~~~l~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~~~  299 (343)
                            .+...-...+...+++++. -+...++-+.......     ..+....+.+ |..-|.++.|...+..+.+|++
T Consensus       262 ~~~~~dY~I~~~~~~~~~~~~l~g~~~n~~~~~~~~~~~s~~-----~~~~~a~l~g~~~eiVR~i~~~~~~~~l~TGGE  336 (376)
T KOG1188|consen  262 KEDNCDYVINEHSPGDKDTCALAGTDSNKGTIFPLVDTSSGS-----LLTEPAILQGGHEEIVRDILFDVKNDVLYTGGE  336 (376)
T ss_pred             hhhhhhheeecccCCCcceEEEeccccCceeEEEeeeccccc-----ccCccccccCCcHHHHHHHhhhcccceeeccCC
Confidence                  1111111223445555444 6677776655321111     1222445555 7777889999888999999999


Q ss_pred             CCcEEEEecc
Q psy10867        300 DETLKIWHTI  309 (343)
Q Consensus       300 dg~i~iwd~~  309 (343)
                      ||.+.+|..+
T Consensus       337 DG~l~~Wk~~  346 (376)
T KOG1188|consen  337 DGLLQAWKVE  346 (376)
T ss_pred             CceEEEEecC
Confidence            9999999853

>KOG1007|consensus

Probab=99.94  E-value=5.5e-24  Score=157.15  Aligned_cols=273  Identities=16%  Similarity=0.209  Sum_probs=202.4

Q ss_pred             CCeEEEEecCC--ceEE-EEEecCCCCcceEEEEeCC-ceEEEEEcCC-------CeEEEEeCCCc---------cccee
Q psy10867         14 SGAISVWEPKG--GTLL-MSYKGASVLSPHSMCLLGN-DYVLGVEKGK-------PMIQAWPVNSQ---------EKAQL   73 (343)
Q Consensus        14 dg~i~iwd~~~--~~~~-~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~-------~~i~iw~~~~~---------~~~~~   73 (343)
                      |+.|.+-++..  ++.. ..|..|.+ .|..++-+|- .+++++...+       -.+.||.+...         +++..
T Consensus        39 dNqVhll~~d~e~s~l~skvf~h~ag-Evw~las~P~d~~ilaT~yn~~s~s~vl~~aaiw~ipe~~~~S~~~tlE~v~~  117 (370)
T KOG1007|consen   39 DNQVHLLRLDSEGSELLSKVFFHHAG-EVWDLASSPFDQRILATVYNDTSDSGVLTGAAIWQIPEPLGQSNSSTLECVAS  117 (370)
T ss_pred             cceeEEEEecCccchhhhhhhhcCCc-ceehhhcCCCCCceEEEEEeccCCCcceeeEEEEecccccCccccchhhHhhc
Confidence            57777776654  3333 34666677 9999999994 5777765442       25679987543         22222


Q ss_pred             cc-cCCcceEEEEECCCCCEEEEecCCeEEEEEccCCce-EEEec-----ccCCCeEEEEEec--CCCEEEEecCCCeEE
Q psy10867         74 RL-ICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRL-LATAS-----SHYQPITIVKWSA--DSNFIVTGGEDGTIC  144 (343)
Q Consensus        74 ~~-~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~-~~~~~-----~~~~~v~~~~~~~--~~~~l~s~~~dg~i~  144 (343)
                      +. .+-+.|.|+.|.|++..+++-.|+.|.+|++..+.. +..+.     ++....++-+|+|  +++.+++.+ |+++.
T Consensus       118 Ldteavg~i~cvew~Pns~klasm~dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~tt~-d~tl~  196 (370)
T KOG1007|consen  118 LDTEAVGKINCVEWEPNSDKLASMDDNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVATTS-DSTLQ  196 (370)
T ss_pred             CCHHHhCceeeEEEcCCCCeeEEeccCceEEEEcccCcchheeecccccccccceecccccCCCCccceEEEeC-CCcEE
Confidence            32 455689999999999999997799999999988755 33332     3556788899998  888888755 68999


Q ss_pred             EeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCc-eEEEe
Q psy10867        145 VWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGE-DLLSL  223 (343)
Q Consensus       145 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~-~~~~~  223 (343)
                      .||+++.....                     .....|...|..+.|+|+.+ .+|++++.||.|++||.+..+ ++.++
T Consensus       197 ~~D~RT~~~~~---------------------sI~dAHgq~vrdlDfNpnkq-~~lvt~gDdgyvriWD~R~tk~pv~el  254 (370)
T KOG1007|consen  197 FWDLRTMKKNN---------------------SIEDAHGQRVRDLDFNPNKQ-HILVTCGDDGYVRIWDTRKTKFPVQEL  254 (370)
T ss_pred             EEEccchhhhc---------------------chhhhhcceeeeccCCCCce-EEEEEcCCCccEEEEeccCCCcccccc
Confidence            99999875533                     34467999999999999986 789999999999999998654 45555


Q ss_pred             e-cCCcEEEEEEcCCC-CEEEEEcCCCcEEEEEeeccccccccc------------------ccCCCCCCccccccCcEE
Q psy10867        224 I-LDTRLTCVAFDGTE-DNIYMGTSEGVIKSFCLRQVPRTRDHH------------------IQDSTSNPDFIGHEKQVT  283 (343)
Q Consensus       224 ~-~~~~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~v~  283 (343)
                      . |...+.++.|+|.- +++++|+.|..|.+|............                  ......+.++..|...|+
T Consensus       255 ~~HsHWvW~VRfn~~hdqLiLs~~SDs~V~Lsca~svSSE~qi~~~~dese~e~~dseer~kpL~dg~l~tydehEDSVY  334 (370)
T KOG1007|consen  255 PGHSHWVWAVRFNPEHDQLILSGGSDSAVNLSCASSVSSEQQIEFEDDESESEDEDSEERVKPLQDGQLETYDEHEDSVY  334 (370)
T ss_pred             CCCceEEEEEEecCccceEEEecCCCceeEEEeccccccccccccccccccCcchhhHHhcccccccccccccccccceE
Confidence            5 67789999999964 577889999999999876543221111                  112233557888999999


Q ss_pred             EEEEccCCC-EEEEEeCCCcEEEEeccc
Q psy10867        284 SLSCSITGI-TLLSSSADETLKIWHTIS  310 (343)
Q Consensus       284 ~~~~s~~~~-~l~s~~~dg~i~iwd~~~  310 (343)
                      +++||.-.. .+|+-+.||.+.|=.+..
T Consensus       335 ~~aWSsadPWiFASLSYDGRviIs~V~r  362 (370)
T KOG1007|consen  335 ALAWSSADPWIFASLSYDGRVIISSVPR  362 (370)
T ss_pred             EEeeccCCCeeEEEeccCceEEeecCCh
Confidence            999998555 667889999998876643

>KOG1445|consensus

Probab=99.94  E-value=2e-24  Score=175.92  Aligned_cols=146  Identities=16%  Similarity=0.191  Sum_probs=117.5

Q ss_pred             ceEEEEeecCCCceEEEEeeCCCeEEEEecCCCce-------EEEee-cCCcEEEEEEcCC-CCEEEEEcCCCcEEEEEe
Q psy10867        185 PVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGED-------LLSLI-LDTRLTCVAFDGT-EDNIYMGTSEGVIKSFCL  255 (343)
Q Consensus       185 ~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~-------~~~~~-~~~~i~~~~~~~~-~~~l~~~~~d~~i~i~d~  255 (343)
                      .|+.+.|.|-.. ..|+.++.||.|++|.+..+..       ...+. |...|+++.|+|- .+.|++++.|-+|++||+
T Consensus       629 ~vtDl~WdPFD~-~rLAVa~ddg~i~lWr~~a~gl~e~~~tPe~~lt~h~eKI~slRfHPLAadvLa~asyd~Ti~lWDl  707 (1012)
T KOG1445|consen  629 LVTDLHWDPFDD-ERLAVATDDGQINLWRLTANGLPENEMTPEKILTIHGEKITSLRFHPLAADVLAVASYDSTIELWDL  707 (1012)
T ss_pred             eeeecccCCCCh-HHeeecccCceEEEEEeccCCCCcccCCcceeeecccceEEEEEecchhhhHhhhhhccceeeeeeh
Confidence            467777877655 7899999999999999875432       22333 6788999999995 568899999999999999


Q ss_pred             ecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEeccccee-eeecc--cCCceEEEEEccCC
Q psy10867        256 RQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQC-LRTIQ--HKGPVLGAFLGLLP  332 (343)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~-~~~~~--~~~~v~~~~~sp~~  332 (343)
                      .+...           ...+.+|.+.|..++|||+|+.+|+.+.||+|++|+.++++. +..=.  ....-..+.|.-||
T Consensus       708 ~~~~~-----------~~~l~gHtdqIf~~AWSpdGr~~AtVcKDg~~rVy~Prs~e~pv~Eg~gpvgtRgARi~wacdg  776 (1012)
T KOG1445|consen  708 ANAKL-----------YSRLVGHTDQIFGIAWSPDGRRIATVCKDGTLRVYEPRSREQPVYEGKGPVGTRGARILWACDG  776 (1012)
T ss_pred             hhhhh-----------hheeccCcCceeEEEECCCCcceeeeecCceEEEeCCCCCCCccccCCCCccCcceeEEEEecC
Confidence            98654           456889999999999999999999999999999999887653 22222  23444678899999


Q ss_pred             CeeeecccCC
Q psy10867        333 PAIHDYDFTP  342 (343)
Q Consensus       333 ~~l~~~~~~~  342 (343)
                      +++++.+|..
T Consensus       777 r~viv~Gfdk  786 (1012)
T KOG1445|consen  777 RIVIVVGFDK  786 (1012)
T ss_pred             cEEEEecccc
Confidence            9999998864

>KOG1034|consensus

Probab=99.93  E-value=8e-25  Score=164.26  Aligned_cols=283  Identities=14%  Similarity=0.138  Sum_probs=205.6

Q ss_pred             ecCCCCcceEEEEeC-----CceEEEEEcCCCeEEEEeCCCcccceecc-----cCCcceEEEEECCC----CCEEEE-e
Q psy10867         32 KGASVLSPHSMCLLG-----NDYVLGVEKGKPMIQAWPVNSQEKAQLRL-----ICPGRISSMQASPD----AAYIAV-S   96 (343)
Q Consensus        32 ~~~~~~~v~~~~~~~-----~~~~~~~~~~~~~i~iw~~~~~~~~~~~~-----~~~~~v~~~~~s~~----~~~l~~-~   96 (343)
                      +.|.. ++..++|++     +-.++++.+. ..+.+|+....-.++.+.     .+......++|+-|    ..++|+ |
T Consensus        35 ed~~~-~I~gv~fN~~~~~~e~~vfatvG~-~rvtiy~c~~d~~ir~lq~y~D~d~~Esfytcsw~yd~~~~~p~la~~G  112 (385)
T KOG1034|consen   35 EDHNK-PIFGVAFNSFLGCDEPQVFATVGG-NRVTIYECPGDGGIRLLQSYADEDHDESFYTCSWSYDSNTGNPFLAAGG  112 (385)
T ss_pred             ccCCC-ccceeeeehhcCCCCCceEEEeCC-cEEEEEEECCccceeeeeeccCCCCCcceEEEEEEecCCCCCeeEEeec
Confidence            34555 999999984     2356666666 689999876544332221     36677888888754    346665 7


Q ss_pred             cCCeEEEEEccCCceEEEecccCCCeEEEEEec-CCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccce
Q psy10867         97 IETKLHMWQISSGRLLATASSHYQPITIVKWSA-DSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEP  175 (343)
Q Consensus        97 ~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (343)
                      .-|.|+|.|+.++++...+.+|.+.|..+.++| +.+++++++.|..|++|++++..++..                   
T Consensus       113 ~~GvIrVid~~~~~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~V-------------------  173 (385)
T KOG1034|consen  113 YLGVIRVIDVVSGQCSKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAV-------------------  173 (385)
T ss_pred             ceeEEEEEecchhhhccceeccCccchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEE-------------------
Confidence            889999999999999999999999999999999 457899999999999999999887663                   


Q ss_pred             eeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEe-----------------------------ecC
Q psy10867        176 LHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSL-----------------------------ILD  226 (343)
Q Consensus       176 ~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~-----------------------------~~~  226 (343)
                      ..-..+|...|.++.|++++  .++++++.|..|++|++...+....+                             .|.
T Consensus       174 fGG~egHrdeVLSvD~~~~g--d~i~ScGmDhslk~W~l~~~~f~~~lE~s~~~~~~~t~~pfpt~~~~fp~fst~diHr  251 (385)
T KOG1034|consen  174 FGGVEGHRDEVLSVDFSLDG--DRIASCGMDHSLKLWRLNVKEFKNKLELSITYSPNKTTRPFPTPKTHFPDFSTTDIHR  251 (385)
T ss_pred             ecccccccCcEEEEEEcCCC--CeeeccCCcceEEEEecChhHHhhhhhhhcccCCCCccCcCCcccccccccccccccc
Confidence            34557899999999999999  79999999999999999743211110                             123


Q ss_pred             CcEEEEEEcCCCCEEEEEcCCCcEEEEEeeccccccc-ccc--cCCCCCCccccccCcEEEEE--EccCCCEEEEEeCCC
Q psy10867        227 TRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRD-HHI--QDSTSNPDFIGHEKQVTSLS--CSITGITLLSSSADE  301 (343)
Q Consensus       227 ~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~--~~~~~~~~~~~~~~~v~~~~--~s~~~~~l~s~~~dg  301 (343)
                      ..|.|+.|-  |+++++-+-++.|..|.....+.... ...  ...+.+..+.-....|+-+.  |.|-++.||.|...|
T Consensus       252 nyVDCvrw~--gd~ilSkscenaI~~w~pgkl~e~~~~vkp~es~~Ti~~~~~~~~c~iWfirf~~d~~~~~la~gnq~g  329 (385)
T KOG1034|consen  252 NYVDCVRWF--GDFILSKSCENAIVCWKPGKLEESIHNVKPPESATTILGEFDYPMCDIWFIRFAFDPWQKMLALGNQSG  329 (385)
T ss_pred             chHHHHHHH--hhheeecccCceEEEEecchhhhhhhccCCCccceeeeeEeccCccceEEEEEeecHHHHHHhhccCCC
Confidence            334444554  67888888899999998743222111 000  00111333333445566665  456678999999999


Q ss_pred             cEEEEecccceee--eecc---cCCceEEEEEccCCCeeeecc
Q psy10867        302 TLKIWHTISRQCL--RTIQ---HKGPVLGAFLGLLPPAIHDYD  339 (343)
Q Consensus       302 ~i~iwd~~~~~~~--~~~~---~~~~v~~~~~sp~~~~l~~~~  339 (343)
                      .|.+||++..++.  .++.   ....|+..+||.|+..|+..+
T Consensus       330 ~v~vwdL~~~ep~~~ttl~~s~~~~tVRQ~sfS~dgs~lv~vc  372 (385)
T KOG1034|consen  330 KVYVWDLDNNEPPKCTTLTHSKSGSTVRQTSFSRDGSILVLVC  372 (385)
T ss_pred             cEEEEECCCCCCccCceEEeccccceeeeeeecccCcEEEEEe
Confidence            9999999987653  2222   456799999999999988654

>KOG0270|consensus

Probab=99.93  E-value=2.3e-24  Score=167.83  Aligned_cols=245  Identities=12%  Similarity=0.231  Sum_probs=186.4

Q ss_pred             cceEEEEeC-------CceEEEEEcCCCeEEEEeCCCcccc---------------------eecccCCcceEEEEECCC
Q psy10867         38 SPHSMCLLG-------NDYVLGVEKGKPMIQAWPVNSQEKA---------------------QLRLICPGRISSMQASPD   89 (343)
Q Consensus        38 ~v~~~~~~~-------~~~~~~~~~~~~~i~iw~~~~~~~~---------------------~~~~~~~~~v~~~~~s~~   89 (343)
                      ...|++|..       -|.++|.|.-+..|.|||+.=...+                     ....+|++.|..++|+..
T Consensus       175 fPLC~ewld~~~~~~~~gNyvAiGtmdp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~  254 (463)
T KOG0270|consen  175 FPLCIEWLDHGSKSGGAGNYVAIGTMDPEIEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRN  254 (463)
T ss_pred             cchhhhhhhcCCCCCCCcceEEEeccCceeEEeccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhccc
Confidence            345666642       2589999999999999997521100                     012268888889999875


Q ss_pred             C-CEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEec-CCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCC
Q psy10867         90 A-AYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSA-DSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSG  166 (343)
Q Consensus        90 ~-~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~  166 (343)
                      - +.||+ +.|.+|.+||+.++++..++..|.+.|.++.|+| .+..|++|+.|++|.+.|.+......           
T Consensus       255 ~~nVLaSgsaD~TV~lWD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~-----------  323 (463)
T KOG0270|consen  255 FRNVLASGSADKTVKLWDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSG-----------  323 (463)
T ss_pred             cceeEEecCCCceEEEEEcCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCccccC-----------
Confidence            4 46666 6899999999999999999999999999999999 66799999999999999999632111           


Q ss_pred             CccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCC-ceEEEee-cCCcEEEEEEcCCC-CEEEE
Q psy10867        167 KGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTG-EDLLSLI-LDTRLTCVAFDGTE-DNIYM  243 (343)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~-~~~~~~~-~~~~i~~~~~~~~~-~~l~~  243 (343)
                                 ..-.-.+.|..++|.|..+ ..+++++.||+++-+|+|.. ++++++. |..+|.++++++.- .++++
T Consensus       324 -----------~~wk~~g~VEkv~w~~~se-~~f~~~tddG~v~~~D~R~~~~~vwt~~AHd~~ISgl~~n~~~p~~l~t  391 (463)
T KOG0270|consen  324 -----------KEWKFDGEVEKVAWDPHSE-NSFFVSTDDGTVYYFDIRNPGKPVWTLKAHDDEISGLSVNIQTPGLLST  391 (463)
T ss_pred             -----------ceEEeccceEEEEecCCCc-eeEEEecCCceEEeeecCCCCCceeEEEeccCCcceEEecCCCCcceee
Confidence                       1112456789999999876 78889999999999999976 7888887 89999999999865 46788


Q ss_pred             EcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCC-EEEEEeCCCcEEEEecccceee
Q psy10867        244 GTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGI-TLLSSSADETLKIWHTISRQCL  314 (343)
Q Consensus       244 ~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~s~~~dg~i~iwd~~~~~~~  314 (343)
                      ++.|+.|++|++.........       ...+  .-+...|.++.|+-. ++|.|+..+.++|||+.+...+
T Consensus       392 ~s~d~~Vklw~~~~~~~~~v~-------~~~~--~~~rl~c~~~~~~~a~~la~GG~k~~~~vwd~~~~~~V  454 (463)
T KOG0270|consen  392 ASTDKVVKLWKFDVDSPKSVK-------EHSF--KLGRLHCFALDPDVAFTLAFGGEKAVLRVWDIFTNSPV  454 (463)
T ss_pred             ccccceEEEEeecCCCCcccc-------cccc--cccceeecccCCCcceEEEecCccceEEEeecccChhH
Confidence            999999999998764321111       1111  112356667777654 6778888889999999876544

>KOG4328|consensus

Probab=99.93  E-value=7.2e-24  Score=165.77  Aligned_cols=271  Identities=15%  Similarity=0.141  Sum_probs=199.1

Q ss_pred             eEEEecCCCCeEEEEecCCc----eEEEEEecCCCCcceEEEEeCCc--eEEEEEcCCCeEEEEeCCCcccceeccc--C
Q psy10867          6 EVAFSYDGSGAISVWEPKGG----TLLMSYKGASVLSPHSMCLLGND--YVLGVEKGKPMIQAWPVNSQEKAQLRLI--C   77 (343)
Q Consensus         6 ~~~~s~~~dg~i~iwd~~~~----~~~~~~~~~~~~~v~~~~~~~~~--~~~~~~~~~~~i~iw~~~~~~~~~~~~~--~   77 (343)
                      .+++.++..|+|-+||+.+.    ..+..+..|.. +|.++.|+|..  +++.++.+ |+|++-|+++......+..  .
T Consensus       201 ~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~-~Vs~l~F~P~n~s~i~ssSyD-GtiR~~D~~~~i~e~v~s~~~d  278 (498)
T KOG4328|consen  201 KLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSG-PVSGLKFSPANTSQIYSSSYD-GTIRLQDFEGNISEEVLSLDTD  278 (498)
T ss_pred             eEEEEccCCCcEEEEecCCCCCccCceEEeccCCc-cccceEecCCChhheeeeccC-ceeeeeeecchhhHHHhhcCcc
Confidence            34555566799999999532    34566788888 99999999964  55555554 9999999998765444333  4


Q ss_pred             CcceEEEEECCCCCEEE-EecCCeEEEEEccCCce-EEEecccCCCeEEEEEec-CCCEEEEecCCCeEEEeecCcccee
Q psy10867         78 PGRISSMQASPDAAYIA-VSIETKLHMWQISSGRL-LATASSHYQPITIVKWSA-DSNFIVTGGEDGTICVWQLSRLICK  154 (343)
Q Consensus        78 ~~~v~~~~~s~~~~~l~-~~~d~~i~v~~~~~~~~-~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~  154 (343)
                      ...+..+.|+.+...+. +..=|...+||++++.. ...+.-|...|..++++| ...+|++++.|++++|||++.....
T Consensus       279 ~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s~~~~~~lh~kKI~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K  358 (498)
T KOG4328|consen  279 NIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGSEYENLRLHKKKITSVALNPVCPWFLATASLDQTAKIWDLRQLRGK  358 (498)
T ss_pred             ceeeeeccccCCCccEEEeecccceEEEEeecCCccchhhhhhhcccceeecCCCCchheeecccCcceeeeehhhhcCC
Confidence            45577788887665444 45556999999988754 566777888999999999 5568999999999999999986432


Q ss_pred             eeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEec----CCCceEEEeecCCc--
Q psy10867        155 QTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDL----CTGEDLLSLILDTR--  228 (343)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~----~~~~~~~~~~~~~~--  228 (343)
                      .                  .++.....|...|.+..|+|.+  -.|++.+.|..|+|||.    ..-....++.|...  
T Consensus       359 ~------------------sp~lst~~HrrsV~sAyFSPs~--gtl~TT~~D~~IRv~dss~~sa~~~p~~~I~Hn~~t~  418 (498)
T KOG4328|consen  359 A------------------SPFLSTLPHRRSVNSAYFSPSG--GTLLTTCQDNEIRVFDSSCISAKDEPLGTIPHNNRTG  418 (498)
T ss_pred             C------------------CcceecccccceeeeeEEcCCC--CceEeeccCCceEEeecccccccCCccceeeccCccc
Confidence            2                  1345556799999999999998  56999999999999998    34455666665432  


Q ss_pred             ----EEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccc-cCcEEE-EEEccCCCEEE-EEeCCC
Q psy10867        229 ----LTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGH-EKQVTS-LSCSITGITLL-SSSADE  301 (343)
Q Consensus       229 ----i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~-~~~s~~~~~l~-s~~~dg  301 (343)
                          .....|.|+..++++|-.-..|-++|-...+...++           ... ...|.+ ..|+|-+..++ .++..|
T Consensus       419 RwlT~fKA~W~P~~~li~vg~~~r~IDv~~~~~~q~v~el-----------~~P~~~tI~~vn~~HP~~~~~~aG~~s~G  487 (498)
T KOG4328|consen  419 RWLTPFKAAWDPDYNLIVVGRYPRPIDVFDGNGGQMVCEL-----------HDPESSTIPSVNEFHPMRDTLAAGGNSSG  487 (498)
T ss_pred             ccccchhheeCCCccEEEEeccCcceeEEcCCCCEEeeec-----------cCccccccccceeecccccceeccCCccc
Confidence                456789999999999999999999998775533221           111 113333 46999887444 555678


Q ss_pred             cEEEEecc
Q psy10867        302 TLKIWHTI  309 (343)
Q Consensus       302 ~i~iwd~~  309 (343)
                      .|+||--+
T Consensus       488 ki~vft~k  495 (498)
T KOG4328|consen  488 KIYVFTNK  495 (498)
T ss_pred             eEEEEecC
Confidence            88888643

>KOG0270|consensus

Probab=99.93  E-value=4.8e-24  Score=166.11  Aligned_cols=265  Identities=17%  Similarity=0.253  Sum_probs=190.8

Q ss_pred             EEEEeCCceEEEEEcC-C--CeEEEEeCCCcccceecccC----CcceEEEEECC-------CCCEEEE-ecCCeEEEEE
Q psy10867         41 SMCLLGNDYVLGVEKG-K--PMIQAWPVNSQEKAQLRLIC----PGRISSMQASP-------DAAYIAV-SIETKLHMWQ  105 (343)
Q Consensus        41 ~~~~~~~~~~~~~~~~-~--~~i~iw~~~~~~~~~~~~~~----~~~v~~~~~s~-------~~~~l~~-~~d~~i~v~~  105 (343)
                      .+..-|...+++++.. +  ..+.+|=.+.... ..+..|    .....|++|..       .|+++|. +.+..|.|||
T Consensus       130 e~~V~psDnlIl~ar~eddvs~LEvYVyn~~e~-nlYvHHD~ilpafPLC~ewld~~~~~~~~gNyvAiGtmdp~IeIWD  208 (463)
T KOG0270|consen  130 EEQVKPSDNLILCARNEDDVSYLEVYVYNEEEE-NLYVHHDFILPAFPLCIEWLDHGSKSGGAGNYVAIGTMDPEIEIWD  208 (463)
T ss_pred             cceeccCCcEEEEeeccCCceEEEEEEEcCCCc-ceeEecceeccCcchhhhhhhcCCCCCCCcceEEEeccCceeEEec
Confidence            4566675555555533 2  2444443332221 111122    22335666632       3579997 5789999999


Q ss_pred             ccCCc---eEE------------------EecccCCCeEEEEEecC-CCEEEEecCCCeEEEeecCccceeeeeecCCCC
Q psy10867        106 ISSGR---LLA------------------TASSHYQPITIVKWSAD-SNFIVTGGEDGTICVWQLSRLICKQTVAFGIPG  163 (343)
Q Consensus       106 ~~~~~---~~~------------------~~~~~~~~v~~~~~~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~  163 (343)
                      +.-..   +..                  ...+|+..|..+.|+.+ .+.|++|+.|.+|++||+.++++          
T Consensus       209 LDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~~~nVLaSgsaD~TV~lWD~~~g~p----------  278 (463)
T KOG0270|consen  209 LDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRNFRNVLASGSADKTVKLWDVDTGKP----------  278 (463)
T ss_pred             cccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhccccceeEEecCCCceEEEEEcCCCCc----------
Confidence            86211   111                  12368888889999774 46899999999999999999864          


Q ss_pred             CCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCC-ceEEEeecCCcEEEEEEcCCCC-EE
Q psy10867        164 SSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTG-EDLLSLILDTRLTCVAFDGTED-NI  241 (343)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~-~~~~~~~~~~~i~~~~~~~~~~-~l  241 (343)
                                  ...+..|...|.++.|+|..+ .+|++|+.|+++.+.|+|.. ..-..+...+.|..++|.|... .+
T Consensus       279 ------------~~s~~~~~k~Vq~l~wh~~~p-~~LLsGs~D~~V~l~D~R~~~~s~~~wk~~g~VEkv~w~~~se~~f  345 (463)
T KOG0270|consen  279 ------------KSSITHHGKKVQTLEWHPYEP-SVLLSGSYDGTVALKDCRDPSNSGKEWKFDGEVEKVAWDPHSENSF  345 (463)
T ss_pred             ------------ceehhhcCCceeEEEecCCCc-eEEEeccccceEEeeeccCccccCceEEeccceEEEEecCCCceeE
Confidence                        445557999999999999877 89999999999999999943 3345566788999999999764 67


Q ss_pred             EEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCC-CEEEEEeCCCcEEEEecccceeeeecc--
Q psy10867        242 YMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITG-ITLLSSSADETLKIWHTISRQCLRTIQ--  318 (343)
Q Consensus       242 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~--  318 (343)
                      ++++.||.++-+|++...          +++.+++.|.++|.++++++.- .++++++.|+.|++|++..-.......  
T Consensus       346 ~~~tddG~v~~~D~R~~~----------~~vwt~~AHd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~~~~~~~v~~~~  415 (463)
T KOG0270|consen  346 FVSTDDGTVYYFDIRNPG----------KPVWTLKAHDDEISGLSVNIQTPGLLSTASTDKVVKLWKFDVDSPKSVKEHS  415 (463)
T ss_pred             EEecCCceEEeeecCCCC----------CceeEEEeccCCcceEEecCCCCcceeeccccceEEEEeecCCCCccccccc
Confidence            778899999999999864          4477899999999999998854 578899999999999987544432222  


Q ss_pred             -cCCceEEEEEccCCCeeeecc
Q psy10867        319 -HKGPVLGAFLGLLPPAIHDYD  339 (343)
Q Consensus       319 -~~~~v~~~~~sp~~~~l~~~~  339 (343)
                       ..+...|+++.|+-.++++.+
T Consensus       416 ~~~~rl~c~~~~~~~a~~la~G  437 (463)
T KOG0270|consen  416 FKLGRLHCFALDPDVAFTLAFG  437 (463)
T ss_pred             ccccceeecccCCCcceEEEec
Confidence             234567788888877765543

>KOG1273|consensus

Probab=99.93  E-value=3.3e-24  Score=160.22  Aligned_cols=225  Identities=17%  Similarity=0.193  Sum_probs=172.3

Q ss_pred             eEEEEECCCCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeec
Q psy10867         81 ISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAF  159 (343)
Q Consensus        81 v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~  159 (343)
                      ..++.|++-|.+||. +.||.|.|||+.+...-..+.+|..+|++++|+++|+.|++++.|..|.+||+..+.+...+. 
T Consensus        26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~rir-  104 (405)
T KOG1273|consen   26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFRIARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKRIR-  104 (405)
T ss_pred             cceEEeccCcceeeeeccCCcEEEEEccccchhhhhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCCceeEEE-
Confidence            789999999999997 689999999999999888999999999999999999999999999999999999987655443 


Q ss_pred             CCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEe-ec----CCcEEEEEE
Q psy10867        160 GIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSL-IL----DTRLTCVAF  234 (343)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~-~~----~~~i~~~~~  234 (343)
                                            ...+|....|+|...+..+++- .+..-.+-++..++....- ..    .....+..|
T Consensus       105 ----------------------f~spv~~~q~hp~k~n~~va~~-~~~sp~vi~~s~~~h~~Lp~d~d~dln~sas~~~f  161 (405)
T KOG1273|consen  105 ----------------------FDSPVWGAQWHPRKRNKCVATI-MEESPVVIDFSDPKHSVLPKDDDGDLNSSASHGVF  161 (405)
T ss_pred             ----------------------ccCccceeeeccccCCeEEEEE-ecCCcEEEEecCCceeeccCCCccccccccccccc
Confidence                                  5678999999998764444443 3333555555543221111 11    122334469


Q ss_pred             cCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCcccccc-CcEEEEEEccCCCEEEEEeCCCcEEEEeccc---
Q psy10867        235 DGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHE-KQVTSLSCSITGITLLSSSADETLKIWHTIS---  310 (343)
Q Consensus       235 ~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~---  310 (343)
                      .+.|+++++|...|.+.++|..+.+...           .++-.. ..|..+.++..|++|+.-+.|..||.|+++.   
T Consensus       162 dr~g~yIitGtsKGkllv~~a~t~e~va-----------s~rits~~~IK~I~~s~~g~~liiNtsDRvIR~ye~~di~~  230 (405)
T KOG1273|consen  162 DRRGKYIITGTSKGKLLVYDAETLECVA-----------SFRITSVQAIKQIIVSRKGRFLIINTSDRVIRTYEISDIDD  230 (405)
T ss_pred             cCCCCEEEEecCcceEEEEecchheeee-----------eeeechheeeeEEEEeccCcEEEEecCCceEEEEehhhhcc
Confidence            9999999999999999999999865533           233223 6788899999999999999999999999862   


Q ss_pred             ----ce--eeeecc---cCCceEEEEEccCCCeeeeccc
Q psy10867        311 ----RQ--CLRTIQ---HKGPVLGAFLGLLPPAIHDYDF  340 (343)
Q Consensus       311 ----~~--~~~~~~---~~~~v~~~~~sp~~~~l~~~~~  340 (343)
                          ++  +.+.+.   ..-.=.++.||.+|.|+.+++-
T Consensus       231 ~~r~~e~e~~~K~qDvVNk~~Wk~ccfs~dgeYv~a~s~  269 (405)
T KOG1273|consen  231 EGRDGEVEPEHKLQDVVNKLQWKKCCFSGDGEYVCAGSA  269 (405)
T ss_pred             cCccCCcChhHHHHHHHhhhhhhheeecCCccEEEeccc
Confidence                11  112332   2334467899999999998874

>KOG1009|consensus

Probab=99.93  E-value=1.9e-23  Score=161.09  Aligned_cols=294  Identities=14%  Similarity=0.150  Sum_probs=201.0

Q ss_pred             EEEecCCCCeEEEEecCCc---------eEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCC--------C--
Q psy10867          7 VAFSYDGSGAISVWEPKGG---------TLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVN--------S--   67 (343)
Q Consensus         7 ~~~s~~~dg~i~iwd~~~~---------~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~--------~--   67 (343)
                      .++|+++|..|++|-+..+         +.+..+..|.. +|+++.|+|+|.++|+|.++|.+.+|...        +  
T Consensus        28 ~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~-aVN~vRf~p~gelLASg~D~g~v~lWk~~~~~~~~~d~e~  106 (434)
T KOG1009|consen   28 KLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTR-AVNVVRFSPDGELLASGGDGGEVFLWKQGDVRIFDADTEA  106 (434)
T ss_pred             ceecccCccceeeeeeeecCCCCCceeEEEeecccCCcc-eeEEEEEcCCcCeeeecCCCceEEEEEecCcCCccccchh
Confidence            6789999999999987643         23456788998 99999999999999999999999999765        2  


Q ss_pred             ------cccceecccCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCC
Q psy10867         68 ------QEKAQLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGED  140 (343)
Q Consensus        68 ------~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d  140 (343)
                            ....+.+.+|...|..++|+|++.++++ +.|+.+++||+..|.....+..|...+..++|.|-++++++-+.|
T Consensus       107 ~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~~G~l~~~~~dh~~yvqgvawDpl~qyv~s~s~d  186 (434)
T KOG1009|consen  107 DLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVHAGQLLAILDDHEHYVQGVAWDPLNQYVASKSSD  186 (434)
T ss_pred             hhCccceEEEEEecccccchhhhhccCCCceeeeeeccceEEEEEeccceeEeeccccccccceeecchhhhhhhhhccC
Confidence                  1122445589999999999999999997 689999999999999999999999999999999999999999999


Q ss_pred             CeEEEeecCccceeeeeec-CCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeC----C-----CeEE
Q psy10867        141 GTICVWQLSRLICKQTVAF-GIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSH----D-----RTCK  210 (343)
Q Consensus       141 g~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~----d-----~~i~  210 (343)
                      ...+.+.+........... ..+........+....+..-..-......++|+|+|  .++++.+.    .     +..+
T Consensus       187 r~~~~~~~~~~~~~~~~~~~~m~~~~~~~~e~~s~rLfhDeTlksFFrRlsfTPdG--~llvtPag~~~~g~~~~~n~tY  264 (434)
T KOG1009|consen  187 RHPEGFSAKLKQVIKRHGLDIMPAKAFNEREGKSTRLFHDETLKSFFRRLSFTPDG--SLLVTPAGLFKVGGGVFRNTSY  264 (434)
T ss_pred             cccceeeeeeeeeeeeeeeeEeeecccCCCCcceeeeeecCchhhhhhhcccCCCC--cEEEcccceeeeCCceeeceeE
Confidence            8888887766554433321 001111100000000111111223345678899999  67776432    1     2234


Q ss_pred             EEecCC-CceEEEee-cCCcEEEEEEcC-----------------CCCEEEEEcCCCcEEEEEeecccccccccccCCCC
Q psy10867        211 IFDLCT-GEDLLSLI-LDTRLTCVAFDG-----------------TEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTS  271 (343)
Q Consensus       211 ~wd~~~-~~~~~~~~-~~~~i~~~~~~~-----------------~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~  271 (343)
                      +|+-.. .++...+. ...+...+.|+|                 -.+.+++-...+.|++||.+.......        
T Consensus       265 vfsrk~l~rP~~~lp~~~k~~lavr~~pVy~elrp~~~~~~~~~lpyrlvfaiAt~~svyvydtq~~~P~~~--------  336 (434)
T KOG1009|consen  265 VFSRKDLKRPAARLPSPKKPALAVRFSPVYYELRPLSSEKFLFVLPYRLVFAIATKNSVYVYDTQTLEPLAV--------  336 (434)
T ss_pred             eeccccccCceeecCCCCcceEEEEeeeeEEEeccccccccccccccceEEEEeecceEEEeccccccceEE--------
Confidence            444221 11222222 122333444433                 112333334466799999887433211        


Q ss_pred             CCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEeccccee
Q psy10867        272 NPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQC  313 (343)
Q Consensus       272 ~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~  313 (343)
                        .-.-|-..++.++|++||..|+..|.||..-+-.++..++
T Consensus       337 --v~nihy~~iTDiaws~dg~~l~vSS~DGyCS~vtfe~~el  376 (434)
T KOG1009|consen  337 --VDNIHYSAITDIAWSDDGSVLLVSSTDGFCSLVTFEPWEL  376 (434)
T ss_pred             --EeeeeeeeecceeecCCCcEEEEeccCCceEEEEEcchhc
Confidence              1234788999999999999999999999888877665443

>COG2319 FOG: WD40 repeat [General function prediction only]

Probab=99.92  E-value=2.5e-20  Score=159.19  Aligned_cols=291  Identities=26%  Similarity=0.390  Sum_probs=230.7

Q ss_pred             cCCCCeEEEEecCC-ceEEEEEecCCCCcceEEEEeCCceEEEEEcC-CCeEEEEeCCCcccceecccCCcceEEEEECC
Q psy10867         11 YDGSGAISVWEPKG-GTLLMSYKGASVLSPHSMCLLGNDYVLGVEKG-KPMIQAWPVNSQEKAQLRLICPGRISSMQASP   88 (343)
Q Consensus        11 ~~~dg~i~iwd~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~   88 (343)
                      .+.++.+.+|+... ......+..|.. .|..++|+|++..++.+.. ++.+++|+...+.....+..|...|.+++|+|
T Consensus       130 ~~~d~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  208 (466)
T COG2319         130 SSLDGTVKLWDLSTPGKLIRTLEGHSE-SVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSP  208 (466)
T ss_pred             CCCCccEEEEEecCCCeEEEEEecCcc-cEEEEEECCCCCEEEecCCCCCceEEEEcCCCceEEeeccCCCceEEEEEcC
Confidence            44489999999988 888999999998 9999999999987777764 79999999998777777778999999999999


Q ss_pred             CCC-EEEE-ecCCeEEEEEccCCceEE-EecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCC
Q psy10867         89 DAA-YIAV-SIETKLHMWQISSGRLLA-TASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSS  165 (343)
Q Consensus        89 ~~~-~l~~-~~d~~i~v~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~  165 (343)
                      ++. ++++ +.|+.|++||...+.... .+..|.... ...|+|++..+++++.|+.+++|+......            
T Consensus       209 ~~~~~~~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~------------  275 (466)
T COG2319         209 DGGLLIASGSSDGTIRLWDLSTGKLLRSTLSGHSDSV-VSSFSPDGSLLASGSSDGTIRLWDLRSSSS------------  275 (466)
T ss_pred             CcceEEEEecCCCcEEEEECCCCcEEeeecCCCCcce-eEeECCCCCEEEEecCCCcEEEeeecCCCc------------
Confidence            998 5556 689999999988888877 688888875 448999998899999999999999987643            


Q ss_pred             CCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee---cCCcEEEEEEcCCCCEEE
Q psy10867        166 GKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI---LDTRLTCVAFDGTEDNIY  242 (343)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~---~~~~i~~~~~~~~~~~l~  242 (343)
                               .......|...+.++.|.|++  ..+++++.|+.+.+||..+........   +...+..+.+.+++..++
T Consensus       276 ---------~~~~~~~~~~~v~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  344 (466)
T COG2319         276 ---------LLRTLSGHSSSVLSVAFSPDG--KLLASGSSDGTVRLWDLETGKLLSSLTLKGHEGPVSSLSFSPDGSLLV  344 (466)
T ss_pred             ---------EEEEEecCCccEEEEEECCCC--CEEEEeeCCCcEEEEEcCCCceEEEeeecccCCceEEEEECCCCCEEE
Confidence                     112225678999999999976  567778888999999998887665554   455689999943335666


Q ss_pred             EE-cCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEE-EeCCCcEEEEecccceeeeecccC
Q psy10867        243 MG-TSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLS-SSADETLKIWHTISRQCLRTIQHK  320 (343)
Q Consensus       243 ~~-~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s-~~~dg~i~iwd~~~~~~~~~~~~~  320 (343)
                      .+ ..|+.+.+|++.....           ...... ...+..+.+++ ...+.. +..++.+.+|+.............
T Consensus       345 ~~~~~d~~~~~~~~~~~~~-----------~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  411 (466)
T COG2319         345 SGGSDDGTIRLWDLRTGKP-----------LKTLEG-HSNVLSVSFSP-DGRVVSSGSTDGTVRLWDLSTGSLLRNLDGH  411 (466)
T ss_pred             EeecCCCcEEeeecCCCce-----------eEEecC-CceEEEEEECC-CCCEEEEecCCCceEEEecccCeeeeeccCC
Confidence            65 6788999999887541           111111 11278888988 544444 688999999999988887777744


Q ss_pred             -CceEEEEEccCCCeeeecc
Q psy10867        321 -GPVLGAFLGLLPPAIHDYD  339 (343)
Q Consensus       321 -~~v~~~~~sp~~~~l~~~~  339 (343)
                       ..+....+++++..+++++
T Consensus       412 ~~~~~~~~~~~~~~~~~~~~  431 (466)
T COG2319         412 TSRVTSLDFSPDGKSLASGS  431 (466)
T ss_pred             CCcEEEEEECCCCcEEEEec
Confidence             8899999999999987643

>KOG1538|consensus

Probab=99.91  E-value=1.5e-22  Score=165.99  Aligned_cols=260  Identities=11%  Similarity=0.090  Sum_probs=207.1

Q ss_pred             cceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCCceEEEec
Q psy10867         38 SPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATAS  116 (343)
Q Consensus        38 ~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~  116 (343)
                      .|..++|-|||.-+..+.+ ..+.+||.+.|...+.+.+|.+.|++++|+.||+.+|+ +.|..|.+|+..-...+ .+ 
T Consensus        14 ci~d~afkPDGsqL~lAAg-~rlliyD~ndG~llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~klEG~L-kY-   90 (1081)
T KOG1538|consen   14 CINDIAFKPDGTQLILAAG-SRLLVYDTSDGTLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLEGIL-KY-   90 (1081)
T ss_pred             chheeEECCCCceEEEecC-CEEEEEeCCCcccccccccccceEEEEEEccCCceeccCCCceeEEEeccccccee-ee-
Confidence            7899999999976666666 58999999999999999999999999999999999998 57999999986433222 22 


Q ss_pred             ccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCC
Q psy10867        117 SHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGA  196 (343)
Q Consensus       117 ~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  196 (343)
                      .|.+.|.|+.|+|-.+.|++++- ...-+|.........                        ......+.+.+|..+| 
T Consensus        91 SH~D~IQCMsFNP~~h~LasCsL-sdFglWS~~qK~V~K------------------------~kss~R~~~CsWtnDG-  144 (1081)
T KOG1538|consen   91 SHNDAIQCMSFNPITHQLASCSL-SDFGLWSPEQKSVSK------------------------HKSSSRIICCSWTNDG-  144 (1081)
T ss_pred             ccCCeeeEeecCchHHHhhhcch-hhccccChhhhhHHh------------------------hhhheeEEEeeecCCC-
Confidence            59999999999999999999886 456788776532211                        1234578888999999 


Q ss_pred             ceEEEEeeCCCeEEEEecCCCceEEEee----cCCcEEEEEEcCCC-----CEEEEEcCCCcEEEEEeeccccccccccc
Q psy10867        197 KSRVASVSHDRTCKIFDLCTGEDLLSLI----LDTRLTCVAFDGTE-----DNIYMGTSEGVIKSFCLRQVPRTRDHHIQ  267 (343)
Q Consensus       197 ~~~l~~~~~d~~i~~wd~~~~~~~~~~~----~~~~i~~~~~~~~~-----~~l~~~~~d~~i~i~d~~~~~~~~~~~~~  267 (343)
                       ++++.|-.+|+|.+-+ .+++....+.    .+++|.+++|+|..     ..+++...+.++.++.+......      
T Consensus       145 -qylalG~~nGTIsiRN-k~gEek~~I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~DW~qTLSFy~LsG~~Ig------  216 (1081)
T KOG1538|consen  145 -QYLALGMFNGTISIRN-KNGEEKVKIERPGGSNSPIWSICWNPSSGEGRNDILAVADWGQTLSFYQLSGKQIG------  216 (1081)
T ss_pred             -cEEEEeccCceEEeec-CCCCcceEEeCCCCCCCCceEEEecCCCCCCccceEEEEeccceeEEEEecceeec------
Confidence             8999999999999986 4565554444    36689999999963     47888888888888887653221      


Q ss_pred             CCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc-cCCceEEEEEccCCCeeeecccC
Q psy10867        268 DSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVLGAFLGLLPPAIHDYDFT  341 (343)
Q Consensus       268 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~~  341 (343)
                            .-+.-.-...|+.+-++|.++..|+.|+.+++|- +.|-.+.++. ....|+.++..|++++.+.++..
T Consensus       217 ------k~r~L~FdP~CisYf~NGEy~LiGGsdk~L~~fT-R~GvrLGTvg~~D~WIWtV~~~PNsQ~v~~GCqD  284 (1081)
T KOG1538|consen  217 ------KDRALNFDPCCISYFTNGEYILLGGSDKQLSLFT-RDGVRLGTVGEQDSWIWTVQAKPNSQYVVVGCQD  284 (1081)
T ss_pred             ------ccccCCCCchhheeccCCcEEEEccCCCceEEEe-ecCeEEeeccccceeEEEEEEccCCceEEEEEcc
Confidence                  1112233456889999999999999999999997 5788888887 78899999999999999988753

>PRK11028 6-phosphogluconolactonase; Provisional

Probab=99.91  E-value=1.7e-20  Score=153.81  Aligned_cols=290  Identities=11%  Similarity=0.109  Sum_probs=184.7

Q ss_pred             ecCCCCeEEEEecCC-ce--EEEEEecCCCCcceEEEEeCCceEEEEE-cCCCeEEEEeCCC-ccccee-cccCCcceEE
Q psy10867         10 SYDGSGAISVWEPKG-GT--LLMSYKGASVLSPHSMCLLGNDYVLGVE-KGKPMIQAWPVNS-QEKAQL-RLICPGRISS   83 (343)
Q Consensus        10 s~~~dg~i~iwd~~~-~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~~~~i~iw~~~~-~~~~~~-~~~~~~~v~~   83 (343)
                      +...++.|++||+.+ ++  .+.++... . .+..++++|++++++++ ..++.|.+|+++. ++.... .....+....
T Consensus         7 ~~~~~~~I~~~~~~~~g~l~~~~~~~~~-~-~~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g~l~~~~~~~~~~~p~~   84 (330)
T PRK11028          7 ASPESQQIHVWNLNHEGALTLLQVVDVP-G-QVQPMVISPDKRHLYVGVRPEFRVLSYRIADDGALTFAAESPLPGSPTH   84 (330)
T ss_pred             EcCCCCCEEEEEECCCCceeeeeEEecC-C-CCccEEECCCCCEEEEEECCCCcEEEEEECCCCceEEeeeecCCCCceE
Confidence            335589999999964 43  45556543 3 67889999999776544 5568899999863 332111 1123345678


Q ss_pred             EEECCCCCEEEEe--cCCeEEEEEccC-C---ceEEEecccCCCeEEEEEecCCCEEEEec-CCCeEEEeecCccceeee
Q psy10867         84 MQASPDAAYIAVS--IETKLHMWQISS-G---RLLATASSHYQPITIVKWSADSNFIVTGG-EDGTICVWQLSRLICKQT  156 (343)
Q Consensus        84 ~~~s~~~~~l~~~--~d~~i~v~~~~~-~---~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~  156 (343)
                      ++|+|++++|+++  .++.|.+|++++ +   +.+..+.+ .....+++++|+++++++++ .++.|.+||+.+......
T Consensus        85 i~~~~~g~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~-~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g~l~~  163 (330)
T PRK11028         85 ISTDHQGRFLFSASYNANCVSVSPLDKDGIPVAPIQIIEG-LEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSDDGHLVA  163 (330)
T ss_pred             EEECCCCCEEEEEEcCCCeEEEEEECCCCCCCCceeeccC-CCcccEeEeCCCCCEEEEeeCCCCEEEEEEECCCCcccc
Confidence            9999999988864  478999999964 3   22333322 23467789999999886554 569999999976321110


Q ss_pred             eecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeC-CCeEEEEecCC--Cc--eEEEee-cC----
Q psy10867        157 VAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSH-DRTCKIFDLCT--GE--DLLSLI-LD----  226 (343)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~-d~~i~~wd~~~--~~--~~~~~~-~~----  226 (343)
                      ..              ..... . ........+.|+|++  ++++++.. ++.|.+||++.  ++  .+..+. .+    
T Consensus       164 ~~--------------~~~~~-~-~~g~~p~~~~~~pdg--~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~  225 (330)
T PRK11028        164 QE--------------PAEVT-T-VEGAGPRHMVFHPNQ--QYAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPADFS  225 (330)
T ss_pred             cC--------------CCcee-c-CCCCCCceEEECCCC--CEEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCcCC
Confidence            00              00001 1 112346689999999  67766665 89999999973  32  233322 11    


Q ss_pred             --CcEEEEEEcCCCCEEEEEcC-CCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeC-CCc
Q psy10867        227 --TRLTCVAFDGTEDNIYMGTS-EGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSA-DET  302 (343)
Q Consensus       227 --~~i~~~~~~~~~~~l~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~-dg~  302 (343)
                        .....+.++|++++++++.. ++.|.+|++.........       +..... ......+.++|+|++|+++.. +++
T Consensus       226 ~~~~~~~i~~~pdg~~lyv~~~~~~~I~v~~i~~~~~~~~~-------~~~~~~-~~~p~~~~~~~dg~~l~va~~~~~~  297 (330)
T PRK11028        226 DTRWAADIHITPDGRHLYACDRTASLISVFSVSEDGSVLSF-------EGHQPT-ETQPRGFNIDHSGKYLIAAGQKSHH  297 (330)
T ss_pred             CCccceeEEECCCCCEEEEecCCCCeEEEEEEeCCCCeEEE-------eEEEec-cccCCceEECCCCCEEEEEEccCCc
Confidence              12346889999999999854 789999999754321111       111111 124557899999999987765 899


Q ss_pred             EEEEecc--cce--eeeecccCCceEEEEE
Q psy10867        303 LKIWHTI--SRQ--CLRTIQHKGPVLGAFL  328 (343)
Q Consensus       303 i~iwd~~--~~~--~~~~~~~~~~v~~~~~  328 (343)
                      |.+|++.  ++.  .+..+.......+++|
T Consensus       298 v~v~~~~~~~g~l~~~~~~~~g~~P~~~~~  327 (330)
T PRK11028        298 ISVYEIDGETGLLTELGRYAVGQGPMWVSV  327 (330)
T ss_pred             EEEEEEcCCCCcEEEccccccCCCceEEEE
Confidence            9999874  343  3344444444555555

>KOG0290|consensus

Probab=99.91  E-value=9e-22  Score=145.69  Aligned_cols=280  Identities=18%  Similarity=0.203  Sum_probs=202.5

Q ss_pred             ceEEEEEecCCCCcceEEEEe--CC-ceEEEEEcC----CCeEEEEeCC--Ccccc-eecccCCcceEEEEECCCCC---
Q psy10867         25 GTLLMSYKGASVLSPHSMCLL--GN-DYVLGVEKG----KPMIQAWPVN--SQEKA-QLRLICPGRISSMQASPDAA---   91 (343)
Q Consensus        25 ~~~~~~~~~~~~~~v~~~~~~--~~-~~~~~~~~~----~~~i~iw~~~--~~~~~-~~~~~~~~~v~~~~~s~~~~---   91 (343)
                      ++.+..+..+-  .+.++.|+  |+ +..+|.|+-    .+.|.|-.+.  +++.+ .....|.-+++.+.|.|+..   
T Consensus        35 ~~eiy~Y~ap~--~lya~~Ws~~~~~~~rla~gS~~Ee~~Nkvqiv~ld~~s~e~~~~a~fd~~YP~tK~~wiPd~~g~~  112 (364)
T KOG0290|consen   35 RKEIYTYNAPW--PLYAMNWSVRPDKKFRLAVGSFIEEYNNKVQIVQLDEDSGELVEDANFDHPYPVTKLMWIPDSKGVY  112 (364)
T ss_pred             cceEEEecCCC--ceeeeccccCCCcceeEEEeeeccccCCeeEEEEEccCCCceeccCCCCCCCCccceEecCCccccC
Confidence            34455566554  78899998  33 355555542    2567766543  44443 22247899999999999763   


Q ss_pred             --EEEEecCCeEEEEEccCCce----EEEe-----cccCCCeEEEEEec-CCCEEEEecCCCeEEEeecCccceeeeeec
Q psy10867         92 --YIAVSIETKLHMWQISSGRL----LATA-----SSHYQPITIVKWSA-DSNFIVTGGEDGTICVWQLSRLICKQTVAF  159 (343)
Q Consensus        92 --~l~~~~d~~i~v~~~~~~~~----~~~~-----~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~  159 (343)
                        +||++ +..+++|.+...+.    ...+     ..+..++++..|+. +.+++.+++-|-+..|||++++...     
T Consensus       113 pdlLATs-~D~LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~~~~-----  186 (364)
T KOG0290|consen  113 PDLLATS-SDFLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGVSG-----  186 (364)
T ss_pred             cchhhcc-cCeEEEEeccCcCCceehhhhhccCcccccCCcccccccccCCcceeEeecccCeEEEEEEeecccc-----
Confidence              45554 56799999874221    1111     24567899999987 7789999999999999999986220     


Q ss_pred             CCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee---c-CCcEEEEEEc
Q psy10867        160 GIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI---L-DTRLTCVAFD  235 (343)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~---~-~~~i~~~~~~  235 (343)
                                    .....+-.|..+|..++|...+. +.+++.+.||.+|+||++..+.-..+.   . ..+...++|+
T Consensus       187 --------------~vkTQLIAHDKEV~DIaf~~~s~-~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlRLswn  251 (364)
T KOG0290|consen  187 --------------TVKTQLIAHDKEVYDIAFLKGSR-DVFASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWN  251 (364)
T ss_pred             --------------ceeeEEEecCcceeEEEeccCcc-ceEEEecCCCcEEEEEecccccceEEecCCCCCCcceeeccC
Confidence                          13345668999999999999765 799999999999999999876544333   2 4568889999


Q ss_pred             CCC-CEEEEE-cCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCC-CEEEEEeCCCcEEEEecccce
Q psy10867        236 GTE-DNIYMG-TSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITG-ITLLSSSADETLKIWHTISRQ  312 (343)
Q Consensus       236 ~~~-~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~s~~~dg~i~iwd~~~~~  312 (343)
                      ++. +++++- -....|.|.|++...          .++..+++|.+.|+.++|.|.. ..|.+++.|..+.+||+..--
T Consensus       252 kqDpnymATf~~dS~~V~iLDiR~P~----------tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q~~  321 (364)
T KOG0290|consen  252 KQDPNYMATFAMDSNKVVILDIRVPC----------TPVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQMP  321 (364)
T ss_pred             cCCchHHhhhhcCCceEEEEEecCCC----------cceehhhcCcccccceEecCCCCceeeecCCcceEEEEeccccc
Confidence            865 566664 445689999999754          3377899999999999999964 589999999999999987431


Q ss_pred             ------eeeecccCCceEEEEEccCC-Ceeee
Q psy10867        313 ------CLRTIQHKGPVLGAFLGLLP-PAIHD  337 (343)
Q Consensus       313 ------~~~~~~~~~~v~~~~~sp~~-~~l~~  337 (343)
                            ++..+...++|+.+.|+|.. .+|+.
T Consensus       322 ~~~~~dPilay~a~~EVNqi~Ws~~~~Dwiai  353 (364)
T KOG0290|consen  322 RENGEDPILAYTAGGEVNQIQWSSSQPDWIAI  353 (364)
T ss_pred             ccCCCCchhhhhccceeeeeeecccCCCEEEE
Confidence                  22333467899999999654 44443

>KOG0322|consensus

Probab=99.91  E-value=8.5e-23  Score=149.00  Aligned_cols=255  Identities=14%  Similarity=0.187  Sum_probs=191.0

Q ss_pred             EEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecc-cCCcceEEEEECCCCCEEEEecCCeEEEEE
Q psy10867         27 LLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRL-ICPGRISSMQASPDAAYIAVSIETKLHMWQ  105 (343)
Q Consensus        27 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~  105 (343)
                      +...++.|.. .|+++.|..+++++..... |.+++|++++.+....+. .+...|+.+.--|++.++.-+.|..+.+|+
T Consensus         6 P~fvLRp~~~-~v~s~~fqa~~rL~sg~~~-G~V~~w~lqt~r~~~~~r~~g~~~it~lq~~p~d~l~tqgRd~~L~lw~   83 (323)
T KOG0322|consen    6 PFFVLRPHSS-SVTSVLFQANERLMSGLSV-GIVKMWVLQTERDLPLIRLFGRLFITNLQSIPNDSLDTQGRDPLLILWT   83 (323)
T ss_pred             CeeEeccccc-hheehhhccchhhhccccc-ceEEEEEeecCccchhhhhhccceeeceeecCCcchhhcCCCceEEEEE
Confidence            4556778888 9999999999886655555 999999999988776665 677889999999987666669999999999


Q ss_pred             ccCCceEE--------------Ee---------------------------------------cccCCCeEEEEEec-CC
Q psy10867        106 ISSGRLLA--------------TA---------------------------------------SSHYQPITIVKWSA-DS  131 (343)
Q Consensus       106 ~~~~~~~~--------------~~---------------------------------------~~~~~~v~~~~~~~-~~  131 (343)
                      +.-+..+.              .+                                       .+..+.+.|..+.. ++
T Consensus        84 ia~s~~i~i~Si~~nslgFCrfSl~~~~k~~eqll~yp~rgsde~h~~D~g~~tqv~i~dd~~~~Klgsvmc~~~~~~c~  163 (323)
T KOG0322|consen   84 IAYSAFISIHSIVVNSLGFCRFSLVKKPKNSEQLLEYPSRGSDETHKQDGGDTTQVQIADDSERSKLGSVMCQDKDHACG  163 (323)
T ss_pred             ccCcceEEEeeeeccccccccceeccCCCcchhheecCCcccchhhhhccCccceeEccCchhccccCceeeeecccccc
Confidence            86421110              00                                       01123344444322 22


Q ss_pred             C--EEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeE
Q psy10867        132 N--FIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTC  209 (343)
Q Consensus       132 ~--~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i  209 (343)
                      .  +++.|-++|.+.+||+.++...-.+.            ...+.......|..+|.++.+.+.-  ..=++|+.+..+
T Consensus       164 s~~lllaGyEsghvv~wd~S~~~~~~~~~------------~~~kv~~~~ash~qpvlsldyas~~--~rGisgga~dkl  229 (323)
T KOG0322|consen  164 STFLLLAGYESGHVVIWDLSTGDKIIQLP------------QSSKVESPNASHKQPVLSLDYASSC--DRGISGGADDKL  229 (323)
T ss_pred             ceEEEEEeccCCeEEEEEccCCceeeccc------------cccccccchhhccCcceeeeechhh--cCCcCCCccccc
Confidence            2  56778899999999999874333221            1123445556799999999998766  556788888899


Q ss_pred             EEEecCCC--ce--EEEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEE
Q psy10867        210 KIFDLCTG--ED--LLSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTS  284 (343)
Q Consensus       210 ~~wd~~~~--~~--~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  284 (343)
                      ..|.+...  ..  ..+.. .+..+..+.+-||++.+++++.|++|++|..++...           +..+.-|...|++
T Consensus       230 ~~~Sl~~s~gslq~~~e~~lknpGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~p-----------LAVLkyHsagvn~  298 (323)
T KOG0322|consen  230 VMYSLNHSTGSLQIRKEITLKNPGVSGVRIRPDGKILATAGWDHRIRVYSWRTLNP-----------LAVLKYHSAGVNA  298 (323)
T ss_pred             eeeeeccccCcccccceEEecCCCccceEEccCCcEEeecccCCcEEEEEeccCCc-----------hhhhhhhhcceeE
Confidence            99987643  22  12222 345688899999999999999999999999998544           6677889999999


Q ss_pred             EEEccCCCEEEEEeCCCcEEEEec
Q psy10867        285 LSCSITGITLLSSSADETLKIWHT  308 (343)
Q Consensus       285 ~~~s~~~~~l~s~~~dg~i~iwd~  308 (343)
                      ++|+|+..++|+++.|+.|-+|++
T Consensus       299 vAfspd~~lmAaaskD~rISLWkL  322 (323)
T KOG0322|consen  299 VAFSPDCELMAAASKDARISLWKL  322 (323)
T ss_pred             EEeCCCCchhhhccCCceEEeeec
Confidence            999999999999999999999986

>COG2319 FOG: WD40 repeat [General function prediction only]

Probab=99.91  E-value=4.6e-20  Score=157.55  Aligned_cols=291  Identities=26%  Similarity=0.404  Sum_probs=220.4

Q ss_pred             EEEecCCCCeEEEEecCCce-EEEEEecCCCCcceEEEE-eCCce-EEEE-EcCCCeEEEEeCCC-cccceecccCCcce
Q psy10867          7 VAFSYDGSGAISVWEPKGGT-LLMSYKGASVLSPHSMCL-LGNDY-VLGV-EKGKPMIQAWPVNS-QEKAQLRLICPGRI   81 (343)
Q Consensus         7 ~~~s~~~dg~i~iwd~~~~~-~~~~~~~~~~~~v~~~~~-~~~~~-~~~~-~~~~~~i~iw~~~~-~~~~~~~~~~~~~v   81 (343)
                      .....+.++.+.+|+...+. .+..+.......+..+.+ ++++. +++. +..++.+.+|+... .........|...|
T Consensus        79 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v  158 (466)
T COG2319          79 LLLSGSSDGTIKLWDLDNGEKLIKSLEGLHDSSVSKLALSSPDGNSILLASSSLDGTVKLWDLSTPGKLIRTLEGHSESV  158 (466)
T ss_pred             EEEEecCCCcEEEEEcCCCceeEEEEeccCCCceeeEEEECCCcceEEeccCCCCccEEEEEecCCCeEEEEEecCcccE
Confidence            34455568999999998876 677777633225666666 77776 5555 44379999999998 66667777999999


Q ss_pred             EEEEECCCCCEEEEe-c-CCeEEEEEccCCceEEEecccCCCeEEEEEecCCC-EEEEecCCCeEEEeecCccceeeeee
Q psy10867         82 SSMQASPDAAYIAVS-I-ETKLHMWQISSGRLLATASSHYQPITIVKWSADSN-FIVTGGEDGTICVWQLSRLICKQTVA  158 (343)
Q Consensus        82 ~~~~~s~~~~~l~~~-~-d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~  158 (343)
                      ..++|+|++..++.+ . ++.+++|++..+..+..+.+|...|.+++|+|++. .+++++.|+.|++||...+.      
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~wd~~~~~------  232 (466)
T COG2319         159 TSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGK------  232 (466)
T ss_pred             EEEEECCCCCEEEecCCCCCceEEEEcCCCceEEeeccCCCceEEEEEcCCcceEEEEecCCCcEEEEECCCCc------
Confidence            999999999877764 3 89999999999888999999999999999999988 55555999999999877442      


Q ss_pred             cCCCCCCCCccccccceee-eecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCce-EEEe-ecCCcEEEEEEc
Q psy10867        159 FGIPGSSGKGVTGLTEPLH-VKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGED-LLSL-ILDTRLTCVAFD  235 (343)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~-~~~~-~~~~~i~~~~~~  235 (343)
                                      ... .+..|.... ...|+|++  .++++++.|+.+++|+.+.... ...+ .+...+.++.|.
T Consensus       233 ----------------~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  293 (466)
T COG2319         233 ----------------LLRSTLSGHSDSV-VSSFSPDG--SLLASGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAFS  293 (466)
T ss_pred             ----------------EEeeecCCCCcce-eEeECCCC--CEEEEecCCCcEEEeeecCCCcEEEEEecCCccEEEEEEC
Confidence                            222 456677765 44899998  7888999999999999987665 3333 357889999999


Q ss_pred             CCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEE-eCCCcEEEEecccceee
Q psy10867        236 GTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSS-SADETLKIWHTISRQCL  314 (343)
Q Consensus       236 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~-~~dg~i~iwd~~~~~~~  314 (343)
                      |++..+++++.|+.+.+||..........         ....|...+..+.|.+++..++.+ ..|+.+++|++......
T Consensus       294 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~  364 (466)
T COG2319         294 PDGKLLASGSSDGTVRLWDLETGKLLSSL---------TLKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTGKPL  364 (466)
T ss_pred             CCCCEEEEeeCCCcEEEEEcCCCceEEEe---------eecccCCceEEEEECCCCCEEEEeecCCCcEEeeecCCCcee
Confidence            99888888888988999987765433221         023567778999994332455555 68899999999887733


Q ss_pred             eecccCCceEEEEEccCC
Q psy10867        315 RTIQHKGPVLGAFLGLLP  332 (343)
Q Consensus       315 ~~~~~~~~v~~~~~sp~~  332 (343)
                      ........+..+.+++ .
T Consensus       365 ~~~~~~~~~~~~~~~~-~  381 (466)
T COG2319         365 KTLEGHSNVLSVSFSP-D  381 (466)
T ss_pred             EEecCCceEEEEEECC-C
Confidence            3333333388889988 5

>KOG0307|consensus

Probab=99.91  E-value=1.2e-23  Score=181.76  Aligned_cols=263  Identities=11%  Similarity=0.145  Sum_probs=198.5

Q ss_pred             CCeEEEEecC--Cce----EEEEEecCCCCcceEEEEeCCce----EEEEEcCCCeEEEEeCCCc------ccceecccC
Q psy10867         14 SGAISVWEPK--GGT----LLMSYKGASVLSPHSMCLLGNDY----VLGVEKGKPMIQAWPVNSQ------EKAQLRLIC   77 (343)
Q Consensus        14 dg~i~iwd~~--~~~----~~~~~~~~~~~~v~~~~~~~~~~----~~~~~~~~~~i~iw~~~~~------~~~~~~~~~   77 (343)
                      +.++.||.+.  +.+    .+..+....  ..+.++|.+.+.    ++++|.+||.|.+||...-      ..+.....|
T Consensus        38 ~~slEifeld~~~~~~dlk~~~s~~s~~--rF~kL~W~~~g~~~~GlIaGG~edG~I~ly~p~~~~~~~~~~~la~~~~h  115 (1049)
T KOG0307|consen   38 SASLEIFELDFSDESSDLKPVGSLQSSN--RFNKLAWGSYGSHSHGLIAGGLEDGNIVLYDPASIIANASEEVLATKSKH  115 (1049)
T ss_pred             ccccceeeecccCccccccccccccccc--cceeeeecccCCCccceeeccccCCceEEecchhhccCcchHHHhhhccc
Confidence            4455555443  322    333444333  678999998653    5999999999999997652      223556689


Q ss_pred             CcceEEEEECCCCC-EEEE-ecCCeEEEEEccCCceEEEec--ccCCCeEEEEEec-CCCEEEEecCCCeEEEeecCccc
Q psy10867         78 PGRISSMQASPDAA-YIAV-SIETKLHMWQISSGRLLATAS--SHYQPITIVKWSA-DSNFIVTGGEDGTICVWQLSRLI  152 (343)
Q Consensus        78 ~~~v~~~~~s~~~~-~l~~-~~d~~i~v~~~~~~~~~~~~~--~~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~  152 (343)
                      .+.|..+.|++... +||+ +.||.|.|||++.-+.-..+.  ...+.|.+++|+. ..+.|++++.+|.+.|||++..+
T Consensus       116 ~G~V~gLDfN~~q~nlLASGa~~geI~iWDlnn~~tP~~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~  195 (1049)
T KOG0307|consen  116 TGPVLGLDFNPFQGNLLASGADDGEILIWDLNKPETPFTPGSQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKK  195 (1049)
T ss_pred             CCceeeeeccccCCceeeccCCCCcEEEeccCCcCCCCCCCCCCCcccceEeccchhhhHHhhccCCCCCceeccccCCC
Confidence            99999999999654 8887 578999999998755444442  2457899999986 55688999999999999999864


Q ss_pred             eeeeeecCCCCCCCCccccccceeeeecccc--cceEEEEeecCCCceEEEEeeCC---CeEEEEecCCCc-eEEEee-c
Q psy10867        153 CKQTVAFGIPGSSGKGVTGLTEPLHVKSQHS--LPVTHVTLSKLGAKSRVASVSHD---RTCKIFDLCTGE-DLLSLI-L  225 (343)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~l~~~~~d---~~i~~wd~~~~~-~~~~~~-~  225 (343)
                      .+-                      .+..+.  ..+..++|+|+.. ..+++++.|   -.|.+||+|... .++.+. |
T Consensus       196 pii----------------------~ls~~~~~~~~S~l~WhP~~a-Tql~~As~dd~~PviqlWDlR~assP~k~~~~H  252 (1049)
T KOG0307|consen  196 PII----------------------KLSDTPGRMHCSVLAWHPDHA-TQLLVASGDDSAPVIQLWDLRFASSPLKILEGH  252 (1049)
T ss_pred             ccc----------------------ccccCCCccceeeeeeCCCCc-eeeeeecCCCCCceeEeecccccCCchhhhccc
Confidence            332                      222232  4578999999987 566666665   358999998543 455554 7


Q ss_pred             CCcEEEEEEcCCC-CEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCC-EEEEEeCCCcE
Q psy10867        226 DTRLTCVAFDGTE-DNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGI-TLLSSSADETL  303 (343)
Q Consensus       226 ~~~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~s~~~dg~i  303 (343)
                      ...|.++.|++.+ .+|++++.|++|.+|+.++.+.           +..+....+++..+.|.|... .+++++.||.|
T Consensus       253 ~~GilslsWc~~D~~lllSsgkD~~ii~wN~~tgEv-----------l~~~p~~~nW~fdv~w~pr~P~~~A~asfdgkI  321 (1049)
T KOG0307|consen  253 QRGILSLSWCPQDPRLLLSSGKDNRIICWNPNTGEV-----------LGELPAQGNWCFDVQWCPRNPSVMAAASFDGKI  321 (1049)
T ss_pred             ccceeeeccCCCCchhhhcccCCCCeeEecCCCceE-----------eeecCCCCcceeeeeecCCCcchhhhheeccce
Confidence            8899999999977 7889999999999999998655           445666678999999999765 88899999999


Q ss_pred             EEEecccce
Q psy10867        304 KIWHTISRQ  312 (343)
Q Consensus       304 ~iwd~~~~~  312 (343)
                      -||.+..+.
T Consensus       322 ~I~sl~~~~  330 (1049)
T KOG0307|consen  322 SIYSLQGTD  330 (1049)
T ss_pred             eeeeeecCC
Confidence            999987653

>KOG1524|consensus

Probab=99.90  E-value=3.6e-22  Score=159.67  Aligned_cols=253  Identities=15%  Similarity=0.133  Sum_probs=185.5

Q ss_pred             CCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceE-EEEECC--------CCCEEEEecCCeEEEE
Q psy10867         34 ASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRIS-SMQASP--------DAAYIAVSIETKLHMW  104 (343)
Q Consensus        34 ~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~-~~~~s~--------~~~~l~~~~d~~i~v~  104 (343)
                      |.. .+.|+.|+.+..++.+++++..+.-|++.+.... ...-.++.+. .+..-+        ...+++++.||.+.+.
T Consensus        13 ~~e-~vc~v~w~~~eei~~~~dDh~~~~~~~~~~~s~~-~~~~p~df~pt~~h~~~rs~~~g~~~d~~~i~s~DGkf~il   90 (737)
T KOG1524|consen   13 NSE-KVCCVDWSSNEEIYFVSDDHQIFKWSDVSRDSVE-VAKLPDDFVPTDMHLGGRSSGGGKGSDTLLICSNDGRFVIL   90 (737)
T ss_pred             cce-eEEeecccccceEEEeccCceEEEeecccchhhh-hhhCCcccCCccccccccccCCCCCcceEEEEcCCceEEEe
Confidence            444 6778999998888888888544444455443322 2221122221 111111        1246667899999998


Q ss_pred             EccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeeccccc
Q psy10867        105 QISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSL  184 (343)
Q Consensus       105 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (343)
                      + +.++....+..|.+.+.+-.|+|||.-|+++++||.|++|.-...                       ....+.....
T Consensus        91 ~-k~~rVE~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWSrsGM-----------------------LRStl~Q~~~  146 (737)
T KOG1524|consen   91 N-KSARVERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWSRSGM-----------------------LRSTVVQNEE  146 (737)
T ss_pred             c-ccchhhhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEeccch-----------------------HHHHHhhcCc
Confidence            8 567777788899999999999999999999999999999987653                       3334455778


Q ss_pred             ceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeeccccccc
Q psy10867        185 PVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRD  263 (343)
Q Consensus       185 ~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~  263 (343)
                      +|+|++|.|+.+ +.+++.+  +.+.+=.+.....+..++ |++-|.++.|++..+.+++|+.|-+.++||...      
T Consensus       147 ~v~c~~W~p~S~-~vl~c~g--~h~~IKpL~~n~k~i~WkAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~~G------  217 (737)
T KOG1524|consen  147 SIRCARWAPNSN-SIVFCQG--GHISIKPLAANSKIIRWRAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDAQG------  217 (737)
T ss_pred             eeEEEEECCCCC-ceEEecC--CeEEEeecccccceeEEeccCcEEEEeecCccccceeecCCceeEEeecccC------
Confidence            999999999985 5565554  455555555444444444 888999999999999999999999999999764      


Q ss_pred             ccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc--cCCceEEEEEccCCCeeeecccC
Q psy10867        264 HHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ--HKGPVLGAFLGLLPPAIHDYDFT  341 (343)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~--~~~~v~~~~~sp~~~~l~~~~~~  341 (343)
                            ..+..-..|..+|++++|.|+ +.++.+|.+ ++|            |+  ..+.|..++|||||..++.++-.
T Consensus       218 ------~~Lf~S~~~ey~ITSva~npd-~~~~v~S~n-t~R------------~~~p~~GSifnlsWS~DGTQ~a~gt~~  277 (737)
T KOG1524|consen  218 ------ANLFTSAAEEYAITSVAFNPE-KDYLLWSYN-TAR------------FSSPRVGSIFNLSWSADGTQATCGTST  277 (737)
T ss_pred             ------cccccCChhccceeeeeeccc-cceeeeeee-eee------------ecCCCccceEEEEEcCCCceeeccccC
Confidence                  335566789999999999999 666666654 444            33  56789999999999999887643

>KOG0303|consensus

Probab=99.90  E-value=1.6e-21  Score=150.21  Aligned_cols=225  Identities=16%  Similarity=0.231  Sum_probs=174.1

Q ss_pred             ecccCCcceEEEEECC-CCCEEEE-ecCCeEEEEEccCC-------ceEEEecccCCCeEEEEEecC-CCEEEEecCCCe
Q psy10867         73 LRLICPGRISSMQASP-DAAYIAV-SIETKLHMWQISSG-------RLLATASSHYQPITIVKWSAD-SNFIVTGGEDGT  142 (343)
Q Consensus        73 ~~~~~~~~v~~~~~s~-~~~~l~~-~~d~~i~v~~~~~~-------~~~~~~~~~~~~v~~~~~~~~-~~~l~s~~~dg~  142 (343)
                      ...+|.++|..++|+| +...+|+ +.|.+|.||++..+       +++..+.+|...|--++|+|. .+.|++++.|.+
T Consensus        76 ~v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~  155 (472)
T KOG0303|consen   76 LVCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNT  155 (472)
T ss_pred             CccCccccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCce
Confidence            3458999999999999 5567776 57889999998765       456778899999999999994 568899999999


Q ss_pred             EEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEE
Q psy10867        143 ICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLS  222 (343)
Q Consensus       143 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~  222 (343)
                      |.+|++.++...                      ..+. |...|.++.|+.+|  .++++.+.|..|||||.++++.+..
T Consensus       156 v~iWnv~tgeal----------------------i~l~-hpd~i~S~sfn~dG--s~l~TtckDKkvRv~dpr~~~~v~e  210 (472)
T KOG0303|consen  156 VSIWNVGTGEAL----------------------ITLD-HPDMVYSMSFNRDG--SLLCTTCKDKKVRVIDPRRGTVVSE  210 (472)
T ss_pred             EEEEeccCCcee----------------------eecC-CCCeEEEEEeccCC--ceeeeecccceeEEEcCCCCcEeee
Confidence            999999998533                      2333 99999999999999  8999999999999999999999887


Q ss_pred             ee-c-CCcEEEEEEcCCCCEEEEEc---CCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEE-E
Q psy10867        223 LI-L-DTRLTCVAFDGTEDNIYMGT---SEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLL-S  296 (343)
Q Consensus       223 ~~-~-~~~i~~~~~~~~~~~l~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-s  296 (343)
                      -. | ...-..+.|-.++..+-+|.   .+.++-+||..+.+.+..        ...+. ..+.|.---|.+|.+.+. +
T Consensus       211 ~~~heG~k~~Raifl~~g~i~tTGfsr~seRq~aLwdp~nl~eP~~--------~~elD-tSnGvl~PFyD~dt~ivYl~  281 (472)
T KOG0303|consen  211 GVAHEGAKPARAIFLASGKIFTTGFSRMSERQIALWDPNNLEEPIA--------LQELD-TSNGVLLPFYDPDTSIVYLC  281 (472)
T ss_pred             cccccCCCcceeEEeccCceeeeccccccccceeccCcccccCcce--------eEEec-cCCceEEeeecCCCCEEEEE
Confidence            74 3 33466677888888555553   477899999887655422        22332 234565566788888776 5


Q ss_pred             EeCCCcEEEEecccce----eeeecccCCceEEEEEccC
Q psy10867        297 SSADETLKIWHTISRQ----CLRTIQHKGPVLGAFLGLL  331 (343)
Q Consensus       297 ~~~dg~i~iwd~~~~~----~~~~~~~~~~v~~~~~sp~  331 (343)
                      |-.|+.||.|.+.+..    .+.+|....+-..+.|-|.
T Consensus       282 GKGD~~IRYyEit~d~P~~hyln~f~S~epQRG~g~mPK  320 (472)
T KOG0303|consen  282 GKGDSSIRYFEITNEPPFVHYLNTFSSKEPQRGMGFMPK  320 (472)
T ss_pred             ecCCcceEEEEecCCCceeEEecccccCCcccccccccc
Confidence            6679999999997654    3445555666667777664

>PRK11028 6-phosphogluconolactonase; Provisional

Probab=99.90  E-value=3e-20  Score=152.29  Aligned_cols=264  Identities=12%  Similarity=0.145  Sum_probs=171.6

Q ss_pred             EEEEEcCCCeEEEEeCCC-cc--cceecccCCcceEEEEECCCCCEEEEe--cCCeEEEEEcc-CCce--EEEecccCCC
Q psy10867         50 VLGVEKGKPMIQAWPVNS-QE--KAQLRLICPGRISSMQASPDAAYIAVS--IETKLHMWQIS-SGRL--LATASSHYQP  121 (343)
Q Consensus        50 ~~~~~~~~~~i~iw~~~~-~~--~~~~~~~~~~~v~~~~~s~~~~~l~~~--~d~~i~v~~~~-~~~~--~~~~~~~~~~  121 (343)
                      +.++...++.|.+|++.+ ++  .++.. .+.+....++++|++++|+++  .++.|.+|+++ +++.  +.... ..+.
T Consensus         4 ~y~~~~~~~~I~~~~~~~~g~l~~~~~~-~~~~~~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g~l~~~~~~~-~~~~   81 (330)
T PRK11028          4 VYIASPESQQIHVWNLNHEGALTLLQVV-DVPGQVQPMVISPDKRHLYVGVRPEFRVLSYRIADDGALTFAAESP-LPGS   81 (330)
T ss_pred             EEEEcCCCCCEEEEEECCCCceeeeeEE-ecCCCCccEEECCCCCEEEEEECCCCcEEEEEECCCCceEEeeeec-CCCC
Confidence            344445569999999964 33  22333 334567889999999988753  46889999997 3432  22222 2345


Q ss_pred             eEEEEEecCCCEEEEecC-CCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEE
Q psy10867        122 ITIVKWSADSNFIVTGGE-DGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRV  200 (343)
Q Consensus       122 v~~~~~~~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l  200 (343)
                      ...++++|+++++++++. ++.|.+|++.+......                  ..... .+......++++|++  +++
T Consensus        82 p~~i~~~~~g~~l~v~~~~~~~v~v~~~~~~g~~~~------------------~~~~~-~~~~~~~~~~~~p~g--~~l  140 (330)
T PRK11028         82 PTHISTDHQGRFLFSASYNANCVSVSPLDKDGIPVA------------------PIQII-EGLEGCHSANIDPDN--RTL  140 (330)
T ss_pred             ceEEEECCCCCEEEEEEcCCCeEEEEEECCCCCCCC------------------ceeec-cCCCcccEeEeCCCC--CEE
Confidence            678999999998888764 88999999974321110                  11111 122346678899998  455


Q ss_pred             -EEeeCCCeEEEEecCCCceEE-------EeecCCcEEEEEEcCCCCEEEEEcC-CCcEEEEEeecccccccccccCCCC
Q psy10867        201 -ASVSHDRTCKIFDLCTGEDLL-------SLILDTRLTCVAFDGTEDNIYMGTS-EGVIKSFCLRQVPRTRDHHIQDSTS  271 (343)
Q Consensus       201 -~~~~~d~~i~~wd~~~~~~~~-------~~~~~~~i~~~~~~~~~~~l~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~  271 (343)
                       ++...++.|.+||+.+...+.       ..........++|+|++++++++.. ++.|.+|++.......+.. .   .
T Consensus       141 ~v~~~~~~~v~v~d~~~~g~l~~~~~~~~~~~~g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~~~~~-~---~  216 (330)
T PRK11028        141 WVPCLKEDRIRLFTLSDDGHLVAQEPAEVTTVEGAGPRHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGEIECV-Q---T  216 (330)
T ss_pred             EEeeCCCCEEEEEEECCCCcccccCCCceecCCCCCCceEEECCCCCEEEEEecCCCEEEEEEEeCCCCCEEEE-E---E
Confidence             556667999999997643221       1223455778999999999988876 8999999997421110000 0   0


Q ss_pred             CCccc---cccCcEEEEEEccCCCEEEEEeC-CCcEEEEecccce----eeeecccCCceEEEEEccCCCeeeeccc
Q psy10867        272 NPDFI---GHEKQVTSLSCSITGITLLSSSA-DETLKIWHTISRQ----CLRTIQHKGPVLGAFLGLLPPAIHDYDF  340 (343)
Q Consensus       272 ~~~~~---~~~~~v~~~~~s~~~~~l~s~~~-dg~i~iwd~~~~~----~~~~~~~~~~v~~~~~sp~~~~l~~~~~  340 (343)
                      +..+.   .+......+.++|++++++++.. ++.|.+|++....    .+..+........+.|+|+|++|++++.
T Consensus       217 ~~~~p~~~~~~~~~~~i~~~pdg~~lyv~~~~~~~I~v~~i~~~~~~~~~~~~~~~~~~p~~~~~~~dg~~l~va~~  293 (330)
T PRK11028        217 LDMMPADFSDTRWAADIHITPDGRHLYACDRTASLISVFSVSEDGSVLSFEGHQPTETQPRGFNIDHSGKYLIAAGQ  293 (330)
T ss_pred             EecCCCcCCCCccceeEEECCCCCEEEEecCCCCeEEEEEEeCCCCeEEEeEEEeccccCCceEECCCCCEEEEEEc
Confidence            00111   11223456889999999988754 7899999986432    2233322335678999999999998763

>KOG1963|consensus

Probab=99.90  E-value=2.6e-20  Score=157.24  Aligned_cols=305  Identities=13%  Similarity=0.124  Sum_probs=220.1

Q ss_pred             CCeEEEEecCCceEEEEEecCCCCcceEEEEeCCc---eEEEEEcCCCeEEEEeCCCcccceecccCCcce---------
Q psy10867         14 SGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGND---YVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRI---------   81 (343)
Q Consensus        14 dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v---------   81 (343)
                      ...|.||...+|+++..+++|.. ++..+.+.|..   .++.+.+.+|.|++||...+..++.+..+ .++         
T Consensus        36 ~~~V~VyS~~Tg~~i~~l~~~~a-~l~s~~~~~~~~~~~~~~~~sl~G~I~vwd~~~~~Llkt~~~~-~~v~~~~~~~~~  113 (792)
T KOG1963|consen   36 GNFVKVYSTATGECITSLEDHTA-PLTSVIVLPSSENANYLIVCSLDGTIRVWDWSDGELLKTFDNN-LPVHALVYKPAQ  113 (792)
T ss_pred             CCEEEEEecchHhhhhhcccccC-ccceeeecCCCccceEEEEEecCccEEEecCCCcEEEEEEecC-CceeEEEechhH
Confidence            46899999999999999999999 99999998754   45556677799999999877665443211 011         


Q ss_pred             --------------------------------------------------EEEEECCCCCEEEEecCCeEEEEEccCCce
Q psy10867         82 --------------------------------------------------SSMQASPDAAYIAVSIETKLHMWQISSGRL  111 (343)
Q Consensus        82 --------------------------------------------------~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~  111 (343)
                                                                        .++.+++.|.+.....+..+.+|...++..
T Consensus       114 a~~s~~~~~s~~~~~~~~~~s~~~~~q~~~~~~~t~~~~~~d~~~~~~~~~~I~~~~~ge~~~i~~~~~~~~~~v~~~~~  193 (792)
T KOG1963|consen  114 ADISANVYVSVEDYSILTTFSKKLSKQSSRFVLATFDSAKGDFLKEHQEPKSIVDNNSGEFKGIVHMCKIHIYFVPKHTK  193 (792)
T ss_pred             hCccceeEeecccceeeeecccccccceeeeEeeeccccchhhhhhhcCCccEEEcCCceEEEEEEeeeEEEEEecccce
Confidence                                                              223333333333334445566777665441


Q ss_pred             EEE----ecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceE
Q psy10867        112 LAT----ASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVT  187 (343)
Q Consensus       112 ~~~----~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  187 (343)
                      ...    -..|.-.+++.+++|+++++++|..||.|.+|.--....                  .......+.-|...|+
T Consensus       194 ~~~~~~~~~~Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~------------------~~~t~t~lHWH~~~V~  255 (792)
T KOG1963|consen  194 HTSSRDITVHHTFNITCVALSPNERYLAAGDSDGRILVWRDFGSSD------------------DSETCTLLHWHHDEVN  255 (792)
T ss_pred             eeccchhhhhhcccceeEEeccccceEEEeccCCcEEEEecccccc------------------ccccceEEEecccccc
Confidence            110    124666789999999999999999999999996433110                  0124456677999999


Q ss_pred             EEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeeccccccccccc
Q psy10867        188 HVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQ  267 (343)
Q Consensus       188 ~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~  267 (343)
                      +++|+++|  .+|++|+..+.+.+|.+.+++...--+..++|..+.++||+.+.++...|+.|.+.............-.
T Consensus       256 ~L~fS~~G--~~LlSGG~E~VLv~Wq~~T~~kqfLPRLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~~dl~~k~tIsgi  333 (792)
T KOG1963|consen  256 SLSFSSDG--AYLLSGGREGVLVLWQLETGKKQFLPRLGSPILHIVVSPDSDLYSLVLEDNQIHLIKASDLEIKSTISGI  333 (792)
T ss_pred             eeEEecCC--ceEeecccceEEEEEeecCCCcccccccCCeeEEEEEcCCCCeEEEEecCceEEEEeccchhhhhhccCc
Confidence            99999999  8999999999999999999995444458999999999999999999999999999988665443322110


Q ss_pred             CCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc------cC------CceEEEEEccCCCee
Q psy10867        268 DSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ------HK------GPVLGAFLGLLPPAI  335 (343)
Q Consensus       268 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~------~~------~~v~~~~~sp~~~~l  335 (343)
                      .......-....+-.+.++++|.-+.++-.+..|.|.+||+.+.+.+..+.      +.      -.+++++.+..|.++
T Consensus       334 ~~~~~~~k~~~~~l~t~~~idpr~~~~vln~~~g~vQ~ydl~td~~i~~~~v~~~n~~~~~~n~~v~itav~~~~~gs~m  413 (792)
T KOG1963|consen  334 KPPTPSTKTRPQSLTTGVSIDPRTNSLVLNGHPGHVQFYDLYTDSTIYKLQVCDENYSDGDVNIQVGITAVARSRFGSWM  413 (792)
T ss_pred             cCCCccccccccccceeEEEcCCCCceeecCCCceEEEEeccccceeeeEEEEeecccCCcceeEEeeeeehhhccceEE
Confidence            000000011224456788999977788889999999999998877666553      12      246788888889999


Q ss_pred             eeccc
Q psy10867        336 HDYDF  340 (343)
Q Consensus       336 ~~~~~  340 (343)
                      ++...
T Consensus       414 aT~E~  418 (792)
T KOG1963|consen  414 ATLEA  418 (792)
T ss_pred             EEeee
Confidence            88754

>KOG0303|consensus

Probab=99.89  E-value=1.3e-21  Score=150.61  Aligned_cols=223  Identities=17%  Similarity=0.281  Sum_probs=168.1

Q ss_pred             CCCEEEE---e-cCCeEEEEEcc-CCce---EEEecccCCCeEEEEEec-CCCEEEEecCCCeEEEeecCccceeeeeec
Q psy10867         89 DAAYIAV---S-IETKLHMWQIS-SGRL---LATASSHYQPITIVKWSA-DSNFIVTGGEDGTICVWQLSRLICKQTVAF  159 (343)
Q Consensus        89 ~~~~l~~---~-~d~~i~v~~~~-~~~~---~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~  159 (343)
                      +.+++|.   + ..|...+.-+. +|+.   .-.+.+|+++|..++|+| +.+.||+|++|.+|.||++........+  
T Consensus        43 NPkfiAvi~easgGgaf~ViPl~k~Gr~d~~~P~v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~l--  120 (472)
T KOG0303|consen   43 NPKFVAVIIEASGGGAFLVIPLVKTGRMDASYPLVCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDL--  120 (472)
T ss_pred             CCceEEEEEecCCCcceeecccccccccCCCCCCccCccccccccccCccCCceeecCCCCceEEEEECCCcccccCc--
Confidence            4566664   2 23344444432 3332   224568999999999999 7778999999999999999876544433  


Q ss_pred             CCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCCcEEEEEEcCCCC
Q psy10867        160 GIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTED  239 (343)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~  239 (343)
                                   .+++..+.+|...|.-++|+|... +.|++++.|.+|.+||+.+++.+.++.|+..|.++.|+.+|.
T Consensus       121 -------------tepvv~L~gH~rrVg~V~wHPtA~-NVLlsag~Dn~v~iWnv~tgeali~l~hpd~i~S~sfn~dGs  186 (472)
T KOG0303|consen  121 -------------TEPVVELYGHQRRVGLVQWHPTAP-NVLLSAGSDNTVSIWNVGTGEALITLDHPDMVYSMSFNRDGS  186 (472)
T ss_pred             -------------ccceEEEeecceeEEEEeecccch-hhHhhccCCceEEEEeccCCceeeecCCCCeEEEEEeccCCc
Confidence                         268899999999999999999876 899999999999999999999999999999999999999999


Q ss_pred             EEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCc-EEEEEEccCCCEEEEE---eCCCcEEEEeccccee--
Q psy10867        240 NIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQ-VTSLSCSITGITLLSS---SADETLKIWHTISRQC--  313 (343)
Q Consensus       240 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~s~~~~~l~s~---~~dg~i~iwd~~~~~~--  313 (343)
                      +|++.+.|.+|+|||.+......           .-.+|.+. -..+.|-.++.++-+|   ..+..+-+||..+.+.  
T Consensus       187 ~l~TtckDKkvRv~dpr~~~~v~-----------e~~~heG~k~~Raifl~~g~i~tTGfsr~seRq~aLwdp~nl~eP~  255 (472)
T KOG0303|consen  187 LLCTTCKDKKVRVIDPRRGTVVS-----------EGVAHEGAKPARAIFLASGKIFTTGFSRMSERQIALWDPNNLEEPI  255 (472)
T ss_pred             eeeeecccceeEEEcCCCCcEee-----------ecccccCCCcceeEEeccCceeeeccccccccceeccCcccccCcc
Confidence            99999999999999999866533           23445442 3445677788844444   2467899998765432  


Q ss_pred             -eeecccCCceEEEEEccCCCeeeec
Q psy10867        314 -LRTIQHKGPVLGAFLGLLPPAIHDY  338 (343)
Q Consensus       314 -~~~~~~~~~v~~~~~sp~~~~l~~~  338 (343)
                       +.++...+.|.---|.||...++.+
T Consensus       256 ~~~elDtSnGvl~PFyD~dt~ivYl~  281 (472)
T KOG0303|consen  256 ALQELDTSNGVLLPFYDPDTSIVYLC  281 (472)
T ss_pred             eeEEeccCCceEEeeecCCCCEEEEE
Confidence             3344455666666677776666544

>KOG0644|consensus

Probab=99.89  E-value=5.6e-23  Score=172.19  Aligned_cols=271  Identities=14%  Similarity=0.186  Sum_probs=209.0

Q ss_pred             EEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-ecCCeEEEEEc
Q psy10867         28 LMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQI  106 (343)
Q Consensus        28 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~  106 (343)
                      ++.+.+|.+ +|.|+.|...|+++.+|++|..++||..++..+.....+|.+.|+.++.+.+..++++ +.|..|++|.+
T Consensus       183 ikrLlgH~n-aVyca~fDrtg~~Iitgsdd~lvKiwS~et~~~lAs~rGhs~ditdlavs~~n~~iaaaS~D~vIrvWrl  261 (1113)
T KOG0644|consen  183 IKRLLGHRN-AVYCAIFDRTGRYIITGSDDRLVKIWSMETARCLASCRGHSGDITDLAVSSNNTMIAAASNDKVIRVWRL  261 (1113)
T ss_pred             HHHHHhhhh-heeeeeeccccceEeecCccceeeeeeccchhhhccCCCCccccchhccchhhhhhhhcccCceEEEEec
Confidence            344678888 9999999999999999999999999999999999999999999999999988888886 78899999999


Q ss_pred             cCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccce
Q psy10867        107 SSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPV  186 (343)
Q Consensus       107 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  186 (343)
                      .++.++..+.+|++.|++++|+|-.    +.+.||++++||.+-.. ....                 +.-.......-+
T Consensus       262 ~~~~pvsvLrghtgavtaiafsP~~----sss~dgt~~~wd~r~~~-~~y~-----------------prp~~~~~~~~~  319 (1113)
T KOG0644|consen  262 PDGAPVSVLRGHTGAVTAIAFSPRA----SSSDDGTCRIWDARLEP-RIYV-----------------PRPLKFTEKDLV  319 (1113)
T ss_pred             CCCchHHHHhccccceeeeccCccc----cCCCCCceEeccccccc-cccC-----------------CCCCCcccccce
Confidence            9999999999999999999999954    77899999999998211 1000                 000001122456


Q ss_pred             EEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCCcEEEEEEcCC-CCEEEEEcCCCcEEEEEeeccccccccc
Q psy10867        187 THVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGT-EDNIYMGTSEGVIKSFCLRQVPRTRDHH  265 (343)
Q Consensus       187 ~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~d~~i~i~d~~~~~~~~~~~  265 (343)
                      .++.|..++  ..+++++.|+.-..|.+..-..     +...+.-+.++.+ ..+.+++-.+-.+.+|++..+..     
T Consensus       320 ~s~~~~~~~--~~f~Tgs~d~ea~n~e~~~l~~-----~~~~lif~t~ssd~~~~~~~ar~~~~~~vwnl~~g~l-----  387 (1113)
T KOG0644|consen  320 DSILFENNG--DRFLTGSRDGEARNHEFEQLAW-----RSNLLIFVTRSSDLSSIVVTARNDHRLCVWNLYTGQL-----  387 (1113)
T ss_pred             eeeeccccc--cccccccCCcccccchhhHhhh-----hccceEEEeccccccccceeeeeeeEeeeeecccchh-----
Confidence            677777777  7899999999988887643211     0111111111111 13555566677888999887544     


Q ss_pred             ccCCCCCCccccccCcEEEEEEccCCCE-EEEEeCCCcEEEEecccceeeeecc-cCCceEEEEEccCCCeeeecc
Q psy10867        266 IQDSTSNPDFIGHEKQVTSLSCSITGIT-LLSSSADETLKIWHTISRQCLRTIQ-HKGPVLGAFLGLLPPAIHDYD  339 (343)
Q Consensus       266 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~  339 (343)
                            ...+.+|...+..+.++|-+.. ..+++.||...|||+..|.+++... ..+.+...+||+||+.++...
T Consensus       388 ------~H~l~ghsd~~yvLd~Hpfn~ri~msag~dgst~iwdi~eg~pik~y~~gh~kl~d~kFSqdgts~~lsd  457 (1113)
T KOG0644|consen  388 ------LHNLMGHSDEVYVLDVHPFNPRIAMSAGYDGSTIIWDIWEGIPIKHYFIGHGKLVDGKFSQDGTSIALSD  457 (1113)
T ss_pred             ------hhhhcccccceeeeeecCCCcHhhhhccCCCceEeeecccCCcceeeecccceeeccccCCCCceEecCC
Confidence                  4557789999999999996654 4599999999999999998888776 667788889999998877654

>KOG0642|consensus

Probab=99.89  E-value=5.9e-22  Score=159.09  Aligned_cols=255  Identities=15%  Similarity=0.194  Sum_probs=189.9

Q ss_pred             EEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCc--------ccceecccCCcceEEEEECCCCCEEEE-ecCCe
Q psy10867         30 SYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQ--------EKAQLRLICPGRISSMQASPDAAYIAV-SIETK  100 (343)
Q Consensus        30 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~--------~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~  100 (343)
                      ++..|.+ .++.++|.|-...+++++.||.+.+|+++..        +.+..+.+|.++|.|++..++++.+.+ |.||+
T Consensus       289 tl~s~~d-~ir~l~~~~sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ysgg~Dg~  367 (577)
T KOG0642|consen  289 TLRSHDD-CIRALAFHPSEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYSGGIDGT  367 (577)
T ss_pred             eeecchh-hhhhhhcCCCCCeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceEEEeeccCce
Confidence            5667777 8999999998888888988899999999321        234667799999999999999998887 78999


Q ss_pred             EEEEEccCC----------ceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccc
Q psy10867        101 LHMWQISSG----------RLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVT  170 (343)
Q Consensus       101 i~v~~~~~~----------~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  170 (343)
                      |+.|++...          .....+.||.+.|+.+++++....|++++.||++++|+...... .++             
T Consensus       368 I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~~~~~~-~~f-------------  433 (577)
T KOG0642|consen  368 IRCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEPTEESP-CTF-------------  433 (577)
T ss_pred             eeeeccCCCCCcccccCcchhccceeccccceeeeeecccccceeeecCCceEEeeccCCcCc-ccc-------------
Confidence            999965421          23456789999999999999999999999999999999876533 111             


Q ss_pred             cccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeec--------CCcEEEEEEcCCCCEEE
Q psy10867        171 GLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLIL--------DTRLTCVAFDGTEDNIY  242 (343)
Q Consensus       171 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~--------~~~i~~~~~~~~~~~l~  242 (343)
                            .. ....+...++.+-.... ...++...-+.-.++++.....+..+..        ...+..+.++|.+...+
T Consensus       434 ------~~-~~e~g~Plsvd~~ss~~-a~~~~s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vVs~~~~~~~~  505 (577)
T KOG0642|consen  434 ------GE-PKEHGYPLSVDRTSSRP-AHSLASFRFGYTSIDDMEVVSDLLIFESSASPGPRRYPQINKVVSHPTADITF  505 (577)
T ss_pred             ------CC-ccccCCcceEeeccchh-HhhhhhcccccccchhhhhhhheeeccccCCCcccccCccceEEecCCCCeeE
Confidence                  00 11122233444433221 1222222233333444444444444331        13477889999999999


Q ss_pred             EEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc
Q psy10867        243 MGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ  318 (343)
Q Consensus       243 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~  318 (343)
                      ++..|+.|+++|..++..           +.....|...++++++.|+|.+|++++.||.+++|.+....++....
T Consensus       506 ~~hed~~Ir~~dn~~~~~-----------l~s~~a~~~svtslai~~ng~~l~s~s~d~sv~l~kld~k~~~~es~  570 (577)
T KOG0642|consen  506 TAHEDRSIRFFDNKTGKI-----------LHSMVAHKDSVTSLAIDPNGPYLMSGSHDGSVRLWKLDVKTCVLEST  570 (577)
T ss_pred             ecccCCceeccccccccc-----------chheeeccceecceeecCCCceEEeecCCceeehhhccchheeeccc
Confidence            999999999999887544           66678899999999999999999999999999999998776665544

>KOG1517|consensus

Probab=99.89  E-value=1.1e-20  Score=162.50  Aligned_cols=284  Identities=17%  Similarity=0.208  Sum_probs=202.4

Q ss_pred             ccceEEEecCCCCeEEEEecCCceEEEEEecCCC--CcceEEEEeC--CceEEEEEcCCCeEEEEeCC-Cc----cccee
Q psy10867          3 LLNEVAFSYDGSGAISVWEPKGGTLLMSYKGASV--LSPHSMCLLG--NDYVLGVEKGKPMIQAWPVN-SQ----EKAQL   73 (343)
Q Consensus         3 ~v~~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~--~~v~~~~~~~--~~~~~~~~~~~~~i~iw~~~-~~----~~~~~   73 (343)
                      +....++.+++.-.|+|||.+.++.+..|..+..  ..|+.+.+-.  |..++.+++.||.|+||+-- ++    +.+.-
T Consensus      1074 pf~p~i~~ad~r~~i~vwd~e~~~~l~~F~n~~~~~t~Vs~l~liNe~D~aLlLtas~dGvIRIwk~y~~~~~~~eLVTa 1153 (1387)
T KOG1517|consen 1074 PFEPQIAAADDRERIRVWDWEKGRLLNGFDNGAFPDTRVSDLELINEQDDALLLTASSDGVIRIWKDYADKWKKPELVTA 1153 (1387)
T ss_pred             CCCceeEEcCCcceEEEEecccCceeccccCCCCCCCccceeeeecccchhheeeeccCceEEEecccccccCCceeEEe
Confidence            4556778888888999999999999988876542  2788888875  34677777777999999632 22    11111


Q ss_pred             cc-------cCCcceEEEEECCC-CCEEEEecCCeEEEEEccCCceEEEecc-cCCCeEEEEEec-CCCEEEEecCCCeE
Q psy10867         74 RL-------ICPGRISSMQASPD-AAYIAVSIETKLHMWQISSGRLLATASS-HYQPITIVKWSA-DSNFIVTGGEDGTI  143 (343)
Q Consensus        74 ~~-------~~~~~v~~~~~s~~-~~~l~~~~d~~i~v~~~~~~~~~~~~~~-~~~~v~~~~~~~-~~~~l~s~~~dg~i  143 (343)
                      ..       +..+.=.-+.|... |.++++|.-..|+|||.........+.. ....|+++.-+. .|+.++.|-.||.|
T Consensus      1154 w~~Ls~~~~~~r~~~~v~dWqQ~~G~Ll~tGd~r~IRIWDa~~E~~~~diP~~s~t~vTaLS~~~~~gn~i~AGfaDGsv 1233 (1387)
T KOG1517|consen 1154 WSSLSDQLPGARGTGLVVDWQQQSGHLLVTGDVRSIRIWDAHKEQVVADIPYGSSTLVTALSADLVHGNIIAAGFADGSV 1233 (1387)
T ss_pred             eccccccCccCCCCCeeeehhhhCCeEEecCCeeEEEEEecccceeEeecccCCCccceeecccccCCceEEEeecCCce
Confidence            11       11111134566654 4555556678999999988777776653 344566665543 57899999999999


Q ss_pred             EEeecCccceeeeeecCCCCCCCCccccccceeeeecccccc--eEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEE
Q psy10867        144 CVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLP--VTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLL  221 (343)
Q Consensus       144 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~  221 (343)
                      ++||.+.....                   ..+...+.|...  |..+.+.+.|- ..|++|+.+|.|++||++......
T Consensus      1234 RvyD~R~a~~d-------------------s~v~~~R~h~~~~~Iv~~slq~~G~-~elvSgs~~G~I~~~DlR~~~~e~ 1293 (1387)
T KOG1517|consen 1234 RVYDRRMAPPD-------------------SLVCVYREHNDVEPIVHLSLQRQGL-GELVSGSQDGDIQLLDLRMSSKET 1293 (1387)
T ss_pred             EEeecccCCcc-------------------ccceeecccCCcccceeEEeecCCC-cceeeeccCCeEEEEecccCcccc
Confidence            99999875332                   256677788877  99999999875 369999999999999999742222


Q ss_pred             Ee------ecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEE
Q psy10867        222 SL------ILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLL  295 (343)
Q Consensus       222 ~~------~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~  295 (343)
                      .+      ...+..+++..+++...+|+|+. +.|+||++..........  .   -.-+....+.+.+++|+|..-++|
T Consensus      1294 ~~~iv~~~~yGs~lTal~VH~hapiiAsGs~-q~ikIy~~~G~~l~~~k~--n---~~F~~q~~gs~scL~FHP~~~llA 1367 (1387)
T KOG1517|consen 1294 FLTIVAHWEYGSALTALTVHEHAPIIASGSA-QLIKIYSLSGEQLNIIKY--N---PGFMGQRIGSVSCLAFHPHRLLLA 1367 (1387)
T ss_pred             cceeeeccccCccceeeeeccCCCeeeecCc-ceEEEEecChhhhccccc--C---cccccCcCCCcceeeecchhHhhh
Confidence            11      12445999999999999999998 999999998643221110  0   001112235679999999999999


Q ss_pred             EEeCCCcEEEEecccce
Q psy10867        296 SSSADETLKIWHTISRQ  312 (343)
Q Consensus       296 s~~~dg~i~iwd~~~~~  312 (343)
                      +|+.|..|.||..+..+
T Consensus      1368 aG~~Ds~V~iYs~~k~~ 1384 (1387)
T KOG1517|consen 1368 AGSADSTVSIYSCEKPR 1384 (1387)
T ss_pred             hccCCceEEEeecCCcC
Confidence            99999999999876543

>KOG0649|consensus

Probab=99.89  E-value=1.6e-19  Score=130.60  Aligned_cols=269  Identities=15%  Similarity=0.182  Sum_probs=190.9

Q ss_pred             cccceEEEecCCCCeEEEEecCC---------c-eEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCccc-
Q psy10867          2 SLLNEVAFSYDGSGAISVWEPKG---------G-TLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEK-   70 (343)
Q Consensus         2 ~~v~~~~~s~~~dg~i~iwd~~~---------~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~-   70 (343)
                      +|-..++|.++.+|.|.+..+.+         | ..+...++|++ ++..++|.  ..++.++.+ |.|+=|....... 
T Consensus        19 sp~~~~l~agn~~G~iav~sl~sl~s~sa~~~gk~~iv~eqahdg-piy~~~f~--d~~Lls~gd-G~V~gw~W~E~~es   94 (325)
T KOG0649|consen   19 SPSKQYLFAGNLFGDIAVLSLKSLDSGSAEPPGKLKIVPEQAHDG-PIYYLAFH--DDFLLSGGD-GLVYGWEWNEEEES   94 (325)
T ss_pred             CCcceEEEEecCCCeEEEEEehhhhccccCCCCCcceeeccccCC-Ceeeeeee--hhheeeccC-ceEEEeeehhhhhh
Confidence            56677889999999999998864         2 23555689999 99999998  345555555 8999887654322 


Q ss_pred             ---c---ee-ccc-----CCcceEEEEECCCC-CEEEEecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEe
Q psy10867         71 ---A---QL-RLI-----CPGRISSMQASPDA-AYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTG  137 (343)
Q Consensus        71 ---~---~~-~~~-----~~~~v~~~~~s~~~-~~l~~~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~  137 (343)
                         .   .. ...     .-..|+++...|.. .++.++.|+.++-||+++|+..+.+++|++.|.++.-......+++|
T Consensus        95 ~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~AgGD~~~y~~dlE~G~i~r~~rGHtDYvH~vv~R~~~~qilsG  174 (325)
T KOG0649|consen   95 LATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFAGGDGVIYQVDLEDGRIQREYRGHTDYVHSVVGRNANGQILSG  174 (325)
T ss_pred             ccchhhhhhcCccccCcccCCccceeEeccCCCcEEEecCCeEEEEEEecCCEEEEEEcCCcceeeeeeecccCcceeec
Confidence               1   00 111     12358899888754 56666899999999999999999999999999999986666789999


Q ss_pred             cCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeeccc-ccceEEEEeecCCCceEEEEeeCCCeEEEEecCC
Q psy10867        138 GEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQH-SLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCT  216 (343)
Q Consensus       138 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~  216 (343)
                      ++||++++||.++.+..+.+...             +....++.| ...|.+++.+.    ..+++|+ ...+.+|++++
T Consensus       175 ~EDGtvRvWd~kt~k~v~~ie~y-------------k~~~~lRp~~g~wigala~~e----dWlvCGg-Gp~lslwhLrs  236 (325)
T KOG0649|consen  175 AEDGTVRVWDTKTQKHVSMIEPY-------------KNPNLLRPDWGKWIGALAVNE----DWLVCGG-GPKLSLWHLRS  236 (325)
T ss_pred             CCCccEEEEeccccceeEEeccc-------------cChhhcCcccCceeEEEeccC----ceEEecC-CCceeEEeccC
Confidence            99999999999999888776411             111112222 34577777655    4677665 45799999999


Q ss_pred             CceEEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCC-CEEE
Q psy10867        217 GEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITG-ITLL  295 (343)
Q Consensus       217 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~  295 (343)
                      .++...+..+.++..+.|.  .+.+++++..+.|.-|.+...-..            ..+......++..|+... ++|-
T Consensus       237 se~t~vfpipa~v~~v~F~--~d~vl~~G~g~~v~~~~l~Gvl~a------------~ip~~s~~c~s~s~~~~p~k~~s  302 (325)
T KOG0649|consen  237 SESTCVFPIPARVHLVDFV--DDCVLIGGEGNHVQSYTLNGVLQA------------NIPVESTACYSASWQTSPIKFIS  302 (325)
T ss_pred             CCceEEEecccceeEeeee--cceEEEeccccceeeeeeccEEEE------------eccCCccceeeecccCCceEEEE
Confidence            9999999999999999997  457888888888988887652211            111122233444443322 3555


Q ss_pred             EEeCCCcEEEE
Q psy10867        296 SSSADETLKIW  306 (343)
Q Consensus       296 s~~~dg~i~iw  306 (343)
                      .++..+.+.|+
T Consensus       303 ~ag~s~~~~i~  313 (325)
T KOG0649|consen  303 IAGFSNKLHIL  313 (325)
T ss_pred             ecccceeeeee
Confidence            56666666665

>KOG1587|consensus

Probab=99.89  E-value=2.8e-20  Score=156.15  Aligned_cols=269  Identities=17%  Similarity=0.151  Sum_probs=195.0

Q ss_pred             CeEEEEecCCc-eEEEEEecCCCCcceEEEEeCC-ceEEEEEcCCCeEEEEeCCCcccc------eecccCCcceEEEEE
Q psy10867         15 GAISVWEPKGG-TLLMSYKGASVLSPHSMCLLGN-DYVLGVEKGKPMIQAWPVNSQEKA------QLRLICPGRISSMQA   86 (343)
Q Consensus        15 g~i~iwd~~~~-~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~i~iw~~~~~~~~------~~~~~~~~~v~~~~~   86 (343)
                      +.+.+|++... .+...+....  .|.+++|+|. ..++++|..+|.|.+||+..+...      .....|..++..+.|
T Consensus       222 ~~~~vW~~~~p~~Pe~~~~~~s--~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW  299 (555)
T KOG1587|consen  222 GVLLVWSLKNPNTPELVLESPS--EVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVW  299 (555)
T ss_pred             ceEEEEecCCCCCceEEEecCC--ceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEE
Confidence            47999999875 5555555544  8999999994 689999999999999999877652      223378899999999


Q ss_pred             CCCC---CEEEEecCCeEEEEEccCCce-E-----EEec------ccCCCeEEEEEec-CCCEEEEecCCCeEEEeecCc
Q psy10867         87 SPDA---AYIAVSIETKLHMWQISSGRL-L-----ATAS------SHYQPITIVKWSA-DSNFIVTGGEDGTICVWQLSR  150 (343)
Q Consensus        87 s~~~---~~l~~~~d~~i~v~~~~~~~~-~-----~~~~------~~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~  150 (343)
                      ..+.   +++.++.||.|..|+++.-.. .     ....      .....+++++|.+ +...++.|+++|.|.-=+...
T Consensus       300 ~~~~~~~~f~s~ssDG~i~~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r~g  379 (555)
T KOG1587|consen  300 LQNEHNTEFFSLSSDGSICSWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGCRKG  379 (555)
T ss_pred             eccCCCCceEEEecCCcEeeeeccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcEEEEEeccC
Confidence            7543   355568899999998764322 1     1111      1123678999988 667899999999987633332


Q ss_pred             cceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecC-CCceEEEee-cCCc
Q psy10867        151 LICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLC-TGEDLLSLI-LDTR  228 (343)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~-~~~~~~~~~-~~~~  228 (343)
                      ......              ...+.......|.++|+++.++|-+. ..+++++ |-++++|... ...++..+. ....
T Consensus       380 ~~~~~~--------------~~~~~~~~~~~h~g~v~~v~~nPF~~-k~fls~g-DW~vriWs~~~~~~Pl~~~~~~~~~  443 (555)
T KOG1587|consen  380 YTPAPE--------------VSYKGHSTFITHIGPVYAVSRNPFYP-KNFLSVG-DWTVRIWSEDVIASPLLSLDSSPDY  443 (555)
T ss_pred             Cccccc--------------ccccccccccccCcceEeeecCCCcc-ceeeeec-cceeEeccccCCCCcchhhhhccce
Confidence            211110              11124556667999999999999985 4455554 9999999877 555555555 4556


Q ss_pred             EEEEEEcCCCC-EEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEe
Q psy10867        229 LTCVAFDGTED-NIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWH  307 (343)
Q Consensus       229 i~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd  307 (343)
                      +++++|||... .++++..+|.+.+||+.....         .++.+..-+....+.+.|++.|+.|++|...|.+.+|+
T Consensus       444 v~~vaWSptrpavF~~~d~~G~l~iWDLl~~~~---------~Pv~s~~~~~~~l~~~~~s~~g~~lavGd~~G~~~~~~  514 (555)
T KOG1587|consen  444 VTDVAWSPTRPAVFATVDGDGNLDIWDLLQDDE---------EPVLSQKVCSPALTRVRWSPNGKLLAVGDANGTTHILK  514 (555)
T ss_pred             eeeeEEcCcCceEEEEEcCCCceehhhhhcccc---------CCcccccccccccceeecCCCCcEEEEecCCCcEEEEE
Confidence            99999999765 566677899999999986433         22334444466778888999999999999999999999


Q ss_pred             ccc
Q psy10867        308 TIS  310 (343)
Q Consensus       308 ~~~  310 (343)
                      +..
T Consensus       515 l~~  517 (555)
T KOG1587|consen  515 LSE  517 (555)
T ss_pred             cCc
Confidence            853

>KOG1523|consensus

Probab=99.88  E-value=2.1e-20  Score=140.30  Aligned_cols=240  Identities=18%  Similarity=0.140  Sum_probs=186.1

Q ss_pred             CCcceEEEEECCCCCEEEEe-cCCeEEEEEccCCc---eEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccc
Q psy10867         77 CPGRISSMQASPDAAYIAVS-IETKLHMWQISSGR---LLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLI  152 (343)
Q Consensus        77 ~~~~v~~~~~s~~~~~l~~~-~d~~i~v~~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~  152 (343)
                      ...+|+|.+|++|+..+|.+ ....|.||......   ...++..|...|++++|+|..+.|++++.|..-++|....+.
T Consensus         9 ~~~pitchAwn~drt~iAv~~~~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~~~~~   88 (361)
T KOG1523|consen    9 LLEPITCHAWNSDRTQIAVSPNNHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQPSGG   88 (361)
T ss_pred             ccCceeeeeecCCCceEEeccCCceEEEEEecCCCCceeceehhhhCcceeEEeecCCCCceeEccCCCCccccccCCCC
Confidence            45789999999999999986 55699999876654   677889999999999999999999999999999999985432


Q ss_pred             eeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEE-----eecCC
Q psy10867        153 CKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLS-----LILDT  227 (343)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~-----~~~~~  227 (343)
                                         .+++...+..+....+++.|+|.+  +.+++|+.-..|.+|-++....-..     ....+
T Consensus        89 -------------------~WkptlvLlRiNrAAt~V~WsP~e--nkFAVgSgar~isVcy~E~ENdWWVsKhikkPirS  147 (361)
T KOG1523|consen   89 -------------------TWKPTLVLLRINRAATCVKWSPKE--NKFAVGSGARLISVCYYEQENDWWVSKHIKKPIRS  147 (361)
T ss_pred             -------------------eeccceeEEEeccceeeEeecCcC--ceEEeccCccEEEEEEEecccceehhhhhCCcccc
Confidence                               234666777799999999999999  8999999999999998875544322     22567


Q ss_pred             cEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccc-------cccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCC
Q psy10867        228 RLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTR-------DHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSAD  300 (343)
Q Consensus       228 ~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~-------~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d  300 (343)
                      .|.++.|+|++-+|++|+.|+..++|...-.....       ...++-+..+.++....+.+..+.|+|+|..|+-.+.|
T Consensus       148 tv~sldWhpnnVLlaaGs~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwvh~v~fs~sG~~lawv~Hd  227 (361)
T KOG1523|consen  148 TVTSLDWHPNNVLLAAGSTDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWVHGVLFSPSGNRLAWVGHD  227 (361)
T ss_pred             ceeeeeccCCcceecccccCcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhccCCCceeeeEeCCCCCEeeEecCC
Confidence            79999999999999999999999999764322111       11112222334444566889999999999999999999


Q ss_pred             CcEEEEecccce-eeeecc-cCCceEEEEEccCCCeeee
Q psy10867        301 ETLKIWHTISRQ-CLRTIQ-HKGPVLGAFLGLLPPAIHD  337 (343)
Q Consensus       301 g~i~iwd~~~~~-~~~~~~-~~~~v~~~~~sp~~~~l~~  337 (343)
                      ..+.+-|..... .+.... ..-+..++.|-.+...+.+
T Consensus       228 s~v~~~da~~p~~~v~~~~~~~lP~ls~~~ise~~vv~a  266 (361)
T KOG1523|consen  228 STVSFVDAAGPSERVQSVATAQLPLLSVSWISENSVVAA  266 (361)
T ss_pred             CceEEeecCCCchhccchhhccCCceeeEeecCCceeec
Confidence            999999976554 344444 4467778887766554443

>KOG0322|consensus

Probab=99.88  E-value=3e-21  Score=140.99  Aligned_cols=262  Identities=11%  Similarity=0.123  Sum_probs=187.9

Q ss_pred             eecccCCcceEEEEECCCCCEEEEecCCeEEEEEccCCceEEEec-ccCCCeEEEEEecCCCEEEEecCCCeEEEeecCc
Q psy10867         72 QLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATAS-SHYQPITIVKWSADSNFIVTGGEDGTICVWQLSR  150 (343)
Q Consensus        72 ~~~~~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~  150 (343)
                      ..+.+|.+.|+++.|-.+++++....-|.|++|++.+.+.+..++ .+...|+.+.-.|+ ..+.+-+.|+.+.+|++..
T Consensus         8 fvLRp~~~~v~s~~fqa~~rL~sg~~~G~V~~w~lqt~r~~~~~r~~g~~~it~lq~~p~-d~l~tqgRd~~L~lw~ia~   86 (323)
T KOG0322|consen    8 FVLRPHSSSVTSVLFQANERLMSGLSVGIVKMWVLQTERDLPLIRLFGRLFITNLQSIPN-DSLDTQGRDPLLILWTIAY   86 (323)
T ss_pred             eEeccccchheehhhccchhhhcccccceEEEEEeecCccchhhhhhccceeeceeecCC-cchhhcCCCceEEEEEccC
Confidence            445588999999999988887777788999999999998888888 56778999998887 5688899999999999987


Q ss_pred             cceeeeeecCCC----------CCC------------CCcc---ccccc--eeeee----cccccceEEEEeecC-CCce
Q psy10867        151 LICKQTVAFGIP----------GSS------------GKGV---TGLTE--PLHVK----SQHSLPVTHVTLSKL-GAKS  198 (343)
Q Consensus       151 ~~~~~~~~~~~~----------~~~------------~~~~---~~~~~--~~~~~----~~~~~~v~~~~~~~~-~~~~  198 (343)
                      ...+........          ...            +...   .....  .++..    .+..+.+.+..+... +...
T Consensus        87 s~~i~i~Si~~nslgFCrfSl~~~~k~~eqll~yp~rgsde~h~~D~g~~tqv~i~dd~~~~Klgsvmc~~~~~~c~s~~  166 (323)
T KOG0322|consen   87 SAFISIHSIVVNSLGFCRFSLVKKPKNSEQLLEYPSRGSDETHKQDGGDTTQVQIADDSERSKLGSVMCQDKDHACGSTF  166 (323)
T ss_pred             cceEEEeeeeccccccccceeccCCCcchhheecCCcccchhhhhccCccceeEccCchhccccCceeeeeccccccceE
Confidence            443322211100          000            0000   00000  11111    122344556554322 2225


Q ss_pred             EEEEeeCCCeEEEEecCCCceEEEe-----------ecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeeccccccccccc
Q psy10867        199 RVASVSHDRTCKIFDLCTGEDLLSL-----------ILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQ  267 (343)
Q Consensus       199 ~l~~~~~d~~i~~wd~~~~~~~~~~-----------~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~  267 (343)
                      ++++|.++|.+.+||+.++..+..+           .|..++.++.|.+.-..=++|+.+..+..|++.........   
T Consensus       167 lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rGisgga~dkl~~~Sl~~s~gslq~---  243 (323)
T KOG0322|consen  167 LLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRGISGGADDKLVMYSLNHSTGSLQI---  243 (323)
T ss_pred             EEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechhhcCCcCCCccccceeeeeccccCcccc---
Confidence            6778889999999999987443322           26778999999987777788888889999988754221111   


Q ss_pred             CCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc-cCCceEEEEEccCCCeeeecccC
Q psy10867        268 DSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVLGAFLGLLPPAIHDYDFT  341 (343)
Q Consensus       268 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~~  341 (343)
                          .....-.+-.|..+.+-||++.+|+++.|+.||||+.++.+++..++ |.+.|++++|+|+...+++++-.
T Consensus       244 ----~~e~~lknpGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~pLAVLkyHsagvn~vAfspd~~lmAaaskD  314 (323)
T KOG0322|consen  244 ----RKEITLKNPGVSGVRIRPDGKILATAGWDHRIRVYSWRTLNPLAVLKYHSAGVNAVAFSPDCELMAAASKD  314 (323)
T ss_pred             ----cceEEecCCCccceEEccCCcEEeecccCCcEEEEEeccCCchhhhhhhhcceeEEEeCCCCchhhhccCC
Confidence                11122234457889999999999999999999999999999999999 99999999999999999888753

>KOG1963|consensus

Probab=99.88  E-value=2.5e-19  Score=151.33  Aligned_cols=312  Identities=18%  Similarity=0.152  Sum_probs=221.0

Q ss_pred             eEEEecCC-------CCeEEEEecCCceEEE---EE-ecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCC--cc--c
Q psy10867          6 EVAFSYDG-------SGAISVWEPKGGTLLM---SY-KGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNS--QE--K   70 (343)
Q Consensus         6 ~~~~s~~~-------dg~i~iwd~~~~~~~~---~~-~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~--~~--~   70 (343)
                      .+++.+++       +..+.+|+..++....   .. ..|.. .+++.+++|+++++|++..||.|.+|.--.  +.  .
T Consensus       165 ~I~~~~~ge~~~i~~~~~~~~~~v~~~~~~~~~~~~~~~Htf-~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~~~t  243 (792)
T KOG1963|consen  165 SIVDNNSGEFKGIVHMCKIHIYFVPKHTKHTSSRDITVHHTF-NITCVALSPNERYLAAGDSDGRILVWRDFGSSDDSET  243 (792)
T ss_pred             cEEEcCCceEEEEEEeeeEEEEEecccceeeccchhhhhhcc-cceeEEeccccceEEEeccCCcEEEEecccccccccc
Confidence            45555555       3567888887754111   11 23444 689999999999999999999999996433  22  2


Q ss_pred             ceecccCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecC
Q psy10867         71 AQLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLS  149 (343)
Q Consensus        71 ~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~  149 (343)
                      .+.+.-|..+|.+++|+++|.+|.+ |.++.+.+|.+.+++ .+-+..-.++|..+.++||+.+.+....|+.|.+....
T Consensus       244 ~t~lHWH~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T~~-kqfLPRLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~~  322 (792)
T KOG1963|consen  244 CTLLHWHHDEVNSLSFSSDGAYLLSGGREGVLVLWQLETGK-KQFLPRLGSPILHIVVSPDSDLYSLVLEDNQIHLIKAS  322 (792)
T ss_pred             ceEEEecccccceeEEecCCceEeecccceEEEEEeecCCC-cccccccCCeeEEEEEcCCCCeEEEEecCceEEEEecc
Confidence            2556678899999999999999997 789999999999998 55666778899999999999999999999999999887


Q ss_pred             ccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-----
Q psy10867        150 RLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-----  224 (343)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-----  224 (343)
                      +.....+++...+..           -.......+-.+.++++|..  +.++..+..|.|.+||+-+.+.+..+.     
T Consensus       323 dl~~k~tIsgi~~~~-----------~~~k~~~~~l~t~~~idpr~--~~~vln~~~g~vQ~ydl~td~~i~~~~v~~~n  389 (792)
T KOG1963|consen  323 DLEIKSTISGIKPPT-----------PSTKTRPQSLTTGVSIDPRT--NSLVLNGHPGHVQFYDLYTDSTIYKLQVCDEN  389 (792)
T ss_pred             chhhhhhccCccCCC-----------ccccccccccceeEEEcCCC--CceeecCCCceEEEEeccccceeeeEEEEeec
Confidence            766555443111110           00022345567788999965  678888999999999999887776654     


Q ss_pred             -c------CCcEEEEEEcCCCCEEEEEc--------CC--CcEEEEEeecccccccccccCCCCCCccccccCcEEEEEE
Q psy10867        225 -L------DTRLTCVAFDGTEDNIYMGT--------SE--GVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSC  287 (343)
Q Consensus       225 -~------~~~i~~~~~~~~~~~l~~~~--------~d--~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  287 (343)
                       .      .-.++.++.+..|.++++..        .|  -.+++|-...........      ......|...+...++
T Consensus       390 ~~~~~~n~~v~itav~~~~~gs~maT~E~~~d~~~~~~~e~~LKFW~~n~~~kt~~L~------T~I~~PH~~~~vat~~  463 (792)
T KOG1963|consen  390 YSDGDVNIQVGITAVARSRFGSWMATLEARIDKFNFFDGEVSLKFWQYNPNSKTFILN------TKINNPHGNAFVATIF  463 (792)
T ss_pred             ccCCcceeEEeeeeehhhccceEEEEeeeeehhhhccCceEEEEEEEEcCCcceeEEE------EEEecCCCceeEEEEE
Confidence             1      12477788888899999863        22  256788766543322211      1123457766666665


Q ss_pred             cc-CCC-EEEEEeCCCcEEEEecccce----------eeeecc-cCCceEEEEEccCCCeeeec
Q psy10867        288 SI-TGI-TLLSSSADETLKIWHTISRQ----------CLRTIQ-HKGPVLGAFLGLLPPAIHDY  338 (343)
Q Consensus       288 s~-~~~-~l~s~~~dg~i~iwd~~~~~----------~~~~~~-~~~~v~~~~~sp~~~~l~~~  338 (343)
                      .+ ... ..++++.||.+++|-+...+          +...-. |..++++++|+.||..|+.+
T Consensus       464 ~~~~rs~~~vta~~dg~~KiW~~~~~~n~~k~~s~W~c~~i~sy~k~~i~a~~fs~dGslla~s  527 (792)
T KOG1963|consen  464 LNPTRSVRCVTASVDGDFKIWVFTDDSNIYKKSSNWTCKAIGSYHKTPITALCFSQDGSLLAVS  527 (792)
T ss_pred             ecCcccceeEEeccCCeEEEEEEecccccCcCccceEEeeeeccccCcccchhhcCCCcEEEEe
Confidence            44 333 78999999999999884322          111111 78899999999999777654

>PRK01742 tolB translocation protein TolB; Provisional

Probab=99.88  E-value=3.6e-20  Score=156.28  Aligned_cols=229  Identities=14%  Similarity=0.072  Sum_probs=160.4

Q ss_pred             CeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-ecC---CeEEEEEccCCceE--EEecccCCCeEEEEEecCC
Q psy10867         58 PMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SIE---TKLHMWQISSGRLL--ATASSHYQPITIVKWSADS  131 (343)
Q Consensus        58 ~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d---~~i~v~~~~~~~~~--~~~~~~~~~v~~~~~~~~~  131 (343)
                      ..|.+||.+... .+.+..+...+..++|+|||+.|+. +.+   ..|++||+.+++..  ..+.+|   ...++|+|||
T Consensus       184 ~~i~i~d~dg~~-~~~lt~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l~~~~g~---~~~~~wSPDG  259 (429)
T PRK01742        184 YEVRVADYDGFN-QFIVNRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVVASFRGH---NGAPAFSPDG  259 (429)
T ss_pred             EEEEEECCCCCC-ceEeccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEEecCCCc---cCceeECCCC
Confidence            689999987655 4445567788999999999998886 332   47999999887643  333333   4468999999


Q ss_pred             CEEEEec-CCCeEEEe--ecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEE-EeeCCC
Q psy10867        132 NFIVTGG-EDGTICVW--QLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVA-SVSHDR  207 (343)
Q Consensus       132 ~~l~s~~-~dg~i~iw--d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~-~~~~d~  207 (343)
                      +.|+.++ .+|.+.||  |+.++                       ....+..+...+....|+|++  +.++ ++..++
T Consensus       260 ~~La~~~~~~g~~~Iy~~d~~~~-----------------------~~~~lt~~~~~~~~~~wSpDG--~~i~f~s~~~g  314 (429)
T PRK01742        260 SRLAFASSKDGVLNIYVMGANGG-----------------------TPSQLTSGAGNNTEPSWSPDG--QSILFTSDRSG  314 (429)
T ss_pred             CEEEEEEecCCcEEEEEEECCCC-----------------------CeEeeccCCCCcCCEEECCCC--CEEEEEECCCC
Confidence            9888764 67876655  55443                       223344566678889999999  5555 444678


Q ss_pred             eEEEEecCCC-ceEEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEE
Q psy10867        208 TCKIFDLCTG-EDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLS  286 (343)
Q Consensus       208 ~i~~wd~~~~-~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  286 (343)
                      ...+|+++.. .....+.+..  ....|+|+|++|+..+.++ +.+||+.+......           ...+  ....+.
T Consensus       315 ~~~I~~~~~~~~~~~~l~~~~--~~~~~SpDG~~ia~~~~~~-i~~~Dl~~g~~~~l-----------t~~~--~~~~~~  378 (429)
T PRK01742        315 SPQVYRMSASGGGASLVGGRG--YSAQISADGKTLVMINGDN-VVKQDLTSGSTEVL-----------SSTF--LDESPS  378 (429)
T ss_pred             CceEEEEECCCCCeEEecCCC--CCccCCCCCCEEEEEcCCC-EEEEECCCCCeEEe-----------cCCC--CCCCce
Confidence            8888876532 2222223322  4578999999998887755 56689876432110           0011  124578


Q ss_pred             EccCCCEEEEEeCCCcEEEEecc--cceeeeecc-cCCceEEEEEccC
Q psy10867        287 CSITGITLLSSSADETLKIWHTI--SRQCLRTIQ-HKGPVLGAFLGLL  331 (343)
Q Consensus       287 ~s~~~~~l~s~~~dg~i~iwd~~--~~~~~~~~~-~~~~v~~~~~sp~  331 (343)
                      |+|||++|+.++.++.+.+|.+.  +|+.+..+. +.+.+..++|+|-
T Consensus       379 ~sPdG~~i~~~s~~g~~~~l~~~~~~G~~~~~l~~~~g~~~~p~wsp~  426 (429)
T PRK01742        379 ISPNGIMIIYSSTQGLGKVLQLVSADGRFKARLPGSDGQVKFPAWSPY  426 (429)
T ss_pred             ECCCCCEEEEEEcCCCceEEEEEECCCCceEEccCCCCCCCCcccCCC
Confidence            99999999999999988888763  578888887 7788999999985

>KOG4497|consensus

Probab=99.87  E-value=7.7e-20  Score=137.99  Aligned_cols=272  Identities=13%  Similarity=0.137  Sum_probs=189.4

Q ss_pred             EEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE--ecCCeEEEEEccCCceEEEeccc
Q psy10867         41 SMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV--SIETKLHMWQISSGRLLATASSH  118 (343)
Q Consensus        41 ~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~--~~d~~i~v~~~~~~~~~~~~~~~  118 (343)
                      -.+|||+|+++|+..+ -.+.|-|.++.+..+.+. .-+.|.-+.|..|..++.+  ..++.|.+|++...+-...+...
T Consensus        13 ~c~fSp~g~yiAs~~~-yrlviRd~~tlq~~qlf~-cldki~yieW~ads~~ilC~~yk~~~vqvwsl~Qpew~ckIdeg   90 (447)
T KOG4497|consen   13 FCSFSPCGNYIASLSR-YRLVIRDSETLQLHQLFL-CLDKIVYIEWKADSCHILCVAYKDPKVQVWSLVQPEWYCKIDEG   90 (447)
T ss_pred             ceeECCCCCeeeeeee-eEEEEeccchhhHHHHHH-HHHHhhheeeeccceeeeeeeeccceEEEEEeecceeEEEeccC
Confidence            3579999999999998 588899999888766553 3567888999999887776  57889999999988888888888


Q ss_pred             CCCeEEEEEecCCCE-EEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCc
Q psy10867        119 YQPITIVKWSADSNF-IVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAK  197 (343)
Q Consensus       119 ~~~v~~~~~~~~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  197 (343)
                      ..++..++|+|||+. |.+...+-.|.+|.+.+.....                       +.-.+..+..++|+|+|  
T Consensus        91 ~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~~-----------------------~~~pK~~~kg~~f~~dg--  145 (447)
T KOG4497|consen   91 QAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGYL-----------------------LPHPKTNVKGYAFHPDG--  145 (447)
T ss_pred             CCcceeeeECCCcceEeeeecceeEEEEEEeccceeEE-----------------------ecccccCceeEEECCCC--
Confidence            889999999999965 5556678899999998853221                       11122333445555555  


Q ss_pred             eEEEEeeCC------------------------------------CeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEE
Q psy10867        198 SRVASVSHD------------------------------------RTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNI  241 (343)
Q Consensus       198 ~~l~~~~~d------------------------------------~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l  241 (343)
                      ++.+..+.-                                    ..+.+||---.-.+..+.-.-.+..++|+|.+++|
T Consensus       146 ~f~ai~sRrDCkdyv~i~~c~~W~ll~~f~~dT~DltgieWsPdg~~laVwd~~Leykv~aYe~~lG~k~v~wsP~~qfl  225 (447)
T KOG4497|consen  146 QFCAILSRRDCKDYVQISSCKAWILLKEFKLDTIDLTGIEWSPDGNWLAVWDNVLEYKVYAYERGLGLKFVEWSPCNQFL  225 (447)
T ss_pred             ceeeeeecccHHHHHHHHhhHHHHHHHhcCCCcccccCceECCCCcEEEEecchhhheeeeeeeccceeEEEeccccceE
Confidence            333322211                                    23445553222222233344678899999999999


Q ss_pred             EEEcCCCcEEEEEeeccccccccc-------------------------------------------------------c
Q psy10867        242 YMGTSEGVIKSFCLRQVPRTRDHH-------------------------------------------------------I  266 (343)
Q Consensus       242 ~~~~~d~~i~i~d~~~~~~~~~~~-------------------------------------------------------~  266 (343)
                      ++|+.|+.+++.+--+.+...++.                                                       +
T Consensus       226 avGsyD~~lrvlnh~tWk~f~eflhl~s~~dp~~~~~~ke~~~~~ql~~~cLsf~p~~~~a~~~~~se~~YE~~~~pv~~  305 (447)
T KOG4497|consen  226 AVGSYDQMLRVLNHFTWKPFGEFLHLCSYHDPTLHLLEKETFSIVQLLHHCLSFTPTDLEAHIWEESETIYEQQMTPVKV  305 (447)
T ss_pred             EeeccchhhhhhceeeeeehhhhccchhccCchhhhhhhhhcchhhhcccccccCCCccccCccccchhhhhhhhcceee
Confidence            999999999886544322111100                                                       0


Q ss_pred             cCCCCCCccccccCcEEEEEEccCCCEEEEEeCC--CcEEEEecccceeeeecccCCceEEEEEccCCCeeeecc
Q psy10867        267 QDSTSNPDFIGHEKQVTSLSCSITGITLLSSSAD--ETLKIWHTISRQCLRTIQHKGPVLGAFLGLLPPAIHDYD  339 (343)
Q Consensus       267 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d--g~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~  339 (343)
                      ...++...+......+..++|++|..++++-...  +.+.+||++..+.-..+....+|....|.|....|+...
T Consensus       306 ~~lkp~tD~pnPk~g~g~lafs~Ds~y~aTrnd~~PnalW~Wdlq~l~l~avLiQk~piraf~WdP~~prL~vct  380 (447)
T KOG4497|consen  306 HKLKPPTDFPNPKCGAGKLAFSCDSTYAATRNDKYPNALWLWDLQNLKLHAVLIQKHPIRAFEWDPGRPRLVVCT  380 (447)
T ss_pred             ecccCCCCCCCcccccceeeecCCceEEeeecCCCCceEEEEechhhhhhhhhhhccceeEEEeCCCCceEEEEc
Confidence            0011112222334457789999999999886543  689999999888777777888999999999988877653

>KOG0649|consensus

Probab=99.87  E-value=2.7e-19  Score=129.45  Aligned_cols=253  Identities=14%  Similarity=0.062  Sum_probs=179.5

Q ss_pred             cceEEEEeCCceEEEEEcCCCeEEEEeCCCc---------c-cceecccCCcceEEEEECCCCCEEEEecCCeEEEEEcc
Q psy10867         38 SPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQ---------E-KAQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQIS  107 (343)
Q Consensus        38 ~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~---------~-~~~~~~~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~  107 (343)
                      .|.+-+++|.++++++|..+|.|.+..+++.         + .+-....|.++|+.++|.  ..+|.++.||.|+-|..+
T Consensus        12 tvf~qa~sp~~~~l~agn~~G~iav~sl~sl~s~sa~~~gk~~iv~eqahdgpiy~~~f~--d~~Lls~gdG~V~gw~W~   89 (325)
T KOG0649|consen   12 TVFAQAISPSKQYLFAGNLFGDIAVLSLKSLDSGSAEPPGKLKIVPEQAHDGPIYYLAFH--DDFLLSGGDGLVYGWEWN   89 (325)
T ss_pred             HHHHHhhCCcceEEEEecCCCeEEEEEehhhhccccCCCCCcceeeccccCCCeeeeeee--hhheeeccCceEEEeeeh
Confidence            4666788999999999999999999987532         1 122335899999999998  557777778999999876


Q ss_pred             CCce------EEE--ecccC-----CCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccc
Q psy10867        108 SGRL------LAT--ASSHY-----QPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTE  174 (343)
Q Consensus       108 ~~~~------~~~--~~~~~-----~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (343)
                      ....      +..  ...|.     -.|+++-..|..+-++.++.|+.++-||+++++                      
T Consensus        90 E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~AgGD~~~y~~dlE~G~----------------------  147 (325)
T KOG0649|consen   90 EEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFAGGDGVIYQVDLEDGR----------------------  147 (325)
T ss_pred             hhhhhccchhhhhhcCccccCcccCCccceeEeccCCCcEEEecCCeEEEEEEecCCE----------------------
Confidence            4322      101  11122     358899999988777788899999999999985                      


Q ss_pred             eeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeec---CC------cEEEEEEcCCCCEEEEEc
Q psy10867        175 PLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLIL---DT------RLTCVAFDGTEDNIYMGT  245 (343)
Q Consensus       175 ~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~---~~------~i~~~~~~~~~~~l~~~~  245 (343)
                      ..+.+++|...|.++.--...  ..+++|++||++|+||+++++++..+..   ++      .-.-.+..-+..+|++|+
T Consensus       148 i~r~~rGHtDYvH~vv~R~~~--~qilsG~EDGtvRvWd~kt~k~v~~ie~yk~~~~lRp~~g~wigala~~edWlvCGg  225 (325)
T KOG0649|consen  148 IQREYRGHTDYVHSVVGRNAN--GQILSGAEDGTVRVWDTKTQKHVSMIEPYKNPNLLRPDWGKWIGALAVNEDWLVCGG  225 (325)
T ss_pred             EEEEEcCCcceeeeeeecccC--cceeecCCCccEEEEeccccceeEEeccccChhhcCcccCceeEEEeccCceEEecC
Confidence            556678999999999884443  4799999999999999999999887752   11      111234444567888775


Q ss_pred             CCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc-cCCceE
Q psy10867        246 SEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVL  324 (343)
Q Consensus       246 ~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~  324 (343)
                       ...+.+|.++..+...         +..+   ..++..+.|-.|  .+++++..+.|.-|.+ +|..-.... .....+
T Consensus       226 -Gp~lslwhLrsse~t~---------vfpi---pa~v~~v~F~~d--~vl~~G~g~~v~~~~l-~Gvl~a~ip~~s~~c~  289 (325)
T KOG0649|consen  226 -GPKLSLWHLRSSESTC---------VFPI---PARVHLVDFVDD--CVLIGGEGNHVQSYTL-NGVLQANIPVESTACY  289 (325)
T ss_pred             -CCceeEEeccCCCceE---------EEec---ccceeEeeeecc--eEEEeccccceeeeee-ccEEEEeccCCcccee
Confidence             5678999999865543         2233   345667777544  6888888889999986 455444444 333345


Q ss_pred             EEEEccCC
Q psy10867        325 GAFLGLLP  332 (343)
Q Consensus       325 ~~~~sp~~  332 (343)
                      +..|+...
T Consensus       290 s~s~~~~p  297 (325)
T KOG0649|consen  290 SASWQTSP  297 (325)
T ss_pred             eecccCCc
Confidence            55554433

>KOG0290|consensus

Probab=99.87  E-value=1.1e-19  Score=134.84  Aligned_cols=257  Identities=14%  Similarity=0.229  Sum_probs=181.8

Q ss_pred             CeEEEEec--CCceEEEEEe-cCCCCcceEEEEeCCc-----eEEEEEcCCCeEEEEeCCCcc--cc-------eecccC
Q psy10867         15 GAISVWEP--KGGTLLMSYK-GASVLSPHSMCLLGND-----YVLGVEKGKPMIQAWPVNSQE--KA-------QLRLIC   77 (343)
Q Consensus        15 g~i~iwd~--~~~~~~~~~~-~~~~~~v~~~~~~~~~-----~~~~~~~~~~~i~iw~~~~~~--~~-------~~~~~~   77 (343)
                      +.|.|-.+  ++++.+..-. .|.- +++.+.|.|+.     .++|++++  .+|+|.+...+  ..       .....+
T Consensus        73 Nkvqiv~ld~~s~e~~~~a~fd~~Y-P~tK~~wiPd~~g~~pdlLATs~D--~LRlWri~~ee~~~~~~~~L~~~kns~~  149 (364)
T KOG0290|consen   73 NKVQIVQLDEDSGELVEDANFDHPY-PVTKLMWIPDSKGVYPDLLATSSD--FLRLWRIGDEESRVELQSVLNNNKNSEF  149 (364)
T ss_pred             CeeEEEEEccCCCceeccCCCCCCC-CccceEecCCccccCcchhhcccC--eEEEEeccCcCCceehhhhhccCccccc
Confidence            44444433  3455444332 3444 99999999975     57777776  79999987422  11       112255


Q ss_pred             CcceEEEEECC-CCCEEEE-ecCCeEEEEEccCCc---eEEEecccCCCeEEEEEecCC-CEEEEecCCCeEEEeecCcc
Q psy10867         78 PGRISSMQASP-DAAYIAV-SIETKLHMWQISSGR---LLATASSHYQPITIVKWSADS-NFIVTGGEDGTICVWQLSRL  151 (343)
Q Consensus        78 ~~~v~~~~~s~-~~~~l~~-~~d~~i~v~~~~~~~---~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~  151 (343)
                      ..+++++.|+. |-+++.+ +-|.+..|||++++.   ....+-.|..+|..++|...+ +.|++.+.||.+++||++..
T Consensus       150 ~aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~~~~~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~l  229 (364)
T KOG0290|consen  150 CAPLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGVSGTVKTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSL  229 (364)
T ss_pred             CCcccccccccCCcceeEeecccCeEEEEEEeeccccceeeEEEecCcceeEEEeccCccceEEEecCCCcEEEEEeccc
Confidence            67899999987 4456665 679999999999873   355677899999999999854 47899999999999999986


Q ss_pred             ceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCC-CeEEEEecCCCc-eEEEee-cCCc
Q psy10867        152 ICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHD-RTCKIFDLCTGE-DLLSLI-LDTR  228 (343)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d-~~i~~wd~~~~~-~~~~~~-~~~~  228 (343)
                      ....                   .+..-.....+...++|++... +++++-..| ..|.+.|++... .+..++ |.+.
T Consensus       230 eHST-------------------IIYE~p~~~~pLlRLswnkqDp-nymATf~~dS~~V~iLDiR~P~tpva~L~~H~a~  289 (364)
T KOG0290|consen  230 EHST-------------------IIYEDPSPSTPLLRLSWNKQDP-NYMATFAMDSNKVVILDIRVPCTPVARLRNHQAS  289 (364)
T ss_pred             ccce-------------------EEecCCCCCCcceeeccCcCCc-hHHhhhhcCCceEEEEEecCCCcceehhhcCccc
Confidence            4322                   1122222256778889988776 677775554 679999998654 455555 8899


Q ss_pred             EEEEEEcCCC-CEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEcc-CCCEEEEEeCC
Q psy10867        229 LTCVAFDGTE-DNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSI-TGITLLSSSAD  300 (343)
Q Consensus       229 i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~s~~~d  300 (343)
                      |+.++|.|.. ..|++++.|.++.+||+........     ..++..+. ..+.|+.+.|++ .+..++.+...
T Consensus       290 VNgIaWaPhS~~hictaGDD~qaliWDl~q~~~~~~-----~dPilay~-a~~EVNqi~Ws~~~~Dwiai~~~k  357 (364)
T KOG0290|consen  290 VNGIAWAPHSSSHICTAGDDCQALIWDLQQMPRENG-----EDPILAYT-AGGEVNQIQWSSSQPDWIAICFGK  357 (364)
T ss_pred             ccceEecCCCCceeeecCCcceEEEEecccccccCC-----CCchhhhh-ccceeeeeeecccCCCEEEEEecC
Confidence            9999999965 5899999999999999998655111     22233343 567899999996 45677776543

>KOG1524|consensus

Probab=99.87  E-value=1.7e-20  Score=150.23  Aligned_cols=247  Identities=21%  Similarity=0.234  Sum_probs=173.2

Q ss_pred             eEEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeC-------CceEEEEEcCCCeEEEEeCCCcccceecccCC
Q psy10867          6 EVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLG-------NDYVLGVEKGKPMIQAWPVNSQEKAQLRLICP   78 (343)
Q Consensus         6 ~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~-------~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~   78 (343)
                      .+.|++|.+ .+.+|+-.+......+....++-.+.+..-|       +...++.++.||.+.|.+ ..++..+....|.
T Consensus        27 ei~~~~dDh-~~~~~~~~~~~s~~~~~~p~df~pt~~h~~~rs~~~g~~~d~~~i~s~DGkf~il~-k~~rVE~sv~AH~  104 (737)
T KOG1524|consen   27 EIYFVSDDH-QIFKWSDVSRDSVEVAKLPDDFVPTDMHLGGRSSGGGKGSDTLLICSNDGRFVILN-KSARVERSISAHA  104 (737)
T ss_pred             eEEEeccCc-eEEEeecccchhhhhhhCCcccCCccccccccccCCCCCcceEEEEcCCceEEEec-ccchhhhhhhhhh
Confidence            344555544 4555543344444444433332333333222       124455555559999987 3455566777999


Q ss_pred             cceEEEEECCCCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeee
Q psy10867         79 GRISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTV  157 (343)
Q Consensus        79 ~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~  157 (343)
                      +.+.+-.|+|||.-|++ |.||.|++|. ++|-+..++.....+|+|++|.|+.+.++.+.. +.+.|=-+...      
T Consensus       105 ~A~~~gRW~~dGtgLlt~GEDG~iKiWS-rsGMLRStl~Q~~~~v~c~~W~p~S~~vl~c~g-~h~~IKpL~~n------  176 (737)
T KOG1524|consen  105 AAISSGRWSPDGAGLLTAGEDGVIKIWS-RSGMLRSTVVQNEESIRCARWAPNSNSIVFCQG-GHISIKPLAAN------  176 (737)
T ss_pred             hhhhhcccCCCCceeeeecCCceEEEEe-ccchHHHHHhhcCceeEEEEECCCCCceEEecC-CeEEEeecccc------
Confidence            99999999999987775 8999999999 577766667677789999999998886666544 44555444332      


Q ss_pred             ecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEE-eecCCcEEEEEEcC
Q psy10867        158 AFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLS-LILDTRLTCVAFDG  236 (343)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~-~~~~~~i~~~~~~~  236 (343)
                                      ..+...+.|.+-|.++.|++..  +++++|++|-..++||.. |+.+.. -.|+.+|++++|+|
T Consensus       177 ----------------~k~i~WkAHDGiiL~~~W~~~s--~lI~sgGED~kfKvWD~~-G~~Lf~S~~~ey~ITSva~np  237 (737)
T KOG1524|consen  177 ----------------SKIIRWRAHDGLVLSLSWSTQS--NIIASGGEDFRFKIWDAQ-GANLFTSAAEEYAITSVAFNP  237 (737)
T ss_pred             ----------------cceeEEeccCcEEEEeecCccc--cceeecCCceeEEeeccc-CcccccCChhccceeeeeecc
Confidence                            1445567899999999999998  899999999999999964 555444 44888999999999


Q ss_pred             CCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEE
Q psy10867        237 TEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKI  305 (343)
Q Consensus       237 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~i  305 (343)
                      + +.+++++.+ +++   +.                   ....+.|..++||+||..++.|+..|.+.+
T Consensus       238 d-~~~~v~S~n-t~R---~~-------------------~p~~GSifnlsWS~DGTQ~a~gt~~G~v~~  282 (737)
T KOG1524|consen  238 E-KDYLLWSYN-TAR---FS-------------------SPRVGSIFNLSWSADGTQATCGTSTGQLIV  282 (737)
T ss_pred             c-cceeeeeee-eee---ec-------------------CCCccceEEEEEcCCCceeeccccCceEEE
Confidence            9 555555432 222   11                   123578999999999999999999998755

>KOG1188|consensus

Probab=99.87  E-value=2.4e-20  Score=141.16  Aligned_cols=270  Identities=13%  Similarity=0.086  Sum_probs=183.4

Q ss_pred             eEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCC--CCEEE-EecCCeEEEEEccCCceEEE--ecccC-CCe
Q psy10867         49 YVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPD--AAYIA-VSIETKLHMWQISSGRLLAT--ASSHY-QPI  122 (343)
Q Consensus        49 ~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~-~~~d~~i~v~~~~~~~~~~~--~~~~~-~~v  122 (343)
                      ..++++-..|.|++||..+++.+..+.+++..++.++|..+  ...+. ++.||+|++||+++......  ..++. .+.
T Consensus        41 ~~vav~lSngsv~lyd~~tg~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~~f  120 (376)
T KOG1188|consen   41 TAVAVSLSNGSVRLYDKGTGQLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQSGTPF  120 (376)
T ss_pred             eeEEEEecCCeEEEEeccchhhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCCCCCcc
Confidence            45666666699999999999999999999999999999763  33444 47899999999998755443  34454 456


Q ss_pred             EEEEEecCCCEEEEecC----CCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCce
Q psy10867        123 TIVKWSADSNFIVTGGE----DGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKS  198 (343)
Q Consensus       123 ~~~~~~~~~~~l~s~~~----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~  198 (343)
                      .+++..-+++.+++|..    +-.|.+||++..+..                    .......|...|++++|+|..+ +
T Consensus       121 ~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~--------------------l~~~~eSH~DDVT~lrFHP~~p-n  179 (376)
T KOG1188|consen  121 ICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQL--------------------LRQLNESHNDDVTQLRFHPSDP-N  179 (376)
T ss_pred             eEeeccCcCCeEEeccccccCceEEEEEEeccccch--------------------hhhhhhhccCcceeEEecCCCC-C
Confidence            67777667788888764    667999999986431                    1233457999999999999987 8


Q ss_pred             EEEEeeCCCeEEEEecCCCc----eEEEeecCCcEEEEEEcCCC-CEEEEEcCCCcEEEEEeecccccccccccCCCC--
Q psy10867        199 RVASVSHDRTCKIFDLCTGE----DLLSLILDTRLTCVAFDGTE-DNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTS--  271 (343)
Q Consensus       199 ~l~~~~~d~~i~~wd~~~~~----~~~~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~--  271 (343)
                      +|++||.||.+.+||+....    .+..+.+.+.|.++.|..++ +.+.+-+..+...+|+++..........+....  
T Consensus       180 lLlSGSvDGLvnlfD~~~d~EeDaL~~viN~~sSI~~igw~~~~ykrI~clTH~Etf~~~ele~~~~~~~~~~~~~~~~d  259 (376)
T KOG1188|consen  180 LLLSGSVDGLVNLFDTKKDNEEDALLHVINHGSSIHLIGWLSKKYKRIMCLTHMETFAIYELEDGSEETWLENPDVSADD  259 (376)
T ss_pred             eEEeecccceEEeeecCCCcchhhHHHhhcccceeeeeeeecCCcceEEEEEccCceeEEEccCCChhhcccCccchhhh
Confidence            99999999999999987543    34556678889999999877 568888899999999998766332221110000  


Q ss_pred             CCccccccCcEEEEEEccCCCEEEEEeC-CCcEEEEec---ccc---eeeeecc--cCCceEEEEEccCCCeeeeccc
Q psy10867        272 NPDFIGHEKQVTSLSCSITGITLLSSSA-DETLKIWHT---ISR---QCLRTIQ--HKGPVLGAFLGLLPPAIHDYDF  340 (343)
Q Consensus       272 ~~~~~~~~~~v~~~~~s~~~~~l~s~~~-dg~i~iwd~---~~~---~~~~~~~--~~~~v~~~~~sp~~~~l~~~~~  340 (343)
                      .... .....+...-...+....+.++. -+...++-+   .++   +.+..+.  |..-|+++.|...+..+++++-
T Consensus       260 ~r~~-~~~dY~I~~~~~~~~~~~~l~g~~~n~~~~~~~~~~~s~~~~~~~a~l~g~~~eiVR~i~~~~~~~~l~TGGE  336 (376)
T KOG1188|consen  260 LRKE-DNCDYVINEHSPGDKDTCALAGTDSNKGTIFPLVDTSSGSLLTEPAILQGGHEEIVRDILFDVKNDVLYTGGE  336 (376)
T ss_pred             HHhh-hhhhheeecccCCCcceEEEeccccCceeEEEeeecccccccCccccccCCcHHHHHHHhhhcccceeeccCC
Confidence            0000 00111222111224445554444 445444433   333   3334444  5556778888877777777753

>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A

Probab=99.87  E-value=1.2e-18  Score=142.46  Aligned_cols=306  Identities=10%  Similarity=-0.004  Sum_probs=189.3

Q ss_pred             eEE-EecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEE
Q psy10867          6 EVA-FSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSM   84 (343)
Q Consensus         6 ~~~-~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~   84 (343)
                      .+. ++-.++|.|.+.|..+.+.+.++..... ....+.|+|||+++.+.+.||.|.++|+.+.+.+..... ......+
T Consensus         6 ~l~~V~~~~~~~v~viD~~t~~~~~~i~~~~~-~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~-G~~~~~i   83 (369)
T PF02239_consen    6 NLFYVVERGSGSVAVIDGATNKVVARIPTGGA-PHAGLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIKV-GGNPRGI   83 (369)
T ss_dssp             GEEEEEEGGGTEEEEEETTT-SEEEEEE-STT-EEEEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE--SSEEEEE
T ss_pred             cEEEEEecCCCEEEEEECCCCeEEEEEcCCCC-ceeEEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEec-CCCcceE
Confidence            344 4566789999999999999999998765 445678999998888778889999999999998866644 3456889


Q ss_pred             EECCCCCEEEEe--cCCeEEEEEccCCceEEEeccc-------CCCeEEEEEecCCCEEEE-ecCCCeEEEeecCcccee
Q psy10867         85 QASPDAAYIAVS--IETKLHMWQISSGRLLATASSH-------YQPITIVKWSADSNFIVT-GGEDGTICVWQLSRLICK  154 (343)
Q Consensus        85 ~~s~~~~~l~~~--~d~~i~v~~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~s-~~~dg~i~iwd~~~~~~~  154 (343)
                      ++++||++++++  ..+.+.++|.++.+.++.+...       ...+..+..+|....++. .-+.+.|.+-|.......
T Consensus        84 ~~s~DG~~~~v~n~~~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d~~~~  163 (369)
T PF02239_consen   84 AVSPDGKYVYVANYEPGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSDPKNL  163 (369)
T ss_dssp             EE--TTTEEEEEEEETTEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETTTSSCE
T ss_pred             EEcCCCCEEEEEecCCCceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEecccccc
Confidence            999999999974  5899999999999988877532       346778888888775554 445588888887664321


Q ss_pred             eeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEE-EEeeCCCeEEEEecCCCceEEEeec-----CCc
Q psy10867        155 QTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRV-ASVSHDRTCKIFDLCTGEDLLSLIL-----DTR  228 (343)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l-~~~~~d~~i~~wd~~~~~~~~~~~~-----~~~  228 (343)
                                           ...............|+|++  +++ ++...++.|.++|.++++.+..+..     +.+
T Consensus       164 ---------------------~~~~i~~g~~~~D~~~dpdg--ry~~va~~~sn~i~viD~~~~k~v~~i~~g~~p~~~~  220 (369)
T PF02239_consen  164 ---------------------KVTTIKVGRFPHDGGFDPDG--RYFLVAANGSNKIAVIDTKTGKLVALIDTGKKPHPGP  220 (369)
T ss_dssp             ---------------------EEEEEE--TTEEEEEE-TTS--SEEEEEEGGGTEEEEEETTTTEEEEEEE-SSSBEETT
T ss_pred             ---------------------ceeeecccccccccccCccc--ceeeecccccceeEEEeeccceEEEEeeccccccccc
Confidence                                 11122234556788999998  554 4456678999999999888776642     233


Q ss_pred             EEEEEEcCCCCE-EEEEcC-CCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEE----eCCCc
Q psy10867        229 LTCVAFDGTEDN-IYMGTS-EGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSS----SADET  302 (343)
Q Consensus       229 i~~~~~~~~~~~-l~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~----~~dg~  302 (343)
                      ...+ .+|.... .+++.. ...+-........   .......+.+..+...... .-+..+|+++++.+.    ...+.
T Consensus       221 ~~~~-php~~g~vw~~~~~~~~~~~~ig~~~v~---v~d~~~wkvv~~I~~~G~g-lFi~thP~s~~vwvd~~~~~~~~~  295 (369)
T PF02239_consen  221 GANF-PHPGFGPVWATSGLGYFAIPLIGTDPVS---VHDDYAWKVVKTIPTQGGG-LFIKTHPDSRYVWVDTFLNPDADT  295 (369)
T ss_dssp             EEEE-EETTTEEEEEEEBSSSSEEEEEE--TTT----STTTBTSEEEEEE-SSSS---EE--TT-SEEEEE-TT-SSHT-
T ss_pred             cccc-cCCCcceEEeeccccceecccccCCccc---cchhhcCeEEEEEECCCCc-ceeecCCCCccEEeeccCCCCCce
Confidence            3333 3343222 222211 1111222211110   1111122334445554455 677889999999987    45589


Q ss_pred             EEEEecccceeeeecc--cCCceEEEEEccCCCeeeecccC
Q psy10867        303 LKIWHTISRQCLRTIQ--HKGPVLGAFLGLLPPAIHDYDFT  341 (343)
Q Consensus       303 i~iwd~~~~~~~~~~~--~~~~v~~~~~sp~~~~l~~~~~~  341 (343)
                      |.++|.++.+.+.++.  ....+..+.|+++|+++..+.+.
T Consensus       296 v~viD~~tl~~~~~i~~~~~~~~~h~ef~~dG~~v~vS~~~  336 (369)
T PF02239_consen  296 VQVIDKKTLKVVKTITPGPGKRVVHMEFNPDGKEVWVSVWD  336 (369)
T ss_dssp             EEEEECCGTEEEE-HHHHHT--EEEEEE-TTSSEEEEEEE-
T ss_pred             EEEEECcCcceeEEEeccCCCcEeccEECCCCCEEEEEEec
Confidence            9999999999888887  33459999999999998877543

...

>PRK01742 tolB translocation protein TolB; Provisional

Probab=99.87  E-value=6.2e-20  Score=154.87  Aligned_cols=236  Identities=15%  Similarity=0.074  Sum_probs=162.9

Q ss_pred             CCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcC---CCeEEEEeCCCcccceecccCCcceEEEEECCCC
Q psy10867         14 SGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKG---KPMIQAWPVNSQEKAQLRLICPGRISSMQASPDA   90 (343)
Q Consensus        14 dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~---~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~   90 (343)
                      +..|.+||..... .+.+..+.. .+.+++|+|||+.++..+.   +..|.+||+.+++..... ...+....++|+|||
T Consensus       183 ~~~i~i~d~dg~~-~~~lt~~~~-~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l~-~~~g~~~~~~wSPDG  259 (429)
T PRK01742        183 PYEVRVADYDGFN-QFIVNRSSQ-PLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVVA-SFRGHNGAPAFSPDG  259 (429)
T ss_pred             eEEEEEECCCCCC-ceEeccCCC-ccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEEe-cCCCccCceeECCCC
Confidence            4689999985444 566777777 8999999999977766543   247999999887643222 222334578999999


Q ss_pred             CEEEEe--cCCe--EEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEec-CCCeEEEeecCccceeeeeecCCCCCC
Q psy10867         91 AYIAVS--IETK--LHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGG-EDGTICVWQLSRLICKQTVAFGIPGSS  165 (343)
Q Consensus        91 ~~l~~~--~d~~--i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~  165 (343)
                      +.|+.+  .+|.  |++||+.+++. ..+..+...+....|+|||+.|+.++ .+|...+|+++....            
T Consensus       260 ~~La~~~~~~g~~~Iy~~d~~~~~~-~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~------------  326 (429)
T PRK01742        260 SRLAFASSKDGVLNIYVMGANGGTP-SQLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGG------------  326 (429)
T ss_pred             CEEEEEEecCCcEEEEEEECCCCCe-EeeccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEECCCC------------
Confidence            988863  4665  45556666654 45566777788999999999777554 578888888754211            


Q ss_pred             CCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEc
Q psy10867        166 GKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGT  245 (343)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~  245 (343)
                               ....+ .+..  ....|+|++  +.++..+.++ +.+||+.+++....... .....+.|+|+|++|+.++
T Consensus       327 ---------~~~~l-~~~~--~~~~~SpDG--~~ia~~~~~~-i~~~Dl~~g~~~~lt~~-~~~~~~~~sPdG~~i~~~s  390 (429)
T PRK01742        327 ---------GASLV-GGRG--YSAQISADG--KTLVMINGDN-VVKQDLTSGSTEVLSST-FLDESPSISPNGIMIIYSS  390 (429)
T ss_pred             ---------CeEEe-cCCC--CCccCCCCC--CEEEEEcCCC-EEEEECCCCCeEEecCC-CCCCCceECCCCCEEEEEE
Confidence                     11111 2222  457899999  6777776665 55699988875432222 2345678999999999999


Q ss_pred             CCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccC
Q psy10867        246 SEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSIT  290 (343)
Q Consensus       246 ~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~  290 (343)
                      .++.+.+|++....         +.....+..|.+.+...+|+|-
T Consensus       391 ~~g~~~~l~~~~~~---------G~~~~~l~~~~g~~~~p~wsp~  426 (429)
T PRK01742        391 TQGLGKVLQLVSAD---------GRFKARLPGSDGQVKFPAWSPY  426 (429)
T ss_pred             cCCCceEEEEEECC---------CCceEEccCCCCCCCCcccCCC
Confidence            99988888875421         2224456677888888999984

>KOG2110|consensus

Probab=99.87  E-value=4.6e-18  Score=130.24  Aligned_cols=215  Identities=14%  Similarity=0.213  Sum_probs=160.2

Q ss_pred             EEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEEe
Q psy10867         17 ISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVS   96 (343)
Q Consensus        17 i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~   96 (343)
                      .++++.+.-........... .|..+-|+..-..++...+...+++.+.+.+..+... ..+.+|.++.++  .+.|++.
T Consensus        28 yk~~~~~~~~k~~~~~~~~~-~IvEmLFSSSLvaiV~~~qpr~Lkv~~~Kk~~~ICe~-~fpt~IL~VrmN--r~RLvV~  103 (391)
T KOG2110|consen   28 YKIFSCSPFEKCFSKDTEGV-SIVEMLFSSSLVAIVSIKQPRKLKVVHFKKKTTICEI-FFPTSILAVRMN--RKRLVVC  103 (391)
T ss_pred             eeEEecCchHHhhcccCCCe-EEEEeecccceeEEEecCCCceEEEEEcccCceEEEE-ecCCceEEEEEc--cceEEEE
Confidence            56666654333222222222 5666667654333333333346899998877766433 346789999986  4567766


Q ss_pred             cCCeEEEEEccCCceEEEecc---cCCCeEEEEEecCCCEEEEec--CCCeEEEeecCccceeeeeecCCCCCCCCcccc
Q psy10867         97 IETKLHMWQISSGRLLATASS---HYQPITIVKWSADSNFIVTGG--EDGTICVWQLSRLICKQTVAFGIPGSSGKGVTG  171 (343)
Q Consensus        97 ~d~~i~v~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  171 (343)
                      -...|+|||+++.+++.++..   +...+.++.+++.+.+++.-+  ..|.|.+||..+.+                   
T Consensus       104 Lee~IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s~t~GdV~l~d~~nl~-------------------  164 (391)
T KOG2110|consen  104 LEESIYIYDIKDMKLLHTIETTPPNPKGLCALSPNNANCYLAYPGSTTSGDVVLFDTINLQ-------------------  164 (391)
T ss_pred             EcccEEEEecccceeehhhhccCCCccceEeeccCCCCceEEecCCCCCceEEEEEcccce-------------------
Confidence            666699999999999887753   444566666666666887633  47899999998864                   


Q ss_pred             ccceeeeecccccceEEEEeecCCCceEEEEeeCCCe-EEEEecCCCceEEEeec---CCcEEEEEEcCCCCEEEEEcCC
Q psy10867        172 LTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRT-CKIFDLCTGEDLLSLIL---DTRLTCVAFDGTEDNIYMGTSE  247 (343)
Q Consensus       172 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~-i~~wd~~~~~~~~~~~~---~~~i~~~~~~~~~~~l~~~~~d  247 (343)
                         +...+..|++.+.+++|+++|  .+||++++.|+ |||+.+.+|+.+.+++-   ...|.+++|+|++++|++.+..
T Consensus       165 ---~v~~I~aH~~~lAalafs~~G--~llATASeKGTVIRVf~v~~G~kl~eFRRG~~~~~IySL~Fs~ds~~L~~sS~T  239 (391)
T KOG2110|consen  165 ---PVNTINAHKGPLAALAFSPDG--TLLATASEKGTVIRVFSVPEGQKLYEFRRGTYPVSIYSLSFSPDSQFLAASSNT  239 (391)
T ss_pred             ---eeeEEEecCCceeEEEECCCC--CEEEEeccCceEEEEEEcCCccEeeeeeCCceeeEEEEEEECCCCCeEEEecCC
Confidence               556667899999999999999  89999999987 69999999999999873   4569999999999999999999


Q ss_pred             CcEEEEEeeccc
Q psy10867        248 GVIKSFCLRQVP  259 (343)
Q Consensus       248 ~~i~i~d~~~~~  259 (343)
                      ++|++|.+....
T Consensus       240 eTVHiFKL~~~~  251 (391)
T KOG2110|consen  240 ETVHIFKLEKVS  251 (391)
T ss_pred             CeEEEEEecccc
Confidence            999999997644

>KOG0642|consensus

Probab=99.86  E-value=8.8e-21  Score=152.43  Aligned_cols=248  Identities=15%  Similarity=0.143  Sum_probs=176.7

Q ss_pred             cccCCcceEEEEECCCCCEEEE-ecCCeEEEEEccC--------CceEEEecccCCCeEEEEEecCCCEEEEecCCCeEE
Q psy10867         74 RLICPGRISSMQASPDAAYIAV-SIETKLHMWQISS--------GRLLATASSHYQPITIVKWSADSNFIVTGGEDGTIC  144 (343)
Q Consensus        74 ~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~--------~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~  144 (343)
                      +..|.+.|..++|.|-...|++ +.||.|.+|+++.        -+++.++.+|.++|.|+++.++++.+++|+.||+|+
T Consensus       290 l~s~~d~ir~l~~~~sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ysgg~Dg~I~  369 (577)
T KOG0642|consen  290 LRSHDDCIRALAFHPSEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYSGGIDGTIR  369 (577)
T ss_pred             eecchhhhhhhhcCCCCCeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceEEEeeccCceee
Confidence            4467888999999997766665 7899999999932        156788999999999999999999999999999999


Q ss_pred             EeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee
Q psy10867        145 VWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI  224 (343)
Q Consensus       145 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~  224 (343)
                      .|++....-.            ............+.+|...++.+++++..  ..|++++.||+++.|+...... .++.
T Consensus       370 ~w~~p~n~dp------------~ds~dp~vl~~~l~Ghtdavw~l~~s~~~--~~Llscs~DgTvr~w~~~~~~~-~~f~  434 (577)
T KOG0642|consen  370 CWNLPPNQDP------------DDSYDPSVLSGTLLGHTDAVWLLALSSTK--DRLLSCSSDGTVRLWEPTEESP-CTFG  434 (577)
T ss_pred             eeccCCCCCc------------ccccCcchhccceeccccceeeeeecccc--cceeeecCCceEEeeccCCcCc-cccC
Confidence            9987632100            00011112456678999999999999988  7899999999999999766555 3333


Q ss_pred             ---cCCcEEEEEEcCCC-CEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCC
Q psy10867        225 ---LDTRLTCVAFDGTE-DNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSAD  300 (343)
Q Consensus       225 ---~~~~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d  300 (343)
                         ..+...++.+-... ...++...-+.-.++++........+   ..... ........+..+.++|...+.+++..|
T Consensus       435 ~~~e~g~Plsvd~~ss~~a~~~~s~~~~~~~~~~~ev~s~~~~~---~s~~~-~~~~~~~~in~vVs~~~~~~~~~~hed  510 (577)
T KOG0642|consen  435 EPKEHGYPLSVDRTSSRPAHSLASFRFGYTSIDDMEVVSDLLIF---ESSAS-PGPRRYPQINKVVSHPTADITFTAHED  510 (577)
T ss_pred             CccccCCcceEeeccchhHhhhhhcccccccchhhhhhhheeec---cccCC-CcccccCccceEEecCCCCeeEecccC
Confidence               23334555554333 22222222222223333222211111   00000 011112457788899999999999999


Q ss_pred             CcEEEEecccceeeeecc-cCCceEEEEEccCCCeeeeccc
Q psy10867        301 ETLKIWHTISRQCLRTIQ-HKGPVLGAFLGLLPPAIHDYDF  340 (343)
Q Consensus       301 g~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~  340 (343)
                      +.|+++|..+++++.... |...++++++.|+|.+|++++-
T Consensus       511 ~~Ir~~dn~~~~~l~s~~a~~~svtslai~~ng~~l~s~s~  551 (577)
T KOG0642|consen  511 RSIRFFDNKTGKILHSMVAHKDSVTSLAIDPNGPYLMSGSH  551 (577)
T ss_pred             CceecccccccccchheeeccceecceeecCCCceEEeecC
Confidence            999999999999999988 9999999999999999999863

>KOG1587|consensus

Probab=99.86  E-value=1.5e-19  Score=151.79  Aligned_cols=263  Identities=12%  Similarity=0.163  Sum_probs=186.4

Q ss_pred             CeEEEEeCCCcccceecccCCcceEEEEECCCC-CEEEE-ecCCeEEEEEccCCce--EE----EecccCCCeEEEEEec
Q psy10867         58 PMIQAWPVNSQEKAQLRLICPGRISSMQASPDA-AYIAV-SIETKLHMWQISSGRL--LA----TASSHYQPITIVKWSA  129 (343)
Q Consensus        58 ~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~-~~d~~i~v~~~~~~~~--~~----~~~~~~~~v~~~~~~~  129 (343)
                      +.+.+|++...............|.++.|+|.. .++++ +.+|.|.+||+..+..  ..    ....|..++..+.|..
T Consensus       222 ~~~~vW~~~~p~~Pe~~~~~~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW~~  301 (555)
T KOG1587|consen  222 GVLLVWSLKNPNTPELVLESPSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVWLQ  301 (555)
T ss_pred             ceEEEEecCCCCCceEEEecCCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEEec
Confidence            478999998874444445667899999999954 56666 4799999999987754  22    2236889999999976


Q ss_pred             CC--CEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCC
Q psy10867        130 DS--NFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDR  207 (343)
Q Consensus       130 ~~--~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~  207 (343)
                      +.  .-+++++.||.|+.|+++............          .......-......+++++|.+..+ ..++.|+++|
T Consensus       302 ~~~~~~f~s~ssDG~i~~W~~~~l~~P~e~~~~~----------~~~~~~~~~~~~~~~t~~~F~~~~p-~~FiVGTe~G  370 (555)
T KOG1587|consen  302 NEHNTEFFSLSSDGSICSWDTDMLSLPVEGLLLE----------SKKHKGQQSSKAVGATSLKFEPTDP-NHFIVGTEEG  370 (555)
T ss_pred             cCCCCceEEEecCCcEeeeeccccccchhhcccc----------cccccccccccccceeeEeeccCCC-ceEEEEcCCc
Confidence            44  449999999999999887654322111000          0000000112345688999998876 7899999999


Q ss_pred             eEEEEec---CCCc-----eE-EEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccc
Q psy10867        208 TCKIFDL---CTGE-----DL-LSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGH  278 (343)
Q Consensus       208 ~i~~wd~---~~~~-----~~-~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~  278 (343)
                      .|.--+-   +...     .. ....|.++|.++.++|=+..++..+.|-.++||.....          ..++..+..+
T Consensus       371 ~v~~~~r~g~~~~~~~~~~~~~~~~~h~g~v~~v~~nPF~~k~fls~gDW~vriWs~~~~----------~~Pl~~~~~~  440 (555)
T KOG1587|consen  371 KVYKGCRKGYTPAPEVSYKGHSTFITHIGPVYAVSRNPFYPKNFLSVGDWTVRIWSEDVI----------ASPLLSLDSS  440 (555)
T ss_pred             EEEEEeccCCcccccccccccccccccCcceEeeecCCCccceeeeeccceeEeccccCC----------CCcchhhhhc
Confidence            9887332   2222     11 11226889999999998877766666999999987732          2235556667


Q ss_pred             cCcEEEEEEccCCC-EEEEEeCCCcEEEEecccc--eeeeecc-cCCceEEEEEccCCCeeeecccC
Q psy10867        279 EKQVTSLSCSITGI-TLLSSSADETLKIWHTISR--QCLRTIQ-HKGPVLGAFLGLLPPAIHDYDFT  341 (343)
Q Consensus       279 ~~~v~~~~~s~~~~-~l~s~~~dg~i~iwd~~~~--~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~~  341 (343)
                      ...+++++|||... .++++..||.|.+||+...  .++.+.. .....+.+.|+++|+.|++|+..
T Consensus       441 ~~~v~~vaWSptrpavF~~~d~~G~l~iWDLl~~~~~Pv~s~~~~~~~l~~~~~s~~g~~lavGd~~  507 (555)
T KOG1587|consen  441 PDYVTDVAWSPTRPAVFATVDGDGNLDIWDLLQDDEEPVLSQKVCSPALTRVRWSPNGKLLAVGDAN  507 (555)
T ss_pred             cceeeeeEEcCcCceEEEEEcCCCceehhhhhccccCCcccccccccccceeecCCCCcEEEEecCC
Confidence            78899999999764 6778888999999998754  3444444 55667788999999999998865

>KOG0771|consensus

Probab=99.86  E-value=1.9e-20  Score=145.48  Aligned_cols=187  Identities=21%  Similarity=0.266  Sum_probs=148.6

Q ss_pred             EEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEE
Q psy10867        123 TIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVAS  202 (343)
Q Consensus       123 ~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~  202 (343)
                      ..++|+++|..+++|+.||.+|+|+..+..                      .+.....|...|.++.|+|++  ++|++
T Consensus       148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~~----------------------t~l~e~~~~~eV~DL~FS~dg--k~las  203 (398)
T KOG0771|consen  148 KVVAFNGDGSKLATGGTDGTLRVWEWPSML----------------------TILEEIAHHAEVKDLDFSPDG--KFLAS  203 (398)
T ss_pred             eEEEEcCCCCEeeeccccceEEEEecCcch----------------------hhhhhHhhcCccccceeCCCC--cEEEE
Confidence            689999999999999999999999977653                      344455799999999999999  89999


Q ss_pred             eeCCCeEEEEecCCCceEEEee---cCCcEEEEEEcCCC---CE--EEEEcCCCcEEEEEeecccccccccccCCCCCCc
Q psy10867        203 VSHDRTCKIFDLCTGEDLLSLI---LDTRLTCVAFDGTE---DN--IYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPD  274 (343)
Q Consensus       203 ~~~d~~i~~wd~~~~~~~~~~~---~~~~i~~~~~~~~~---~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~  274 (343)
                      .+.| ..+||+.+++..+....   .+.....+.|+.++   .+  ++.....+.|..||+.........      ....
T Consensus       204 ig~d-~~~VW~~~~g~~~a~~t~~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l------~~~~  276 (398)
T KOG0771|consen  204 IGAD-SARVWSVNTGAALARKTPFSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFL------RLRK  276 (398)
T ss_pred             ecCC-ceEEEEeccCchhhhcCCcccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeecccccc------chhh
Confidence            9999 99999999997666554   34457788888877   32  333345667888887765432110      0111


Q ss_pred             cccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc--cCCceEEEEEccCCCeeeeccc
Q psy10867        275 FIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ--HKGPVLGAFLGLLPPAIHDYDF  340 (343)
Q Consensus       275 ~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~--~~~~v~~~~~sp~~~~l~~~~~  340 (343)
                      .......|++++.+++|+++|.|+.||.|-|++..+.+.++.++  |...|+.+.|+||.+++++.+.
T Consensus       277 ~~~~~~siSsl~VS~dGkf~AlGT~dGsVai~~~~~lq~~~~vk~aH~~~VT~ltF~Pdsr~~~svSs  344 (398)
T KOG0771|consen  277 KIKRFKSISSLAVSDDGKFLALGTMDGSVAIYDAKSLQRLQYVKEAHLGFVTGLTFSPDSRYLASVSS  344 (398)
T ss_pred             hhhccCcceeEEEcCCCcEEEEeccCCcEEEEEeceeeeeEeehhhheeeeeeEEEcCCcCccccccc
Confidence            22234579999999999999999999999999999999988887  9999999999999999987654

>KOG0771|consensus

Probab=99.86  E-value=3.4e-20  Score=144.14  Aligned_cols=198  Identities=15%  Similarity=0.192  Sum_probs=157.0

Q ss_pred             eEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCCceEEEecc-
Q psy10867         40 HSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATASS-  117 (343)
Q Consensus        40 ~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~-  117 (343)
                      .+++|+++|..++++..||++|+|++.+...+.....|...|.++.|+|||++|++ +.| ..+||+.++|..++.... 
T Consensus       148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a~~t~~  226 (398)
T KOG0771|consen  148 KVVAFNGDGSKLATGGTDGTLRVWEWPSMLTILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAALARKTPF  226 (398)
T ss_pred             eEEEEcCCCCEeeeccccceEEEEecCcchhhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCchhhhcCCc
Confidence            68999999999999999999999998888888777789999999999999999998 777 999999999977766552 


Q ss_pred             -cCCCeEEEEEecCC-----CEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEe
Q psy10867        118 -HYQPITIVKWSADS-----NFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTL  191 (343)
Q Consensus       118 -~~~~v~~~~~~~~~-----~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  191 (343)
                       .......+.|+.++     ..++....-+.|+.||+........+                 +..........|.++++
T Consensus       227 ~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l-----------------~~~~~~~~~~siSsl~V  289 (398)
T KOG0771|consen  227 SKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFL-----------------RLRKKIKRFKSISSLAV  289 (398)
T ss_pred             ccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeecccccc-----------------chhhhhhccCcceeEEE
Confidence             23346678888766     23333344566777776543211000                 12222234457999999


Q ss_pred             ecCCCceEEEEeeCCCeEEEEecCCCceEEEee--cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeec
Q psy10867        192 SKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI--LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQ  257 (343)
Q Consensus       192 ~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~  257 (343)
                      +++|  ++++.|+.||.|.+++..+.+.++..+  |..-|+.+.|+|+.++++.-+.+....+..+.-
T Consensus       290 S~dG--kf~AlGT~dGsVai~~~~~lq~~~~vk~aH~~~VT~ltF~Pdsr~~~svSs~~~~~v~~l~v  355 (398)
T KOG0771|consen  290 SDDG--KFLALGTMDGSVAIYDAKSLQRLQYVKEAHLGFVTGLTFSPDSRYLASVSSDNEAAVTKLAV  355 (398)
T ss_pred             cCCC--cEEEEeccCCcEEEEEeceeeeeEeehhhheeeeeeEEEcCCcCcccccccCCceeEEEEee
Confidence            9999  899999999999999999988887776  677899999999999999999999988888765

>KOG4227|consensus

Probab=99.86  E-value=3.6e-19  Score=137.58  Aligned_cols=257  Identities=11%  Similarity=0.077  Sum_probs=187.6

Q ss_pred             EEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCc------ccceecc-cCCcceEEEEECCCCCEEEE-ecCCeE
Q psy10867         30 SYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQ------EKAQLRL-ICPGRISSMQASPDAAYIAV-SIETKL  101 (343)
Q Consensus        30 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~------~~~~~~~-~~~~~v~~~~~s~~~~~l~~-~~d~~i  101 (343)
                      .+.+|.+ -|.++.|+.++++|++|++|-.+++|+++..      +++.... .|...|.|++|...++++.+ +.+++|
T Consensus        51 D~~~H~G-CiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~~V  129 (609)
T KOG4227|consen   51 DVREHTG-CINALQFSHNDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERWGTV  129 (609)
T ss_pred             hhhhhcc-ccceeeeccCCeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCCCccee
Confidence            3567888 9999999999999999999999999998642      3343333 56689999999988888887 578999


Q ss_pred             EEEEccCCceEEEecc--cCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeee
Q psy10867        102 HMWQISSGRLLATASS--HYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVK  179 (343)
Q Consensus       102 ~v~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (343)
                      ..-|+++.+.+..+..  ..+.|+.+..+|..+.|++.+.++.|.+||.+......                   ....+
T Consensus       130 I~HDiEt~qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~~~-------------------~~~~~  190 (609)
T KOG4227|consen  130 IKHDIETKQSIYVANENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQNPI-------------------SLVLP  190 (609)
T ss_pred             EeeecccceeeeeecccCcccceeecccCCCCceEEEEecCceEEEEeccCCCCCC-------------------ceeee
Confidence            9999999888776642  23589999999999999999999999999998764221                   11122


Q ss_pred             cccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCc-----------------------------------------
Q psy10867        180 SQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGE-----------------------------------------  218 (343)
Q Consensus       180 ~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~-----------------------------------------  218 (343)
                      .........+.|+|..+ .+|++++..+-+-+||.+...                                         
T Consensus       191 AN~~~~F~t~~F~P~~P-~Li~~~~~~~G~~~~D~R~~~~~~~~~~~~~~L~~~~~~~M~~~~~~~G~Q~msiRR~~~P~  269 (609)
T KOG4227|consen  191 ANSGKNFYTAEFHPETP-ALILVNSETGGPNVFDRRMQARPVYQRSMFKGLPQENTEWMGSLWSPSGNQFMSIRRGKCPL  269 (609)
T ss_pred             cCCCccceeeeecCCCc-eeEEeccccCCCCceeeccccchHHhhhccccCcccchhhhheeeCCCCCeehhhhccCCCE
Confidence            23344566777777765 677777777777777765311                                         


Q ss_pred             --------e-EEEeecC-------CcEEEEEEcCCCCEEEEEcCCCcEEEEEeeccccccccc------------ccCCC
Q psy10867        219 --------D-LLSLILD-------TRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHH------------IQDST  270 (343)
Q Consensus       219 --------~-~~~~~~~-------~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~------------~~~~~  270 (343)
                              + +..+.|.       ..+.+++|..+-. +++|+.+=.|++|.+.......-+.            +.-..
T Consensus       270 ~~D~~S~R~~V~k~D~N~~GY~N~~T~KS~~F~~D~~-v~tGSD~~~i~~WklP~~~ds~G~~~IG~~~~~~~~~~~i~~  348 (609)
T KOG4227|consen  270 YFDFISQRCFVLKSDHNPNGYCNIKTIKSMTFIDDYT-VATGSDHWGIHIWKLPRANDSYGFTQIGHDEEEMPSEIFIEK  348 (609)
T ss_pred             EeeeecccceeEeccCCCCcceeeeeeeeeeeeccee-eeccCcccceEEEecCCCccccCccccCcchhhCchhheecc
Confidence                    0 1111111       1255566665433 8889889999999886533222110            11123


Q ss_pred             CCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEec
Q psy10867        271 SNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHT  308 (343)
Q Consensus       271 ~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~  308 (343)
                      .+..+++|..-++.+.|+|...+|++.+-...+++|.-
T Consensus       349 ~~~VLrGHRSv~NQVRF~~H~~~l~SSGVE~~~KlWS~  386 (609)
T KOG4227|consen  349 ELTVLRGHRSVPNQVRFSQHNNLLVSSGVENSFKLWSD  386 (609)
T ss_pred             eeEEEecccccccceeecCCcceEeccchhhheecccc
Confidence            45678899999999999999999999999999999974

>KOG1334|consensus

Probab=99.85  E-value=2.5e-20  Score=147.42  Aligned_cols=293  Identities=11%  Similarity=0.092  Sum_probs=219.0

Q ss_pred             EEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccc-eecccCCcceEEEEECCC--CCEEE-EecCCeEEE
Q psy10867         28 LMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKA-QLRLICPGRISSMQASPD--AAYIA-VSIETKLHM  103 (343)
Q Consensus        28 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~-~~~~~~~~~v~~~~~s~~--~~~l~-~~~d~~i~v  103 (343)
                      ...+..|.+ .|..+.|+..|..+++|++|..|.+||+..+... ....+|...|....|-|.  .+-++ ++.||.+++
T Consensus       135 ~~kL~~H~G-cVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgqvr~  213 (559)
T KOG1334|consen  135 QKKLNKHKG-CVNTVHFNQRGDVLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFSGDRTIVTSSRDGQVRV  213 (559)
T ss_pred             hhcccCCCC-ccceeeecccCceeeccCccceEEeehhhccCcccccccccccchhhhhccCCCCCcCceeccccCceee
Confidence            456788999 9999999999999999999999999999988776 444589989988889883  34555 478999998


Q ss_pred             EEccCCce---EEEecccCCCeEEEEEecC-CCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeee
Q psy10867        104 WQISSGRL---LATASSHYQPITIVKWSAD-SNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVK  179 (343)
Q Consensus       104 ~~~~~~~~---~~~~~~~~~~v~~~~~~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (343)
                      =.+.....   ...+..|.++|..++.-|+ ...|.+++.|+.+.-+|++.......+                   ...
T Consensus       214 s~i~~t~~~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~-------------------~cr  274 (559)
T KOG1334|consen  214 SEILETGYVENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKF-------------------VCR  274 (559)
T ss_pred             eeeccccceecceecccccCccceeeecCCCCCcccccccccceeeeeeccCCcccee-------------------eee
Confidence            77643322   3456679999999999984 457899999999999999886543322                   112


Q ss_pred             ccccc---ceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceE------EEe-------ecCCcEEEEEEcCCCCEEEE
Q psy10867        180 SQHSL---PVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDL------LSL-------ILDTRLTCVAFDGTEDNIYM  243 (343)
Q Consensus       180 ~~~~~---~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~------~~~-------~~~~~i~~~~~~~~~~~l~~  243 (343)
                      ..+..   ....++..|... ..+++++.|..+++||.+.-...      .++       ...-.|++++|+.++.-|++
T Consensus       275 ~~~~~~~v~L~~Ia~~P~nt-~~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ysh~~sElLa  353 (559)
T KOG1334|consen  275 EADEKERVGLYTIAVDPRNT-NEFAVGGSDQFARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNITGLVYSHDGSELLA  353 (559)
T ss_pred             ccCCccceeeeeEecCCCCc-cccccCChhhhhhhhcccchhhccccchhhhcCCccccccCcccceeEEecCCccceee
Confidence            22333   567889999875 68999999999999998753321      222       12446999999999998999


Q ss_pred             EcCCCcEEEEEeecccccc--cccccCCCCCCccccccCc--EEEEE-EccCCCEEEEEeCCCcEEEEecccceeeeecc
Q psy10867        244 GTSEGVIKSFCLRQVPRTR--DHHIQDSTSNPDFIGHEKQ--VTSLS-CSITGITLLSSSADETLKIWHTISRQCLRTIQ  318 (343)
Q Consensus       244 ~~~d~~i~i~d~~~~~~~~--~~~~~~~~~~~~~~~~~~~--v~~~~-~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~  318 (343)
                      +..|-.|++|.-....-..  ............+++|...  |..+- |-|...|+++||.=|.|.||+-.+++.++.++
T Consensus       354 SYnDe~IYLF~~~~~~G~~p~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsEyVvSGSDCGhIFiW~K~t~eii~~Me  433 (559)
T KOG1334|consen  354 SYNDEDIYLFNKSMGDGSEPDPSSPREQYVKRVYKGHRNSRTVKGVNFFGPRSEYVVSGSDCGHIFIWDKKTGEIIRFME  433 (559)
T ss_pred             eecccceEEeccccccCCCCCCCcchhhccchhhcccccccccceeeeccCccceEEecCccceEEEEecchhHHHHHhh
Confidence            9999999999433221111  0000001112237788754  55554 57888999999999999999999999999888


Q ss_pred             -cCCceEEEEEccCCCeeeecccC
Q psy10867        319 -HKGPVLGAFLGLLPPAIHDYDFT  341 (343)
Q Consensus       319 -~~~~v~~~~~sp~~~~l~~~~~~  341 (343)
                       ...-|+|+.=+|--..|+++++.
T Consensus       434 gDr~VVNCLEpHP~~PvLAsSGid  457 (559)
T KOG1334|consen  434 GDRHVVNCLEPHPHLPVLASSGID  457 (559)
T ss_pred             cccceEeccCCCCCCchhhccCCc
Confidence             44488999999999999998764

>KOG4497|consensus

Probab=99.85  E-value=3.7e-19  Score=134.34  Aligned_cols=279  Identities=13%  Similarity=0.110  Sum_probs=197.0

Q ss_pred             CCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCc-eEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCC
Q psy10867         13 GSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGND-YVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAA   91 (343)
Q Consensus        13 ~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~   91 (343)
                      .++.|.+|++...+-...+..... .+.+++||||| .++.++.-+-.|.+|.+.+.+..... ..+..+..++|+|||+
T Consensus        69 k~~~vqvwsl~Qpew~ckIdeg~a-gls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~~~~-~pK~~~kg~~f~~dg~  146 (447)
T KOG4497|consen   69 KDPKVQVWSLVQPEWYCKIDEGQA-GLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGYLLP-HPKTNVKGYAFHPDGQ  146 (447)
T ss_pred             ccceEEEEEeecceeEEEeccCCC-cceeeeECCCcceEeeeecceeEEEEEEeccceeEEec-ccccCceeEEECCCCc
Confidence            478999999999998889998888 99999999999 66677777789999999987765433 3345678999999999


Q ss_pred             EEEEec--CC--eEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCC
Q psy10867         92 YIAVSI--ET--KLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGK  167 (343)
Q Consensus        92 ~l~~~~--d~--~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~  167 (343)
                      +.+...  |.  -+.+..-..-..+..+...+-..+.+.|+|||+.|+.         ||---...              
T Consensus       147 f~ai~sRrDCkdyv~i~~c~~W~ll~~f~~dT~DltgieWsPdg~~laV---------wd~~Leyk--------------  203 (447)
T KOG4497|consen  147 FCAILSRRDCKDYVQISSCKAWILLKEFKLDTIDLTGIEWSPDGNWLAV---------WDNVLEYK--------------  203 (447)
T ss_pred             eeeeeecccHHHHHHHHhhHHHHHHHhcCCCcccccCceECCCCcEEEE---------ecchhhhe--------------
Confidence            998642  22  2333333333445556656667788999999887765         44221100              


Q ss_pred             ccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCce----------------------------
Q psy10867        168 GVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGED----------------------------  219 (343)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~----------------------------  219 (343)
                              +. .....-.+..++|+|.+  ++++.|+.|+.+|+.+--+-+.                            
T Consensus       204 --------v~-aYe~~lG~k~v~wsP~~--qflavGsyD~~lrvlnh~tWk~f~eflhl~s~~dp~~~~~~ke~~~~~ql  272 (447)
T KOG4497|consen  204 --------VY-AYERGLGLKFVEWSPCN--QFLAVGSYDQMLRVLNHFTWKPFGEFLHLCSYHDPTLHLLEKETFSIVQL  272 (447)
T ss_pred             --------ee-eeeeccceeEEEecccc--ceEEeeccchhhhhhceeeeeehhhhccchhccCchhhhhhhhhcchhhh
Confidence                    00 01123567889999988  7999999999888765321100                            


Q ss_pred             --------------------------------EEEee-------cCCcEEEEEEcCCCCEEEEEcC--CCcEEEEEeecc
Q psy10867        220 --------------------------------LLSLI-------LDTRLTCVAFDGTEDNIYMGTS--EGVIKSFCLRQV  258 (343)
Q Consensus       220 --------------------------------~~~~~-------~~~~i~~~~~~~~~~~l~~~~~--d~~i~i~d~~~~  258 (343)
                                                      +..++       ....+.-++|++|..++++-..  -+.+.+||++..
T Consensus       273 ~~~cLsf~p~~~~a~~~~~se~~YE~~~~pv~~~~lkp~tD~pnPk~g~g~lafs~Ds~y~aTrnd~~PnalW~Wdlq~l  352 (447)
T KOG4497|consen  273 LHHCLSFTPTDLEAHIWEESETIYEQQMTPVKVHKLKPPTDFPNPKCGAGKLAFSCDSTYAATRNDKYPNALWLWDLQNL  352 (447)
T ss_pred             cccccccCCCccccCccccchhhhhhhhcceeeecccCCCCCCCcccccceeeecCCceEEeeecCCCCceEEEEechhh
Confidence                                            00111       0123667899999999998643  467999999875


Q ss_pred             cccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecccCCceEEEEEccCCCeeeec
Q psy10867        259 PRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQHKGPVLGAFLGLLPPAIHDY  338 (343)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~  338 (343)
                      +..            ..-....+|....|+|....|+.+.....+++|...-...+..-...-.|..+.|.-+|..++-.
T Consensus       353 ~l~------------avLiQk~piraf~WdP~~prL~vctg~srLY~W~psg~~~V~vP~~GF~i~~l~W~~~g~~i~l~  420 (447)
T KOG4497|consen  353 KLH------------AVLIQKHPIRAFEWDPGRPRLVVCTGKSRLYFWAPSGPRVVGVPKKGFNIQKLQWLQPGEFIVLC  420 (447)
T ss_pred             hhh------------hhhhhccceeEEEeCCCCceEEEEcCCceEEEEcCCCceEEecCCCCceeeeEEecCCCcEEEEE
Confidence            432            22234568999999999988888887788999998665555555566789999999999887654


Q ss_pred             c
Q psy10867        339 D  339 (343)
Q Consensus       339 ~  339 (343)
                      +
T Consensus       421 ~  421 (447)
T KOG4497|consen  421 G  421 (447)
T ss_pred             c
Confidence            3

>KOG2110|consensus

Probab=99.85  E-value=8.3e-19  Score=134.28  Aligned_cols=222  Identities=12%  Similarity=0.106  Sum_probs=165.1

Q ss_pred             CcceEEEEECCCCCEEEEecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCC--CeEEEeecCccceee
Q psy10867         78 PGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGED--GTICVWQLSRLICKQ  155 (343)
Q Consensus        78 ~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d--g~i~iwd~~~~~~~~  155 (343)
                      ...+..+.|..+...|..|.....++|..+.-............|..+-|+  ..+++..+.+  +.+++.++.....+.
T Consensus         5 ~~ti~~~~~Nqd~~~lsvGs~~Gyk~~~~~~~~k~~~~~~~~~~IvEmLFS--SSLvaiV~~~qpr~Lkv~~~Kk~~~IC   82 (391)
T KOG2110|consen    5 KPTINFIGFNQDSTLLSVGSKDGYKIFSCSPFEKCFSKDTEGVSIVEMLFS--SSLVAIVSIKQPRKLKVVHFKKKTTIC   82 (391)
T ss_pred             CcceeeeeeccceeEEEccCCCceeEEecCchHHhhcccCCCeEEEEeecc--cceeEEEecCCCceEEEEEcccCceEE
Confidence            345677779989988888776678888876554422222223345556665  4455555443  458899988765554


Q ss_pred             eeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeec----CCcEEE
Q psy10867        156 TVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLIL----DTRLTC  231 (343)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~----~~~i~~  231 (343)
                      .+.                       ....|.++.++.+    .|+..-++. |+|||+++.+.+.++..    ...+.+
T Consensus        83 e~~-----------------------fpt~IL~VrmNr~----RLvV~Lee~-IyIydI~~MklLhTI~t~~~n~~gl~A  134 (391)
T KOG2110|consen   83 EIF-----------------------FPTSILAVRMNRK----RLVVCLEES-IYIYDIKDMKLLHTIETTPPNPKGLCA  134 (391)
T ss_pred             EEe-----------------------cCCceEEEEEccc----eEEEEEccc-EEEEecccceeehhhhccCCCccceEe
Confidence            432                       4567888888774    455554444 99999999999988873    334666


Q ss_pred             EEEcCCCCEEEE--EcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCc-EEEEec
Q psy10867        232 VAFDGTEDNIYM--GTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADET-LKIWHT  308 (343)
Q Consensus       232 ~~~~~~~~~l~~--~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~-i~iwd~  308 (343)
                      +.+++.+.+++.  ....|.|.+||+.+...           +..+..|++.+-+++|+++|.+||++|..|+ |||+.+
T Consensus       135 lS~n~~n~ylAyp~s~t~GdV~l~d~~nl~~-----------v~~I~aH~~~lAalafs~~G~llATASeKGTVIRVf~v  203 (391)
T KOG2110|consen  135 LSPNNANCYLAYPGSTTSGDVVLFDTINLQP-----------VNTINAHKGPLAALAFSPDGTLLATASEKGTVIRVFSV  203 (391)
T ss_pred             eccCCCCceEEecCCCCCceEEEEEccccee-----------eeEEEecCCceeEEEECCCCCEEEEeccCceEEEEEEc
Confidence            666666778887  34578999999987543           5667899999999999999999999999996 699999


Q ss_pred             ccceeeeecc---cCCceEEEEEccCCCeeeeccc
Q psy10867        309 ISRQCLRTIQ---HKGPVLGAFLGLLPPAIHDYDF  340 (343)
Q Consensus       309 ~~~~~~~~~~---~~~~v~~~~~sp~~~~l~~~~~  340 (343)
                      .+|+.+.+|+   ....|.+++|+|++++|.+.+-
T Consensus       204 ~~G~kl~eFRRG~~~~~IySL~Fs~ds~~L~~sS~  238 (391)
T KOG2110|consen  204 PEGQKLYEFRRGTYPVSIYSLSFSPDSQFLAASSN  238 (391)
T ss_pred             CCccEeeeeeCCceeeEEEEEEECCCCCeEEEecC
Confidence            9999999998   4456889999999999988764

>KOG1272|consensus

Probab=99.85  E-value=6.7e-21  Score=149.74  Aligned_cols=259  Identities=13%  Similarity=0.116  Sum_probs=205.4

Q ss_pred             cceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEEecCCeEEEEEccCCceEEEecc
Q psy10867         38 SPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASS  117 (343)
Q Consensus        38 ~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~~  117 (343)
                      ....+.++.+|+.+..|+..|.+..+|..+++....+ .-...|.++.|..+.+++|+.....++||| ..|..++.++.
T Consensus       131 GPY~~~ytrnGrhlllgGrKGHlAa~Dw~t~~L~~Ei-~v~Etv~Dv~~LHneq~~AVAQK~y~yvYD-~~GtElHClk~  208 (545)
T KOG1272|consen  131 GPYHLDYTRNGRHLLLGGRKGHLAAFDWVTKKLHFEI-NVMETVRDVTFLHNEQFFAVAQKKYVYVYD-NNGTELHCLKR  208 (545)
T ss_pred             CCeeeeecCCccEEEecCCccceeeeecccceeeeee-ehhhhhhhhhhhcchHHHHhhhhceEEEec-CCCcEEeehhh
Confidence            6788999999988888888899999999998876544 445689999999999999999999999999 57888888887


Q ss_pred             cCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCc
Q psy10867        118 HYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAK  197 (343)
Q Consensus       118 ~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  197 (343)
                      | ..|..+.|.|..-+|++++..|.++--|+.+++.+.                      .+....+.+..++-+|-+  
T Consensus       209 ~-~~v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~GklVa----------------------~~~t~~G~~~vm~qNP~N--  263 (545)
T KOG1272|consen  209 H-IRVARLEFLPYHFLLVAASEAGFLKYQDVSTGKLVA----------------------SIRTGAGRTDVMKQNPYN--  263 (545)
T ss_pred             c-CchhhhcccchhheeeecccCCceEEEeechhhhhH----------------------HHHccCCccchhhcCCcc--
Confidence            6 458999999999999999999999999999986543                      334566778888889987  


Q ss_pred             eEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccc
Q psy10867        198 SRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFI  276 (343)
Q Consensus       198 ~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~  276 (343)
                      ..+-+|...|+|.+|.....+++..+. |.++|.++++.++|.|+++.+.|..++|||++....+..           +.
T Consensus       264 aVih~GhsnGtVSlWSP~skePLvKiLcH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t-----------~~  332 (545)
T KOG1272|consen  264 AVIHLGHSNGTVSLWSPNSKEPLVKILCHRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQLHT-----------YR  332 (545)
T ss_pred             ceEEEcCCCceEEecCCCCcchHHHHHhcCCCcceEEECCCCcEEeecccccceeEeeeccccccce-----------ee
Confidence            788999999999999998888776655 899999999999999999999999999999998764332           22


Q ss_pred             cccCcEEEEEEccCCCEEEEEeCCCcEEEEec-ccce---eeeecc--cCCceEEEEEccCCCeeee
Q psy10867        277 GHEKQVTSLSCSITGITLLSSSADETLKIWHT-ISRQ---CLRTIQ--HKGPVLGAFLGLLPPAIHD  337 (343)
Q Consensus       277 ~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~-~~~~---~~~~~~--~~~~v~~~~~sp~~~~l~~  337 (343)
                      . ..+...+++|..| .||. +....|.||.= -.+.   ...-+.  ..++|..+.|.|-...|-.
T Consensus       333 t-p~~a~~ls~Sqkg-lLA~-~~G~~v~iw~d~~~~s~~~~~pYm~H~~~~~V~~l~FcP~EDvLGI  396 (545)
T KOG1272|consen  333 T-PHPASNLSLSQKG-LLAL-SYGDHVQIWKDALKGSGHGETPYMNHRCGGPVEDLRFCPYEDVLGI  396 (545)
T ss_pred             c-CCCcccccccccc-ceee-ecCCeeeeehhhhcCCCCCCcchhhhccCcccccceeccHHHeeec
Confidence            1 2456678888665 3443 44458999952 2211   111122  4568999999987665543

>PRK03629 tolB translocation protein TolB; Provisional

Probab=99.84  E-value=4.3e-18  Score=143.39  Aligned_cols=232  Identities=13%  Similarity=0.038  Sum_probs=156.4

Q ss_pred             eEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-e---cCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEE
Q psy10867         59 MIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-S---IETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFI  134 (343)
Q Consensus        59 ~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~---~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  134 (343)
                      .|.++|.+...... +..+...+...+|+|||+.|+. +   .+..|++|++.+++.... ....+.+..+.|+|||+.|
T Consensus       180 ~l~~~d~dg~~~~~-lt~~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~l-~~~~~~~~~~~~SPDG~~L  257 (429)
T PRK03629        180 ELRVSDYDGYNQFV-VHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQV-ASFPRHNGAPAFSPDGSKL  257 (429)
T ss_pred             eEEEEcCCCCCCEE-eecCCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeEEc-cCCCCCcCCeEECCCCCEE
Confidence            68889987665443 3355678999999999998885 3   234799999988864332 2233345578999999988


Q ss_pred             EEe-cCCC--eEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeC-CC--e
Q psy10867        135 VTG-GEDG--TICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSH-DR--T  208 (343)
Q Consensus       135 ~s~-~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~-d~--~  208 (343)
                      +.. +.+|  .|.+||+.++..                       ..+..+...+....|+|++  +.|+..+. ++  .
T Consensus       258 a~~~~~~g~~~I~~~d~~tg~~-----------------------~~lt~~~~~~~~~~wSPDG--~~I~f~s~~~g~~~  312 (429)
T PRK03629        258 AFALSKTGSLNLYVMDLASGQI-----------------------RQVTDGRSNNTEPTWFPDS--QNLAYTSDQAGRPQ  312 (429)
T ss_pred             EEEEcCCCCcEEEEEECCCCCE-----------------------EEccCCCCCcCceEECCCC--CEEEEEeCCCCCce
Confidence            764 4444  588899987532                       2223344567789999999  66665554 34  4


Q ss_pred             EEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcCC---CcEEEEEeecccccccccccCCCCCCccccccCcEEEE
Q psy10867        209 CKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSE---GVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSL  285 (343)
Q Consensus       209 i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d---~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  285 (343)
                      |.++|+.+++...............|+|+|++|+..+.+   ..|.+||+.+.....            +.. .......
T Consensus       313 Iy~~d~~~g~~~~lt~~~~~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~~~~------------Lt~-~~~~~~p  379 (429)
T PRK03629        313 VYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQV------------LTD-TFLDETP  379 (429)
T ss_pred             EEEEECCCCCeEEeecCCCCccCEEECCCCCEEEEEEccCCCceEEEEECCCCCeEE------------eCC-CCCCCCc
Confidence            555577666543332234446678999999998876543   357888886643211            111 1122357


Q ss_pred             EEccCCCEEEEEeCCCc---EEEEecccceeeeecc-cCCceEEEEEccC
Q psy10867        286 SCSITGITLLSSSADET---LKIWHTISRQCLRTIQ-HKGPVLGAFLGLL  331 (343)
Q Consensus       286 ~~s~~~~~l~s~~~dg~---i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~  331 (343)
                      .|+|||++|+.++.++.   +.++++ +|+....+. +.+.+...+|+|-
T Consensus       380 ~~SpDG~~i~~~s~~~~~~~l~~~~~-~G~~~~~l~~~~~~~~~p~Wsp~  428 (429)
T PRK03629        380 SIAPNGTMVIYSSSQGMGSVLNLVST-DGRFKARLPATDGQVKFPAWSPY  428 (429)
T ss_pred             eECCCCCEEEEEEcCCCceEEEEEEC-CCCCeEECccCCCCcCCcccCCC
Confidence            89999999998887764   667776 566666666 7788999999973

>KOG1523|consensus

Probab=99.84  E-value=8.3e-19  Score=131.81  Aligned_cols=208  Identities=14%  Similarity=0.134  Sum_probs=167.1

Q ss_pred             EecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcc---cceecccCCcceEEEEECCCCCEEEE-ecCCeEEEEEc
Q psy10867         31 YKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQE---KAQLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQI  106 (343)
Q Consensus        31 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~---~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~  106 (343)
                      +..-.. +|+|.+|++|+..+|.+-....+.||.....+   ..+++..|...|+.+.|+|..+.|++ +.|..-++|..
T Consensus         6 ~~~~~~-pitchAwn~drt~iAv~~~~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~   84 (361)
T KOG1523|consen    6 FHRLLE-PITCHAWNSDRTQIAVSPNNHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQ   84 (361)
T ss_pred             eeeccC-ceeeeeecCCCceEEeccCCceEEEEEecCCCCceeceehhhhCcceeEEeecCCCCceeEccCCCCcccccc
Confidence            333445 89999999999999999888899999887665   34778899999999999999987886 78999999998


Q ss_pred             cC-C--ceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccc
Q psy10867        107 SS-G--RLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHS  183 (343)
Q Consensus       107 ~~-~--~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (343)
                      .+ +  ++...+..++...+++.|+|.++.|++|+....|.+|-++....-.                  -..+..+.+.
T Consensus        85 ~~~~~WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E~ENdWW------------------VsKhikkPir  146 (361)
T KOG1523|consen   85 PSGGTWKPTLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYYEQENDWW------------------VSKHIKKPIR  146 (361)
T ss_pred             CCCCeeccceeEEEeccceeeEeecCcCceEEeccCccEEEEEEEeccccee------------------hhhhhCCccc
Confidence            44 3  3344556788999999999999999999999999999887643221                  1223445577


Q ss_pred             cceEEEEeecCCCceEEEEeeCCCeEEEEecC-----C-------------CceEEEe-ecCCcEEEEEEcCCCCEEEEE
Q psy10867        184 LPVTHVTLSKLGAKSRVASVSHDRTCKIFDLC-----T-------------GEDLLSL-ILDTRLTCVAFDGTEDNIYMG  244 (343)
Q Consensus       184 ~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~-----~-------------~~~~~~~-~~~~~i~~~~~~~~~~~l~~~  244 (343)
                      ..|.++.|+|++  -++++|+.|+.++++..-     +             |+.+.++ ...+.+..+.|+|+|..|+-.
T Consensus       147 Stv~sldWhpnn--VLlaaGs~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwvh~v~fs~sG~~lawv  224 (361)
T KOG1523|consen  147 STVTSLDWHPNN--VLLAAGSTDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWVHGVLFSPSGNRLAWV  224 (361)
T ss_pred             cceeeeeccCCc--ceecccccCcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhccCCCceeeeEeCCCCCEeeEe
Confidence            889999999998  899999999999998642     1             2233334 346679999999999999999


Q ss_pred             cCCCcEEEEEeeccc
Q psy10867        245 TSEGVIKSFCLRQVP  259 (343)
Q Consensus       245 ~~d~~i~i~d~~~~~  259 (343)
                      +.|..+.+-|.....
T Consensus       225 ~Hds~v~~~da~~p~  239 (361)
T KOG1523|consen  225 GHDSTVSFVDAAGPS  239 (361)
T ss_pred             cCCCceEEeecCCCc
Confidence            999999999987654

>KOG1517|consensus

Probab=99.84  E-value=1.3e-18  Score=149.99  Aligned_cols=269  Identities=15%  Similarity=0.199  Sum_probs=189.2

Q ss_pred             cceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceeccc---CCcceEEEEECC--CCC-EEEEecCCeEEEEEccCC--
Q psy10867         38 SPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLI---CPGRISSMQASP--DAA-YIAVSIETKLHMWQISSG--  109 (343)
Q Consensus        38 ~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~---~~~~v~~~~~s~--~~~-~l~~~~d~~i~v~~~~~~--  109 (343)
                      +...+.|+|-...++++++.-.|++||.+.++....+..   ....|+.+.+-.  |.. +|+++.||.|+||+--..  
T Consensus      1066 ~pk~~~~hpf~p~i~~ad~r~~i~vwd~e~~~~l~~F~n~~~~~t~Vs~l~liNe~D~aLlLtas~dGvIRIwk~y~~~~ 1145 (1387)
T KOG1517|consen 1066 PPKTLKFHPFEPQIAAADDRERIRVWDWEKGRLLNGFDNGAFPDTRVSDLELINEQDDALLLTASSDGVIRIWKDYADKW 1145 (1387)
T ss_pred             CCceeeecCCCceeEEcCCcceEEEEecccCceeccccCCCCCCCccceeeeecccchhheeeeccCceEEEeccccccc
Confidence            567888999888888888668999999999888755442   345688888864  233 445589999999974221  


Q ss_pred             ---ceEEEec-------ccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeee
Q psy10867        110 ---RLLATAS-------SHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVK  179 (343)
Q Consensus       110 ---~~~~~~~-------~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (343)
                         +.+....       +..+.=.-+.|.....+|++++.-..|+|||.........+.                     
T Consensus      1146 ~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G~Ll~tGd~r~IRIWDa~~E~~~~diP--------------------- 1204 (1387)
T KOG1517|consen 1146 KKPELVTAWSSLSDQLPGARGTGLVVDWQQQSGHLLVTGDVRSIRIWDAHKEQVVADIP--------------------- 1204 (1387)
T ss_pred             CCceeEEeeccccccCccCCCCCeeeehhhhCCeEEecCCeeEEEEEecccceeEeecc---------------------
Confidence               2222221       111222346777766666676767899999999876554432                     


Q ss_pred             cccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCce---EEEee-cCCc--EEEEEEcCCCC-EEEEEcCCCcEEE
Q psy10867        180 SQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGED---LLSLI-LDTR--LTCVAFDGTED-NIYMGTSEGVIKS  252 (343)
Q Consensus       180 ~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~---~~~~~-~~~~--i~~~~~~~~~~-~l~~~~~d~~i~i  252 (343)
                      .+....|+++.-+... ++.+++|..||.+++||.+....   +..++ |...  |..+.+.+.|- .|++|+.+|.|++
T Consensus      1205 ~~s~t~vTaLS~~~~~-gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~ 1283 (1387)
T KOG1517|consen 1205 YGSSTLVTALSADLVH-GNIIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQL 1283 (1387)
T ss_pred             cCCCccceeecccccC-CceEEEeecCCceEEeecccCCccccceeecccCCcccceeEEeecCCCcceeeeccCCeEEE
Confidence            2344556666655433 27999999999999999986543   33333 4444  99999999775 4999999999999


Q ss_pred             EEeecccccccccccCCCCCCcccccc---CcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc--------cCC
Q psy10867        253 FCLRQVPRTRDHHIQDSTSNPDFIGHE---KQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ--------HKG  321 (343)
Q Consensus       253 ~d~~~~~~~~~~~~~~~~~~~~~~~~~---~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~--------~~~  321 (343)
                      ||++......         ......|-   +..+++..+++...+|+|+. +.|+||++ .|+.+..++        ..+
T Consensus      1284 ~DlR~~~~e~---------~~~iv~~~~yGs~lTal~VH~hapiiAsGs~-q~ikIy~~-~G~~l~~~k~n~~F~~q~~g 1352 (1387)
T KOG1517|consen 1284 LDLRMSSKET---------FLTIVAHWEYGSALTALTVHEHAPIIASGSA-QLIKIYSL-SGEQLNIIKYNPGFMGQRIG 1352 (1387)
T ss_pred             EecccCcccc---------cceeeeccccCccceeeeeccCCCeeeecCc-ceEEEEec-ChhhhcccccCcccccCcCC
Confidence            9999742211         11222222   25899999999999999998 89999997 455555544        346


Q ss_pred             ceEEEEEccCCCeeeecc
Q psy10867        322 PVLGAFLGLLPPAIHDYD  339 (343)
Q Consensus       322 ~v~~~~~sp~~~~l~~~~  339 (343)
                      .+.+++|+|-.-.|++++
T Consensus      1353 s~scL~FHP~~~llAaG~ 1370 (1387)
T KOG1517|consen 1353 SVSCLAFHPHRLLLAAGS 1370 (1387)
T ss_pred             CcceeeecchhHhhhhcc
Confidence            789999999877777663

>PRK04922 tolB translocation protein TolB; Provisional

Probab=99.84  E-value=3.9e-18  Score=144.29  Aligned_cols=232  Identities=17%  Similarity=0.059  Sum_probs=155.3

Q ss_pred             CeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-ec---CCeEEEEEccCCceEEEecccCCCeEEEEEecCCCE
Q psy10867         58 PMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SI---ETKLHMWQISSGRLLATASSHYQPITIVKWSADSNF  133 (343)
Q Consensus        58 ~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~---d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  133 (343)
                      ..|.+||...... +.+..+...+...+|+|||+.|+. +.   ...|++||+.+++... +..+.+...+..|+|||+.
T Consensus       184 ~~l~i~D~~g~~~-~~lt~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~~-l~~~~g~~~~~~~SpDG~~  261 (433)
T PRK04922        184 YALQVADSDGYNP-QTILRSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQREL-VASFRGINGAPSFSPDGRR  261 (433)
T ss_pred             EEEEEECCCCCCc-eEeecCCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEEE-eccCCCCccCceECCCCCE
Confidence            3688999865443 334466778999999999998885 32   3479999998886543 3334455567899999997


Q ss_pred             EE-EecCCC--eEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEee-CCCe-
Q psy10867        134 IV-TGGEDG--TICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVS-HDRT-  208 (343)
Q Consensus       134 l~-s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~-~d~~-  208 (343)
                      |+ +.+.+|  .|.+||+.++..                       ..+..+.......+|+|++  +.++..+ .+|. 
T Consensus       262 l~~~~s~~g~~~Iy~~d~~~g~~-----------------------~~lt~~~~~~~~~~~spDG--~~l~f~sd~~g~~  316 (433)
T PRK04922        262 LALTLSRDGNPEIYVMDLGSRQL-----------------------TRLTNHFGIDTEPTWAPDG--KSIYFTSDRGGRP  316 (433)
T ss_pred             EEEEEeCCCCceEEEEECCCCCe-----------------------EECccCCCCccceEECCCC--CEEEEEECCCCCc
Confidence            75 445555  599999987632                       2233344455678999999  6666555 3444 


Q ss_pred             -EEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcCCC---cEEEEEeecccccccccccCCCCCCccccccCcEEE
Q psy10867        209 -CKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEG---VIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTS  284 (343)
Q Consensus       209 -i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~---~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  284 (343)
                       |+++|+.+++..............+|+|+|++++..+.++   .|.+||+.+....            .+. +......
T Consensus       317 ~iy~~dl~~g~~~~lt~~g~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~~~------------~Lt-~~~~~~~  383 (433)
T PRK04922        317 QIYRVAASGGSAERLTFQGNYNARASVSPDGKKIAMVHGSGGQYRIAVMDLSTGSVR------------TLT-PGSLDES  383 (433)
T ss_pred             eEEEEECCCCCeEEeecCCCCccCEEECCCCCEEEEEECCCCceeEEEEECCCCCeE------------ECC-CCCCCCC
Confidence             7777777766433322334455789999999998765433   6889998664321            111 1122345


Q ss_pred             EEEccCCCEEEEEeCC---CcEEEEecccceeeeecc-cCCceEEEEEcc
Q psy10867        285 LSCSITGITLLSSSAD---ETLKIWHTISRQCLRTIQ-HKGPVLGAFLGL  330 (343)
Q Consensus       285 ~~~s~~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp  330 (343)
                      ..|+|||++|+..+.+   +.|.++++. +.....+. +.+.+...+|+|
T Consensus       384 p~~spdG~~i~~~s~~~g~~~L~~~~~~-g~~~~~l~~~~g~~~~p~wsp  432 (433)
T PRK04922        384 PSFAPNGSMVLYATREGGRGVLAAVSTD-GRVRQRLVSADGEVREPAWSP  432 (433)
T ss_pred             ceECCCCCEEEEEEecCCceEEEEEECC-CCceEEcccCCCCCCCCccCC
Confidence            6899999988766653   357888874 44555555 567788888887

>PRK03629 tolB translocation protein TolB; Provisional

Probab=99.83  E-value=6.3e-18  Score=142.38  Aligned_cols=233  Identities=15%  Similarity=0.095  Sum_probs=155.3

Q ss_pred             CeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEc---CCCeEEEEeCCCcccceecccCCcceEEEEECCCCC
Q psy10867         15 GAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEK---GKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAA   91 (343)
Q Consensus        15 g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~---~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~   91 (343)
                      ..|.+||...... +.+..+.. .+.+.+|+|||+.++..+   .+..+.+|++.+++..... ...+.+..++|+|||+
T Consensus       179 ~~l~~~d~dg~~~-~~lt~~~~-~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~l~-~~~~~~~~~~~SPDG~  255 (429)
T PRK03629        179 YELRVSDYDGYNQ-FVVHRSPQ-PLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVA-SFPRHNGAPAFSPDGS  255 (429)
T ss_pred             eeEEEEcCCCCCC-EEeecCCC-ceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeEEcc-CCCCCcCCeEECCCCC
Confidence            3789999865443 33444555 889999999997776532   2357999999887644322 3334456789999999


Q ss_pred             EEEE--ecCC--eEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCC-CeEEEe--ecCccceeeeeecCCCCC
Q psy10867         92 YIAV--SIET--KLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGED-GTICVW--QLSRLICKQTVAFGIPGS  164 (343)
Q Consensus        92 ~l~~--~~d~--~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-g~i~iw--d~~~~~~~~~~~~~~~~~  164 (343)
                      .|+.  ..++  .|++||+++++.... ..+...+....|+||++.|+..+.+ +...+|  |+.++..           
T Consensus       256 ~La~~~~~~g~~~I~~~d~~tg~~~~l-t~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~~-----------  323 (429)
T PRK03629        256 KLAFALSKTGSLNLYVMDLASGQIRQV-TDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGAP-----------  323 (429)
T ss_pred             EEEEEEcCCCCcEEEEEECCCCCEEEc-cCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCCe-----------
Confidence            8885  2334  699999988876544 3444567889999999988776653 444444  5554421           


Q ss_pred             CCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCC---CeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEE
Q psy10867        165 SGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHD---RTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNI  241 (343)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d---~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l  241 (343)
                                  ..+..+........|+|++  ++++..+.+   ..|.+||+.+++.. .+..........|+|||+.|
T Consensus       324 ------------~~lt~~~~~~~~~~~SpDG--~~Ia~~~~~~g~~~I~~~dl~~g~~~-~Lt~~~~~~~p~~SpDG~~i  388 (429)
T PRK03629        324 ------------QRITWEGSQNQDADVSSDG--KFMVMVSSNGGQQHIAKQDLATGGVQ-VLTDTFLDETPSIAPNGTMV  388 (429)
T ss_pred             ------------EEeecCCCCccCEEECCCC--CEEEEEEccCCCceEEEEECCCCCeE-EeCCCCCCCCceECCCCCEE
Confidence                        1222233445678899999  666655433   45888999887643 33322234567899999999


Q ss_pred             EEEcCCCc---EEEEEeecccccccccccCCCCCCccccccCcEEEEEEcc
Q psy10867        242 YMGTSEGV---IKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSI  289 (343)
Q Consensus       242 ~~~~~d~~---i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~  289 (343)
                      +.++.++.   +.++++....            ...+.+|.+.+...+|+|
T Consensus       389 ~~~s~~~~~~~l~~~~~~G~~------------~~~l~~~~~~~~~p~Wsp  427 (429)
T PRK03629        389 IYSSSQGMGSVLNLVSTDGRF------------KARLPATDGQVKFPAWSP  427 (429)
T ss_pred             EEEEcCCCceEEEEEECCCCC------------eEECccCCCCcCCcccCC
Confidence            99887764   5566654321            334556777888888887

>PRK05137 tolB translocation protein TolB; Provisional

Probab=99.83  E-value=9.7e-18  Score=142.12  Aligned_cols=233  Identities=12%  Similarity=0.031  Sum_probs=157.6

Q ss_pred             CeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-e---cCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCE
Q psy10867         58 PMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-S---IETKLHMWQISSGRLLATASSHYQPITIVKWSADSNF  133 (343)
Q Consensus        58 ~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~---~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  133 (343)
                      ..|.++|.+.... +.+..+...+...+|+|||+.|+. +   .+..|++||+.+++.. .+..+.+.+....|+|||+.
T Consensus       182 ~~l~~~d~dg~~~-~~lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~-~l~~~~g~~~~~~~SPDG~~  259 (435)
T PRK05137        182 KRLAIMDQDGANV-RYLTDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQRE-LVGNFPGMTFAPRFSPDGRK  259 (435)
T ss_pred             eEEEEECCCCCCc-EEEecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEE-EeecCCCcccCcEECCCCCE
Confidence            3788888865543 445567788999999999998885 3   2458999999888653 44456667788999999997


Q ss_pred             EE-EecCCCe--EEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeC-C--C
Q psy10867        134 IV-TGGEDGT--ICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSH-D--R  207 (343)
Q Consensus       134 l~-s~~~dg~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~-d--~  207 (343)
                      |+ +.+.++.  |.+||+.++.                       ...+..+........|+|++  +.++..+. +  .
T Consensus       260 la~~~~~~g~~~Iy~~d~~~~~-----------------------~~~Lt~~~~~~~~~~~spDG--~~i~f~s~~~g~~  314 (435)
T PRK05137        260 VVMSLSQGGNTDIYTMDLRSGT-----------------------TTRLTDSPAIDTSPSYSPDG--SQIVFESDRSGSP  314 (435)
T ss_pred             EEEEEecCCCceEEEEECCCCc-----------------------eEEccCCCCccCceeEcCCC--CEEEEEECCCCCC
Confidence            75 4555554  7777887652                       23334455556778999999  66665553 3  3


Q ss_pred             eEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcCC---CcEEEEEeecccccccccccCCCCCCccccccCcEEE
Q psy10867        208 TCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSE---GVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTS  284 (343)
Q Consensus       208 ~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d---~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  284 (343)
                      .|+++|+..++..........+....|+|+|++|+....+   ..|.+||+..... .           .+. ....+..
T Consensus       315 ~Iy~~d~~g~~~~~lt~~~~~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~~~~~-~-----------~lt-~~~~~~~  381 (435)
T PRK05137        315 QLYVMNADGSNPRRISFGGGRYSTPVWSPRGDLIAFTKQGGGQFSIGVMKPDGSGE-R-----------ILT-SGFLVEG  381 (435)
T ss_pred             eEEEEECCCCCeEEeecCCCcccCeEECCCCCEEEEEEcCCCceEEEEEECCCCce-E-----------ecc-CCCCCCC
Confidence            6888898766554433345557778999999999886543   3577777654321 1           111 1123567


Q ss_pred             EEEccCCCEEEEEeCC------CcEEEEecccceeeeecccCCceEEEEEccC
Q psy10867        285 LSCSITGITLLSSSAD------ETLKIWHTISRQCLRTIQHKGPVLGAFLGLL  331 (343)
Q Consensus       285 ~~~s~~~~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~  331 (343)
                      +.|+|||+.|+..+.+      ..++++|+..++. ..+...+.+...+|+|-
T Consensus       382 p~~spDG~~i~~~~~~~~~~~~~~L~~~dl~g~~~-~~l~~~~~~~~p~Wsp~  433 (435)
T PRK05137        382 PTWAPNGRVIMFFRQTPGSGGAPKLYTVDLTGRNE-REVPTPGDASDPAWSPL  433 (435)
T ss_pred             CeECCCCCEEEEEEccCCCCCcceEEEEECCCCce-EEccCCCCccCcccCCC
Confidence            8999999988765443      2577888765544 45544556778888874

>KOG0644|consensus

Probab=99.82  E-value=9.3e-20  Score=153.18  Aligned_cols=263  Identities=16%  Similarity=0.216  Sum_probs=205.2

Q ss_pred             eEEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEE
Q psy10867          6 EVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQ   85 (343)
Q Consensus         6 ~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~   85 (343)
                      ..+|+++.|..++||..+++.++....||.+ .++.++.+.+..++++++.|..|++|.+..+..+..+.+|++.|++++
T Consensus       203 ~~Iitgsdd~lvKiwS~et~~~lAs~rGhs~-ditdlavs~~n~~iaaaS~D~vIrvWrl~~~~pvsvLrghtgavtaia  281 (1113)
T KOG0644|consen  203 RYIITGSDDRLVKIWSMETARCLASCRGHSG-DITDLAVSSNNTMIAAASNDKVIRVWRLPDGAPVSVLRGHTGAVTAIA  281 (1113)
T ss_pred             ceEeecCccceeeeeeccchhhhccCCCCcc-ccchhccchhhhhhhhcccCceEEEEecCCCchHHHHhccccceeeec
Confidence            3467788899999999999999999999999 999999999999999999999999999999999999999999999999


Q ss_pred             ECCCCCEEEEecCCeEEEEEccCCceEEEe----c-ccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecC
Q psy10867         86 ASPDAAYIAVSIETKLHMWQISSGRLLATA----S-SHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFG  160 (343)
Q Consensus        86 ~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~----~-~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~  160 (343)
                      |+|-.   +++.||++++||.+- ......    + ....-+.++.|..++..+++++.|+.-..|......        
T Consensus       282 fsP~~---sss~dgt~~~wd~r~-~~~~y~prp~~~~~~~~~~s~~~~~~~~~f~Tgs~d~ea~n~e~~~l~--------  349 (1113)
T KOG0644|consen  282 FSPRA---SSSDDGTCRIWDARL-EPRIYVPRPLKFTEKDLVDSILFENNGDRFLTGSRDGEARNHEFEQLA--------  349 (1113)
T ss_pred             cCccc---cCCCCCceEeccccc-cccccCCCCCCcccccceeeeeccccccccccccCCcccccchhhHhh--------
Confidence            99965   567899999999871 111111    0 123456677888888999999999999888775432        


Q ss_pred             CCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCC
Q psy10867        161 IPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTED  239 (343)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~  239 (343)
                                          .+...+.-+..+.+.. .+.+++-.+-.+.+|++.+|....... |...+..+.++|-+.
T Consensus       350 --------------------~~~~~lif~t~ssd~~-~~~~~ar~~~~~~vwnl~~g~l~H~l~ghsd~~yvLd~Hpfn~  408 (1113)
T KOG0644|consen  350 --------------------WRSNLLIFVTRSSDLS-SIVVTARNDHRLCVWNLYTGQLLHNLMGHSDEVYVLDVHPFNP  408 (1113)
T ss_pred             --------------------hhccceEEEecccccc-ccceeeeeeeEeeeeecccchhhhhhcccccceeeeeecCCCc
Confidence                                1222222333332322 467777888899999999998777665 677899999999665


Q ss_pred             E-EEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEeccccee
Q psy10867        240 N-IYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQC  313 (343)
Q Consensus       240 ~-l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~  313 (343)
                      . ..+++.||...|||+-.+...+.+          +.+| ..+...+||+||..++....-|.++|.....++.
T Consensus       409 ri~msag~dgst~iwdi~eg~pik~y----------~~gh-~kl~d~kFSqdgts~~lsd~hgql~i~g~gqs~s  472 (1113)
T KOG0644|consen  409 RIAMSAGYDGSTIIWDIWEGIPIKHY----------FIGH-GKLVDGKFSQDGTSIALSDDHGQLYILGTGQSKS  472 (1113)
T ss_pred             HhhhhccCCCceEeeecccCCcceee----------eccc-ceeeccccCCCCceEecCCCCCceEEeccCCCcc
Confidence            5 456889999999999876554433          1333 4566679999999999888889999988655443

>KOG3881|consensus

Probab=99.82  E-value=6.8e-18  Score=130.25  Aligned_cols=271  Identities=15%  Similarity=0.192  Sum_probs=194.7

Q ss_pred             cceEEEEeCCc--eEEEEEcCCCeEEEEeCCCccccee------cccCCcceEEEEECCCCCEEEEecCCeEEEEEccCC
Q psy10867         38 SPHSMCLLGND--YVLGVEKGKPMIQAWPVNSQEKAQL------RLICPGRISSMQASPDAAYIAVSIETKLHMWQISSG  109 (343)
Q Consensus        38 ~v~~~~~~~~~--~~~~~~~~~~~i~iw~~~~~~~~~~------~~~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~  109 (343)
                      .+..++|.-++  .++.....+-.+..+..........      ......+|..++.. |+.++++-.+|.+.+|....+
T Consensus        57 ris~l~~~~d~~tevl~~r~~~~~~~~~~~~E~~~~s~~~~~~~~~l~~~~I~gl~~~-dg~Litc~~sG~l~~~~~k~~  135 (412)
T KOG3881|consen   57 RISSLLFGVDGETEVLNARSADDDLPKFVIEEFEISSSLDDAKTVSLGTKSIKGLKLA-DGTLITCVSSGNLQVRHDKSG  135 (412)
T ss_pred             hhhhheeecCCceeEeeccccCcccccccccCCccccccccccccccccccccchhhc-CCEEEEEecCCcEEEEeccCC
Confidence            67777777443  5555554445667666665554432      22445667777665 777888888999999998844


Q ss_pred             c----eEEEecccCCCeEEEEEecCC-CEEEEecCC--CeEEEeecCccceeeeeecCCCCCCCCccccccceeeeeccc
Q psy10867        110 R----LLATASSHYQPITIVKWSADS-NFIVTGGED--GTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQH  182 (343)
Q Consensus       110 ~----~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~d--g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (343)
                      .    .+..+..+ ..+..+.-++.. ..+++|+..  ..+++||+...+.+..-....+           ..+.  -.-
T Consensus       136 d~hss~l~~la~g-~g~~~~r~~~~~p~Iva~GGke~~n~lkiwdle~~~qiw~aKNvpn-----------D~L~--LrV  201 (412)
T KOG3881|consen  136 DLHSSKLIKLATG-PGLYDVRQTDTDPYIVATGGKENINELKIWDLEQSKQIWSAKNVPN-----------DRLG--LRV  201 (412)
T ss_pred             ccccccceeeecC-CceeeeccCCCCCceEecCchhcccceeeeecccceeeeeccCCCC-----------cccc--cee
Confidence            2    23334333 446677777644 456669988  8899999998744433210000           0000  001


Q ss_pred             ccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCc-eEEEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccc
Q psy10867        183 SLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGE-DLLSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPR  260 (343)
Q Consensus       183 ~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~-~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~  260 (343)
                      .-.++++.|.+..+...|++++.-+.+++||.+.++ ++..+. .+.+++++...|.++++++|..-+.+..||++....
T Consensus       202 PvW~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qRRPV~~fd~~E~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~kl  281 (412)
T KOG3881|consen  202 PVWITDIRFLEGSPNYKFATITRYHQVRLYDTRHQRRPVAQFDFLENPISSTGLTPSGNFIYTGNTKGQLAKFDLRGGKL  281 (412)
T ss_pred             eeeeccceecCCCCCceEEEEecceeEEEecCcccCcceeEeccccCcceeeeecCCCcEEEEecccchhheecccCcee
Confidence            235678888887333899999999999999998664 566666 578899999999999999999999999999998654


Q ss_pred             cccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecccCCceEEEEEccCCC
Q psy10867        261 TRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQHKGPVLGAFLGLLPP  333 (343)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~  333 (343)
                      .          ...+.+-.+.|+++..+|.++++|+++-|..|||+|+++.+++...-....++++.+.++-.
T Consensus       282 ~----------g~~~kg~tGsirsih~hp~~~~las~GLDRyvRIhD~ktrkll~kvYvKs~lt~il~~~~~n  344 (412)
T KOG3881|consen  282 L----------GCGLKGITGSIRSIHCHPTHPVLASCGLDRYVRIHDIKTRKLLHKVYVKSRLTFILLRDDVN  344 (412)
T ss_pred             e----------ccccCCccCCcceEEEcCCCceEEeeccceeEEEeecccchhhhhhhhhccccEEEecCCcc
Confidence            3          22367788999999999999999999999999999999988877766677788888766543

>KOG2315|consensus

Probab=99.82  E-value=2.9e-17  Score=132.56  Aligned_cols=308  Identities=11%  Similarity=0.125  Sum_probs=197.0

Q ss_pred             CeEEEEecCCceEEE-EEecC--CCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCC
Q psy10867         15 GAISVWEPKGGTLLM-SYKGA--SVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAA   91 (343)
Q Consensus        15 g~i~iwd~~~~~~~~-~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~   91 (343)
                      -.+.+|+....+... .+...  .. .++..+++++|++++.+.+ ..+.|++..++..+....  ...+.++.|+|-+.
T Consensus        11 e~~~l~~~~~~~~~~~~f~~~~~~~-~~~v~~~S~~G~lfA~~~~-~~v~i~~~~~~~~~lt~~--~~~~~~L~fSP~g~   86 (566)
T KOG2315|consen   11 EGFYLFNGPGSKDAVTVFEQNKTSR-PCNVFAYSNNGRLFAYSDN-QVVKVFEIATLKVVLCVE--LKKTYDLLFSPKGN   86 (566)
T ss_pred             ceeEEeccCCccccccccccCCCCC-cceeEEEcCCCcEEEEEcC-CeEEEEEccCCcEEEEec--cceeeeeeeccccc
Confidence            358888865533333 33332  33 5678899999999999998 799999998886433222  22889999999999


Q ss_pred             EEEEe------cC-----CeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeee-ee-
Q psy10867         92 YIAVS------IE-----TKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQT-VA-  158 (343)
Q Consensus        92 ~l~~~------~d-----~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~-~~-  158 (343)
                      +|.+-      .+     -.+.+|+++++.....+......-++..|++|..+.+- -..+.+.+|++........ +. 
T Consensus        87 yL~T~e~~~i~~~~~~~~pn~~v~~vet~~~~s~~q~k~Q~~W~~qfs~dEsl~ar-lv~nev~f~~~~~f~~~~~kl~~  165 (566)
T KOG2315|consen   87 YLLTWEPWAIYGPKNASNPNVLVYNVETGVQRSQIQKKMQNGWVPQFSIDESLAAR-LVSNEVQFYDLGSFKTIQHKLSV  165 (566)
T ss_pred             ccccccccccccCCCCCCCceeeeeeccceehhheehhhhcCcccccccchhhhhh-hhcceEEEEecCCccceeeeeec
Confidence            98861      22     25889999996555444432222268899987664332 3347799999876432211 10 


Q ss_pred             -------cCCCCCCC------Cccccccceeeeeccc--------------ccceEEEEeecCCCceEEEEeeC--C---
Q psy10867        159 -------FGIPGSSG------KGVTGLTEPLHVKSQH--------------SLPVTHVTLSKLGAKSRVASVSH--D---  206 (343)
Q Consensus       159 -------~~~~~~~~------~~~~~~~~~~~~~~~~--------------~~~v~~~~~~~~~~~~~l~~~~~--d---  206 (343)
                             +.......      ....+....++.....              ...=-.+.|++.+. .+|+.++.  |   
T Consensus       166 ~~i~~f~lSpgp~~~~vAvyvPe~kGaPa~vri~~~~~~~~~~~~a~ksFFkadkvqm~WN~~gt-~LLvLastdVDktn  244 (566)
T KOG2315|consen  166 SGITMLSLSPGPEPPFVAVYVPEKKGAPASVRIYKYPEEGQHQPVANKSFFKADKVQMKWNKLGT-ALLVLASTDVDKTN  244 (566)
T ss_pred             cceeeEEecCCCCCceEEEEccCCCCCCcEEEEeccccccccchhhhccccccceeEEEeccCCc-eEEEEEEEeecCCC
Confidence                   00000000      0000111111111110              00112345555554 23333322  2   


Q ss_pred             ------CeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEE--EcCCCcEEEEEeecccccccccccCCCCCCccccc
Q psy10867        207 ------RTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYM--GTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGH  278 (343)
Q Consensus       207 ------~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~--~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~  278 (343)
                            .++++.+++.......+...++|.++.|+|+++.+++  |-.-..+.|||++...            +  +.-.
T Consensus       245 ~SYYGEq~Lyll~t~g~s~~V~L~k~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr~~~------------v--~df~  310 (566)
T KOG2315|consen  245 ASYYGEQTLYLLATQGESVSVPLLKEGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLRGKP------------V--FDFP  310 (566)
T ss_pred             ccccccceEEEEEecCceEEEecCCCCCceEEEECCCCCEEEEEEecccceEEEEcCCCCE------------e--EeCC
Confidence                  3577777664445555556899999999999987665  6678899999988632            2  2234


Q ss_pred             cCcEEEEEEccCCCEEEEEeCC---CcEEEEecccceeeeecccCCceEEEEEccCCCeeeecccCCC
Q psy10867        279 EKQVTSLSCSITGITLLSSSAD---ETLKIWHTISRQCLRTIQHKGPVLGAFLGLLPPAIHDYDFTPK  343 (343)
Q Consensus       279 ~~~v~~~~~s~~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~~~  343 (343)
                      .++-+.+-|+|.|++++.++.+   |.|-|||+.+.+++..+...+ -+-+.|+|||++++++.-.|+
T Consensus       311 egpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~K~i~~~~a~~-tt~~eW~PdGe~flTATTaPR  377 (566)
T KOG2315|consen  311 EGPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVPNRKLIAKFKAAN-TTVFEWSPDGEYFLTATTAPR  377 (566)
T ss_pred             CCCccceEECCCCCEEEEeecCCCCCceEEEeccchhhccccccCC-ceEEEEcCCCcEEEEEecccc
Confidence            6777889999999999987765   789999999999998887433 355799999999999988774

>KOG1310|consensus

Probab=99.82  E-value=1.2e-18  Score=140.25  Aligned_cols=233  Identities=19%  Similarity=0.225  Sum_probs=165.7

Q ss_pred             eecccCCcceEEEEECCCCCEEEEe-cCCeEEEEEccCCceEEEe-cccCCCeEEEEEec--CCCEEEEecCCCeEEEee
Q psy10867         72 QLRLICPGRISSMQASPDAAYIAVS-IETKLHMWQISSGRLLATA-SSHYQPITIVKWSA--DSNFIVTGGEDGTICVWQ  147 (343)
Q Consensus        72 ~~~~~~~~~v~~~~~s~~~~~l~~~-~d~~i~v~~~~~~~~~~~~-~~~~~~v~~~~~~~--~~~~l~s~~~dg~i~iwd  147 (343)
                      +.+.+|.+.|++++|+.+|.+|++| .|-.+.|||.-..+++..+ .+|...|.++.|-|  +.+++++|+.|..|+++|
T Consensus        44 ~eL~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~lfd  123 (758)
T KOG1310|consen   44 AELTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIKLFD  123 (758)
T ss_pred             hhhccccceecceeecCCCCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEeccCcceEEEEe
Confidence            5577999999999999999999985 5679999999887777766 48999999999999  566899999999999999


Q ss_pred             cCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEE-----
Q psy10867        148 LSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLS-----  222 (343)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~-----  222 (343)
                      +...+...            .-.+..++......|...|..++..|+++ +.+.++++||+|+-+|++....-..     
T Consensus       124 l~~~~~~~------------~d~~~~~~~~~~~cht~rVKria~~p~~P-htfwsasEDGtirQyDiREph~c~p~~~~~  190 (758)
T KOG1310|consen  124 LDSSKEGG------------MDHGMEETTRCWSCHTDRVKRIATAPNGP-HTFWSASEDGTIRQYDIREPHVCNPDEDCP  190 (758)
T ss_pred             cccccccc------------cccCccchhhhhhhhhhhhhheecCCCCC-ceEEEecCCcceeeecccCCccCCcccccc
Confidence            98632111            11122345666778999999999999998 7899999999999999987432110     


Q ss_pred             --ee----cCCcEEEEEEcCCC-CEEEEEcCCCcEEEEEeeccccccccc----cc---CCCCCCcc-cccc--------
Q psy10867        223 --LI----LDTRLTCVAFDGTE-DNIYMGTSEGVIKSFCLRQVPRTRDHH----IQ---DSTSNPDF-IGHE--------  279 (343)
Q Consensus       223 --~~----~~~~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~----~~---~~~~~~~~-~~~~--------  279 (343)
                        +.    .--...++.++|.. .+|++|+.|-..++||.+.........    ..   ...++.-+ .+|-        
T Consensus       191 ~~l~ny~~~lielk~ltisp~rp~~laVGgsdpfarLYD~Rr~lks~~s~~~~~~~pp~~~~cv~yf~p~hlkn~~gn~~  270 (758)
T KOG1310|consen  191 SILVNYNPQLIELKCLTISPSRPYYLAVGGSDPFARLYDRRRVLKSFRSDGTMNTCPPKDCRCVRYFSPGHLKNSQGNLD  270 (758)
T ss_pred             HHHHHhchhhheeeeeeecCCCCceEEecCCCchhhhhhhhhhccCCCCCccccCCCCcccchhheecCccccCcccccc
Confidence              00    12346789999965 588999999999999954322111100    00   00011111 1111        


Q ss_pred             ---CcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeec
Q psy10867        280 ---KQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTI  317 (343)
Q Consensus       280 ---~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~  317 (343)
                         ...+.+.|+|+|.-|+..-....|+++|+..++....+
T Consensus       271 ~~~~~~t~vtfnpNGtElLvs~~gEhVYlfdvn~~~~~~~y  311 (758)
T KOG1310|consen  271 RYITCCTYVTFNPNGTELLVSWGGEHVYLFDVNEDKSPTPY  311 (758)
T ss_pred             cceeeeEEEEECCCCcEEEEeeCCeEEEEEeecCCCCceee
Confidence               12567789999976555444458999999877654443

>PRK05137 tolB translocation protein TolB; Provisional

Probab=99.81  E-value=4.2e-17  Score=138.24  Aligned_cols=222  Identities=12%  Similarity=0.060  Sum_probs=152.8

Q ss_pred             eEEEecCCC------CeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEc---CCCeEEEEeCCCcccceeccc
Q psy10867          6 EVAFSYDGS------GAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEK---GKPMIQAWPVNSQEKAQLRLI   76 (343)
Q Consensus         6 ~~~~s~~~d------g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~---~~~~i~iw~~~~~~~~~~~~~   76 (343)
                      .++|.....      ..|.+||.. +...+.+..+.. .+.+.+|+|||+.++..+   .+..|.+||+.+++... +..
T Consensus       167 ~iafv~~~~~~~~~~~~l~~~d~d-g~~~~~lt~~~~-~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~~-l~~  243 (435)
T PRK05137        167 RIVYVAESGPKNKRIKRLAIMDQD-GANVRYLTDGSS-LVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQREL-VGN  243 (435)
T ss_pred             eEEEEEeeCCCCCcceEEEEECCC-CCCcEEEecCCC-CeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEEE-eec
Confidence            456654433      388999974 555566777777 899999999997666543   23689999998876543 335


Q ss_pred             CCcceEEEEECCCCCEEEE--ecCC--eEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecC-CC--eEEEeecC
Q psy10867         77 CPGRISSMQASPDAAYIAV--SIET--KLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGE-DG--TICVWQLS  149 (343)
Q Consensus        77 ~~~~v~~~~~s~~~~~l~~--~~d~--~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-dg--~i~iwd~~  149 (343)
                      +.+.+...+|+|||+.|+.  +.++  .|++||+.+++. ..+..+........|+||++.|+..+. +|  .|.++|+.
T Consensus       244 ~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~~-~~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~  322 (435)
T PRK05137        244 FPGMTFAPRFSPDGRKVVMSLSQGGNTDIYTMDLRSGTT-TRLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNAD  322 (435)
T ss_pred             CCCcccCcEECCCCCEEEEEEecCCCceEEEEECCCCce-EEccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECC
Confidence            5667788999999998764  3344  588889887765 445556666778999999998887663 33  57788876


Q ss_pred             ccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCC---CeEEEEecCCCceEEEeecC
Q psy10867        150 RLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHD---RTCKIFDLCTGEDLLSLILD  226 (343)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d---~~i~~wd~~~~~~~~~~~~~  226 (343)
                      .+..                       ..+..+...+....|+|++  +.++..+.+   ..|.+||+..+. ...+...
T Consensus       323 g~~~-----------------------~~lt~~~~~~~~~~~SpdG--~~ia~~~~~~~~~~i~~~d~~~~~-~~~lt~~  376 (435)
T PRK05137        323 GSNP-----------------------RRISFGGGRYSTPVWSPRG--DLIAFTKQGGGQFSIGVMKPDGSG-ERILTSG  376 (435)
T ss_pred             CCCe-----------------------EEeecCCCcccCeEECCCC--CEEEEEEcCCCceEEEEEECCCCc-eEeccCC
Confidence            6422                       2222234456678899999  666665433   368888975544 3344444


Q ss_pred             CcEEEEEEcCCCCEEEEEcCC------CcEEEEEeec
Q psy10867        227 TRLTCVAFDGTEDNIYMGTSE------GVIKSFCLRQ  257 (343)
Q Consensus       227 ~~i~~~~~~~~~~~l~~~~~d------~~i~i~d~~~  257 (343)
                      ..+..+.|+|||+.|+..+.+      ..++++|+..
T Consensus       377 ~~~~~p~~spDG~~i~~~~~~~~~~~~~~L~~~dl~g  413 (435)
T PRK05137        377 FLVEGPTWAPNGRVIMFFRQTPGSGGAPKLYTVDLTG  413 (435)
T ss_pred             CCCCCCeECCCCCEEEEEEccCCCCCcceEEEEECCC
Confidence            457788999999988775442      2577777654

>PRK04922 tolB translocation protein TolB; Provisional

Probab=99.80  E-value=2e-17  Score=140.06  Aligned_cols=233  Identities=16%  Similarity=0.134  Sum_probs=153.7

Q ss_pred             CeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcC---CCeEEEEeCCCcccceecccCCcceEEEEECCCCC
Q psy10867         15 GAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKG---KPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAA   91 (343)
Q Consensus        15 g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~---~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~   91 (343)
                      ..|.+||.. +...+.+..+.. .+.+.+|+|||+.++..+.   ...|.+||+.+++.... ....+....++|+|||+
T Consensus       184 ~~l~i~D~~-g~~~~~lt~~~~-~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~~l-~~~~g~~~~~~~SpDG~  260 (433)
T PRK04922        184 YALQVADSD-GYNPQTILRSAE-PILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQRELV-ASFRGINGAPSFSPDGR  260 (433)
T ss_pred             EEEEEECCC-CCCceEeecCCC-ccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEEEe-ccCCCCccCceECCCCC
Confidence            468999985 444555666666 8899999999977666542   24799999988765433 23344556889999999


Q ss_pred             EEEE--ecCC--eEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecC-CCe--EEEeecCccceeeeeecCCCCC
Q psy10867         92 YIAV--SIET--KLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGE-DGT--ICVWQLSRLICKQTVAFGIPGS  164 (343)
Q Consensus        92 ~l~~--~~d~--~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-dg~--i~iwd~~~~~~~~~~~~~~~~~  164 (343)
                      .|+.  +.++  .|++||+.+++.. .+..+.......+|+||++.|+.++. +|.  |.++++.++..           
T Consensus       261 ~l~~~~s~~g~~~Iy~~d~~~g~~~-~lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~~-----------  328 (433)
T PRK04922        261 RLALTLSRDGNPEIYVMDLGSRQLT-RLTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGSA-----------  328 (433)
T ss_pred             EEEEEEeCCCCceEEEEECCCCCeE-ECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCe-----------
Confidence            7764  3344  6999999888754 45555555678899999998887664 444  66666655421           


Q ss_pred             CCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCC---CeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEE
Q psy10867        165 SGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHD---RTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNI  241 (343)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d---~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l  241 (343)
                                  ..+..+.......+|+|++  ++++..+.+   ..|.+||+.+++.. .+..........|+|||+++
T Consensus       329 ------------~~lt~~g~~~~~~~~SpDG--~~Ia~~~~~~~~~~I~v~d~~~g~~~-~Lt~~~~~~~p~~spdG~~i  393 (433)
T PRK04922        329 ------------ERLTFQGNYNARASVSPDG--KKIAMVHGSGGQYRIAVMDLSTGSVR-TLTPGSLDESPSFAPNGSMV  393 (433)
T ss_pred             ------------EEeecCCCCccCEEECCCC--CEEEEEECCCCceeEEEEECCCCCeE-ECCCCCCCCCceECCCCCEE
Confidence                        1111122334568999999  666655433   26999999887654 34333345567999999988


Q ss_pred             EEEcCC---CcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEcc
Q psy10867        242 YMGTSE---GVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSI  289 (343)
Q Consensus       242 ~~~~~d---~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~  289 (343)
                      +..+.+   +.|+++++....            ...+..+.+.+...+|+|
T Consensus       394 ~~~s~~~g~~~L~~~~~~g~~------------~~~l~~~~g~~~~p~wsp  432 (433)
T PRK04922        394 LYATREGGRGVLAAVSTDGRV------------RQRLVSADGEVREPAWSP  432 (433)
T ss_pred             EEEEecCCceEEEEEECCCCc------------eEEcccCCCCCCCCccCC
Confidence            776553   356777764321            222333445566677776

>PRK02889 tolB translocation protein TolB; Provisional

Probab=99.80  E-value=4.4e-17  Score=137.45  Aligned_cols=245  Identities=18%  Similarity=0.120  Sum_probs=155.6

Q ss_pred             ceEEEEEcCC--CeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-ec---CCeEEEEEccCCceEEEecccCCC
Q psy10867         48 DYVLGVEKGK--PMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SI---ETKLHMWQISSGRLLATASSHYQP  121 (343)
Q Consensus        48 ~~~~~~~~~~--~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~---d~~i~v~~~~~~~~~~~~~~~~~~  121 (343)
                      ++++......  ..|.++|..... .+.+..+...+.+.+|+|||+.|+. +.   ...|++||+.+++... +....+.
T Consensus       164 ~~iayv~~~~~~~~L~~~D~dG~~-~~~l~~~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~-l~~~~g~  241 (427)
T PRK02889        164 TRIAYVIKTGNRYQLQISDADGQN-AQSALSSPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRV-VANFKGS  241 (427)
T ss_pred             cEEEEEEccCCccEEEEECCCCCC-ceEeccCCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEE-eecCCCC
Confidence            4455444332  357777765433 3334466778999999999998885 32   2469999999887643 3334455


Q ss_pred             eEEEEEecCCCEEE-EecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEE
Q psy10867        122 ITIVKWSADSNFIV-TGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRV  200 (343)
Q Consensus       122 v~~~~~~~~~~~l~-s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l  200 (343)
                      +....|+|||+.|+ +.+.+|...+|.++....                     ....+..+........|+|+|  +.+
T Consensus       242 ~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~---------------------~~~~lt~~~~~~~~~~wSpDG--~~l  298 (427)
T PRK02889        242 NSAPAWSPDGRTLAVALSRDGNSQIYTVNADGS---------------------GLRRLTQSSGIDTEPFFSPDG--RSI  298 (427)
T ss_pred             ccceEECCCCCEEEEEEccCCCceEEEEECCCC---------------------CcEECCCCCCCCcCeEEcCCC--CEE
Confidence            67899999999876 567788766665532100                     122333344455678899999  566


Q ss_pred             EEee-CCCeEEEEec--CCCceEEEeecCCcEEEEEEcCCCCEEEEEcCCC---cEEEEEeecccccccccccCCCCCCc
Q psy10867        201 ASVS-HDRTCKIFDL--CTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEG---VIKSFCLRQVPRTRDHHIQDSTSNPD  274 (343)
Q Consensus       201 ~~~~-~d~~i~~wd~--~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~---~i~i~d~~~~~~~~~~~~~~~~~~~~  274 (343)
                      +..+ .++...+|.+  .+++...............|+|+|++|+..+.++   .|.+||+.......            
T Consensus       299 ~f~s~~~g~~~Iy~~~~~~g~~~~lt~~g~~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~~~~------------  366 (427)
T PRK02889        299 YFTSDRGGAPQIYRMPASGGAAQRVTFTGSYNTSPRISPDGKLLAYISRVGGAFKLYVQDLATGQVTA------------  366 (427)
T ss_pred             EEEecCCCCcEEEEEECCCCceEEEecCCCCcCceEECCCCCEEEEEEccCCcEEEEEEECCCCCeEE------------
Confidence            5544 3455566644  4444322222233345688999999998776554   68999987643211            


Q ss_pred             cccccCcEEEEEEccCCCEEEEEeCCC---cEEEEecccceeeeecc-cCCceEEEEEccC
Q psy10867        275 FIGHEKQVTSLSCSITGITLLSSSADE---TLKIWHTISRQCLRTIQ-HKGPVLGAFLGLL  331 (343)
Q Consensus       275 ~~~~~~~v~~~~~s~~~~~l~s~~~dg---~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~  331 (343)
                      +.. ........|+|||+.|+..+.++   .+.+.++ +++....+. +.+.+...+|+|-
T Consensus       367 lt~-~~~~~~p~~spdg~~l~~~~~~~g~~~l~~~~~-~g~~~~~l~~~~g~~~~p~wsp~  425 (427)
T PRK02889        367 LTD-TTRDESPSFAPNGRYILYATQQGGRSVLAAVSS-DGRIKQRLSVQGGDVREPSWGPF  425 (427)
T ss_pred             ccC-CCCccCceECCCCCEEEEEEecCCCEEEEEEEC-CCCceEEeecCCCCCCCCccCCC
Confidence            111 12235679999999888776544   3555565 466666665 6677888899874

>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A

Probab=99.80  E-value=1.8e-16  Score=129.71  Aligned_cols=281  Identities=11%  Similarity=0.107  Sum_probs=177.0

Q ss_pred             EEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEE-cCCCeEEEEeCCCcccceeccc-------CC
Q psy10867          7 VAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVE-KGKPMIQAWPVNSQEKAQLRLI-------CP   78 (343)
Q Consensus         7 ~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~~~~i~iw~~~~~~~~~~~~~-------~~   78 (343)
                      .+|..+.||.|.++|+.+++.+.+++...  ...++++++||++++++ ...+.+.++|.++.+.++....       ..
T Consensus        50 ~~yv~~rdg~vsviD~~~~~~v~~i~~G~--~~~~i~~s~DG~~~~v~n~~~~~v~v~D~~tle~v~~I~~~~~~~~~~~  127 (369)
T PF02239_consen   50 YLYVANRDGTVSVIDLATGKVVATIKVGG--NPRGIAVSPDGKYVYVANYEPGTVSVIDAETLEPVKTIPTGGMPVDGPE  127 (369)
T ss_dssp             EEEEEETTSEEEEEETTSSSEEEEEE-SS--EEEEEEE--TTTEEEEEEEETTEEEEEETTT--EEEEEE--EE-TTTS-
T ss_pred             EEEEEcCCCeEEEEECCcccEEEEEecCC--CcceEEEcCCCCEEEEEecCCCceeEeccccccceeecccccccccccC
Confidence            34445558999999999999999998866  57899999999777655 4568999999999888765432       23


Q ss_pred             cceEEEEECCCCCEEE-Eec-CCeEEEEEccCCceEE-EecccCCCeEEEEEecCCCEEEEe-cCCCeEEEeecCcccee
Q psy10867         79 GRISSMQASPDAAYIA-VSI-ETKLHMWQISSGRLLA-TASSHYQPITIVKWSADSNFIVTG-GEDGTICVWQLSRLICK  154 (343)
Q Consensus        79 ~~v~~~~~s~~~~~l~-~~~-d~~i~v~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~s~-~~dg~i~iwd~~~~~~~  154 (343)
                      .++..+..+|....++ .-. .+.|.+.|..+...+. .............|+|++++++.+ ..+..|-++|..+.+..
T Consensus       128 ~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d~~~~~~~~i~~g~~~~D~~~dpdgry~~va~~~sn~i~viD~~~~k~v  207 (369)
T PF02239_consen  128 SRVAAIVASPGRPEFVVNLKDTGEIWVVDYSDPKNLKVTTIKVGRFPHDGGFDPDGRYFLVAANGSNKIAVIDTKTGKLV  207 (369)
T ss_dssp             --EEEEEE-SSSSEEEEEETTTTEEEEEETTTSSCEEEEEEE--TTEEEEEE-TTSSEEEEEEGGGTEEEEEETTTTEEE
T ss_pred             CCceeEEecCCCCEEEEEEccCCeEEEEEeccccccceeeecccccccccccCcccceeeecccccceeEEEeeccceEE
Confidence            5688888888887554 444 4788888877654332 222234557789999999987664 45678999999987665


Q ss_pred             eeeecCCCCCCCCccccccceeeeecccccceEEE-------EeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCC
Q psy10867        155 QTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHV-------TLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDT  227 (343)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-------~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~  227 (343)
                      ..+..+                  ...|..+...+       .|...+.....++.-....+.+||..+.+.++++...+
T Consensus       208 ~~i~~g------------------~~p~~~~~~~~php~~g~vw~~~~~~~~~~~~ig~~~v~v~d~~~wkvv~~I~~~G  269 (369)
T PF02239_consen  208 ALIDTG------------------KKPHPGPGANFPHPGFGPVWATSGLGYFAIPLIGTDPVSVHDDYAWKVVKTIPTQG  269 (369)
T ss_dssp             EEEE-S------------------SSBEETTEEEEEETTTEEEEEEEBSSSSEEEEEE--TTT-STTTBTSEEEEEE-SS
T ss_pred             EEeecc------------------ccccccccccccCCCcceEEeeccccceecccccCCccccchhhcCeEEEEEECCC
Confidence            543211                  01122222211       12111111223233333456689999999999999665


Q ss_pred             cEEEEEEcCCCCEEEEE----cCCCcEEEEEeecccccccccccCCCCCCccc-cccCcEEEEEEccCCCEEEEEeCC--
Q psy10867        228 RLTCVAFDGTEDNIYMG----TSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFI-GHEKQVTSLSCSITGITLLSSSAD--  300 (343)
Q Consensus       228 ~i~~~~~~~~~~~l~~~----~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~s~~~d--  300 (343)
                      .-.-+..+|+++++++.    ...+.|.++|.++.+...           .+. +....+..+.|+++|+.+..+..+  
T Consensus       270 ~glFi~thP~s~~vwvd~~~~~~~~~v~viD~~tl~~~~-----------~i~~~~~~~~~h~ef~~dG~~v~vS~~~~~  338 (369)
T PF02239_consen  270 GGLFIKTHPDSRYVWVDTFLNPDADTVQVIDKKTLKVVK-----------TITPGPGKRVVHMEFNPDGKEVWVSVWDGN  338 (369)
T ss_dssp             SS--EE--TT-SEEEEE-TT-SSHT-EEEEECCGTEEEE------------HHHHHT--EEEEEE-TTSSEEEEEEE--T
T ss_pred             CcceeecCCCCccEEeeccCCCCCceEEEEECcCcceeE-----------EEeccCCCcEeccEECCCCCEEEEEEecCC
Confidence            55888899999999998    456899999999864432           222 122348899999999977655443  


Q ss_pred             CcEEEEecccceeeeecc
Q psy10867        301 ETLKIWHTISRQCLRTIQ  318 (343)
Q Consensus       301 g~i~iwd~~~~~~~~~~~  318 (343)
                      +.|.+||..+.+.+..+.
T Consensus       339 ~~i~v~D~~Tl~~~~~i~  356 (369)
T PF02239_consen  339 GAIVVYDAKTLKEKKRIP  356 (369)
T ss_dssp             TEEEEEETTTTEEEEEEE
T ss_pred             CEEEEEECCCcEEEEEEE
Confidence            369999999999988876

...

>KOG2111|consensus

Probab=99.80  E-value=8.5e-16  Score=115.79  Aligned_cols=227  Identities=17%  Similarity=0.200  Sum_probs=155.7

Q ss_pred             EecCCCCeEEEEecCCceEEEEEecCCC-CcceEEEEeCCceEEEEEcC-----CCeEEEEeCCCcccceecccCCcceE
Q psy10867          9 FSYDGSGAISVWEPKGGTLLMSYKGASV-LSPHSMCLLGNDYVLGVEKG-----KPMIQAWPVNSQEKAQLRLICPGRIS   82 (343)
Q Consensus         9 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~-----~~~i~iw~~~~~~~~~~~~~~~~~v~   82 (343)
                      |+..-|.-.+||+.+.-+...+-+.+.. ..+.-|-|-.+-..+++|..     .+.+.|||-...+++..+ ....+|.
T Consensus        20 Fava~~~Gfriyn~~P~ke~~~r~~~~~G~~~veMLfR~N~laLVGGg~~pky~pNkviIWDD~k~~~i~el-~f~~~I~   98 (346)
T KOG2111|consen   20 FAVATDTGFRIYNCDPFKESASRQFIDGGFKIVEMLFRSNYLALVGGGSRPKYPPNKVIIWDDLKERCIIEL-SFNSEIK   98 (346)
T ss_pred             EEEEecCceEEEecCchhhhhhhccccCchhhhhHhhhhceEEEecCCCCCCCCCceEEEEecccCcEEEEE-Eecccee
Confidence            3333355689998875333222222211 24444444333233333332     148999995555555443 5678899


Q ss_pred             EEEECCCCCEEEEecCCeEEEEEccC-CceEEEecccC--CCeEEEEEecCCCEEEE-ecCCCeEEEeecCccceeeeee
Q psy10867         83 SMQASPDAAYIAVSIETKLHMWQISS-GRLLATASSHY--QPITIVKWSADSNFIVT-GGEDGTICVWQLSRLICKQTVA  158 (343)
Q Consensus        83 ~~~~s~~~~~l~~~~d~~i~v~~~~~-~~~~~~~~~~~--~~v~~~~~~~~~~~l~s-~~~dg~i~iwd~~~~~~~~~~~  158 (343)
                      ++.+.++  .|++-.++.|+||...+ -+.++.+..-.  ....+++=+.+..+|+. |-.-|.|.|-|+......    
T Consensus        99 ~V~l~r~--riVvvl~~~I~VytF~~n~k~l~~~et~~NPkGlC~~~~~~~k~~LafPg~k~GqvQi~dL~~~~~~----  172 (346)
T KOG2111|consen   99 AVKLRRD--RIVVVLENKIYVYTFPDNPKLLHVIETRSNPKGLCSLCPTSNKSLLAFPGFKTGQVQIVDLASTKPN----  172 (346)
T ss_pred             eEEEcCC--eEEEEecCeEEEEEcCCChhheeeeecccCCCceEeecCCCCceEEEcCCCccceEEEEEhhhcCcC----
Confidence            9999754  67777789999999874 45555554322  23333332223344544 445799999999875321    


Q ss_pred             cCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCe-EEEEecCCCceEEEee---cCCcEEEEEE
Q psy10867        159 FGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRT-CKIFDLCTGEDLLSLI---LDTRLTCVAF  234 (343)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~-i~~wd~~~~~~~~~~~---~~~~i~~~~~  234 (343)
                                      +.....+|...|.|++.+.+|  .++|++|..|+ |||||..+|+.+.+++   ....|.+++|
T Consensus       173 ----------------~p~~I~AH~s~Iacv~Ln~~G--t~vATaStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~iaF  234 (346)
T KOG2111|consen  173 ----------------APSIINAHDSDIACVALNLQG--TLVATASTKGTLIRIFDTEDGTLLQELRRGVDRADIYCIAF  234 (346)
T ss_pred             ----------------CceEEEcccCceeEEEEcCCc--cEEEEeccCcEEEEEEEcCCCcEeeeeecCCchheEEEEEe
Confidence                            235667899999999999999  89999999988 7999999999999987   3567999999


Q ss_pred             cCCCCEEEEEcCCCcEEEEEeecccc
Q psy10867        235 DGTEDNIYMGTSEGVIKSFCLRQVPR  260 (343)
Q Consensus       235 ~~~~~~l~~~~~d~~i~i~d~~~~~~  260 (343)
                      +|+..+|++++..|+++||.++....
T Consensus       235 Sp~~s~LavsSdKgTlHiF~l~~~~~  260 (346)
T KOG2111|consen  235 SPNSSWLAVSSDKGTLHIFSLRDTEN  260 (346)
T ss_pred             CCCccEEEEEcCCCeEEEEEeecCCC
Confidence            99999999999999999999987543

>KOG2321|consensus

Probab=99.80  E-value=4.3e-17  Score=131.95  Aligned_cols=267  Identities=14%  Similarity=0.099  Sum_probs=189.5

Q ss_pred             cceEEEEeCCc-eEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEE-EecCCeEEEEEccCCceEEEe
Q psy10867         38 SPHSMCLLGND-YVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIA-VSIETKLHMWQISSGRLLATA  115 (343)
Q Consensus        38 ~v~~~~~~~~~-~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-~~~d~~i~v~~~~~~~~~~~~  115 (343)
                      ..+.|..+||| .++|+|.....|++||+.+........-....|.-.-.+.|-..++ -..|..|.+-.- -|.- ..+
T Consensus        53 ast~ik~s~DGqY~lAtG~YKP~ikvydlanLSLKFERhlDae~V~feiLsDD~SK~v~L~~DR~IefHak-~G~h-y~~  130 (703)
T KOG2321|consen   53 ASTRIKVSPDGQYLLATGTYKPQIKVYDLANLSLKFERHLDAEVVDFEILSDDYSKSVFLQNDRTIEFHAK-YGRH-YRT  130 (703)
T ss_pred             ccceeEecCCCcEEEEecccCCceEEEEcccceeeeeecccccceeEEEeccchhhheEeecCceeeehhh-cCee-eee
Confidence            67889999998 5567777778999999987665433322233444444454443333 366777766542 2221 111


Q ss_pred             cccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCC
Q psy10867        116 SSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLG  195 (343)
Q Consensus       116 ~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  195 (343)
                      +- ...-..++++.-.--|+.++....|+-+++..+..+.                      .+....+.++++.+++-.
T Consensus       131 RI-P~~GRDm~y~~~scDly~~gsg~evYRlNLEqGrfL~----------------------P~~~~~~~lN~v~in~~h  187 (703)
T KOG2321|consen  131 RI-PKFGRDMKYHKPSCDLYLVGSGSEVYRLNLEQGRFLN----------------------PFETDSGELNVVSINEEH  187 (703)
T ss_pred             ec-CcCCccccccCCCccEEEeecCcceEEEEcccccccc----------------------ccccccccceeeeecCcc
Confidence            11 1223466666533445555555789999998876443                      334456889999999987


Q ss_pred             CceEEEEeeCCCeEEEEecCCCceEEEeecCC------------cEEEEEEcCCCCEEEEEcCCCcEEEEEeeccccccc
Q psy10867        196 AKSRVASVSHDRTCKIFDLCTGEDLLSLILDT------------RLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRD  263 (343)
Q Consensus       196 ~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~------------~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~  263 (343)
                        .+|++|+.+|.+.+||.++...+..+....            .|+++.|+.+|-.+++|+.+|.+.|||++...... 
T Consensus       188 --gLla~Gt~~g~VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~-  264 (703)
T KOG2321|consen  188 --GLLACGTEDGVVEFWDPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLL-  264 (703)
T ss_pred             --ceEEecccCceEEEecchhhhhheeeecccccCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEcccCCcee-
Confidence              799999999999999999888777665322            39999999999999999999999999999854432 


Q ss_pred             ccccCCCCCCccccccCcEEEEEEccC--CCEEEEEeCCCcEEEEecccceeeeecccCCceEEEEEccCCCeeeecccC
Q psy10867        264 HHIQDSTSNPDFIGHEKQVTSLSCSIT--GITLLSSSADETLKIWHTISRQCLRTIQHKGPVLGAFLGLLPPAIHDYDFT  341 (343)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~  341 (343)
                               ..-.+..-+|..+.|.+.  ++.+++. ....++|||-.+|+....++....+..+++-|++-+++++.-.
T Consensus       265 ---------~kdh~~e~pi~~l~~~~~~~q~~v~S~-Dk~~~kiWd~~~Gk~~asiEpt~~lND~C~~p~sGm~f~Ane~  334 (703)
T KOG2321|consen  265 ---------VKDHGYELPIKKLDWQDTDQQNKVVSM-DKRILKIWDECTGKPMASIEPTSDLNDFCFVPGSGMFFTANES  334 (703)
T ss_pred             ---------ecccCCccceeeecccccCCCceEEec-chHHhhhcccccCCceeeccccCCcCceeeecCCceEEEecCC
Confidence                     112233457888899775  3455555 3458999999999999999988889999999999999887544


Q ss_pred             C
Q psy10867        342 P  342 (343)
Q Consensus       342 ~  342 (343)
                      +
T Consensus       335 ~  335 (703)
T KOG2321|consen  335 S  335 (703)
T ss_pred             C
Confidence            3

>KOG2139|consensus

Probab=99.80  E-value=5.1e-17  Score=124.37  Aligned_cols=183  Identities=13%  Similarity=0.211  Sum_probs=134.7

Q ss_pred             cceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCC-CEEEEecCCeEEEEEccCC----ce-
Q psy10867         38 SPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDA-AYIAVSIETKLHMWQISSG----RL-  111 (343)
Q Consensus        38 ~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~d~~i~v~~~~~~----~~-  111 (343)
                      .+..++|++.-.-++.+..|-.|++|+-...............|++++|-|.+ .-|+.+..+.|.+|.....    +. 
T Consensus       100 dlr~~aWhqH~~~fava~nddvVriy~ksst~pt~Lks~sQrnvtclawRPlsaselavgCr~gIciW~~s~tln~~r~~  179 (445)
T KOG2139|consen  100 DLRGVAWHQHIIAFAVATNDDVVRIYDKSSTCPTKLKSVSQRNVTCLAWRPLSASELAVGCRAGICIWSDSRTLNANRNI  179 (445)
T ss_pred             ceeeEeechhhhhhhhhccCcEEEEeccCCCCCceecchhhcceeEEEeccCCcceeeeeecceeEEEEcCccccccccc
Confidence            56788898865556666666899999987744334344556689999999955 5677787888999986421    11 


Q ss_pred             ---------EEEecccCCCeEEEEEecCCCEEEEecC-CCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecc
Q psy10867        112 ---------LATASSHYQPITIVKWSADSNFIVTGGE-DGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQ  181 (343)
Q Consensus       112 ---------~~~~~~~~~~v~~~~~~~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (343)
                               +..-.+| .+|++++|.+||..+++++. |..|.|||..++....                    +.  ..
T Consensus       180 ~~~s~~~~qvl~~pgh-~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~p--------------------L~--~~  236 (445)
T KOG2139|consen  180 RMMSTHHLQVLQDPGH-NPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIP--------------------LI--PK  236 (445)
T ss_pred             ccccccchhheeCCCC-ceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCccc--------------------cc--cc
Confidence                     1122344 68999999999999999885 6789999999875432                    11  23


Q ss_pred             cccceEEEEeecCCCceEEEEeeCCCeEEEEecC-CCceEEEeecCCcEEEEEEcCCCCEEEEEc
Q psy10867        182 HSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLC-TGEDLLSLILDTRLTCVAFDGTEDNIYMGT  245 (343)
Q Consensus       182 ~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~  245 (343)
                      ..+.+.-+.|+|++  .+|++++-|+..++|+.. +....+-.-..+.+...+|+|+|++|+...
T Consensus       237 glgg~slLkwSPdg--d~lfaAt~davfrlw~e~q~wt~erw~lgsgrvqtacWspcGsfLLf~~  299 (445)
T KOG2139|consen  237 GLGGFSLLKWSPDG--DVLFAATCDAVFRLWQENQSWTKERWILGSGRVQTACWSPCGSFLLFAC  299 (445)
T ss_pred             CCCceeeEEEcCCC--CEEEEecccceeeeehhcccceecceeccCCceeeeeecCCCCEEEEEE
Confidence            45678899999999  899999999999999543 333333333566899999999999877654

>KOG1272|consensus

Probab=99.80  E-value=3.8e-19  Score=140.01  Aligned_cols=257  Identities=16%  Similarity=0.133  Sum_probs=201.4

Q ss_pred             EEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEEC
Q psy10867          8 AFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQAS   87 (343)
Q Consensus         8 ~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s   87 (343)
                      ++-++..|.|..+|+.++++...+...+  .|.++.|-.+..++|++.. ..+.|||-..-+ ++.+.. ...|..+.|.
T Consensus       144 lllgGrKGHlAa~Dw~t~~L~~Ei~v~E--tv~Dv~~LHneq~~AVAQK-~y~yvYD~~GtE-lHClk~-~~~v~rLeFL  218 (545)
T KOG1272|consen  144 LLLGGRKGHLAAFDWVTKKLHFEINVME--TVRDVTFLHNEQFFAVAQK-KYVYVYDNNGTE-LHCLKR-HIRVARLEFL  218 (545)
T ss_pred             EEecCCccceeeeecccceeeeeeehhh--hhhhhhhhcchHHHHhhhh-ceEEEecCCCcE-Eeehhh-cCchhhhccc
Confidence            3444557999999999999999988877  7999999999999999988 899999966444 444433 4578999999


Q ss_pred             CCCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCC
Q psy10867         88 PDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSG  166 (343)
Q Consensus        88 ~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~  166 (343)
                      |..-+|++ +..|-++.-|+.+|+.+..+..-.+.+..++-+|-...+-+|..+|+|.+|.....+              
T Consensus       219 PyHfLL~~~~~~G~L~Y~DVS~GklVa~~~t~~G~~~vm~qNP~NaVih~GhsnGtVSlWSP~ske--------------  284 (545)
T KOG1272|consen  219 PYHFLLVAASEAGFLKYQDVSTGKLVASIRTGAGRTDVMKQNPYNAVIHLGHSNGTVSLWSPNSKE--------------  284 (545)
T ss_pred             chhheeeecccCCceEEEeechhhhhHHHHccCCccchhhcCCccceEEEcCCCceEEecCCCCcc--------------
Confidence            99888887 677899999999999999998888899999999988899999999999999998753              


Q ss_pred             CccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcC
Q psy10867        167 KGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTS  246 (343)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~  246 (343)
                              ++..+..|.++|.++++.+.|  .++++.+.|..++|||++....+.++..+.+...+++|..|  +++.+.
T Consensus       285 --------PLvKiLcH~g~V~siAv~~~G--~YMaTtG~Dr~~kIWDlR~~~ql~t~~tp~~a~~ls~Sqkg--lLA~~~  352 (545)
T KOG1272|consen  285 --------PLVKILCHRGPVSSIAVDRGG--RYMATTGLDRKVKIWDLRNFYQLHTYRTPHPASNLSLSQKG--LLALSY  352 (545)
T ss_pred             --------hHHHHHhcCCCcceEEECCCC--cEEeecccccceeEeeeccccccceeecCCCcccccccccc--ceeeec
Confidence                    666667899999999999999  89999999999999999999888887777788888998654  444455


Q ss_pred             CCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCC
Q psy10867        247 EGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADE  301 (343)
Q Consensus       247 d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg  301 (343)
                      ...+.||.=........     .. ...-....+.|..+.|.|-...|-.|-..|
T Consensus       353 G~~v~iw~d~~~~s~~~-----~~-pYm~H~~~~~V~~l~FcP~EDvLGIGH~~G  401 (545)
T KOG1272|consen  353 GDHVQIWKDALKGSGHG-----ET-PYMNHRCGGPVEDLRFCPYEDVLGIGHAGG  401 (545)
T ss_pred             CCeeeeehhhhcCCCCC-----Cc-chhhhccCcccccceeccHHHeeeccccCC
Confidence            66789995332111000     00 000111234788899988665555554444

>KOG2394|consensus

Probab=99.79  E-value=2.9e-17  Score=131.88  Aligned_cols=218  Identities=11%  Similarity=0.101  Sum_probs=157.9

Q ss_pred             eEEEEECCCCCEEEEecCCeEEEEEccCCceEE------EecccCCCeEEEEE-----ecCCCEEEEecCCCeEEEeecC
Q psy10867         81 ISSMQASPDAAYIAVSIETKLHMWQISSGRLLA------TASSHYQPITIVKW-----SADSNFIVTGGEDGTICVWQLS  149 (343)
Q Consensus        81 v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~------~~~~~~~~v~~~~~-----~~~~~~l~s~~~dg~i~iwd~~  149 (343)
                      +....++-.|.+|+-.....+++|+.+.+..+.      .+++ .+ ..|=+|     .|++--++.|-.-|.+.+.|..
T Consensus       126 ~~~~~~~~~gd~lcFnvg~~lyv~~~~g~~~~~~pi~k~~y~g-t~-P~cHdfn~~~a~~~g~dllIGf~tGqvq~idp~  203 (636)
T KOG2394|consen  126 VTNTNQSGKGDRLCFNVGRELYVYSYRGAADLSKPIDKREYKG-TS-PTCHDFNSFTATPKGLDLLIGFTTGQVQLIDPI  203 (636)
T ss_pred             eeeccccCCCCEEEEecCCeEEEEEccCcchhccchhhhcccC-CC-CceecccccccCCCCcceEEeeccCceEEecch
Confidence            445555556788887777789999987542221      1221 11 223333     3466678888888999999887


Q ss_pred             ccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCC-------------
Q psy10867        150 RLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCT-------------  216 (343)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~-------------  216 (343)
                      ..+...-+.                  ....-.+..++++.|-|.++ ..++.+-.+|.+++||..-             
T Consensus       204 ~~~~sklfn------------------e~r~i~ktsvT~ikWvpg~~-~~Fl~a~~sGnlyly~~~~~~~~t~p~~~~~k  264 (636)
T KOG2394|consen  204 NFEVSKLFN------------------EERLINKSSVTCIKWVPGSD-SLFLVAHASGNLYLYDKEIVCGATAPSYQALK  264 (636)
T ss_pred             hhHHHHhhh------------------hcccccccceEEEEEEeCCC-ceEEEEEecCceEEeeccccccCCCCcccccC
Confidence            632221111                  00111347899999999876 6777888899999997631             


Q ss_pred             -Cc--------------eEEEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccC
Q psy10867        217 -GE--------------DLLSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEK  280 (343)
Q Consensus       217 -~~--------------~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (343)
                       +.              ++..+. ....|...+|+|||++||+.+.||.++|||..+.+.           +..++..-+
T Consensus       265 ~~~~f~i~t~ksk~~rNPv~~w~~~~g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~eL-----------lg~mkSYFG  333 (636)
T KOG2394|consen  265 DGDQFAILTSKSKKTRNPVARWHIGEGSINEFAFSPDGKYLATVSQDGFLRIFDFDTQEL-----------LGVMKSYFG  333 (636)
T ss_pred             CCCeeEEeeeeccccCCccceeEeccccccceeEcCCCceEEEEecCceEEEeeccHHHH-----------HHHHHhhcc
Confidence             10              111111 245688999999999999999999999999988654           333444567


Q ss_pred             cEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc-cCCceEEEEEcc
Q psy10867        281 QVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVLGAFLGL  330 (343)
Q Consensus       281 ~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp  330 (343)
                      ...|++|||||+||++|++|.-|.||.+..++.+..-. |+..|..++|.|
T Consensus       334 GLLCvcWSPDGKyIvtGGEDDLVtVwSf~erRVVARGqGHkSWVs~VaFDp  384 (636)
T KOG2394|consen  334 GLLCVCWSPDGKYIVTGGEDDLVTVWSFEERRVVARGQGHKSWVSVVAFDP  384 (636)
T ss_pred             ceEEEEEcCCccEEEecCCcceEEEEEeccceEEEeccccccceeeEeecc
Confidence            89999999999999999999999999999999999887 999999999997

>KOG2394|consensus

Probab=99.79  E-value=8.2e-18  Score=134.97  Aligned_cols=220  Identities=17%  Similarity=0.181  Sum_probs=147.4

Q ss_pred             CeEEEEecCCceEEE------EEecCCCCcceEEEEe-----CCceEEEEEcCCCeEEEEeCCCcccceecc----cCCc
Q psy10867         15 GAISVWEPKGGTLLM------SYKGASVLSPHSMCLL-----GNDYVLGVEKGKPMIQAWPVNSQEKAQLRL----ICPG   79 (343)
Q Consensus        15 g~i~iwd~~~~~~~~------~~~~~~~~~v~~~~~~-----~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~----~~~~   79 (343)
                      ..+++|+...+..+.      .+++.   ...|-+|+     |.+.-+..|-..|.+.+.|....+..+.+.    ..+.
T Consensus       144 ~~lyv~~~~g~~~~~~pi~k~~y~gt---~P~cHdfn~~~a~~~g~dllIGf~tGqvq~idp~~~~~sklfne~r~i~kt  220 (636)
T KOG2394|consen  144 RELYVYSYRGAADLSKPIDKREYKGT---SPTCHDFNSFTATPKGLDLLIGFTTGQVQLIDPINFEVSKLFNEERLINKS  220 (636)
T ss_pred             CeEEEEEccCcchhccchhhhcccCC---CCceecccccccCCCCcceEEeeccCceEEecchhhHHHHhhhhccccccc
Confidence            356777766432221      12221   34455553     455444445445899998877643332221    3357


Q ss_pred             ceEEEEECCC--CCEEEEecCCeEEEEEccCCceEEEecccCCCeEEEEE--ecCCCEEEEecCCCeEEEeecCccceee
Q psy10867         80 RISSMQASPD--AAYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKW--SADSNFIVTGGEDGTICVWQLSRLICKQ  155 (343)
Q Consensus        80 ~v~~~~~s~~--~~~l~~~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~s~~~dg~i~iwd~~~~~~~~  155 (343)
                      .|+++.|-|.  +.+|++-.+|.+++||..          +....+...|  .+++..+.....-+..      +.    
T Consensus       221 svT~ikWvpg~~~~Fl~a~~sGnlyly~~~----------~~~~~t~p~~~~~k~~~~f~i~t~ksk~------~r----  280 (636)
T KOG2394|consen  221 SVTCIKWVPGSDSLFLVAHASGNLYLYDKE----------IVCGATAPSYQALKDGDQFAILTSKSKK------TR----  280 (636)
T ss_pred             ceEEEEEEeCCCceEEEEEecCceEEeecc----------ccccCCCCcccccCCCCeeEEeeeeccc------cC----
Confidence            8999999884  456667789999999961          1111222222  2355555443221110      00    


Q ss_pred             eeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEE
Q psy10867        156 TVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAF  234 (343)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~  234 (343)
                                        .++..+.--...|...+|+|+|  ++||+.+.||.+||||..+.+.+..++ .-+...|++|
T Consensus       281 ------------------NPv~~w~~~~g~in~f~FS~DG--~~LA~VSqDGfLRvF~fdt~eLlg~mkSYFGGLLCvcW  340 (636)
T KOG2394|consen  281 ------------------NPVARWHIGEGSINEFAFSPDG--KYLATVSQDGFLRIFDFDTQELLGVMKSYFGGLLCVCW  340 (636)
T ss_pred             ------------------CccceeEeccccccceeEcCCC--ceEEEEecCceEEEeeccHHHHHHHHHhhccceEEEEE
Confidence                              1333333445689999999999  899999999999999999988776665 5678999999


Q ss_pred             cCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEc
Q psy10867        235 DGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCS  288 (343)
Q Consensus       235 ~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s  288 (343)
                      +|||++|++|+.|.-|.||.+.....           +..-.+|+.+|+.++|.
T Consensus       341 SPDGKyIvtGGEDDLVtVwSf~erRV-----------VARGqGHkSWVs~VaFD  383 (636)
T KOG2394|consen  341 SPDGKYIVTGGEDDLVTVWSFEERRV-----------VARGQGHKSWVSVVAFD  383 (636)
T ss_pred             cCCccEEEecCCcceEEEEEeccceE-----------EEeccccccceeeEeec
Confidence            99999999999999999999987443           55667899999999998

>KOG2139|consensus

Probab=99.79  E-value=4e-16  Score=119.58  Aligned_cols=266  Identities=15%  Similarity=0.165  Sum_probs=175.5

Q ss_pred             cCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCc-eEEEEEcCCCeEEEEeCCCc----cc--------ceecc-c
Q psy10867         11 YDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGND-YVLGVEKGKPMIQAWPVNSQ----EK--------AQLRL-I   76 (343)
Q Consensus        11 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~i~iw~~~~~----~~--------~~~~~-~   76 (343)
                      +..|..|++||-.+ ++...++......|+|++|-|.+ .-++.|.. +.|.+|.....    ..        .+.+. .
T Consensus       116 a~nddvVriy~kss-t~pt~Lks~sQrnvtclawRPlsaselavgCr-~gIciW~~s~tln~~r~~~~~s~~~~qvl~~p  193 (445)
T KOG2139|consen  116 ATNDDVVRIYDKSS-TCPTKLKSVSQRNVTCLAWRPLSASELAVGCR-AGICIWSDSRTLNANRNIRMMSTHHLQVLQDP  193 (445)
T ss_pred             hccCcEEEEeccCC-CCCceecchhhcceeEEEeccCCcceeeeeec-ceeEEEEcCcccccccccccccccchhheeCC
Confidence            44577999999766 66666666544489999999964 67777777 67999976421    11        11111 1


Q ss_pred             CCcceEEEEECCCCCEEEEe--cCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCcccee
Q psy10867         77 CPGRISSMQASPDAAYIAVS--IETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICK  154 (343)
Q Consensus        77 ~~~~v~~~~~s~~~~~l~~~--~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~  154 (343)
                      ...+|++++|.+||..++++  .+..|.|||..++..+.......+.+.-+.|+||+.+|+.+.-|+..++|+.......
T Consensus       194 gh~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~glgg~slLkwSPdgd~lfaAt~davfrlw~e~q~wt~  273 (445)
T KOG2139|consen  194 GHNPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLIPKGLGGFSLLKWSPDGDVLFAATCDAVFRLWQENQSWTK  273 (445)
T ss_pred             CCceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCcccccccCCCceeeEEEcCCCCEEEEecccceeeeehhccccee
Confidence            22689999999999999974  4679999999999876655445677899999999999999999999999966543211


Q ss_pred             eeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCc----------eE---E
Q psy10867        155 QTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGE----------DL---L  221 (343)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~----------~~---~  221 (343)
                                           .+- .-..+.|...+|+|.|. .+|++.+..-.++-.......          ..   .
T Consensus       274 ---------------------erw-~lgsgrvqtacWspcGs-fLLf~~sgsp~lysl~f~~~~~~~~~~~~~k~~llia  330 (445)
T KOG2139|consen  274 ---------------------ERW-ILGSGRVQTACWSPCGS-FLLFACSGSPRLYSLTFDGEDSVFLRPQSIKRVLLIA  330 (445)
T ss_pred             ---------------------cce-eccCCceeeeeecCCCC-EEEEEEcCCceEEEEeecCCCccccCcccceeeeeec
Confidence                                 111 11344899999999996 556666555444433221110          00   0


Q ss_pred             Eee----------cCCcEEEEEEcCCCCEEEEEcCCC--------cEEEEEeecccccccccccCCCCCCccccccCcEE
Q psy10867        222 SLI----------LDTRLTCVAFDGTEDNIYMGTSEG--------VIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVT  283 (343)
Q Consensus       222 ~~~----------~~~~i~~~~~~~~~~~l~~~~~d~--------~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  283 (343)
                      .+.          ..+++.+++|+|.|.+|++.-..+        .|.+||.+........       ..-+.+. ....
T Consensus       331 DL~e~ti~ag~~l~cgeaq~lawDpsGeyLav~fKg~~~v~~~k~~i~~fdtr~sp~vels-------~cg~i~g-e~P~  402 (445)
T KOG2139|consen  331 DLQEVTICAGQRLCCGEAQCLAWDPSGEYLAVIFKGQSFVLLCKLHISRFDTRKSPPVELS-------YCGMIGG-EYPA  402 (445)
T ss_pred             cchhhhhhcCcccccCccceeeECCCCCEEEEEEcCCchhhhhhhhhhhhcccccCceEEE-------ecccccC-CCCc
Confidence            010          145689999999999999975443        4667777653321111       0011111 1245


Q ss_pred             EEEEcc---CCCEEEEEeCCCcEEEEecc
Q psy10867        284 SLSCSI---TGITLLSSSADETLKIWHTI  309 (343)
Q Consensus       284 ~~~~s~---~~~~l~s~~~dg~i~iwd~~  309 (343)
                      .++|+|   ++.+|..+=..|.+.-|++.
T Consensus       403 ~IsF~pl~n~g~lLsiaWsTGriq~ypl~  431 (445)
T KOG2139|consen  403 YISFGPLKNEGRLLSIAWSTGRIQRYPLT  431 (445)
T ss_pred             eEEeeecccCCcEEEEEeccCceEeeeeE
Confidence            567766   56677777778888888763

>KOG1240|consensus

Probab=99.79  E-value=6.5e-17  Score=141.63  Aligned_cols=268  Identities=12%  Similarity=0.118  Sum_probs=187.3

Q ss_pred             EecCCceEEEEEecCCCCcceEEEEeCCc-eEEEEEcCCCeEEEEeCCCccc-------ceecccCCcceEEEEECCCCC
Q psy10867         20 WEPKGGTLLMSYKGASVLSPHSMCLLGND-YVLGVEKGKPMIQAWPVNSQEK-------AQLRLICPGRISSMQASPDAA   91 (343)
Q Consensus        20 wd~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~i~iw~~~~~~~-------~~~~~~~~~~v~~~~~s~~~~   91 (343)
                      |++ .|..+..+..|.. .+..++.++.. .++++|++||+|++|+...-..       ..++.....++.++.+.+.+.
T Consensus      1034 W~p-~G~lVAhL~Ehs~-~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~ 1111 (1431)
T KOG1240|consen 1034 WNP-RGILVAHLHEHSS-AVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGD 1111 (1431)
T ss_pred             CCc-cceEeehhhhccc-cccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCC
Confidence            775 6889999999998 88888888655 9999999999999999764221       122333567899999999998


Q ss_pred             EEEE-ecCCeEEEEEccCC--c-----eEEEeccc-CCCeE-EEEEec-CC-CEEEEecCCCeEEEeecCccceeeeeec
Q psy10867         92 YIAV-SIETKLHMWQISSG--R-----LLATASSH-YQPIT-IVKWSA-DS-NFIVTGGEDGTICVWQLSRLICKQTVAF  159 (343)
Q Consensus        92 ~l~~-~~d~~i~v~~~~~~--~-----~~~~~~~~-~~~v~-~~~~~~-~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~  159 (343)
                      .+|+ +.||.|++.+++..  +     .......+ .+.+. .-+|.. .. ..++.+...+.|..||++.....+..+ 
T Consensus      1112 ~~Av~t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk- 1190 (1431)
T KOG1240|consen 1112 QFAVSTKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLK- 1190 (1431)
T ss_pred             eEEEEcCCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhh-
Confidence            8886 68999999998752  1     11112222 23333 333433 23 378888889999999999876554332 


Q ss_pred             CCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeec--CCcEEEEEEcCC
Q psy10867        160 GIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLIL--DTRLTCVAFDGT  237 (343)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~--~~~i~~~~~~~~  237 (343)
                                         .....+.|++++.+|.+  ++++.|+..|.+.+||++-+.++..+.+  ..++..+..+|-
T Consensus      1191 -------------------~~~~hG~vTSi~idp~~--~WlviGts~G~l~lWDLRF~~~i~sw~~P~~~~i~~v~~~~~ 1249 (1431)
T KOG1240|consen 1191 -------------------NQLRHGLVTSIVIDPWC--NWLVIGTSRGQLVLWDLRFRVPILSWEHPARAPIRHVWLCPT 1249 (1431)
T ss_pred             -------------------cCccccceeEEEecCCc--eEEEEecCCceEEEEEeecCceeecccCcccCCcceEEeecc
Confidence                               12245789999999999  8999999999999999999998888775  456787777764


Q ss_pred             C---CEEEEE-c-CCCcEEEEEeecccccccccccCCCCCCccc--------cccCcEEEEEEccCCCEEEEEeCCCcEE
Q psy10867        238 E---DNIYMG-T-SEGVIKSFCLRQVPRTRDHHIQDSTSNPDFI--------GHEKQVTSLSCSITGITLLSSSADETLK  304 (343)
Q Consensus       238 ~---~~l~~~-~-~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~--------~~~~~v~~~~~s~~~~~l~s~~~dg~i~  304 (343)
                      .   ...+++ . ..+.|.+|++.++.....+...+..+.....        .+.-......+...+.++.+|+.|..|+
T Consensus      1250 ~~~~S~~vs~~~~~~nevs~wn~~~g~~~~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~~~~~~~ltggsd~kIR 1329 (1431)
T KOG1240|consen 1250 YPQESVSVSAGSSSNNEVSTWNMETGLRQTVLWASDGAPILSYALPSNDARKPDSLAGISCGVCEKNGFLLTGGSDMKIR 1329 (1431)
T ss_pred             CCCCceEEEecccCCCceeeeecccCcceEEEEcCCCCcchhhhcccccCCCCCcccceeeecccCCceeeecCCcccee
Confidence            3   344444 4 5789999999987655444333222211110        1112223334444566899999999999


Q ss_pred             EEecccc
Q psy10867        305 IWHTISR  311 (343)
Q Consensus       305 iwd~~~~  311 (343)
                      .||...-
T Consensus      1330 ~wD~~~p 1336 (1431)
T KOG1240|consen 1330 KWDPTRP 1336 (1431)
T ss_pred             eccCCCc
Confidence            9997643

>KOG1310|consensus

Probab=99.79  E-value=3e-18  Score=137.90  Aligned_cols=222  Identities=12%  Similarity=0.092  Sum_probs=164.7

Q ss_pred             EEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCccccee-cccCCcceEEEEECC--CCCEEEE-ecCCeEE
Q psy10867         27 LLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQL-RLICPGRISSMQASP--DAAYIAV-SIETKLH  102 (343)
Q Consensus        27 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~-~~~~~~~v~~~~~s~--~~~~l~~-~~d~~i~  102 (343)
                      +.+.+.+|.+ -|.|++|+.+|.+|++|++|-.+.|||.-..+.+.. ..+|...|.++.|-|  +.+++++ +.|..|+
T Consensus        42 lE~eL~GH~G-CVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~  120 (758)
T KOG1310|consen   42 LEAELTGHTG-CVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIK  120 (758)
T ss_pred             hhhhhccccc-eecceeecCCCCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEeccCcceEE
Confidence            3456889999 999999999999999999999999999987776643 448999999999998  3455665 5789999


Q ss_pred             EEEccCC----------ceEEEecccCCCeEEEEEecCC-CEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCcccc
Q psy10867        103 MWQISSG----------RLLATASSHYQPITIVKWSADS-NFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTG  171 (343)
Q Consensus       103 v~~~~~~----------~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  171 (343)
                      ++|+...          +....+..|...|..++-.|++ +.+.++++||+|+-+|++....-..-.            .
T Consensus       121 lfdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~c~p~~------------~  188 (758)
T KOG1310|consen  121 LFDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHVCNPDE------------D  188 (758)
T ss_pred             EEecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCCccCCccc------------c
Confidence            9999742          3344566799999999999987 789999999999999999742211000            0


Q ss_pred             ccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCC--------c----------eEEEee--c------
Q psy10867        172 LTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTG--------E----------DLLSLI--L------  225 (343)
Q Consensus       172 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~--------~----------~~~~~~--~------  225 (343)
                      ....+..+...--...++.++|..+ .+|+.|+.|-..++||.+..        .          ++..+.  |      
T Consensus       189 ~~~~l~ny~~~lielk~ltisp~rp-~~laVGgsdpfarLYD~Rr~lks~~s~~~~~~~pp~~~~cv~yf~p~hlkn~~g  267 (758)
T KOG1310|consen  189 CPSILVNYNPQLIELKCLTISPSRP-YYLAVGGSDPFARLYDRRRVLKSFRSDGTMNTCPPKDCRCVRYFSPGHLKNSQG  267 (758)
T ss_pred             ccHHHHHhchhhheeeeeeecCCCC-ceEEecCCCchhhhhhhhhhccCCCCCccccCCCCcccchhheecCccccCccc
Confidence            0001111112224567899999876 89999999999999995321        1          122221  1      


Q ss_pred             -----CCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccc
Q psy10867        226 -----DTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTR  262 (343)
Q Consensus       226 -----~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~  262 (343)
                           ...++-+.|+|+|..|++.-....|+++|+...+...
T Consensus       268 n~~~~~~~~t~vtfnpNGtElLvs~~gEhVYlfdvn~~~~~~  309 (758)
T KOG1310|consen  268 NLDRYITCCTYVTFNPNGTELLVSWGGEHVYLFDVNEDKSPT  309 (758)
T ss_pred             ccccceeeeEEEEECCCCcEEEEeeCCeEEEEEeecCCCCce
Confidence                 0125667899999999988888899999998765543

>KOG2111|consensus

Probab=99.79  E-value=1.2e-16  Score=120.33  Aligned_cols=223  Identities=13%  Similarity=0.191  Sum_probs=158.7

Q ss_pred             ceEEEEECCCCCEEEEecCCeEEEEEccCCceEEEecccCCC--eEEEEEecCCCEEEE-ecC------CCeEEEeecCc
Q psy10867         80 RISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQP--ITIVKWSADSNFIVT-GGE------DGTICVWQLSR  150 (343)
Q Consensus        80 ~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~~~~~~--v~~~~~~~~~~~l~s-~~~------dg~i~iwd~~~  150 (343)
                      ....++|+.|..-++++.|...+||+.+--+.......+.+.  +..+-|  ..++++- |+.      -..|.|||=..
T Consensus         7 ~~lsvs~NQD~ScFava~~~Gfriyn~~P~ke~~~r~~~~~G~~~veMLf--R~N~laLVGGg~~pky~pNkviIWDD~k   84 (346)
T KOG2111|consen    7 KTLSVSFNQDHSCFAVATDTGFRIYNCDPFKESASRQFIDGGFKIVEMLF--RSNYLALVGGGSRPKYPPNKVIIWDDLK   84 (346)
T ss_pred             ceeEEEEccCCceEEEEecCceEEEecCchhhhhhhccccCchhhhhHhh--hhceEEEecCCCCCCCCCceEEEEeccc
Confidence            345699999999999999999999998753332222222222  222223  3344443 332      24699999555


Q ss_pred             cceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecC-CCceEEEeec---C
Q psy10867        151 LICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLC-TGEDLLSLIL---D  226 (343)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~-~~~~~~~~~~---~  226 (343)
                      ..++.++                       ....+|.++.+.++.    ++.. ..+.|++|... +.+.+..+..   +
T Consensus        85 ~~~i~el-----------------------~f~~~I~~V~l~r~r----iVvv-l~~~I~VytF~~n~k~l~~~et~~NP  136 (346)
T KOG2111|consen   85 ERCIIEL-----------------------SFNSEIKAVKLRRDR----IVVV-LENKIYVYTFPDNPKLLHVIETRSNP  136 (346)
T ss_pred             CcEEEEE-----------------------EeccceeeEEEcCCe----EEEE-ecCeEEEEEcCCChhheeeeecccCC
Confidence            4433333                       256789999999863    4433 36789999987 5666666653   4


Q ss_pred             CcEEEEEEcCCCCEEEE-EcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCc-EE
Q psy10867        227 TRLTCVAFDGTEDNIYM-GTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADET-LK  304 (343)
Q Consensus       227 ~~i~~~~~~~~~~~l~~-~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~-i~  304 (343)
                      ....+++-..+..+|+. |-.-|.|+|-|+......         ....+.+|...|.+++++.+|..+||+|..|+ ||
T Consensus       137 kGlC~~~~~~~k~~LafPg~k~GqvQi~dL~~~~~~---------~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIR  207 (346)
T KOG2111|consen  137 KGLCSLCPTSNKSLLAFPGFKTGQVQIVDLASTKPN---------APSIINAHDSDIACVALNLQGTLVATASTKGTLIR  207 (346)
T ss_pred             CceEeecCCCCceEEEcCCCccceEEEEEhhhcCcC---------CceEEEcccCceeEEEEcCCccEEEEeccCcEEEE
Confidence            44555544444455555 566899999999875431         13457899999999999999999999999996 69


Q ss_pred             EEecccceeeeecc---cCCceEEEEEccCCCeeeecccC
Q psy10867        305 IWHTISRQCLRTIQ---HKGPVLGAFLGLLPPAIHDYDFT  341 (343)
Q Consensus       305 iwd~~~~~~~~~~~---~~~~v~~~~~sp~~~~l~~~~~~  341 (343)
                      |||..+|+.+.+++   ....|.+++|||+..+|++++-+
T Consensus       208 IFdt~~g~~l~E~RRG~d~A~iy~iaFSp~~s~LavsSdK  247 (346)
T KOG2111|consen  208 IFDTEDGTLLQELRRGVDRADIYCIAFSPNSSWLAVSSDK  247 (346)
T ss_pred             EEEcCCCcEeeeeecCCchheEEEEEeCCCccEEEEEcCC
Confidence            99999999999998   56789999999999999998754

>KOG4227|consensus

Probab=99.79  E-value=5.9e-17  Score=125.45  Aligned_cols=248  Identities=13%  Similarity=0.143  Sum_probs=178.0

Q ss_pred             eecccCCcceEEEEECCCCCEEEE-ecCCeEEEEEccC------CceEEEec-ccCCCeEEEEEecCCCEEEEecCCCeE
Q psy10867         72 QLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQISS------GRLLATAS-SHYQPITIVKWSADSNFIVTGGEDGTI  143 (343)
Q Consensus        72 ~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~------~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~~~dg~i  143 (343)
                      +-+.+|.+.|+++.|+.++++|++ |.|..+++|.++.      .+++.... .|...|.|++|......+++|..+++|
T Consensus        50 KD~~~H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~~V  129 (609)
T KOG4227|consen   50 KDVREHTGCINALQFSHNDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERWGTV  129 (609)
T ss_pred             hhhhhhccccceeeeccCCeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCCCccee
Confidence            345589999999999999999998 5778999999863      34555444 356899999999888999999999999


Q ss_pred             EEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCc----e
Q psy10867        144 CVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGE----D  219 (343)
Q Consensus       144 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~----~  219 (343)
                      .+.|+.+.+.+...                    ......+.|+.+..+|..  +.+++.+.++.+.+||.+...    +
T Consensus       130 I~HDiEt~qsi~V~--------------------~~~~~~~~VY~m~~~P~D--N~~~~~t~~~~V~~~D~Rd~~~~~~~  187 (609)
T KOG4227|consen  130 IKHDIETKQSIYVA--------------------NENNNRGDVYHMDQHPTD--NTLIVVTRAKLVSFIDNRDRQNPISL  187 (609)
T ss_pred             Eeeecccceeeeee--------------------cccCcccceeecccCCCC--ceEEEEecCceEEEEeccCCCCCCce
Confidence            99999986543321                    112234589999999997  899999999999999998765    2


Q ss_pred             EEEeecCCcEEEEEEcCCC-CEEEEEcCCCcEEEEEeeccccccccc------------------ccCCCCCC-------
Q psy10867        220 LLSLILDTRLTCVAFDGTE-DNIYMGTSEGVIKSFCLRQVPRTRDHH------------------IQDSTSNP-------  273 (343)
Q Consensus       220 ~~~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~------------------~~~~~~~~-------  273 (343)
                      +.....+.....+.|+|.. .+|++.+..+-+-+||.+.........                  ...+....       
T Consensus       188 ~~~AN~~~~F~t~~F~P~~P~Li~~~~~~~G~~~~D~R~~~~~~~~~~~~~~L~~~~~~~M~~~~~~~G~Q~msiRR~~~  267 (609)
T KOG4227|consen  188 VLPANSGKNFYTAEFHPETPALILVNSETGGPNVFDRRMQARPVYQRSMFKGLPQENTEWMGSLWSPSGNQFMSIRRGKC  267 (609)
T ss_pred             eeecCCCccceeeeecCCCceeEEeccccCCCCceeeccccchHHhhhccccCcccchhhhheeeCCCCCeehhhhccCC
Confidence            2222356778999999976 467778888899999988643321000                  00011000       


Q ss_pred             ------------ccc-cccC-------cEEEEEEccCCCEEEEEeCCCcEEEEecccc----------------------
Q psy10867        274 ------------DFI-GHEK-------QVTSLSCSITGITLLSSSADETLKIWHTISR----------------------  311 (343)
Q Consensus       274 ------------~~~-~~~~-------~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~----------------------  311 (343)
                                  .++ .|+.       .+.+++|-.| ..+++|+.+-.|++|.+...                      
T Consensus       268 P~~~D~~S~R~~V~k~D~N~~GY~N~~T~KS~~F~~D-~~v~tGSD~~~i~~WklP~~~ds~G~~~IG~~~~~~~~~~~i  346 (609)
T KOG4227|consen  268 PLYFDFISQRCFVLKSDHNPNGYCNIKTIKSMTFIDD-YTVATGSDHWGIHIWKLPRANDSYGFTQIGHDEEEMPSEIFI  346 (609)
T ss_pred             CEEeeeecccceeEeccCCCCcceeeeeeeeeeeecc-eeeeccCcccceEEEecCCCccccCccccCcchhhCchhhee
Confidence                        011 1211       2455666544 44899999999999987521                      


Q ss_pred             -eeeeecc-cCCceEEEEEccCCCeeeecccCC
Q psy10867        312 -QCLRTIQ-HKGPVLGAFLGLLPPAIHDYDFTP  342 (343)
Q Consensus       312 -~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~~~  342 (343)
                       +.+..++ |..-+..+.|+|....|+++++++
T Consensus       347 ~~~~~VLrGHRSv~NQVRF~~H~~~l~SSGVE~  379 (609)
T KOG4227|consen  347 EKELTVLRGHRSVPNQVRFSQHNNLLVSSGVEN  379 (609)
T ss_pred             cceeEEEecccccccceeecCCcceEeccchhh
Confidence             1223345 778889999999999999887754

>PRK02889 tolB translocation protein TolB; Provisional

Probab=99.79  E-value=1.6e-16  Score=134.04  Aligned_cols=243  Identities=16%  Similarity=0.083  Sum_probs=154.0

Q ss_pred             eEEEecCC--CCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcC---CCeEEEEeCCCcccceecccCCcc
Q psy10867          6 EVAFSYDG--SGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKG---KPMIQAWPVNSQEKAQLRLICPGR   80 (343)
Q Consensus         6 ~~~~s~~~--dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~---~~~i~iw~~~~~~~~~~~~~~~~~   80 (343)
                      .++|....  ...|.++|. .|...+.+..+.. .+.+.+|+|||+.++..+.   ...|.+||+.+++.... ....+.
T Consensus       165 ~iayv~~~~~~~~L~~~D~-dG~~~~~l~~~~~-~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~l-~~~~g~  241 (427)
T PRK02889        165 RIAYVIKTGNRYQLQISDA-DGQNAQSALSSPE-PIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRVV-ANFKGS  241 (427)
T ss_pred             EEEEEEccCCccEEEEECC-CCCCceEeccCCC-CcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEEe-ecCCCC
Confidence            45555443  356778887 4555555666666 8899999999977765543   24699999998875443 234456


Q ss_pred             eEEEEECCCCCEEEE--ecCCe--EEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecC-CCeEEEeecC--ccce
Q psy10867         81 ISSMQASPDAAYIAV--SIETK--LHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGE-DGTICVWQLS--RLIC  153 (343)
Q Consensus        81 v~~~~~s~~~~~l~~--~~d~~--i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-dg~i~iwd~~--~~~~  153 (343)
                      +...+|+|||+.|+.  +.++.  |+++|+.++. ...+..+........|+|||+.|+..+. +|...+|.+.  ++..
T Consensus       242 ~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~-~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~~  320 (427)
T PRK02889        242 NSAPAWSPDGRTLAVALSRDGNSQIYTVNADGSG-LRRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGAA  320 (427)
T ss_pred             ccceEECCCCCEEEEEEccCCCceEEEEECCCCC-cEECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCce
Confidence            678999999998874  45665  4455555544 4555556556677899999998876554 4666666553  3211


Q ss_pred             eeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCC---eEEEEecCCCceEEEeecCCcEE
Q psy10867        154 KQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDR---TCKIFDLCTGEDLLSLILDTRLT  230 (343)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~---~i~~wd~~~~~~~~~~~~~~~i~  230 (343)
                                             ..+...........|+|+|  ++++..+.++   .|.+||+.+++... +.......
T Consensus       321 -----------------------~~lt~~g~~~~~~~~SpDG--~~Ia~~s~~~g~~~I~v~d~~~g~~~~-lt~~~~~~  374 (427)
T PRK02889        321 -----------------------QRVTFTGSYNTSPRISPDG--KLLAYISRVGGAFKLYVQDLATGQVTA-LTDTTRDE  374 (427)
T ss_pred             -----------------------EEEecCCCCcCceEECCCC--CEEEEEEccCCcEEEEEEECCCCCeEE-ccCCCCcc
Confidence                                   1111122233467899999  6777665543   69999998876543 33333456


Q ss_pred             EEEEcCCCCEEEEEcCCC-c--EEEEEeecccccccccccCCCCCCccccccCcEEEEEEccC
Q psy10867        231 CVAFDGTEDNIYMGTSEG-V--IKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSIT  290 (343)
Q Consensus       231 ~~~~~~~~~~l~~~~~d~-~--i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~  290 (343)
                      ...|+|+++.|+.++.++ .  +++.++...            ....+..+.+.+...+|+|-
T Consensus       375 ~p~~spdg~~l~~~~~~~g~~~l~~~~~~g~------------~~~~l~~~~g~~~~p~wsp~  425 (427)
T PRK02889        375 SPSFAPNGRYILYATQQGGRSVLAAVSSDGR------------IKQRLSVQGGDVREPSWGPF  425 (427)
T ss_pred             CceECCCCCEEEEEEecCCCEEEEEEECCCC------------ceEEeecCCCCCCCCccCCC
Confidence            789999999988876544 2  444444221            12223345556667777763

>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3

Probab=99.78  E-value=5.9e-14  Score=115.25  Aligned_cols=286  Identities=13%  Similarity=0.130  Sum_probs=181.3

Q ss_pred             CCeEEEEec--CCceEE--EEEecCCCCcceEEEEeCCceEEEEEcC----CCeEEEEeCCCc--ccc--eecccCCcce
Q psy10867         14 SGAISVWEP--KGGTLL--MSYKGASVLSPHSMCLLGNDYVLGVEKG----KPMIQAWPVNSQ--EKA--QLRLICPGRI   81 (343)
Q Consensus        14 dg~i~iwd~--~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~~~----~~~i~iw~~~~~--~~~--~~~~~~~~~v   81 (343)
                      .+.|.+|++  .+++..  ..+... . ....++++|++.+|.+...    ++.|..|.+...  +..  ..........
T Consensus        12 ~~gI~~~~~d~~~g~l~~~~~~~~~-~-~Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~~~~~g~~p   89 (345)
T PF10282_consen   12 GGGIYVFRFDEETGTLTLVQTVAEG-E-NPSWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNSVPSGGSSP   89 (345)
T ss_dssp             STEEEEEEEETTTTEEEEEEEEEES-S-SECCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEEEEEESSSCE
T ss_pred             CCcEEEEEEcCCCCCceEeeeecCC-C-CCceEEEEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEeeeeccCCCCc
Confidence            478999887  555543  333222 2 6788999999877766644    579999987764  322  2222234455


Q ss_pred             EEEEECCCCCEEEEe--cCCeEEEEEccC-CceEEE---ec----------ccCCCeEEEEEecCCCEEEEecC-CCeEE
Q psy10867         82 SSMQASPDAAYIAVS--IETKLHMWQISS-GRLLAT---AS----------SHYQPITIVKWSADSNFIVTGGE-DGTIC  144 (343)
Q Consensus        82 ~~~~~s~~~~~l~~~--~d~~i~v~~~~~-~~~~~~---~~----------~~~~~v~~~~~~~~~~~l~s~~~-dg~i~  144 (343)
                      ..++++|++++|+++  .+|.|.++++.. |.+...   +.          .......++.++|+++++++... ...|.
T Consensus        90 ~~i~~~~~g~~l~vany~~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~D~v~  169 (345)
T PF10282_consen   90 CHIAVDPDGRFLYVANYGGGSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLGADRVY  169 (345)
T ss_dssp             EEEEECTTSSEEEEEETTTTEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETTTTEEE
T ss_pred             EEEEEecCCCEEEEEEccCCeEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecCCCEEE
Confidence            679999999998874  578999999987 433222   11          12245789999999998877643 45799


Q ss_pred             EeecCccce-eeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecC--CCc--e
Q psy10867        145 VWQLSRLIC-KQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLC--TGE--D  219 (343)
Q Consensus       145 iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~--~~~--~  219 (343)
                      +|++..... +..                  ............+.+.|+|+++ ...++...++.|.++++.  +++  .
T Consensus       170 ~~~~~~~~~~l~~------------------~~~~~~~~G~GPRh~~f~pdg~-~~Yv~~e~s~~v~v~~~~~~~g~~~~  230 (345)
T PF10282_consen  170 VYDIDDDTGKLTP------------------VDSIKVPPGSGPRHLAFSPDGK-YAYVVNELSNTVSVFDYDPSDGSLTE  230 (345)
T ss_dssp             EEEE-TTS-TEEE------------------EEEEECSTTSSEEEEEE-TTSS-EEEEEETTTTEEEEEEEETTTTEEEE
T ss_pred             EEEEeCCCceEEE------------------eeccccccCCCCcEEEEcCCcC-EEEEecCCCCcEEEEeecccCCceeE
Confidence            999976541 110                  0111223456688999999984 344555668999999988  332  2


Q ss_pred             EEEeec-------CCcEEEEEEcCCCCEEEEEcC-CCcEEEEEeeccc-ccccccccCCCCCCccccccCcEEEEEEccC
Q psy10867        220 LLSLIL-------DTRLTCVAFDGTEDNIYMGTS-EGVIKSFCLRQVP-RTRDHHIQDSTSNPDFIGHEKQVTSLSCSIT  290 (343)
Q Consensus       220 ~~~~~~-------~~~i~~~~~~~~~~~l~~~~~-d~~i~i~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~  290 (343)
                      +..+..       ......++++|+|++|+++.. .+.|.+|++.... ....        +..+.........++++|+
T Consensus       231 ~~~~~~~~~~~~~~~~~~~i~ispdg~~lyvsnr~~~sI~vf~~d~~~g~l~~--------~~~~~~~G~~Pr~~~~s~~  302 (345)
T PF10282_consen  231 IQTISTLPEGFTGENAPAEIAISPDGRFLYVSNRGSNSISVFDLDPATGTLTL--------VQTVPTGGKFPRHFAFSPD  302 (345)
T ss_dssp             EEEEESCETTSCSSSSEEEEEE-TTSSEEEEEECTTTEEEEEEECTTTTTEEE--------EEEEEESSSSEEEEEE-TT
T ss_pred             EEEeeeccccccccCCceeEEEecCCCEEEEEeccCCEEEEEEEecCCCceEE--------EEEEeCCCCCccEEEEeCC
Confidence            222221       125789999999999988764 6789999995421 1111        2223333445889999999


Q ss_pred             CCEEEEEe-CCCcEEEEec--ccceeeeecc--cCCceEEEEE
Q psy10867        291 GITLLSSS-ADETLKIWHT--ISRQCLRTIQ--HKGPVLGAFL  328 (343)
Q Consensus       291 ~~~l~s~~-~dg~i~iwd~--~~~~~~~~~~--~~~~v~~~~~  328 (343)
                      |++|+++. .++.|.+|++  ++|.+...-.  .-....|+.|
T Consensus       303 g~~l~Va~~~s~~v~vf~~d~~tG~l~~~~~~~~~~~p~ci~f  345 (345)
T PF10282_consen  303 GRYLYVANQDSNTVSVFDIDPDTGKLTPVGSSVPIPSPVCIVF  345 (345)
T ss_dssp             SSEEEEEETTTTEEEEEEEETTTTEEEEEEEEEESSSEEEEEE
T ss_pred             CCEEEEEecCCCeEEEEEEeCCCCcEEEecccccCCCCEEEeC
Confidence            99998776 5578999876  4666554432  4455666665

1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.

>KOG1240|consensus

Probab=99.77  E-value=4.1e-16  Score=136.78  Aligned_cols=281  Identities=14%  Similarity=0.167  Sum_probs=188.2

Q ss_pred             ceEEEecCCCCeEEEEecCCc-------eEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCccc-------
Q psy10867          5 NEVAFSYDGSGAISVWEPKGG-------TLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEK-------   70 (343)
Q Consensus         5 ~~~~~s~~~dg~i~iwd~~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~-------   70 (343)
                      +.+.+|++.||+|++||...-       +...++..... .+.++...+.+..+|.++.||.|++.+++-...       
T Consensus      1061 ~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~s-r~~~vt~~~~~~~~Av~t~DG~v~~~~id~~~~~~~~~~~ 1139 (1431)
T KOG1240|consen 1061 TSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGS-RVEKVTMCGNGDQFAVSTKDGSVRVLRIDHYNVSKRVATQ 1139 (1431)
T ss_pred             CceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCC-ceEEEEeccCCCeEEEEcCCCeEEEEEccccccccceeee
Confidence            478889999999999998641       22334444445 889999999999999999999999998876211       


Q ss_pred             ceecc-cCCcceE-EEEECCC-CC-EEE-EecCCeEEEEEccCCceEEEec--ccCCCeEEEEEecCCCEEEEecCCCeE
Q psy10867         71 AQLRL-ICPGRIS-SMQASPD-AA-YIA-VSIETKLHMWQISSGRLLATAS--SHYQPITIVKWSADSNFIVTGGEDGTI  143 (343)
Q Consensus        71 ~~~~~-~~~~~v~-~~~~s~~-~~-~l~-~~~d~~i~v~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~s~~~dg~i  143 (343)
                      .+... ...+.+. .-+|... +. .|+ +...+.|..||+.......+++  ...+.|++++.+|.+.++++|+..|.+
T Consensus      1140 ~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~~~~hG~vTSi~idp~~~WlviGts~G~l 1219 (1431)
T KOG1240|consen 1140 VRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKNQLRHGLVTSIVIDPWCNWLVIGTSRGQL 1219 (1431)
T ss_pred             eecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhhcCccccceeEEEecCCceEEEEecCCceE
Confidence            11111 1223333 3344332 23 444 4567899999998776555444  234789999999999999999999999


Q ss_pred             EEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCC--ceEEEEee-CCCeEEEEecCCCceE
Q psy10867        144 CVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGA--KSRVASVS-HDRTCKIFDLCTGEDL  220 (343)
Q Consensus       144 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~~l~~~~-~d~~i~~wd~~~~~~~  220 (343)
                      .+||++-+..+....                     .++..+++.+..+|-.+  .-.+.+++ ..+.+.+|++.+|.+.
T Consensus      1220 ~lWDLRF~~~i~sw~---------------------~P~~~~i~~v~~~~~~~~~S~~vs~~~~~~nevs~wn~~~g~~~ 1278 (1431)
T KOG1240|consen 1220 VLWDLRFRVPILSWE---------------------HPARAPIRHVWLCPTYPQESVSVSAGSSSNNEVSTWNMETGLRQ 1278 (1431)
T ss_pred             EEEEeecCceeeccc---------------------CcccCCcceEEeeccCCCCceEEEecccCCCceeeeecccCcce
Confidence            999999765443322                     23557788888877543  12344444 5788999999998766


Q ss_pred             EEeecCC--------------------cEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccc----------------
Q psy10867        221 LSLILDT--------------------RLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDH----------------  264 (343)
Q Consensus       221 ~~~~~~~--------------------~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~----------------  264 (343)
                      ..+....                    .....++...+..+++|+.|..|+.||..........                
T Consensus      1279 ~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~~~~~~~ltggsd~kIR~wD~~~p~~ss~~~~~~s~~~~~~~~s~~ 1358 (1431)
T KOG1240|consen 1279 TVLWASDGAPILSYALPSNDARKPDSLAGISCGVCEKNGFLLTGGSDMKIRKWDPTRPEISSYAVPGPSTSYSTNSESYD 1358 (1431)
T ss_pred             EEEEcCCCCcchhhhcccccCCCCCcccceeeecccCCceeeecCCccceeeccCCCcccccccccCccccccccchhcc
Confidence            5553220                    1122334444678899999999999998765443100                


Q ss_pred             -c-ccC---------------------------CCCCCccccccCcEEEEEEccCC-CEEEEEeCCCcEEEEe
Q psy10867        265 -H-IQD---------------------------STSNPDFIGHEKQVTSLSCSITG-ITLLSSSADETLKIWH  307 (343)
Q Consensus       265 -~-~~~---------------------------~~~~~~~~~~~~~v~~~~~s~~~-~~l~s~~~dg~i~iwd  307 (343)
                       . +..                           ..+...-..|..+|+++++-... .+|++++.||.|++|.
T Consensus      1359 ~~~i~~~~~i~e~i~~~~tv~~t~~~~~~~~~~~~~~~ps~~H~d~Itdma~~~~~q~llvs~s~dG~IkiWk 1431 (1431)
T KOG1240|consen 1359 LSTIPGSQFIDEFIIYQQTVGLTEALRENQKLRPGPSDPSTYHHDPITDMATLKSEQPLLVSSSRDGVIKIWK 1431 (1431)
T ss_pred             ccccCCCccchhhhhhhhhcCchhhcccccccccCCCCCcccccchhhhhhhhccCccEEEEecCCCeeeecC
Confidence             0 000                           00011122577889998875543 5889999999999994

>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB

Probab=99.75  E-value=3.3e-15  Score=126.92  Aligned_cols=230  Identities=17%  Similarity=0.065  Sum_probs=149.2

Q ss_pred             CeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEEe-c---CCeEEEEEccCCceEEEecccCCCeEEEEEecCCCE
Q psy10867         58 PMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVS-I---ETKLHMWQISSGRLLATASSHYQPITIVKWSADSNF  133 (343)
Q Consensus        58 ~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~---d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  133 (343)
                      ..|.++|...... +.+..+...+...+|+|||++|+.. .   ...|++||+.+++... +..+.+.+.+++|+||++.
T Consensus       170 ~~l~~~d~~g~~~-~~l~~~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~-~~~~~~~~~~~~~spDg~~  247 (417)
T TIGR02800       170 YELQVADYDGANP-QTITRSREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQREK-VASFPGMNGAPAFSPDGSK  247 (417)
T ss_pred             ceEEEEcCCCCCC-EEeecCCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEE-eecCCCCccceEECCCCCE
Confidence            3678888765443 3344566678899999999998863 2   2479999998886543 3345566778999999987


Q ss_pred             EEE-ecCCC--eEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeC-CC--
Q psy10867        134 IVT-GGEDG--TICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSH-DR--  207 (343)
Q Consensus       134 l~s-~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~-d~--  207 (343)
                      |+. .+.++  .|.+||+.++..                       ..+..+........|+|++  +.|+..+. ++  
T Consensus       248 l~~~~~~~~~~~i~~~d~~~~~~-----------------------~~l~~~~~~~~~~~~s~dg--~~l~~~s~~~g~~  302 (417)
T TIGR02800       248 LAVSLSKDGNPDIYVMDLDGKQL-----------------------TRLTNGPGIDTEPSWSPDG--KSIAFTSDRGGSP  302 (417)
T ss_pred             EEEEECCCCCccEEEEECCCCCE-----------------------EECCCCCCCCCCEEECCCC--CEEEEEECCCCCc
Confidence            764 44444  588888876532                       2222333444567899998  56655443 33  


Q ss_pred             eEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcCCC---cEEEEEeecccccccccccCCCCCCccccccCcEEE
Q psy10867        208 TCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEG---VIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTS  284 (343)
Q Consensus       208 ~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~---~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  284 (343)
                      .|+++|+.+++.............+.|+|++++++.+..++   .|.+||+......            .+.. ......
T Consensus       303 ~iy~~d~~~~~~~~l~~~~~~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~~~~~------------~l~~-~~~~~~  369 (417)
T TIGR02800       303 QIYMMDADGGEVRRLTFRGGYNASPSWSPDGDLIAFVHREGGGFNIAVMDLDGGGER------------VLTD-TGLDES  369 (417)
T ss_pred             eEEEEECCCCCEEEeecCCCCccCeEECCCCCEEEEEEccCCceEEEEEeCCCCCeE------------EccC-CCCCCC
Confidence            68888888776543333555677889999999999887765   7888887653211            1111 112334


Q ss_pred             EEEccCCCEEEEEeCCC---cEEEEecccceeeeecc-cCCceEEEEE
Q psy10867        285 LSCSITGITLLSSSADE---TLKIWHTISRQCLRTIQ-HKGPVLGAFL  328 (343)
Q Consensus       285 ~~~s~~~~~l~s~~~dg---~i~iwd~~~~~~~~~~~-~~~~v~~~~~  328 (343)
                      ..|+||++.|+..+.++   .+++.+. +++....+. +.+.+..++|
T Consensus       370 p~~spdg~~l~~~~~~~~~~~l~~~~~-~g~~~~~~~~~~g~~~~~~w  416 (417)
T TIGR02800       370 PSFAPNGRMILYATTRGGRGVLGLVST-DGRFRARLPLGNGDVREPAW  416 (417)
T ss_pred             ceECCCCCEEEEEEeCCCcEEEEEEEC-CCceeeECCCCCCCcCCCCC
Confidence            68999999888776654   3555553 455555554 4445555554

The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.

>PRK00178 tolB translocation protein TolB; Provisional

Probab=99.75  E-value=4.2e-15  Score=126.39  Aligned_cols=232  Identities=16%  Similarity=0.107  Sum_probs=149.1

Q ss_pred             eEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-ecC---CeEEEEEccCCceEEEecccCCCeEEEEEecCCCEE
Q psy10867         59 MIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SIE---TKLHMWQISSGRLLATASSHYQPITIVKWSADSNFI  134 (343)
Q Consensus        59 ~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d---~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  134 (343)
                      .|.++|.+.+.. +.+..+...+...+|+|||+.|+. +.+   ..|.+|++.+++... +....+.+....|+|||+.|
T Consensus       180 ~l~~~d~~g~~~-~~l~~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~-l~~~~g~~~~~~~SpDG~~l  257 (430)
T PRK00178        180 TLQRSDYDGARA-VTLLQSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQ-ITNFEGLNGAPAWSPDGSKL  257 (430)
T ss_pred             EEEEECCCCCCc-eEEecCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEE-ccCCCCCcCCeEECCCCCEE
Confidence            477778876554 334456678899999999998875 322   379999998886543 33334455678999999987


Q ss_pred             E-EecCCC--eEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEee-CC--Ce
Q psy10867        135 V-TGGEDG--TICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVS-HD--RT  208 (343)
Q Consensus       135 ~-s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~-~d--~~  208 (343)
                      + +...+|  .|.++|+.++..                       ..+..+........|+|++  +.++..+ .+  ..
T Consensus       258 a~~~~~~g~~~Iy~~d~~~~~~-----------------------~~lt~~~~~~~~~~~spDg--~~i~f~s~~~g~~~  312 (430)
T PRK00178        258 AFVLSKDGNPEIYVMDLASRQL-----------------------SRVTNHPAIDTEPFWGKDG--RTLYFTSDRGGKPQ  312 (430)
T ss_pred             EEEEccCCCceEEEEECCCCCe-----------------------EEcccCCCCcCCeEECCCC--CEEEEEECCCCCce
Confidence            7 444455  588889887532                       2233344455677899998  5555444 33  35


Q ss_pred             EEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcCC-C--cEEEEEeecccccccccccCCCCCCccccccCcEEEE
Q psy10867        209 CKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSE-G--VIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSL  285 (343)
Q Consensus       209 i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-~--~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  285 (343)
                      |+++|+.+++...............|+|+|++++....+ +  .|.++|+.+.....         +..    .......
T Consensus       313 iy~~d~~~g~~~~lt~~~~~~~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~tg~~~~---------lt~----~~~~~~p  379 (430)
T PRK00178        313 IYKVNVNGGRAERVTFVGNYNARPRLSADGKTLVMVHRQDGNFHVAAQDLQRGSVRI---------LTD----TSLDESP  379 (430)
T ss_pred             EEEEECCCCCEEEeecCCCCccceEECCCCCEEEEEEccCCceEEEEEECCCCCEEE---------ccC----CCCCCCc
Confidence            777888777643322223334567899999999876543 3  47788877643211         111    1111245


Q ss_pred             EEccCCCEEEEEeCC---CcEEEEecccceeeeecc-cCCceEEEEEccC
Q psy10867        286 SCSITGITLLSSSAD---ETLKIWHTISRQCLRTIQ-HKGPVLGAFLGLL  331 (343)
Q Consensus       286 ~~s~~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~  331 (343)
                      .|+|||+.++..+.+   ..|.++++. +.....+. +.+.+...+|+|-
T Consensus       380 ~~spdg~~i~~~~~~~g~~~l~~~~~~-g~~~~~l~~~~g~~~~p~ws~~  428 (430)
T PRK00178        380 SVAPNGTMLIYATRQQGRGVLMLVSIN-GRVRLPLPTAQGEVREPSWSPY  428 (430)
T ss_pred             eECCCCCEEEEEEecCCceEEEEEECC-CCceEECcCCCCCcCCCccCCC
Confidence            899999988766543   346777764 44444554 5567788888874

>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins

Probab=99.74  E-value=5.5e-16  Score=115.51  Aligned_cols=159  Identities=16%  Similarity=0.284  Sum_probs=109.7

Q ss_pred             EEEEEecCCCEEEEecC----------CCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeec-ccccceEEEEe
Q psy10867        123 TIVKWSADSNFIVTGGE----------DGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKS-QHSLPVTHVTL  191 (343)
Q Consensus       123 ~~~~~~~~~~~l~s~~~----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~  191 (343)
                      ..+.|+|+|++|+.-..          -+...+|.++....                     +...+. ...++|.+++|
T Consensus         9 ~~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~---------------------~~~~i~l~~~~~I~~~~W   67 (194)
T PF08662_consen    9 AKLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNI---------------------PVESIELKKEGPIHDVAW   67 (194)
T ss_pred             EEEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCC---------------------ccceeeccCCCceEEEEE
Confidence            46889999987665332          23455565543211                     222222 23457999999


Q ss_pred             ecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcC---CCcEEEEEeecccccccccccC
Q psy10867        192 SKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTS---EGVIKSFCLRQVPRTRDHHIQD  268 (343)
Q Consensus       192 ~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~---d~~i~i~d~~~~~~~~~~~~~~  268 (343)
                      +|+++.-.++.|..++.+.+||++ ++.+..+. ...+..+.|+|+|++|++++.   .|.|.+||.++.+...      
T Consensus        68 sP~g~~favi~g~~~~~v~lyd~~-~~~i~~~~-~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~~i~------  139 (194)
T PF08662_consen   68 SPNGNEFAVIYGSMPAKVTLYDVK-GKKIFSFG-TQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKKKIS------  139 (194)
T ss_pred             CcCCCEEEEEEccCCcccEEEcCc-ccEeEeec-CCCceEEEECCCCCEEEEEEccCCCcEEEEEECCCCEEee------
Confidence            999941123345567899999996 66666654 567789999999999999864   4679999999654432      


Q ss_pred             CCCCCccccccCcEEEEEEccCCCEEEEEeC------CCcEEEEecccceeeeecc
Q psy10867        269 STSNPDFIGHEKQVTSLSCSITGITLLSSSA------DETLKIWHTISRQCLRTIQ  318 (343)
Q Consensus       269 ~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~------dg~i~iwd~~~~~~~~~~~  318 (343)
                           ..  +...++.++|+|||++|++++.      |+.++||+. .|+.+....
T Consensus       140 -----~~--~~~~~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~-~G~~l~~~~  187 (194)
T PF08662_consen  140 -----TF--EHSDATDVEWSPDGRYLATATTSPRLRVDNGFKIWSF-QGRLLYKKP  187 (194)
T ss_pred             -----cc--ccCcEEEEEEcCCCCEEEEEEeccceeccccEEEEEe-cCeEeEecc
Confidence                 22  2234789999999999998864      788999998 577666543

>KOG1334|consensus

Probab=99.73  E-value=1.6e-16  Score=126.24  Aligned_cols=281  Identities=15%  Similarity=0.196  Sum_probs=198.3

Q ss_pred             eEEEecCCCCeEEEEecCCceEEEEEe-cCCCCcceEEEEeCC--ceEEEEEcCCCeEEEEeCCCcccc---eecccCCc
Q psy10867          6 EVAFSYDGSGAISVWEPKGGTLLMSYK-GASVLSPHSMCLLGN--DYVLGVEKGKPMIQAWPVNSQEKA---QLRLICPG   79 (343)
Q Consensus         6 ~~~~s~~~dg~i~iwd~~~~~~~~~~~-~~~~~~v~~~~~~~~--~~~~~~~~~~~~i~iw~~~~~~~~---~~~~~~~~   79 (343)
                      .++.|++.|..|.+||+.+++....+. +|.. .|....|-|.  .+-+++++.||.+++=.+......   ..+..|.+
T Consensus       155 d~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~-NvfQaKFiP~s~d~ti~~~s~dgqvr~s~i~~t~~~e~t~rl~~h~g  233 (559)
T KOG1334|consen  155 DVLASGSDDLQVVVWDWVSGSPKLSFESGHCN-NVFQAKFIPFSGDRTIVTSSRDGQVRVSEILETGYVENTKRLAPHEG  233 (559)
T ss_pred             ceeeccCccceEEeehhhccCccccccccccc-chhhhhccCCCCCcCceeccccCceeeeeeccccceecceecccccC
Confidence            456778889999999999988877765 5666 7777778774  355666666699998765443322   44558999


Q ss_pred             ceEEEEECCCCC--EEEEecCCeEEEEEccCCceEEEe---cccCC---CeEEEEEec-CCCEEEEecCCCeEEEeecCc
Q psy10867         80 RISSMQASPDAA--YIAVSIETKLHMWQISSGRLLATA---SSHYQ---PITIVKWSA-DSNFIVTGGEDGTICVWQLSR  150 (343)
Q Consensus        80 ~v~~~~~s~~~~--~l~~~~d~~i~v~~~~~~~~~~~~---~~~~~---~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~  150 (343)
                      +|..++.-|+..  ++.++.|+.+.-+|++.+.....+   ..+..   ....++..| +..++++++.|..+++||.+.
T Consensus       234 ~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~~~~~~~v~L~~Ia~~P~nt~~faVgG~dqf~RvYD~R~  313 (559)
T KOG1334|consen  234 PVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFVCREADEKERVGLYTIAVDPRNTNEFAVGGSDQFARVYDQRR  313 (559)
T ss_pred             ccceeeecCCCCCcccccccccceeeeeeccCCccceeeeeccCCccceeeeeEecCCCCccccccCChhhhhhhhcccc
Confidence            999999999763  555689999999999887554332   22333   467888888 445899999999999999886


Q ss_pred             cceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCc------------
Q psy10867        151 LICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGE------------  218 (343)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~------------  218 (343)
                      ......          ..+.....+..........|++++|+.++  .-++++..|-.|+++.-..+.            
T Consensus       314 ~~~e~~----------n~~~~~f~p~hl~~d~~v~ITgl~Ysh~~--sElLaSYnDe~IYLF~~~~~~G~~p~~~s~~~~  381 (559)
T KOG1334|consen  314 IDKEEN----------NGVLDKFCPHHLVEDDPVNITGLVYSHDG--SELLASYNDEDIYLFNKSMGDGSEPDPSSPREQ  381 (559)
T ss_pred             hhhccc----------cchhhhcCCccccccCcccceeEEecCCc--cceeeeecccceEEeccccccCCCCCCCcchhh
Confidence            432210          00001111222223445679999999877  567777788889998533211            


Q ss_pred             eEEE-ee-c--CCcEEEEEE-cCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCE
Q psy10867        219 DLLS-LI-L--DTRLTCVAF-DGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGIT  293 (343)
Q Consensus       219 ~~~~-~~-~--~~~i~~~~~-~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~  293 (343)
                      .+.. ++ |  ...|..+-| -|...++++|+.-|.|.||+-.+.+.           +..+.+...-|+||.=+|--..
T Consensus       382 ~~k~vYKGHrN~~TVKgVNFfGPrsEyVvSGSDCGhIFiW~K~t~ei-----------i~~MegDr~VVNCLEpHP~~Pv  450 (559)
T KOG1334|consen  382 YVKRVYKGHRNSRTVKGVNFFGPRSEYVVSGSDCGHIFIWDKKTGEI-----------IRFMEGDRHVVNCLEPHPHLPV  450 (559)
T ss_pred             ccchhhcccccccccceeeeccCccceEEecCccceEEEEecchhHH-----------HHHhhcccceEeccCCCCCCch
Confidence            1111 22 2  234666665 57889999999999999999887554           4445666668999999999899


Q ss_pred             EEEEeCCCcEEEEeccc
Q psy10867        294 LLSSSADETLKIWHTIS  310 (343)
Q Consensus       294 l~s~~~dg~i~iwd~~~  310 (343)
                      ||+++-|..|+||-..+
T Consensus       451 LAsSGid~DVKIWTP~~  467 (559)
T KOG1334|consen  451 LASSGIDHDVKIWTPLT  467 (559)
T ss_pred             hhccCCccceeeecCCc
Confidence            99999999999998643

>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain

Probab=99.73  E-value=2.4e-13  Score=108.91  Aligned_cols=266  Identities=13%  Similarity=0.111  Sum_probs=167.6

Q ss_pred             CeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEE-c---------CCCeEEEEeCCCcccceecccCC------
Q psy10867         15 GAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVE-K---------GKPMIQAWPVNSQEKAQLRLICP------   78 (343)
Q Consensus        15 g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~---------~~~~i~iw~~~~~~~~~~~~~~~------   78 (343)
                      +.|.+.|..+++.+.++.....  .+.+ ++||++.+..+ .         ++..|.+||..+.+.+..+....      
T Consensus        27 ~~v~ViD~~~~~v~g~i~~G~~--P~~~-~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~~~~  103 (352)
T TIGR02658        27 TQVYTIDGEAGRVLGMTDGGFL--PNPV-VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPRFLV  103 (352)
T ss_pred             ceEEEEECCCCEEEEEEEccCC--Ccee-ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCchhhc
Confidence            8999999999999999987663  3445 99998555443 4         46899999999998885554222      


Q ss_pred             -cceEEEEECCCCCEEEEe--c-CCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCcccee
Q psy10867         79 -GRISSMQASPDAAYIAVS--I-ETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICK  154 (343)
Q Consensus        79 -~~v~~~~~s~~~~~l~~~--~-d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~  154 (343)
                       ..-..++++|||++|...  . ++.|.+.|+.+++.+..+.-.. ...-...+++.. + .-+.||......+......
T Consensus       104 ~~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~~kvv~ei~vp~-~~~vy~t~e~~~-~-~~~~Dg~~~~v~~d~~g~~  180 (352)
T TIGR02658       104 GTYPWMTSLTPDNKTLLFYQFSPSPAVGVVDLEGKAFVRMMDVPD-CYHIFPTANDTF-F-MHCRDGSLAKVGYGTKGNP  180 (352)
T ss_pred             cCccceEEECCCCCEEEEecCCCCCEEEEEECCCCcEEEEEeCCC-CcEEEEecCCcc-E-EEeecCceEEEEecCCCce
Confidence             223478999999988863  2 7899999999999988776422 122222222222 2 1223444433333221111


Q ss_pred             eeeecCCCCCCCCccccccceeeeecccccceE-EEEeec-CCCceEEEEeeCCCeEEEEecCCCc-----eEEEee---
Q psy10867        155 QTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVT-HVTLSK-LGAKSRVASVSHDRTCKIFDLCTGE-----DLLSLI---  224 (343)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~-~~~~~~l~~~~~d~~i~~wd~~~~~-----~~~~~~---  224 (343)
                      ...                 ....+.....++. .-.+.+ ++  .++....+ |+|.+.|+...+     ....+.   
T Consensus       181 ~~~-----------------~~~vf~~~~~~v~~rP~~~~~dg--~~~~vs~e-G~V~~id~~~~~~~~~~~~~~~~~~~  240 (352)
T TIGR02658       181 KIK-----------------PTEVFHPEDEYLINHPAYSNKSG--RLVWPTYT-GKIFQIDLSSGDAKFLPAIEAFTEAE  240 (352)
T ss_pred             EEe-----------------eeeeecCCccccccCCceEcCCC--cEEEEecC-CeEEEEecCCCcceecceeeeccccc
Confidence            100                 1111111000000 004455 55  55555555 999999964432     222221   


Q ss_pred             -----cCCcEEEEEEcCCCCEEEEEc----------CCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEcc
Q psy10867        225 -----LDTRLTCVAFDGTEDNIYMGT----------SEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSI  289 (343)
Q Consensus       225 -----~~~~i~~~~~~~~~~~l~~~~----------~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~  289 (343)
                           .+..+.-++++|+++.+++..          ..+.|.++|..+.+....+           . -...+..++++|
T Consensus       241 ~~~~wrP~g~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t~kvi~~i-----------~-vG~~~~~iavS~  308 (352)
T TIGR02658       241 KADGWRPGGWQQVAYHRARDRIYLLADQRAKWTHKTASRFLFVVDAKTGKRLRKI-----------E-LGHEIDSINVSQ  308 (352)
T ss_pred             cccccCCCcceeEEEcCCCCEEEEEecCCccccccCCCCEEEEEECCCCeEEEEE-----------e-CCCceeeEEECC
Confidence                 123345599999999999843          2257999998876654332           2 235788999999


Q ss_pred             CCC-EEEEEe-CCCcEEEEecccceeeeecc
Q psy10867        290 TGI-TLLSSS-ADETLKIWHTISRQCLRTIQ  318 (343)
Q Consensus       290 ~~~-~l~s~~-~dg~i~iwd~~~~~~~~~~~  318 (343)
                      |++ +|++.. .++.|.+.|..+++.+.++.
T Consensus       309 Dgkp~lyvtn~~s~~VsViD~~t~k~i~~i~  339 (352)
T TIGR02658       309 DAKPLLYALSTGDKTLYIFDAETGKELSSVN  339 (352)
T ss_pred             CCCeEEEEeCCCCCcEEEEECcCCeEEeeec
Confidence            999 777665 67889999999999999985

This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.

>KOG3881|consensus

Probab=99.72  E-value=1.1e-15  Score=118.25  Aligned_cols=211  Identities=17%  Similarity=0.199  Sum_probs=163.9

Q ss_pred             ccceEEEecCCCCeEEEEecCCc----eEEEEEecCCCCcceEEEEeCCc-eEEEEEcCC--CeEEEEeCCCcccceecc
Q psy10867          3 LLNEVAFSYDGSGAISVWEPKGG----TLLMSYKGASVLSPHSMCLLGND-YVLGVEKGK--PMIQAWPVNSQEKAQLRL   75 (343)
Q Consensus         3 ~v~~~~~s~~~dg~i~iwd~~~~----~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~~--~~i~iw~~~~~~~~~~~~   75 (343)
                      ..++-++++.++|.+.+|..+.+    ..+..+..+.  .+..+.-+|.. .++++|+..  ..+.|||++..+.+..-.
T Consensus       113 ~~dg~Litc~~sG~l~~~~~k~~d~hss~l~~la~g~--g~~~~r~~~~~p~Iva~GGke~~n~lkiwdle~~~qiw~aK  190 (412)
T KOG3881|consen  113 LADGTLITCVSSGNLQVRHDKSGDLHSSKLIKLATGP--GLYDVRQTDTDPYIVATGGKENINELKIWDLEQSKQIWSAK  190 (412)
T ss_pred             hcCCEEEEEecCCcEEEEeccCCccccccceeeecCC--ceeeeccCCCCCceEecCchhcccceeeeecccceeeeecc
Confidence            34566788888999999998743    2344455554  56667666654 666667776  689999999875442211


Q ss_pred             c---------CCcceEEEEECCC--CCEEEE-ecCCeEEEEEccCC-ceEEEecccCCCeEEEEEecCCCEEEEecCCCe
Q psy10867         76 I---------CPGRISSMQASPD--AAYIAV-SIETKLHMWQISSG-RLLATASSHYQPITIVKWSADSNFIVTGGEDGT  142 (343)
Q Consensus        76 ~---------~~~~v~~~~~s~~--~~~l~~-~~d~~i~v~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~  142 (343)
                      .         -+-.++++.|.+.  ...+|+ ..-+.+++||.+.+ +++..+.-...+++++...|.++++++|..-|.
T Consensus       191 NvpnD~L~LrVPvW~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qRRPV~~fd~~E~~is~~~l~p~gn~Iy~gn~~g~  270 (412)
T KOG3881|consen  191 NVPNDRLGLRVPVWITDIRFLEGSPNYKFATITRYHQVRLYDTRHQRRPVAQFDFLENPISSTGLTPSGNFIYTGNTKGQ  270 (412)
T ss_pred             CCCCccccceeeeeeccceecCCCCCceEEEEecceeEEEecCcccCcceeEeccccCcceeeeecCCCcEEEEecccch
Confidence            1         1223678889876  566665 67899999999876 567777777889999999999999999999999


Q ss_pred             EEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEE
Q psy10867        143 ICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLS  222 (343)
Q Consensus       143 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~  222 (343)
                      +..||++.+..                     ....+.+-.+.|+++..+|..  .++++++-|+.+||+|+++.+.+..
T Consensus       271 l~~FD~r~~kl---------------------~g~~~kg~tGsirsih~hp~~--~~las~GLDRyvRIhD~ktrkll~k  327 (412)
T KOG3881|consen  271 LAKFDLRGGKL---------------------LGCGLKGITGSIRSIHCHPTH--PVLASCGLDRYVRIHDIKTRKLLHK  327 (412)
T ss_pred             hheecccCcee---------------------eccccCCccCCcceEEEcCCC--ceEEeeccceeEEEeecccchhhhh
Confidence            99999999754                     333467788999999999998  7999999999999999999888777


Q ss_pred             eecCCcEEEEEEcCCC
Q psy10867        223 LILDTRLTCVAFDGTE  238 (343)
Q Consensus       223 ~~~~~~i~~~~~~~~~  238 (343)
                      ....+.++++.+.++-
T Consensus       328 vYvKs~lt~il~~~~~  343 (412)
T KOG3881|consen  328 VYVKSRLTFILLRDDV  343 (412)
T ss_pred             hhhhccccEEEecCCc
Confidence            7777888888886643

>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins

Probab=99.72  E-value=2.1e-15  Score=112.36  Aligned_cols=148  Identities=12%  Similarity=0.221  Sum_probs=108.6

Q ss_pred             EEEEECCCCCEEEE-ec----------CCeEEEEEccC-CceEEEecc-cCCCeEEEEEecCCCEEEE--ecCCCeEEEe
Q psy10867         82 SSMQASPDAAYIAV-SI----------ETKLHMWQISS-GRLLATASS-HYQPITIVKWSADSNFIVT--GGEDGTICVW  146 (343)
Q Consensus        82 ~~~~~s~~~~~l~~-~~----------d~~i~v~~~~~-~~~~~~~~~-~~~~v~~~~~~~~~~~l~s--~~~dg~i~iw  146 (343)
                      ..+.|+|+|.+|+. ..          -+...+|.++. +.....+.- ..++|.+++|+|+++.|++  |..++.|.+|
T Consensus         9 ~~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~~~~i~l~~~~~I~~~~WsP~g~~favi~g~~~~~v~ly   88 (194)
T PF08662_consen    9 AKLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNIPVESIELKKEGPIHDVAWSPNGNEFAVIYGSMPAKVTLY   88 (194)
T ss_pred             EEEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCCccceeeccCCCceEEEEECcCCCEEEEEEccCCcccEEE
Confidence            46789999988885 21          12355555532 233444432 3457999999999998755  4467799999


Q ss_pred             ecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeC---CCeEEEEecCCCceEEEe
Q psy10867        147 QLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSH---DRTCKIFDLCTGEDLLSL  223 (343)
Q Consensus       147 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~---d~~i~~wd~~~~~~~~~~  223 (343)
                      |++..                       .+..+  +...++.+.|+|+|  +++++++.   .|.|.+||.++.+.+...
T Consensus        89 d~~~~-----------------------~i~~~--~~~~~n~i~wsP~G--~~l~~~g~~n~~G~l~~wd~~~~~~i~~~  141 (194)
T PF08662_consen   89 DVKGK-----------------------KIFSF--GTQPRNTISWSPDG--RFLVLAGFGNLNGDLEFWDVRKKKKISTF  141 (194)
T ss_pred             cCccc-----------------------EeEee--cCCCceEEEECCCC--CEEEEEEccCCCcEEEEEECCCCEEeecc
Confidence            99732                       33333  34677899999999  78888764   467999999988888777


Q ss_pred             ecCCcEEEEEEcCCCCEEEEEcC------CCcEEEEEeec
Q psy10867        224 ILDTRLTCVAFDGTEDNIYMGTS------EGVIKSFCLRQ  257 (343)
Q Consensus       224 ~~~~~i~~~~~~~~~~~l~~~~~------d~~i~i~d~~~  257 (343)
                      .+.. ++.++|+|+|++++++..      |+.++||+...
T Consensus       142 ~~~~-~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~~G  180 (194)
T PF08662_consen  142 EHSD-ATDVEWSPDGRYLATATTSPRLRVDNGFKIWSFQG  180 (194)
T ss_pred             ccCc-EEEEEEcCCCCEEEEEEeccceeccccEEEEEecC
Confidence            6654 789999999999999864      77889999864

>KOG1409|consensus

Probab=99.72  E-value=4.6e-15  Score=113.06  Aligned_cols=282  Identities=15%  Similarity=0.157  Sum_probs=195.7

Q ss_pred             cceEEEecCCCCeEEEEe-cCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCC----CcccceecccCC
Q psy10867          4 LNEVAFSYDGSGAISVWE-PKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVN----SQEKAQLRLICP   78 (343)
Q Consensus         4 v~~~~~s~~~dg~i~iwd-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~----~~~~~~~~~~~~   78 (343)
                      +..-+|+.+.|.+++||- .+.++.-..+......+++++.+.++.+.|.+|-+.|++.-+.+.    .....+....|.
T Consensus        35 ~e~gv~~~s~drtvrv~lkrds~q~wpsI~~~mP~~~~~~~y~~e~~~L~vg~~ngtvtefs~sedfnkm~~~r~~~~h~  114 (404)
T KOG1409|consen   35 KEEGVISVSEDRTVRVWLKRDSGQYWPSIYHYMPSPCSAMEYVSESRRLYVGQDNGTVTEFALSEDFNKMTFLKDYLAHQ  114 (404)
T ss_pred             CCCCeEEccccceeeeEEeccccccCchhhhhCCCCceEeeeeccceEEEEEEecceEEEEEhhhhhhhcchhhhhhhhh
Confidence            444578888899999995 445665555444332388999999999999999998999888653    334446666899


Q ss_pred             cceEEEEECCCCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeee
Q psy10867         79 GRISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTV  157 (343)
Q Consensus        79 ~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~  157 (343)
                      .++..+.|+....++++ +.|..+.--..+.+..+..+.- ....+++.+.-.  +...|...|.|..-.+....+    
T Consensus       115 ~~v~~~if~~~~e~V~s~~~dk~~~~hc~e~~~~lg~Y~~-~~~~t~~~~d~~--~~fvGd~~gqvt~lr~~~~~~----  187 (404)
T KOG1409|consen  115 ARVSAIVFSLTHEWVLSTGKDKQFAWHCTESGNRLGGYNF-ETPASALQFDAL--YAFVGDHSGQITMLKLEQNGC----  187 (404)
T ss_pred             cceeeEEecCCceeEEEeccccceEEEeeccCCcccceEe-eccCCCCceeeE--EEEecccccceEEEEEeecCC----
Confidence            99999999988777776 6676665545555544332211 111122222111  555666667766655543221    


Q ss_pred             ecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCce--EEEeecCCcEEEEEEc
Q psy10867        158 AFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGED--LLSLILDTRLTCVAFD  235 (343)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~--~~~~~~~~~i~~~~~~  235 (343)
                                      .++..+.+|...+.+++|.|..  .+++++..|..+.+||+.-.+-  .....|...+..+...
T Consensus       188 ----------------~~i~~~~~h~~~~~~l~Wd~~~--~~LfSg~~d~~vi~wdigg~~g~~~el~gh~~kV~~l~~~  249 (404)
T KOG1409|consen  188 ----------------QLITTFNGHTGEVTCLKWDPGQ--RLLFSGASDHSVIMWDIGGRKGTAYELQGHNDKVQALSYA  249 (404)
T ss_pred             ----------------ceEEEEcCcccceEEEEEcCCC--cEEEeccccCceEEEeccCCcceeeeeccchhhhhhhhhh
Confidence                            2677888999999999999988  8999999999999999865443  3333477889999888


Q ss_pred             CCCCEEEEEcCCCcEEEEEeecccccccccc-------------------------------------------------
Q psy10867        236 GTEDNIYMGTSEGVIKSFCLRQVPRTRDHHI-------------------------------------------------  266 (343)
Q Consensus       236 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-------------------------------------------------  266 (343)
                      +.-+.+++++.||.|.+|+++.......-..                                                 
T Consensus       250 ~~t~~l~S~~edg~i~~w~mn~~r~etpewl~s~~cQ~c~qpffwn~~~m~~~k~~glr~h~crkcg~avc~~c~s~~~~  329 (404)
T KOG1409|consen  250 QHTRQLISCGEDGGIVVWNMNVKRVETPEWLDSDSCQKCNQPFFWNFRQMWDRKQLGLRQHHCRKCGKAVCGKCSSNRSS  329 (404)
T ss_pred             hhheeeeeccCCCeEEEEeccceeecCccccccchhhhhCchHHHHHHHHHhhhhhhhhhhhhhhhhhhcCcccccCccc
Confidence            8889999999999999999876432211000                                                 


Q ss_pred             ----------------------cCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEeccc
Q psy10867        267 ----------------------QDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTIS  310 (343)
Q Consensus       267 ----------------------~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~  310 (343)
                                            ....++..+..-...|+.+.+..+-.+|++++.|..|+|||+++
T Consensus       330 ~p~mg~e~~vR~~~~c~~~i~~~~~t~LA~phei~tgItamhlqetlglLvTsG~~Rvi~iwd~~~  395 (404)
T KOG1409|consen  330 YPTMGFEFSVRVCDSCYPTIKDEERTPLAIPHEIKTGITAMHLQETLGLLVTSGTDRVIKIWDVRS  395 (404)
T ss_pred             cccccceeEEEEecccchhhhcCCCCccccccccccceeEEEhhhhccceeecCCceEEEEEechh
Confidence                                  01111222222234588888888888999999999999999864

>PRK04792 tolB translocation protein TolB; Provisional

Probab=99.71  E-value=1.6e-14  Score=122.43  Aligned_cols=232  Identities=15%  Similarity=0.091  Sum_probs=145.4

Q ss_pred             eEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-ec-C--CeEEEEEccCCceEEEecccCCCeEEEEEecCCCEE
Q psy10867         59 MIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SI-E--TKLHMWQISSGRLLATASSHYQPITIVKWSADSNFI  134 (343)
Q Consensus        59 ~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~-d--~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  134 (343)
                      .+.++|...... +.+......+....|+|||+.|+. +. +  ..|++||+.+++... +....+......|+|||+.|
T Consensus       199 ~l~i~d~dG~~~-~~l~~~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~-lt~~~g~~~~~~wSPDG~~L  276 (448)
T PRK04792        199 QLMIADYDGYNE-QMLLRSPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVREK-VTSFPGINGAPRFSPDGKKL  276 (448)
T ss_pred             EEEEEeCCCCCc-eEeecCCCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeEE-ecCCCCCcCCeeECCCCCEE
Confidence            566778765543 334456778899999999998885 32 2  369999998886533 22223334578999999977


Q ss_pred             EE-ecCCCe--EEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEee-CCC--e
Q psy10867        135 VT-GGEDGT--ICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVS-HDR--T  208 (343)
Q Consensus       135 ~s-~~~dg~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~-~d~--~  208 (343)
                      +. .+.+|.  |.++|+.++.                       ...+..+.......+|+|++  +.++..+ .++  .
T Consensus       277 a~~~~~~g~~~Iy~~dl~tg~-----------------------~~~lt~~~~~~~~p~wSpDG--~~I~f~s~~~g~~~  331 (448)
T PRK04792        277 ALVLSKDGQPEIYVVDIATKA-----------------------LTRITRHRAIDTEPSWHPDG--KSLIFTSERGGKPQ  331 (448)
T ss_pred             EEEEeCCCCeEEEEEECCCCC-----------------------eEECccCCCCccceEECCCC--CEEEEEECCCCCce
Confidence            65 455664  7777887653                       22233344456778999999  5555443 333  5


Q ss_pred             EEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcC-CCc--EEEEEeecccccccccccCCCCCCccccccCcEEEE
Q psy10867        209 CKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTS-EGV--IKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSL  285 (343)
Q Consensus       209 i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d~~--i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  285 (343)
                      |.++|+.+++..............+|+|+|++|+..+. ++.  |.++|+.+.....            +... ......
T Consensus       332 Iy~~dl~~g~~~~Lt~~g~~~~~~~~SpDG~~l~~~~~~~g~~~I~~~dl~~g~~~~------------lt~~-~~d~~p  398 (448)
T PRK04792        332 IYRVNLASGKVSRLTFEGEQNLGGSITPDGRSMIMVNRTNGKFNIARQDLETGAMQV------------LTST-RLDESP  398 (448)
T ss_pred             EEEEECCCCCEEEEecCCCCCcCeeECCCCCEEEEEEecCCceEEEEEECCCCCeEE------------ccCC-CCCCCc
Confidence            77778877765432222233445789999999887654 443  4455655432211            1111 111234


Q ss_pred             EEccCCCEEEEEeC-CC--cEEEEecccceeeeecc-cCCceEEEEEccC
Q psy10867        286 SCSITGITLLSSSA-DE--TLKIWHTISRQCLRTIQ-HKGPVLGAFLGLL  331 (343)
Q Consensus       286 ~~s~~~~~l~s~~~-dg--~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~  331 (343)
                      .|+|||+.|+..+. ++  .+++++. +|+....+. +.+.+...+|+|-
T Consensus       399 s~spdG~~I~~~~~~~g~~~l~~~~~-~G~~~~~l~~~~g~~~~p~Wsp~  447 (448)
T PRK04792        399 SVAPNGTMVIYSTTYQGKQVLAAVSI-DGRFKARLPAGQGEVKSPAWSPF  447 (448)
T ss_pred             eECCCCCEEEEEEecCCceEEEEEEC-CCCceEECcCCCCCcCCCccCCC
Confidence            79999998876554 33  3677776 566666666 5667788889873

>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB

Probab=99.71  E-value=5.4e-15  Score=125.61  Aligned_cols=204  Identities=13%  Similarity=-0.020  Sum_probs=137.5

Q ss_pred             eEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCC---CeEEEeecCccceeeeeecCCCCCCCCcccccccee
Q psy10867        100 KLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGED---GTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPL  176 (343)
Q Consensus       100 ~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  176 (343)
                      .|.++|..... ...+..+...+....|+||+++|+.+..+   ..|++||+.++..                       
T Consensus       171 ~l~~~d~~g~~-~~~l~~~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~-----------------------  226 (417)
T TIGR02800       171 ELQVADYDGAN-PQTITRSREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQR-----------------------  226 (417)
T ss_pred             eEEEEcCCCCC-CEEeecCCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCE-----------------------
Confidence            68888875443 44555566778899999999999887643   4799999987632                       


Q ss_pred             eeecccccceEEEEeecCCCceEEEEeeCCC--eEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcC-CC--cEE
Q psy10867        177 HVKSQHSLPVTHVTLSKLGAKSRVASVSHDR--TCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTS-EG--VIK  251 (343)
Q Consensus       177 ~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~--~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d~--~i~  251 (343)
                      ..+..+...+..++|+|+++ .++++.+.++  .|++||+.+++......+........|+|+++.|+..+. ++  .|+
T Consensus       227 ~~~~~~~~~~~~~~~spDg~-~l~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy  305 (417)
T TIGR02800       227 EKVASFPGMNGAPAFSPDGS-KLAVSLSKDGNPDIYVMDLDGKQLTRLTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIY  305 (417)
T ss_pred             EEeecCCCCccceEECCCCC-EEEEEECCCCCccEEEEECCCCCEEECCCCCCCCCCEEECCCCCEEEEEECCCCCceEE
Confidence            12223445566789999983 3444555444  588899887765443334444557789999998876544 33  566


Q ss_pred             EEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCC---cEEEEecccceeeeecccCCceEEEEE
Q psy10867        252 SFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADE---TLKIWHTISRQCLRTIQHKGPVLGAFL  328 (343)
Q Consensus       252 i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg---~i~iwd~~~~~~~~~~~~~~~v~~~~~  328 (343)
                      ++|+.....            ..+..+........|+|+|++++.++.++   .|.+||+.++... .+..........|
T Consensus       306 ~~d~~~~~~------------~~l~~~~~~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~~~~~-~l~~~~~~~~p~~  372 (417)
T TIGR02800       306 MMDADGGEV------------RRLTFRGGYNASPSWSPDGDLIAFVHREGGGFNIAVMDLDGGGER-VLTDTGLDESPSF  372 (417)
T ss_pred             EEECCCCCE------------EEeecCCCCccCeEECCCCCEEEEEEccCCceEEEEEeCCCCCeE-EccCCCCCCCceE
Confidence            777654321            12222345567789999999999888775   7899998876543 3332223456789


Q ss_pred             ccCCCeeeecccC
Q psy10867        329 GLLPPAIHDYDFT  341 (343)
Q Consensus       329 sp~~~~l~~~~~~  341 (343)
                      +||+++|+..+..
T Consensus       373 spdg~~l~~~~~~  385 (417)
T TIGR02800       373 APNGRMILYATTR  385 (417)
T ss_pred             CCCCCEEEEEEeC
Confidence            9999999876543

The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.

>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]

Probab=99.70  E-value=5.9e-14  Score=112.53  Aligned_cols=297  Identities=11%  Similarity=0.053  Sum_probs=199.9

Q ss_pred             ccceEEEecCC-------CCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCC---------------eE
Q psy10867          3 LLNEVAFSYDG-------SGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKP---------------MI   60 (343)
Q Consensus         3 ~v~~~~~s~~~-------dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~---------------~i   60 (343)
                      ++....+||-|       ...|.+|.-..+..+..+...   .|..+.|+|++++|.+-...+               .+
T Consensus        34 p~~~~~~SP~G~~l~~~~~~~V~~~~g~~~~~l~~~~~~---~V~~~~fSP~~kYL~tw~~~pi~~pe~e~sp~~~~n~~  110 (561)
T COG5354          34 PVAYVSESPLGTYLFSEHAAGVECWGGPSKAKLVRFRHP---DVKYLDFSPNEKYLVTWSREPIIEPEIEISPFTSKNNV  110 (561)
T ss_pred             chhheeecCcchheehhhccceEEccccchhheeeeecC---CceecccCcccceeeeeccCCccChhhccCCccccCce
Confidence            44556666666       246899998887766666543   679999999999998866533               48


Q ss_pred             EEEeCCCcccceecccCCcc--eE-EEEECCCCCEEEEecCCeEEEEEccCCceE-EEecc-cCCCeEEEEEecC--CCE
Q psy10867         61 QAWPVNSQEKAQLRLICPGR--IS-SMQASPDAAYIAVSIETKLHMWQISSGRLL-ATASS-HYQPITIVKWSAD--SNF  133 (343)
Q Consensus        61 ~iw~~~~~~~~~~~~~~~~~--v~-~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~-~~~~~-~~~~v~~~~~~~~--~~~  133 (343)
                      .+||..++..+..+.....+  .. -+.|+-+.+++|--....++|+++ ++... .-+.. ....+....|+|.  +..
T Consensus       111 ~vwd~~sg~iv~sf~~~~q~~~~Wp~~k~s~~D~y~ARvv~~sl~i~e~-t~n~~~~p~~~lr~~gi~dFsisP~~n~~~  189 (561)
T COG5354         111 FVWDIASGMIVFSFNGISQPYLGWPVLKFSIDDKYVARVVGSSLYIHEI-TDNIEEHPFKNLRPVGILDFSISPEGNHDE  189 (561)
T ss_pred             eEEeccCceeEeeccccCCcccccceeeeeecchhhhhhccCeEEEEec-CCccccCchhhccccceeeEEecCCCCCce
Confidence            99999999988766655544  44 678998888888545678999997 44321 11111 1256888889985  334


Q ss_pred             EEE-----ecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEe-----
Q psy10867        134 IVT-----GGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASV-----  203 (343)
Q Consensus       134 l~s-----~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~-----  203 (343)
                      |+.     .+.++.+++|.+.....+.+..                      --...=..+.|.+.|  .+++.-     
T Consensus       190 la~~tPEk~~kpa~~~i~sIp~~s~l~tk~----------------------lfk~~~~qLkW~~~g--~~ll~l~~t~~  245 (561)
T COG5354         190 LAYWTPEKLNKPAMVRILSIPKNSVLVTKN----------------------LFKVSGVQLKWQVLG--KYLLVLVMTHT  245 (561)
T ss_pred             EEEEccccCCCCcEEEEEEccCCCeeeeee----------------------eEeecccEEEEecCC--ceEEEEEEEee
Confidence            443     4567889999988654443221                      111122346677776  343321     


Q ss_pred             ------eCCCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEE--EcCCCcEEEEEeecccccccccccCCCCCCcc
Q psy10867        204 ------SHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYM--GTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDF  275 (343)
Q Consensus       204 ------~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~--~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~  275 (343)
                            -....+++++++.....-.....++|...+|.|.++.+++  |..+..+.++|++..-              .+
T Consensus       246 ksnKsyfgesnLyl~~~~e~~i~V~~~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~Nl--------------~~  311 (561)
T COG5354         246 KSNKSYFGESNLYLLRITERSIPVEKDLKDPVHDFTWEPLSSRFAVISGYMPASVSVFDLRGNL--------------RF  311 (561)
T ss_pred             ecccceeccceEEEEeecccccceeccccccceeeeecccCCceeEEecccccceeecccccce--------------EE
Confidence                  1135688888874444433356889999999999887665  4578899999988641              22


Q ss_pred             ccccCcEEEEEEccCCCEEEEEeCC---CcEEEEecccceeee-ecccCCceEEEEEccCCCeeeecccCC
Q psy10867        276 IGHEKQVTSLSCSITGITLLSSSAD---ETLKIWHTISRQCLR-TIQHKGPVLGAFLGLLPPAIHDYDFTP  342 (343)
Q Consensus       276 ~~~~~~v~~~~~s~~~~~l~s~~~d---g~i~iwd~~~~~~~~-~~~~~~~v~~~~~sp~~~~l~~~~~~~  342 (343)
                      ....+.=+.+.|+|.+++++.++.|   |.+-+||........ .+. ....+-+.|+||++++.+..-.|
T Consensus       312 ~~Pe~~rNT~~fsp~~r~il~agF~nl~gni~i~~~~~rf~~~~~~~-~~n~s~~~wspd~qF~~~~~ts~  381 (561)
T COG5354         312 YFPEQKRNTIFFSPHERYILFAGFDNLQGNIEIFDPAGRFKVAGAFN-GLNTSYCDWSPDGQFYDTDTTSE  381 (561)
T ss_pred             ecCCcccccccccCcccEEEEecCCccccceEEeccCCceEEEEEee-cCCceEeeccCCceEEEecCCCc
Confidence            3344555668899999999988766   689999987654444 443 23345678999999988765444

>PRK00178 tolB translocation protein TolB; Provisional

Probab=99.69  E-value=3.3e-14  Score=120.90  Aligned_cols=211  Identities=15%  Similarity=0.111  Sum_probs=136.9

Q ss_pred             eEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEc-CC--CeEEEEeCCCcccceecccCCcceEEEEECCCCCE
Q psy10867         16 AISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEK-GK--PMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAY   92 (343)
Q Consensus        16 ~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~--~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~   92 (343)
                      .|.++|...+. .+.+..+.. .+....|+|||+.++..+ .+  ..|.+|++.+++..... ...+.+...+|+|||+.
T Consensus       180 ~l~~~d~~g~~-~~~l~~~~~-~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~l~-~~~g~~~~~~~SpDG~~  256 (430)
T PRK00178        180 TLQRSDYDGAR-AVTLLQSRE-PILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQIT-NFEGLNGAPAWSPDGSK  256 (430)
T ss_pred             EEEEECCCCCC-ceEEecCCC-ceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEEcc-CCCCCcCCeEECCCCCE
Confidence            57888876444 455555666 789999999997665543 22  36889999887654332 33445567899999998


Q ss_pred             EEE--ecCC--eEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecC-CC--eEEEeecCccceeeeeecCCCCCC
Q psy10867         93 IAV--SIET--KLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGE-DG--TICVWQLSRLICKQTVAFGIPGSS  165 (343)
Q Consensus        93 l~~--~~d~--~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-dg--~i~iwd~~~~~~~~~~~~~~~~~~  165 (343)
                      |+.  ..++  .|++||+.+++.. .+..+........|+||++.|+..+. +|  .|.++++.+++...          
T Consensus       257 la~~~~~~g~~~Iy~~d~~~~~~~-~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~~~----------  325 (430)
T PRK00178        257 LAFVLSKDGNPEIYVMDLASRQLS-RVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRAER----------  325 (430)
T ss_pred             EEEEEccCCCceEEEEECCCCCeE-EcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCCEEE----------
Confidence            874  3333  7899999887654 45555556677899999998776553 33  57777776653211          


Q ss_pred             CCccccccceeeeecccccceEEEEeecCCCceEEEEeeC-CC--eEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEE
Q psy10867        166 GKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSH-DR--TCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIY  242 (343)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~-d~--~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~  242 (343)
                                   +...........|+|++  +.++..+. ++  .|.++|+.+++... +..........|+|+|+.++
T Consensus       326 -------------lt~~~~~~~~~~~Spdg--~~i~~~~~~~~~~~l~~~dl~tg~~~~-lt~~~~~~~p~~spdg~~i~  389 (430)
T PRK00178        326 -------------VTFVGNYNARPRLSADG--KTLVMVHRQDGNFHVAAQDLQRGSVRI-LTDTSLDESPSVAPNGTMLI  389 (430)
T ss_pred             -------------eecCCCCccceEECCCC--CEEEEEEccCCceEEEEEECCCCCEEE-ccCCCCCCCceECCCCCEEE
Confidence                         11111223456899999  56665543 33  58889998876533 33222333568999999988


Q ss_pred             EEcCC-C--cEEEEEee
Q psy10867        243 MGTSE-G--VIKSFCLR  256 (343)
Q Consensus       243 ~~~~d-~--~i~i~d~~  256 (343)
                      ..+.+ +  .+.++++.
T Consensus       390 ~~~~~~g~~~l~~~~~~  406 (430)
T PRK00178        390 YATRQQGRGVLMLVSIN  406 (430)
T ss_pred             EEEecCCceEEEEEECC
Confidence            76543 3  45566654

>KOG2321|consensus

Probab=99.69  E-value=2.1e-14  Score=116.65  Aligned_cols=270  Identities=14%  Similarity=0.170  Sum_probs=186.2

Q ss_pred             ceEEEecCC---------CCeEEEEecCCceEEEEEecCCCCcceE-EEEeCCceEEEEEcCCCeEEEEeCCCcccceec
Q psy10867          5 NEVAFSYDG---------SGAISVWEPKGGTLLMSYKGASVLSPHS-MCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLR   74 (343)
Q Consensus         5 ~~~~~s~~~---------dg~i~iwd~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~   74 (343)
                      +.+-+|+||         .-.|++||+....+  .|.-|.+..+.. .-++.|-.-++.-..|.+|.+-. ..|....+.
T Consensus        55 t~ik~s~DGqY~lAtG~YKP~ikvydlanLSL--KFERhlDae~V~feiLsDD~SK~v~L~~DR~IefHa-k~G~hy~~R  131 (703)
T KOG2321|consen   55 TRIKVSPDGQYLLATGTYKPQIKVYDLANLSL--KFERHLDAEVVDFEILSDDYSKSVFLQNDRTIEFHA-KYGRHYRTR  131 (703)
T ss_pred             ceeEecCCCcEEEEecccCCceEEEEccccee--eeeecccccceeEEEeccchhhheEeecCceeeehh-hcCeeeeee
Confidence            455666666         46889999865433  333343213333 33333332233333335665543 222222222


Q ss_pred             ccCCcceEEEEEC-CCCCEEEEecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccce
Q psy10867         75 LICPGRISSMQAS-PDAAYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLIC  153 (343)
Q Consensus        75 ~~~~~~v~~~~~s-~~~~~l~~~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~  153 (343)
                      .  +..-..++++ |...+++++....|+-++++.|+.+..+....+.++++..++...+|++|+.+|.|..||.+....
T Consensus       132 I--P~~GRDm~y~~~scDly~~gsg~evYRlNLEqGrfL~P~~~~~~~lN~v~in~~hgLla~Gt~~g~VEfwDpR~ksr  209 (703)
T KOG2321|consen  132 I--PKFGRDMKYHKPSCDLYLVGSGSEVYRLNLEQGRFLNPFETDSGELNVVSINEEHGLLACGTEDGVVEFWDPRDKSR  209 (703)
T ss_pred             c--CcCCccccccCCCccEEEeecCcceEEEEccccccccccccccccceeeeecCccceEEecccCceEEEecchhhhh
Confidence            1  2223455554 355677777788899999999999999988889999999999999999999999999999999877


Q ss_pred             eeeeecCCCCCCCCccccccceeeeecccc-----cceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeec--C
Q psy10867        154 KQTVAFGIPGSSGKGVTGLTEPLHVKSQHS-----LPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLIL--D  226 (343)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~--~  226 (343)
                      ...+...                .....|.     ..|+++.|+.+|  -.+++|+.+|.+.+||+++.+++..-.|  .
T Consensus       210 v~~l~~~----------------~~v~s~pg~~~~~svTal~F~d~g--L~~aVGts~G~v~iyDLRa~~pl~~kdh~~e  271 (703)
T KOG2321|consen  210 VGTLDAA----------------SSVNSHPGGDAAPSVTALKFRDDG--LHVAVGTSTGSVLIYDLRASKPLLVKDHGYE  271 (703)
T ss_pred             heeeecc----------------cccCCCccccccCcceEEEecCCc--eeEEeeccCCcEEEEEcccCCceeecccCCc
Confidence            6665422                1222233     349999999998  8999999999999999999998877765  5


Q ss_pred             CcEEEEEEcCCC--CEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEE
Q psy10867        227 TRLTCVAFDGTE--DNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLK  304 (343)
Q Consensus       227 ~~i~~~~~~~~~--~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~  304 (343)
                      -+|..+.|.+.+  +.+++ .....++|||-..+....           .+ .....++.+++-|++.+++++-.+..+.
T Consensus       272 ~pi~~l~~~~~~~q~~v~S-~Dk~~~kiWd~~~Gk~~a-----------si-Ept~~lND~C~~p~sGm~f~Ane~~~m~  338 (703)
T KOG2321|consen  272 LPIKKLDWQDTDQQNKVVS-MDKRILKIWDECTGKPMA-----------SI-EPTSDLNDFCFVPGSGMFFTANESSKMH  338 (703)
T ss_pred             cceeeecccccCCCceEEe-cchHHhhhcccccCCcee-----------ec-cccCCcCceeeecCCceEEEecCCCcce
Confidence            579999998763  33443 446678999987755432           12 2345588999999999999999888777


Q ss_pred             EEeccc
Q psy10867        305 IWHTIS  310 (343)
Q Consensus       305 iwd~~~  310 (343)
                      .|=+..
T Consensus       339 ~yyiP~  344 (703)
T KOG2321|consen  339 TYYIPS  344 (703)
T ss_pred             eEEccc
Confidence            665543

>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3

Probab=99.69  E-value=1.9e-12  Score=106.42  Aligned_cols=262  Identities=13%  Similarity=0.080  Sum_probs=163.6

Q ss_pred             CeEEEEeC--CCcccceec-ccCCcceEEEEECCCCCEEEEe-----cCCeEEEEEccCC--ce--EEEecccCCCeEEE
Q psy10867         58 PMIQAWPV--NSQEKAQLR-LICPGRISSMQASPDAAYIAVS-----IETKLHMWQISSG--RL--LATASSHYQPITIV  125 (343)
Q Consensus        58 ~~i~iw~~--~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~-----~d~~i~v~~~~~~--~~--~~~~~~~~~~v~~~  125 (343)
                      +.|.+|++  ++++..... .........++++|++++|.+.     .++.|..|++...  ++  +............+
T Consensus        13 ~gI~~~~~d~~~g~l~~~~~~~~~~~Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~~~~~g~~p~~i   92 (345)
T PF10282_consen   13 GGIYVFRFDEETGTLTLVQTVAEGENPSWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNSVPSGGSSPCHI   92 (345)
T ss_dssp             TEEEEEEEETTTTEEEEEEEEEESSSECCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEEEEEESSSCEEEE
T ss_pred             CcEEEEEEcCCCCCceEeeeecCCCCCceEEEEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEeeeeccCCCCcEEE
Confidence            67888877  444433211 1234556778999999988873     3568999998764  32  33333233455689


Q ss_pred             EEecCCCEEEEec-CCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeee--------cccccceEEEEeecCCC
Q psy10867        126 KWSADSNFIVTGG-EDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVK--------SQHSLPVTHVTLSKLGA  196 (343)
Q Consensus       126 ~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~v~~~~~~~~~~  196 (343)
                      +++|++++|+++. .+|.|.++++..........                .....        ........++.++|++ 
T Consensus        93 ~~~~~g~~l~vany~~g~v~v~~l~~~g~l~~~~----------------~~~~~~g~g~~~~rq~~~h~H~v~~~pdg-  155 (345)
T PF10282_consen   93 AVDPDGRFLYVANYGGGSVSVFPLDDDGSLGEVV----------------QTVRHEGSGPNPDRQEGPHPHQVVFSPDG-  155 (345)
T ss_dssp             EECTTSSEEEEEETTTTEEEEEEECTTSEEEEEE----------------EEEESEEEESSTTTTSSTCEEEEEE-TTS-
T ss_pred             EEecCCCEEEEEEccCCeEEEEEccCCcccceee----------------eecccCCCCCcccccccccceeEEECCCC-
Confidence            9999999988886 48999999998742222110                00000        1223457789999998 


Q ss_pred             ceEEEE-eeCCCeEEEEecCCCc--eE--E--EeecCCcEEEEEEcCCCCEEEEEc-CCCcEEEEEeecccc-ccccccc
Q psy10867        197 KSRVAS-VSHDRTCKIFDLCTGE--DL--L--SLILDTRLTCVAFDGTEDNIYMGT-SEGVIKSFCLRQVPR-TRDHHIQ  267 (343)
Q Consensus       197 ~~~l~~-~~~d~~i~~wd~~~~~--~~--~--~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~-~~~~~~~  267 (343)
                       +++++ .-....|.+|++....  ..  .  .+......+.++|+|+++++++.. .++.|.++++..... ...... 
T Consensus       156 -~~v~v~dlG~D~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~-  233 (345)
T PF10282_consen  156 -RFVYVPDLGADRVYVYDIDDDTGKLTPVDSIKVPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQT-  233 (345)
T ss_dssp             -SEEEEEETTTTEEEEEEE-TTS-TEEEEEEEECSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEE-
T ss_pred             -CEEEEEecCCCEEEEEEEeCCCceEEEeeccccccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeecccCCceeEEEE-
Confidence             55544 4445689999997655  22  1  223567799999999999887764 578899999982211 111000 


Q ss_pred             CCCCCC-ccccccCcEEEEEEccCCCEEEEEe-CCCcEEEEecc--cc--eeeeecc-cCCceEEEEEccCCCeeeeccc
Q psy10867        268 DSTSNP-DFIGHEKQVTSLSCSITGITLLSSS-ADETLKIWHTI--SR--QCLRTIQ-HKGPVLGAFLGLLPPAIHDYDF  340 (343)
Q Consensus       268 ~~~~~~-~~~~~~~~v~~~~~s~~~~~l~s~~-~dg~i~iwd~~--~~--~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~  340 (343)
                       ...+. ... .......++++|||++|+++. .++.|.+|++.  ++  +.+..+. .....+.++++|+|++|++++.
T Consensus       234 -~~~~~~~~~-~~~~~~~i~ispdg~~lyvsnr~~~sI~vf~~d~~~g~l~~~~~~~~~G~~Pr~~~~s~~g~~l~Va~~  311 (345)
T PF10282_consen  234 -ISTLPEGFT-GENAPAEIAISPDGRFLYVSNRGSNSISVFDLDPATGTLTLVQTVPTGGKFPRHFAFSPDGRYLYVANQ  311 (345)
T ss_dssp             -EESCETTSC-SSSSEEEEEE-TTSSEEEEEECTTTEEEEEEECTTTTTEEEEEEEEESSSSEEEEEE-TTSSEEEEEET
T ss_pred             -eeecccccc-ccCCceeEEEecCCCEEEEEeccCCEEEEEEEecCCCceEEEEEEeCCCCCccEEEEeCCCCEEEEEec
Confidence             00000 111 123678899999999887654 56789999983  23  3334444 3455899999999999998764

1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.

>PRK01029 tolB translocation protein TolB; Provisional

Probab=99.69  E-value=4.8e-14  Score=118.54  Aligned_cols=218  Identities=13%  Similarity=0.083  Sum_probs=136.7

Q ss_pred             CeEEEEecCCceEEEEEecCCCCcceEEEEeCCce---EEEEEcCC--CeEEEEeCCCcccceecccCCcceEEEEECCC
Q psy10867         15 GAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDY---VLGVEKGK--PMIQAWPVNSQEKAQLRLICPGRISSMQASPD   89 (343)
Q Consensus        15 g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~---~~~~~~~~--~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~   89 (343)
                      ..|.+.|...+.. +.+..... ...+-+|+|||+   ++..+..+  ..|.+.++.+++..+.. ...+.....+|+||
T Consensus       165 ~~l~~~d~dG~~~-~~lt~~~~-~~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g~~~~lt-~~~g~~~~p~wSPD  241 (428)
T PRK01029        165 GELWSVDYDGQNL-RPLTQEHS-LSITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLENPAGKKIL-ALQGNQLMPTFSPR  241 (428)
T ss_pred             ceEEEEcCCCCCc-eEcccCCC-CcccceEccCCCceEEEEEEccCCCceEEEEECCCCCceEee-cCCCCccceEECCC
Confidence            4778888755443 34444444 667889999985   33344433  36777788877655433 34455567899999


Q ss_pred             CCEEEEec--CC--e--EEEEEccCC---ceEEEecccCCCeEEEEEecCCCEEEEec-CCCeEEEee--cCccceeeee
Q psy10867         90 AAYIAVSI--ET--K--LHMWQISSG---RLLATASSHYQPITIVKWSADSNFIVTGG-EDGTICVWQ--LSRLICKQTV  157 (343)
Q Consensus        90 ~~~l~~~~--d~--~--i~v~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~dg~i~iwd--~~~~~~~~~~  157 (343)
                      |+.|+...  +|  .  +..|++..+   +.......+.+.....+|+|||+.|+..+ .+|...+|.  +.....    
T Consensus       242 G~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~----  317 (428)
T PRK01029        242 KKLLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQ----  317 (428)
T ss_pred             CCEEEEEECCCCCcceeEEEeecccCCCCcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECccccc----
Confidence            99888532  22  3  444676653   33333333334456789999999877665 466555554  322100    


Q ss_pred             ecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCC---CeEEEEecCCCceEEEeecCCcEEEEEE
Q psy10867        158 AFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHD---RTCKIFDLCTGEDLLSLILDTRLTCVAF  234 (343)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d---~~i~~wd~~~~~~~~~~~~~~~i~~~~~  234 (343)
                                       ....+..+...+....|+|+|  +.|+..+.+   ..|.+||+.+++..........+....|
T Consensus       318 -----------------~~~~lt~~~~~~~~p~wSPDG--~~Laf~~~~~g~~~I~v~dl~~g~~~~Lt~~~~~~~~p~w  378 (428)
T PRK01029        318 -----------------SPRLLTKKYRNSSCPAWSPDG--KKIAFCSVIKGVRQICVYDLATGRDYQLTTSPENKESPSW  378 (428)
T ss_pred             -----------------ceEEeccCCCCccceeECCCC--CEEEEEEcCCCCcEEEEEECCCCCeEEccCCCCCccceEE
Confidence                             122233344566788999999  666655432   4799999988876544334446778999


Q ss_pred             cCCCCEEEEEcC---CCcEEEEEeecc
Q psy10867        235 DGTEDNIYMGTS---EGVIKSFCLRQV  258 (343)
Q Consensus       235 ~~~~~~l~~~~~---d~~i~i~d~~~~  258 (343)
                      +|||+.|+....   ...|+++|+...
T Consensus       379 SpDG~~L~f~~~~~g~~~L~~vdl~~g  405 (428)
T PRK01029        379 AIDSLHLVYSAGNSNESELYLISLITK  405 (428)
T ss_pred             CCCCCEEEEEECCCCCceEEEEECCCC
Confidence            999998875433   346778887654

>PRK04792 tolB translocation protein TolB; Provisional

Probab=99.69  E-value=3.9e-14  Score=120.06  Aligned_cols=232  Identities=15%  Similarity=0.096  Sum_probs=142.1

Q ss_pred             eEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEc-CC--CeEEEEeCCCcccceecccCCcceEEEEECCCCCE
Q psy10867         16 AISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEK-GK--PMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAY   92 (343)
Q Consensus        16 ~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~--~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~   92 (343)
                      .|.++|..... .+.+..+.. .+.+..|+|||+.++..+ .+  ..|.+||+.+++..... ...+.....+|+|||+.
T Consensus       199 ~l~i~d~dG~~-~~~l~~~~~-~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~lt-~~~g~~~~~~wSPDG~~  275 (448)
T PRK04792        199 QLMIADYDGYN-EQMLLRSPE-PLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVREKVT-SFPGINGAPRFSPDGKK  275 (448)
T ss_pred             EEEEEeCCCCC-ceEeecCCC-cccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeEEec-CCCCCcCCeeECCCCCE
Confidence            67777875443 344555555 788999999997666543 22  36888899887654322 22334457899999998


Q ss_pred             EEE--ecCC--eEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecC-CC--eEEEeecCccceeeeeecCCCCCC
Q psy10867         93 IAV--SIET--KLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGE-DG--TICVWQLSRLICKQTVAFGIPGSS  165 (343)
Q Consensus        93 l~~--~~d~--~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-dg--~i~iwd~~~~~~~~~~~~~~~~~~  165 (343)
                      |+.  ..++  .|+++|+.+++.. .+..+........|+||++.|+..+. ++  .|.++|+.+++..           
T Consensus       276 La~~~~~~g~~~Iy~~dl~tg~~~-~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~~-----------  343 (448)
T PRK04792        276 LALVLSKDGQPEIYVVDIATKALT-RITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKVS-----------  343 (448)
T ss_pred             EEEEEeCCCCeEEEEEECCCCCeE-ECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEE-----------
Confidence            874  3455  5888898877654 44455556678899999998776553 34  4666677654321           


Q ss_pred             CCccccccceeeeecccccceEEEEeecCCCceEEEEeeC-CC--eEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEE
Q psy10867        166 GKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSH-DR--TCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIY  242 (343)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~-d~--~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~  242 (343)
                                  .+..........+|+|++  ++++..+. ++  .|.++|+.+++... +..........|+|+|+.|+
T Consensus       344 ------------~Lt~~g~~~~~~~~SpDG--~~l~~~~~~~g~~~I~~~dl~~g~~~~-lt~~~~d~~ps~spdG~~I~  408 (448)
T PRK04792        344 ------------RLTFEGEQNLGGSITPDG--RSMIMVNRTNGKFNIARQDLETGAMQV-LTSTRLDESPSVAPNGTMVI  408 (448)
T ss_pred             ------------EEecCCCCCcCeeECCCC--CEEEEEEecCCceEEEEEECCCCCeEE-ccCCCCCCCceECCCCCEEE
Confidence                        111112223456899999  55555443 44  46667887776432 22222223458999999887


Q ss_pred             EEcC-CCc--EEEEEeecccccccccccCCCCCCccccccCcEEEEEEcc
Q psy10867        243 MGTS-EGV--IKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSI  289 (343)
Q Consensus       243 ~~~~-d~~--i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~  289 (343)
                      .... ++.  +++++.....            ...+..+.+.+...+|+|
T Consensus       409 ~~~~~~g~~~l~~~~~~G~~------------~~~l~~~~g~~~~p~Wsp  446 (448)
T PRK04792        409 YSTTYQGKQVLAAVSIDGRF------------KARLPAGQGEVKSPAWSP  446 (448)
T ss_pred             EEEecCCceEEEEEECCCCc------------eEECcCCCCCcCCCccCC
Confidence            7554 333  5666653221            222333445566777776

>PRK01029 tolB translocation protein TolB; Provisional

Probab=99.69  E-value=7.5e-14  Score=117.40  Aligned_cols=240  Identities=14%  Similarity=0.071  Sum_probs=147.6

Q ss_pred             CeEEEEeCCCcccceecccCCcceEEEEECCCCCE--E-EEec-C--CeEEEEEccCCceEEEecccCCCeEEEEEecCC
Q psy10867         58 PMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAY--I-AVSI-E--TKLHMWQISSGRLLATASSHYQPITIVKWSADS  131 (343)
Q Consensus        58 ~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~--l-~~~~-d--~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~  131 (343)
                      ..|.+.|.+.+.... +.........-+|+|||+.  + ..+. +  ..|++.++.+++... +....+......|+|||
T Consensus       165 ~~l~~~d~dG~~~~~-lt~~~~~~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g~~~~-lt~~~g~~~~p~wSPDG  242 (428)
T PRK01029        165 GELWSVDYDGQNLRP-LTQEHSLSITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLENPAGKK-ILALQGNQLMPTFSPRK  242 (428)
T ss_pred             ceEEEEcCCCCCceE-cccCCCCcccceEccCCCceEEEEEEccCCCceEEEEECCCCCceE-eecCCCCccceEECCCC
Confidence            367777777665443 3334556678899999974  2 2332 2  378899998776543 33344455678999999


Q ss_pred             CEEEEecC-CC----eEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEee-C
Q psy10867        132 NFIVTGGE-DG----TICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVS-H  205 (343)
Q Consensus       132 ~~l~s~~~-dg----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~-~  205 (343)
                      +.|+..+. +|    .+.+|++..+...                   ++..............+|+|+|  +.|+..+ .
T Consensus       243 ~~Laf~s~~~g~~di~~~~~~~~~g~~g-------------------~~~~lt~~~~~~~~~p~wSPDG--~~Laf~s~~  301 (428)
T PRK01029        243 KLLAFISDRYGNPDLFIQSFSLETGAIG-------------------KPRRLLNEAFGTQGNPSFSPDG--TRLVFVSNK  301 (428)
T ss_pred             CEEEEEECCCCCcceeEEEeecccCCCC-------------------cceEeecCCCCCcCCeEECCCC--CEEEEEECC
Confidence            98876553 23    3444666542100                   1122222222344678999999  5555544 4


Q ss_pred             CCeEEEE--ecCC-CceEEEee-cCCcEEEEEEcCCCCEEEEEcCC---CcEEEEEeecccccccccccCCCCCCccccc
Q psy10867        206 DRTCKIF--DLCT-GEDLLSLI-LDTRLTCVAFDGTEDNIYMGTSE---GVIKSFCLRQVPRTRDHHIQDSTSNPDFIGH  278 (343)
Q Consensus       206 d~~i~~w--d~~~-~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d---~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~  278 (343)
                      +|...+|  ++.. +.....+. ....+....|+|||+.|+....+   ..|.+||+.+.....            +...
T Consensus       302 ~g~~~ly~~~~~~~g~~~~~lt~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~~~------------Lt~~  369 (428)
T PRK01029        302 DGRPRIYIMQIDPEGQSPRLLTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGRDYQ------------LTTS  369 (428)
T ss_pred             CCCceEEEEECcccccceEEeccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCCeEE------------ccCC
Confidence            6654555  4432 22233333 34456788999999988876543   368899987654321            2112


Q ss_pred             cCcEEEEEEccCCCEEEEEeC---CCcEEEEecccceeeeecccCCceEEEEEccCC
Q psy10867        279 EKQVTSLSCSITGITLLSSSA---DETLKIWHTISRQCLRTIQHKGPVLGAFLGLLP  332 (343)
Q Consensus       279 ~~~v~~~~~s~~~~~l~s~~~---dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~  332 (343)
                      ...+....|+|||+.|+..+.   ...|+++|+..++........+.+...+|+|-.
T Consensus       370 ~~~~~~p~wSpDG~~L~f~~~~~g~~~L~~vdl~~g~~~~Lt~~~g~~~~p~Ws~~~  426 (428)
T PRK01029        370 PENKESPSWAIDSLHLVYSAGNSNESELYLISLITKKTRKIVIGSGEKRFPSWGAFP  426 (428)
T ss_pred             CCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEEeecCCCcccCceecCCC
Confidence            234567899999998774432   357889999887765555566677888999864

>KOG2315|consensus

Probab=99.69  E-value=6.2e-14  Score=113.65  Aligned_cols=275  Identities=16%  Similarity=0.180  Sum_probs=184.1

Q ss_pred             CeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCC--CE
Q psy10867         15 GAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDA--AY   92 (343)
Q Consensus        15 g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~--~~   92 (343)
                      -.+.+|+++++.....+..... .-.+..|++|..+.+--.. +.+++|+..+.+.+. ..-|...|+.+.+||.+  ..
T Consensus       105 pn~~v~~vet~~~~s~~q~k~Q-~~W~~qfs~dEsl~arlv~-nev~f~~~~~f~~~~-~kl~~~~i~~f~lSpgp~~~~  181 (566)
T KOG2315|consen  105 PNVLVYNVETGVQRSQIQKKMQ-NGWVPQFSIDESLAARLVS-NEVQFYDLGSFKTIQ-HKLSVSGITMLSLSPGPEPPF  181 (566)
T ss_pred             Cceeeeeeccceehhheehhhh-cCcccccccchhhhhhhhc-ceEEEEecCCcccee-eeeeccceeeEEecCCCCCce
Confidence            4578999999766666665443 3368999999887776666 789999998855442 23467889999999874  46


Q ss_pred             EEE---ecC---CeEEEEEccCCceEEEec---ccCCCeEEEEEecCCCEE-E--EecCC---------CeEEEeecCcc
Q psy10867         93 IAV---SIE---TKLHMWQISSGRLLATAS---SHYQPITIVKWSADSNFI-V--TGGED---------GTICVWQLSRL  151 (343)
Q Consensus        93 l~~---~~d---~~i~v~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l-~--s~~~d---------g~i~iwd~~~~  151 (343)
                      +|+   ..+   ..++||.......-..+.   -....=..+.|++-|.-| +  +...|         .++++.+++..
T Consensus       182 vAvyvPe~kGaPa~vri~~~~~~~~~~~~a~ksFFkadkvqm~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~g~  261 (566)
T KOG2315|consen  182 VAVYVPEKKGAPASVRIYKYPEEGQHQPVANKSFFKADKVQMKWNKLGTALLVLASTDVDKTNASYYGEQTLYLLATQGE  261 (566)
T ss_pred             EEEEccCCCCCCcEEEEeccccccccchhhhccccccceeEEEeccCCceEEEEEEEeecCCCccccccceEEEEEecCc
Confidence            664   333   479999876332211111   112223467888766522 2  22222         35677776632


Q ss_pred             ceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCCcEEE
Q psy10867        152 ICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTC  231 (343)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~~  231 (343)
                      .                       ...--...++|.++.|+|++...-++.|-.-..+.+||++ +..+..+ .+++-++
T Consensus       262 s-----------------------~~V~L~k~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr-~~~v~df-~egpRN~  316 (566)
T KOG2315|consen  262 S-----------------------VSVPLLKEGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLR-GKPVFDF-PEGPRNT  316 (566)
T ss_pred             e-----------------------EEEecCCCCCceEEEECCCCCEEEEEEecccceEEEEcCC-CCEeEeC-CCCCccc
Confidence            2                       1222235789999999999964445556778899999975 4454443 4566788


Q ss_pred             EEEcCCCCEEEEEcC---CCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeC------CCc
Q psy10867        232 VAFDGTEDNIYMGTS---EGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSA------DET  302 (343)
Q Consensus       232 ~~~~~~~~~l~~~~~---d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~------dg~  302 (343)
                      +-|+|.|++++.++-   .|.|-+||+.+.+..           ..+..  ..-+-+.|+|||+++++++.      |+.
T Consensus       317 ~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~K~i-----------~~~~a--~~tt~~eW~PdGe~flTATTaPRlrvdNg  383 (566)
T KOG2315|consen  317 AFFNPHGNIILLAGFGNLPGDMEVWDVPNRKLI-----------AKFKA--ANTTVFEWSPDGEYFLTATTAPRLRVDNG  383 (566)
T ss_pred             eEECCCCCEEEEeecCCCCCceEEEeccchhhc-----------ccccc--CCceEEEEcCCCcEEEEEeccccEEecCC
Confidence            999999999988654   579999999885442           23332  23455789999999998864      688


Q ss_pred             EEEEecccceeeeecccCCceEEEEEccC
Q psy10867        303 LKIWHTISRQCLRTIQHKGPVLGAFLGLL  331 (343)
Q Consensus       303 i~iwd~~~~~~~~~~~~~~~v~~~~~sp~  331 (343)
                      ++||++ +|..+...........+.|-|-
T Consensus       384 ~Kiwhy-tG~~l~~~~f~sEL~qv~W~P~  411 (566)
T KOG2315|consen  384 IKIWHY-TGSLLHEKMFKSELLQVEWRPF  411 (566)
T ss_pred             eEEEEe-cCceeehhhhhHhHhheeeeec
Confidence            999997 6777666553336677777653

>KOG0280|consensus

Probab=99.67  E-value=3.3e-14  Score=106.21  Aligned_cols=272  Identities=16%  Similarity=0.116  Sum_probs=181.7

Q ss_pred             CCeEEEEecCCceEEE--EEecCCCCcceEEEEeC---Cce-EEEEEcCCCeEEEEeCCCcccceecccCC------cce
Q psy10867         14 SGAISVWEPKGGTLLM--SYKGASVLSPHSMCLLG---NDY-VLGVEKGKPMIQAWPVNSQEKAQLRLICP------GRI   81 (343)
Q Consensus        14 dg~i~iwd~~~~~~~~--~~~~~~~~~v~~~~~~~---~~~-~~~~~~~~~~i~iw~~~~~~~~~~~~~~~------~~v   81 (343)
                      .|.+.++++...+...  +++.-....+..+.|.-   +|. .++-+..+|.|.++.....+....+.+-.      ...
T Consensus        45 ~Gkl~Lys~~d~~~~~l~~~q~~dts~~~dm~w~~~~~~g~~~l~~a~a~G~i~~~r~~~~~ss~~L~~ls~~ki~~~~~  124 (339)
T KOG0280|consen   45 SGKLHLYSLEDMKLSPLDTLQCTDTSTEFDMLWRIRETDGDFNLLDAHARGQIQLYRNDEDESSVHLRGLSSKKISVVEA  124 (339)
T ss_pred             ccceEEEeecccccCccceeeeecccccceeeeeeccCCccceeeeccccceEEEEeeccceeeeeecccchhhhhheee
Confidence            4788899887654433  23222111567777762   343 55556666999999766544333222211      124


Q ss_pred             EEEEECCCCCEEEEe-cCCeEEEEEccCCce--EEEecccCCCeEEEEEec-CCCEEEEecCCCeEEEeecCccceeeee
Q psy10867         82 SSMQASPDAAYIAVS-IETKLHMWQISSGRL--LATASSHYQPITIVKWSA-DSNFIVTGGEDGTICVWQLSRLICKQTV  157 (343)
Q Consensus        82 ~~~~~s~~~~~l~~~-~d~~i~v~~~~~~~~--~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~  157 (343)
                      .++.|++.+.-++++ .+|.+.+-+......  ++..+.|.-+.+-..|+. +.+.+++|+.|+.+..||++.... .  
T Consensus       125 lslD~~~~~~~i~vs~s~G~~~~v~~t~~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~-~--  201 (339)
T KOG0280|consen  125 LSLDISTSGTKIFVSDSRGSISGVYETEMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKT-F--  201 (339)
T ss_pred             eEEEeeccCceEEEEcCCCcEEEEecceeeeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCcc-e--
Confidence            577888888877775 567888666555543  347889999999999976 567899999999999999994321 0  


Q ss_pred             ecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecC-CCceEEEeecCCcEEEEEEcC
Q psy10867        158 AFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLC-TGEDLLSLILDTRLTCVAFDG  236 (343)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~-~~~~~~~~~~~~~i~~~~~~~  236 (343)
                                       ..+..+.|...|.+|.-+|..+ .++++|+.|-.|++||.+ -++++..-...+.|+.+..+|
T Consensus       202 -----------------i~~n~kvH~~GV~SI~ss~~~~-~~I~TGsYDe~i~~~DtRnm~kPl~~~~v~GGVWRi~~~p  263 (339)
T KOG0280|consen  202 -----------------IWHNSKVHTSGVVSIYSSPPKP-TYIATGSYDECIRVLDTRNMGKPLFKAKVGGGVWRIKHHP  263 (339)
T ss_pred             -----------------eeecceeeecceEEEecCCCCC-ceEEEeccccceeeeehhcccCccccCccccceEEEEecc
Confidence                             2233456889999999988754 799999999999999999 567777777789999999999


Q ss_pred             CCC-EEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEe-CCCcEE-EEecccce
Q psy10867        237 TED-NIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSS-ADETLK-IWHTISRQ  312 (343)
Q Consensus       237 ~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~-~dg~i~-iwd~~~~~  312 (343)
                      .-. .++.++.-+-.+|-+.+.......      ......+.|.+-...-.|.....+||+++ .|..++ +|-.-+++
T Consensus       264 ~~~~~lL~~CMh~G~ki~~~~~~~~e~~------~~~~s~~~hdSl~YG~DWd~~~~~lATCsFYDk~~~~~Wl~~t~~  336 (339)
T KOG0280|consen  264 EIFHRLLAACMHNGAKILDSSDKVLEFQ------IVLPSDKIHDSLCYGGDWDSKDSFLATCSFYDKKIRQLWLHITGE  336 (339)
T ss_pred             hhhhHHHHHHHhcCceEEEecccccchh------eeeeccccccceeeccccccccceeeeeeccccceeeeeeeccCC
Confidence            543 344444545567777665332211      11344556777677777755556788875 466644 66554443

>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]

Probab=99.67  E-value=3.7e-12  Score=98.45  Aligned_cols=288  Identities=10%  Similarity=0.119  Sum_probs=185.4

Q ss_pred             CCCeEEEEecCC--ceEE-EEEecCCCCcceEEEEeCCceEEEEEcC---CCeEEEEeCCC--ccccee--cccCCcceE
Q psy10867         13 GSGAISVWEPKG--GTLL-MSYKGASVLSPHSMCLLGNDYVLGVEKG---KPMIQAWPVNS--QEKAQL--RLICPGRIS   82 (343)
Q Consensus        13 ~dg~i~iwd~~~--~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~~---~~~i~iw~~~~--~~~~~~--~~~~~~~v~   82 (343)
                      .+.-|++|++.+  |+.- ..+-.... .++-++++|+++.|.++..   +|.|.-|.++.  |+....  ......+-.
T Consensus        14 ~s~gI~v~~ld~~~g~l~~~~~v~~~~-nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~   92 (346)
T COG2706          14 ESQGIYVFNLDTKTGELSLLQLVAELG-NPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPPC   92 (346)
T ss_pred             CCCceEEEEEeCcccccchhhhccccC-CCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCCCe
Confidence            356799999874  3221 11223344 7899999999966655433   47788777764  443311  112223347


Q ss_pred             EEEECCCCCEEEEe--cCCeEEEEEccC-CceEE--EecccCCC----------eEEEEEecCCCEEEEecC-CCeEEEe
Q psy10867         83 SMQASPDAAYIAVS--IETKLHMWQISS-GRLLA--TASSHYQP----------ITIVKWSADSNFIVTGGE-DGTICVW  146 (343)
Q Consensus        83 ~~~~s~~~~~l~~~--~d~~i~v~~~~~-~~~~~--~~~~~~~~----------v~~~~~~~~~~~l~s~~~-dg~i~iw  146 (343)
                      .++++++|++|+++  ..|.|.++-+++ |.+..  ....|.+.          +....+.|++++|++..- --.|.+|
T Consensus        93 yvsvd~~g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri~~y  172 (346)
T COG2706          93 YVSVDEDGRFVFVANYHSGSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRIFLY  172 (346)
T ss_pred             EEEECCCCCEEEEEEccCceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCceEEEE
Confidence            89999999999974  458999999865 43321  12234444          888999999999988763 2369999


Q ss_pred             ecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEee-CCCeEEEEecCCC-ceEEEee
Q psy10867        147 QLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVS-HDRTCKIFDLCTG-EDLLSLI  224 (343)
Q Consensus       147 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~-~d~~i~~wd~~~~-~~~~~~~  224 (343)
                      ++..+......                 +..  -......+.|.|+|++  ++..... -+++|.+|..... ..+..++
T Consensus       173 ~~~dg~L~~~~-----------------~~~--v~~G~GPRHi~FHpn~--k~aY~v~EL~stV~v~~y~~~~g~~~~lQ  231 (346)
T COG2706         173 DLDDGKLTPAD-----------------PAE--VKPGAGPRHIVFHPNG--KYAYLVNELNSTVDVLEYNPAVGKFEELQ  231 (346)
T ss_pred             EcccCcccccc-----------------ccc--cCCCCCcceEEEcCCC--cEEEEEeccCCEEEEEEEcCCCceEEEee
Confidence            99876443321                 111  1345667899999999  5655544 4899999998763 2222221


Q ss_pred             ----------cCCcEEEEEEcCCCCEEEEEcC-CCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCE
Q psy10867        225 ----------LDTRLTCVAFDGTEDNIYMGTS-EGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGIT  293 (343)
Q Consensus       225 ----------~~~~i~~~~~~~~~~~l~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~  293 (343)
                                .......+.++|+|++|+++.. ...|.+|.+.........       +.....+........|+|.+++
T Consensus       232 ~i~tlP~dF~g~~~~aaIhis~dGrFLYasNRg~dsI~~f~V~~~~g~L~~-------~~~~~teg~~PR~F~i~~~g~~  304 (346)
T COG2706         232 TIDTLPEDFTGTNWAAAIHISPDGRFLYASNRGHDSIAVFSVDPDGGKLEL-------VGITPTEGQFPRDFNINPSGRF  304 (346)
T ss_pred             eeccCccccCCCCceeEEEECCCCCEEEEecCCCCeEEEEEEcCCCCEEEE-------EEEeccCCcCCccceeCCCCCE
Confidence                      2456788999999999999854 347888877654322111       2222334445788899999999


Q ss_pred             EEEEeCC-CcEEEEecc--cceeeeecc--cCCceEEEEEc
Q psy10867        294 LLSSSAD-ETLKIWHTI--SRQCLRTIQ--HKGPVLGAFLG  329 (343)
Q Consensus       294 l~s~~~d-g~i~iwd~~--~~~~~~~~~--~~~~v~~~~~s  329 (343)
                      |+++..+ ..|.+|.+.  +|++-....  ......|+.|.
T Consensus       305 Liaa~q~sd~i~vf~~d~~TG~L~~~~~~~~~p~Pvcv~f~  345 (346)
T COG2706         305 LIAANQKSDNITVFERDKETGRLTLLGRYAVVPEPVCVKFL  345 (346)
T ss_pred             EEEEccCCCcEEEEEEcCCCceEEecccccCCCCcEEEEEc
Confidence            9988765 468888654  565544333  44455666664

>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]

Probab=99.67  E-value=1.2e-13  Score=110.83  Aligned_cols=285  Identities=11%  Similarity=0.129  Sum_probs=196.8

Q ss_pred             EEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-e
Q psy10867         18 SVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-S   96 (343)
Q Consensus        18 ~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~   96 (343)
                      ..|+..+...-..+....- ++..+++||.|.++++... ..|.+|.-..+..+..+ .| ..|..+.|+|.+++|.+ .
T Consensus        15 ~f~~~~s~~~~~~~~~~~~-p~~~~~~SP~G~~l~~~~~-~~V~~~~g~~~~~l~~~-~~-~~V~~~~fSP~~kYL~tw~   90 (561)
T COG5354          15 VFWNSQSEVIHTRFESENW-PVAYVSESPLGTYLFSEHA-AGVECWGGPSKAKLVRF-RH-PDVKYLDFSPNEKYLVTWS   90 (561)
T ss_pred             EeecCccccccccccccCc-chhheeecCcchheehhhc-cceEEccccchhheeee-ec-CCceecccCcccceeeeec
Confidence            4455555554445554444 8999999999999999988 67999998877644322 33 46899999999999997 3


Q ss_pred             c---------------CCeEEEEEccCCceEEEecccCCC--eE-EEEEecCCCEEEEecCCCeEEEeecCccceeeeee
Q psy10867         97 I---------------ETKLHMWQISSGRLLATASSHYQP--IT-IVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVA  158 (343)
Q Consensus        97 ~---------------d~~i~v~~~~~~~~~~~~~~~~~~--v~-~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~  158 (343)
                      .               ++.+.+||+.+|.++..+..-..+  .+ -+.|+.+.++++-. ....+.++++ +.....   
T Consensus        91 ~~pi~~pe~e~sp~~~~n~~~vwd~~sg~iv~sf~~~~q~~~~Wp~~k~s~~D~y~ARv-v~~sl~i~e~-t~n~~~---  165 (561)
T COG5354          91 REPIIEPEIEISPFTSKNNVFVWDIASGMIVFSFNGISQPYLGWPVLKFSIDDKYVARV-VGSSLYIHEI-TDNIEE---  165 (561)
T ss_pred             cCCccChhhccCCccccCceeEEeccCceeEeeccccCCcccccceeeeeecchhhhhh-ccCeEEEEec-CCcccc---
Confidence            2               235999999999999988766555  44 67888888876655 3357999997 332111   


Q ss_pred             cCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEE-----eeCCCeEEEEecCCCceEEEee-cCCcEEEE
Q psy10867        159 FGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVAS-----VSHDRTCKIFDLCTGEDLLSLI-LDTRLTCV  232 (343)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~-----~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~  232 (343)
                                     .+...++  ...|....++|.+++..|+.     ...++.+++|.+..+..+.+.. ....-..+
T Consensus       166 ---------------~p~~~lr--~~gi~dFsisP~~n~~~la~~tPEk~~kpa~~~i~sIp~~s~l~tk~lfk~~~~qL  228 (561)
T COG5354         166 ---------------HPFKNLR--PVGILDFSISPEGNHDELAYWTPEKLNKPAMVRILSIPKNSVLVTKNLFKVSGVQL  228 (561)
T ss_pred             ---------------Cchhhcc--ccceeeEEecCCCCCceEEEEccccCCCCcEEEEEEccCCCeeeeeeeEeecccEE
Confidence                           0222221  35678888999865455553     5668899999998777766554 34445678


Q ss_pred             EEcCCCCEEEEEc-----------CCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEE--eC
Q psy10867        233 AFDGTEDNIYMGT-----------SEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSS--SA  299 (343)
Q Consensus       233 ~~~~~~~~l~~~~-----------~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~--~~  299 (343)
                      .|.+.|++|++-.           ....++++++......            ...+-.++|...+|.|+++.+++.  -.
T Consensus       229 kW~~~g~~ll~l~~t~~ksnKsyfgesnLyl~~~~e~~i~------------V~~~~~~pVhdf~W~p~S~~F~vi~g~~  296 (561)
T COG5354         229 KWQVLGKYLLVLVMTHTKSNKSYFGESNLYLLRITERSIP------------VEKDLKDPVHDFTWEPLSSRFAVISGYM  296 (561)
T ss_pred             EEecCCceEEEEEEEeeecccceeccceEEEEeecccccc------------eeccccccceeeeecccCCceeEEeccc
Confidence            8999998877531           1245778877743221            122457899999999998877654  47


Q ss_pred             CCcEEEEecccceeeeecccCCceEEEEEccCCCeeeecccCC
Q psy10867        300 DETLKIWHTISRQCLRTIQHKGPVLGAFLGLLPPAIHDYDFTP  342 (343)
Q Consensus       300 dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~~  342 (343)
                      +-.+.++|++.. ....+ ....=..+.|+|.+++++.+++.+
T Consensus       297 pa~~s~~~lr~N-l~~~~-Pe~~rNT~~fsp~~r~il~agF~n  337 (561)
T COG5354         297 PASVSVFDLRGN-LRFYF-PEQKRNTIFFSPHERYILFAGFDN  337 (561)
T ss_pred             ccceeecccccc-eEEec-CCcccccccccCcccEEEEecCCc
Confidence            788999998754 33332 444556678889888888877754

>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL

Probab=99.64  E-value=7e-13  Score=110.97  Aligned_cols=282  Identities=13%  Similarity=0.119  Sum_probs=174.2

Q ss_pred             eEEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEE
Q psy10867          6 EVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQ   85 (343)
Q Consensus         6 ~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~   85 (343)
                      ..+|.++.+|.|..+|..+|+.+.+++.... ....+... ++.++ .+..++.+..+|..+++.+..... .+.+.+.-
T Consensus        66 ~~v~v~~~~g~v~a~d~~tG~~~W~~~~~~~-~~~~p~v~-~~~v~-v~~~~g~l~ald~~tG~~~W~~~~-~~~~~~~p  141 (377)
T TIGR03300        66 GKVYAADADGTVVALDAETGKRLWRVDLDER-LSGGVGAD-GGLVF-VGTEKGEVIALDAEDGKELWRAKL-SSEVLSPP  141 (377)
T ss_pred             CEEEEECCCCeEEEEEccCCcEeeeecCCCC-cccceEEc-CCEEE-EEcCCCEEEEEECCCCcEeeeecc-CceeecCC
Confidence            4567777789999999999999988776654 22333332 44444 444559999999999887643322 22222211


Q ss_pred             ECCCCCEEEEecCCeEEEEEccCCceEEEecccCCCeE-----EEEEecCCCEEEEecCCCeEEEeecCccceeeeeecC
Q psy10867         86 ASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPIT-----IVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFG  160 (343)
Q Consensus        86 ~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~~~~~~v~-----~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~  160 (343)
                      ...++.+++.+.++.++.||.++|+.+..+........     ....  .+..++.+..+|.+..+|.++++........
T Consensus       142 ~v~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~~~~~sp~~--~~~~v~~~~~~g~v~ald~~tG~~~W~~~~~  219 (377)
T TIGR03300       142 LVANGLVVVRTNDGRLTALDAATGERLWTYSRVTPALTLRGSASPVI--ADGGVLVGFAGGKLVALDLQTGQPLWEQRVA  219 (377)
T ss_pred             EEECCEEEEECCCCeEEEEEcCCCceeeEEccCCCceeecCCCCCEE--ECCEEEEECCCCEEEEEEccCCCEeeeeccc
Confidence            11255566667889999999999988776654322111     1112  2346778888899999999988765543211


Q ss_pred             CCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCE
Q psy10867        161 IPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDN  240 (343)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~  240 (343)
                      .+....        ....+...   .....+.  +  ..++.++.+|.++.||.++++.+........ ....  ..+..
T Consensus       220 ~~~g~~--------~~~~~~~~---~~~p~~~--~--~~vy~~~~~g~l~a~d~~tG~~~W~~~~~~~-~~p~--~~~~~  281 (377)
T TIGR03300       220 LPKGRT--------ELERLVDV---DGDPVVD--G--GQVYAVSYQGRVAALDLRSGRVLWKRDASSY-QGPA--VDDNR  281 (377)
T ss_pred             cCCCCC--------chhhhhcc---CCccEEE--C--CEEEEEEcCCEEEEEECCCCcEEEeeccCCc-cCce--EeCCE
Confidence            000000        00000000   0011111  2  4677788899999999999998877653221 1222  24678


Q ss_pred             EEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc-c
Q psy10867        241 IYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-H  319 (343)
Q Consensus       241 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~  319 (343)
                      +++++.+|.++.+|..+.+......        .+.  .....+...  .+..|++++.+|.|+++|..+|+.+.+++ +
T Consensus       282 vyv~~~~G~l~~~d~~tG~~~W~~~--------~~~--~~~~ssp~i--~g~~l~~~~~~G~l~~~d~~tG~~~~~~~~~  349 (377)
T TIGR03300       282 LYVTDADGVVVALDRRSGSELWKND--------ELK--YRQLTAPAV--VGGYLVVGDFEGYLHWLSREDGSFVARLKTD  349 (377)
T ss_pred             EEEECCCCeEEEEECCCCcEEEccc--------ccc--CCccccCEE--ECCEEEEEeCCCEEEEEECCCCCEEEEEEcC
Confidence            8888999999999998765433210        011  111112222  35688899999999999999999999887 4


Q ss_pred             CCce
Q psy10867        320 KGPV  323 (343)
Q Consensus       320 ~~~v  323 (343)
                      ...+
T Consensus       350 ~~~~  353 (377)
T TIGR03300       350 GSGI  353 (377)
T ss_pred             CCcc
Confidence            4343

Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.

>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain

Probab=99.64  E-value=5.5e-12  Score=101.21  Aligned_cols=253  Identities=8%  Similarity=-0.052  Sum_probs=154.3

Q ss_pred             CeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE--e---------cCCeEEEEEccCCceEEEecccCC------
Q psy10867         58 PMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV--S---------IETKLHMWQISSGRLLATASSHYQ------  120 (343)
Q Consensus        58 ~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~--~---------~d~~i~v~~~~~~~~~~~~~~~~~------  120 (343)
                      +.|.+.|..+++.+........+ ..+ ++||++.|..  +         .+..|.+||..+.+.+..+.-...      
T Consensus        27 ~~v~ViD~~~~~v~g~i~~G~~P-~~~-~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~~~~~  104 (352)
T TIGR02658        27 TQVYTIDGEAGRVLGMTDGGFLP-NPV-VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPRFLVG  104 (352)
T ss_pred             ceEEEEECCCCEEEEEEEccCCC-cee-ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCchhhcc
Confidence            78999999998887655433322 234 9999987775  4         467999999999999888763221      


Q ss_pred             -CeEEEEEecCCCEEEEec-C-CCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCc
Q psy10867        121 -PITIVKWSADSNFIVTGG-E-DGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAK  197 (343)
Q Consensus       121 -~v~~~~~~~~~~~l~s~~-~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  197 (343)
                       ....++++|||++++... . +..|.+.|+.+++...++..+.             ....+.  ...-..+..+.|+. 
T Consensus       105 ~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~~kvv~ei~vp~-------------~~~vy~--t~e~~~~~~~~Dg~-  168 (352)
T TIGR02658       105 TYPWMTSLTPDNKTLLFYQFSPSPAVGVVDLEGKAFVRMMDVPD-------------CYHIFP--TANDTFFMHCRDGS-  168 (352)
T ss_pred             CccceEEECCCCCEEEEecCCCCCEEEEEECCCCcEEEEEeCCC-------------CcEEEE--ecCCccEEEeecCc-
Confidence             234789999999998776 3 6899999999988777654210             000000  00111122223331 


Q ss_pred             eEEEEeeCCCeEEEEecCCCceEEEeec------CCcEEEEEEcC-CCCEEEEEcCCCcEEEEEeecccccccccccCCC
Q psy10867        198 SRVASVSHDRTCKIFDLCTGEDLLSLIL------DTRLTCVAFDG-TEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDST  270 (343)
Q Consensus       198 ~~l~~~~~d~~i~~wd~~~~~~~~~~~~------~~~i~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~  270 (343)
                      ...++-..+|....   .+   ...+..      ..+    .|.+ +++++++... |.|++.|+...............
T Consensus       169 ~~~v~~d~~g~~~~---~~---~~vf~~~~~~v~~rP----~~~~~dg~~~~vs~e-G~V~~id~~~~~~~~~~~~~~~~  237 (352)
T TIGR02658       169 LAKVGYGTKGNPKI---KP---TEVFHPEDEYLINHP----AYSNKSGRLVWPTYT-GKIFQIDLSSGDAKFLPAIEAFT  237 (352)
T ss_pred             eEEEEecCCCceEE---ee---eeeecCCccccccCC----ceEcCCCcEEEEecC-CeEEEEecCCCcceecceeeecc
Confidence            11122222232110   00   000111      122    4456 8888888877 99999997543221111000000


Q ss_pred             C-CCccccccCcEEEEEEccCCCEEEEEeC----------CCcEEEEecccceeeeecccCCceEEEEEccCCC-eeeec
Q psy10867        271 S-NPDFIGHEKQVTSLSCSITGITLLSSSA----------DETLKIWHTISRQCLRTIQHKGPVLGAFLGLLPP-AIHDY  338 (343)
Q Consensus       271 ~-~~~~~~~~~~v~~~~~s~~~~~l~s~~~----------dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~-~l~~~  338 (343)
                      . ...-.-..+.+.-++++|+++.++....          .+.|.++|..+++.+..+.....+..++++||++ +|++.
T Consensus       238 ~~~~~~~wrP~g~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t~kvi~~i~vG~~~~~iavS~Dgkp~lyvt  317 (352)
T TIGR02658       238 EAEKADGWRPGGWQQVAYHRARDRIYLLADQRAKWTHKTASRFLFVVDAKTGKRLRKIELGHEIDSINVSQDAKPLLYAL  317 (352)
T ss_pred             ccccccccCCCcceeEEEcCCCCEEEEEecCCccccccCCCCEEEEEECCCCeEEEEEeCCCceeeEEECCCCCeEEEEe
Confidence            0 0000012233445999999998877431          2479999999999999999788999999999999 77766


Q ss_pred             c
Q psy10867        339 D  339 (343)
Q Consensus       339 ~  339 (343)
                      +
T Consensus       318 n  318 (352)
T TIGR02658       318 S  318 (352)
T ss_pred             C
Confidence            5

This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.

>KOG2314|consensus

Probab=99.63  E-value=1.2e-12  Score=106.34  Aligned_cols=288  Identities=11%  Similarity=0.095  Sum_probs=183.8

Q ss_pred             eEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcC-----------CCeEEEEeCCCcccceecccCCc--ce-
Q psy10867         16 AISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKG-----------KPMIQAWPVNSQEKAQLRLICPG--RI-   81 (343)
Q Consensus        16 ~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-----------~~~i~iw~~~~~~~~~~~~~~~~--~v-   81 (343)
                      -|.+|--.+-..++.|.+ .  .|.-+.|||+.++|++-+.           ...++|||+.+|...+.+....+  .+ 
T Consensus       232 GI~lWGG~~f~r~~RF~H-p--~Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~IWDI~tG~lkrsF~~~~~~~~~W  308 (698)
T KOG2314|consen  232 GIALWGGESFDRIQRFYH-P--GVQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLIIWDIATGLLKRSFPVIKSPYLKW  308 (698)
T ss_pred             ceeeecCccHHHHHhccC-C--CceeeecCCccceEEEecCCccccCcccCCCceEEEEEccccchhcceeccCCCcccc
Confidence            366776555555555543 3  6789999999998887542           14799999999998866654222  22 


Q ss_pred             EEEEECCCCCEEEEecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecC-----CCeEEEeecCccceeee
Q psy10867         82 SSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGE-----DGTICVWQLSRLICKQT  156 (343)
Q Consensus        82 ~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-----dg~i~iwd~~~~~~~~~  156 (343)
                      .-+.||.|++++|.-..+.|.||+..+-.++..-.-.-..|....|+|.++.||-=..     -..+.+-.+.+++.+++
T Consensus       309 P~frWS~DdKy~Arm~~~sisIyEtpsf~lld~Kslki~gIr~FswsP~~~llAYwtpe~~~~parvtL~evPs~~~iRt  388 (698)
T KOG2314|consen  309 PIFRWSHDDKYFARMTGNSISIYETPSFMLLDKKSLKISGIRDFSWSPTSNLLAYWTPETNNIPARVTLMEVPSKREIRT  388 (698)
T ss_pred             ceEEeccCCceeEEeccceEEEEecCceeeecccccCCccccCcccCCCcceEEEEcccccCCcceEEEEecCccceeee
Confidence            3468999999999855588999997764443322223457889999999887775332     12355555555433332


Q ss_pred             eecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEE----------eeCCCeEEEEecCCCc-eEEEeec
Q psy10867        157 VAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVAS----------VSHDRTCKIFDLCTGE-DLLSLIL  225 (343)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~----------~~~d~~i~~wd~~~~~-~~~~~~~  225 (343)
                      .                      .-+.-.=..+.|-.+|  .+|+.          .+.-..+.|+.++... ++.....
T Consensus       389 ~----------------------nlfnVsDckLhWQk~g--dyLcvkvdR~tK~~~~g~f~n~eIfrireKdIpve~vel  444 (698)
T KOG2314|consen  389 K----------------------NLFNVSDCKLHWQKSG--DYLCVKVDRHTKSKVKGQFSNLEIFRIREKDIPVEVVEL  444 (698)
T ss_pred             c----------------------cceeeeccEEEeccCC--cEEEEEEEeeccccccceEeeEEEEEeeccCCCceeeec
Confidence            1                      1121111233444445  45543          2223346667666544 3445557


Q ss_pred             CCcEEEEEEcCCCCEEEEEcC---CCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEE---eC
Q psy10867        226 DTRLTCVAFDGTEDNIYMGTS---EGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSS---SA  299 (343)
Q Consensus       226 ~~~i~~~~~~~~~~~l~~~~~---d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~---~~  299 (343)
                      ...+...+|-|.|+.+++-+.   ..++.+|-+........       .+..+.  ....+.+.|+|.|++++.+   |.
T Consensus       445 ke~vi~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~~~~~~~-------lVk~~d--k~~~N~vfwsPkG~fvvva~l~s~  515 (698)
T KOG2314|consen  445 KESVIAFAWEPHGDKFAVISGNTVKNTVSFYAVETNIKKPS-------LVKELD--KKFANTVFWSPKGRFVVVAALVSR  515 (698)
T ss_pred             chheeeeeeccCCCeEEEEEccccccceeEEEeecCCCchh-------hhhhhc--ccccceEEEcCCCcEEEEEEeccc
Confidence            788999999999998776432   45788888874222111       133332  2456789999999998865   45


Q ss_pred             CCcEEEEecccc--eeeeecccCCceEEEEEccCCCeeeeccc
Q psy10867        300 DETLKIWHTISR--QCLRTIQHKGPVLGAFLGLLPPAIHDYDF  340 (343)
Q Consensus       300 dg~i~iwd~~~~--~~~~~~~~~~~v~~~~~sp~~~~l~~~~~  340 (343)
                      .|.+.++|+.-.  +......| ...+.+.|.|.|+|+.+++-
T Consensus       516 ~g~l~F~D~~~a~~k~~~~~eh-~~at~veWDPtGRYvvT~ss  557 (698)
T KOG2314|consen  516 RGDLEFYDTDYADLKDTASPEH-FAATEVEWDPTGRYVVTSSS  557 (698)
T ss_pred             ccceEEEecchhhhhhccCccc-cccccceECCCCCEEEEeee
Confidence            789999998742  22222223 34688999999999998763

>KOG1354|consensus

Probab=99.63  E-value=1.1e-13  Score=105.71  Aligned_cols=263  Identities=16%  Similarity=0.215  Sum_probs=166.7

Q ss_pred             cCCcceEEEEECCCCCEEEEe-cCCeEEEEEccCCc-----eEEEecccC------------CCeEEEEEecCCC--EEE
Q psy10867         76 ICPGRISSMQASPDAAYIAVS-IETKLHMWQISSGR-----LLATASSHY------------QPITIVKWSADSN--FIV  135 (343)
Q Consensus        76 ~~~~~v~~~~~s~~~~~l~~~-~d~~i~v~~~~~~~-----~~~~~~~~~------------~~v~~~~~~~~~~--~l~  135 (343)
                      ...+-|.++.|...|.+||+| .+|.|.++.-....     ....++.|.            ..|..+.|.++++  .++
T Consensus        23 teadiis~vef~~~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~FL  102 (433)
T KOG1354|consen   23 TEADIISAVEFDHYGERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFL  102 (433)
T ss_pred             chhcceeeEEeecccceEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEEE
Confidence            345678999999999999996 57789888643322     223333343            3578899988554  677


Q ss_pred             EecCCCeEEEeecCccceee-eeecCCCCC------------CCCccccccceeee-ecccccceEEEEeecCCCceEEE
Q psy10867        136 TGGEDGTICVWQLSRLICKQ-TVAFGIPGS------------SGKGVTGLTEPLHV-KSQHSLPVTHVTLSKLGAKSRVA  201 (343)
Q Consensus       136 s~~~dg~i~iwd~~~~~~~~-~~~~~~~~~------------~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~  201 (343)
                      ..+.|.+|++|.+....... .......+.            ..........+.+. -.+|...|+++.++.+.  ..++
T Consensus       103 lstNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~NsD~--Et~l  180 (433)
T KOG1354|consen  103 LSTNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISVNSDK--ETFL  180 (433)
T ss_pred             EecCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeeeecCcc--ceEe
Confidence            78899999999987654332 111110000            00001111112222 23588889999999998  5555


Q ss_pred             EeeCCCeEEEEecCCCceEEEee---------cCCcEEEEEEcCCC-CEEEEEcCCCcEEEEEeecccccc----cc-cc
Q psy10867        202 SVSHDRTCKIFDLCTGEDLLSLI---------LDTRLTCVAFDGTE-DNIYMGTSEGVIKSFCLRQVPRTR----DH-HI  266 (343)
Q Consensus       202 ~~~~d~~i~~wd~~~~~~~~~~~---------~~~~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~----~~-~~  266 (343)
                      ++ .|=.|.+|+++-...-..+-         ...-|++..|+|.. +.++.++..|+|++.|++....-.    .+ ..
T Consensus       181 SA-DdLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~aLCd~hsKlfEep  259 (433)
T KOG1354|consen  181 SA-DDLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQSALCDAHSKLFEEP  259 (433)
T ss_pred             ec-cceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeechhhhhhcchhhhhccc
Confidence            54 67789999987543322221         12358899999965 567778899999999998432110    00 00


Q ss_pred             cCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecc-cceeeeecc-c------------CCce---EEEEEc
Q psy10867        267 QDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTI-SRQCLRTIQ-H------------KGPV---LGAFLG  329 (343)
Q Consensus       267 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~-~------------~~~v---~~~~~s  329 (343)
                      .......-+.+--..|..+.|++.|+++++-..- +|++||+. ..+++.++. |            .+.|   ..++|+
T Consensus       260 edp~~rsffseiIsSISDvKFs~sGryilsRDyl-tvk~wD~nme~~pv~t~~vh~~lr~kLc~lYEnD~IfdKFec~~s  338 (433)
T KOG1354|consen  260 EDPSSRSFFSEIISSISDVKFSHSGRYILSRDYL-TVKLWDLNMEAKPVETYPVHEYLRSKLCSLYENDAIFDKFECSWS  338 (433)
T ss_pred             cCCcchhhHHHHhhhhhceEEccCCcEEEEeccc-eeEEEeccccCCcceEEeehHhHHHHHHHHhhccchhheeEEEEc
Confidence            0111112222333568889999999999987654 89999983 455555544 2            1222   458999


Q ss_pred             cCCCeeeecccCC
Q psy10867        330 LLPPAIHDYDFTP  342 (343)
Q Consensus       330 p~~~~l~~~~~~~  342 (343)
                      -++.++++|+|+.
T Consensus       339 g~~~~v~TGsy~n  351 (433)
T KOG1354|consen  339 GNDSYVMTGSYNN  351 (433)
T ss_pred             CCcceEecccccc
Confidence            9999999999874

>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]

Probab=99.62  E-value=8.9e-12  Score=96.39  Aligned_cols=261  Identities=13%  Similarity=0.128  Sum_probs=170.4

Q ss_pred             CCeEEEEeCCCccc--c-eecccCCcceEEEEECCCCCEEEEe----cCCeEEEEEccC--CceEE--EecccCCCeEEE
Q psy10867         57 KPMIQAWPVNSQEK--A-QLRLICPGRISSMQASPDAAYIAVS----IETKLHMWQISS--GRLLA--TASSHYQPITIV  125 (343)
Q Consensus        57 ~~~i~iw~~~~~~~--~-~~~~~~~~~v~~~~~s~~~~~l~~~----~d~~i~v~~~~~--~~~~~--~~~~~~~~v~~~  125 (343)
                      +.-|.+|++.+..-  . ..+....+..+-|+|+|+++.|.+.    .+|.|..|.++.  |++..  .......+-..+
T Consensus        15 s~gI~v~~ld~~~g~l~~~~~v~~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~yv   94 (346)
T COG2706          15 SQGIYVFNLDTKTGELSLLQLVAELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPPCYV   94 (346)
T ss_pred             CCceEEEEEeCcccccchhhhccccCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCCCeEE
Confidence            36799999874322  1 2233667788999999999888762    367788887764  54422  122223344789


Q ss_pred             EEecCCCEEEEecC-CCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeeccccc----------ceEEEEeecC
Q psy10867        126 KWSADSNFIVTGGE-DGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSL----------PVTHVTLSKL  194 (343)
Q Consensus       126 ~~~~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~v~~~~~~~~  194 (343)
                      ++++++++++++.. .|.|.++-++..-.+...                   .....|.+          .+....+.|+
T Consensus        95 svd~~g~~vf~AnY~~g~v~v~p~~~dG~l~~~-------------------v~~~~h~g~~p~~rQ~~~h~H~a~~tP~  155 (346)
T COG2706          95 SVDEDGRFVFVANYHSGSVSVYPLQADGSLQPV-------------------VQVVKHTGSGPHERQESPHVHSANFTPD  155 (346)
T ss_pred             EECCCCCEEEEEEccCceEEEEEcccCCccccc-------------------eeeeecCCCCCCccccCCccceeeeCCC
Confidence            99999999998874 578999998763222211                   11111222          2778889999


Q ss_pred             CCceEEEEeeC-CCeEEEEecCCCceEEE----eecCCcEEEEEEcCCCCEEEEEcC-CCcEEEEEeeccc-cccccccc
Q psy10867        195 GAKSRVASVSH-DRTCKIFDLCTGEDLLS----LILDTRLTCVAFDGTEDNIYMGTS-EGVIKSFCLRQVP-RTRDHHIQ  267 (343)
Q Consensus       195 ~~~~~l~~~~~-d~~i~~wd~~~~~~~~~----~~~~~~i~~~~~~~~~~~l~~~~~-d~~i~i~d~~~~~-~~~~~~~~  267 (343)
                      +  ++|++..- -..|.+|++..++....    ++.....+.|.|+|++++.++.++ +++|.+|...... ...+... 
T Consensus       156 ~--~~l~v~DLG~Dri~~y~~~dg~L~~~~~~~v~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~-  232 (346)
T COG2706         156 G--RYLVVPDLGTDRIFLYDLDDGKLTPADPAEVKPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEELQT-  232 (346)
T ss_pred             C--CEEEEeecCCceEEEEEcccCccccccccccCCCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcCCCceEEEeee-
Confidence            9  66666543 45799999997765332    234667899999999999888665 9999999988741 1111100 


Q ss_pred             CCCCCCccccccCcEEEEEEccCCCEEEEEeC-CCcEEEEecccc-eeeeecc----cCCceEEEEEccCCCeeeeccc
Q psy10867        268 DSTSNPDFIGHEKQVTSLSCSITGITLLSSSA-DETLKIWHTISR-QCLRTIQ----HKGPVLGAFLGLLPPAIHDYDF  340 (343)
Q Consensus       268 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~-dg~i~iwd~~~~-~~~~~~~----~~~~v~~~~~sp~~~~l~~~~~  340 (343)
                      -...-..+. ...+...+.++|||++|.++.. ...|.+|.+... ..+..+.    +....+.+.|+|.+++|+++.-
T Consensus       233 i~tlP~dF~-g~~~~aaIhis~dGrFLYasNRg~dsI~~f~V~~~~g~L~~~~~~~teg~~PR~F~i~~~g~~Liaa~q  310 (346)
T COG2706         233 IDTLPEDFT-GTNWAAAIHISPDGRFLYASNRGHDSIAVFSVDPDGGKLELVGITPTEGQFPRDFNINPSGRFLIAANQ  310 (346)
T ss_pred             eccCccccC-CCCceeEEEECCCCCEEEEecCCCCeEEEEEEcCCCCEEEEEEEeccCCcCCccceeCCCCCEEEEEcc
Confidence            000011122 2455778899999999987743 347888877532 2233332    3444789999999999998764

>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]

Probab=99.62  E-value=2.2e-12  Score=102.99  Aligned_cols=217  Identities=7%  Similarity=-0.025  Sum_probs=162.7

Q ss_pred             EECCCCCEEEEecCCeEEEEEccCCceEEEecc---c--------CCCeEEEE-Eec-CCCEEEEecCCCeEEEeecCcc
Q psy10867         85 QASPDAAYIAVSIETKLHMWQISSGRLLATASS---H--------YQPITIVK-WSA-DSNFIVTGGEDGTICVWQLSRL  151 (343)
Q Consensus        85 ~~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~~---~--------~~~v~~~~-~~~-~~~~l~s~~~dg~i~iwd~~~~  151 (343)
                      ..+.||+.++-+..|.|++||..+.+....--+   .        ..+..-+. |++ +|++++..+. |+..+.+...+
T Consensus       273 ~~nsDGkrIvFq~~GdIylydP~td~lekldI~lpl~rk~k~~k~~~pskyledfa~~~Gd~ia~VSR-GkaFi~~~~~~  351 (668)
T COG4946         273 NANSDGKRIVFQNAGDIYLYDPETDSLEKLDIGLPLDRKKKQPKFVNPSKYLEDFAVVNGDYIALVSR-GKAFIMRPWDG  351 (668)
T ss_pred             ccCCCCcEEEEecCCcEEEeCCCcCcceeeecCCccccccccccccCHHHhhhhhccCCCcEEEEEec-CcEEEECCCCC
Confidence            346799999999999999999887654321101   0        01111122 443 7888888887 77888777654


Q ss_pred             ceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCC-eEEEEecCCCceEEEeecCCcEE
Q psy10867        152 ICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDR-TCKIFDLCTGEDLLSLILDTRLT  230 (343)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~-~i~~wd~~~~~~~~~~~~~~~i~  230 (343)
                      -.+                        .-++...|.-..+..++  +-++.|..|| .+-++|.++++.......-+.|.
T Consensus       352 ~~i------------------------qv~~~~~VrY~r~~~~~--e~~vigt~dgD~l~iyd~~~~e~kr~e~~lg~I~  405 (668)
T COG4946         352 YSI------------------------QVGKKGGVRYRRIQVDP--EGDVIGTNDGDKLGIYDKDGGEVKRIEKDLGNIE  405 (668)
T ss_pred             eeE------------------------EcCCCCceEEEEEccCC--cceEEeccCCceEEEEecCCceEEEeeCCccceE
Confidence            222                        23577778888887777  5688888888 89999999888766666778899


Q ss_pred             EEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCC----cEEEE
Q psy10867        231 CVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADE----TLKIW  306 (343)
Q Consensus       231 ~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg----~i~iw  306 (343)
                      ++..+|+|++++++.....+.+.|+.+.....           .-+...+-|+...|||+++++|-+--+|    .|+++
T Consensus       406 av~vs~dGK~~vvaNdr~el~vididngnv~~-----------idkS~~~lItdf~~~~nsr~iAYafP~gy~tq~Ikly  474 (668)
T COG4946         406 AVKVSPDGKKVVVANDRFELWVIDIDNGNVRL-----------IDKSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLY  474 (668)
T ss_pred             EEEEcCCCcEEEEEcCceEEEEEEecCCCeeE-----------ecccccceeEEEEEcCCceeEEEecCcceeeeeEEEE
Confidence            99999999999999999999999998864321           1223456799999999999999776554    68999


Q ss_pred             ecccceeeeecccCCceEEEEEccCCCeeeecc
Q psy10867        307 HTISRQCLRTIQHKGPVLGAFLGLLPPAIHDYD  339 (343)
Q Consensus       307 d~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~  339 (343)
                      |+..++........+.=.+-+|.||+++|.--+
T Consensus       475 dm~~~Kiy~vTT~ta~DfsPaFD~d~ryLYfLs  507 (668)
T COG4946         475 DMDGGKIYDVTTPTAYDFSPAFDPDGRYLYFLS  507 (668)
T ss_pred             ecCCCeEEEecCCcccccCcccCCCCcEEEEEe
Confidence            999988877766666667889999999987543

>KOG0974|consensus

Probab=99.60  E-value=1.2e-13  Score=119.74  Aligned_cols=253  Identities=18%  Similarity=0.197  Sum_probs=174.2

Q ss_pred             CeEEEEecCCceEEEEEecCCCCcce---EEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCC
Q psy10867         15 GAISVWEPKGGTLLMSYKGASVLSPH---SMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAA   91 (343)
Q Consensus        15 g~i~iwd~~~~~~~~~~~~~~~~~v~---~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~   91 (343)
                      -.|.+||+.++..+..+.......+.   ...-.-.+.+++++.. +.+..=+... +   ......+.|....+..+.+
T Consensus        26 p~i~~yd~~s~~li~~~~~~~~~~~H~~e~~~~l~~~~~v~~~~~-~~v~~~~~~~-~---~~~~~s~wi~g~~l~~e~k  100 (967)
T KOG0974|consen   26 PEILVYDLSSGCLIRHLIQSKILEVHRGEGKVKLLSGKIVTCAKS-DEVYVKEASN-Q---IIERFSDWIFGAKLFEENK  100 (967)
T ss_pred             CceEEeeCCchhHhhhhhhhcccccccccccceeccceEEEEEee-cceeecchhh-h---hhhhccccccccchhhhcc
Confidence            46889999888776655443321222   0000012344444433 2232221111 1   1111223334444555555


Q ss_pred             EEEE-ecCCeEEEEEccCCceEEEecccCC----CeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCC
Q psy10867         92 YIAV-SIETKLHMWQISSGRLLATASSHYQ----PITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSG  166 (343)
Q Consensus        92 ~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~----~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~  166 (343)
                      .++. +.++.+.+||...+...........    ...-+.++++.-++++|+.-+.|.+|+.....              
T Consensus       101 ~i~l~~~~ns~~i~d~~~~~~~~~i~~~er~~l~~~~~~g~s~~~~~i~~gsv~~~iivW~~~~dn--------------  166 (967)
T KOG0974|consen  101 KIALVTSRNSLLIRDSKNSSVLSKIQSDERCTLYSSLIIGDSAEELYIASGSVFGEIIVWKPHEDN--------------  166 (967)
T ss_pred             eEEEEEcCceEEEEecccCceehhcCCCceEEEEeEEEEeccCcEEEEEeccccccEEEEeccccC--------------
Confidence            6664 7899999999988777666543221    11123345666789999999999999998321              


Q ss_pred             CccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEE--EeecCCcEEEEEEcCCCCEEEEE
Q psy10867        167 KGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLL--SLILDTRLTCVAFDGTEDNIYMG  244 (343)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~--~~~~~~~i~~~~~~~~~~~l~~~  244 (343)
                              .-..+.+|.+.|.++.++.+|  .++++.|+|.++|+|++++.+...  -+.|..++..++|.|+  +++++
T Consensus       167 --------~p~~l~GHeG~iF~i~~s~dg--~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw~~~~~~n--~i~t~  234 (967)
T KOG0974|consen  167 --------KPIRLKGHEGSIFSIVTSLDG--RYIASVSDDRSIRLWPIDSREVLGCTGFGHSARVWACCFLPN--RIITV  234 (967)
T ss_pred             --------CcceecccCCceEEEEEccCC--cEEEEEecCcceeeeecccccccCcccccccceeEEEEeccc--eeEEe
Confidence                    222678999999999999999  899999999999999999988765  4568999999999998  99999


Q ss_pred             cCCCcEEEEEeecccccccccccCCCCCCcccccc-CcEEEEEEccCCCEEEEEeCCCcEEEEeccc
Q psy10867        245 TSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHE-KQVTSLSCSITGITLLSSSADETLKIWHTIS  310 (343)
Q Consensus       245 ~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~  310 (343)
                      +.|-+.++|+.....            +..+.+|. ..+..++.+++...+++++.|+.+++|++..
T Consensus       235 gedctcrvW~~~~~~------------l~~y~~h~g~~iw~~~~~~~~~~~vT~g~Ds~lk~~~l~~  289 (967)
T KOG0974|consen  235 GEDCTCRVWGVNGTQ------------LEVYDEHSGKGIWKIAVPIGVIIKVTGGNDSTLKLWDLNG  289 (967)
T ss_pred             ccceEEEEEecccce------------ehhhhhhhhcceeEEEEcCCceEEEeeccCcchhhhhhhc
Confidence            999999999655422            33566665 4589999999988999999999999999754

>KOG1354|consensus

Probab=99.59  E-value=1.2e-13  Score=105.54  Aligned_cols=247  Identities=11%  Similarity=0.090  Sum_probs=168.6

Q ss_pred             cceEEEEeCCceEEEEEcCCCeEEEEeCCCccc-----ceecccC------------CcceEEEEECCCCC---EEEEec
Q psy10867         38 SPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEK-----AQLRLIC------------PGRISSMQASPDAA---YIAVSI   97 (343)
Q Consensus        38 ~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~-----~~~~~~~------------~~~v~~~~~s~~~~---~l~~~~   97 (343)
                      -+.++.|...|.+|++|..+|.|.++.-+....     ...+..|            ...|..++|.++++   +|+++.
T Consensus        27 iis~vef~~~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~FLlstN  106 (433)
T KOG1354|consen   27 IISAVEFDHYGERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFLLSTN  106 (433)
T ss_pred             ceeeEEeecccceEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEEEEecC
Confidence            788999999999999999999999996443221     1222222            34688999998763   677789


Q ss_pred             CCeEEEEEccCCce-----------------------------------EEEe-cccCCCeEEEEEecCCCEEEEecCCC
Q psy10867         98 ETKLHMWQISSGRL-----------------------------------LATA-SSHYQPITIVKWSADSNFIVTGGEDG  141 (343)
Q Consensus        98 d~~i~v~~~~~~~~-----------------------------------~~~~-~~~~~~v~~~~~~~~~~~l~s~~~dg  141 (343)
                      |.+|++|.+.....                                   .+.+ .+|.--|.++.++.|...++++ .|=
T Consensus       107 dktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~NsD~Et~lSA-DdL  185 (433)
T KOG1354|consen  107 DKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISVNSDKETFLSA-DDL  185 (433)
T ss_pred             CcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeeeecCccceEeec-cce
Confidence            99999998753211                                   0011 2577778999999998888775 467


Q ss_pred             eEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceE-
Q psy10867        142 TICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDL-  220 (343)
Q Consensus       142 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~-  220 (343)
                      .|.+|++.-......+.              .-....+..-..-|++..|+|... +.++-.+..|+|++.|++....- 
T Consensus       186 RINLWnlei~d~sFnIV--------------DIKP~nmEeLteVITsaEFhp~~c-n~f~YSSSKGtIrLcDmR~~aLCd  250 (433)
T KOG1354|consen  186 RINLWNLEIIDQSFNIV--------------DIKPANMEELTEVITSAEFHPHHC-NVFVYSSSKGTIRLCDMRQSALCD  250 (433)
T ss_pred             eeeeccccccCCceeEE--------------EccccCHHHHHHHHhhhccCHhHc-cEEEEecCCCcEEEeechhhhhhc
Confidence            89999987543222111              000011122345688999999876 78888888999999999843221 


Q ss_pred             ---EEee-------------cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCcccccc-----
Q psy10867        221 ---LSLI-------------LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHE-----  279 (343)
Q Consensus       221 ---~~~~-------------~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~-----  279 (343)
                         ..+.             .-..|..+.|+++|+++++-. =-+|++||+.....+          +..++-|.     
T Consensus       251 ~hsKlfEepedp~~rsffseiIsSISDvKFs~sGryilsRD-yltvk~wD~nme~~p----------v~t~~vh~~lr~k  319 (433)
T KOG1354|consen  251 AHSKLFEEPEDPSSRSFFSEIISSISDVKFSHSGRYILSRD-YLTVKLWDLNMEAKP----------VETYPVHEYLRSK  319 (433)
T ss_pred             chhhhhccccCCcchhhHHHHhhhhhceEEccCCcEEEEec-cceeEEEeccccCCc----------ceEEeehHhHHHH
Confidence               1111             123588899999999999753 257999999654333          22222222     


Q ss_pred             -------Cc---EEEEEEccCCCEEEEEeCCCcEEEEecccc
Q psy10867        280 -------KQ---VTSLSCSITGITLLSSSADETLKIWHTISR  311 (343)
Q Consensus       280 -------~~---v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~  311 (343)
                             ..   -..++|+-++.++++|+....+++++...|
T Consensus       320 Lc~lYEnD~IfdKFec~~sg~~~~v~TGsy~n~frvf~~~~g  361 (433)
T KOG1354|consen  320 LCSLYENDAIFDKFECSWSGNDSYVMTGSYNNVFRVFNLARG  361 (433)
T ss_pred             HHHHhhccchhheeEEEEcCCcceEecccccceEEEecCCCC
Confidence                   12   245789999999999999999999996544

>KOG0280|consensus

Probab=99.58  E-value=1.6e-12  Score=97.45  Aligned_cols=251  Identities=10%  Similarity=0.053  Sum_probs=171.1

Q ss_pred             CeEEEEeCCCcccce---ecccCCcceEEEEECC---CCCEE-E-EecCCeEEEEEccCCceEEEecccC------CCeE
Q psy10867         58 PMIQAWPVNSQEKAQ---LRLICPGRISSMQASP---DAAYI-A-VSIETKLHMWQISSGRLLATASSHY------QPIT  123 (343)
Q Consensus        58 ~~i~iw~~~~~~~~~---~~~~~~~~v~~~~~s~---~~~~l-~-~~~d~~i~v~~~~~~~~~~~~~~~~------~~v~  123 (343)
                      |.+.+|++...+...   ........+..+.|..   +|.+. + +-..|.|.+|..........+++-.      ....
T Consensus        46 Gkl~Lys~~d~~~~~l~~~q~~dts~~~dm~w~~~~~~g~~~l~~a~a~G~i~~~r~~~~~ss~~L~~ls~~ki~~~~~l  125 (339)
T KOG0280|consen   46 GKLHLYSLEDMKLSPLDTLQCTDTSTEFDMLWRIRETDGDFNLLDAHARGQIQLYRNDEDESSVHLRGLSSKKISVVEAL  125 (339)
T ss_pred             cceEEEeecccccCccceeeeecccccceeeeeeccCCccceeeeccccceEEEEeeccceeeeeecccchhhhhheeee
Confidence            678899888766543   1123345567777753   44422 2 3568899999876555444444321      1245


Q ss_pred             EEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEe
Q psy10867        124 IVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASV  203 (343)
Q Consensus       124 ~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~  203 (343)
                      ++.|++.+..++++..+|.+.+-+......                    +..+..+.|..++....|+...+ +++.+|
T Consensus       126 slD~~~~~~~i~vs~s~G~~~~v~~t~~~l--------------------e~vq~wk~He~E~Wta~f~~~~p-nlvytG  184 (339)
T KOG0280|consen  126 SLDISTSGTKIFVSDSRGSISGVYETEMVL--------------------EKVQTWKVHEFEAWTAKFSDKEP-NLVYTG  184 (339)
T ss_pred             EEEeeccCceEEEEcCCCcEEEEecceeee--------------------eecccccccceeeeeeecccCCC-ceEEec
Confidence            788899899999999999998555544321                    24456788999999999998776 899999


Q ss_pred             eCCCeEEEEecCC-CceEEE--eecCCcEEEEEEcC-CCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCcccccc
Q psy10867        204 SHDRTCKIFDLCT-GEDLLS--LILDTRLTCVAFDG-TEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHE  279 (343)
Q Consensus       204 ~~d~~i~~wd~~~-~~~~~~--~~~~~~i~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~  279 (343)
                      +.|+.+..||++. ++.+..  ..|...|.++.-+| .+.++++|+.|..|++||.++..++..          .- .-.
T Consensus       185 gDD~~l~~~D~R~p~~~i~~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRnm~kPl~----------~~-~v~  253 (339)
T KOG0280|consen  185 GDDGSLSCWDIRIPKTFIWHNSKVHTSGVVSIYSSPPKPTYIATGSYDECIRVLDTRNMGKPLF----------KA-KVG  253 (339)
T ss_pred             CCCceEEEEEecCCcceeeecceeeecceEEEecCCCCCceEEEeccccceeeeehhcccCccc----------cC-ccc
Confidence            9999999999993 333333  23778899998887 467999999999999999998655432          11 123


Q ss_pred             CcEEEEEEccCC--CEEEEEeCCCcEEEEeccccee-----eeecc-cCCceEEEEEccCCCeeeecccC
Q psy10867        280 KQVTSLSCSITG--ITLLSSSADETLKIWHTISRQC-----LRTIQ-HKGPVLGAFLGLLPPAIHDYDFT  341 (343)
Q Consensus       280 ~~v~~~~~s~~~--~~l~s~~~dg~i~iwd~~~~~~-----~~~~~-~~~~v~~~~~sp~~~~l~~~~~~  341 (343)
                      +.|+.+.++|.-  +.|+++-.+ -.+|-+...+..     +...+ |.+-...-.|......|++++|.
T Consensus       254 GGVWRi~~~p~~~~~lL~~CMh~-G~ki~~~~~~~~e~~~~~~s~~~hdSl~YG~DWd~~~~~lATCsFY  322 (339)
T KOG0280|consen  254 GGVWRIKHHPEIFHRLLAACMHN-GAKILDSSDKVLEFQIVLPSDKIHDSLCYGGDWDSKDSFLATCSFY  322 (339)
T ss_pred             cceEEEEecchhhhHHHHHHHhc-CceEEEecccccchheeeeccccccceeeccccccccceeeeeecc
Confidence            789999999953  344455444 467777665422     22233 66667777776555667776664

>KOG0974|consensus

Probab=99.57  E-value=1.4e-13  Score=119.28  Aligned_cols=182  Identities=20%  Similarity=0.223  Sum_probs=144.8

Q ss_pred             EEecCCCCeEEEEecCCceEEEEEecCCCCcc---eEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEE
Q psy10867          8 AFSYDGSGAISVWEPKGGTLLMSYKGASVLSP---HSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSM   84 (343)
Q Consensus         8 ~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v---~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~   84 (343)
                      ++....++.+.+||...+.....+...+....   .-+.++++..++++|+--+.|.+|+....+....+.+|.+.|..+
T Consensus       102 i~l~~~~ns~~i~d~~~~~~~~~i~~~er~~l~~~~~~g~s~~~~~i~~gsv~~~iivW~~~~dn~p~~l~GHeG~iF~i  181 (967)
T KOG0974|consen  102 IALVTSRNSLLIRDSKNSSVLSKIQSDERCTLYSSLIIGDSAEELYIASGSVFGEIIVWKPHEDNKPIRLKGHEGSIFSI  181 (967)
T ss_pred             EEEEEcCceEEEEecccCceehhcCCCceEEEEeEEEEeccCcEEEEEeccccccEEEEeccccCCcceecccCCceEEE
Confidence            34445567889999887777777666553122   223345677888888888999999988444334477999999999


Q ss_pred             EECCCCCEEEE-ecCCeEEEEEccCCceEE-EecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCC
Q psy10867         85 QASPDAAYIAV-SIETKLHMWQISSGRLLA-TASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIP  162 (343)
Q Consensus        85 ~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~  162 (343)
                      .|+.||+++++ +.|.++++|++++.+... ..-+|+..|..++|.|+  .+++++.|.+.++|+.+..           
T Consensus       182 ~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw~~~~~~n--~i~t~gedctcrvW~~~~~-----------  248 (967)
T KOG0974|consen  182 VTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFGHSARVWACCFLPN--RIITVGEDCTCRVWGVNGT-----------  248 (967)
T ss_pred             EEccCCcEEEEEecCcceeeeecccccccCcccccccceeEEEEeccc--eeEEeccceEEEEEecccc-----------
Confidence            99999999997 889999999999988766 66689999999999988  8999999999999977653           


Q ss_pred             CCCCCccccccceeeeecccc-cceEEEEeecCCCceEEEEeeCCCeEEEEecCC
Q psy10867        163 GSSGKGVTGLTEPLHVKSQHS-LPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCT  216 (343)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~  216 (343)
                                  .+..+.+|. ..|..++..++.  ..+++++.|+.+++||+..
T Consensus       249 ------------~l~~y~~h~g~~iw~~~~~~~~--~~~vT~g~Ds~lk~~~l~~  289 (967)
T KOG0974|consen  249 ------------QLEVYDEHSGKGIWKIAVPIGV--IIKVTGGNDSTLKLWDLNG  289 (967)
T ss_pred             ------------eehhhhhhhhcceeEEEEcCCc--eEEEeeccCcchhhhhhhc
Confidence                        334555664 458889998887  8999999999999999753

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=99.56  E-value=2.3e-11  Score=112.71  Aligned_cols=262  Identities=10%  Similarity=0.023  Sum_probs=164.6

Q ss_pred             eEEEEeC-CceEEEEEcCCCeEEEEeCCCcccceecc-c------------CCcceEEEEECCCCCEEEE--ecCCeEEE
Q psy10867         40 HSMCLLG-NDYVLGVEKGKPMIQAWPVNSQEKAQLRL-I------------CPGRISSMQASPDAAYIAV--SIETKLHM  103 (343)
Q Consensus        40 ~~~~~~~-~~~~~~~~~~~~~i~iw~~~~~~~~~~~~-~------------~~~~v~~~~~s~~~~~l~~--~~d~~i~v  103 (343)
                      ..+++++ ++.++++-..++.|+++|.........-. +            .-.....+++.+++..|..  ..++.|++
T Consensus       571 ~gvavd~~~g~lyVaDs~n~rI~v~d~~G~~i~~ig~~g~~G~~dG~~~~a~f~~P~GIavd~~gn~LYVaDt~n~~Ir~  650 (1057)
T PLN02919        571 GKLAIDLLNNRLFISDSNHNRIVVTDLDGNFIVQIGSTGEEGLRDGSFEDATFNRPQGLAYNAKKNLLYVADTENHALRE  650 (1057)
T ss_pred             ceEEEECCCCeEEEEECCCCeEEEEeCCCCEEEEEccCCCcCCCCCchhccccCCCcEEEEeCCCCEEEEEeCCCceEEE
Confidence            4688886 46777777777899999986543222111 1            1123578899988875544  35678999


Q ss_pred             EEccCCceEEEeccc-----------------CCCeEEEEEec-CCCEEEEecCCCeEEEeecCccceeeeeecCCCCCC
Q psy10867        104 WQISSGRLLATASSH-----------------YQPITIVKWSA-DSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSS  165 (343)
Q Consensus       104 ~~~~~~~~~~~~~~~-----------------~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~  165 (343)
                      +|+.++. +.++.+-                 -..-..++++| ++..+++.+.++.|++||..++.... +..  .+..
T Consensus       651 id~~~~~-V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~v~~-~~G--~G~~  726 (1057)
T PLN02919        651 IDFVNET-VRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAGQHQIWEYNISDGVTRV-FSG--DGYE  726 (1057)
T ss_pred             EecCCCE-EEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECCCCeEEEEECCCCeEEE-Eec--CCcc
Confidence            9987764 3333110                 11246899999 56667777788999999987764321 110  0000


Q ss_pred             CCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee--------------c------
Q psy10867        166 GKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI--------------L------  225 (343)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~--------------~------  225 (343)
                      .. ...   .. .....-.....++++|++. .++++-+.++.|++||+.++.......              .      
T Consensus       727 ~~-~~g---~~-~~~~~~~~P~GIavspdG~-~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~  800 (1057)
T PLN02919        727 RN-LNG---SS-GTSTSFAQPSGISLSPDLK-ELYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSE  800 (1057)
T ss_pred             cc-CCC---Cc-cccccccCccEEEEeCCCC-EEEEEECCCCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhh
Confidence            00 000   00 0011123467899999983 366677778999999998765321110              0      


Q ss_pred             --CCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCC----CCccccccCcEEEEEEccCCCEEEEEeC
Q psy10867        226 --DTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTS----NPDFIGHEKQVTSLSCSITGITLLSSSA  299 (343)
Q Consensus       226 --~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~----~~~~~~~~~~v~~~~~s~~~~~l~s~~~  299 (343)
                        -.....++++++|+.+++-..++.|++||..+........  .+..    -....+.-.....++++++|+++++-+.
T Consensus       801 ~~l~~P~Gvavd~dG~LYVADs~N~rIrviD~~tg~v~tiaG--~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt~  878 (1057)
T PLN02919        801 VLLQHPLGVLCAKDGQIYVADSYNHKIKKLDPATKRVTTLAG--TGKAGFKDGKALKAQLSEPAGLALGENGRLFVADTN  878 (1057)
T ss_pred             hhccCCceeeEeCCCcEEEEECCCCEEEEEECCCCeEEEEec--cCCcCCCCCcccccccCCceEEEEeCCCCEEEEECC
Confidence              0124688999999988888889999999987643221110  0000    0011223346788999999999999999


Q ss_pred             CCcEEEEeccccee
Q psy10867        300 DETLKIWHTISRQC  313 (343)
Q Consensus       300 dg~i~iwd~~~~~~  313 (343)
                      ++.|++||+.+++.
T Consensus       879 Nn~Irvid~~~~~~  892 (1057)
T PLN02919        879 NSLIRYLDLNKGEA  892 (1057)
T ss_pred             CCEEEEEECCCCcc
Confidence            99999999988764

>KOG4547|consensus

Probab=99.54  E-value=9.1e-12  Score=101.96  Aligned_cols=188  Identities=14%  Similarity=0.217  Sum_probs=145.2

Q ss_pred             CCceEEEEEcCCCeEEEEeCCCcccceeccc---CCcceEEEEE------CC--------------CCCEEEEe-cCCeE
Q psy10867         46 GNDYVLGVEKGKPMIQAWPVNSQEKAQLRLI---CPGRISSMQA------SP--------------DAAYIAVS-IETKL  101 (343)
Q Consensus        46 ~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~---~~~~v~~~~~------s~--------------~~~~l~~~-~d~~i  101 (343)
                      |...++|....||.+++|+...++..+.+.+   -.+...+..|      +|              |-..++-| ..|.|
T Consensus         3 ~~~~~~A~~~~~g~l~iw~t~~~~~~~e~~p~~~~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlgt~~g~v   82 (541)
T KOG4547|consen    3 PALDYFALSTGDGRLRIWDTAKNQLQQEFAPIASLSGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLGTPQGSV   82 (541)
T ss_pred             chhheEeecCCCCeEEEEEccCceeeeeeccchhccCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEeecCCccE
Confidence            4457888888889999999998876544331   1233333333      22              11234434 57899


Q ss_pred             EEEEccCCceEEEec--ccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeee
Q psy10867        102 HMWQISSGRLLATAS--SHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVK  179 (343)
Q Consensus       102 ~v~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (343)
                      .+|++..|+....+.  .|.+.|.++.++.+...|.+++.|+.+..|+.....                      ..+..
T Consensus        83 ~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~----------------------~~~~~  140 (541)
T KOG4547|consen   83 LLYSVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKV----------------------IIRIW  140 (541)
T ss_pred             EEEEecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccce----------------------eeeee
Confidence            999999999887776  689999999999999999999999999999998864                      44455


Q ss_pred             cccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCC-----CCEEEEE-cCCCcEEE
Q psy10867        180 SQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGT-----EDNIYMG-TSEGVIKS  252 (343)
Q Consensus       180 ~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~-----~~~l~~~-~~d~~i~i  252 (343)
                      ......+.+++++|++  ..+++++  ++|++||+++++.+.+|. |.++|.++.|..+     |.+++++ ..+..+.+
T Consensus       141 ~~~~~~~~sl~is~D~--~~l~~as--~~ik~~~~~~kevv~~ftgh~s~v~t~~f~~~~~g~~G~~vLssa~~~r~i~~  216 (541)
T KOG4547|consen  141 KEQKPLVSSLCISPDG--KILLTAS--RQIKVLDIETKEVVITFTGHGSPVRTLSFTTLIDGIIGKYVLSSAAAERGITV  216 (541)
T ss_pred             ccCCCccceEEEcCCC--CEEEecc--ceEEEEEccCceEEEEecCCCcceEEEEEEEeccccccceeeeccccccceeE
Confidence            5677788999999998  7888876  789999999999999998 7889999999877     6666664 45667788


Q ss_pred             EEeeccc
Q psy10867        253 FCLRQVP  259 (343)
Q Consensus       253 ~d~~~~~  259 (343)
                      |-.....
T Consensus       217 w~v~~~~  223 (541)
T KOG4547|consen  217 WVVEKED  223 (541)
T ss_pred             EEEEccc
Confidence            8776643

>KOG1912|consensus

Probab=99.53  E-value=3.2e-11  Score=102.08  Aligned_cols=321  Identities=12%  Similarity=0.057  Sum_probs=209.0

Q ss_pred             CCeEEEEecCCceEEEEEecCCCCcceEEEEeCC------------ceEEEEEcCCCeEEEEeCCCcccceecccCCcce
Q psy10867         14 SGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGN------------DYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRI   81 (343)
Q Consensus        14 dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~------------~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v   81 (343)
                      ...|.+-|..+.+.++.++.|.. .|+.+.|.|-            ..++|+++-.|.|.+||...+..+..+..+.+++
T Consensus        34 hslV~VVDs~s~q~iqsie~h~s-~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil~d~~~~s~~~~l~~~~~~~  112 (1062)
T KOG1912|consen   34 HSLVSVVDSRSLQLIQSIELHQS-AVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIILVDFVLASVINWLSHSNDSV  112 (1062)
T ss_pred             CceEEEEehhhhhhhhccccCcc-ceeEEEeccCCCchhccCccccceeEEeccccCcEEEEEehhhhhhhhhcCCCcch
Confidence            35688899999999999999998 9999999862            2577888888999999999988887788889999


Q ss_pred             EEEEECC---CC-CEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEec-CCCEEEEecCCCeEEEeecCccce--
Q psy10867         82 SSMQASP---DA-AYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSA-DSNFIVTGGEDGTICVWQLSRLIC--  153 (343)
Q Consensus        82 ~~~~~s~---~~-~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~--  153 (343)
                      ..+.|-+   +. .+|++ .....+.+|+..+|+.............|+.+.| |.+.+..-+..|.+.+-+.-....  
T Consensus       113 qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~k~Wk~~ys~~iLs~f~~DPfd~rh~~~l~s~g~vl~~~~l~~sep~  192 (1062)
T KOG1912|consen  113 QDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGEKFWKYDYSHEILSCFRVDPFDSRHFCVLGSKGFVLSCKDLGLSEPD  192 (1062)
T ss_pred             hheeeeeccCcchheeEEecCCcEEEEEEccCCceeeccccCCcceeeeeeCCCCcceEEEEccCceEEEEeccCCCCCC
Confidence            9999976   33 34444 6778999999999999888876667788899999 667676666678777766532211  


Q ss_pred             --eeeeecCCCCCCCC---ccccccceeeeeccccc---ceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeec
Q psy10867        154 --KQTVAFGIPGSSGK---GVTGLTEPLHVKSQHSL---PVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLIL  225 (343)
Q Consensus       154 --~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~  225 (343)
                        .+.+....+.....   .................   ....++|+|.-  +.++.......+.++|++-..++.....
T Consensus       193 ~pgk~~qI~sd~Sdl~~lere~at~ns~ts~~~sa~fity~a~faf~p~~--rn~lfi~~prellv~dle~~~~l~vvpi  270 (1062)
T KOG1912|consen  193 VPGKEFQITSDHSDLAHLERETATGNSTTSTPASAYFITYCAQFAFSPHW--RNILFITFPRELLVFDLEYECCLAVVPI  270 (1062)
T ss_pred             CCceeEEEecCccchhhhhhhhhccccccCCCcchhHHHHHHhhhcChhh--hceEEEEeccceEEEcchhhceeEEEEe
Confidence              11111111100000   00000000000000000   02235677876  3444555678899999998888887774


Q ss_pred             C-CcEEEEEEcC--CCCEEEEEcCCCcEEEEEeeccccccccc-------------------------------------
Q psy10867        226 D-TRLTCVAFDG--TEDNIYMGTSEGVIKSFCLRQVPRTRDHH-------------------------------------  265 (343)
Q Consensus       226 ~-~~i~~~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-------------------------------------  265 (343)
                      + +.+.-+.+-|  +...|++...||.+.+|-.+.........                                     
T Consensus       271 er~~akfv~vlP~~~rd~LfclH~nG~ltirvrk~~~~~f~~~~~~l~~dl~~Q~~~vr~m~~~rp~~~~~cPs~~sa~a  350 (1062)
T KOG1912|consen  271 ERGGAKFVDVLPDPRRDALFCLHSNGRLTIRVRKEEPTEFKKPNASLSMDLGEQVHVVRPMEEFRPVIGASCPSTPSALA  350 (1062)
T ss_pred             ccCCcceeEeccCCCcceEEEEecCCeEEEEEeeccCccccccchhhccccccceEEEeechhcccceeecCCCChhhhh
Confidence            3 3344455555  45689999999999999766522111100                                     


Q ss_pred             ------------ccCCC-------------------------------CCCccccccCcEEEEEEcc-----------CC
Q psy10867        266 ------------IQDST-------------------------------SNPDFIGHEKQVTSLSCSI-----------TG  291 (343)
Q Consensus       266 ------------~~~~~-------------------------------~~~~~~~~~~~v~~~~~s~-----------~~  291 (343)
                                  +.+++                               .+....+|....++....|           .+
T Consensus       351 vl~s~g~~~~w~l~~~ri~~~~~s~~iel~~pf~f~~~~~~v~k~~l~~LS~dg~h~sGs~~~~~~p~p~~t~~~~~p~~  430 (1062)
T KOG1912|consen  351 VLYSSGDSTFWQLSNGRIHLDYRSSSIELVLPFDFNLSTKLVGKTSLISLSDDGSHSSGSTCVRMRPMPELTKVENDPGG  430 (1062)
T ss_pred             hhhhcchhHHHhhhcCCcCcccccccccccccccccCceeehhhccccchhhcCCCCCCceeeecccCcccceeecCCCC
Confidence                        00000                               0001113444444433322           22


Q ss_pred             -------CEEEEEeCCCcEEEEecccceeeeecc-cCCceEEEEEccCCCeeee
Q psy10867        292 -------ITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVLGAFLGLLPPAIHD  337 (343)
Q Consensus       292 -------~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~  337 (343)
                             .++|.|.+.|+|.++|+.++..-..+. |.+.|.++.|-.+..++-.
T Consensus       431 n~~~~~~pLvAvGT~sGTV~vvdvst~~v~~~fsvht~~VkgleW~g~sslvSf  484 (1062)
T KOG1912|consen  431 NTPAGTVPLVAVGTNSGTVDVVDVSTNAVAASFSVHTSLVKGLEWLGNSSLVSF  484 (1062)
T ss_pred             CccceeeeeEEeecCCceEEEEEecchhhhhhhcccccceeeeeeccceeEEEe
Confidence                   267899999999999999999999998 9999999999877655543

>KOG4547|consensus

Probab=99.53  E-value=6.7e-12  Score=102.71  Aligned_cols=186  Identities=12%  Similarity=0.143  Sum_probs=146.2

Q ss_pred             eEEEecCCCCeEEEEecCCceEEEEEecCCCC--cceEEEEe------C--------------CceEEEEEcCCCeEEEE
Q psy10867          6 EVAFSYDGSGAISVWEPKGGTLLMSYKGASVL--SPHSMCLL------G--------------NDYVLGVEKGKPMIQAW   63 (343)
Q Consensus         6 ~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~--~v~~~~~~------~--------------~~~~~~~~~~~~~i~iw   63 (343)
                      ......++||.+++||...++....|......  ...+..|.      |              |-..++-|...|.|.+|
T Consensus         6 ~~~A~~~~~g~l~iw~t~~~~~~~e~~p~~~~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlgt~~g~v~~y   85 (541)
T KOG4547|consen    6 DYFALSTGDGRLRIWDTAKNQLQQEFAPIASLSGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLGTPQGSVLLY   85 (541)
T ss_pred             heEeecCCCCeEEEEEccCceeeeeeccchhccCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEeecCCccEEEE
Confidence            44566778999999999998887776543210  33333332      2              33567778888999999


Q ss_pred             eCCCcccceecc--cCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCC
Q psy10867         64 PVNSQEKAQLRL--ICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGED  140 (343)
Q Consensus        64 ~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d  140 (343)
                      ++..++....+.  .|.+.|.++.++.+-..|.+ +.|..+..|+..++..++........+.+++.+||+..+++++  
T Consensus        86 s~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~~~~~~sl~is~D~~~l~~as--  163 (541)
T KOG4547|consen   86 SVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKEQKPLVSSLCISPDGKILLTAS--  163 (541)
T ss_pred             EecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceeeeeeccCCCccceEEEcCCCCEEEecc--
Confidence            999998775554  78999999999887777776 7899999999999999999998889999999999999999887  


Q ss_pred             CeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecC-----CCceEEEEeeCCCeEEEEecC
Q psy10867        141 GTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKL-----GAKSRVASVSHDRTCKIFDLC  215 (343)
Q Consensus       141 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-----~~~~~l~~~~~d~~i~~wd~~  215 (343)
                      ++|++||+++.+                      .+..+.+|.++|.++.|-.+     |. .+|.+...+.-+.+|-.+
T Consensus       164 ~~ik~~~~~~ke----------------------vv~~ftgh~s~v~t~~f~~~~~g~~G~-~vLssa~~~r~i~~w~v~  220 (541)
T KOG4547|consen  164 RQIKVLDIETKE----------------------VVITFTGHGSPVRTLSFTTLIDGIIGK-YVLSSAAAERGITVWVVE  220 (541)
T ss_pred             ceEEEEEccCce----------------------EEEEecCCCcceEEEEEEEeccccccc-eeeeccccccceeEEEEE
Confidence            589999999974                      56677899999999999877     42 344455566778888665


Q ss_pred             C
Q psy10867        216 T  216 (343)
Q Consensus       216 ~  216 (343)
                      .
T Consensus       221 ~  221 (541)
T KOG4547|consen  221 K  221 (541)
T ss_pred             c
Confidence            4

>KOG2314|consensus

Probab=99.53  E-value=1e-11  Score=101.09  Aligned_cols=283  Identities=13%  Similarity=0.145  Sum_probs=183.9

Q ss_pred             CeEEEEecCCceEEEEEecCC--CCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCE
Q psy10867         15 GAISVWEPKGGTLLMSYKGAS--VLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAY   92 (343)
Q Consensus        15 g~i~iwd~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~   92 (343)
                      ..+.|||+.+|...+.|....  ...-.-+.||.|++++|.-.. ..|.||+..+...+....-....|....|+|.+++
T Consensus       282 ~~l~IWDI~tG~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~-~sisIyEtpsf~lld~Kslki~gIr~FswsP~~~l  360 (698)
T KOG2314|consen  282 QQLIIWDIATGLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTG-NSISIYETPSFMLLDKKSLKISGIRDFSWSPTSNL  360 (698)
T ss_pred             ceEEEEEccccchhcceeccCCCccccceEEeccCCceeEEecc-ceEEEEecCceeeecccccCCccccCcccCCCcce
Confidence            589999999999999888732  212234689999999999888 68999998876655444445678999999999999


Q ss_pred             EEE---ecC---CeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEec----------CCCeEEEeecCccceeee
Q psy10867         93 IAV---SIE---TKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGG----------EDGTICVWQLSRLICKQT  156 (343)
Q Consensus        93 l~~---~~d---~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~----------~dg~i~iwd~~~~~~~~~  156 (343)
                      ||-   ..+   ..+.+..+.+++.+++..-|.-.=..+.|-.+|.+|+.--          .-..+.|+.++....   
T Consensus       361 lAYwtpe~~~~parvtL~evPs~~~iRt~nlfnVsDckLhWQk~gdyLcvkvdR~tK~~~~g~f~n~eIfrireKdI---  437 (698)
T KOG2314|consen  361 LAYWTPETNNIPARVTLMEVPSKREIRTKNLFNVSDCKLHWQKSGDYLCVKVDRHTKSKVKGQFSNLEIFRIREKDI---  437 (698)
T ss_pred             EEEEcccccCCcceEEEEecCccceeeeccceeeeccEEEeccCCcEEEEEEEeeccccccceEeeEEEEEeeccCC---
Confidence            995   222   3788999999888877665554445677777888877521          112355555554322   


Q ss_pred             eecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeC---CCeEEEEecCC-Cc---eEEEeecCCcE
Q psy10867        157 VAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSH---DRTCKIFDLCT-GE---DLLSLILDTRL  229 (343)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~---d~~i~~wd~~~-~~---~~~~~~~~~~i  229 (343)
                                        ++... .-...|...+|-|.|+  .+++.+.   ..++.+|.+++ ..   .+..+. ....
T Consensus       438 ------------------pve~v-elke~vi~FaWEP~gd--kF~vi~g~~~k~tvsfY~~e~~~~~~~lVk~~d-k~~~  495 (698)
T KOG2314|consen  438 ------------------PVEVV-ELKESVIAFAWEPHGD--KFAVISGNTVKNTVSFYAVETNIKKPSLVKELD-KKFA  495 (698)
T ss_pred             ------------------Cceee-ecchheeeeeeccCCC--eEEEEEccccccceeEEEeecCCCchhhhhhhc-cccc
Confidence                              22222 2456788999999995  4443322   36788888873 22   222222 2457


Q ss_pred             EEEEEcCCCCEEEEE---cCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCC------
Q psy10867        230 TCVAFDGTEDNIYMG---TSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSAD------  300 (343)
Q Consensus       230 ~~~~~~~~~~~l~~~---~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d------  300 (343)
                      +.+.|+|.|++++++   +..|.+.++|+.......          .....| ...+.+.|.|.|+|+++++.-      
T Consensus       496 N~vfwsPkG~fvvva~l~s~~g~l~F~D~~~a~~k~----------~~~~eh-~~at~veWDPtGRYvvT~ss~wrhk~d  564 (698)
T KOG2314|consen  496 NTVFWSPKGRFVVVAALVSRRGDLEFYDTDYADLKD----------TASPEH-FAATEVEWDPTGRYVVTSSSSWRHKVD  564 (698)
T ss_pred             ceEEEcCCCcEEEEEEecccccceEEEecchhhhhh----------ccCccc-cccccceECCCCCEEEEeeehhhhccc
Confidence            889999999998875   467899999987522111          111223 345778999999999998864      


Q ss_pred             CcEEEEecccceeeeecccCCceEEEEEccCCCeee
Q psy10867        301 ETLKIWHTISRQCLRTIQHKGPVLGAFLGLLPPAIH  336 (343)
Q Consensus       301 g~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~  336 (343)
                      .--++|++. |++++.- ..+....+.|-|-...++
T Consensus       565 ~GYri~tfq-Grll~~~-~i~~f~qF~WRPRPps~L  598 (698)
T KOG2314|consen  565 NGYRIFTFQ-GRLLKED-IIDRFKQFLWRPRPPSLL  598 (698)
T ss_pred             cceEEEEee-cHHHHHH-HHHHHHhhccCCCCCccc
Confidence            345666653 2222210 112233445555554444

>KOG1064|consensus

Probab=99.51  E-value=2.7e-13  Score=123.73  Aligned_cols=191  Identities=14%  Similarity=0.202  Sum_probs=152.3

Q ss_pred             cceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecc-cCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCCceEEEe
Q psy10867         38 SPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRL-ICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATA  115 (343)
Q Consensus        38 ~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~  115 (343)
                      .|.++.-+|...+..+|+.||.+++|....++.+..+. .....|+.+.|+.+|+.+.. ..||.+.+|... .++....
T Consensus      2210 ~v~r~~sHp~~~~Yltgs~dgsv~~~~w~~~~~v~~~rt~g~s~vtr~~f~~qGnk~~i~d~dg~l~l~q~~-pk~~~s~ 2288 (2439)
T KOG1064|consen 2210 NVRRMTSHPSDPYYLTGSQDGSVRMFEWGHGQQVVCFRTAGNSRVTRSRFNHQGNKFGIVDGDGDLSLWQAS-PKPYTSW 2288 (2439)
T ss_pred             ceeeecCCCCCceEEecCCCceEEEEeccCCCeEEEeeccCcchhhhhhhcccCCceeeeccCCceeecccC-Ccceecc
Confidence            77888888888777777778999999998888774433 34488999999999887775 579999999976 6667777


Q ss_pred             cccCCCeEEEEEecCCCEEEEec---CCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEee
Q psy10867        116 SSHYQPITIVKWSADSNFIVTGG---EDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLS  192 (343)
Q Consensus       116 ~~~~~~v~~~~~~~~~~~l~s~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  192 (343)
                      +.|........|-.  ..+++++   .++.+.+||..-.....                   .+.  ..|.+.++++++.
T Consensus      2289 qchnk~~~Df~Fi~--s~~~tag~s~d~~n~~lwDtl~~~~~s-------------------~v~--~~H~~gaT~l~~~ 2345 (2439)
T KOG1064|consen 2289 QCHNKALSDFRFIG--SLLATAGRSSDNRNVCLWDTLLPPMNS-------------------LVH--TCHDGGATVLAYA 2345 (2439)
T ss_pred             ccCCccccceeeee--hhhhccccCCCCCcccchhcccCcccc-------------------eee--eecCCCceEEEEc
Confidence            88999899999875  5667654   47889999976542211                   222  6799999999999


Q ss_pred             cCCCceEEEEeeCCCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeeccccccc
Q psy10867        193 KLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRD  263 (343)
Q Consensus       193 ~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~  263 (343)
                      |..  ++|++|+.+|.+++||++..+....++.        ++ ...++++|+..|.++||++........
T Consensus      2346 P~~--qllisggr~G~v~l~D~rqrql~h~~~~--------~~-~~~~f~~~ss~g~ikIw~~s~~~ll~~ 2405 (2439)
T KOG1064|consen 2346 PKH--QLLISGGRKGEVCLFDIRQRQLRHTFQA--------LD-TREYFVTGSSEGNIKIWRLSEFGLLHT 2405 (2439)
T ss_pred             Ccc--eEEEecCCcCcEEEeehHHHHHHHHhhh--------hh-hhheeeccCcccceEEEEccccchhhc
Confidence            998  8999999999999999998877666543        34 567899999999999999998755443

>KOG2041|consensus

Probab=99.50  E-value=2.7e-12  Score=107.58  Aligned_cols=263  Identities=10%  Similarity=0.083  Sum_probs=191.6

Q ss_pred             CcceEEEEeCCceEEEEEcCCCeEEEEeCCCcc---------------cceecccCCcceEEEEECCCCCEEEEe-cCCe
Q psy10867         37 LSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQE---------------KAQLRLICPGRISSMQASPDAAYIAVS-IETK  100 (343)
Q Consensus        37 ~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~---------------~~~~~~~~~~~v~~~~~s~~~~~l~~~-~d~~  100 (343)
                      ....|++|+.+..++++|+.||.+++..+.+..               .-+.+.+|...|.-+.|+.+.+.|.++ .+|.
T Consensus        15 vkL~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTtSDt~Gl   94 (1189)
T KOG2041|consen   15 VKLHCAEWNKESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLTTSDTSGL   94 (1189)
T ss_pred             ceEEEEEEcccCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccccccccccCCCce
Confidence            378999999998899999999999999775421               125567999999999999988888875 6899


Q ss_pred             EEEEEccCCceEEEec--ccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeee
Q psy10867        101 LHMWQISSGRLLATAS--SHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHV  178 (343)
Q Consensus       101 i~v~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (343)
                      |.+|-+-.|.-...+.  ...+.|.+++|+.+|..++..-.||.|.+=.++..+.-..                      
T Consensus        95 IiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsvdGNRIwgK----------------------  152 (1189)
T KOG2041|consen   95 IIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSVDGNRIWGK----------------------  152 (1189)
T ss_pred             EEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEeeccceecch----------------------
Confidence            9999998876443332  3456789999999999999999999998877765432111                      


Q ss_pred             ecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCce-----EEEee-------cCCcEEEEEEc--------CCC
Q psy10867        179 KSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGED-----LLSLI-------LDTRLTCVAFD--------GTE  238 (343)
Q Consensus       179 ~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~-----~~~~~-------~~~~i~~~~~~--------~~~  238 (343)
                       .-.......+.|+++.  ..++.+-..|.+.+||.+..-.     -....       .+..+..+.|.        |+.
T Consensus       153 -eLkg~~l~hv~ws~D~--~~~Lf~~ange~hlydnqgnF~~Kl~~~c~Vn~tg~~s~~~~kia~i~w~~g~~~~v~pdr  229 (1189)
T KOG2041|consen  153 -ELKGQLLAHVLWSEDL--EQALFKKANGETHLYDNQGNFERKLEKDCEVNGTGIFSNFPTKIAEIEWNTGPYQPVPPDR  229 (1189)
T ss_pred             -hcchheccceeecccH--HHHHhhhcCCcEEEecccccHHHhhhhceEEeeeeeecCCCccccceeeccCccccCCCCC
Confidence             0112234478899998  7888888899999999653211     01011       13335566663        477


Q ss_pred             CEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCC---------CcEEEEecc
Q psy10867        239 DNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSAD---------ETLKIWHTI  309 (343)
Q Consensus       239 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d---------g~i~iwd~~  309 (343)
                      ..|+++..+|.+.|..-.+...+.            +....-.+....|+++|..||.++.|         +.|.+|. .
T Consensus       230 P~lavcy~nGr~QiMR~eND~~Pv------------v~dtgm~~vgakWnh~G~vLAvcG~~~da~~~~d~n~v~Fys-p  296 (1189)
T KOG2041|consen  230 PRLAVCYANGRMQIMRSENDPEPV------------VVDTGMKIVGAKWNHNGAVLAVCGNDSDADEPTDSNKVHFYS-P  296 (1189)
T ss_pred             CEEEEEEcCceehhhhhcCCCCCe------------EEecccEeecceecCCCcEEEEccCcccccCccccceEEEec-c
Confidence            889999999998887655433322            11223568889999999999998865         2566666 3


Q ss_pred             cceeeeecc-cCCceEEEEEccCCCeeee
Q psy10867        310 SRQCLRTIQ-HKGPVLGAFLGLLPPAIHD  337 (343)
Q Consensus       310 ~~~~~~~~~-~~~~v~~~~~sp~~~~l~~  337 (343)
                      -|+.+.+++ ....|++++|-..|-.++.
T Consensus       297 ~G~i~gtlkvpg~~It~lsWEg~gLriA~  325 (1189)
T KOG2041|consen  297 YGHIVGTLKVPGSCITGLSWEGTGLRIAI  325 (1189)
T ss_pred             chhheEEEecCCceeeeeEEcCCceEEEE
Confidence            578889998 7888999999887766543

>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal

Probab=99.49  E-value=1.5e-10  Score=87.02  Aligned_cols=220  Identities=11%  Similarity=0.162  Sum_probs=141.8

Q ss_pred             EEEECCCCCEEEEecCCeEEEEEccCC--ceEEEeccc---CCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeee
Q psy10867         83 SMQASPDAAYIAVSIETKLHMWQISSG--RLLATASSH---YQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTV  157 (343)
Q Consensus        83 ~~~~s~~~~~l~~~~d~~i~v~~~~~~--~~~~~~~~~---~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~  157 (343)
                      .++.+.+|++||.-.|..|.|-..++.  ..+.+....   .-.-+.++|+||+..||.+...|+|+++|+.... ...+
T Consensus         2 ~~~~~~~Gk~lAi~qd~~iEiRsa~Ddf~si~~kcqVpkD~~PQWRkl~WSpD~tlLa~a~S~G~i~vfdl~g~~-lf~I   80 (282)
T PF15492_consen    2 HLALSSDGKLLAILQDQCIEIRSAKDDFSSIIGKCQVPKDPNPQWRKLAWSPDCTLLAYAESTGTIRVFDLMGSE-LFVI   80 (282)
T ss_pred             ceeecCCCcEEEEEeccEEEEEeccCCchheeEEEecCCCCCchheEEEECCCCcEEEEEcCCCeEEEEecccce-eEEc
Confidence            356788999999999999998876654  333333322   2245789999999999999999999999997632 2222


Q ss_pred             ecCCCCCCCCccccccceeeeecccccceEEEEeecCCC----ceEEEEeeCCCeEEEEecCCC-----ceEEEee----
Q psy10867        158 AFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGA----KSRVASVSHDRTCKIFDLCTG-----EDLLSLI----  224 (343)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~----~~~l~~~~~d~~i~~wd~~~~-----~~~~~~~----  224 (343)
                      ....               .....-...|..+.|.+...    ...|+.-..+|.++-|-+..+     +....+.    
T Consensus        81 ~p~~---------------~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~vs~gt~q~y~e~hsfsf~~~  145 (282)
T PF15492_consen   81 PPAM---------------SFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYLVSVGTNQGYQENHSFSFSSH  145 (282)
T ss_pred             Cccc---------------ccCCccccceeeeEeeccccccccceeEEEEeccceeeeEEEEcccCCcceeeEEEEeccc
Confidence            2100               00011234566666654320    035666677888887765322     2333333    


Q ss_pred             cCCcEEEEEEcCCCCEEEEEcCCC-----------cEEEEEeecccccccccccCCCC------------CCc------c
Q psy10867        225 LDTRLTCVAFDGTEDNIYMGTSEG-----------VIKSFCLRQVPRTRDHHIQDSTS------------NPD------F  275 (343)
Q Consensus       225 ~~~~i~~~~~~~~~~~l~~~~~d~-----------~i~i~d~~~~~~~~~~~~~~~~~------------~~~------~  275 (343)
                      ++..|.++.++|..++|++|+...           -+..|.+-+...-.+........            +..      .
T Consensus       146 yp~Gi~~~vy~p~h~LLlVgG~~~~~~~~s~a~~~GLtaWRiL~~~Pyyk~v~~~~~~~~~~~~~~~~~~~~~~~~fs~~  225 (282)
T PF15492_consen  146 YPHGINSAVYHPKHRLLLVGGCEQNQDGMSKASSCGLTAWRILSDSPYYKQVTSSEDDITASSKRRGLLRIPSFKFFSRQ  225 (282)
T ss_pred             CCCceeEEEEcCCCCEEEEeccCCCCCccccccccCceEEEEcCCCCcEEEccccCccccccccccceeeccceeeeecc
Confidence            367899999999999888875421           35667665432211100000000            000      1


Q ss_pred             ccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc
Q psy10867        276 IGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ  318 (343)
Q Consensus       276 ~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~  318 (343)
                      ......|..|..||||+.||+...+|.|.+|++.+.++.+...
T Consensus       226 ~~~~d~i~kmSlSPdg~~La~ih~sG~lsLW~iPsL~~~~~W~  268 (282)
T PF15492_consen  226 GQEQDGIFKMSLSPDGSLLACIHFSGSLSLWEIPSLRLQRSWK  268 (282)
T ss_pred             ccCCCceEEEEECCCCCEEEEEEcCCeEEEEecCcchhhcccc
Confidence            1235679999999999999999999999999999988877776

>KOG1064|consensus

Probab=99.49  E-value=2.9e-13  Score=123.51  Aligned_cols=182  Identities=14%  Similarity=0.248  Sum_probs=143.7

Q ss_pred             ceEEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEE
Q psy10867          5 NEVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSM   84 (343)
Q Consensus         5 ~~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~   84 (343)
                      .-.-+++++||.|++|.+..++.+..++......|+.+.|+.+|.-+..+..||.+.+|... .+.......|......+
T Consensus      2220 ~~~Yltgs~dgsv~~~~w~~~~~v~~~rt~g~s~vtr~~f~~qGnk~~i~d~dg~l~l~q~~-pk~~~s~qchnk~~~Df 2298 (2439)
T KOG1064|consen 2220 DPYYLTGSQDGSVRMFEWGHGQQVVCFRTAGNSRVTRSRFNHQGNKFGIVDGDGDLSLWQAS-PKPYTSWQCHNKALSDF 2298 (2439)
T ss_pred             CceEEecCCCceEEEEeccCCCeEEEeeccCcchhhhhhhcccCCceeeeccCCceeecccC-CcceeccccCCccccce
Confidence            34457899999999999999999888775443489999999999888888888999999987 33344555788888889


Q ss_pred             EECCCCCEEEE----ecCCeEEEEEccCC---ceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeee
Q psy10867         85 QASPDAAYIAV----SIETKLHMWQISSG---RLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTV  157 (343)
Q Consensus        85 ~~s~~~~~l~~----~~d~~i~v~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~  157 (343)
                      +|-.  ..+++    +.++.+.+||..-.   .++.  ..|.+.++++++.|..+.|++|+.+|.|++||++..+...++
T Consensus      2299 ~Fi~--s~~~tag~s~d~~n~~lwDtl~~~~~s~v~--~~H~~gaT~l~~~P~~qllisggr~G~v~l~D~rqrql~h~~ 2374 (2439)
T KOG1064|consen 2299 RFIG--SLLATAGRSSDNRNVCLWDTLLPPMNSLVH--TCHDGGATVLAYAPKHQLLISGGRKGEVCLFDIRQRQLRHTF 2374 (2439)
T ss_pred             eeee--hhhhccccCCCCCcccchhcccCcccceee--eecCCCceEEEEcCcceEEEecCCcCcEEEeehHHHHHHHHh
Confidence            8875  55554    24679999995422   2333  679999999999999999999999999999999986544332


Q ss_pred             ecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeec
Q psy10867        158 AFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLIL  225 (343)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~  225 (343)
                      +                           .    +. ..  .++++|+..|.++||++.....+.++.+
T Consensus      2375 ~---------------------------~----~~-~~--~~f~~~ss~g~ikIw~~s~~~ll~~~p~ 2408 (2439)
T KOG1064|consen 2375 Q---------------------------A----LD-TR--EYFVTGSSEGNIKIWRLSEFGLLHTFPS 2408 (2439)
T ss_pred             h---------------------------h----hh-hh--heeeccCcccceEEEEccccchhhcCch
Confidence            1                           1    23 22  6899999999999999998877777663

>KOG4532|consensus

Probab=99.48  E-value=4.2e-11  Score=88.86  Aligned_cols=236  Identities=9%  Similarity=0.012  Sum_probs=154.4

Q ss_pred             eEEEEEcCCCeEEEEeCCCcccc-eecccCCcceEEEEECC--CCCEEEEecCCeEEEEEccCCceEEEecccCCCeEEE
Q psy10867         49 YVLGVEKGKPMIQAWPVNSQEKA-QLRLICPGRISSMQASP--DAAYIAVSIETKLHMWQISSGRLLATASSHYQPITIV  125 (343)
Q Consensus        49 ~~~~~~~~~~~i~iw~~~~~~~~-~~~~~~~~~v~~~~~s~--~~~~l~~~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~  125 (343)
                      .++|.|+..|...+|...+.+.. +.-..+...|+-+.=.-  ....+.++.|.++++.+++-+.....+....-.+.++
T Consensus        85 ~~la~gG~~g~fd~~~~~tn~~h~~~cd~snn~v~~~~r~cd~~~~~~i~sndht~k~~~~~~~s~~~~~h~~~~~~ns~  164 (344)
T KOG4532|consen   85 VTLADGGASGQFDLFACNTNDGHLYQCDVSNNDVTLVKRYCDLKFPLNIASNDHTGKTMVVSGDSNKFAVHNQNLTQNSL  164 (344)
T ss_pred             cEEEeccccceeeeecccCcccceeeecccccchhhhhhhcccccceeeccCCcceeEEEEecCcccceeeccccceeee
Confidence            45555555599999999876644 32333444333222111  2346667888888988887554333322111237899


Q ss_pred             EEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeC
Q psy10867        126 KWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSH  205 (343)
Q Consensus       126 ~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~  205 (343)
                      +++++++++++.+....|..|.+.......                   ...........-.+..|+...  ..+|++..
T Consensus       165 ~~snd~~~~~~Vgds~~Vf~y~id~~sey~-------------------~~~~~a~t~D~gF~~S~s~~~--~~FAv~~Q  223 (344)
T KOG4532|consen  165 HYSNDPSWGSSVGDSRRVFRYAIDDESEYI-------------------ENIYEAPTSDHGFYNSFSEND--LQFAVVFQ  223 (344)
T ss_pred             EEcCCCceEEEecCCCcceEEEeCCcccee-------------------eeeEecccCCCceeeeeccCc--ceEEEEec
Confidence            999999999999999999999987642211                   001222333445577888877  79999999


Q ss_pred             CCeEEEEecCCCceEEEe------ecCCcEEEEEEcCCCC--EEEEEcCCCcEEEEEeecccccccccccCCCCCCcccc
Q psy10867        206 DRTCKIFDLCTGEDLLSL------ILDTRLTCVAFDGTED--NIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIG  277 (343)
Q Consensus       206 d~~i~~wd~~~~~~~~~~------~~~~~i~~~~~~~~~~--~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~  277 (343)
                      ||++.|||++........      .|.+.+..+.|++.|.  +|+..-.-+.+.+.|+++....+...+....    ...
T Consensus       224 dg~~~I~DVR~~~tpm~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~~~~~q~I~i~~d~----~~~  299 (344)
T KOG4532|consen  224 DGTCAIYDVRNMATPMAEISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTRNYVNHQVIVIPDDV----ERK  299 (344)
T ss_pred             CCcEEEEEecccccchhhhcccCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEcccCceeeEEecCccc----ccc
Confidence            999999999976543222      2677899999998663  6777777889999999987665544332222    222


Q ss_pred             cc-CcEEEEEEccCCCEEEEEeCCCcEEEEeccc
Q psy10867        278 HE-KQVTSLSCSITGITLLSSSADETLKIWHTIS  310 (343)
Q Consensus       278 ~~-~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~  310 (343)
                      |. ..|..-.|+.++.-+.+.+++ .+.-|++.+
T Consensus       300 ~~tq~ifgt~f~~~n~s~~v~~e~-~~ae~ni~s  332 (344)
T KOG4532|consen  300 HNTQHIFGTNFNNENESNDVKNEL-QGAEYNILS  332 (344)
T ss_pred             ccccccccccccCCCcccccccch-hhheeeccc
Confidence            33 347888888877766666655 455566544

>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]

Probab=99.47  E-value=8.3e-11  Score=94.22  Aligned_cols=214  Identities=14%  Similarity=0.068  Sum_probs=153.5

Q ss_pred             EeCCceEEEEEcCCCeEEEEeCCCcccceeccc------C--CcceE---EEE-ECC-CCCEEEEecCCeEEEEEccCCc
Q psy10867         44 LLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLI------C--PGRIS---SMQ-ASP-DAAYIAVSIETKLHMWQISSGR  110 (343)
Q Consensus        44 ~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~------~--~~~v~---~~~-~s~-~~~~l~~~~d~~i~v~~~~~~~  110 (343)
                      .+.||+.++-... |.|.+||.++....+.-.+      .  ...+.   -+. |++ +|.+++.-+.|...+.+...+-
T Consensus       274 ~nsDGkrIvFq~~-GdIylydP~td~lekldI~lpl~rk~k~~k~~~pskyledfa~~~Gd~ia~VSRGkaFi~~~~~~~  352 (668)
T COG4946         274 ANSDGKRIVFQNA-GDIYLYDPETDSLEKLDIGLPLDRKKKQPKFVNPSKYLEDFAVVNGDYIALVSRGKAFIMRPWDGY  352 (668)
T ss_pred             cCCCCcEEEEecC-CcEEEeCCCcCcceeeecCCccccccccccccCHHHhhhhhccCCCcEEEEEecCcEEEECCCCCe
Confidence            3567877777666 7899999887664432111      0  00111   111 333 6888888778888888876665


Q ss_pred             eEEEecccCCCeEEEEEecCCCEEEEecCCC-eEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEE
Q psy10867        111 LLATASSHYQPITIVKWSADSNFIVTGGEDG-TICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHV  189 (343)
Q Consensus       111 ~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  189 (343)
                      .++.  +|.+.|.-..+.-+++-++.|..|| .+-++|.+++                       ........-+.|.++
T Consensus       353 ~iqv--~~~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~-----------------------e~kr~e~~lg~I~av  407 (668)
T COG4946         353 SIQV--GKKGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGG-----------------------EVKRIEKDLGNIEAV  407 (668)
T ss_pred             eEEc--CCCCceEEEEEccCCcceEEeccCCceEEEEecCCc-----------------------eEEEeeCCccceEEE
Confidence            5443  5677788888888888899999999 8999999987                       445555677889999


Q ss_pred             EeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCCEEEEEcCCC----cEEEEEeecccccccc
Q psy10867        190 TLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIYMGTSEG----VIKSFCLRQVPRTRDH  264 (343)
Q Consensus       190 ~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~----~i~i~d~~~~~~~~~~  264 (343)
                      ..+++|  ++++.+.....|.+.|++++.....-+ ..+-|+.+.|+|+++++|-+--+|    .|+++|+...+...  
T Consensus       408 ~vs~dG--K~~vvaNdr~el~vididngnv~~idkS~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~~Kiy~--  483 (668)
T COG4946         408 KVSPDG--KKVVVANDRFELWVIDIDNGNVRLIDKSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGGKIYD--  483 (668)
T ss_pred             EEcCCC--cEEEEEcCceEEEEEEecCCCeeEecccccceeEEEEEcCCceeEEEecCcceeeeeEEEEecCCCeEEE--
Confidence            999999  789999889999999999998654333 456699999999999999987766    68999988743221  


Q ss_pred             cccCCCCCCccccccCcEEEEEEccCCCEEEEE
Q psy10867        265 HIQDSTSNPDFIGHEKQVTSLSCSITGITLLSS  297 (343)
Q Consensus       265 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~  297 (343)
                                .....+.=.+-+|.||+++|.--
T Consensus       484 ----------vTT~ta~DfsPaFD~d~ryLYfL  506 (668)
T COG4946         484 ----------VTTPTAYDFSPAFDPDGRYLYFL  506 (668)
T ss_pred             ----------ecCCcccccCcccCCCCcEEEEE
Confidence                      11122223455788888876643

>KOG1912|consensus

Probab=99.47  E-value=6e-11  Score=100.49  Aligned_cols=321  Identities=16%  Similarity=0.086  Sum_probs=201.4

Q ss_pred             EEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCC---c-eEEEEEcCCCeEEEEeCCCcccceecccCCcceE
Q psy10867          7 VAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGN---D-YVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRIS   82 (343)
Q Consensus         7 ~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~---~-~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~   82 (343)
                      ++.++|-.|.|.+||...+..+..++.+.. ++..++|-+.   . .++++-....++.+|+..+|+.............
T Consensus        81 liAsaD~~GrIil~d~~~~s~~~~l~~~~~-~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~k~Wk~~ys~~iLs  159 (1062)
T KOG1912|consen   81 LIASADISGRIILVDFVLASVINWLSHSND-SVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGEKFWKYDYSHEILS  159 (1062)
T ss_pred             eEEeccccCcEEEEEehhhhhhhhhcCCCc-chhheeeeeccCcchheeEEecCCcEEEEEEccCCceeeccccCCccee
Confidence            456777789999999999999999999998 9999999863   2 4555544458999999999987654444344555


Q ss_pred             EEEECC-CCCEEE-EecCCeEEEE--------------------------------------------------------
Q psy10867         83 SMQASP-DAAYIA-VSIETKLHMW--------------------------------------------------------  104 (343)
Q Consensus        83 ~~~~s~-~~~~l~-~~~d~~i~v~--------------------------------------------------------  104 (343)
                      |+.+.| |.+.++ .+..|.+.+-                                                        
T Consensus       160 ~f~~DPfd~rh~~~l~s~g~vl~~~~l~~sep~~pgk~~qI~sd~Sdl~~lere~at~ns~ts~~~sa~fity~a~faf~  239 (1062)
T KOG1912|consen  160 CFRVDPFDSRHFCVLGSKGFVLSCKDLGLSEPDVPGKEFQITSDHSDLAHLERETATGNSTTSTPASAYFITYCAQFAFS  239 (1062)
T ss_pred             eeeeCCCCcceEEEEccCceEEEEeccCCCCCCCCceeEEEecCccchhhhhhhhhccccccCCCcchhHHHHHHhhhcC
Confidence            566655 322222 2333333322                                                        


Q ss_pred             ------------------EccCCceEEEecccCCCeEEEEEecCCC--EEEEecCCCeEEEeecCccceeeee-------
Q psy10867        105 ------------------QISSGRLLATASSHYQPITIVKWSADSN--FIVTGGEDGTICVWQLSRLICKQTV-------  157 (343)
Q Consensus       105 ------------------~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~s~~~dg~i~iwd~~~~~~~~~~-------  157 (343)
                                        |++-..++....-..+.+.-+.+.|+++  .|++...||.+.+|-.+......+.       
T Consensus       240 p~~rn~lfi~~prellv~dle~~~~l~vvpier~~akfv~vlP~~~rd~LfclH~nG~ltirvrk~~~~~f~~~~~~l~~  319 (1062)
T KOG1912|consen  240 PHWRNILFITFPRELLVFDLEYECCLAVVPIERGGAKFVDVLPDPRRDALFCLHSNGRLTIRVRKEEPTEFKKPNASLSM  319 (1062)
T ss_pred             hhhhceEEEEeccceEEEcchhhceeEEEEeccCCcceeEeccCCCcceEEEEecCCeEEEEEeeccCccccccchhhcc
Confidence                              2222222222222344455666777554  6888999999999976552111111       


Q ss_pred             ------------ecCCCC-----C-------------------------CCCcccccc--------------------ce
Q psy10867        158 ------------AFGIPG-----S-------------------------SGKGVTGLT--------------------EP  175 (343)
Q Consensus       158 ------------~~~~~~-----~-------------------------~~~~~~~~~--------------------~~  175 (343)
                                  +-..+.     .                         .........                    ..
T Consensus       320 dl~~Q~~~vr~m~~~rp~~~~~cPs~~sa~avl~s~g~~~~w~l~~~ri~~~~~s~~iel~~pf~f~~~~~~v~k~~l~~  399 (1062)
T KOG1912|consen  320 DLGEQVHVVRPMEEFRPVIGASCPSTPSALAVLYSSGDSTFWQLSNGRIHLDYRSSSIELVLPFDFNLSTKLVGKTSLIS  399 (1062)
T ss_pred             ccccceEEEeechhcccceeecCCCChhhhhhhhhcchhHHHhhhcCCcCcccccccccccccccccCceeehhhccccc
Confidence                        000000     0                         000000000                    00


Q ss_pred             eeeecccccceEEEEeecCC-----------C-----ceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCC
Q psy10867        176 LHVKSQHSLPVTHVTLSKLG-----------A-----KSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTE  238 (343)
Q Consensus       176 ~~~~~~~~~~v~~~~~~~~~-----------~-----~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~  238 (343)
                      +....+|.....+....|-.           +     -.+++.|...|+|.++|+.++.....+. |.+.|.++.|-.+.
T Consensus       400 LS~dg~h~sGs~~~~~~p~p~~t~~~~~p~~n~~~~~~pLvAvGT~sGTV~vvdvst~~v~~~fsvht~~VkgleW~g~s  479 (1062)
T KOG1912|consen  400 LSDDGSHSSGSTCVRMRPMPELTKVENDPGGNTPAGTVPLVAVGTNSGTVDVVDVSTNAVAASFSVHTSLVKGLEWLGNS  479 (1062)
T ss_pred             hhhcCCCCCCceeeecccCcccceeecCCCCCccceeeeeEEeecCCceEEEEEecchhhhhhhcccccceeeeeeccce
Confidence            01112344455554443321           0     1468889999999999999998877776 78889999998766


Q ss_pred             CEEEEEc---------CCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecc
Q psy10867        239 DNIYMGT---------SEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTI  309 (343)
Q Consensus       239 ~~l~~~~---------~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~  309 (343)
                      .++-.+.         .-+.+.+-|++++......        ..-.....+|..+..|..++||+..-.|.-+-+||++
T Consensus       480 slvSfsys~~n~~sg~vrN~l~vtdLrtGlsk~fR--------~l~~~despI~~irvS~~~~yLai~Fr~~plEiwd~k  551 (1062)
T KOG1912|consen  480 SLVSFSYSHVNSASGGVRNDLVVTDLRTGLSKRFR--------GLQKPDESPIRAIRVSSSGRYLAILFRREPLEIWDLK  551 (1062)
T ss_pred             eEEEeeeccccccccceeeeEEEEEcccccccccc--------cCCCCCcCcceeeeecccCceEEEEecccchHHHhhc
Confidence            6554432         2235677788876443211        1122346789999999999999999999999999998


Q ss_pred             cceeeeecccCCc-eEEEEEc-cCCCeee
Q psy10867        310 SRQCLRTIQHKGP-VLGAFLG-LLPPAIH  336 (343)
Q Consensus       310 ~~~~~~~~~~~~~-v~~~~~s-p~~~~l~  336 (343)
                      +..+++.....-+ |+.+.|+ |.-+.+.
T Consensus       552 t~~~lr~mS~a~P~it~leWsl~~~~si~  580 (1062)
T KOG1912|consen  552 TLRMLRLMSLALPLITVLEWSLPKHPSIK  580 (1062)
T ss_pred             cchHHHHHhhcCCcEEEEeecccCCCCcc
Confidence            8888777764445 9999998 5544443

>KOG1409|consensus

Probab=99.46  E-value=7.7e-12  Score=95.83  Aligned_cols=248  Identities=14%  Similarity=0.208  Sum_probs=171.5

Q ss_pred             eEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEe-CCCcccc-eecccCCcceEEEEECCCCCEEEEe-cCCeEE
Q psy10867         26 TLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWP-VNSQEKA-QLRLICPGRISSMQASPDAAYIAVS-IETKLH  102 (343)
Q Consensus        26 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~-~~~~~~~-~~~~~~~~~v~~~~~s~~~~~l~~~-~d~~i~  102 (343)
                      ..++.++||.+ .++....-|...-+.+.++|.++++|- .+.++.- .+....+.+++++.+.++...|.++ ..|++.
T Consensus        15 ~ll~~~eG~~d-~vn~~~l~~~e~gv~~~s~drtvrv~lkrds~q~wpsI~~~mP~~~~~~~y~~e~~~L~vg~~ngtvt   93 (404)
T KOG1409|consen   15 ELLSKIEGSQD-DVNAAILIPKEEGVISVSEDRTVRVWLKRDSGQYWPSIYHYMPSPCSAMEYVSESRRLYVGQDNGTVT   93 (404)
T ss_pred             hhhhhhcCchh-hhhhheeccCCCCeEEccccceeeeEEeccccccCchhhhhCCCCceEeeeeccceEEEEEEecceEE
Confidence            44667889988 888877777665566666679999994 3444433 2223456789999999999988886 567888


Q ss_pred             EEEcc----CCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeee
Q psy10867        103 MWQIS----SGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHV  178 (343)
Q Consensus       103 v~~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (343)
                      -+.+.    .....+....|...+..+-|+....++++.+.|..+.---.+.+.....+.+                   
T Consensus        94 efs~sedfnkm~~~r~~~~h~~~v~~~if~~~~e~V~s~~~dk~~~~hc~e~~~~lg~Y~~-------------------  154 (404)
T KOG1409|consen   94 EFALSEDFNKMTFLKDYLAHQARVSAIVFSLTHEWVLSTGKDKQFAWHCTESGNRLGGYNF-------------------  154 (404)
T ss_pred             EEEhhhhhhhcchhhhhhhhhcceeeEEecCCceeEEEeccccceEEEeeccCCcccceEe-------------------
Confidence            88654    3345566678999999999999999999999988765443443322211110                   


Q ss_pred             ecccccceEEEEeecCCCceEEEEeeCCCeEEEEecC--CCceEEEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEe
Q psy10867        179 KSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLC--TGEDLLSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCL  255 (343)
Q Consensus       179 ~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~--~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~  255 (343)
                          ....+++.+.-    .+...|...|.+....+.  .-..+.++. +...+.++.|.|....|++|..|..+.+||+
T Consensus       155 ----~~~~t~~~~d~----~~~fvGd~~gqvt~lr~~~~~~~~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdi  226 (404)
T KOG1409|consen  155 ----ETPASALQFDA----LYAFVGDHSGQITMLKLEQNGCQLITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDI  226 (404)
T ss_pred             ----eccCCCCceee----EEEEecccccceEEEEEeecCCceEEEEcCcccceEEEEEcCCCcEEEeccccCceEEEec
Confidence                00000000000    123334444444443332  223344444 7888999999999999999999999999999


Q ss_pred             ecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccc
Q psy10867        256 RQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISR  311 (343)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~  311 (343)
                      -.....          ...+.+|...|..+..-+.-+.+++++.||.|-+|++...
T Consensus       227 gg~~g~----------~~el~gh~~kV~~l~~~~~t~~l~S~~edg~i~~w~mn~~  272 (404)
T KOG1409|consen  227 GGRKGT----------AYELQGHNDKVQALSYAQHTRQLISCGEDGGIVVWNMNVK  272 (404)
T ss_pred             cCCcce----------eeeeccchhhhhhhhhhhhheeeeeccCCCeEEEEeccce
Confidence            764322          4467789999999988888889999999999999998643

>PRK04043 tolB translocation protein TolB; Provisional

Probab=99.46  E-value=3e-10  Score=95.19  Aligned_cols=224  Identities=10%  Similarity=-0.036  Sum_probs=132.1

Q ss_pred             eEEEEeCCCcccceecccCCcceEEEEECCCCCE-EE-Eec---CCeEEEEEccCCceEEEecccCCCeEEEEEecCCCE
Q psy10867         59 MIQAWPVNSQEKAQLRLICPGRISSMQASPDAAY-IA-VSI---ETKLHMWQISSGRLLATASSHYQPITIVKWSADSNF  133 (343)
Q Consensus        59 ~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~-l~-~~~---d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  133 (343)
                      .|.+=|.+..........  +......|+|||+. ++ ++.   +..|+++|+.+++...... ..+......|+|||+.
T Consensus       170 ~l~~~d~dg~~~~~~~~~--~~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt~-~~g~~~~~~~SPDG~~  246 (419)
T PRK04043        170 NIVLADYTLTYQKVIVKG--GLNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEKIAS-SQGMLVVSDVSKDGSK  246 (419)
T ss_pred             eEEEECCCCCceeEEccC--CCeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEEEec-CCCcEEeeEECCCCCE
Confidence            555556655443333322  37788999999984 55 333   3579999998887655443 4555667889999987


Q ss_pred             EEEe-cC--CCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEee-CCC--
Q psy10867        134 IVTG-GE--DGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVS-HDR--  207 (343)
Q Consensus       134 l~s~-~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~-~d~--  207 (343)
                      ++.. +.  +..|.++|+.++..                       ..+..+........|+|+|  +.|+..+ ..+  
T Consensus       247 la~~~~~~g~~~Iy~~dl~~g~~-----------------------~~LT~~~~~d~~p~~SPDG--~~I~F~Sdr~g~~  301 (419)
T PRK04043        247 LLLTMAPKGQPDIYLYDTNTKTL-----------------------TQITNYPGIDVNGNFVEDD--KRIVFVSDRLGYP  301 (419)
T ss_pred             EEEEEccCCCcEEEEEECCCCcE-----------------------EEcccCCCccCccEECCCC--CEEEEEECCCCCc
Confidence            6643 33  34677778776532                       2222233223456799999  4444443 333  


Q ss_pred             eEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcCC---------CcEEEEEeecccccccccccCCCCCCccccc
Q psy10867        208 TCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSE---------GVIKSFCLRQVPRTRDHHIQDSTSNPDFIGH  278 (343)
Q Consensus       208 ~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d---------~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~  278 (343)
                      .|.+.|+.+++..+......  ....|+|+|++|+.....         ..|.+.|+.......            +...
T Consensus       302 ~Iy~~dl~~g~~~rlt~~g~--~~~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~~~~------------LT~~  367 (419)
T PRK04043        302 NIFMKKLNSGSVEQVVFHGK--NNSSVSTYKNYIVYSSRETNNEFGKNTFNLYLISTNSDYIRR------------LTAN  367 (419)
T ss_pred             eEEEEECCCCCeEeCccCCC--cCceECCCCCEEEEEEcCCCcccCCCCcEEEEEECCCCCeEE------------CCCC
Confidence            68888888776643332222  134899999988876543         257777776543211            1111


Q ss_pred             cCcEEEEEEccCCCEEEEEeCC-C--cEEEEecccceeeeecc-cCCceEEE
Q psy10867        279 EKQVTSLSCSITGITLLSSSAD-E--TLKIWHTISRQCLRTIQ-HKGPVLGA  326 (343)
Q Consensus       279 ~~~v~~~~~s~~~~~l~s~~~d-g--~i~iwd~~~~~~~~~~~-~~~~v~~~  326 (343)
                       .......|+|||+.|+..+.+ +  .+.+.++. |.....+. ..+.+...
T Consensus       368 -~~~~~p~~SPDG~~I~f~~~~~~~~~L~~~~l~-g~~~~~l~~~~g~~~~p  417 (419)
T PRK04043        368 -GVNQFPRFSSDGGSIMFIKYLGNQSALGIIRLN-YNKSFLFPLKVGKIQSI  417 (419)
T ss_pred             -CCcCCeEECCCCCEEEEEEccCCcEEEEEEecC-CCeeEEeecCCCccCCC
Confidence             122357899999987755543 2  36666664 33333333 34444443

>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL

Probab=99.46  E-value=7.8e-11  Score=98.70  Aligned_cols=254  Identities=15%  Similarity=0.087  Sum_probs=154.0

Q ss_pred             eEEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcce----
Q psy10867          6 EVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRI----   81 (343)
Q Consensus         6 ~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v----   81 (343)
                      ..++.++.+|.+..+|..+|+.+.+...... ....... .++.+++.. .++.+..||.++++.+.........+    
T Consensus       106 ~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~-~~~~p~v-~~~~v~v~~-~~g~l~a~d~~tG~~~W~~~~~~~~~~~~~  182 (377)
T TIGR03300       106 GLVFVGTEKGEVIALDAEDGKELWRAKLSSE-VLSPPLV-ANGLVVVRT-NDGRLTALDAATGERLWTYSRVTPALTLRG  182 (377)
T ss_pred             CEEEEEcCCCEEEEEECCCCcEeeeeccCce-eecCCEE-ECCEEEEEC-CCCeEEEEEcCCCceeeEEccCCCceeecC
Confidence            4566777789999999999999887665442 1111222 245555544 45999999999988764433221111    


Q ss_pred             -EEEEECCCCCEEEEecCCeEEEEEccCCceEEEecccC--C--C---eEEEEEec--CCCEEEEecCCCeEEEeecCcc
Q psy10867         82 -SSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHY--Q--P---ITIVKWSA--DSNFIVTGGEDGTICVWQLSRL  151 (343)
Q Consensus        82 -~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~~~~--~--~---v~~~~~~~--~~~~l~s~~~dg~i~iwd~~~~  151 (343)
                       ...... ++.+++...++.+..+|+++|+.+.......  +  .   ...+.-+|  .+..++.++.+|.+..+|..++
T Consensus       183 ~~sp~~~-~~~v~~~~~~g~v~ald~~tG~~~W~~~~~~~~g~~~~~~~~~~~~~p~~~~~~vy~~~~~g~l~a~d~~tG  261 (377)
T TIGR03300       183 SASPVIA-DGGVLVGFAGGKLVALDLQTGQPLWEQRVALPKGRTELERLVDVDGDPVVDGGQVYAVSYQGRVAALDLRSG  261 (377)
T ss_pred             CCCCEEE-CCEEEEECCCCEEEEEEccCCCEeeeeccccCCCCCchhhhhccCCccEEECCEEEEEEcCCEEEEEECCCC
Confidence             011111 3444445677899999999998765432110  0  0   00111111  3557788888999999999988


Q ss_pred             ceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCC-cE
Q psy10867        152 ICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDT-RL  229 (343)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~-~i  229 (343)
                      +......                       .. .......  .+  ..++.++.+|.+..+|..+++.+.... ... ..
T Consensus       262 ~~~W~~~-----------------------~~-~~~~p~~--~~--~~vyv~~~~G~l~~~d~~tG~~~W~~~~~~~~~~  313 (377)
T TIGR03300       262 RVLWKRD-----------------------AS-SYQGPAV--DD--NRLYVTDADGVVVALDRRSGSELWKNDELKYRQL  313 (377)
T ss_pred             cEEEeec-----------------------cC-CccCceE--eC--CEEEEECCCCeEEEEECCCCcEEEccccccCCcc
Confidence            6554321                       00 1111222  23  467778899999999999999887663 222 22


Q ss_pred             EEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEE-EEEEccCCCEEEEEeCCCcEEEE
Q psy10867        230 TCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVT-SLSCSITGITLLSSSADETLKIW  306 (343)
Q Consensus       230 ~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~s~~~~~l~s~~~dg~i~iw  306 (343)
                      .+...  .+..+++++.+|.++++|..+++....           +..+...+. +..+. + +.|+.++.||.|+.+
T Consensus       314 ssp~i--~g~~l~~~~~~G~l~~~d~~tG~~~~~-----------~~~~~~~~~~sp~~~-~-~~l~v~~~dG~l~~~  376 (377)
T TIGR03300       314 TAPAV--VGGYLVVGDFEGYLHWLSREDGSFVAR-----------LKTDGSGIASPPVVV-G-DGLLVQTRDGDLYAF  376 (377)
T ss_pred             ccCEE--ECCEEEEEeCCCEEEEEECCCCCEEEE-----------EEcCCCccccCCEEE-C-CEEEEEeCCceEEEe
Confidence            22222  367899999999999999887655332           222232222 22222 3 358888899988765

Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=99.45  E-value=4.6e-10  Score=104.25  Aligned_cols=246  Identities=12%  Similarity=0.049  Sum_probs=151.6

Q ss_pred             EEEecCCCCeEEEEecCCceEEEEEec--C------------CCCcceEEEEeCCce-EEEEEcCCCeEEEEeCCCcccc
Q psy10867          7 VAFSYDGSGAISVWEPKGGTLLMSYKG--A------------SVLSPHSMCLLGNDY-VLGVEKGKPMIQAWPVNSQEKA   71 (343)
Q Consensus         7 ~~~s~~~dg~i~iwd~~~~~~~~~~~~--~------------~~~~v~~~~~~~~~~-~~~~~~~~~~i~iw~~~~~~~~   71 (343)
                      +.++-.+.+.|+++|.. ++.+..+.+  .            -. ....+++.+++. ++++-..++.|+.+|..++...
T Consensus       582 lyVaDs~n~rI~v~d~~-G~~i~~ig~~g~~G~~dG~~~~a~f~-~P~GIavd~~gn~LYVaDt~n~~Ir~id~~~~~V~  659 (1057)
T PLN02919        582 LFISDSNHNRIVVTDLD-GNFIVQIGSTGEEGLRDGSFEDATFN-RPQGLAYNAKKNLLYVADTENHALREIDFVNETVR  659 (1057)
T ss_pred             EEEEECCCCeEEEEeCC-CCEEEEEccCCCcCCCCCchhccccC-CCcEEEEeCCCCEEEEEeCCCceEEEEecCCCEEE
Confidence            45555567889999974 554444432  1            12 468899998765 4454455578999998776532


Q ss_pred             eecc---------c-------CCcceEEEEECC-CCCEEEE-ecCCeEEEEEccCCceEEEecc---------------c
Q psy10867         72 QLRL---------I-------CPGRISSMQASP-DAAYIAV-SIETKLHMWQISSGRLLATASS---------------H  118 (343)
Q Consensus        72 ~~~~---------~-------~~~~v~~~~~s~-~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~---------------~  118 (343)
                      ....         +       .-..-..++|+| ++.++++ ..++.|++||..++... .+.+               .
T Consensus       660 tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~v~-~~~G~G~~~~~~g~~~~~~~  738 (1057)
T PLN02919        660 TLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAGQHQIWEYNISDGVTR-VFSGDGYERNLNGSSGTSTS  738 (1057)
T ss_pred             EEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECCCCeEEEEECCCCeEE-EEecCCccccCCCCcccccc
Confidence            2110         0       011246789999 4555555 56789999998776542 2211               1


Q ss_pred             CCCeEEEEEecCCC-EEEEecCCCeEEEeecCccceeeeeecCCCCCCCC--ccccccceeeeecccccceEEEEeecCC
Q psy10867        119 YQPITIVKWSADSN-FIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGK--GVTGLTEPLHVKSQHSLPVTHVTLSKLG  195 (343)
Q Consensus       119 ~~~v~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~  195 (343)
                      -.....++++|+++ ++++-+.++.|++||+.++....... ..+.....  ........ . ....-.....+++++++
T Consensus       739 ~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~g-g~~~~~~~l~~fG~~dG~-g-~~~~l~~P~Gvavd~dG  815 (1057)
T PLN02919        739 FAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAG-GDPTFSDNLFKFGDHDGV-G-SEVLLQHPLGVLCAKDG  815 (1057)
T ss_pred             ccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEe-cccccCcccccccCCCCc-h-hhhhccCCceeeEeCCC
Confidence            12346799999988 44555667899999998754321100 00000000  00000000 0 00111234588999998


Q ss_pred             CceEEEEeeCCCeEEEEecCCCceEEEeec--------------CCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccc
Q psy10867        196 AKSRVASVSHDRTCKIFDLCTGEDLLSLIL--------------DTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPR  260 (343)
Q Consensus       196 ~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~--------------~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~  260 (343)
                        .++++-+.++.|++||..++........              -.....++++++|+.+++-+.++.|++||+.+...
T Consensus       816 --~LYVADs~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt~Nn~Irvid~~~~~~  892 (1057)
T PLN02919        816 --QIYVADSYNHKIKKLDPATKRVTTLAGTGKAGFKDGKALKAQLSEPAGLALGENGRLFVADTNNSLIRYLDLNKGEA  892 (1057)
T ss_pred             --cEEEEECCCCEEEEEECCCCeEEEEeccCCcCCCCCcccccccCCceEEEEeCCCCEEEEECCCCEEEEEECCCCcc
Confidence              7888888999999999987765433221              12467899999999888888999999999987543

>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species

Probab=99.45  E-value=1.8e-09  Score=84.76  Aligned_cols=223  Identities=13%  Similarity=0.022  Sum_probs=148.4

Q ss_pred             EEEECC-CCCEEEEe-cCCeEEEEEccCCceEEEecccCCCeEEEEEe-cCCCEEEEecCCCeEEEeecCccceeeeeec
Q psy10867         83 SMQASP-DAAYIAVS-IETKLHMWQISSGRLLATASSHYQPITIVKWS-ADSNFIVTGGEDGTICVWQLSRLICKQTVAF  159 (343)
Q Consensus        83 ~~~~s~-~~~~l~~~-~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~  159 (343)
                      ++.|.+ ++.++.+. ..+.|+.|+..+++... +....  ...+++. +++. ++.+... .+.++|+.+++....   
T Consensus         4 gp~~d~~~g~l~~~D~~~~~i~~~~~~~~~~~~-~~~~~--~~G~~~~~~~g~-l~v~~~~-~~~~~d~~~g~~~~~---   75 (246)
T PF08450_consen    4 GPVWDPRDGRLYWVDIPGGRIYRVDPDTGEVEV-IDLPG--PNGMAFDRPDGR-LYVADSG-GIAVVDPDTGKVTVL---   75 (246)
T ss_dssp             EEEEETTTTEEEEEETTTTEEEEEETTTTEEEE-EESSS--EEEEEEECTTSE-EEEEETT-CEEEEETTTTEEEEE---
T ss_pred             ceEEECCCCEEEEEEcCCCEEEEEECCCCeEEE-EecCC--CceEEEEccCCE-EEEEEcC-ceEEEecCCCcEEEE---
Confidence            567887 67777774 57899999998775533 22222  6778887 5655 4444554 455568887643322   


Q ss_pred             CCCCCCCCccccccceeeee--cc-cccceEEEEeecCCCceEEEEeeCC--------CeEEEEecCCCceEEEeecCCc
Q psy10867        160 GIPGSSGKGVTGLTEPLHVK--SQ-HSLPVTHVTLSKLGAKSRVASVSHD--------RTCKIFDLCTGEDLLSLILDTR  228 (343)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~--~~-~~~~v~~~~~~~~~~~~~l~~~~~d--------~~i~~wd~~~~~~~~~~~~~~~  228 (343)
                                       ...  .. .....+.+++.|+|  ++.++....        |.+..++.. ++.......-..
T Consensus        76 -----------------~~~~~~~~~~~~~ND~~vd~~G--~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~~~~~~~~  135 (246)
T PF08450_consen   76 -----------------ADLPDGGVPFNRPNDVAVDPDG--NLYVTDSGGGGASGIDPGSVYRIDPD-GKVTVVADGLGF  135 (246)
T ss_dssp             -----------------EEEETTCSCTEEEEEEEE-TTS---EEEEEECCBCTTCGGSEEEEEEETT-SEEEEEEEEESS
T ss_pred             -----------------eeccCCCcccCCCceEEEcCCC--CEEEEecCCCccccccccceEEECCC-CeEEEEecCccc
Confidence                             221  12 45678899999999  666665443        567788876 555444445566


Q ss_pred             EEEEEEcCCCCEEEE-EcCCCcEEEEEeecccc-cccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEE
Q psy10867        229 LTCVAFDGTEDNIYM-GTSEGVIKSFCLRQVPR-TRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIW  306 (343)
Q Consensus       229 i~~~~~~~~~~~l~~-~~~d~~i~i~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw  306 (343)
                      .+.++|+|+++.|++ -+..+.|..+++..... ....     .....+....+..-.+++..+|++.++....+.|.++
T Consensus       136 pNGi~~s~dg~~lyv~ds~~~~i~~~~~~~~~~~~~~~-----~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~~~I~~~  210 (246)
T PF08450_consen  136 PNGIAFSPDGKTLYVADSFNGRIWRFDLDADGGELSNR-----RVFIDFPGGPGYPDGLAVDSDGNLWVADWGGGRIVVF  210 (246)
T ss_dssp             EEEEEEETTSSEEEEEETTTTEEEEEEEETTTCCEEEE-----EEEEE-SSSSCEEEEEEEBTTS-EEEEEETTTEEEEE
T ss_pred             ccceEECCcchheeecccccceeEEEeccccccceeee-----eeEEEcCCCCcCCCcceEcCCCCEEEEEcCCCEEEEE
Confidence            889999999998765 56788899999875332 1100     0011122222357889999999988888888999999


Q ss_pred             ecccceeeeecc-cCCceEEEEE-ccCCCeeeecc
Q psy10867        307 HTISRQCLRTIQ-HKGPVLGAFL-GLLPPAIHDYD  339 (343)
Q Consensus       307 d~~~~~~~~~~~-~~~~v~~~~~-sp~~~~l~~~~  339 (343)
                      +.+ |+.+..+. ....+++++| -|+.+.|+..+
T Consensus       211 ~p~-G~~~~~i~~p~~~~t~~~fgg~~~~~L~vTt  244 (246)
T PF08450_consen  211 DPD-GKLLREIELPVPRPTNCAFGGPDGKTLYVTT  244 (246)
T ss_dssp             ETT-SCEEEEEE-SSSSEEEEEEESTTSSEEEEEE
T ss_pred             CCC-ccEEEEEcCCCCCEEEEEEECCCCCEEEEEe
Confidence            976 99998888 5468999999 47777776554

These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....

>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]

Probab=99.43  E-value=1.3e-11  Score=93.51  Aligned_cols=278  Identities=14%  Similarity=0.133  Sum_probs=168.3

Q ss_pred             cceEEEEeCCceEEEEEcCCCeEEEEeCCCcc-c----ceecccCC------------cceEEEEECCCC---CEEEEec
Q psy10867         38 SPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQE-K----AQLRLICP------------GRISSMQASPDA---AYIAVSI   97 (343)
Q Consensus        38 ~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~-~----~~~~~~~~------------~~v~~~~~s~~~---~~l~~~~   97 (343)
                      .|+++.|...|.++++|...|.|.+|.-+... +    ...+..|.            ..|..+.|..++   .+|+++.
T Consensus        28 ~ItaVefd~tg~YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hFLlstN  107 (460)
T COG5170          28 KITAVEFDETGLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHFLLSTN  107 (460)
T ss_pred             eeeEEEeccccceEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceEEEecC
Confidence            78999999999999999988999999755432 1    11233332            458888887654   5788899


Q ss_pred             CCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceee
Q psy10867         98 ETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLH  177 (343)
Q Consensus        98 d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (343)
                      |.+|++|.+........-+  ..---++. +|-+.-+.+.   ..+++=.+......-.                ..+.+
T Consensus       108 dktiKlWKiyeknlk~va~--nnls~~~~-~~~~g~~~s~---~~l~lprls~hd~iia----------------a~p~r  165 (460)
T COG5170         108 DKTIKLWKIYEKNLKVVAE--NNLSDSFH-SPMGGPLTST---KELLLPRLSEHDEIIA----------------AKPCR  165 (460)
T ss_pred             Cceeeeeeeecccchhhhc--cccccccc-cccCCCcCCH---HHhhcccccccceEEE----------------eccce
Confidence            9999999987553321111  00000111 1111111110   1111111111000000                01222


Q ss_pred             ee-cccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee----c-----CCcEEEEEEcCCC-CEEEEEcC
Q psy10867        178 VK-SQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI----L-----DTRLTCVAFDGTE-DNIYMGTS  246 (343)
Q Consensus       178 ~~-~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~----~-----~~~i~~~~~~~~~-~~l~~~~~  246 (343)
                      .. ..|...|.++.+..+.  ..+++ +.|=.|.+|+++....-..+.    +     ..-|++..|+|.. ..+..++.
T Consensus       166 vyaNaH~yhiNSiS~NsD~--et~lS-aDdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsS  242 (460)
T COG5170         166 VYANAHPYHINSISFNSDK--ETLLS-ADDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSS  242 (460)
T ss_pred             eccccceeEeeeeeecCch--heeee-ccceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecC
Confidence            22 5688889999999987  45554 467789999987544322221    1     2348899999965 45666788


Q ss_pred             CCcEEEEEeecccc------cccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccc-eeeeecc-
Q psy10867        247 EGVIKSFCLRQVPR------TRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISR-QCLRTIQ-  318 (343)
Q Consensus       247 d~~i~i~d~~~~~~------~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~-~~~~~~~-  318 (343)
                      .|.|++-|++....      ..+. ...+....-+.+-...|..+.|+++|+++++-+.- +|++||+... .++.++. 
T Consensus       243 kG~Ikl~DlRq~alcdn~~klfe~-~~D~v~~~ff~eivsSISD~kFs~ngryIlsRdyl-tvkiwDvnm~k~pikTi~~  320 (460)
T COG5170         243 KGEIKLNDLRQSALCDNSKKLFEL-TIDGVDVDFFEEIVSSISDFKFSDNGRYILSRDYL-TVKIWDVNMAKNPIKTIPM  320 (460)
T ss_pred             CCcEEehhhhhhhhccCchhhhhh-ccCcccchhHHHHhhhhcceEEcCCCcEEEEeccc-eEEEEecccccCCceeech
Confidence            99999999984321      1000 01111122233344678889999999999988764 8999998753 4566653 


Q ss_pred             c------------CCce---EEEEEccCCCeeeecccCC
Q psy10867        319 H------------KGPV---LGAFLGLLPPAIHDYDFTP  342 (343)
Q Consensus       319 ~------------~~~v---~~~~~sp~~~~l~~~~~~~  342 (343)
                      |            ...|   ..+.||-|.+.+++++|..
T Consensus       321 h~~l~~~l~d~YEnDaifdkFeisfSgd~~~v~sgsy~N  359 (460)
T COG5170         321 HCDLMDELNDVYENDAIFDKFEISFSGDDKHVLSGSYSN  359 (460)
T ss_pred             HHHHHHHHHhhhhccceeeeEEEEecCCccccccccccc
Confidence            2            2333   3578999999999999864

>KOG3914|consensus

Probab=99.42  E-value=5.4e-12  Score=98.57  Aligned_cols=166  Identities=17%  Similarity=0.137  Sum_probs=116.5

Q ss_pred             eEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeee--ecccccceEEEEeecCCCceE
Q psy10867        122 ITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHV--KSQHSLPVTHVTLSKLGAKSR  199 (343)
Q Consensus       122 v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~  199 (343)
                      ...+..++.+++++.+..+....+++........                  +....  .......+..+..+...  ..
T Consensus        65 ~~~~~~s~~~~llAv~~~~K~~~~f~~~~~~~~~------------------kl~~~~~v~~~~~ai~~~~~~~sv--~v  124 (390)
T KOG3914|consen   65 PALVLTSDSGRLVAVATSSKQRAVFDYRENPKGA------------------KLLDVSCVPKRPTAISFIREDTSV--LV  124 (390)
T ss_pred             ccccccCCCceEEEEEeCCCceEEEEEecCCCcc------------------eeeeEeecccCcceeeeeeccceE--EE
Confidence            3445567788888888888887777776543211                  11111  11222333333333332  23


Q ss_pred             EEEeeCCCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCcccccc
Q psy10867        200 VASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHE  279 (343)
Q Consensus       200 l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~  279 (343)
                      ...++....+.+|....+.....+.|-+.+..++++||+++++++..|..|++-.+........          -.-||+
T Consensus       125 ~dkagD~~~~di~s~~~~~~~~~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~Ies----------fclGH~  194 (390)
T KOG3914|consen  125 ADKAGDVYSFDILSADSGRCEPILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIES----------FCLGHK  194 (390)
T ss_pred             EeecCCceeeeeecccccCcchhhhhhhhhheeeecCCCCEEEEecCCceEEEEecCcccchhh----------hccccH
Confidence            3345556677777777677777778899999999999999999999999999987665333221          245799


Q ss_pred             CcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc
Q psy10867        280 KQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ  318 (343)
Q Consensus       280 ~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~  318 (343)
                      .-|..++.-++ ..|+++|.|++|++||+.+|+++.++.
T Consensus       195 eFVS~isl~~~-~~LlS~sGD~tlr~Wd~~sgk~L~t~d  232 (390)
T KOG3914|consen  195 EFVSTISLTDN-YLLLSGSGDKTLRLWDITSGKLLDTCD  232 (390)
T ss_pred             hheeeeeeccC-ceeeecCCCCcEEEEecccCCcccccc
Confidence            99999998755 568999999999999999999988765

>KOG2041|consensus

Probab=99.42  E-value=4.9e-12  Score=106.11  Aligned_cols=241  Identities=11%  Similarity=0.134  Sum_probs=172.4

Q ss_pred             cCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCCc---------------eEEEecccCCCeEEEEEecCCCEEEEecC
Q psy10867         76 ICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGR---------------LLATASSHYQPITIVKWSADSNFIVTGGE  139 (343)
Q Consensus        76 ~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~---------------~~~~~~~~~~~v~~~~~~~~~~~l~s~~~  139 (343)
                      +......+++|+....++|+ |.||.+++..+.+..               .-+++.+|.+.|.-+.|+.+.+.|-+...
T Consensus        12 PnnvkL~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTtSDt   91 (1189)
T KOG2041|consen   12 PNNVKLHCAEWNKESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLTTSDT   91 (1189)
T ss_pred             CCCceEEEEEEcccCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccccccccccCC
Confidence            44567899999999999998 789999999876531               12467899999999999999899999999


Q ss_pred             CCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCce
Q psy10867        140 DGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGED  219 (343)
Q Consensus       140 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~  219 (343)
                      +|-|.+|-+-.+.-..                    ...-...+..|.+++|..+|  ..+.....||.|.+=.++.. .
T Consensus        92 ~GlIiVWmlykgsW~E--------------------EMiNnRnKSvV~SmsWn~dG--~kIcIvYeDGavIVGsvdGN-R  148 (1189)
T KOG2041|consen   92 SGLIIVWMLYKGSWCE--------------------EMINNRNKSVVVSMSWNLDG--TKICIVYEDGAVIVGSVDGN-R  148 (1189)
T ss_pred             CceEEEEeeecccHHH--------------------HHhhCcCccEEEEEEEcCCC--cEEEEEEccCCEEEEeeccc-e
Confidence            9999999987763221                    12223456779999999999  78999999999887765433 2


Q ss_pred             EEEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccc-cc-cCCCCCCccccccCcEEEEEE--------c
Q psy10867        220 LLSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDH-HI-QDSTSNPDFIGHEKQVTSLSC--------S  288 (343)
Q Consensus       220 ~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~-~~-~~~~~~~~~~~~~~~v~~~~~--------s  288 (343)
                      +..-. .......+.|++|.+.++.+-.+|.+.++|.+..-..+.. .- .+..-..+  .....|-.+.|        -
T Consensus       149 IwgKeLkg~~l~hv~ws~D~~~~Lf~~ange~hlydnqgnF~~Kl~~~c~Vn~tg~~s--~~~~kia~i~w~~g~~~~v~  226 (1189)
T KOG2041|consen  149 IWGKELKGQLLAHVLWSEDLEQALFKKANGETHLYDNQGNFERKLEKDCEVNGTGIFS--NFPTKIAEIEWNTGPYQPVP  226 (1189)
T ss_pred             ecchhcchheccceeecccHHHHHhhhcCCcEEEecccccHHHhhhhceEEeeeeeec--CCCccccceeeccCccccCC
Confidence            22222 2233567899999999999999999999998653211100 00 00000111  11112334444        3


Q ss_pred             cCCCEEEEEeCCCcEEEEecccceeeeecccCCceEEEEEccCCCeeeecccC
Q psy10867        289 ITGITLLSSSADETLKIWHTISRQCLRTIQHKGPVLGAFLGLLPPAIHDYDFT  341 (343)
Q Consensus       289 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~  341 (343)
                      ||...|+.+-.+|.+.+..-.+...-..+...-.+....|+++|..|++++..
T Consensus       227 pdrP~lavcy~nGr~QiMR~eND~~Pvv~dtgm~~vgakWnh~G~vLAvcG~~  279 (1189)
T KOG2041|consen  227 PDRPRLAVCYANGRMQIMRSENDPEPVVVDTGMKIVGAKWNHNGAVLAVCGND  279 (1189)
T ss_pred             CCCCEEEEEEcCceehhhhhcCCCCCeEEecccEeecceecCCCcEEEEccCc
Confidence            57889999999999999876665555555556778999999999999998764

>KOG0309|consensus

Probab=99.42  E-value=6.9e-12  Score=105.47  Aligned_cols=284  Identities=16%  Similarity=0.222  Sum_probs=193.7

Q ss_pred             ccceEEEecCCCC-------eEEEEecCC-ceEEEEEecCCCCcceEEEEeCCc---eEEEEEcCCCeEEEEeCCCc--c
Q psy10867          3 LLNEVAFSYDGSG-------AISVWEPKG-GTLLMSYKGASVLSPHSMCLLGND---YVLGVEKGKPMIQAWPVNSQ--E   69 (343)
Q Consensus         3 ~v~~~~~s~~~dg-------~i~iwd~~~-~~~~~~~~~~~~~~v~~~~~~~~~---~~~~~~~~~~~i~iw~~~~~--~   69 (343)
                      +++++.+++.|+.       .+.+-|+.. +.+.+-+..-....|-.+.|+|..   ..+++.+. ..-.+|++...  +
T Consensus        26 ~~~a~si~p~grdi~lAsr~gl~i~dld~p~~ppr~l~h~tpw~vad~qws~h~a~~~wiVsts~-qkaiiwnlA~ss~~  104 (1081)
T KOG0309|consen   26 GFNAVSINPSGRDIVLASRQGLYIIDLDDPFTPPRWLHHITPWQVADVQWSPHPAKPYWIVSTSN-QKAIIWNLAKSSSN  104 (1081)
T ss_pred             cccceeeccccchhhhhhhcCeEEEeccCCCCCceeeeccCcchhcceecccCCCCceeEEecCc-chhhhhhhhcCCcc
Confidence            4667778888752       345666653 344433433333367788888743   45555444 67788987532  2


Q ss_pred             cc-eecccCCcceEEEEECCCCC-EEEE-ecCCeEEEEEccCCc-eEEEecccCCCeEEEEEecCCCEEEEecCCCeEEE
Q psy10867         70 KA-QLRLICPGRISSMQASPDAA-YIAV-SIETKLHMWQISSGR-LLATASSHYQPITIVKWSADSNFIVTGGEDGTICV  145 (343)
Q Consensus        70 ~~-~~~~~~~~~v~~~~~s~~~~-~l~~-~~d~~i~v~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~i  145 (343)
                      .+ ..+.+|...|+.+.|.|... .+++ +-|..+..||+++.. ++.....-......++|+.....+.+.+..+.|.+
T Consensus       105 aIef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~ys~~~w~s~asqVkwnyk~p~vlasshg~~i~v  184 (1081)
T KOG0309|consen  105 AIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYSTSSWRSAASQVKWNYKDPNVLASSHGNDIFV  184 (1081)
T ss_pred             ceEEEEecCccceeccccCCCCCcceeeccccccceeeeccCCCcceeeeecccccCceeeecccCcchhhhccCCceEE
Confidence            23 45668999999999999764 5555 578999999998763 44455444456678999875445555566788999


Q ss_pred             eecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCce--EEEe
Q psy10867        146 WQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGED--LLSL  223 (343)
Q Consensus       146 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~--~~~~  223 (343)
                      ||++.+.                     .++..+++|...|+.+.|..... ..+.+.+.|+++++||......  ....
T Consensus       185 wd~r~gs---------------------~pl~s~K~~vs~vn~~~fnr~~~-s~~~s~~~d~tvkfw~y~kSt~e~~~~v  242 (1081)
T KOG0309|consen  185 WDLRKGS---------------------TPLCSLKGHVSSVNSIDFNRFKY-SEIMSSSNDGTVKFWDYSKSTTESKRTV  242 (1081)
T ss_pred             EeccCCC---------------------cceEEecccceeeehHHHhhhhh-hhhcccCCCCceeeecccccccccceec
Confidence            9999874                     37788888999999999986543 5788999999999999875433  3344


Q ss_pred             ecCCcEEEEEEcCCCCEEEE--EcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCC----------
Q psy10867        224 ILDTRLTCVAFDGTEDNIYM--GTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITG----------  291 (343)
Q Consensus       224 ~~~~~i~~~~~~~~~~~l~~--~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~----------  291 (343)
                      ....++..-++.|-|+-.++  .-.+..+.+++.++...... .....+++..+.||.+.|....|-..+          
T Consensus       243 tt~~piw~~r~~Pfg~g~~~mp~~G~n~v~~~~c~n~d~e~n-~~~~~~pVh~F~GH~D~V~eFlWR~r~e~~~d~d~rd  321 (1081)
T KOG0309|consen  243 TTNFPIWRGRYLPFGEGYCIMPMVGGNMVPQLRCENSDLEWN-VFDLNTPVHTFVGHDDVVLEFLWRKRKECDGDYDSRD  321 (1081)
T ss_pred             cccCcceeccccccCceeEeccccCCeeeeeccccchhhhhc-cccCCcceeeecCcchHHHHHhhhhcccccCCCCccc
Confidence            46778888888886654333  22233566666554332211 122356688999999988776664321          


Q ss_pred             CEEEEEeCCCcEEEEeccc
Q psy10867        292 ITLLSSSADETLKIWHTIS  310 (343)
Q Consensus       292 ~~l~s~~~dg~i~iwd~~~  310 (343)
                      -.|++-+.|..+++|-+.+
T Consensus       322 fQLVTWSkD~~lrlWpI~~  340 (1081)
T KOG0309|consen  322 FQLVTWSKDQTLRLWPIDS  340 (1081)
T ss_pred             eeEEEeecCCceEeeeccH
Confidence            2799999999999998754

>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation []

Probab=99.42  E-value=3.5e-09  Score=96.78  Aligned_cols=298  Identities=13%  Similarity=0.099  Sum_probs=181.3

Q ss_pred             CCeEEEE----ecCCc--eEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCC---------------C-----
Q psy10867         14 SGAISVW----EPKGG--TLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVN---------------S-----   67 (343)
Q Consensus        14 dg~i~iw----d~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~---------------~-----   67 (343)
                      +|.|.+.    +..+.  +.+..+.   . .|.+++||||+.+++....++++.+-.-.               .     
T Consensus        96 ~Gdi~~~~~~~~~~~~~~E~VG~vd---~-GI~a~~WSPD~Ella~vT~~~~l~~mt~~fd~i~E~~l~~~~~~~~~~Vs  171 (928)
T PF04762_consen   96 SGDIILVREDPDPDEDEIEIVGSVD---S-GILAASWSPDEELLALVTGEGNLLLMTRDFDPISEVPLDSDDFGESKHVS  171 (928)
T ss_pred             CceEEEEEccCCCCCceeEEEEEEc---C-cEEEEEECCCcCEEEEEeCCCEEEEEeccceEEEEeecCccccCCCceee
Confidence            4667777    44332  2223222   3 89999999999998888877777664311               0     


Q ss_pred             ---cccceecc------------------------cCCcceEEEEECCCCCEEEEe----cC---CeEEEEEccCCceEE
Q psy10867         68 ---QEKAQLRL------------------------ICPGRISSMQASPDAAYIAVS----IE---TKLHMWQISSGRLLA  113 (343)
Q Consensus        68 ---~~~~~~~~------------------------~~~~~v~~~~~s~~~~~l~~~----~d---~~i~v~~~~~~~~~~  113 (343)
                         |+....+.                        ...+.-..++|-.||+++|++    ..   ..++||+- .|.+..
T Consensus       172 VGWGkKeTQF~Gs~gK~aa~~~~~p~~~~~d~~~~s~dd~~~~ISWRGDG~yFAVss~~~~~~~~R~iRVy~R-eG~L~s  250 (928)
T PF04762_consen  172 VGWGKKETQFHGSAGKAAARQLRDPTVPKVDEGKLSWDDGRVRISWRGDGEYFAVSSVEPETGSRRVIRVYSR-EGELQS  250 (928)
T ss_pred             eccCcccCccCcchhhhhhhhccCCCCCccccCccccCCCceEEEECCCCcEEEEEEEEcCCCceeEEEEECC-CceEEe
Confidence               00000000                        022244578899999999973    22   47999995 476655


Q ss_pred             EecccCCCeEEEEEecCCCEEEEecC---CCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEE
Q psy10867        114 TASSHYQPITIVKWSADSNFIVTGGE---DGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVT  190 (343)
Q Consensus       114 ~~~~~~~~v~~~~~~~~~~~l~s~~~---dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  190 (343)
                      +-+.-.+--.+++|.|.|++|++...   ...|.+|.-+..+.. .+                  ...+......|..+.
T Consensus       251 tSE~v~gLe~~l~WrPsG~lIA~~q~~~~~~~VvFfErNGLrhg-eF------------------~l~~~~~~~~v~~l~  311 (928)
T PF04762_consen  251 TSEPVDGLEGALSWRPSGNLIASSQRLPDRHDVVFFERNGLRHG-EF------------------TLRFDPEEEKVIELA  311 (928)
T ss_pred             ccccCCCccCCccCCCCCCEEEEEEEcCCCcEEEEEecCCcEee-eE------------------ecCCCCCCceeeEEE
Confidence            55444444457899999999998764   345677765543221 11                  111124566789999


Q ss_pred             eecCCCceEEEEeeCCCeEEEEecCCCceEE--Eee--cCCcEEEEEEcCCC-CEEEEEcCCCcEEEEEeeccccccc--
Q psy10867        191 LSKLGAKSRVASVSHDRTCKIFDLCTGEDLL--SLI--LDTRLTCVAFDGTE-DNIYMGTSEGVIKSFCLRQVPRTRD--  263 (343)
Q Consensus       191 ~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~--~~~--~~~~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~--  263 (343)
                      |++++  ..|+....|. |.+|-..+..-..  .+.  ....+..+.|+|.. ..|.+.+.+|.+..+++.-.-....  
T Consensus       312 Wn~ds--~iLAv~~~~~-vqLWt~~NYHWYLKqei~~~~~~~~~~~~Wdpe~p~~L~v~t~~g~~~~~~~~~~v~~s~~~  388 (928)
T PF04762_consen  312 WNSDS--EILAVWLEDR-VQLWTRSNYHWYLKQEIRFSSSESVNFVKWDPEKPLRLHVLTSNGQYEIYDFAWDVSRSPGS  388 (928)
T ss_pred             ECCCC--CEEEEEecCC-ceEEEeeCCEEEEEEEEEccCCCCCCceEECCCCCCEEEEEecCCcEEEEEEEEEEEecCCC
Confidence            99999  7888876555 9999877665322  222  23445669999964 4577777778776655432111000  


Q ss_pred             -------cc----------------ccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceee------
Q psy10867        264 -------HH----------------IQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCL------  314 (343)
Q Consensus       264 -------~~----------------~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~------  314 (343)
                             ..                ++..-+...+ .-..+|.+++|++++..+++-..||.|.+|........      
T Consensus       389 ~~~D~g~vaVIDG~~lllTpf~~a~VPPPMs~~~l-~~~~~v~~vaf~~~~~~~avl~~d~~l~~~~~~~~~~~~~~~~~  467 (928)
T PF04762_consen  389 SPNDNGTVAVIDGNKLLLTPFRRAVVPPPMSSYEL-ELPSPVNDVAFSPSNSRFAVLTSDGSLSIYEWDLKNMWSVKPPK  467 (928)
T ss_pred             CccCceEEEEEeCCeEEEecccccCCCchHhceEE-cCCCCcEEEEEeCCCCeEEEEECCCCEEEEEecCCCcccccCcc
Confidence                   00                0000011111 13467999999999988999999999999985432111      


Q ss_pred             --eec----------c-cCCceEEEEEccCCCeeeecc
Q psy10867        315 --RTI----------Q-HKGPVLGAFLGLLPPAIHDYD  339 (343)
Q Consensus       315 --~~~----------~-~~~~v~~~~~sp~~~~l~~~~  339 (343)
                        ..+          . ....+..+.|..+...++..+
T Consensus       468 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  505 (928)
T PF04762_consen  468 LLSSISLDSMDISDSELPLGSLRQLAWLNDDTLLVLSD  505 (928)
T ss_pred             hhhhcccccccccccccccccEEEEEEeCCCEEEEEEe
Confidence              111          1 234567888887776665544

>PRK04043 tolB translocation protein TolB; Provisional

Probab=99.39  E-value=3.5e-10  Score=94.80  Aligned_cols=200  Identities=13%  Similarity=-0.017  Sum_probs=123.4

Q ss_pred             CeEEEEEccCCceEEEecccCCCeEEEEEecCCCE-EEEecC---CCeEEEeecCccceeeeeecCCCCCCCCccccccc
Q psy10867         99 TKLHMWQISSGRLLATASSHYQPITIVKWSADSNF-IVTGGE---DGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTE  174 (343)
Q Consensus        99 ~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~s~~~---dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (343)
                      ..|.+-|.+... .+.+... +......|+|||+. ++..+.   +..|.++|+.+++.                     
T Consensus       169 ~~l~~~d~dg~~-~~~~~~~-~~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~---------------------  225 (419)
T PRK04043        169 SNIVLADYTLTY-QKVIVKG-GLNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKK---------------------  225 (419)
T ss_pred             ceEEEECCCCCc-eeEEccC-CCeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcE---------------------
Confidence            367776764333 3334333 37788999999984 554433   35688899887632                     


Q ss_pred             eeeeecccccceEEEEeecCCCceEEEEeeCC--CeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcC-CC--c
Q psy10867        175 PLHVKSQHSLPVTHVTLSKLGAKSRVASVSHD--RTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTS-EG--V  249 (343)
Q Consensus       175 ~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d--~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d~--~  249 (343)
                        ..+....+......|+|++. .++++.+.+  ..|.++|+.+++...............|+|||+.|+..+. .+  .
T Consensus       226 --~~lt~~~g~~~~~~~SPDG~-~la~~~~~~g~~~Iy~~dl~~g~~~~LT~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~  302 (419)
T PRK04043        226 --EKIASSQGMLVVSDVSKDGS-KLLLTMAPKGQPDIYLYDTNTKTLTQITNYPGIDVNGNFVEDDKRIVFVSDRLGYPN  302 (419)
T ss_pred             --EEEecCCCcEEeeEECCCCC-EEEEEEccCCCcEEEEEECCCCcEEEcccCCCccCccEECCCCCEEEEEECCCCCce
Confidence              22222444556778999994 344444434  5688889877764433233333445689999998777653 33  5


Q ss_pred             EEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCC---------CcEEEEecccceeeeecccC
Q psy10867        250 IKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSAD---------ETLKIWHTISRQCLRTIQHK  320 (343)
Q Consensus       250 i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d---------g~i~iwd~~~~~~~~~~~~~  320 (343)
                      |++.|+......+.          ...+.  .  ...|+|||++|+..+..         ..|.+.|+.+++. ..+...
T Consensus       303 Iy~~dl~~g~~~rl----------t~~g~--~--~~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~~-~~LT~~  367 (419)
T PRK04043        303 IFMKKLNSGSVEQV----------VFHGK--N--NSSVSTYKNYIVYSSRETNNEFGKNTFNLYLISTNSDYI-RRLTAN  367 (419)
T ss_pred             EEEEECCCCCeEeC----------ccCCC--c--CceECCCCCEEEEEEcCCCcccCCCCcEEEEEECCCCCe-EECCCC
Confidence            77777765433111          11111  1  24899999988865543         3688889887764 334422


Q ss_pred             CceEEEEEccCCCeeeecc
Q psy10867        321 GPVLGAFLGLLPPAIHDYD  339 (343)
Q Consensus       321 ~~v~~~~~sp~~~~l~~~~  339 (343)
                      +......|+|||+.|+...
T Consensus       368 ~~~~~p~~SPDG~~I~f~~  386 (419)
T PRK04043        368 GVNQFPRFSSDGGSIMFIK  386 (419)
T ss_pred             CCcCCeEECCCCCEEEEEE
Confidence            3344689999999887654

>PRK11138 outer membrane biogenesis protein BamB; Provisional

Probab=99.38  E-value=2.2e-09  Score=90.37  Aligned_cols=278  Identities=13%  Similarity=0.096  Sum_probs=167.2

Q ss_pred             eEEEecCCCCeEEEEecCCceEEEEEecCCCCcc----------eEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecc
Q psy10867          6 EVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSP----------HSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRL   75 (343)
Q Consensus         6 ~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v----------~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~   75 (343)
                      ..+|..+.+|.|.-+|..+|+.+.+.+.......          ..+.. .++.+++.+ .+|.+.-+|.++++.+....
T Consensus        70 ~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~v~v~~-~~g~l~ald~~tG~~~W~~~  147 (394)
T PRK11138         70 NKVYAADRAGLVKALDADTGKEIWSVDLSEKDGWFSKNKSALLSGGVTV-AGGKVYIGS-EKGQVYALNAEDGEVAWQTK  147 (394)
T ss_pred             CEEEEECCCCeEEEEECCCCcEeeEEcCCCcccccccccccccccccEE-ECCEEEEEc-CCCEEEEEECCCCCCccccc
Confidence            4567777889999999999999887664331000          11122 244555544 45899999999998874443


Q ss_pred             cCCcceEE-EEECCCCCEEEEecCCeEEEEEccCCceEEEecccCCCeEE-EEEec--CCCEEEEecCCCeEEEeecCcc
Q psy10867         76 ICPGRISS-MQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPITI-VKWSA--DSNFIVTGGEDGTICVWQLSRL  151 (343)
Q Consensus        76 ~~~~~v~~-~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~~~~~~v~~-~~~~~--~~~~l~s~~~dg~i~iwd~~~~  151 (343)
                      .. +.+.+ ... .++.+++...++.+..+|.++|+.+............ ..-+|  .+..++.++.+|.+..+|..++
T Consensus       148 ~~-~~~~ssP~v-~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~sP~v~~~~v~~~~~~g~v~a~d~~~G  225 (394)
T PRK11138        148 VA-GEALSRPVV-SDGLVLVHTSNGMLQALNESDGAVKWTVNLDVPSLTLRGESAPATAFGGAIVGGDNGRVSAVLMEQG  225 (394)
T ss_pred             CC-CceecCCEE-ECCEEEEECCCCEEEEEEccCCCEeeeecCCCCcccccCCCCCEEECCEEEEEcCCCEEEEEEccCC
Confidence            22 22221 111 1566666677899999999999988776532111000 00112  2345677788899999999988


Q ss_pred             ceeeeeecCCCCCCCCccccccceeeeec-ccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCCcEE
Q psy10867        152 ICKQTVAFGIPGSSGKGVTGLTEPLHVKS-QHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLT  230 (343)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~  230 (343)
                      +.........+...        .....+. ....++    +. +   ..++.++.+|.+..+|..+|+.+.+...... .
T Consensus       226 ~~~W~~~~~~~~~~--------~~~~~~~~~~~sP~----v~-~---~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~-~  288 (394)
T PRK11138        226 QLIWQQRISQPTGA--------TEIDRLVDVDTTPV----VV-G---GVVYALAYNGNLVALDLRSGQIVWKREYGSV-N  288 (394)
T ss_pred             hhhheeccccCCCc--------cchhcccccCCCcE----EE-C---CEEEEEEcCCeEEEEECCCCCEEEeecCCCc-c
Confidence            76654432111000        0000000 001111    11 2   3566777899999999999998877654322 1


Q ss_pred             EEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEeccc
Q psy10867        231 CVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTIS  310 (343)
Q Consensus       231 ~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~  310 (343)
                      .+.  ..+..+++++.+|.+..+|..+++......        ... + ....+...  .+.+|+.++.||.|...|..+
T Consensus       289 ~~~--~~~~~vy~~~~~g~l~ald~~tG~~~W~~~--------~~~-~-~~~~sp~v--~~g~l~v~~~~G~l~~ld~~t  354 (394)
T PRK11138        289 DFA--VDGGRIYLVDQNDRVYALDTRGGVELWSQS--------DLL-H-RLLTAPVL--YNGYLVVGDSEGYLHWINRED  354 (394)
T ss_pred             CcE--EECCEEEEEcCCCeEEEEECCCCcEEEccc--------ccC-C-CcccCCEE--ECCEEEEEeCCCEEEEEECCC
Confidence            122  246788888899999999998765432211        000 0 11111222  245788889999999999999


Q ss_pred             ceeeeecc
Q psy10867        311 RQCLRTIQ  318 (343)
Q Consensus       311 ~~~~~~~~  318 (343)
                      |+.+...+
T Consensus       355 G~~~~~~~  362 (394)
T PRK11138        355 GRFVAQQK  362 (394)
T ss_pred             CCEEEEEE
Confidence            99988876

>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species

Probab=99.38  E-value=1.7e-08  Score=79.22  Aligned_cols=214  Identities=14%  Similarity=0.102  Sum_probs=142.0

Q ss_pred             ceEEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEe-CCceEEEEEcCCCeEEEEeCCCcccceeccc-----CC
Q psy10867          5 NEVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLL-GNDYVLGVEKGKPMIQAWPVNSQEKAQLRLI-----CP   78 (343)
Q Consensus         5 ~~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~-----~~   78 (343)
                      ..+.|+--..+.|..|+..+++... +...   ....+++. +++.++++...  .+.++|..+++.......     ..
T Consensus        12 g~l~~~D~~~~~i~~~~~~~~~~~~-~~~~---~~~G~~~~~~~g~l~v~~~~--~~~~~d~~~g~~~~~~~~~~~~~~~   85 (246)
T PF08450_consen   12 GRLYWVDIPGGRIYRVDPDTGEVEV-IDLP---GPNGMAFDRPDGRLYVADSG--GIAVVDPDTGKVTVLADLPDGGVPF   85 (246)
T ss_dssp             TEEEEEETTTTEEEEEETTTTEEEE-EESS---SEEEEEEECTTSEEEEEETT--CEEEEETTTTEEEEEEEEETTCSCT
T ss_pred             CEEEEEEcCCCEEEEEECCCCeEEE-EecC---CCceEEEEccCCEEEEEEcC--ceEEEecCCCcEEEEeeccCCCccc
Confidence            3455555557888888887765433 3322   35777888 78888887765  456669888765533322     34


Q ss_pred             cceEEEEECCCCCEEEEecC---------CeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEE-EecCCCeEEEeec
Q psy10867         79 GRISSMQASPDAAYIAVSIE---------TKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIV-TGGEDGTICVWQL  148 (343)
Q Consensus        79 ~~v~~~~~s~~~~~l~~~~d---------~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-s~~~dg~i~iwd~  148 (343)
                      ...+.+++.|+|++.++...         +.|..++.. ++..... ..-.....|+|+|+++.|+ +-+..+.|..+++
T Consensus        86 ~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~~~-~~~~~pNGi~~s~dg~~lyv~ds~~~~i~~~~~  163 (246)
T PF08450_consen   86 NRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-GKVTVVA-DGLGFPNGIAFSPDGKTLYVADSFNGRIWRFDL  163 (246)
T ss_dssp             EEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-SEEEEEE-EEESSEEEEEEETTSSEEEEEETTTTEEEEEEE
T ss_pred             CCCceEEEcCCCCEEEEecCCCccccccccceEEECCC-CeEEEEe-cCcccccceEECCcchheeecccccceeEEEec
Confidence            57889999999998887321         457777766 4443333 3345678999999998665 5667888999998


Q ss_pred             Cccce-eeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecC-
Q psy10867        149 SRLIC-KQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILD-  226 (343)
Q Consensus       149 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~-  226 (343)
                      ..... ....                +....+.......-.+++..+|  ++.++....+.|.++|.+ |+.+..+..+ 
T Consensus       164 ~~~~~~~~~~----------------~~~~~~~~~~g~pDG~~vD~~G--~l~va~~~~~~I~~~~p~-G~~~~~i~~p~  224 (246)
T PF08450_consen  164 DADGGELSNR----------------RVFIDFPGGPGYPDGLAVDSDG--NLWVADWGGGRIVVFDPD-GKLLREIELPV  224 (246)
T ss_dssp             ETTTCCEEEE----------------EEEEE-SSSSCEEEEEEEBTTS---EEEEEETTTEEEEEETT-SCEEEEEE-SS
T ss_pred             cccccceeee----------------eeEEEcCCCCcCCCcceEcCCC--CEEEEEcCCCEEEEECCC-ccEEEEEcCCC
Confidence            64322 1110                0222222233457889999998  788777788999999976 9988888865 


Q ss_pred             CcEEEEEE-cCCCCEEEEEc
Q psy10867        227 TRLTCVAF-DGTEDNIYMGT  245 (343)
Q Consensus       227 ~~i~~~~~-~~~~~~l~~~~  245 (343)
                      ..+++++| -++.+.|++.+
T Consensus       225 ~~~t~~~fgg~~~~~L~vTt  244 (246)
T PF08450_consen  225 PRPTNCAFGGPDGKTLYVTT  244 (246)
T ss_dssp             SSEEEEEEESTTSSEEEEEE
T ss_pred             CCEEEEEEECCCCCEEEEEe
Confidence            68999999 46767776644

These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....

>KOG4532|consensus

Probab=99.37  E-value=5.9e-10  Score=82.92  Aligned_cols=219  Identities=9%  Similarity=0.031  Sum_probs=142.0

Q ss_pred             EEEecCCCCeEEEEecCCceEE-EEEecCCCCcceE---EEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceE
Q psy10867          7 VAFSYDGSGAISVWEPKGGTLL-MSYKGASVLSPHS---MCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRIS   82 (343)
Q Consensus         7 ~~~s~~~dg~i~iwd~~~~~~~-~~~~~~~~~~v~~---~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~   82 (343)
                      .++.++..|.+.+|...+.+.. +.-..+.. .|.-   .+-+. -.++. ++.|.++++.+++.+..........-.+.
T Consensus        86 ~la~gG~~g~fd~~~~~tn~~h~~~cd~snn-~v~~~~r~cd~~-~~~~i-~sndht~k~~~~~~~s~~~~~h~~~~~~n  162 (344)
T KOG4532|consen   86 TLADGGASGQFDLFACNTNDGHLYQCDVSNN-DVTLVKRYCDLK-FPLNI-ASNDHTGKTMVVSGDSNKFAVHNQNLTQN  162 (344)
T ss_pred             EEEeccccceeeeecccCcccceeeeccccc-chhhhhhhcccc-cceee-ccCCcceeEEEEecCcccceeecccccee
Confidence            3445556789999998765432 22233332 2221   11111 12333 34447788887765543322222223388


Q ss_pred             EEEECCCCCEEEE-ecCCeEEEEEccCCc-eE-E-EecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeee
Q psy10867         83 SMQASPDAAYIAV-SIETKLHMWQISSGR-LL-A-TASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVA  158 (343)
Q Consensus        83 ~~~~s~~~~~l~~-~~d~~i~v~~~~~~~-~~-~-~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~  158 (343)
                      ++++++|++++++ +....|..|.+.... .+ . ......+.-.+..|+.....+|++..||++.|||++........ 
T Consensus       163 s~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~tpm~~-  241 (344)
T KOG4532|consen  163 SLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGFYNSFSENDLQFAVVFQDGTCAIYDVRNMATPMAE-  241 (344)
T ss_pred             eeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEecccCCCceeeeeccCcceEEEEecCCcEEEEEecccccchhh-
Confidence            9999999999997 777899999987542 22 2 22233445578899999999999999999999999986433221 


Q ss_pred             cCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeec--------CC-cE
Q psy10867        159 FGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLIL--------DT-RL  229 (343)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~--------~~-~i  229 (343)
                                      .......|.+.+..+.|++.|.-.+|+..-.-+.+.+.|+++++..+.+..        .. .+
T Consensus       242 ----------------~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~~~~~q~I~i~~d~~~~~~tq~i  305 (344)
T KOG4532|consen  242 ----------------ISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTRNYVNHQVIVIPDDVERKHNTQHI  305 (344)
T ss_pred             ----------------hcccCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEcccCceeeEEecCcccccccccccc
Confidence                            223334589999999999887656777777789999999999887655542        11 25


Q ss_pred             EEEEEcCCCCEEEEEc
Q psy10867        230 TCVAFDGTEDNIYMGT  245 (343)
Q Consensus       230 ~~~~~~~~~~~l~~~~  245 (343)
                      ....|+.++..+.+.+
T Consensus       306 fgt~f~~~n~s~~v~~  321 (344)
T KOG4532|consen  306 FGTNFNNENESNDVKN  321 (344)
T ss_pred             ccccccCCCccccccc
Confidence            5666666666555544

>KOG4190|consensus

Probab=99.36  E-value=4.7e-12  Score=103.29  Aligned_cols=278  Identities=12%  Similarity=0.151  Sum_probs=175.7

Q ss_pred             EEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCc-------ccceecccCCcceEEEEECCCCCEEEEecCC
Q psy10867         27 LLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQ-------EKAQLRLICPGRISSMQASPDAAYIAVSIET   99 (343)
Q Consensus        27 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~-------~~~~~~~~~~~~v~~~~~s~~~~~l~~~~d~   99 (343)
                      .+..+.+|.. .|+.++--.+..-+++++.|.++++|.+...       .+..++..|+.+|.++.|-.+.++++++ |+
T Consensus       727 rL~nf~GH~~-~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~Sc-D~  804 (1034)
T KOG4190|consen  727 RLCNFTGHQE-KIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIASC-DG  804 (1034)
T ss_pred             eeecccCcHH-HhHHHHhcccccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceeeec-cC
Confidence            3566889988 8888877666666666667799999987632       2445667899999999999888877765 78


Q ss_pred             eEEEEEccCCceEEEecc--cCCCeEEEEEec--CCCEEEEe-cCCCeEEEeecCccceeeeeecCCCCCCCCccccccc
Q psy10867        100 KLHMWQISSGRLLATASS--HYQPITIVKWSA--DSNFIVTG-GEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTE  174 (343)
Q Consensus       100 ~i~v~~~~~~~~~~~~~~--~~~~v~~~~~~~--~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (343)
                      .|++||.--++++..+..  ..+.+..+..-|  +...++.| +...+|+++|.+.......+                 
T Consensus       805 giHlWDPFigr~Laq~~dapk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce~~~E~-----------------  867 (1034)
T KOG4190|consen  805 GIHLWDPFIGRLLAQMEDAPKEGAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCEWTCEL-----------------  867 (1034)
T ss_pred             cceeecccccchhHhhhcCcccCCCceeEecccCcchheeeeccchhhheeeecccccceeeE-----------------
Confidence            899999887877654321  122233333333  34444444 77899999999887554433                 


Q ss_pred             eeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEE-
Q psy10867        175 PLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKS-  252 (343)
Q Consensus       175 ~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i-  252 (343)
                      .+..-.+....+.++++.+.|  +.++.+-..|.|.+.|.++|+.+..+. .+.....++ .|..+.|+....|..+.+ 
T Consensus       868 kVcna~~Pna~~R~iaVa~~G--N~lAa~LSnGci~~LDaR~G~vINswrpmecdllqla-apsdq~L~~saldHslaVn  944 (1034)
T KOG4190|consen  868 KVCNAPGPNALTRAIAVADKG--NKLAAALSNGCIAILDARNGKVINSWRPMECDLLQLA-APSDQALAQSALDHSLAVN  944 (1034)
T ss_pred             EeccCCCCchheeEEEeccCc--chhhHHhcCCcEEEEecCCCceeccCCcccchhhhhc-CchhHHHHhhcccceeEee
Confidence            122223455678999999999  899999999999999999999887665 233333332 344556666666777766 


Q ss_pred             EEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEeccc----ceeeeecc---cCCceEE
Q psy10867        253 FCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTIS----RQCLRTIQ---HKGPVLG  325 (343)
Q Consensus       253 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~----~~~~~~~~---~~~~v~~  325 (343)
                      |-...+....           ..+....+..-  ...-|.-|+++.....+.+|.-..    ...+..++   ..+..++
T Consensus       945 Whaldgimh~-----------q~kpppepahf--lqsvgpSLV~a~~Gn~lgVYad~a~~ha~stitKiR~d~f~G~lTa 1011 (1034)
T KOG4190|consen  945 WHALDGIMHL-----------QDKPPPEPAHF--LQSVGPSLVTAQNGNILGVYADSAELHAESTITKIRPDEFPGTLTA 1011 (1034)
T ss_pred             ehhcCCeeee-----------ccCCCCcchhh--hhccCceeEEeccCcEEEEEecchhhhhhhhhccccccccCCccce
Confidence            6443321110           01111111100  112244567776666777774211    11122232   4566788


Q ss_pred             EEEccCCCeeeecc
Q psy10867        326 AFLGLLPPAIHDYD  339 (343)
Q Consensus       326 ~~~sp~~~~l~~~~  339 (343)
                      ++--|-...+++++
T Consensus      1012 la~LPLN~afLaGn 1025 (1034)
T KOG4190|consen 1012 LAPLPLNCAFLAGN 1025 (1034)
T ss_pred             eeeccccchhhccC
Confidence            88877766665554

>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal

Probab=99.33  E-value=1.1e-08  Score=77.22  Aligned_cols=195  Identities=9%  Similarity=0.038  Sum_probs=120.7

Q ss_pred             cceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecc------cCCcceEEEEECCCC-------CEEEEecCCeEEEE
Q psy10867         38 SPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRL------ICPGRISSMQASPDA-------AYIAVSIETKLHMW  104 (343)
Q Consensus        38 ~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~------~~~~~v~~~~~s~~~-------~~l~~~~d~~i~v~  104 (343)
                      .-+-++||||+.++|.+...|+|++||+...+...+..      .-...|..+.|.+..       ++|+...+|.++-|
T Consensus        45 QWRkl~WSpD~tlLa~a~S~G~i~vfdl~g~~lf~I~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy  124 (282)
T PF15492_consen   45 QWRKLAWSPDCTLLAYAESTGTIRVFDLMGSELFVIPPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSY  124 (282)
T ss_pred             hheEEEECCCCcEEEEEcCCCeEEEEecccceeEEcCcccccCCccccceeeeEeeccccccccceeEEEEeccceeeeE
Confidence            56789999999999999999999999998654332211      123457777776532       56777889888877


Q ss_pred             EccCC-----ceEEEec---ccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCcccccccee
Q psy10867        105 QISSG-----RLLATAS---SHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPL  176 (343)
Q Consensus       105 ~~~~~-----~~~~~~~---~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  176 (343)
                      -+..+     +....+.   .+...|.++.++|..++|+.|+....      +.+.                        
T Consensus       125 ~vs~gt~q~y~e~hsfsf~~~yp~Gi~~~vy~p~h~LLlVgG~~~~------~~~~------------------------  174 (282)
T PF15492_consen  125 LVSVGTNQGYQENHSFSFSSHYPHGINSAVYHPKHRLLLVGGCEQN------QDGM------------------------  174 (282)
T ss_pred             EEEcccCCcceeeEEEEecccCCCceeEEEEcCCCCEEEEeccCCC------CCcc------------------------
Confidence            76432     2223332   24678999999999998888775322      0000                        


Q ss_pred             eeecccccceEEEEeecCCCceEEEEeeCCCe------EEEEecCCCceEEE-eecCCcEEEEEEcCCCCEEEEEcCCCc
Q psy10867        177 HVKSQHSLPVTHVTLSKLGAKSRVASVSHDRT------CKIFDLCTGEDLLS-LILDTRLTCVAFDGTEDNIYMGTSEGV  249 (343)
Q Consensus       177 ~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~------i~~wd~~~~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~d~~  249 (343)
                        ..+....+++-.+..+.+.-..++...|+.      ..+|.+-+.+.... ......|..+..+|||..|++...+|.
T Consensus       175 --s~a~~~GLtaWRiL~~~Pyyk~v~~~~~~~~~~~~~~~~~~~~~~~~fs~~~~~~d~i~kmSlSPdg~~La~ih~sG~  252 (282)
T PF15492_consen  175 --SKASSCGLTAWRILSDSPYYKQVTSSEDDITASSKRRGLLRIPSFKFFSRQGQEQDGIFKMSLSPDGSLLACIHFSGS  252 (282)
T ss_pred             --ccccccCceEEEEcCCCCcEEEccccCccccccccccceeeccceeeeeccccCCCceEEEEECCCCCEEEEEEcCCe
Confidence              001222333333332222112222222221      12333332222211 124667999999999999999999999


Q ss_pred             EEEEEeecccccccc
Q psy10867        250 IKSFCLRQVPRTRDH  264 (343)
Q Consensus       250 i~i~d~~~~~~~~~~  264 (343)
                      |.+|++.+......+
T Consensus       253 lsLW~iPsL~~~~~W  267 (282)
T PF15492_consen  253 LSLWEIPSLRLQRSW  267 (282)
T ss_pred             EEEEecCcchhhccc
Confidence            999999887665554

>KOG3914|consensus

Probab=99.32  E-value=4.1e-11  Score=93.75  Aligned_cols=162  Identities=19%  Similarity=0.192  Sum_probs=115.9

Q ss_pred             cceEEEEeCCceEEEEEcCCCeEEEEeCCCccc-ceec--ccCCcceEEEEECCCCC-EEEE---ecCCeEEEEEccCCc
Q psy10867         38 SPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEK-AQLR--LICPGRISSMQASPDAA-YIAV---SIETKLHMWQISSGR  110 (343)
Q Consensus        38 ~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~-~~~~--~~~~~~v~~~~~s~~~~-~l~~---~~d~~i~v~~~~~~~  110 (343)
                      .+..+..+|+++++|.+..+....+++...... .+..  ......-+++.|..+.. .+++   +....+.+|....+.
T Consensus        64 a~~~~~~s~~~~llAv~~~~K~~~~f~~~~~~~~~kl~~~~~v~~~~~ai~~~~~~~sv~v~dkagD~~~~di~s~~~~~  143 (390)
T KOG3914|consen   64 APALVLTSDSGRLVAVATSSKQRAVFDYRENPKGAKLLDVSCVPKRPTAISFIREDTSVLVADKAGDVYSFDILSADSGR  143 (390)
T ss_pred             cccccccCCCceEEEEEeCCCceEEEEEecCCCcceeeeEeecccCcceeeeeeccceEEEEeecCCceeeeeecccccC
Confidence            445566778899999998877766776654432 1111  12223334444544433 3333   445677788776655


Q ss_pred             eEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEE
Q psy10867        111 LLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVT  190 (343)
Q Consensus       111 ~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  190 (343)
                      .. .+-+|-.-++.++|+||+++|+++..|..|++-.......+..                     -.-+|...|..++
T Consensus       144 ~~-~~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~Ies---------------------fclGH~eFVS~is  201 (390)
T KOG3914|consen  144 CE-PILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIES---------------------FCLGHKEFVSTIS  201 (390)
T ss_pred             cc-hhhhhhhhhheeeecCCCCEEEEecCCceEEEEecCcccchhh---------------------hccccHhheeeee
Confidence            44 3448999999999999999999999999999987765433222                     2357999999999


Q ss_pred             eecCCCceEEEEeeCCCeEEEEecCCCceEEEee
Q psy10867        191 LSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI  224 (343)
Q Consensus       191 ~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~  224 (343)
                      .-++.   .|++++.|+++++||+++|+.+.++.
T Consensus       202 l~~~~---~LlS~sGD~tlr~Wd~~sgk~L~t~d  232 (390)
T KOG3914|consen  202 LTDNY---LLLSGSGDKTLRLWDITSGKLLDTCD  232 (390)
T ss_pred             eccCc---eeeecCCCCcEEEEecccCCcccccc
Confidence            99875   68999999999999999999987765

>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=99.31  E-value=1.6e-08  Score=78.74  Aligned_cols=245  Identities=12%  Similarity=0.098  Sum_probs=156.5

Q ss_pred             cceEEEEeC-CceEEEEEcCCC-eEEEEeCCCcccceecccCCcce--EEEEECCCCCEEEEec------CCeEEEEEcc
Q psy10867         38 SPHSMCLLG-NDYVLGVEKGKP-MIQAWPVNSQEKAQLRLICPGRI--SSMQASPDAAYIAVSI------ETKLHMWQIS  107 (343)
Q Consensus        38 ~v~~~~~~~-~~~~~~~~~~~~-~i~iw~~~~~~~~~~~~~~~~~v--~~~~~s~~~~~l~~~~------d~~i~v~~~~  107 (343)
                      ....++.+| +...++.+..-| ...+||..+++..+.+....+.-  -.-.||+||++|.+++      .|.|-|||..
T Consensus         6 RgH~~a~~p~~~~avafaRRPG~~~~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~   85 (305)
T PF07433_consen    6 RGHGVAAHPTRPEAVAFARRPGTFALVFDCRTGQLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAA   85 (305)
T ss_pred             cccceeeCCCCCeEEEEEeCCCcEEEEEEcCCCceeeEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECc
Confidence            345678888 557777776655 56789999998886665444432  2567999999999852      4689999998


Q ss_pred             -CCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccce
Q psy10867        108 -SGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPV  186 (343)
Q Consensus       108 -~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  186 (343)
                       +-+.+..+..|.-.-..+.+.||++.|+.+.-  -|     .+                               |    
T Consensus        86 ~~~~ri~E~~s~GIGPHel~l~pDG~tLvVANG--GI-----~T-------------------------------h----  123 (305)
T PF07433_consen   86 RGYRRIGEFPSHGIGPHELLLMPDGETLVVANG--GI-----ET-------------------------------H----  123 (305)
T ss_pred             CCcEEEeEecCCCcChhhEEEcCCCCEEEEEcC--CC-----cc-------------------------------C----
Confidence             55777788877767788999999988877632  22     11                               1    


Q ss_pred             EEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-----cCCcEEEEEEcCCCCEEEEEcCCCc-------EEEEE
Q psy10867        187 THVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-----LDTRLTCVAFDGTEDNIYMGTSEGV-------IKSFC  254 (343)
Q Consensus       187 ~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-----~~~~i~~~~~~~~~~~l~~~~~d~~-------i~i~d  254 (343)
                            |+.....|=..+.+..+...|..+|+.+....     +...+..+++.++|..++..-..|.       |-+++
T Consensus       124 ------pd~GR~kLNl~tM~psL~~ld~~sG~ll~q~~Lp~~~~~lSiRHLa~~~~G~V~~a~Q~qg~~~~~~PLva~~~  197 (305)
T PF07433_consen  124 ------PDSGRAKLNLDTMQPSLVYLDARSGALLEQVELPPDLHQLSIRHLAVDGDGTVAFAMQYQGDPGDAPPLVALHR  197 (305)
T ss_pred             ------cccCceecChhhcCCceEEEecCCCceeeeeecCccccccceeeEEecCCCcEEEEEecCCCCCccCCeEEEEc
Confidence                  11000122233344555566677777666643     3456889999998887776544432       33333


Q ss_pred             eecccccccccccCCCCCCccccccCcEEEEEEccCCCEEE-EEeCCCcEEEEecccceeeeecccCCceEEEEEccCCC
Q psy10867        255 LRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLL-SSSADETLKIWHTISRQCLRTIQHKGPVLGAFLGLLPP  333 (343)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~  333 (343)
                      ....  .....    .+......-.+.+-+|++++++.+++ |+=.-+.+.+||..+++.+..... ..+..++-.+++ 
T Consensus       198 ~g~~--~~~~~----~p~~~~~~l~~Y~gSIa~~~~g~~ia~tsPrGg~~~~~d~~tg~~~~~~~l-~D~cGva~~~~~-  269 (305)
T PF07433_consen  198 RGGA--LRLLP----APEEQWRRLNGYIGSIAADRDGRLIAVTSPRGGRVAVWDAATGRLLGSVPL-PDACGVAPTDDG-  269 (305)
T ss_pred             CCCc--ceecc----CChHHHHhhCCceEEEEEeCCCCEEEEECCCCCEEEEEECCCCCEeecccc-CceeeeeecCCc-
Confidence            2221  11110    00111223457899999999998775 555678999999999998877652 234556666665 


Q ss_pred             eeeec
Q psy10867        334 AIHDY  338 (343)
Q Consensus       334 ~l~~~  338 (343)
                      ++++.
T Consensus       270 f~~ss  274 (305)
T PF07433_consen  270 FLVSS  274 (305)
T ss_pred             eEEeC
Confidence            44443

>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A

Probab=99.30  E-value=7.6e-09  Score=80.99  Aligned_cols=227  Identities=18%  Similarity=0.192  Sum_probs=138.8

Q ss_pred             CCeEEEEecCCceEEEEEecCCCC-cceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCE
Q psy10867         14 SGAISVWEPKGGTLLMSYKGASVL-SPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAY   92 (343)
Q Consensus        14 dg~i~iwd~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~   92 (343)
                      +|.|..||..+|+.+.+....... ...+..+..++.+++.. .++.+..||..+++.+..... .+.+.......++.+
T Consensus         2 ~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~l~~~d~~tG~~~W~~~~-~~~~~~~~~~~~~~v   79 (238)
T PF13360_consen    2 DGTLSALDPRTGKELWSYDLGPGIGGPVATAVPDGGRVYVAS-GDGNLYALDAKTGKVLWRFDL-PGPISGAPVVDGGRV   79 (238)
T ss_dssp             TSEEEEEETTTTEEEEEEECSSSCSSEEETEEEETTEEEEEE-TTSEEEEEETTTSEEEEEEEC-SSCGGSGEEEETTEE
T ss_pred             CCEEEEEECCCCCEEEEEECCCCCCCccceEEEeCCEEEEEc-CCCEEEEEECCCCCEEEEeec-cccccceeeeccccc
Confidence            689999999999999988753210 22222333556666664 459999999999987744432 222111123335666


Q ss_pred             EEEecCCeEEEEEccCCceEEEe-cccC---CCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCc
Q psy10867         93 IAVSIETKLHMWQISSGRLLATA-SSHY---QPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKG  168 (343)
Q Consensus        93 l~~~~d~~i~v~~~~~~~~~~~~-~~~~---~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~  168 (343)
                      ++.+.++.++.+|..+|+.+... ....   ..........+++.++.+..++.|..+|+.+++.........+....  
T Consensus        80 ~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~--  157 (238)
T PF13360_consen   80 YVGTSDGSLYALDAKTGKVLWSIYLTSSPPAGVRSSSSPAVDGDRLYVGTSSGKLVALDPKTGKLLWKYPVGEPRGSS--  157 (238)
T ss_dssp             EEEETTSEEEEEETTTSCEEEEEEE-SSCTCSTB--SEEEEETTEEEEEETCSEEEEEETTTTEEEEEEESSTT-SS---
T ss_pred             ccccceeeeEecccCCcceeeeeccccccccccccccCceEecCEEEEEeccCcEEEEecCCCcEEEEeecCCCCCCc--
Confidence            66677889999999999998874 3221   11223333334788888888999999999999877765421110000  


Q ss_pred             cccccceeeeecccccceEEEEeecCCCceEEEEeeCCCe-EEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcCC
Q psy10867        169 VTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRT-CKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSE  247 (343)
Q Consensus       169 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~-i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d  247 (343)
                            ...    ....+..-.+..++   .++.++.++. +.+ |+.+++.+.... ...... ...+++..|++++.+
T Consensus       158 ------~~~----~~~~~~~~~~~~~~---~v~~~~~~g~~~~~-d~~tg~~~w~~~-~~~~~~-~~~~~~~~l~~~~~~  221 (238)
T PF13360_consen  158 ------PIS----SFSDINGSPVISDG---RVYVSSGDGRVVAV-DLATGEKLWSKP-ISGIYS-LPSVDGGTLYVTSSD  221 (238)
T ss_dssp             -------EE----EETTEEEEEECCTT---EEEEECCTSSEEEE-ETTTTEEEEEEC-SS-ECE-CEECCCTEEEEEETT
T ss_pred             ------cee----eecccccceEEECC---EEEEEcCCCeEEEE-ECCCCCEEEEec-CCCccC-CceeeCCEEEEEeCC
Confidence                  000    00111222222233   4555666664 555 999999775433 333322 245678888888899


Q ss_pred             CcEEEEEeecccc
Q psy10867        248 GVIKSFCLRQVPR  260 (343)
Q Consensus       248 ~~i~i~d~~~~~~  260 (343)
                      +.|..||+++++.
T Consensus       222 ~~l~~~d~~tG~~  234 (238)
T PF13360_consen  222 GRLYALDLKTGKV  234 (238)
T ss_dssp             TEEEEEETTTTEE
T ss_pred             CEEEEEECCCCCE
Confidence            9999999988653

...

>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A

Probab=99.28  E-value=4.3e-09  Score=82.40  Aligned_cols=223  Identities=13%  Similarity=0.089  Sum_probs=136.7

Q ss_pred             CCeEEEEeCCCcccceecccC--CcceEEEEECCCCCEEEEecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEE
Q psy10867         57 KPMIQAWPVNSQEKAQLRLIC--PGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFI  134 (343)
Q Consensus        57 ~~~i~iw~~~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  134 (343)
                      +|.|..||..+++.+......  .....+.....++.+++.+.++.|..||..+|+.+..... .+.+.... ...+..+
T Consensus         2 ~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~-~~~~~~~~-~~~~~~v   79 (238)
T PF13360_consen    2 DGTLSALDPRTGKELWSYDLGPGIGGPVATAVPDGGRVYVASGDGNLYALDAKTGKVLWRFDL-PGPISGAP-VVDGGRV   79 (238)
T ss_dssp             TSEEEEEETTTTEEEEEEECSSSCSSEEETEEEETTEEEEEETTSEEEEEETTTSEEEEEEEC-SSCGGSGE-EEETTEE
T ss_pred             CCEEEEEECCCCCEEEEEECCCCCCCccceEEEeCCEEEEEcCCCEEEEEECCCCCEEEEeec-ccccccee-eeccccc
Confidence            588999999888887444321  1222222333355555567899999999999998877764 22221112 2245566


Q ss_pred             EEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEec
Q psy10867        135 VTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDL  214 (343)
Q Consensus       135 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~  214 (343)
                      +.++.++.+..+|..+++.......                 ....... ..........+  ..++.+..++.|..+|+
T Consensus        80 ~v~~~~~~l~~~d~~tG~~~W~~~~-----------------~~~~~~~-~~~~~~~~~~~--~~~~~~~~~g~l~~~d~  139 (238)
T PF13360_consen   80 YVGTSDGSLYALDAKTGKVLWSIYL-----------------TSSPPAG-VRSSSSPAVDG--DRLYVGTSSGKLVALDP  139 (238)
T ss_dssp             EEEETTSEEEEEETTTSCEEEEEEE------------------SSCTCS-TB--SEEEEET--TEEEEEETCSEEEEEET
T ss_pred             ccccceeeeEecccCCcceeeeecc-----------------ccccccc-cccccCceEec--CEEEEEeccCcEEEEec
Confidence            7777888999999999877665210                 0000011 11111222224  57888888999999999


Q ss_pred             CCCceEEEeecCCc-----------EEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEE
Q psy10867        215 CTGEDLLSLILDTR-----------LTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVT  283 (343)
Q Consensus       215 ~~~~~~~~~~~~~~-----------i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  283 (343)
                      ++|+.+.......+           +..-....++ .++++..++.+..+|+.+......           ..  ...+.
T Consensus       140 ~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~g~~~~~d~~tg~~~w~-----------~~--~~~~~  205 (238)
T PF13360_consen  140 KTGKLLWKYPVGEPRGSSPISSFSDINGSPVISDG-RVYVSSGDGRVVAVDLATGEKLWS-----------KP--ISGIY  205 (238)
T ss_dssp             TTTEEEEEEESSTT-SS--EEEETTEEEEEECCTT-EEEEECCTSSEEEEETTTTEEEEE-----------EC--SS-EC
T ss_pred             CCCcEEEEeecCCCCCCcceeeecccccceEEECC-EEEEEcCCCeEEEEECCCCCEEEE-----------ec--CCCcc
Confidence            99999888874221           1122222234 777787788644448877653211           11  11122


Q ss_pred             EEEEccCCCEEEEEeCCCcEEEEecccceeeee
Q psy10867        284 SLSCSITGITLLSSSADETLKIWHTISRQCLRT  316 (343)
Q Consensus       284 ~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~  316 (343)
                      .+ ..+++..|+.++.++.|..||+++|+.+.+
T Consensus       206 ~~-~~~~~~~l~~~~~~~~l~~~d~~tG~~~W~  237 (238)
T PF13360_consen  206 SL-PSVDGGTLYVTSSDGRLYALDLKTGKVVWQ  237 (238)
T ss_dssp             EC-EECCCTEEEEEETTTEEEEEETTTTEEEEE
T ss_pred             CC-ceeeCCEEEEEeCCCEEEEEECCCCCEEeE
Confidence            21 346777888888999999999999998754

...

>KOG4190|consensus

Probab=99.27  E-value=3.2e-11  Score=98.57  Aligned_cols=213  Identities=17%  Similarity=0.183  Sum_probs=144.9

Q ss_pred             eecccCCcceEEEEECC-CCCEEEEecCCeEEEEEccCC-------ceEEEecccCCCeEEEEEecCCCEEEEecCCCeE
Q psy10867         72 QLRLICPGRISSMQASP-DAAYIAVSIETKLHMWQISSG-------RLLATASSHYQPITIVKWSADSNFIVTGGEDGTI  143 (343)
Q Consensus        72 ~~~~~~~~~v~~~~~s~-~~~~l~~~~d~~i~v~~~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i  143 (343)
                      ..+.+|...|..++--. .+.++.++.|.+|++|.++..       .+..++..|+.+|.++.|..+.++++++  ||.|
T Consensus       729 ~nf~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~Sc--D~gi  806 (1034)
T KOG4190|consen  729 CNFTGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIASC--DGGI  806 (1034)
T ss_pred             ecccCcHHHhHHHHhcccccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceeeec--cCcc
Confidence            34558888888776444 445666689999999998642       4677888999999999999988888765  7889


Q ss_pred             EEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEe-eCCCeEEEEecCCCceEEE
Q psy10867        144 CVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASV-SHDRTCKIFDLCTGEDLLS  222 (343)
Q Consensus       144 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~-~~d~~i~~wd~~~~~~~~~  222 (343)
                      .+||.--++....+.                 .   ....+.+..+...++-...++..+ +...+++++|.+..+-...
T Consensus       807 HlWDPFigr~Laq~~-----------------d---apk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce~~~E  866 (1034)
T KOG4190|consen  807 HLWDPFIGRLLAQME-----------------D---APKEGAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCEWTCE  866 (1034)
T ss_pred             eeecccccchhHhhh-----------------c---CcccCCCceeEecccCcchheeeeccchhhheeeecccccceee
Confidence            999987655433221                 0   011222333333333111344444 7899999999999887776


Q ss_pred             eec------CCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEE
Q psy10867        223 LIL------DTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLS  296 (343)
Q Consensus       223 ~~~------~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s  296 (343)
                      ++.      ...+.+++..+.|+.++++-.+|.|.+.|.+++.....+           +.-......++ .|..+.|+.
T Consensus       867 ~kVcna~~Pna~~R~iaVa~~GN~lAa~LSnGci~~LDaR~G~vINsw-----------rpmecdllqla-apsdq~L~~  934 (1034)
T KOG4190|consen  867 LKVCNAPGPNALTRAIAVADKGNKLAAALSNGCIAILDARNGKVINSW-----------RPMECDLLQLA-APSDQALAQ  934 (1034)
T ss_pred             EEeccCCCCchheeEEEeccCcchhhHHhcCCcEEEEecCCCceeccC-----------Ccccchhhhhc-CchhHHHHh
Confidence            652      244889999999999999999999999999987653322           22222222333 355667777


Q ss_pred             EeCCCcEEE-Eecccceeeeecc
Q psy10867        297 SSADETLKI-WHTISRQCLRTIQ  318 (343)
Q Consensus       297 ~~~dg~i~i-wd~~~~~~~~~~~  318 (343)
                      ...|.++.+ |...+|....+.+
T Consensus       935 saldHslaVnWhaldgimh~q~k  957 (1034)
T KOG4190|consen  935 SALDHSLAVNWHALDGIMHLQDK  957 (1034)
T ss_pred             hcccceeEeeehhcCCeeeeccC
Confidence            777888888 8776665444433

>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation []

Probab=99.27  E-value=2.8e-08  Score=90.96  Aligned_cols=249  Identities=16%  Similarity=0.168  Sum_probs=152.4

Q ss_pred             cceEEEEeCCceEEEEEcC------CCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEEec----CCeEEEEEcc
Q psy10867         38 SPHSMCLLGNDYVLGVEKG------KPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSI----ETKLHMWQIS  107 (343)
Q Consensus        38 ~v~~~~~~~~~~~~~~~~~------~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~----d~~i~v~~~~  107 (343)
                      .-..++|-.||.++|++.-      ...+++|+-+ |.....-..-.+--.+++|-|.|+++|+..    ...|.+|. +
T Consensus       211 ~~~~ISWRGDG~yFAVss~~~~~~~~R~iRVy~Re-G~L~stSE~v~gLe~~l~WrPsG~lIA~~q~~~~~~~VvFfE-r  288 (928)
T PF04762_consen  211 GRVRISWRGDGEYFAVSSVEPETGSRRVIRVYSRE-GELQSTSEPVDGLEGALSWRPSGNLIASSQRLPDRHDVVFFE-R  288 (928)
T ss_pred             CceEEEECCCCcEEEEEEEEcCCCceeEEEEECCC-ceEEeccccCCCccCCccCCCCCCEEEEEEEcCCCcEEEEEe-c
Confidence            3456788899999888753      2489999876 443333323333345789999999999843    35788887 4


Q ss_pred             CCceEEEec----ccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeec-cc
Q psy10867        108 SGRLLATAS----SHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKS-QH  182 (343)
Q Consensus       108 ~~~~~~~~~----~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  182 (343)
                      +|.....|.    .....|..+.|++|+..|+..-.|. |.+|-..+..--..                    +.+. ..
T Consensus       289 NGLrhgeF~l~~~~~~~~v~~l~Wn~ds~iLAv~~~~~-vqLWt~~NYHWYLK--------------------qei~~~~  347 (928)
T PF04762_consen  289 NGLRHGEFTLRFDPEEEKVIELAWNSDSEILAVWLEDR-VQLWTRSNYHWYLK--------------------QEIRFSS  347 (928)
T ss_pred             CCcEeeeEecCCCCCCceeeEEEECCCCCEEEEEecCC-ceEEEeeCCEEEEE--------------------EEEEccC
Confidence            454333332    3456899999999999999977655 99998876532111                    1111 11


Q ss_pred             ccceEEEEeecCCCceEEEEeeCCCeEEEEecC----C----------------Cc----------------eEEEeecC
Q psy10867        183 SLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLC----T----------------GE----------------DLLSLILD  226 (343)
Q Consensus       183 ~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~----~----------------~~----------------~~~~~~~~  226 (343)
                      ...+..+.|+|..+ ..|...+.+|.+..++..    .                |.                ....+..+
T Consensus       348 ~~~~~~~~Wdpe~p-~~L~v~t~~g~~~~~~~~~~v~~s~~~~~~D~g~vaVIDG~~lllTpf~~a~VPPPMs~~~l~~~  426 (928)
T PF04762_consen  348 SESVNFVKWDPEKP-LRLHVLTSNGQYEIYDFAWDVSRSPGSSPNDNGTVAVIDGNKLLLTPFRRAVVPPPMSSYELELP  426 (928)
T ss_pred             CCCCCceEECCCCC-CEEEEEecCCcEEEEEEEEEEEecCCCCccCceEEEEEeCCeEEEecccccCCCchHhceEEcCC
Confidence            22334477777654 445555554555443321    1                00                11333457


Q ss_pred             CcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccc--cccccCCCC-----CCccccccCcEEEEEEccCCCEEEEEeC
Q psy10867        227 TRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTR--DHHIQDSTS-----NPDFIGHEKQVTSLSCSITGITLLSSSA  299 (343)
Q Consensus       227 ~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~--~~~~~~~~~-----~~~~~~~~~~v~~~~~s~~~~~l~s~~~  299 (343)
                      .+|.+++|++++..+++-..||.|.+|.........  .......-.     ..........+..++|..+..+++....
T Consensus       427 ~~v~~vaf~~~~~~~avl~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  506 (928)
T PF04762_consen  427 SPVNDVAFSPSNSRFAVLTSDGSLSIYEWDLKNMWSVKPPKLLSSISLDSMDISDSELPLGSLRQLAWLNDDTLLVLSDS  506 (928)
T ss_pred             CCcEEEEEeCCCCeEEEEECCCCEEEEEecCCCcccccCcchhhhcccccccccccccccccEEEEEEeCCCEEEEEEec
Confidence            789999999999889999999999999865533221  000000000     0011122456788888877776665555


Q ss_pred             C---CcEEEEeccc
Q psy10867        300 D---ETLKIWHTIS  310 (343)
Q Consensus       300 d---g~i~iwd~~~  310 (343)
                      +   ..+.++++..
T Consensus       507 ~~~~~~i~~~~~~~  520 (928)
T PF04762_consen  507 DSNQSKIVLVDIDD  520 (928)
T ss_pred             CcccceEEEEEecc
Confidence            4   6788888743

>KOG2695|consensus

Probab=99.26  E-value=2.9e-11  Score=92.86  Aligned_cols=161  Identities=16%  Similarity=0.116  Sum_probs=123.0

Q ss_pred             EEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEec
Q psy10867        135 VTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDL  214 (343)
Q Consensus       135 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~  214 (343)
                      ++.+.+..|-+-|+.++.                       .+.+. .+..|.++.|...+  +++..|...|.|..+|+
T Consensus       228 fs~G~sqqv~L~nvetg~-----------------------~qsf~-sksDVfAlQf~~s~--nLv~~GcRngeI~~iDL  281 (425)
T KOG2695|consen  228 FSVGLSQQVLLTNVETGH-----------------------QQSFQ-SKSDVFALQFAGSD--NLVFNGCRNGEIFVIDL  281 (425)
T ss_pred             ecccccceeEEEEeeccc-----------------------ccccc-cchhHHHHHhcccC--CeeEecccCCcEEEEEe
Confidence            455556778888887752                       22222 56678888888877  79999999999999999


Q ss_pred             CCC-----ceEEEeecCCcEEEEEEcC-CCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEE--
Q psy10867        215 CTG-----EDLLSLILDTRLTCVAFDG-TEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLS--  286 (343)
Q Consensus       215 ~~~-----~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--  286 (343)
                      +.+     .+...+.|++.|+++..-. ++++|++.+.+|+|++||++..+...        .+..+.+|...-.-+-  
T Consensus       282 R~rnqG~~~~a~rlyh~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~--------~V~qYeGHvN~~a~l~~~  353 (425)
T KOG2695|consen  282 RCRNQGNGWCAQRLYHDSSVTSLQILQFSQQKLMASDMTGKIKLYDLRATKCKK--------SVMQYEGHVNLSAYLPAH  353 (425)
T ss_pred             eecccCCCcceEEEEcCcchhhhhhhccccceEeeccCcCceeEeeehhhhccc--------ceeeeecccccccccccc
Confidence            864     5677778999999998877 78999999999999999999755422        2566777765544333  


Q ss_pred             EccCCCEEEEEeCCCcEEEEecccceeeeeccc-----CCceEEEEEc
Q psy10867        287 CSITGITLLSSSADETLKIWHTISRQCLRTIQH-----KGPVLGAFLG  329 (343)
Q Consensus       287 ~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-----~~~v~~~~~s  329 (343)
                      ..+....+++++.|...|||.+++|.++.++..     ...+.+++|.
T Consensus       354 v~~eeg~I~s~GdDcytRiWsl~~ghLl~tipf~~s~~e~d~~sv~~~  401 (425)
T KOG2695|consen  354 VKEEEGSIFSVGDDCYTRIWSLDSGHLLCTIPFPYSASEVDIPSVAFD  401 (425)
T ss_pred             cccccceEEEccCeeEEEEEecccCceeeccCCCCccccccccceehh
Confidence            345667899999999999999999999999872     2345566665

>KOG4714|consensus

Probab=99.22  E-value=8.7e-10  Score=81.64  Aligned_cols=146  Identities=12%  Similarity=0.204  Sum_probs=96.3

Q ss_pred             ceEEEEEcCCCeEEEEeCCCcccc--eecccCCcceEEEEECCCCCEEEEec------CCeEEEEEccCCceEEEecccC
Q psy10867         48 DYVLGVEKGKPMIQAWPVNSQEKA--QLRLICPGRISSMQASPDAAYIAVSI------ETKLHMWQISSGRLLATASSHY  119 (343)
Q Consensus        48 ~~~~~~~~~~~~i~iw~~~~~~~~--~~~~~~~~~v~~~~~s~~~~~l~~~~------d~~i~v~~~~~~~~~~~~~~~~  119 (343)
                      +.-++++..||.+.+++.+....+  +....|.+. .+......++++.++.      -+..+.|+++..+.+..-....
T Consensus       101 ~t~V~~~~~dg~~~v~s~~~~~~~~~~i~~~~~~~-as~~~~~~~~~i~s~~~g~~n~~d~~~a~~~~p~~t~~~~~~~~  179 (319)
T KOG4714|consen  101 DNRVCIGYADGSLAVFSTDKDLALMSRIPSIHSGS-ASRKICRHGNSILSGGCGNWNAQDNFYANTLDPIKTLIPSKKAL  179 (319)
T ss_pred             CCceEecCCCceEEEEechHHHhhhhhcccccccc-cccceeecccEEecCCcceEeeccceeeeccccccccccccccc
Confidence            445666667799999987762222  111112211 1222223455555432      3456666665433222222223


Q ss_pred             CCeEEEEEec-CCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCce
Q psy10867        120 QPITIVKWSA-DSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKS  198 (343)
Q Consensus       120 ~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~  198 (343)
                      ..|.+++-+| ..+.+++|+.||.+.+||.+....                     +...+..|+.++..+-|+|..+ .
T Consensus       180 ~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~---------------------p~S~l~ahk~~i~eV~FHpk~p-~  237 (319)
T KOG4714|consen  180 DAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAM---------------------PVSLLKAHKAEIWEVHFHPKNP-E  237 (319)
T ss_pred             ccchhhhCCcccccEEEEecCCCeEEEEEcccccc---------------------hHHHHHHhhhhhhheeccCCCc-h
Confidence            3499999999 456788889999999999988632                     6667788999999999999877 7


Q ss_pred             EEEEeeCCCeEEEEecCC
Q psy10867        199 RVASVSHDRTCKIFDLCT  216 (343)
Q Consensus       199 ~l~~~~~d~~i~~wd~~~  216 (343)
                      .|+++++||.+.-||..+
T Consensus       238 ~Lft~sedGslw~wdas~  255 (319)
T KOG4714|consen  238 HLFTCSEDGSLWHWDAST  255 (319)
T ss_pred             heeEecCCCcEEEEcCCC
Confidence            899999999999999654

>PRK11138 outer membrane biogenesis protein BamB; Provisional

Probab=99.21  E-value=1.4e-08  Score=85.53  Aligned_cols=256  Identities=13%  Similarity=0.076  Sum_probs=153.9

Q ss_pred             EEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceE-EEE
Q psy10867          7 VAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRIS-SMQ   85 (343)
Q Consensus         7 ~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~-~~~   85 (343)
                      .+|.++.+|.+..+|.++|+.+.+.+.... ...+.... ++.+++. ..++.+.-+|.++++.+.........+. ...
T Consensus       122 ~v~v~~~~g~l~ald~~tG~~~W~~~~~~~-~~ssP~v~-~~~v~v~-~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~  198 (394)
T PRK11138        122 KVYIGSEKGQVYALNAEDGEVAWQTKVAGE-ALSRPVVS-DGLVLVH-TSNGMLQALNESDGAVKWTVNLDVPSLTLRGE  198 (394)
T ss_pred             EEEEEcCCCEEEEEECCCCCCcccccCCCc-eecCCEEE-CCEEEEE-CCCCEEEEEEccCCCEeeeecCCCCcccccCC
Confidence            456667789999999999999988776543 22222222 4555554 4458999999999987744322111000 000


Q ss_pred             ECC---CCCEEEEecCCeEEEEEccCCceEEEecccC--C-----CeEEEEEec--CCCEEEEecCCCeEEEeecCccce
Q psy10867         86 ASP---DAAYIAVSIETKLHMWQISSGRLLATASSHY--Q-----PITIVKWSA--DSNFIVTGGEDGTICVWQLSRLIC  153 (343)
Q Consensus        86 ~s~---~~~~l~~~~d~~i~v~~~~~~~~~~~~~~~~--~-----~v~~~~~~~--~~~~l~s~~~dg~i~iwd~~~~~~  153 (343)
                      -+|   ++..++.+.++.+..+|..+|+.+.......  +     ....+.-+|  .+..++.++.+|.+..+|..+++.
T Consensus       199 ~sP~v~~~~v~~~~~~g~v~a~d~~~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~~~~g~l~ald~~tG~~  278 (394)
T PRK11138        199 SAPATAFGGAIVGGDNGRVSAVLMEQGQLIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYALAYNGNLVALDLRSGQI  278 (394)
T ss_pred             CCCEEECCEEEEEcCCCEEEEEEccCChhhheeccccCCCccchhcccccCCCcEEECCEEEEEEcCCeEEEEECCCCCE
Confidence            112   3455666778999999999987765442110  0     011111222  345677777889999999998866


Q ss_pred             eeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeec--CCcEEE
Q psy10867        154 KQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLIL--DTRLTC  231 (343)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~--~~~i~~  231 (343)
                      ......                        .....+..  .+  ..++.++.+|.+..+|..+++.+.....  .....+
T Consensus       279 ~W~~~~------------------------~~~~~~~~--~~--~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~s  330 (394)
T PRK11138        279 VWKREY------------------------GSVNDFAV--DG--GRIYLVDQNDRVYALDTRGGVELWSQSDLLHRLLTA  330 (394)
T ss_pred             EEeecC------------------------CCccCcEE--EC--CEEEEEcCCCeEEEEECCCCcEEEcccccCCCcccC
Confidence            553210                        00111222  23  4677788899999999999988775542  111222


Q ss_pred             EEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEE-EEEEccCCCEEEEEeCCCcEEEEec
Q psy10867        232 VAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVT-SLSCSITGITLLSSSADETLKIWHT  308 (343)
Q Consensus       232 ~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~s~~~~~l~s~~~dg~i~iwd~  308 (343)
                      ...  .+.++++++.+|.++.+|..+++......           -....+. ...+  .+..|+.++.||.|+.++.
T Consensus       331 p~v--~~g~l~v~~~~G~l~~ld~~tG~~~~~~~-----------~~~~~~~s~P~~--~~~~l~v~t~~G~l~~~~~  393 (394)
T PRK11138        331 PVL--YNGYLVVGDSEGYLHWINREDGRFVAQQK-----------VDSSGFLSEPVV--ADDKLLIQARDGTVYAITR  393 (394)
T ss_pred             CEE--ECCEEEEEeCCCEEEEEECCCCCEEEEEE-----------cCCCcceeCCEE--ECCEEEEEeCCceEEEEeC
Confidence            222  26688899999999999988765433221           1111121 1122  2447888899999888764

>KOG0309|consensus

Probab=99.21  E-value=1e-10  Score=98.59  Aligned_cols=226  Identities=17%  Similarity=0.222  Sum_probs=163.2

Q ss_pred             CcceEEEEECCCCCEEEEecCCeEEEEEccCC-ceEEEecccC--CCeEEEEEecCC--CEEEEecCCCeEEEeecCccc
Q psy10867         78 PGRISSMQASPDAAYIAVSIETKLHMWQISSG-RLLATASSHY--QPITIVKWSADS--NFIVTGGEDGTICVWQLSRLI  152 (343)
Q Consensus        78 ~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~-~~~~~~~~~~--~~v~~~~~~~~~--~~l~s~~~dg~i~iwd~~~~~  152 (343)
                      .+.+..+..+|.|+-+|......+.+.|+... .+..-+ .|.  -.|-.+.|+|..  .+-++......-.+|++....
T Consensus        24 ~~~~~a~si~p~grdi~lAsr~gl~i~dld~p~~ppr~l-~h~tpw~vad~qws~h~a~~~wiVsts~qkaiiwnlA~ss  102 (1081)
T KOG0309|consen   24 DGGFNAVSINPSGRDIVLASRQGLYIIDLDDPFTPPRWL-HHITPWQVADVQWSPHPAKPYWIVSTSNQKAIIWNLAKSS  102 (1081)
T ss_pred             cCcccceeeccccchhhhhhhcCeEEEeccCCCCCceee-eccCcchhcceecccCCCCceeEEecCcchhhhhhhhcCC
Confidence            46678888999998888766666777787654 222222 232  246678887733  344444555677789987643


Q ss_pred             eeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceE-EEee-cCCcEE
Q psy10867        153 CKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDL-LSLI-LDTRLT  230 (343)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~-~~~~-~~~~i~  230 (343)
                      ..                   .....+.+|...|+.+.|.|..+ ..+++++.|..+..||+++.... ..+. -.....
T Consensus       103 ~~-------------------aIef~lhghsraitd~n~~~q~p-dVlatcsvdt~vh~wd~rSp~~p~ys~~~w~s~as  162 (1081)
T KOG0309|consen  103 SN-------------------AIEFVLHGHSRAITDINFNPQHP-DVLATCSVDTYVHAWDMRSPHRPFYSTSSWRSAAS  162 (1081)
T ss_pred             cc-------------------ceEEEEecCccceeccccCCCCC-cceeeccccccceeeeccCCCcceeeeecccccCc
Confidence            21                   24566788999999999999887 79999999999999999987543 3332 456678


Q ss_pred             EEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccC-CCEEEEEeCCCcEEEEecc
Q psy10867        231 CVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSIT-GITLLSSSADETLKIWHTI  309 (343)
Q Consensus       231 ~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~s~~~dg~i~iwd~~  309 (343)
                      .+.|+-....+.+.+..+.|.+||++.+..          ++..+++|...|+.+.|..- ...+.+++.|++|++||..
T Consensus       163 qVkwnyk~p~vlasshg~~i~vwd~r~gs~----------pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~  232 (1081)
T KOG0309|consen  163 QVKWNYKDPNVLASSHGNDIFVWDLRKGST----------PLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYS  232 (1081)
T ss_pred             eeeecccCcchhhhccCCceEEEeccCCCc----------ceEEecccceeeehHHHhhhhhhhhcccCCCCceeeeccc
Confidence            899988777777778888999999998644          36677888888999988652 3468899999999999987


Q ss_pred             cce--eeeecccCCceEEEEEccCCCe
Q psy10867        310 SRQ--CLRTIQHKGPVLGAFLGLLPPA  334 (343)
Q Consensus       310 ~~~--~~~~~~~~~~v~~~~~sp~~~~  334 (343)
                      ...  .-++.....+|+.-.+-|-|+-
T Consensus       233 kSt~e~~~~vtt~~piw~~r~~Pfg~g  259 (1081)
T KOG0309|consen  233 KSTTESKRTVTTNFPIWRGRYLPFGEG  259 (1081)
T ss_pred             ccccccceeccccCcceeccccccCce
Confidence            543  2333346677887777776553

>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=99.20  E-value=3.1e-08  Score=81.98  Aligned_cols=284  Identities=16%  Similarity=0.148  Sum_probs=154.4

Q ss_pred             eCCceEEEEE----------cCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEEecCCeEEEEEccCCceEEE
Q psy10867         45 LGNDYVLGVE----------KGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLAT  114 (343)
Q Consensus        45 ~~~~~~~~~~----------~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~~  114 (343)
                      |||++++...          .. +.+.++|+++++....... ...+....|||+|+.+|-..++.|.+++..++...+.
T Consensus         1 S~d~~~~l~~~~~~~~~r~s~~-~~y~i~d~~~~~~~~l~~~-~~~~~~~~~sP~g~~~~~v~~~nly~~~~~~~~~~~l   78 (353)
T PF00930_consen    1 SPDGKFVLFATNYTKQWRHSFK-GDYYIYDIETGEITPLTPP-PPKLQDAKWSPDGKYIAFVRDNNLYLRDLATGQETQL   78 (353)
T ss_dssp             -TTSSEEEEEEEEEEESSSEEE-EEEEEEETTTTEEEESS-E-ETTBSEEEE-SSSTEEEEEETTEEEEESSTTSEEEES
T ss_pred             CCCCCeEEEEECcEEeeeeccc-eeEEEEecCCCceEECcCC-ccccccceeecCCCeeEEEecCceEEEECCCCCeEEe
Confidence            4666655552          22 5788999999776554433 5678899999999999998999999999887754432


Q ss_pred             ec-cc----------------CCCeEEEEEecCCCEEEEecC-CCeEEEeecC---ccc----eeeeeecCCCCCCCCcc
Q psy10867        115 AS-SH----------------YQPITIVKWSADSNFIVTGGE-DGTICVWQLS---RLI----CKQTVAFGIPGSSGKGV  169 (343)
Q Consensus       115 ~~-~~----------------~~~v~~~~~~~~~~~l~s~~~-dg~i~iwd~~---~~~----~~~~~~~~~~~~~~~~~  169 (343)
                      -. +.                -+.-..+-|+||+++|+.... +..|..+.+.   ...    ....+..+.++......
T Consensus        79 T~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~~~d~~~v~~~~~~~~~~~~~~yp~~~~~~YPk~G~~np~v  158 (353)
T PF00930_consen   79 TTDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFLRFDEREVPEYPLPDYSPPDSQYPEVESIRYPKAGDPNPRV  158 (353)
T ss_dssp             ES--TTTEEESB--HHHHHHTSSSSBSEEE-TTSSEEEEEEEE-TTS-EEEEEEESSSTESS-EEEEEE--BTTS---EE
T ss_pred             ccccceeEEcCccceeccccccccccceEECCCCCEEEEEEECCcCCceEEeeccCCccccCCcccccccCCCCCcCCce
Confidence            21 10                122356889999999888654 3344444332   221    23333333333322111


Q ss_pred             --------ccccceeeee---cccccceEEEEeecCCCceEEEEe--eCC---CeEEEEecCCCceEEEee--cCCc---
Q psy10867        170 --------TGLTEPLHVK---SQHSLPVTHVTLSKLGAKSRVASV--SHD---RTCKIFDLCTGEDLLSLI--LDTR---  228 (343)
Q Consensus       170 --------~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~l~~~--~~d---~~i~~wd~~~~~~~~~~~--~~~~---  228 (343)
                              ......+...   ......+..+.|.+++  ..++..  ..+   ..+.++|..+++......  ....   
T Consensus       159 ~l~v~~~~~~~~~~~~~~~~~~~~~~yl~~v~W~~d~--~~l~~~~~nR~q~~~~l~~~d~~tg~~~~~~~e~~~~Wv~~  236 (353)
T PF00930_consen  159 SLFVVDLASGKTTELDPPNSLNPQDYYLTRVGWSPDG--KRLWVQWLNRDQNRLDLVLCDASTGETRVVLEETSDGWVDV  236 (353)
T ss_dssp             EEEEEESSSTCCCEE---HHHHTSSEEEEEEEEEETT--EEEEEEEEETTSTEEEEEEEEECTTTCEEEEEEESSSSSSS
T ss_pred             EEEEEECCCCcEEEeeeccccCCCccCcccceecCCC--cEEEEEEcccCCCEEEEEEEECCCCceeEEEEecCCcceee
Confidence                    0000111111   2345568889999998  533332  222   346677887776544433  2222   


Q ss_pred             EEEEEEc-CCCC-EEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEE-EEEccCCCEEE-EEeCCC---
Q psy10867        229 LTCVAFD-GTED-NIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTS-LSCSITGITLL-SSSADE---  301 (343)
Q Consensus       229 i~~~~~~-~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~s~~~~~l~-s~~~dg---  301 (343)
                      .....+. +++. ++.....+|.-+|+-+......          ...+....-.|+. +.++++++.|. ++..++   
T Consensus       237 ~~~~~~~~~~~~~~l~~s~~~G~~hly~~~~~~~~----------~~~lT~G~~~V~~i~~~d~~~~~iyf~a~~~~p~~  306 (353)
T PF00930_consen  237 YDPPHFLGPDGNEFLWISERDGYRHLYLYDLDGGK----------PRQLTSGDWEVTSILGWDEDNNRIYFTANGDNPGE  306 (353)
T ss_dssp             SSEEEE-TTTSSEEEEEEETTSSEEEEEEETTSSE----------EEESS-SSS-EEEEEEEECTSSEEEEEESSGGTTS
T ss_pred             ecccccccCCCCEEEEEEEcCCCcEEEEEcccccc----------eeccccCceeecccceEcCCCCEEEEEecCCCCCc
Confidence            2244544 5554 5555667786666655543221          1123334455644 67888877554 555432   


Q ss_pred             -cEEEEecccceeeeecccCCce-EEEEEccCCCeeeecccCC
Q psy10867        302 -TLKIWHTISRQCLRTIQHKGPV-LGAFLGLLPPAIHDYDFTP  342 (343)
Q Consensus       302 -~i~iwd~~~~~~~~~~~~~~~v-~~~~~sp~~~~l~~~~~~~  342 (343)
                       .|+.-++..+..+..+...... ..+.|||++++++.....|
T Consensus       307 r~lY~v~~~~~~~~~~LT~~~~~~~~~~~Spdg~y~v~~~s~~  349 (353)
T PF00930_consen  307 RHLYRVSLDSGGEPKCLTCEDGDHYSASFSPDGKYYVDTYSGP  349 (353)
T ss_dssp             BEEEEEETTETTEEEESSTTSSTTEEEEE-TTSSEEEEEEESS
T ss_pred             eEEEEEEeCCCCCeEeccCCCCCceEEEECCCCCEEEEEEcCC
Confidence             4555555524455566533333 6999999999998765443

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....

>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases

Probab=99.20  E-value=1.6e-07  Score=81.13  Aligned_cols=298  Identities=12%  Similarity=0.093  Sum_probs=166.7

Q ss_pred             ceEEEecCCCCeEEEEecCCceEEEEEecCCCC-----cc--eEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccC
Q psy10867          5 NEVAFSYDGSGAISVWEPKGGTLLMSYKGASVL-----SP--HSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLIC   77 (343)
Q Consensus         5 ~~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~-----~v--~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~   77 (343)
                      ...+|..+.++.|+-.|..+|+.+.+++.....     .+  ..+.+..++++++. ..++.|.-+|.++++.+......
T Consensus        61 ~g~vy~~~~~g~l~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~g~~~~~~~~V~v~-~~~g~v~AlD~~TG~~~W~~~~~  139 (488)
T cd00216          61 DGDMYFTTSHSALFALDAATGKVLWRYDPKLPADRGCCDVVNRGVAYWDPRKVFFG-TFDGRLVALDAETGKQVWKFGNN  139 (488)
T ss_pred             CCEEEEeCCCCcEEEEECCCChhhceeCCCCCccccccccccCCcEEccCCeEEEe-cCCCeEEEEECCCCCEeeeecCC
Confidence            345677788899999999999998877654320     00  11122222455544 44599999999999887443322


Q ss_pred             Ccc--eEEEEECC---CCCEEEEe---------cCCeEEEEEccCCceEEEecccCC--------------------Ce-
Q psy10867         78 PGR--ISSMQASP---DAAYIAVS---------IETKLHMWQISSGRLLATASSHYQ--------------------PI-  122 (343)
Q Consensus        78 ~~~--v~~~~~s~---~~~~l~~~---------~d~~i~v~~~~~~~~~~~~~~~~~--------------------~v-  122 (343)
                      ...  -..+.-+|   ++.+++.+         .++.+..+|..+|+.+-.+.....                    .+ 
T Consensus       140 ~~~~~~~~i~ssP~v~~~~v~vg~~~~~~~~~~~~g~v~alD~~TG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~~vw  219 (488)
T cd00216         140 DQVPPGYTMTGAPTIVKKLVIIGSSGAEFFACGVRGALRAYDVETGKLLWRFYTTEPDPNAFPTWGPDRQMWGPGGGTSW  219 (488)
T ss_pred             CCcCcceEecCCCEEECCEEEEeccccccccCCCCcEEEEEECCCCceeeEeeccCCCcCCCCCCCCCcceecCCCCCcc
Confidence            110  01111112   34444432         257899999999988776643211                    01 


Q ss_pred             EEEEEecCCCEEEEecCCC------------------eEEEeecCccceeeeeecCCCCCCCCccccccceeeeeccccc
Q psy10867        123 TIVKWSADSNFIVTGGEDG------------------TICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSL  184 (343)
Q Consensus       123 ~~~~~~~~~~~l~s~~~dg------------------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (343)
                      ....+.+.+..++.++.++                  .|.-+|..+++.....+......            ..+.....
T Consensus       220 ~~pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~tG~~~W~~~~~~~~~------------~~~~~~s~  287 (488)
T cd00216         220 ASPTYDPKTNLVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDADTGKVKWFYQTTPHDL------------WDYDGPNQ  287 (488)
T ss_pred             CCeeEeCCCCEEEEECCCCCCCccCCccCCCCCCceeeEEEEcCCCCCEEEEeeCCCCCC------------cccccCCC
Confidence            1234444566777777655                  78899999988877654211000            00001111


Q ss_pred             ce-EEEEeecCCC-ceEEEEeeCCCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEE------------------
Q psy10867        185 PV-THVTLSKLGA-KSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMG------------------  244 (343)
Q Consensus       185 ~v-~~~~~~~~~~-~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~------------------  244 (343)
                      ++ ..+. .-++. ...++.++.+|.+...|.++|+.+.......  ..++.+|  ..++++                  
T Consensus       288 p~~~~~~-~~~g~~~~~V~~g~~~G~l~ald~~tG~~~W~~~~~~--~~~~~~~--~~vyv~~~~~~~~~~~~~~~~~~~  362 (488)
T cd00216         288 PSLADIK-PKDGKPVPAIVHAPKNGFFYVLDRTTGKLISARPEVE--QPMAYDP--GLVYLGAFHIPLGLPPQKKKRCKK  362 (488)
T ss_pred             CeEEecc-ccCCCeeEEEEEECCCceEEEEECCCCcEeeEeEeec--cccccCC--ceEEEccccccccCcccccCCCCC
Confidence            11 1110 01121 1367888899999999999999988765321  1123333  333332                  


Q ss_pred             cCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecccCCce
Q psy10867        245 TSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQHKGPV  323 (343)
Q Consensus       245 ~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v  323 (343)
                      ..+|.+.-.|+.+.+...............+... ..-..+.  ..+..|+.++.||.|+.+|.++|+.+.+++..+.+
T Consensus       363 ~~~G~l~AlD~~tG~~~W~~~~~~~~~~~~~g~~-~~~~~~~--~~g~~v~~g~~dG~l~ald~~tG~~lW~~~~~~~~  438 (488)
T cd00216         363 PGKGGLAALDPKTGKVVWEKREGTIRDSWNIGFP-HWGGSLA--TAGNLVFAGAADGYFRAFDATTGKELWKFRTPSGI  438 (488)
T ss_pred             CCceEEEEEeCCCCcEeeEeeCCccccccccCCc-ccCcceE--ecCCeEEEECCCCeEEEEECCCCceeeEEECCCCc
Confidence            2356777788777665544322100000000000 0001122  24568889999999999999999999988744444

The alignment model contains an 8-bladed beta-propeller.

>KOG1832|consensus

Probab=99.20  E-value=1.8e-11  Score=105.28  Aligned_cols=264  Identities=14%  Similarity=0.119  Sum_probs=184.3

Q ss_pred             EEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEEe--cCC-eEEE
Q psy10867         27 LLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVS--IET-KLHM  103 (343)
Q Consensus        27 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~--~d~-~i~v  103 (343)
                      ..++|..|.. ..+|++|+.+...++.|.-.|.|+++++.+|........|...|+.+.-+.||..+.++  ... -..+
T Consensus      1093 ~w~~frd~~~-~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~PlsaL 1171 (1516)
T KOG1832|consen 1093 SWRSFRDETA-LFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLSAL 1171 (1516)
T ss_pred             cchhhhcccc-ceeeEEeecCCceEEeeeccceEEEEEccCccccccccccccccccccccCCcceeeeeccccCchHHH
Confidence            3456777777 89999999999999999888999999999999988888999999999999999877752  333 6789


Q ss_pred             EEccC-CceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeeccc
Q psy10867        104 WQISS-GRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQH  182 (343)
Q Consensus       104 ~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (343)
                      |++.+ +...+.+.    .-.++.|+.....-+.|.......+||+++.....++-                  ....+.
T Consensus      1172 W~~~s~~~~~Hsf~----ed~~vkFsn~~q~r~~gt~~d~a~~YDvqT~~~l~tyl------------------t~~~~~ 1229 (1516)
T KOG1832|consen 1172 WDASSTGGPRHSFD----EDKAVKFSNSLQFRALGTEADDALLYDVQTCSPLQTYL------------------TDTVTS 1229 (1516)
T ss_pred             hccccccCcccccc----ccceeehhhhHHHHHhcccccceEEEecccCcHHHHhc------------------Ccchhh
Confidence            99864 33444443    34678898765555566666779999999986655421                  111112


Q ss_pred             ccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccc
Q psy10867        183 SLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTR  262 (343)
Q Consensus       183 ~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~  262 (343)
                      ...-++..|+|..  .+++   .||  .+||.+..+.+..|..-..--.-.|+|+|..++.-+     .|||++++....
T Consensus      1230 ~y~~n~a~FsP~D--~LIl---ndG--vLWDvR~~~aIh~FD~ft~~~~G~FHP~g~eVIINS-----EIwD~RTF~lLh 1297 (1516)
T KOG1832|consen 1230 SYSNNLAHFSPCD--TLIL---NDG--VLWDVRIPEAIHRFDQFTDYGGGGFHPSGNEVIINS-----EIWDMRTFKLLH 1297 (1516)
T ss_pred             hhhccccccCCCc--ceEe---eCc--eeeeeccHHHHhhhhhheecccccccCCCceEEeec-----hhhhhHHHHHHh
Confidence            2223678899987  5655   345  579999988887776433334456999999998876     499999876543


Q ss_pred             cccccCCCCCCccccccCcEEEEEEccCCCEEEEEe-----C-C-----------CcEEEEecccceeeeecccCCceEE
Q psy10867        263 DHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSS-----A-D-----------ETLKIWHTISRQCLRTIQHKGPVLG  325 (343)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~-----~-d-----------g~i~iwd~~~~~~~~~~~~~~~v~~  325 (343)
                      ..           +  .-.-..+.|+..|..+...-     . |           ...|-+|..+...+.++.....+.+
T Consensus      1298 ~V-----------P--~Ldqc~VtFNstG~VmYa~~~~~d~~sdvh~~r~k~p~fSSFRTf~a~dYs~iaTi~v~R~~~D 1364 (1516)
T KOG1832|consen 1298 SV-----------P--SLDQCAVTFNSTGDVMYAMLNIEDVMSDVHTRRVKHPLFSSFRTFDAIDYSDIATIPVDRCLLD 1364 (1516)
T ss_pred             cC-----------c--cccceEEEeccCccchhhhhhhhhhhhhhcccccccchhhhhccccccccccceeeecccchhh
Confidence            21           1  11124566777776554332     0 0           1345566666777778777777888


Q ss_pred             EEEccCCCeeeec
Q psy10867        326 AFLGLLPPAIHDY  338 (343)
Q Consensus       326 ~~~sp~~~~l~~~  338 (343)
                      ++-+|...+|.+-
T Consensus      1365 lct~~~D~~l~vI 1377 (1516)
T KOG1832|consen 1365 LCTEPTDSFLGVI 1377 (1516)
T ss_pred             hhcCCccceEEEE
Confidence            8888888887653

>PRK02888 nitrous-oxide reductase; Validated

Probab=99.19  E-value=2.1e-08  Score=85.32  Aligned_cols=132  Identities=8%  Similarity=-0.016  Sum_probs=91.1

Q ss_pred             CCeEEEEecCC-----CceEEEeecCCcEEEEEEcCCCCEEEEEcC-CCcEEEEEeecccccccccccCCCC-CCccccc
Q psy10867        206 DRTCKIFDLCT-----GEDLLSLILDTRLTCVAFDGTEDNIYMGTS-EGVIKSFCLRQVPRTRDHHIQDSTS-NPDFIGH  278 (343)
Q Consensus       206 d~~i~~wd~~~-----~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~-~~~~~~~  278 (343)
                      ++.|.+.|.++     .+.+..+........+.++|||+++++++. +.++.++|+.+......-.+..... ..+.. -
T Consensus       295 gn~V~VID~~t~~~~~~~v~~yIPVGKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~~~~~~~~vvaeve-v  373 (635)
T PRK02888        295 GSKVPVVDGRKAANAGSALTRYVPVPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDGKIKPRDAVVAEPE-L  373 (635)
T ss_pred             CCEEEEEECCccccCCcceEEEEECCCCccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhccCCccceEEEeec-c
Confidence            57899999988     466777778889999999999999888655 8999999998865432211111111 11111 1


Q ss_pred             cCcEEEEEEccCCCEEEEEeCCCcEEEEeccc----------ceeeeecc-cCCceEEEE------EccCCCeeeecc
Q psy10867        279 EKQVTSLSCSITGITLLSSSADETLKIWHTIS----------RQCLRTIQ-HKGPVLGAF------LGLLPPAIHDYD  339 (343)
Q Consensus       279 ~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~----------~~~~~~~~-~~~~v~~~~------~sp~~~~l~~~~  339 (343)
                      .......+|.++|+...|-.-|..|-.||+..          ...+..+. |..+ -.+.      -.|||++|++.+
T Consensus       374 GlGPLHTaFDg~G~aytslf~dsqv~kwn~~~a~~~~~g~~~~~v~~k~dV~y~p-gh~~~~~g~t~~~dgk~l~~~n  450 (635)
T PRK02888        374 GLGPLHTAFDGRGNAYTTLFLDSQIVKWNIEAAIRAYKGEKVDPIVQKLDVHYQP-GHNHASMGETKEADGKWLVSLN  450 (635)
T ss_pred             CCCcceEEECCCCCEEEeEeecceeEEEehHHHHHHhccccCCcceecccCCCcc-ceeeecCCCcCCCCCCEEEEcc
Confidence            23345678999999888889999999999986          34555555 3332 2222      378999988754

>KOG4714|consensus

Probab=99.17  E-value=5.4e-10  Score=82.72  Aligned_cols=163  Identities=13%  Similarity=0.128  Sum_probs=103.2

Q ss_pred             EecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeec
Q psy10867        114 TASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSK  193 (343)
Q Consensus       114 ~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  193 (343)
                      .+..|.++-.+-..+-.++.++++..||.+.+++.+......                     .........-.+.++..
T Consensus        84 ~~a~~sep~p~~~~s~~~t~V~~~~~dg~~~v~s~~~~~~~~---------------------~~i~~~~~~~as~~~~~  142 (319)
T KOG4714|consen   84 VLAKNSEIDPNDACTMTDNRVCIGYADGSLAVFSTDKDLALM---------------------SRIPSIHSGSASRKICR  142 (319)
T ss_pred             eeeccCCCCCcccccccCCceEecCCCceEEEEechHHHhhh---------------------hhcccccccccccceee
Confidence            333444443333344456779999999999999987621111                     00001111112223333


Q ss_pred             CCCceEEEEee-----CCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCC-EEEEEcCCCcEEEEEeecccccccccc
Q psy10867        194 LGAKSRVASVS-----HDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTED-NIYMGTSEGVIKSFCLRQVPRTRDHHI  266 (343)
Q Consensus       194 ~~~~~~l~~~~-----~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~  266 (343)
                      .+  +.+.++.     .-+..+.|+++..+.+..-. ....+.+++-+|..+ .+++|+.||.+.+||.++...+     
T Consensus       143 ~~--~~i~s~~~g~~n~~d~~~a~~~~p~~t~~~~~~~~~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p-----  215 (319)
T KOG4714|consen  143 HG--NSILSGGCGNWNAQDNFYANTLDPIKTLIPSKKALDAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMP-----  215 (319)
T ss_pred             cc--cEEecCCcceEeeccceeeecccccccccccccccccchhhhCCcccccEEEEecCCCeEEEEEcccccch-----
Confidence            33  3343332     12445667665443322222 234499999999655 6677889999999999986433     


Q ss_pred             cCCCCCCccccccCcEEEEEEcc-CCCEEEEEeCCCcEEEEecc
Q psy10867        267 QDSTSNPDFIGHEKQVTSLSCSI-TGITLLSSSADETLKIWHTI  309 (343)
Q Consensus       267 ~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~s~~~dg~i~iwd~~  309 (343)
                           ...+..|+.+++.+-|+| ++..|+++++||.+..||..
T Consensus       216 -----~S~l~ahk~~i~eV~FHpk~p~~Lft~sedGslw~wdas  254 (319)
T KOG4714|consen  216 -----VSLLKAHKAEIWEVHFHPKNPEHLFTCSEDGSLWHWDAS  254 (319)
T ss_pred             -----HHHHHHhhhhhhheeccCCCchheeEecCCCcEEEEcCC
Confidence                 456788999999999999 56799999999999999975

>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=99.15  E-value=2e-07  Score=72.77  Aligned_cols=215  Identities=13%  Similarity=0.082  Sum_probs=139.0

Q ss_pred             CeEEEEecCCceEEEEEecCCCC-cceEEEEeCCceEEEEEcC-----CCeEEEEeCC-CcccceecccCCcceEEEEEC
Q psy10867         15 GAISVWEPKGGTLLMSYKGASVL-SPHSMCLLGNDYVLGVEKG-----KPMIQAWPVN-SQEKAQLRLICPGRISSMQAS   87 (343)
Q Consensus        15 g~i~iwd~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~-----~~~i~iw~~~-~~~~~~~~~~~~~~v~~~~~s   87 (343)
                      -...+||..+++..+.+....+. -.-.-.|++||++|.+...     .|.|-|||.. +.+.+..+..+.-.-..+.+.
T Consensus        28 ~~~~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~~~~~ri~E~~s~GIGPHel~l~  107 (305)
T PF07433_consen   28 TFALVFDCRTGQLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAARGYRRIGEFPSHGIGPHELLLM  107 (305)
T ss_pred             cEEEEEEcCCCceeeEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECcCCcEEEeEecCCCcChhhEEEc
Confidence            45689999999988877654431 1124579999988887654     3899999998 555566666666667788899


Q ss_pred             CCCCEEEEecC--------C-----------eEEEEEccCCceEEE--e--cccCCCeEEEEEecCCCEEEEecCCCe--
Q psy10867         88 PDAAYIAVSIE--------T-----------KLHMWQISSGRLLAT--A--SSHYQPITIVKWSADSNFIVTGGEDGT--  142 (343)
Q Consensus        88 ~~~~~l~~~~d--------~-----------~i~v~~~~~~~~~~~--~--~~~~~~v~~~~~~~~~~~l~s~~~dg~--  142 (343)
                      |||+.|+++..        |           .+...|..+|+.+..  +  .-|...+..+++.++|..++..-..|.  
T Consensus       108 pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~ll~q~~Lp~~~~~lSiRHLa~~~~G~V~~a~Q~qg~~~  187 (305)
T PF07433_consen  108 PDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGALLEQVELPPDLHQLSIRHLAVDGDGTVAFAMQYQGDPG  187 (305)
T ss_pred             CCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecCCCceeeeeecCccccccceeeEEecCCCcEEEEEecCCCCC
Confidence            99977775321        2           266677788887766  4  337778999999999876666544332  


Q ss_pred             -----EEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCC
Q psy10867        143 -----ICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTG  217 (343)
Q Consensus       143 -----i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~  217 (343)
                           |-+++....  ...+.               .+......-...+-+|++++++. ...+|+=..+.+.+||..++
T Consensus       188 ~~~PLva~~~~g~~--~~~~~---------------~p~~~~~~l~~Y~gSIa~~~~g~-~ia~tsPrGg~~~~~d~~tg  249 (305)
T PF07433_consen  188 DAPPLVALHRRGGA--LRLLP---------------APEEQWRRLNGYIGSIAADRDGR-LIAVTSPRGGRVAVWDAATG  249 (305)
T ss_pred             ccCCeEEEEcCCCc--ceecc---------------CChHHHHhhCCceEEEEEeCCCC-EEEEECCCCCEEEEEECCCC
Confidence                 233332221  10000               01111233456789999999983 34456666889999999999


Q ss_pred             ceEEEeecCCcEEEEEEcCCCCEEEEEcCCCcE
Q psy10867        218 EDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVI  250 (343)
Q Consensus       218 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i  250 (343)
                      +.+..... ..+..++-.+++ ++++ +..|.+
T Consensus       250 ~~~~~~~l-~D~cGva~~~~~-f~~s-sG~G~~  279 (305)
T PF07433_consen  250 RLLGSVPL-PDACGVAPTDDG-FLVS-SGQGQL  279 (305)
T ss_pred             CEeecccc-CceeeeeecCCc-eEEe-CCCccE
Confidence            88765543 235556666655 4444 344543

>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1

Probab=99.15  E-value=5.8e-07  Score=71.05  Aligned_cols=269  Identities=15%  Similarity=0.182  Sum_probs=161.0

Q ss_pred             CeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEc----------CCCeEEEEeCCCcccceecccC---C---
Q psy10867         15 GAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEK----------GKPMIQAWPVNSQEKAQLRLIC---P---   78 (343)
Q Consensus        15 g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~----------~~~~i~iw~~~~~~~~~~~~~~---~---   78 (343)
                      +.++|.|..+++.+..+...-.   -.+..+|+++.+.+..          ..-.|.+||..+........-.   .   
T Consensus        17 ~rv~viD~d~~k~lGmi~~g~~---~~~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~k~R~~~   93 (342)
T PF06433_consen   17 SRVYVIDADSGKLLGMIDTGFL---GNVALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPPKPRAQV   93 (342)
T ss_dssp             EEEEEEETTTTEEEEEEEEESS---EEEEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETTS-B--B
T ss_pred             ceEEEEECCCCcEEEEeecccC---CceeECCCCCEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCCcchhee
Confidence            5899999999999888876543   4477899997766532          2247999999987665322211   1   


Q ss_pred             -cceEEEEECCCCCEEEEe---cCCeEEEEEccCCceEEEecccCCCeEEEEEec-CCCEEEEecCCCeEEEeecCc-cc
Q psy10867         79 -GRISSMQASPDAAYIAVS---IETKLHMWQISSGRLLATASSHYQPITIVKWSA-DSNFIVTGGEDGTICVWQLSR-LI  152 (343)
Q Consensus        79 -~~v~~~~~s~~~~~l~~~---~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~-~~  152 (343)
                       .....++++.|++++...   =...|.|.|+..++.+..+... + +..+  .| ..+-+.+-+.||.+.-..+.. ++
T Consensus        94 ~~~~~~~~ls~dgk~~~V~N~TPa~SVtVVDl~~~kvv~ei~~P-G-C~~i--yP~~~~~F~~lC~DGsl~~v~Ld~~Gk  169 (342)
T PF06433_consen   94 VPYKNMFALSADGKFLYVQNFTPATSVTVVDLAAKKVVGEIDTP-G-CWLI--YPSGNRGFSMLCGDGSLLTVTLDADGK  169 (342)
T ss_dssp             S--GGGEEE-TTSSEEEEEEESSSEEEEEEETTTTEEEEEEEGT-S-EEEE--EEEETTEEEEEETTSCEEEEEETSTSS
T ss_pred             cccccceEEccCCcEEEEEccCCCCeEEEEECCCCceeeeecCC-C-EEEE--EecCCCceEEEecCCceEEEEECCCCC
Confidence             122346788999988873   3568999999999888777532 2 2222  23 224577888899998888874 33


Q ss_pred             eeeeeecCCCCCCCCccccccceeeeecccccce-EEEEeecCCCceEEEEeeCCCeEEEEecCCCceEE--Eeec----
Q psy10867        153 CKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPV-THVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLL--SLIL----  225 (343)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~--~~~~----  225 (343)
                      ....                  ....+.....++ ..-++...+  ..++--+.+|.|+--|+.......  .+..    
T Consensus       170 ~~~~------------------~t~~F~~~~dp~f~~~~~~~~~--~~~~F~Sy~G~v~~~dlsg~~~~~~~~~~~~t~~  229 (342)
T PF06433_consen  170 EAQK------------------STKVFDPDDDPLFEHPAYSRDG--GRLYFVSYEGNVYSADLSGDSAKFGKPWSLLTDA  229 (342)
T ss_dssp             EEEE------------------EEEESSTTTS-B-S--EEETTT--TEEEEEBTTSEEEEEEETTSSEEEEEEEESS-HH
T ss_pred             EeEe------------------eccccCCCCcccccccceECCC--CeEEEEecCCEEEEEeccCCcccccCcccccCcc
Confidence            2211                  111222222222 233344443  345557788999888886554322  2211    


Q ss_pred             -------CCcEEEEEEcCCCCEEEEEcC--------CC--cEEEEEeecccccccccccCCCCCCccccccCcEEEEEEc
Q psy10867        226 -------DTRLTCVAFDGTEDNIYMGTS--------EG--VIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCS  288 (343)
Q Consensus       226 -------~~~i~~~~~~~~~~~l~~~~~--------d~--~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s  288 (343)
                             ++...-+++++..+.|++--.        ++  .|.++|+.+.++...           +.. ..++.+|..+
T Consensus       230 e~~~~WrPGG~Q~~A~~~~~~rlyvLMh~g~~gsHKdpgteVWv~D~~t~krv~R-----------i~l-~~~~~Si~Vs  297 (342)
T PF06433_consen  230 EKADGWRPGGWQLIAYHAASGRLYVLMHQGGEGSHKDPGTEVWVYDLKTHKRVAR-----------IPL-EHPIDSIAVS  297 (342)
T ss_dssp             HHHTTEEE-SSS-EEEETTTTEEEEEEEE--TT-TTS-EEEEEEEETTTTEEEEE-----------EEE-EEEESEEEEE
T ss_pred             ccccCcCCcceeeeeeccccCeEEEEecCCCCCCccCCceEEEEEECCCCeEEEE-----------EeC-CCccceEEEc
Confidence                   223455788887776666321        12  467777776555432           221 3457789999


Q ss_pred             cCCC-EEEEE-eCCCcEEEEecccceeeeecccCCc
Q psy10867        289 ITGI-TLLSS-SADETLKIWHTISRQCLRTIQHKGP  322 (343)
Q Consensus       289 ~~~~-~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~~  322 (343)
                      .+.+ +|++. ..++.+.+||..+|+.+++++.-+.
T Consensus       298 qd~~P~L~~~~~~~~~l~v~D~~tGk~~~~~~~lG~  333 (342)
T PF06433_consen  298 QDDKPLLYALSAGDGTLDVYDAATGKLVRSIEQLGE  333 (342)
T ss_dssp             SSSS-EEEEEETTTTEEEEEETTT--EEEEE---SS
T ss_pred             cCCCcEEEEEcCCCCeEEEEeCcCCcEEeehhccCC
Confidence            8776 55544 4578999999999999999884443

4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....

>KOG0882|consensus

Probab=99.13  E-value=3.5e-09  Score=84.51  Aligned_cols=258  Identities=12%  Similarity=0.053  Sum_probs=173.3

Q ss_pred             CCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCC---cccceecccCCcceEEEEECCCCCEEEE-ec-CCeEEEEEccC
Q psy10867         34 ASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNS---QEKAQLRLICPGRISSMQASPDAAYIAV-SI-ETKLHMWQISS  108 (343)
Q Consensus        34 ~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~---~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~-d~~i~v~~~~~  108 (343)
                      |.+ .|+.+..+. ..++..++-||.++.|.-..   -+.+..+..|...|.+++.+-++.++++ +. |..++++|+++
T Consensus         8 hrd-~i~hv~~tk-a~fiiqASlDGh~KFWkKs~isGvEfVKhFraHL~~I~sl~~S~dg~L~~Sv~d~Dhs~KvfDvEn   85 (558)
T KOG0882|consen    8 HRD-VITHVFPTK-AKFIIQASLDGHKKFWKKSRISGVEFVKHFRAHLGVILSLAVSYDGWLFRSVEDPDHSVKVFDVEN   85 (558)
T ss_pred             ccc-eeeeEeeeh-hheEEeeecchhhhhcCCCCccceeehhhhHHHHHHHHhhhccccceeEeeccCcccceeEEEeec
Confidence            444 555554443 45666666669999997544   2333555688899999999999998888 55 88999999987


Q ss_pred             CceEEEec--ccCCCeEEEEEecCC----CEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeeccc
Q psy10867        109 GRLLATAS--SHYQPITIVKWSADS----NFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQH  182 (343)
Q Consensus       109 ~~~~~~~~--~~~~~v~~~~~~~~~----~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (343)
                      -..+.-++  --.+.+.. ..+ .|    ..-++.-.++.+.++|-....+                    +......-|
T Consensus        86 ~DminmiKL~~lPg~a~w-v~s-kGd~~s~IAVs~~~sg~i~VvD~~~d~~--------------------q~~~fkklH  143 (558)
T KOG0882|consen   86 FDMINMIKLVDLPGFAEW-VTS-KGDKISLIAVSLFKSGKIFVVDGFGDFC--------------------QDGYFKKLH  143 (558)
T ss_pred             cchhhhcccccCCCceEE-ecC-CCCeeeeEEeecccCCCcEEECCcCCcC--------------------ccceecccc
Confidence            65443222  12222211 112 23    2223334678899999776532                    133444569


Q ss_pred             ccceEEEEeecCCCceEEEEeeCCCeEEEEecCC------CceEEEee----------cCCcEEEEEEcCCCCEEEEEcC
Q psy10867        183 SLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCT------GEDLLSLI----------LDTRLTCVAFDGTEDNIYMGTS  246 (343)
Q Consensus       183 ~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~------~~~~~~~~----------~~~~i~~~~~~~~~~~l~~~~~  246 (343)
                      ..+|..+.+.+.+  ..+++....|.|.-|..+.      .+....++          ......++.|+|++..+.+-..
T Consensus       144 ~sPV~~i~y~qa~--Ds~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g~qistl~~  221 (558)
T KOG0882|consen  144 FSPVKKIRYNQAG--DSAVSIDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPDGAQISTLNP  221 (558)
T ss_pred             cCceEEEEeeccc--cceeeccccceeEeecCCCcccCccccccccccccchhhcccccccCccceEEccccCcccccCc
Confidence            9999999999999  7889999999999998762      22222222          2345789999999999999999


Q ss_pred             CCcEEEEEeecccccccccccCCCC---------------------CCccccccC-cEEEEEEccCCCEEEEEeCCCcEE
Q psy10867        247 EGVIKSFCLRQVPRTRDHHIQDSTS---------------------NPDFIGHEK-QVTSLSCSITGITLLSSSADETLK  304 (343)
Q Consensus       247 d~~i~i~d~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~-~v~~~~~s~~~~~l~s~~~dg~i~  304 (343)
                      |..|++++++++...+++.-.....                     ...+..|.. .-+.+.|...+++|+-++-=| |+
T Consensus       222 DrkVR~F~~KtGklvqeiDE~~t~~~~q~ks~y~l~~VelgRRmaverelek~~~~~~~~~~fdes~~flly~t~~g-ik  300 (558)
T KOG0882|consen  222 DRKVRGFVFKTGKLVQEIDEVLTDAQYQPKSPYGLMHVELGRRMAVERELEKHGSTVGTNAVFDESGNFLLYGTILG-IK  300 (558)
T ss_pred             ccEEEEEEeccchhhhhhhccchhhhhccccccccceeehhhhhhHHhhHhhhcCcccceeEEcCCCCEEEeeccee-EE
Confidence            9999999999887666543211000                     001112222 235677888999999888765 89


Q ss_pred             EEecccceeeeecc
Q psy10867        305 IWHTISRQCLRTIQ  318 (343)
Q Consensus       305 iwd~~~~~~~~~~~  318 (343)
                      +.++.++++.+.+.
T Consensus       301 vin~~tn~v~ri~g  314 (558)
T KOG0882|consen  301 VINLDTNTVVRILG  314 (558)
T ss_pred             EEEeecCeEEEEec
Confidence            99999888777664

>KOG2695|consensus

Probab=99.11  E-value=4.9e-10  Score=86.25  Aligned_cols=162  Identities=12%  Similarity=0.109  Sum_probs=119.4

Q ss_pred             EEeC--CceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCC-----ceEEE
Q psy10867         43 CLLG--NDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQISSG-----RLLAT  114 (343)
Q Consensus        43 ~~~~--~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~-----~~~~~  114 (343)
                      +|+-  .+..+++|.+ ..+-+-|++++-... + ...+.|.++.|...++++.. +.+|.|..+|++.+     .+.+.
T Consensus       218 awSlni~gyhfs~G~s-qqv~L~nvetg~~qs-f-~sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~r  294 (425)
T KOG2695|consen  218 AWSLNIMGYHFSVGLS-QQVLLTNVETGHQQS-F-QSKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQR  294 (425)
T ss_pred             hhhhccceeeeccccc-ceeEEEEeecccccc-c-ccchhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceEE
Confidence            5553  3455556665 688899998876443 2 35678999999987777775 68999999999865     33333


Q ss_pred             ecccCCCeEEEEEec-CCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeec
Q psy10867        115 ASSHYQPITIVKWSA-DSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSK  193 (343)
Q Consensus       115 ~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  193 (343)
                      + -|...|+++.... ++++|++.+.+|+|++||++..++..                   .+..+.+|-..-.-+-+.-
T Consensus       295 l-yh~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~-------------------~V~qYeGHvN~~a~l~~~v  354 (425)
T KOG2695|consen  295 L-YHDSSVTSLQILQFSQQKLMASDMTGKIKLYDLRATKCKK-------------------SVMQYEGHVNLSAYLPAHV  354 (425)
T ss_pred             E-EcCcchhhhhhhccccceEeeccCcCceeEeeehhhhccc-------------------ceeeeeccccccccccccc
Confidence            3 4888999998877 77889999999999999999765422                   3566677765444443332


Q ss_pred             CCCceEEEEeeCCCeEEEEecCCCceEEEeecCC
Q psy10867        194 LGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDT  227 (343)
Q Consensus       194 ~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~  227 (343)
                      +.++..+++++.|...|+|.++.++.+.++..+.
T Consensus       355 ~~eeg~I~s~GdDcytRiWsl~~ghLl~tipf~~  388 (425)
T KOG2695|consen  355 KEEEGSIFSVGDDCYTRIWSLDSGHLLCTIPFPY  388 (425)
T ss_pred             ccccceEEEccCeeEEEEEecccCceeeccCCCC
Confidence            2223688899999999999999999998887543

>KOG3617|consensus

Probab=99.07  E-value=1.3e-08  Score=87.84  Aligned_cols=293  Identities=13%  Similarity=0.169  Sum_probs=169.9

Q ss_pred             EEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEEC
Q psy10867          8 AFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQAS   87 (343)
Q Consensus         8 ~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s   87 (343)
                      .|||...|.|.||- ++|++.+...-.-  .+++++|+|...+++.|..-|.+.+|...+.+.......|+.+|..+.||
T Consensus        34 ~fS~er~GSVtIfa-dtGEPqr~Vt~P~--hatSLCWHpe~~vLa~gwe~g~~~v~~~~~~e~htv~~th~a~i~~l~wS  110 (1416)
T KOG3617|consen   34 SFSPERGGSVTIFA-DTGEPQRDVTYPV--HATSLCWHPEEFVLAQGWEMGVSDVQKTNTTETHTVVETHPAPIQGLDWS  110 (1416)
T ss_pred             EecCCCCceEEEEe-cCCCCCcccccce--ehhhhccChHHHHHhhccccceeEEEecCCceeeeeccCCCCCceeEEec
Confidence            47788889999985 5777655443322  45789999999999999998999999998888777777999999999999


Q ss_pred             CCCCEEEEe-cCCeEEEEEccCCceEEEec--cc--CCCeE--EEEEecCCC------EEEEecCCCeEE-EeecCccce
Q psy10867         88 PDAAYIAVS-IETKLHMWQISSGRLLATAS--SH--YQPIT--IVKWSADSN------FIVTGGEDGTIC-VWQLSRLIC  153 (343)
Q Consensus        88 ~~~~~l~~~-~d~~i~v~~~~~~~~~~~~~--~~--~~~v~--~~~~~~~~~------~l~s~~~dg~i~-iwd~~~~~~  153 (343)
                      |+|..|.++ .-|.+.+|....-..++...  .|  ...++  |...++++.      ..+..+.+..+- .++.+....
T Consensus       111 ~~G~~l~t~d~~g~v~lwr~d~~g~~q~~~~~~hel~~~ltl~cfRL~~~~Ee~~~laKaaVtgDe~alD~~fnwk~~~a  190 (1416)
T KOG3617|consen  111 HDGTVLMTLDNPGSVHLWRYDVIGEIQTSNIMQHELNDQLTLWCFRLSYDREEKFKLAKAAVTGDESALDEPFNWKESLA  190 (1416)
T ss_pred             CCCCeEEEcCCCceeEEEEeeeccccccchhhhhHhhceeeEEEEecCCChHHhhhhhhhhccCchhhhcccccCccchh
Confidence            999999986 45899999876432222211  22  12233  344455532      123333333332 333221100


Q ss_pred             eeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCCcEEEEE
Q psy10867        154 KQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVA  233 (343)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~  233 (343)
                      .+                       ...|.       -.|+|  ..++.++.+|+|+-.| +.|+.......++. ..+.
T Consensus       191 ~r-----------------------s~~ks-------gv~~g--~~F~~~~~~GtVyyvd-q~g~~~~V~k~dS~-vQmL  236 (1416)
T KOG3617|consen  191 ER-----------------------SDEKS-------GVPKG--TEFLFAGKSGTVYYVD-QNGRQRTVHKLDSE-VQML  236 (1416)
T ss_pred             hc-----------------------ccccc-------CCCCC--cEEEEEcCCceEEEEc-CCCcEEEEEEccch-HHHH
Confidence            00                       00011       13555  6788888999998887 45555544443332 1222


Q ss_pred             EcCCCCEEEEEcCCCcEEEEEeeccccccc----------------cc------ccCCCCCCccccccCcEEEEEEccCC
Q psy10867        234 FDGTEDNIYMGTSEGVIKSFCLRQVPRTRD----------------HH------IQDSTSNPDFIGHEKQVTSLSCSITG  291 (343)
Q Consensus       234 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~----------------~~------~~~~~~~~~~~~~~~~v~~~~~s~~~  291 (343)
                      |.+...-+.+-..+-++.++-........+                +.      +....+...+ .....+++++++..+
T Consensus       237 f~~~~eai~~i~e~lr~~l~~v~~~G~~ee~~~vk~sgk~GgrqGgiA~sEssGvLr~~eKyg~-e~ge~~~c~cY~~~~  315 (1416)
T KOG3617|consen  237 FMGYCEAISIIIEFLRDCLIFVLAKGTSEERCAVKVSGKLGGRQGGIACSESSGVLRKSEKYGL-ELGEGILCMCYGEKE  315 (1416)
T ss_pred             HhcccceEEEEeeeceeeEEEecCCCchHHhhhhhhccccCCccCccccccccccccCCcchhh-hcCCceEEEEEeccc
Confidence            333222222222222222221111000000                00      0000000111 123568999999999


Q ss_pred             CEEEEEeCCCcEEEEecccc-------eeeeecc----cCCceEEEEEccCCCeeeec
Q psy10867        292 ITLLSSSADETLKIWHTISR-------QCLRTIQ----HKGPVLGAFLGLLPPAIHDY  338 (343)
Q Consensus       292 ~~l~s~~~dg~i~iwd~~~~-------~~~~~~~----~~~~v~~~~~sp~~~~l~~~  338 (343)
                      ..|+.|...|.+.+|--...       .-..++.    ..+.|+.+.|.|-...++.-
T Consensus       316 ~~l~agt~~gnv~~w~~v~~~f~g~p~~d~w~l~~~~e~~g~I~~i~Wg~~k~~~avn  373 (1416)
T KOG3617|consen  316 IRLWAGTKEGNVTIWLDVNKGFQGDPTIDVWTLNGKRESLGKISLIRWGPIKSTAAVN  373 (1416)
T ss_pred             eEEEecccCCcEEEeeecCccccCCCCcceEEecCchhhccceEEEEeccccchhhhh
Confidence            99999999999999963221       2223332    56789999999966655443

>KOG0882|consensus

Probab=99.07  E-value=1.4e-09  Score=86.74  Aligned_cols=222  Identities=12%  Similarity=0.089  Sum_probs=152.5

Q ss_pred             cCCcceEEEEECCCCCEEEEecCCeEEEEEccC--C-ceEEEecccCCCeEEEEEecCCCEEEEecC-CCeEEEeecCcc
Q psy10867         76 ICPGRISSMQASPDAAYIAVSIETKLHMWQISS--G-RLLATASSHYQPITIVKWSADSNFIVTGGE-DGTICVWQLSRL  151 (343)
Q Consensus        76 ~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~--~-~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-dg~i~iwd~~~~  151 (343)
                      -|.+.|+.+..+...-.+-++.||.++.|--..  | +.+..+..|.+.+.+++.+.++..+.+.+. |..++++|+.+.
T Consensus         7 mhrd~i~hv~~tka~fiiqASlDGh~KFWkKs~isGvEfVKhFraHL~~I~sl~~S~dg~L~~Sv~d~Dhs~KvfDvEn~   86 (558)
T KOG0882|consen    7 MHRDVITHVFPTKAKFIIQASLDGHKKFWKKSRISGVEFVKHFRAHLGVILSLAVSYDGWLFRSVEDPDHSVKVFDVENF   86 (558)
T ss_pred             cccceeeeEeeehhheEEeeecchhhhhcCCCCccceeehhhhHHHHHHHHhhhccccceeEeeccCcccceeEEEeecc
Confidence            467778877665443344458999999998532  1 344556788899999999999999999887 999999999876


Q ss_pred             ceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCc-eEEEEeeCCCeEEEEecCCCce-EEEe--ecCC
Q psy10867        152 ICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAK-SRVASVSHDRTCKIFDLCTGED-LLSL--ILDT  227 (343)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~l~~~~~d~~i~~wd~~~~~~-~~~~--~~~~  227 (343)
                      .....+.                    +..-.+.+.. ..++...- .+.++.-.++.+.++|-....+ ...+  .|.+
T Consensus        87 DminmiK--------------------L~~lPg~a~w-v~skGd~~s~IAVs~~~sg~i~VvD~~~d~~q~~~fkklH~s  145 (558)
T KOG0882|consen   87 DMINMIK--------------------LVDLPGFAEW-VTSKGDKISLIAVSLFKSGKIFVVDGFGDFCQDGYFKKLHFS  145 (558)
T ss_pred             chhhhcc--------------------cccCCCceEE-ecCCCCeeeeEEeecccCCCcEEECCcCCcCccceecccccC
Confidence            4432221                    1111122211 12222110 2233344578999999765542 2222  2788


Q ss_pred             cEEEEEEcCCCCEEEEEcCCCcEEEEEeec-cccc---ccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcE
Q psy10867        228 RLTCVAFDGTEDNIYMGTSEGVIKSFCLRQ-VPRT---RDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETL  303 (343)
Q Consensus       228 ~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~-~~~~---~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i  303 (343)
                      +|..+.+.|.+..+++....|.|.-|.... .+.+   ..+.......+..+.......+++.|+|++..+.+-+.|..|
T Consensus       146 PV~~i~y~qa~Ds~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g~qistl~~DrkV  225 (558)
T KOG0882|consen  146 PVKKIRYNQAGDSAVSIDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPDGAQISTLNPDRKV  225 (558)
T ss_pred             ceEEEEeeccccceeeccccceeEeecCCCcccCccccccccccccchhhcccccccCccceEEccccCcccccCcccEE
Confidence            999999999999999999999999998874 1111   112222233344555566778999999999999999999999


Q ss_pred             EEEecccceeeeecc
Q psy10867        304 KIWHTISRQCLRTIQ  318 (343)
Q Consensus       304 ~iwd~~~~~~~~~~~  318 (343)
                      ++++..+|+.++.++
T Consensus       226 R~F~~KtGklvqeiD  240 (558)
T KOG0882|consen  226 RGFVFKTGKLVQEID  240 (558)
T ss_pred             EEEEeccchhhhhhh
Confidence            999999998776653

>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=99.03  E-value=1.1e-09  Score=58.65  Aligned_cols=39  Identities=41%  Similarity=0.836  Sum_probs=36.7

Q ss_pred             CceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEee
Q psy10867        109 GRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQ  147 (343)
Q Consensus       109 ~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd  147 (343)
                      ++++..+.+|.+.|.+++|+|++++|++++.|+.|++||
T Consensus         1 g~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd   39 (39)
T PF00400_consen    1 GKCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD   39 (39)
T ss_dssp             EEEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred             CeEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence            357889999999999999999999999999999999997

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....

>KOG1275|consensus

Probab=99.01  E-value=1.3e-08  Score=88.34  Aligned_cols=181  Identities=13%  Similarity=0.197  Sum_probs=135.8

Q ss_pred             EEEEecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCcccc
Q psy10867         92 YIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTG  171 (343)
Q Consensus        92 ~l~~~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  171 (343)
                      ++.++-...+..+|+++.+..+...-..+.|.-|+.  +++.+.+|...|+|.+-|.++.+                   
T Consensus       150 ~i~Gg~Q~~li~~Dl~~~~e~r~~~v~a~~v~imR~--Nnr~lf~G~t~G~V~LrD~~s~~-------------------  208 (1118)
T KOG1275|consen  150 LIMGGLQEKLIHIDLNTEKETRTTNVSASGVTIMRY--NNRNLFCGDTRGTVFLRDPNSFE-------------------  208 (1118)
T ss_pred             eeecchhhheeeeecccceeeeeeeccCCceEEEEe--cCcEEEeecccceEEeecCCcCc-------------------
Confidence            344455667888899888877766544545655554  68899999999999999999864                   


Q ss_pred             ccceeeeecccccceEEEEeecCCCceEEEEeeC---------CCeEEEEecCCCceEEEeecCCcEEEEEEcCCC-CEE
Q psy10867        172 LTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSH---------DRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTE-DNI  241 (343)
Q Consensus       172 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~---------d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~-~~l  241 (343)
                         .++.+..|.+.|..+....    ++|++++.         |.-|+|||++..+.+.-+.......-+.|.|.- ..+
T Consensus       209 ---~iht~~aHs~siSDfDv~G----NlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~~~~~P~flrf~Psl~t~~  281 (1118)
T KOG1275|consen  209 ---TIHTFDAHSGSISDFDVQG----NLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQFPYGPQFLRFHPSLTTRL  281 (1118)
T ss_pred             ---eeeeeeccccceeeeeccC----CeEEEeecccccccccccchhhhhhhhhhhccCCcccccCchhhhhcccccceE
Confidence               6677789999998877654    56777654         556899999998888777766666777888864 578


Q ss_pred             EEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEe
Q psy10867        242 YMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWH  307 (343)
Q Consensus       242 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd  307 (343)
                      ++.+..|...+-|..+...+...       +..+......+..+++|++++.||.|..+|.|.+|.
T Consensus       282 ~V~S~sGq~q~vd~~~lsNP~~~-------~~~v~p~~s~i~~fDiSsn~~alafgd~~g~v~~wa  340 (1118)
T KOG1275|consen  282 AVTSQSGQFQFVDTATLSNPPAG-------VKMVNPNGSGISAFDISSNGDALAFGDHEGHVNLWA  340 (1118)
T ss_pred             EEEecccceeeccccccCCCccc-------eeEEccCCCcceeEEecCCCceEEEecccCcEeeec
Confidence            88889999999995544332211       122223344589999999999999999999999997

>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]

Probab=98.99  E-value=7.4e-09  Score=78.90  Aligned_cols=196  Identities=12%  Similarity=0.141  Sum_probs=129.6

Q ss_pred             CCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeeccc------------ccce
Q psy10867        119 YQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQH------------SLPV  186 (343)
Q Consensus       119 ~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~v  186 (343)
                      ...|+++.|...|.++++|...|.|.+|.-.... .....                ....+.+|            ...|
T Consensus        26 ad~ItaVefd~tg~YlatGDkgGRVvlfer~~s~-~ceyk----------------f~teFQshe~EFDYLkSleieEKi   88 (460)
T COG5170          26 ADKITAVEFDETGLYLATGDKGGRVVLFEREKSY-GCEYK----------------FFTEFQSHELEFDYLKSLEIEEKI   88 (460)
T ss_pred             cceeeEEEeccccceEeecCCCceEEEeeccccc-ccchh----------------hhhhhcccccchhhhhhccHHHHh
Confidence            4568999999999999999999999999765432 00000                11111222            3457


Q ss_pred             EEEEeecCCCceEEEEeeCCCeEEEEecCCCce-------------------E-----------------------EEe-
Q psy10867        187 THVTLSKLGAKSRVASVSHDRTCKIFDLCTGED-------------------L-----------------------LSL-  223 (343)
Q Consensus       187 ~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~-------------------~-----------------------~~~-  223 (343)
                      ..+.|..++....++..+.|.+|++|.+.....                   +                       +.+ 
T Consensus        89 n~I~w~~~t~r~hFLlstNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvya  168 (460)
T COG5170          89 NAIEWFDDTGRNHFLLSTNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYA  168 (460)
T ss_pred             hheeeecCCCcceEEEecCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceecc
Confidence            888888766556777888999999998854210                   0                       000 


Q ss_pred             -ecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccc-----cCcEEEEEEccCC-CEEEE
Q psy10867        224 -ILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGH-----EKQVTSLSCSITG-ITLLS  296 (343)
Q Consensus       224 -~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~-----~~~v~~~~~s~~~-~~l~s  296 (343)
                       .|.--+.++.|+.|...++++ .|-+|.+|++.-......        +..++.|     ..-|++..|+|.. ..+.-
T Consensus       169 NaH~yhiNSiS~NsD~et~lSa-DdLrINLWnl~i~D~sFn--------IVDiKP~nmeeLteVItSaeFhp~~cn~fmY  239 (460)
T COG5170         169 NAHPYHINSISFNSDKETLLSA-DDLRINLWNLEIIDGSFN--------IVDIKPHNMEELTEVITSAEFHPEMCNVFMY  239 (460)
T ss_pred             ccceeEeeeeeecCchheeeec-cceeeeeccccccCCceE--------EEeccCccHHHHHHHHhhcccCHhHcceEEE
Confidence             133347788898888777765 578899998876443222        1122223     3458888999964 46667


Q ss_pred             EeCCCcEEEEeccccee------eee----------cc-cCCceEEEEEccCCCeeeeccc
Q psy10867        297 SSADETLKIWHTISRQC------LRT----------IQ-HKGPVLGAFLGLLPPAIHDYDF  340 (343)
Q Consensus       297 ~~~dg~i~iwd~~~~~~------~~~----------~~-~~~~v~~~~~sp~~~~l~~~~~  340 (343)
                      .+..|.|++-|++...+      +..          +. ....|..+.|+++|+++++-+|
T Consensus       240 SsSkG~Ikl~DlRq~alcdn~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRdy  300 (460)
T COG5170         240 SSSKGEIKLNDLRQSALCDNSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRDY  300 (460)
T ss_pred             ecCCCcEEehhhhhhhhccCchhhhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEecc
Confidence            77889999999973211      111          11 2356889999999999998765

>KOG1832|consensus

Probab=98.96  E-value=9.6e-10  Score=94.98  Aligned_cols=216  Identities=15%  Similarity=0.135  Sum_probs=153.3

Q ss_pred             eecccCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCC--eEEEeec
Q psy10867         72 QLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDG--TICVWQL  148 (343)
Q Consensus        72 ~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg--~i~iwd~  148 (343)
                      +.+..|....+|++|+-+.++|+. ...|.|++|++.+|........|..+|+-+.-+.+|..+++.+.-.  -..+|++
T Consensus      1095 ~~frd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~PlsaLW~~ 1174 (1516)
T KOG1832|consen 1095 RSFRDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLSALWDA 1174 (1516)
T ss_pred             hhhhccccceeeEEeecCCceEEeeeccceEEEEEccCccccccccccccccccccccCCcceeeeeccccCchHHHhcc
Confidence            345577788999999998888887 5789999999999999999999999999999888998777765433  3678988


Q ss_pred             CccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeec---
Q psy10867        149 SRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLIL---  225 (343)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~---  225 (343)
                      .+.-                     .+.+.+    ..-.++.|+...  ..-+.|+.-....+||++++..+.++-.   
T Consensus      1175 ~s~~---------------------~~~Hsf----~ed~~vkFsn~~--q~r~~gt~~d~a~~YDvqT~~~l~tylt~~~ 1227 (1516)
T KOG1832|consen 1175 SSTG---------------------GPRHSF----DEDKAVKFSNSL--QFRALGTEADDALLYDVQTCSPLQTYLTDTV 1227 (1516)
T ss_pred             cccc---------------------Cccccc----cccceeehhhhH--HHHHhcccccceEEEecccCcHHHHhcCcch
Confidence            7521                     122222    234577887765  4445555667789999999988766431   


Q ss_pred             --CCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcE
Q psy10867        226 --DTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETL  303 (343)
Q Consensus       226 --~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i  303 (343)
                        .-.-+...|+|+.++++-   ||  .+||.+..+....           |...+..+ .=.|+|.|..++.-++    
T Consensus      1228 ~~~y~~n~a~FsP~D~LIln---dG--vLWDvR~~~aIh~-----------FD~ft~~~-~G~FHP~g~eVIINSE---- 1286 (1516)
T KOG1832|consen 1228 TSSYSNNLAHFSPCDTLILN---DG--VLWDVRIPEAIHR-----------FDQFTDYG-GGGFHPSGNEVIINSE---- 1286 (1516)
T ss_pred             hhhhhccccccCCCcceEee---Cc--eeeeeccHHHHhh-----------hhhheecc-cccccCCCceEEeech----
Confidence              222367889999888773   55  4899998654332           22222111 2258999998888764    


Q ss_pred             EEEecccceeeeecccCCceEEEEEccCCCeeee
Q psy10867        304 KIWHTISRQCLRTIQHKGPVLGAFLGLLPPAIHD  337 (343)
Q Consensus       304 ~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~  337 (343)
                       |||+++.+.++....-+ -..+.|+..|..+++
T Consensus      1287 -IwD~RTF~lLh~VP~Ld-qc~VtFNstG~VmYa 1318 (1516)
T KOG1832|consen 1287 -IWDMRTFKLLHSVPSLD-QCAVTFNSTGDVMYA 1318 (1516)
T ss_pred             -hhhhHHHHHHhcCcccc-ceEEEeccCccchhh
Confidence             89999988887765222 245778887776654

>KOG1275|consensus

Probab=98.95  E-value=2.3e-08  Score=86.80  Aligned_cols=179  Identities=12%  Similarity=0.150  Sum_probs=131.9

Q ss_pred             eEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEEe-cCCeEEEEEccCCceEEEecccCCCeEEEEE
Q psy10867         49 YVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVS-IETKLHMWQISSGRLLATASSHYQPITIVKW  127 (343)
Q Consensus        49 ~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~  127 (343)
                      .++.+|-. ..+..+|+.+.+..+........|.-++.  +++++.+| ..|+|.+-|+++.+.++++..|++.|.++..
T Consensus       149 ~~i~Gg~Q-~~li~~Dl~~~~e~r~~~v~a~~v~imR~--Nnr~lf~G~t~G~V~LrD~~s~~~iht~~aHs~siSDfDv  225 (1118)
T KOG1275|consen  149 TLIMGGLQ-EKLIHIDLNTEKETRTTNVSASGVTIMRY--NNRNLFCGDTRGTVFLRDPNSFETIHTFDAHSGSISDFDV  225 (1118)
T ss_pred             ceeecchh-hheeeeecccceeeeeeeccCCceEEEEe--cCcEEEeecccceEEeecCCcCceeeeeeccccceeeeec
Confidence            44555555 57778898888777665544445666664  56777764 6899999999999999999999999987766


Q ss_pred             ecCCCEEEEecC---------CCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCce
Q psy10867        128 SADSNFIVTGGE---------DGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKS  198 (343)
Q Consensus       128 ~~~~~~l~s~~~---------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~  198 (343)
                        .|+.|++++.         |.-|++||++..+.+..+.                   .   +.+ ..-+.|.|.-. .
T Consensus       226 --~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~-------------------~---~~~-P~flrf~Psl~-t  279 (1118)
T KOG1275|consen  226 --QGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQ-------------------F---PYG-PQFLRFHPSLT-T  279 (1118)
T ss_pred             --cCCeEEEeecccccccccccchhhhhhhhhhhccCCcc-------------------c---ccC-chhhhhccccc-c
Confidence              6889999875         5568999999876544222                   1   222 24577888765 6


Q ss_pred             EEEEeeCCCeEEEEe---cCCCce-EEEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEee
Q psy10867        199 RVASVSHDRTCKIFD---LCTGED-LLSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLR  256 (343)
Q Consensus       199 ~l~~~~~d~~i~~wd---~~~~~~-~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~  256 (343)
                      .++.++..|...+-|   +.+... +..+. ..+.+..++++++++.++.|..+|.|.+|.-+
T Consensus       280 ~~~V~S~sGq~q~vd~~~lsNP~~~~~~v~p~~s~i~~fDiSsn~~alafgd~~g~v~~wa~~  342 (1118)
T KOG1275|consen  280 RLAVTSQSGQFQFVDTATLSNPPAGVKMVNPNGSGISAFDISSNGDALAFGDHEGHVNLWADR  342 (1118)
T ss_pred             eEEEEecccceeeccccccCCCccceeEEccCCCcceeEEecCCCceEEEecccCcEeeecCC
Confidence            788889999999998   333321 22222 35569999999999999999999999999733

>KOG2066|consensus

Probab=98.93  E-value=6.7e-08  Score=82.89  Aligned_cols=171  Identities=17%  Similarity=0.150  Sum_probs=127.2

Q ss_pred             CCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceE
Q psy10867        120 QPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSR  199 (343)
Q Consensus       120 ~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~  199 (343)
                      ..++|++++  ++.|+-|+.+|.|++.+....                       + .....|...      ..+|  .+
T Consensus        40 D~is~~av~--~~~~~~GtH~g~v~~~~~~~~-----------------------~-~~~~~~s~~------~~~G--ey   85 (846)
T KOG2066|consen   40 DAISCCAVH--DKFFALGTHRGAVYLTTCQGN-----------------------P-KTNFDHSSS------ILEG--EY   85 (846)
T ss_pred             hHHHHHHhh--cceeeeccccceEEEEecCCc-----------------------c-ccccccccc------ccCC--ce
Confidence            456677775  678999999999999998764                       1 222223332      4455  89


Q ss_pred             EEEeeCCCeEEEEecCCCceEEEeecCCcEEEEEEcCC-----CCEEEEEcCCCcEEEEEeecccccccccccCCCCCCc
Q psy10867        200 VASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGT-----EDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPD  274 (343)
Q Consensus       200 l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~-----~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~  274 (343)
                      +++++.||++.+-.+-+.+...++....++.+++++|+     .+.+++|+.-| +.++.-+-.....         ...
T Consensus        86 ~asCS~DGkv~I~sl~~~~~~~~~df~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~---------~v~  155 (846)
T KOG2066|consen   86 VASCSDDGKVVIGSLFTDDEITQYDFKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKD---------SVV  155 (846)
T ss_pred             EEEecCCCcEEEeeccCCccceeEecCCcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCcc---------cee
Confidence            99999999999999999999999999999999999998     56889999888 7776543322211         113


Q ss_pred             cccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc-cCC------ceEEEEEccCCCeeee
Q psy10867        275 FIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-HKG------PVLGAFLGLLPPAIHD  337 (343)
Q Consensus       275 ~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~------~v~~~~~sp~~~~l~~  337 (343)
                      +....++|.++.|.  |+++|-++.+| |++||+.+++.+..++ ...      ....+.|.++.+.++-
T Consensus       156 l~~~eG~I~~i~W~--g~lIAWand~G-v~vyd~~~~~~l~~i~~p~~~~R~e~fpphl~W~~~~~LVIG  222 (846)
T KOG2066|consen  156 LSEGEGPIHSIKWR--GNLIAWANDDG-VKVYDTPTRQRLTNIPPPSQSVRPELFPPHLHWQDEDRLVIG  222 (846)
T ss_pred             eecCccceEEEEec--CcEEEEecCCC-cEEEeccccceeeccCCCCCCCCcccCCCceEecCCCeEEEe
Confidence            45567899999996  66888887765 8999999998887776 222      2356788888776653

>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=98.89  E-value=1e-08  Score=54.76  Aligned_cols=39  Identities=21%  Similarity=0.384  Sum_probs=36.7

Q ss_pred             ceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEe
Q psy10867         25 GTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWP   64 (343)
Q Consensus        25 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~   64 (343)
                      |+++.++++|.. .|.+++|+|++.++++++.|+.|++||
T Consensus         1 g~~~~~~~~h~~-~i~~i~~~~~~~~~~s~~~D~~i~vwd   39 (39)
T PF00400_consen    1 GKCVRTFRGHSS-SINSIAWSPDGNFLASGSSDGTIRVWD   39 (39)
T ss_dssp             EEEEEEEESSSS-SEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred             CeEEEEEcCCCC-cEEEEEEecccccceeeCCCCEEEEEC
Confidence            578899999999 999999999999999999999999997

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....

>KOG1645|consensus

Probab=98.89  E-value=2.1e-07  Score=73.61  Aligned_cols=232  Identities=13%  Similarity=0.142  Sum_probs=137.4

Q ss_pred             EEEEeCCCcccceecccCCcceEEEEECCCCC-EEE-EecCCeEEEEEccCCceEEEecccCCCeEEEEEecC-CCEEEE
Q psy10867         60 IQAWPVNSQEKAQLRLICPGRISSMQASPDAA-YIA-VSIETKLHMWQISSGRLLATASSHYQPITIVKWSAD-SNFIVT  136 (343)
Q Consensus        60 i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~-~~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~s  136 (343)
                      ++..+..+.+..+.+..+...|..++|||..+ ++. .+.++.|+|.|+++...+..+..+ ..+++++|.-| .++|..
T Consensus       175 v~~l~~~~fkssq~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~-~~~wSC~wDlde~h~IYa  253 (463)
T KOG1645|consen  175 VQKLESHDFKSSQILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAY-NQIWSCCWDLDERHVIYA  253 (463)
T ss_pred             eEEeccCCcchhhcccccchhhhhhccCccccceeeeeccCceEEEEecccceeeeheecc-CCceeeeeccCCcceeEE
Confidence            45555555555566667788899999999877 333 478899999999999999888887 78999999874 457888


Q ss_pred             ecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecc--cccceEEEE------eecCCCceEEEEeeCCCe
Q psy10867        137 GGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQ--HSLPVTHVT------LSKLGAKSRVASVSHDRT  208 (343)
Q Consensus       137 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~------~~~~~~~~~l~~~~~d~~  208 (343)
                      |-.+|.|.+||++..+...                     ..+.+  ...+|..++      ..+.+  .+++..+.+  
T Consensus       254 Gl~nG~VlvyD~R~~~~~~---------------------~e~~a~~t~~pv~~i~~~~~n~~f~~g--glLv~~lt~--  308 (463)
T KOG1645|consen  254 GLQNGMVLVYDMRQPEGPL---------------------MELVANVTINPVHKIAPVQPNKIFTSG--GLLVFALTV--  308 (463)
T ss_pred             eccCceEEEEEccCCCchH---------------------hhhhhhhccCcceeecccCcccccccc--ceEEeeehh--
Confidence            8899999999998753211                     11111  112232222      22333  345544433  


Q ss_pred             EEEEecC----CCceEEEeecCCcEEEEEEcCCCCEEEEEcCCC-------cE----------EEEEeeccccccccccc
Q psy10867        209 CKIFDLC----TGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEG-------VI----------KSFCLRQVPRTRDHHIQ  267 (343)
Q Consensus       209 i~~wd~~----~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~-------~i----------~i~d~~~~~~~~~~~~~  267 (343)
                      +..|++.    ..-++..+..++...++++.+..+.++......       .|          .+|..+...-       
T Consensus       309 l~f~ei~~s~~~~p~vlele~pG~cismqy~~~snh~l~tyRs~pn~p~~r~il~~~d~~dG~pVc~~r~~~~-------  381 (463)
T KOG1645|consen  309 LQFYEIVFSAECLPCVLELEPPGICISMQYHGVSNHLLLTYRSNPNFPQSRFILGRIDFRDGFPVCGKRRTYF-------  381 (463)
T ss_pred             hhhhhhhccccCCCcccccCCCcceeeeeecCccceEEEEecCCCCCccceeeeeeeccccCceeeeeccccc-------
Confidence            4455543    222333334456667777777656555543321       01          1111110000       


Q ss_pred             CCCCCCccccccCcEEEEEEccCCCEEE-EEeCCCcEEEEecccceeeeecccCCceEEEEEc
Q psy10867        268 DSTSNPDFIGHEKQVTSLSCSITGITLL-SSSADETLKIWHTISRQCLRTIQHKGPVLGAFLG  329 (343)
Q Consensus       268 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~-s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~s  329 (343)
                       +...  -+-+...  .+.-.++.++++ .+...+.+.+||..+++.++++....+|.++...
T Consensus       382 -Gs~~--~kl~t~~--ai~~~~~nn~iv~~gd~tn~lil~D~~s~evvQ~l~~~epv~Dicp~  439 (463)
T KOG1645|consen  382 -GSKQ--TKLSTTQ--AIRAVEDNNYIVVVGDSTNELILQDPHSFEVVQTLALSEPVLDICPN  439 (463)
T ss_pred             -CCcc--ccccccc--ceeccccccEEEEecCCcceeEEeccchhheeeecccCcceeeccee
Confidence             0000  0001110  111234556555 5566689999999999999999877888877654

>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=98.88  E-value=5.2e-06  Score=68.88  Aligned_cols=251  Identities=15%  Similarity=0.133  Sum_probs=132.3

Q ss_pred             CCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccC----------------
Q psy10867         14 SGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLIC----------------   77 (343)
Q Consensus        14 dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~----------------   77 (343)
                      .+.+.|+|+++++....... .. .+....|+|+|..++...+ +.|.+++..+++..+.....                
T Consensus        22 ~~~y~i~d~~~~~~~~l~~~-~~-~~~~~~~sP~g~~~~~v~~-~nly~~~~~~~~~~~lT~dg~~~i~nG~~dwvyeEE   98 (353)
T PF00930_consen   22 KGDYYIYDIETGEITPLTPP-PP-KLQDAKWSPDGKYIAFVRD-NNLYLRDLATGQETQLTTDGEPGIYNGVPDWVYEEE   98 (353)
T ss_dssp             EEEEEEEETTTTEEEESS-E-ET-TBSEEEE-SSSTEEEEEET-TEEEEESSTTSEEEESES--TTTEEESB--HHHHHH
T ss_pred             ceeEEEEecCCCceEECcCC-cc-ccccceeecCCCeeEEEec-CceEEEECCCCCeEEeccccceeEEcCccceecccc
Confidence            46789999998776554444 44 7889999999999998887 89999998777554332211                


Q ss_pred             -CcceEEEEECCCCCEEEE--ecCCe-----------------------------------EEEEEccCCceEE--Ee--
Q psy10867         78 -PGRISSMQASPDAAYIAV--SIETK-----------------------------------LHMWQISSGRLLA--TA--  115 (343)
Q Consensus        78 -~~~v~~~~~s~~~~~l~~--~~d~~-----------------------------------i~v~~~~~~~~~~--~~--  115 (343)
                       -+.-..+.||||+++||.  -.+..                                   +.|+++.+++...  ..  
T Consensus        99 v~~~~~~~~WSpd~~~la~~~~d~~~v~~~~~~~~~~~~~~yp~~~~~~YPk~G~~np~v~l~v~~~~~~~~~~~~~~~~  178 (353)
T PF00930_consen   99 VFDRRSAVWWSPDSKYLAFLRFDEREVPEYPLPDYSPPDSQYPEVESIRYPKAGDPNPRVSLFVVDLASGKTTELDPPNS  178 (353)
T ss_dssp             TSSSSBSEEE-TTSSEEEEEEEE-TTS-EEEEEEESSSTESS-EEEEEE--BTTS---EEEEEEEESSSTCCCEE---HH
T ss_pred             ccccccceEECCCCCEEEEEEECCcCCceEEeeccCCccccCCcccccccCCCCCcCCceEEEEEECCCCcEEEeeeccc
Confidence             122356889999998885  23332                                   2233333332211  01  


Q ss_pred             -cccCCCeEEEEEecCCCEEEEe--cCC---CeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEE
Q psy10867        116 -SSHYQPITIVKWSADSNFIVTG--GED---GTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHV  189 (343)
Q Consensus       116 -~~~~~~v~~~~~~~~~~~l~s~--~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  189 (343)
                       ..-...+..+.|.++++.|+..  ..+   ..+.+.|..++.......                  ....+--..-...
T Consensus       179 ~~~~~~yl~~v~W~~d~~~l~~~~~nR~q~~~~l~~~d~~tg~~~~~~~------------------e~~~~Wv~~~~~~  240 (353)
T PF00930_consen  179 LNPQDYYLTRVGWSPDGKRLWVQWLNRDQNRLDLVLCDASTGETRVVLE------------------ETSDGWVDVYDPP  240 (353)
T ss_dssp             HHTSSEEEEEEEEEETTEEEEEEEEETTSTEEEEEEEEECTTTCEEEEE------------------EESSSSSSSSSEE
T ss_pred             cCCCccCcccceecCCCcEEEEEEcccCCCEEEEEEEECCCCceeEEEE------------------ecCCcceeeeccc
Confidence             1123346778888887733332  222   235566665543322110                  1111111122244


Q ss_pred             Eee-cCCCceEEEEeeCCCeEE--EEecCCCceEEEee-cCCcEEE-EEEcCCCCEEE-EEcCC--CcEEEEEeecc-cc
Q psy10867        190 TLS-KLGAKSRVASVSHDRTCK--IFDLCTGEDLLSLI-LDTRLTC-VAFDGTEDNIY-MGTSE--GVIKSFCLRQV-PR  260 (343)
Q Consensus       190 ~~~-~~~~~~~l~~~~~d~~i~--~wd~~~~~~~~~~~-~~~~i~~-~~~~~~~~~l~-~~~~d--~~i~i~d~~~~-~~  260 (343)
                      .+. +++. .++.....+|.-+  +++...+.. ..+. ..-.|.. +.++++++.++ ++..+  ..-.+|.+... ..
T Consensus       241 ~~~~~~~~-~~l~~s~~~G~~hly~~~~~~~~~-~~lT~G~~~V~~i~~~d~~~~~iyf~a~~~~p~~r~lY~v~~~~~~  318 (353)
T PF00930_consen  241 HFLGPDGN-EFLWISERDGYRHLYLYDLDGGKP-RQLTSGDWEVTSILGWDEDNNRIYFTANGDNPGERHLYRVSLDSGG  318 (353)
T ss_dssp             EE-TTTSS-EEEEEEETTSSEEEEEEETTSSEE-EESS-SSS-EEEEEEEECTSSEEEEEESSGGTTSBEEEEEETTETT
T ss_pred             ccccCCCC-EEEEEEEcCCCcEEEEEcccccce-eccccCceeecccceEcCCCCEEEEEecCCCCCceEEEEEEeCCCC
Confidence            544 5554 5666666777544  445544443 3333 3445644 77888877665 44432  34455554432 11


Q ss_pred             cccccccCCCCCCccccccCcEEEEEEccCCCEEEEE
Q psy10867        261 TRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSS  297 (343)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~  297 (343)
                      .          ...+......-..+.|||++++++-.
T Consensus       319 ~----------~~~LT~~~~~~~~~~~Spdg~y~v~~  345 (353)
T PF00930_consen  319 E----------PKCLTCEDGDHYSASFSPDGKYYVDT  345 (353)
T ss_dssp             E----------EEESSTTSSTTEEEEE-TTSSEEEEE
T ss_pred             C----------eEeccCCCCCceEEEECCCCCEEEEE
Confidence            1          11122111212689999999987743

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....

>KOG4649|consensus

Probab=98.86  E-value=1.4e-05  Score=60.13  Aligned_cols=104  Identities=10%  Similarity=-0.062  Sum_probs=70.2

Q ss_pred             ceEEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEE
Q psy10867          5 NEVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSM   84 (343)
Q Consensus         5 ~~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~   84 (343)
                      ...++-+-..|.+++-+..+|+....+...+...+.. ...+++.++..++.|+.....|..+..++...+-..+...+-
T Consensus        63 gdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~~vk~~a-~~d~~~glIycgshd~~~yalD~~~~~cVykskcgG~~f~sP  141 (354)
T KOG4649|consen   63 GDFVVLGCYSGGLYFLCVKTGSQIWNFVILETVKVRA-QCDFDGGLIYCGSHDGNFYALDPKTYGCVYKSKCGGGTFVSP  141 (354)
T ss_pred             CCEEEEEEccCcEEEEEecchhheeeeeehhhhccce-EEcCCCceEEEecCCCcEEEecccccceEEecccCCceeccc
Confidence            3344555557888999999998888777666423333 346788999999999999999999888876544333333344


Q ss_pred             EECC-CCCEEEEecCCeEEEEEccCC
Q psy10867         85 QASP-DAAYIAVSIETKLHMWQISSG  109 (343)
Q Consensus        85 ~~s~-~~~~l~~~~d~~i~v~~~~~~  109 (343)
                      +..| ++.+.++...|.+.--..+++
T Consensus       142 ~i~~g~~sly~a~t~G~vlavt~~~~  167 (354)
T KOG4649|consen  142 VIAPGDGSLYAAITAGAVLAVTKNPY  167 (354)
T ss_pred             eecCCCceEEEEeccceEEEEccCCC
Confidence            4555 666666666666555555444

>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex

Probab=98.84  E-value=1.1e-05  Score=67.89  Aligned_cols=243  Identities=14%  Similarity=0.132  Sum_probs=134.1

Q ss_pred             eEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcc------cceecccCCcceEEEEECCC
Q psy10867         16 AISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQE------KAQLRLICPGRISSMQASPD   89 (343)
Q Consensus        16 ~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~------~~~~~~~~~~~v~~~~~s~~   89 (343)
                      .|.||+. +|+.+.++.-..+ .+.++.|+.+..+++...+ |.+++||+....      .+.........+....+..+
T Consensus        62 ~I~iys~-sG~ll~~i~w~~~-~iv~~~wt~~e~LvvV~~d-G~v~vy~~~G~~~fsl~~~i~~~~v~e~~i~~~~~~~~  138 (410)
T PF04841_consen   62 SIQIYSS-SGKLLSSIPWDSG-RIVGMGWTDDEELVVVQSD-GTVRVYDLFGEFQFSLGEEIEEEKVLECRIFAIWFYKN  138 (410)
T ss_pred             EEEEECC-CCCEeEEEEECCC-CEEEEEECCCCeEEEEEcC-CEEEEEeCCCceeechhhhccccCcccccccccccCCC
Confidence            5999996 7888888776667 9999999998888888877 999999986443      01111111222333344445


Q ss_pred             CCEEEEecCCeEEEEEccCCc-eEEEec---ccCC------CeEE-EEEecCCCEEEEecCCCeEEEeecCccceeeeee
Q psy10867         90 AAYIAVSIETKLHMWQISSGR-LLATAS---SHYQ------PITI-VKWSADSNFIVTGGEDGTICVWQLSRLICKQTVA  158 (343)
Q Consensus        90 ~~~l~~~~d~~i~v~~~~~~~-~~~~~~---~~~~------~v~~-~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~  158 (343)
                      |- ++...++.+.+.+-.... ....+.   ....      .... ..++.+....+....++.+.+.+-...       
T Consensus       139 Gi-vvLt~~~~~~~v~n~~~~~~~~~~~~~p~~~~~~~~~~~~~~i~~l~~~~~~~i~~~~g~~i~~i~~~~~-------  210 (410)
T PF04841_consen  139 GI-VVLTGNNRFYVVNNIDEPVKLRRLPEIPGLWTKFHWWPSWTVIPLLSSDRVVEILLANGETIYIIDENSF-------  210 (410)
T ss_pred             CE-EEECCCCeEEEEeCccccchhhccccCCCcccccccccccccceEeecCcceEEEEecCCEEEEEEcccc-------
Confidence            53 333345554444322211 111111   1000      0000 123333344444444444443332221       


Q ss_pred             cCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecC--CcEEEEEEcC
Q psy10867        159 FGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILD--TRLTCVAFDG  236 (343)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~--~~i~~~~~~~  236 (343)
                                        ..+ ...+++..+++||++  +++|.-..+|.+.+....-.+.+..+..+  .....+.|.-
T Consensus       211 ------------------~~i-~~~~~i~~iavSpng--~~iAl~t~~g~l~v~ssDf~~~~~e~~~~~~~~p~~~~WCG  269 (410)
T PF04841_consen  211 ------------------KQI-DSDGPIIKIAVSPNG--KFIALFTDSGNLWVVSSDFSEKLCEFDTDSKSPPKQMAWCG  269 (410)
T ss_pred             ------------------ccc-cCCCCeEEEEECCCC--CEEEEEECCCCEEEEECcccceeEEeecCcCCCCcEEEEEC
Confidence                              001 124689999999999  78999899999999987666677666644  5677788875


Q ss_pred             CCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeee
Q psy10867        237 TEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRT  316 (343)
Q Consensus       237 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~  316 (343)
                      +...++.-  ...+.+....                      ...   +.|.-++..++..-.|| +||..-..-+.++.
T Consensus       270 ~dav~l~~--~~~l~lvg~~----------------------~~~---~~~~~~~~~~l~~E~DG-~riit~~~~~~l~~  321 (410)
T PF04841_consen  270 NDAVVLSW--EDELLLVGPD----------------------GDS---ISFWYDGPVILVSEIDG-VRIITSTSHEFLQR  321 (410)
T ss_pred             CCcEEEEe--CCEEEEECCC----------------------CCc---eEEeccCceEEeccCCc-eEEEeCCceEEEEE
Confidence            54332222  2334333211                      111   34444444455555565 78877666666665


Q ss_pred             cc
Q psy10867        317 IQ  318 (343)
Q Consensus       317 ~~  318 (343)
                      ..
T Consensus       322 Vp  323 (410)
T PF04841_consen  322 VP  323 (410)
T ss_pred             CC
Confidence            54

Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm

>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []

Probab=98.84  E-value=1.3e-05  Score=61.81  Aligned_cols=205  Identities=11%  Similarity=0.092  Sum_probs=119.7

Q ss_pred             EEecCCCCcceEEEEeCC-ceEEEEEcCCCeEEEEeCCCcccceecc-cCCcceEEEEECCCCCEEEEe-cCCeEEEEEc
Q psy10867         30 SYKGASVLSPHSMCLLGN-DYVLGVEKGKPMIQAWPVNSQEKAQLRL-ICPGRISSMQASPDAAYIAVS-IETKLHMWQI  106 (343)
Q Consensus        30 ~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~i~iw~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~-~d~~i~v~~~  106 (343)
                      .+.+-.. .+..++|.|+ +.++++....+.|..++.+ ++.++... ...+....+++..++.++++. .++.+.++++
T Consensus        16 ~l~g~~~-e~SGLTy~pd~~tLfaV~d~~~~i~els~~-G~vlr~i~l~g~~D~EgI~y~g~~~~vl~~Er~~~L~~~~~   93 (248)
T PF06977_consen   16 PLPGILD-ELSGLTYNPDTGTLFAVQDEPGEIYELSLD-GKVLRRIPLDGFGDYEGITYLGNGRYVLSEERDQRLYIFTI   93 (248)
T ss_dssp             E-TT--S--EEEEEEETTTTEEEEEETTTTEEEEEETT---EEEEEE-SS-SSEEEEEE-STTEEEEEETTTTEEEEEEE
T ss_pred             ECCCccC-CccccEEcCCCCeEEEEECCCCEEEEEcCC-CCEEEEEeCCCCCCceeEEEECCCEEEEEEcCCCcEEEEEE
Confidence            4555566 7999999996 6788888888899888875 56554332 334567889998888877775 4789999988


Q ss_pred             cCCc------eEEEec-----ccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccc---eeeeeecCCCCCCCCccccc
Q psy10867        107 SSGR------LLATAS-----SHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLI---CKQTVAFGIPGSSGKGVTGL  172 (343)
Q Consensus       107 ~~~~------~~~~~~-----~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~---~~~~~~~~~~~~~~~~~~~~  172 (343)
                      ....      ....+.     .++..+-.++|.|.++.|+.+-+..-..++.++...   ......              
T Consensus        94 ~~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~~~~~~~~~--------------  159 (248)
T PF06977_consen   94 DDDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFPGGFDLFVSD--------------  159 (248)
T ss_dssp             ----TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT-SS--EEEE--------------
T ss_pred             eccccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEccccCccceeecc--------------
Confidence            4321      111121     245568999999988878777766666777665411   000000              


Q ss_pred             cceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCC----------cEEEEEEcCCCCEEE
Q psy10867        173 TEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDT----------RLTCVAFDGTEDNIY  242 (343)
Q Consensus       173 ~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~----------~i~~~~~~~~~~~l~  242 (343)
                      .............+.+++++|... ++++.......|..+| .+|+.+..+....          ....++|.++|++.+
T Consensus       160 ~~~~~~~~~~~~d~S~l~~~p~t~-~lliLS~es~~l~~~d-~~G~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~LYI  237 (248)
T PF06977_consen  160 DQDLDDDKLFVRDLSGLSYDPRTG-HLLILSDESRLLLELD-RQGRVVSSLSLDRGFHGLSKDIPQPEGIAFDPDGNLYI  237 (248)
T ss_dssp             -HHHH-HT--SS---EEEEETTTT-EEEEEETTTTEEEEE--TT--EEEEEE-STTGGG-SS---SEEEEEE-TT--EEE
T ss_pred             ccccccccceeccccceEEcCCCC-eEEEEECCCCeEEEEC-CCCCEEEEEEeCCcccCcccccCCccEEEECCCCCEEE
Confidence            000011122344578999999864 7888888899999999 7888877776432          578899999986655


Q ss_pred             EEcCCCcEEEE
Q psy10867        243 MGTSEGVIKSF  253 (343)
Q Consensus       243 ~~~~d~~i~i~  253 (343)
                      ++ .-+..++|
T Consensus       238 vs-EpNlfy~f  247 (248)
T PF06977_consen  238 VS-EPNLFYRF  247 (248)
T ss_dssp             EE-TTTEEEEE
T ss_pred             Ec-CCceEEEe
Confidence            55 45555444

Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.

>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit

Probab=98.84  E-value=5.4e-06  Score=67.90  Aligned_cols=214  Identities=16%  Similarity=0.202  Sum_probs=132.2

Q ss_pred             CeEEEEecCCceEEEEEecCCCCcceEEEEe---C----CceEEEEEcC---------C-CeEEEEeCCCc----cccee
Q psy10867         15 GAISVWEPKGGTLLMSYKGASVLSPHSMCLL---G----NDYVLGVEKG---------K-PMIQAWPVNSQ----EKAQL   73 (343)
Q Consensus        15 g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~---~----~~~~~~~~~~---------~-~~i~iw~~~~~----~~~~~   73 (343)
                      ..|++.|..+.+.+.++.-...-.+.+++..   .    ...+++.|..         . |.|.++++...    ..+..
T Consensus         2 s~i~l~d~~~~~~~~~~~l~~~E~~~s~~~~~l~~~~~~~~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~~   81 (321)
T PF03178_consen    2 SSIRLVDPTTFEVLDSFELEPNEHVTSLCSVKLKGDSTGKKEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLKL   81 (321)
T ss_dssp             -EEEEEETTTSSEEEEEEEETTEEEEEEEEEEETTS---SSEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEEE
T ss_pred             cEEEEEeCCCCeEEEEEECCCCceEEEEEEEEEcCccccccCEEEEEecccccccccccCcEEEEEEEEcccccceEEEE
Confidence            4689999988888877665544356655544   2    2466666542         2 88999999884    12211


Q ss_pred             --cccCCcceEEEEECCCCCEEEEecCCeEEEEEccCCc-eEEEecc-cCCCeEEEEEecCCCEEEEecCCCeEEEeecC
Q psy10867         74 --RLICPGRISSMQASPDAAYIAVSIETKLHMWQISSGR-LLATASS-HYQPITIVKWSADSNFIVTGGEDGTICVWQLS  149 (343)
Q Consensus        74 --~~~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~-~~~~~~~-~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~  149 (343)
                        .....++|++++-. ++ .|+++.++.|.+|++...+ ......- ....+.++...  +++++.|.....+.++..+
T Consensus        82 i~~~~~~g~V~ai~~~-~~-~lv~~~g~~l~v~~l~~~~~l~~~~~~~~~~~i~sl~~~--~~~I~vgD~~~sv~~~~~~  157 (321)
T PF03178_consen   82 IHSTEVKGPVTAICSF-NG-RLVVAVGNKLYVYDLDNSKTLLKKAFYDSPFYITSLSVF--KNYILVGDAMKSVSLLRYD  157 (321)
T ss_dssp             EEEEEESS-EEEEEEE-TT-EEEEEETTEEEEEEEETTSSEEEEEEE-BSSSEEEEEEE--TTEEEEEESSSSEEEEEEE
T ss_pred             EEEEeecCcceEhhhh-CC-EEEEeecCEEEEEEccCcccchhhheecceEEEEEEecc--ccEEEEEEcccCEEEEEEE
Confidence              22457889998866 44 4777778999999998887 4433222 22355555554  6689999888888887554


Q ss_pred             ccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCC-------Cc----
Q psy10867        150 RLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCT-------GE----  218 (343)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~-------~~----  218 (343)
                      ....  .+                 ...........++++.+.+++  +.++.+..+|.+.++....       +.    
T Consensus       158 ~~~~--~l-----------------~~va~d~~~~~v~~~~~l~d~--~~~i~~D~~gnl~~l~~~~~~~~~~~~~~~L~  216 (321)
T PF03178_consen  158 EENN--KL-----------------ILVARDYQPRWVTAAEFLVDE--DTIIVGDKDGNLFVLRYNPEIPNSRDGDPKLE  216 (321)
T ss_dssp             TTTE---E-----------------EEEEEESS-BEEEEEEEE-SS--SEEEEEETTSEEEEEEE-SS-SSTTTTTTBEE
T ss_pred             ccCC--EE-----------------EEEEecCCCccEEEEEEecCC--cEEEEEcCCCeEEEEEECCCCcccccccccce
Confidence            4211  00                 111112345568889998777  5899999999999997752       22    


Q ss_pred             eEEEeecCCcEEEE---EEcC--CCC------EEEEEcCCCcEEEE
Q psy10867        219 DLLSLILDTRLTCV---AFDG--TED------NIYMGTSEGVIKSF  253 (343)
Q Consensus       219 ~~~~~~~~~~i~~~---~~~~--~~~------~l~~~~~d~~i~i~  253 (343)
                      ....+..+..++++   .+.|  .+.      .++.++.+|.|...
T Consensus       217 ~~~~f~lg~~v~~~~~~~l~~~~~~~~~~~~~~i~~~T~~G~Ig~l  262 (321)
T PF03178_consen  217 RISSFHLGDIVNSFRRGSLIPRSGSSESPNRPQILYGTVDGSIGVL  262 (321)
T ss_dssp             EEEEEE-SS-EEEEEE--SS--SSSS-TTEEEEEEEEETTS-EEEE
T ss_pred             eEEEEECCCccceEEEEEeeecCCCCcccccceEEEEecCCEEEEE
Confidence            23444567778888   5555  222      48888899998844

CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....

>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family

Probab=98.83  E-value=5.8e-05  Score=65.77  Aligned_cols=201  Identities=12%  Similarity=0.057  Sum_probs=111.9

Q ss_pred             ceEEEecCCCCeEEEEecCCceEEEEEecCCCCcce----------EEEEeCCceEEEEEcCCCeEEEEeCCCcccceec
Q psy10867          5 NEVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPH----------SMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLR   74 (343)
Q Consensus         5 ~~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~----------~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~   74 (343)
                      ...+|.++.++.|+-.|..+|+.+.++.......+.          .+++. +++++++. .++.+.-.|..+++.+...
T Consensus        69 ~g~vyv~s~~g~v~AlDa~TGk~lW~~~~~~~~~~~~~~~~~~~~rg~av~-~~~v~v~t-~dg~l~ALDa~TGk~~W~~  146 (527)
T TIGR03075        69 DGVMYVTTSYSRVYALDAKTGKELWKYDPKLPDDVIPVMCCDVVNRGVALY-DGKVFFGT-LDARLVALDAKTGKVVWSK  146 (527)
T ss_pred             CCEEEEECCCCcEEEEECCCCceeeEecCCCCcccccccccccccccceEE-CCEEEEEc-CCCEEEEEECCCCCEEeec
Confidence            456777888889999999999999887643210111          12222 34555444 4589999999999887433


Q ss_pred             ccC-CcceEEEEECC---CCCEEEEe------cCCeEEEEEccCCceEEEecccCC------------------------
Q psy10867         75 LIC-PGRISSMQASP---DAAYIAVS------IETKLHMWQISSGRLLATASSHYQ------------------------  120 (343)
Q Consensus        75 ~~~-~~~v~~~~~s~---~~~~l~~~------~d~~i~v~~~~~~~~~~~~~~~~~------------------------  120 (343)
                      ... ...-..+.-+|   ++.+++..      .+|.|.-+|.++|+.+-.+..-..                        
T Consensus       147 ~~~~~~~~~~~tssP~v~~g~Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~~~~p~~~~~~~~~~~~~~~~~~~~tw~~~  226 (527)
T TIGR03075       147 KNGDYKAGYTITAAPLVVKGKVITGISGGEFGVRGYVTAYDAKTGKLVWRRYTVPGDMGYLDKADKPVGGEPGAKTWPGD  226 (527)
T ss_pred             ccccccccccccCCcEEECCEEEEeecccccCCCcEEEEEECCCCceeEeccCcCCCcccccccccccccccccCCCCCC
Confidence            211 11001111122   55555542      268899999999988765432110                        


Q ss_pred             -------CeE-EEEEecCCCEEEEecCC-----C-----------eEEEeecCccceeeeeecCCCCCCCCcccccccee
Q psy10867        121 -------PIT-IVKWSADSNFIVTGGED-----G-----------TICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPL  176 (343)
Q Consensus       121 -------~v~-~~~~~~~~~~l~s~~~d-----g-----------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  176 (343)
                             .+. .+.+.|+..+++.+..+     +           .|.-.|+++++....++......-           
T Consensus       227 ~~~~gg~~~W~~~s~D~~~~lvy~~tGnp~p~~~~~r~gdnl~~~s~vAld~~TG~~~W~~Q~~~~D~w-----------  295 (527)
T TIGR03075       227 AWKTGGGATWGTGSYDPETNLIYFGTGNPSPWNSHLRPGDNLYTSSIVARDPDTGKIKWHYQTTPHDEW-----------  295 (527)
T ss_pred             ccccCCCCccCceeEcCCCCeEEEeCCCCCCCCCCCCCCCCccceeEEEEccccCCEEEeeeCCCCCCc-----------
Confidence                   111 23555555556555422     2           466667777766665442100000           


Q ss_pred             eeecccccceEEEEeecCCC-ceEEEEeeCCCeEEEEecCCCceE
Q psy10867        177 HVKSQHSLPVTHVTLSKLGA-KSRVASVSHDRTCKIFDLCTGEDL  220 (343)
Q Consensus       177 ~~~~~~~~~v~~~~~~~~~~-~~~l~~~~~d~~i~~wd~~~~~~~  220 (343)
                       .+... ....-+.+..++. ...++.+..+|.+++.|.++|+.+
T Consensus       296 -D~d~~-~~p~l~d~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~i  338 (527)
T TIGR03075       296 -DYDGV-NEMILFDLKKDGKPRKLLAHADRNGFFYVLDRTNGKLL  338 (527)
T ss_pred             -cccCC-CCcEEEEeccCCcEEEEEEEeCCCceEEEEECCCCcee
Confidence             00000 1111122223331 147788999999999999999876

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.

>KOG1920|consensus

Probab=98.82  E-value=6.6e-06  Score=74.40  Aligned_cols=222  Identities=14%  Similarity=0.121  Sum_probs=133.0

Q ss_pred             CcceEEEEECCCCCEEE-EecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeee
Q psy10867         78 PGRISSMQASPDAAYIA-VSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQT  156 (343)
Q Consensus        78 ~~~v~~~~~s~~~~~l~-~~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~  156 (343)
                      .+.|.++.|..+..-++ +...|.|.+-|..+... .....-.+.|.+++|+||++.++..+..+++.+-+- +...+..
T Consensus        68 d~~i~s~~fl~d~~~i~v~~~~G~iilvd~et~~~-eivg~vd~GI~aaswS~Dee~l~liT~~~tll~mT~-~f~~i~E  145 (1265)
T KOG1920|consen   68 DDEIVSVQFLADTNSICVITALGDIILVDPETLEL-EIVGNVDNGISAASWSPDEELLALITGRQTLLFMTK-DFEPIAE  145 (1265)
T ss_pred             CcceEEEEEecccceEEEEecCCcEEEEcccccce-eeeeeccCceEEEeecCCCcEEEEEeCCcEEEEEec-cccchhc
Confidence            35899999988776555 57788888888876643 233334577999999999999998888777765432 1111111


Q ss_pred             eec-------CCCC--CCCC---------ccccccceeeeec-----ccccceEEEEeecCCCceEEEEe-----eCCCe
Q psy10867        157 VAF-------GIPG--SSGK---------GVTGLTEPLHVKS-----QHSLPVTHVTLSKLGAKSRVASV-----SHDRT  208 (343)
Q Consensus       157 ~~~-------~~~~--~~~~---------~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~~~l~~~-----~~d~~  208 (343)
                      ..+       ....  ..+.         +.....+.....+     .-...=+.+.|-.+|  .++++.     ...+.
T Consensus       146 ~~L~~d~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~~~~~~~~~~~~~IsWRgDg--~~fAVs~~~~~~~~Rk  223 (1265)
T KOG1920|consen  146 KPLDADDERKSKFVNVGWGRKETQFRGSEGRQAARQKIEKEKALEQIEQDDHKTSISWRGDG--EYFAVSFVESETGTRK  223 (1265)
T ss_pred             cccccccccccccceecccccceeeecchhhhcccccccccccccchhhccCCceEEEccCC--cEEEEEEEeccCCcee
Confidence            111       0000  0000         0000000000000     011222458888888  788772     23379


Q ss_pred             EEEEecCCCceEEEee-cCCcEEEEEEcCCCCEEEEE---cCCCcEEEEEeecccccccccccCCCCCCccccccCcEEE
Q psy10867        209 CKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIYMG---TSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTS  284 (343)
Q Consensus       209 i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~---~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  284 (343)
                      |++||.+ |..-..-. ....-.+++|-|.|..+++-   ++|+.|.+|.-+..... ++       ...++.....+..
T Consensus       224 irV~drE-g~Lns~se~~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffErNGL~hg-~f-------~l~~p~de~~ve~  294 (1265)
T KOG1920|consen  224 IRVYDRE-GALNSTSEPVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFERNGLRHG-EF-------VLPFPLDEKEVEE  294 (1265)
T ss_pred             EEEeccc-chhhcccCcccccccceeecCCCCeEeeeeecCCCCcEEEEecCCcccc-cc-------ccCCcccccchhe
Confidence            9999965 44332222 34456789999999998884   45667888876553321 11       2223333445899


Q ss_pred             EEEccCCCEEEE---EeCCCcEEEEecccce
Q psy10867        285 LSCSITGITLLS---SSADETLKIWHTISRQ  312 (343)
Q Consensus       285 ~~~s~~~~~l~s---~~~dg~i~iwd~~~~~  312 (343)
                      ++|+.++..||.   ......|++|-+.+..
T Consensus       295 L~Wns~sdiLAv~~~~~e~~~v~lwt~~Nyh  325 (1265)
T KOG1920|consen  295 LAWNSNSDILAVVTSNLENSLVQLWTTGNYH  325 (1265)
T ss_pred             eeecCCCCceeeeecccccceEEEEEecCeE
Confidence            999999999986   4445559999887653

>KOG1008|consensus

Probab=98.80  E-value=3.4e-09  Score=88.41  Aligned_cols=196  Identities=17%  Similarity=0.222  Sum_probs=130.6

Q ss_pred             cceEEEEeC--CceEEEEEcCCCeEEEEeCCCcccc--eecccCCcceEEEEECC-CCCEEEEec-----CCeEEEEEcc
Q psy10867         38 SPHSMCLLG--NDYVLGVEKGKPMIQAWPVNSQEKA--QLRLICPGRISSMQASP-DAAYIAVSI-----ETKLHMWQIS  107 (343)
Q Consensus        38 ~v~~~~~~~--~~~~~~~~~~~~~i~iw~~~~~~~~--~~~~~~~~~v~~~~~s~-~~~~l~~~~-----d~~i~v~~~~  107 (343)
                      .+.|+++.-  +..+++.|..+|.|.+-......-.  ....++....++++|++ |.+.||+|-     |..+.|||+.
T Consensus        58 y~kcva~~y~~d~cIlavG~atG~I~l~s~r~~hdSs~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwdi~  137 (783)
T KOG1008|consen   58 YVKCVASFYGNDRCILAVGSATGNISLLSVRHPHDSSAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWDIN  137 (783)
T ss_pred             CceeehhhcCCchhhhhhccccCceEEeecCCcccccceecccccccccccccccccHHHHHhhhhhhcccCCccceecc
Confidence            456776653  3478888988899998876544322  34457778899999998 667888763     4579999998


Q ss_pred             CC--ceEE--Eecc-cCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeeccc
Q psy10867        108 SG--RLLA--TASS-HYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQH  182 (343)
Q Consensus       108 ~~--~~~~--~~~~-~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (343)
                      ++  .+..  .+.+ ......+++|..+.+.+.+|.....++++|++...                       .....-.
T Consensus       138 s~ltvPke~~~fs~~~l~gqns~cwlrd~klvlaGm~sr~~~ifdlRqs~-----------------------~~~~svn  194 (783)
T KOG1008|consen  138 SLLTVPKESPLFSSSTLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLRQSL-----------------------DSVSSVN  194 (783)
T ss_pred             cccCCCccccccccccccCccccccccCcchhhcccccchhhhhhhhhhh-----------------------hhhhhhh
Confidence            77  2221  2222 33455688998888999999999999999998431                       1111123


Q ss_pred             ccceEEEEeecCCCceEEEEeeCCCeEEEEe-cCCCce-EEEeec-----CCcEEEEEEcCCCC-EEEE-EcCCCcEEEE
Q psy10867        183 SLPVTHVTLSKLGAKSRVASVSHDRTCKIFD-LCTGED-LLSLIL-----DTRLTCVAFDGTED-NIYM-GTSEGVIKSF  253 (343)
Q Consensus       183 ~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd-~~~~~~-~~~~~~-----~~~i~~~~~~~~~~-~l~~-~~~d~~i~i~  253 (343)
                      ...+..+.+.|-.. .++++-. ||.|.+|| .++-+. +..+.+     ...+..++|.|... .+++ .-..++|+++
T Consensus       195 Tk~vqG~tVdp~~~-nY~cs~~-dg~iAiwD~~rnienpl~~i~~~~N~~~~~l~~~aycPtrtglla~l~RdS~tIrly  272 (783)
T KOG1008|consen  195 TKYVQGITVDPFSP-NYFCSNS-DGDIAIWDTYRNIENPLQIILRNENKKPKQLFALAYCPTRTGLLAVLSRDSITIRLY  272 (783)
T ss_pred             hhhcccceecCCCC-Cceeccc-cCceeeccchhhhccHHHHHhhCCCCcccceeeEEeccCCcchhhhhccCcceEEEe
Confidence            44567788888332 5666655 99999999 333222 222222     23489999999643 3333 3446789999


Q ss_pred             Eeecc
Q psy10867        254 CLRQV  258 (343)
Q Consensus       254 d~~~~  258 (343)
                      |+...
T Consensus       273 di~~v  277 (783)
T KOG1008|consen  273 DICVV  277 (783)
T ss_pred             ccccc
Confidence            98754

>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment

Probab=98.77  E-value=5.6e-06  Score=69.70  Aligned_cols=218  Identities=14%  Similarity=0.074  Sum_probs=116.8

Q ss_pred             cceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEEecCCeEEEEEccCCceEEEecc
Q psy10867         38 SPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASS  117 (343)
Q Consensus        38 ~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~~  117 (343)
                      .+..+.++|+|++++.+++ |.-.|+.....+..     ..+.-..+.|.+.+++.+....+.|.++.--+.+....++.
T Consensus        34 ~p~~ls~npngr~v~V~g~-geY~iyt~~~~r~k-----~~G~g~~~vw~~~n~yAv~~~~~~I~I~kn~~~~~~k~i~~  107 (443)
T PF04053_consen   34 YPQSLSHNPNGRFVLVCGD-GEYEIYTALAWRNK-----AFGSGLSFVWSSRNRYAVLESSSTIKIYKNFKNEVVKSIKL  107 (443)
T ss_dssp             --SEEEE-TTSSEEEEEET-TEEEEEETTTTEEE-----EEEE-SEEEE-TSSEEEEE-TTS-EEEEETTEE-TT-----
T ss_pred             CCeeEEECCCCCEEEEEcC-CEEEEEEccCCccc-----ccCceeEEEEecCccEEEEECCCeEEEEEcCccccceEEcC
Confidence            6899999999999999777 88889884433322     13445678898877766666688899974222222222322


Q ss_pred             cCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCc
Q psy10867        118 HYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAK  197 (343)
Q Consensus       118 ~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  197 (343)
                      . ..+..+-.   |..|...+.+ .|.+||+.+++.+..+.                        -.+|..+.|++++  
T Consensus       108 ~-~~~~~If~---G~LL~~~~~~-~i~~yDw~~~~~i~~i~------------------------v~~vk~V~Ws~~g--  156 (443)
T PF04053_consen  108 P-FSVEKIFG---GNLLGVKSSD-FICFYDWETGKLIRRID------------------------VSAVKYVIWSDDG--  156 (443)
T ss_dssp             S-S-EEEEE----SSSEEEEETT-EEEEE-TTT--EEEEES------------------------S-E-EEEEE-TTS--
T ss_pred             C-cccceEEc---CcEEEEECCC-CEEEEEhhHcceeeEEe------------------------cCCCcEEEEECCC--
Confidence            1 12344333   7777776654 89999999986655442                        2248999999998  


Q ss_pred             eEEEEeeCCCeEEEEecCCC-----------ceEEEeec-CCcEEEEEEcCCCCEEEEEcCCCcEEEEEeeccccccccc
Q psy10867        198 SRVASVSHDRTCKIFDLCTG-----------EDLLSLIL-DTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHH  265 (343)
Q Consensus       198 ~~l~~~~~d~~i~~wd~~~~-----------~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~  265 (343)
                      .+++..+.+ .+.+++....           .....+.. ...|.+.+|..+  .++-.+.. .++-  +-.++      
T Consensus       157 ~~val~t~~-~i~il~~~~~~~~~~~~~g~e~~f~~~~E~~~~IkSg~W~~d--~fiYtT~~-~lkY--l~~Ge------  224 (443)
T PF04053_consen  157 ELVALVTKD-SIYILKYNLEAVAAIPEEGVEDAFELIHEISERIKSGCWVED--CFIYTTSN-HLKY--LVNGE------  224 (443)
T ss_dssp             SEEEEE-S--SEEEEEE-HHHHHHBTTTB-GGGEEEEEEE-S--SEEEEETT--EEEEE-TT-EEEE--EETTE------
T ss_pred             CEEEEEeCC-eEEEEEecchhcccccccCchhceEEEEEecceeEEEEEEcC--EEEEEcCC-eEEE--EEcCC------
Confidence            677777655 6777664332           13333333 778999999876  33333333 5655  33222      


Q ss_pred             ccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEeccc
Q psy10867        266 IQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTIS  310 (343)
Q Consensus       266 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~  310 (343)
                            ...+..-..++.=+.+.|..+.+.....|+.|..+.+..
T Consensus       225 ------~~~i~~ld~~~yllgy~~~~~~ly~~Dr~~~v~~~~ld~  263 (443)
T PF04053_consen  225 ------TGIIAHLDKPLYLLGYLPKENRLYLIDRDGNVISYELDL  263 (443)
T ss_dssp             ------EEEEEE-SS--EEEEEETTTTEEEEE-TT--EEEEE--H
T ss_pred             ------cceEEEcCCceEEEEEEccCCEEEEEECCCCEEEEEECH
Confidence                  112222245566677778777888888888888887654

This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.

>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]

Probab=98.75  E-value=7.2e-07  Score=74.68  Aligned_cols=202  Identities=14%  Similarity=-0.018  Sum_probs=125.2

Q ss_pred             eEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEec---CC-CeEEEeecCccceeeeeecCCCCCCCCccccccce
Q psy10867        100 KLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGG---ED-GTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEP  175 (343)
Q Consensus       100 ~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~---~d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (343)
                      .+.+-|.+ +...+.+......+..-+|+|++..++..+   .. ..+.++++.++......                  
T Consensus       174 ~l~~~D~d-g~~~~~l~~~~~~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~------------------  234 (425)
T COG0823         174 ELALGDYD-GYNQQKLTDSGSLILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVIL------------------  234 (425)
T ss_pred             eEEEEccC-CcceeEecccCcceeccccCcCCCceEEEEEecCCCceEEEEeccCCccceee------------------
Confidence            45555544 555556655566777889999988765542   22 46899999887543222                  


Q ss_pred             eeeecccccceEEEEeecCCCceEEEEeeCCCe--EEEEecCCCceEEEee-cCCcEEEEEEcCCCCEEEEEc-CCCc--
Q psy10867        176 LHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRT--CKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIYMGT-SEGV--  249 (343)
Q Consensus       176 ~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~--i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~-~d~~--  249 (343)
                        .   ..+.-...+|+|+|+ .++++...||.  |.++|+..++..+ +. ..+.-..-.|+|+|++++..+ ..|.  
T Consensus       235 --~---~~g~~~~P~fspDG~-~l~f~~~rdg~~~iy~~dl~~~~~~~-Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~  307 (425)
T COG0823         235 --N---FNGNNGAPAFSPDGS-KLAFSSSRDGSPDIYLMDLDGKNLPR-LTNGFGINTSPSWSPDGSKIVFTSDRGGRPQ  307 (425)
T ss_pred             --c---cCCccCCccCCCCCC-EEEEEECCCCCccEEEEcCCCCccee-cccCCccccCccCCCCCCEEEEEeCCCCCcc
Confidence              1   233344678999995 66667777776  5566777666333 43 333344778999999887654 4554  


Q ss_pred             EEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeC-CCc--EEEEecccceeeeecccCCceEEE
Q psy10867        250 IKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSA-DET--LKIWHTISRQCLRTIQHKGPVLGA  326 (343)
Q Consensus       250 i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~-dg~--i~iwd~~~~~~~~~~~~~~~v~~~  326 (343)
                      |.+.+.......            .+......-..-.|+|||++|+..+. +|.  |.+.|+.++..++.+.........
T Consensus       308 I~~~~~~g~~~~------------riT~~~~~~~~p~~SpdG~~i~~~~~~~g~~~i~~~~~~~~~~~~~lt~~~~~e~p  375 (425)
T COG0823         308 IYLYDLEGSQVT------------RLTFSGGGNSNPVWSPDGDKIVFESSSGGQWDIDKNDLASGGKIRILTSTYLNESP  375 (425)
T ss_pred             eEEECCCCCcee------------EeeccCCCCcCccCCCCCCEEEEEeccCCceeeEEeccCCCCcEEEccccccCCCC
Confidence            444444443221            11111222226789999999886664 344  666777666655666555556667


Q ss_pred             EEccCCCeeeecc
Q psy10867        327 FLGLLPPAIHDYD  339 (343)
Q Consensus       327 ~~sp~~~~l~~~~  339 (343)
                      .|.|+++.++..+
T Consensus       376 s~~~ng~~i~~~s  388 (425)
T COG0823         376 SWAPNGRMIMFSS  388 (425)
T ss_pred             CcCCCCceEEEec
Confidence            8888888877654

>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats

Probab=98.75  E-value=3e-06  Score=70.92  Aligned_cols=107  Identities=13%  Similarity=0.163  Sum_probs=76.8

Q ss_pred             ccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccc
Q psy10867        181 QHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPR  260 (343)
Q Consensus       181 ~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~  260 (343)
                      .....+.+.+++|+.  ..++.|+.||.|.+||...+... .....-.++.++|+|+|..+++|+..|.+.+||+.-...
T Consensus       257 pL~s~v~~ca~sp~E--~kLvlGC~DgSiiLyD~~~~~t~-~~ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~ALspi  333 (545)
T PF11768_consen  257 PLPSQVICCARSPSE--DKLVLGCEDGSIILYDTTRGVTL-LAKAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMALSPI  333 (545)
T ss_pred             ecCCcceEEecCccc--ceEEEEecCCeEEEEEcCCCeee-eeeecccceEEEEcCCCcEEEEEcCCceEEEEEeecCcc
Confidence            467789999999998  89999999999999998766333 234566789999999999999999999999999875443


Q ss_pred             cccccccCCCCCC-----ccccccCcEEEEEEccC
Q psy10867        261 TRDHHIQDSTSNP-----DFIGHEKQVTSLSCSIT  290 (343)
Q Consensus       261 ~~~~~~~~~~~~~-----~~~~~~~~v~~~~~s~~  290 (343)
                      ......++..+..     ..-.+...+..+.|.+.
T Consensus       334 ~~qLlsEd~~P~~~L~Ls~yf~~~~~L~~iqW~~~  368 (545)
T PF11768_consen  334 KMQLLSEDATPKSTLQLSKYFRVSSSLVHIQWAPA  368 (545)
T ss_pred             ceeeccccCCCccEEeeehhccCcchhheeEeccC
Confidence            3222212221111     11234445666777754

>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats

Probab=98.73  E-value=1.5e-06  Score=72.56  Aligned_cols=112  Identities=17%  Similarity=0.193  Sum_probs=80.7

Q ss_pred             ceEEEEeecCCCceEEEEe----eCCCe----EEEEecCCCce----EEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEE
Q psy10867        185 PVTHVTLSKLGAKSRVASV----SHDRT----CKIFDLCTGED----LLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKS  252 (343)
Q Consensus       185 ~v~~~~~~~~~~~~~l~~~----~~d~~----i~~wd~~~~~~----~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i  252 (343)
                      ...++.|+-..+ ..+.+.    +.+|.    -.+|++...+.    +..+..++.+.+++++|+...++.|+.||.|.+
T Consensus       207 dPl~~~Fs~~~~-~qi~tVE~s~s~~g~~~~d~ciYE~~r~klqrvsvtsipL~s~v~~ca~sp~E~kLvlGC~DgSiiL  285 (545)
T PF11768_consen  207 DPLDVEFSLNQP-YQIHTVEQSISVKGEPSADSCIYECSRNKLQRVSVTSIPLPSQVICCARSPSEDKLVLGCEDGSIIL  285 (545)
T ss_pred             CcEEEEccCCCC-cEEEEEEEecCCCCCceeEEEEEEeecCceeEEEEEEEecCCcceEEecCcccceEEEEecCCeEEE
Confidence            345677775443 344432    23333    34666655443    234457889999999999999999999999999


Q ss_pred             EEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEeccc
Q psy10867        253 FCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTIS  310 (343)
Q Consensus       253 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~  310 (343)
                      ||.....             .......-.++.++|+|+|.++++|+..|.+.+||+.-
T Consensus       286 yD~~~~~-------------t~~~ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~AL  330 (545)
T PF11768_consen  286 YDTTRGV-------------TLLAKAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMAL  330 (545)
T ss_pred             EEcCCCe-------------eeeeeecccceEEEEcCCCcEEEEEcCCceEEEEEeec
Confidence            9987542             12223345578899999999999999999999999753

>KOG1920|consensus

Probab=98.73  E-value=7.3e-06  Score=74.12  Aligned_cols=194  Identities=15%  Similarity=0.161  Sum_probs=124.8

Q ss_pred             cceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-ecCCeEEEEEc----cC----
Q psy10867         38 SPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQI----SS----  108 (343)
Q Consensus        38 ~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~----~~----  108 (343)
                      .|.++.|..+..-++.+...|.|.+-|.++.... ....-...|.+++||||+++++. ...+++.+-.-    -.    
T Consensus        70 ~i~s~~fl~d~~~i~v~~~~G~iilvd~et~~~e-ivg~vd~GI~aaswS~Dee~l~liT~~~tll~mT~~f~~i~E~~L  148 (1265)
T KOG1920|consen   70 EIVSVQFLADTNSICVITALGDIILVDPETLELE-IVGNVDNGISAASWSPDEELLALITGRQTLLFMTKDFEPIAEKPL  148 (1265)
T ss_pred             ceEEEEEecccceEEEEecCCcEEEEccccccee-eeeeccCceEEEeecCCCcEEEEEeCCcEEEEEeccccchhcccc
Confidence            7888999887766666666688999888776543 23345678999999999999886 45566555431    00    


Q ss_pred             ---------------CceEEEeccc---------------------CCCeEEEEEecCCCEEEEe-----cCCCeEEEee
Q psy10867        109 ---------------GRLLATASSH---------------------YQPITIVKWSADSNFIVTG-----GEDGTICVWQ  147 (343)
Q Consensus       109 ---------------~~~~~~~~~~---------------------~~~v~~~~~~~~~~~l~s~-----~~dg~i~iwd  147 (343)
                                     |+....+.+.                     .+.=+.+.|.-||+++++.     .....|++||
T Consensus       149 ~~d~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~~~~~~~~~~~~~IsWRgDg~~fAVs~~~~~~~~RkirV~d  228 (1265)
T KOG1920|consen  149 DADDERKSKFVNVGWGRKETQFRGSEGRQAARQKIEKEKALEQIEQDDHKTSISWRGDGEYFAVSFVESETGTRKIRVYD  228 (1265)
T ss_pred             ccccccccccceecccccceeeecchhhhcccccccccccccchhhccCCceEEEccCCcEEEEEEEeccCCceeEEEec
Confidence                           0101111110                     1112358999999999883     2337899999


Q ss_pred             cCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEe---eCCCeEEEEecCCCceEEEee
Q psy10867        148 LSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASV---SHDRTCKIFDLCTGEDLLSLI  224 (343)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~---~~d~~i~~wd~~~~~~~~~~~  224 (343)
                      -+ +....+                      -......=.+++|-|.|  .++++-   +.|+.|.+|. ++|-....+.
T Consensus       229 rE-g~Lns~----------------------se~~~~l~~~LsWkPsg--s~iA~iq~~~sd~~IvffE-rNGL~hg~f~  282 (1265)
T KOG1920|consen  229 RE-GALNST----------------------SEPVEGLQHSLSWKPSG--SLIAAIQCKTSDSDIVFFE-RNGLRHGEFV  282 (1265)
T ss_pred             cc-chhhcc----------------------cCcccccccceeecCCC--CeEeeeeecCCCCcEEEEe-cCCccccccc
Confidence            87 321110                      01122233478999988  677764   3456799997 4554433332


Q ss_pred             ----cC-CcEEEEEEcCCCCEEEE---EcCCCcEEEEEeecc
Q psy10867        225 ----LD-TRLTCVAFDGTEDNIYM---GTSEGVIKSFCLRQV  258 (343)
Q Consensus       225 ----~~-~~i~~~~~~~~~~~l~~---~~~d~~i~i~d~~~~  258 (343)
                          .+ ..+..++|+.++..|++   ......|++|-+.+.
T Consensus       283 l~~p~de~~ve~L~Wns~sdiLAv~~~~~e~~~v~lwt~~Ny  324 (1265)
T KOG1920|consen  283 LPFPLDEKEVEELAWNSNSDILAVVTSNLENSLVQLWTTGNY  324 (1265)
T ss_pred             cCCcccccchheeeecCCCCceeeeecccccceEEEEEecCe
Confidence                22 33899999999999998   455556999987764

>KOG2114|consensus

Probab=98.71  E-value=4.9e-06  Score=72.49  Aligned_cols=203  Identities=12%  Similarity=0.139  Sum_probs=132.0

Q ss_pred             ECCCCCEEEE-ecCCeEEEEEccCCceEEEecccCCC-eEEEEEecCCCEEEEecCCCe-----EEEeecCccceeeeee
Q psy10867         86 ASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQP-ITIVKWSADSNFIVTGGEDGT-----ICVWQLSRLICKQTVA  158 (343)
Q Consensus        86 ~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~s~~~dg~-----i~iwd~~~~~~~~~~~  158 (343)
                      |++.+..++. +.+|.|.+++ +.-+.++.++.+... |..+....+.++|++.+.|+.     +++|+++.......  
T Consensus        31 ~~s~~~~vvigt~~G~V~~Ln-~s~~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~~n~s--  107 (933)
T KOG2114|consen   31 CSSSTGSVVIGTADGRVVILN-SSFQLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVDKNNS--  107 (933)
T ss_pred             EcCCCceEEEeeccccEEEec-ccceeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccCCCCC--
Confidence            4566666664 6789888887 334455777777776 554544444468888776654     89999976421110  


Q ss_pred             cCCCCCCCCcccccccee--eeec-----ccccceEEEEeecCCCceEEEEeeCCCeEEEEecCC----C-ceEEEeecC
Q psy10867        159 FGIPGSSGKGVTGLTEPL--HVKS-----QHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCT----G-EDLLSLILD  226 (343)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~--~~~~-----~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~----~-~~~~~~~~~  226 (343)
                                    ...+  ....     ....++.+++++.+-  +.+|.|-.+|.|.++.-+-    + +........
T Consensus       108 --------------P~c~~~~ri~~~~np~~~~p~s~l~Vs~~l--~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~  171 (933)
T KOG2114|consen  108 --------------PQCLYEHRIFTIKNPTNPSPASSLAVSEDL--KTIVCGFTNGLVICYKGDILRDRGSRQDYSHRGK  171 (933)
T ss_pred             --------------cceeeeeeeeccCCCCCCCcceEEEEEccc--cEEEEEecCcEEEEEcCcchhccccceeeeccCC
Confidence                          0011  1111     235678899999987  8999999999999985321    1 122222357


Q ss_pred             CcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEE
Q psy10867        227 TRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIW  306 (343)
Q Consensus       227 ~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw  306 (343)
                      .+|+.+++..+++.++.......|.+|.+.... +.         ...+..|...+.|..+++....+++++.. .+.+|
T Consensus       172 ~pITgL~~~~d~~s~lFv~Tt~~V~~y~l~gr~-p~---------~~~ld~~G~~lnCss~~~~t~qfIca~~e-~l~fY  240 (933)
T KOG2114|consen  172 EPITGLALRSDGKSVLFVATTEQVMLYSLSGRT-PS---------LKVLDNNGISLNCSSFSDGTYQFICAGSE-FLYFY  240 (933)
T ss_pred             CCceeeEEecCCceeEEEEecceeEEEEecCCC-cc---------eeeeccCCccceeeecCCCCccEEEecCc-eEEEE
Confidence            789999999999874444446678999988433 11         33466777889999988766545555543 68999


Q ss_pred             ecccceeeeecc
Q psy10867        307 HTISRQCLRTIQ  318 (343)
Q Consensus       307 d~~~~~~~~~~~  318 (343)
                      +......-..|.
T Consensus       241 ~sd~~~~cfaf~  252 (933)
T KOG2114|consen  241 DSDGRGPCFAFE  252 (933)
T ss_pred             cCCCcceeeeec
Confidence            987555545554

>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]

Probab=98.70  E-value=4.7e-05  Score=60.99  Aligned_cols=213  Identities=13%  Similarity=0.101  Sum_probs=127.4

Q ss_pred             EEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecc-----cCCcce
Q psy10867          7 VAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRL-----ICPGRI   81 (343)
Q Consensus         7 ~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~-----~~~~~v   81 (343)
                      +.|+-=..+.|.-|+..+++ ...+..... ......+..++.++++...   +.+++.+++.....+.     ......
T Consensus        39 L~w~DI~~~~i~r~~~~~g~-~~~~~~p~~-~~~~~~~d~~g~Lv~~~~g---~~~~~~~~~~~~t~~~~~~~~~~~~r~  113 (307)
T COG3386          39 LLWVDILGGRIHRLDPETGK-KRVFPSPGG-FSSGALIDAGGRLIACEHG---VRLLDPDTGGKITLLAEPEDGLPLNRP  113 (307)
T ss_pred             EEEEeCCCCeEEEecCCcCc-eEEEECCCC-cccceeecCCCeEEEEccc---cEEEeccCCceeEEeccccCCCCcCCC
Confidence            34444445666667665443 223333332 2233344445555555443   6777766555422211     122456


Q ss_pred             EEEEECCCCCEEEEecC------------CeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecC-CCeEEEeec
Q psy10867         82 SSMQASPDAAYIAVSIE------------TKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGE-DGTICVWQL  148 (343)
Q Consensus        82 ~~~~~s~~~~~l~~~~d------------~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-dg~i~iwd~  148 (343)
                      +.+...|+|.+.++...            |.|+.++. .+..+..+..+-..-+.|+|+||++.|+.+.. .+.|.-|++
T Consensus       114 ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p-~g~~~~l~~~~~~~~NGla~SpDg~tly~aDT~~~~i~r~~~  192 (307)
T COG3386         114 NDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDP-DGGVVRLLDDDLTIPNGLAFSPDGKTLYVADTPANRIHRYDL  192 (307)
T ss_pred             CceeEcCCCCEEEeCCCccccCccccCCcceEEEEcC-CCCEEEeecCcEEecCceEECCCCCEEEEEeCCCCeEEEEec
Confidence            78889999998887322            33444443 56666666665566678999999987776654 477888877


Q ss_pred             Cc--cceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCC-eEEEEecCCCceEEEeec
Q psy10867        149 SR--LICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDR-TCKIFDLCTGEDLLSLIL  225 (343)
Q Consensus       149 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~-~i~~wd~~~~~~~~~~~~  225 (343)
                      ..  +....                 ...........+..-.++...+|  .+.+++...| .|.+|+.+ ++.+..+..
T Consensus       193 d~~~g~~~~-----------------~~~~~~~~~~~G~PDG~~vDadG--~lw~~a~~~g~~v~~~~pd-G~l~~~i~l  252 (307)
T COG3386         193 DPATGPIGG-----------------RRGFVDFDEEPGLPDGMAVDADG--NLWVAAVWGGGRVVRFNPD-GKLLGEIKL  252 (307)
T ss_pred             CcccCccCC-----------------cceEEEccCCCCCCCceEEeCCC--CEEEecccCCceEEEECCC-CcEEEEEEC
Confidence            63  11100                 01223333355667778888888  5665554444 99999977 999999887


Q ss_pred             C-CcEEEEEEcC-CCCEEEEEc
Q psy10867        226 D-TRLTCVAFDG-TEDNIYMGT  245 (343)
Q Consensus       226 ~-~~i~~~~~~~-~~~~l~~~~  245 (343)
                      + ..+++++|-- +.+.|++.+
T Consensus       253 P~~~~t~~~FgG~~~~~L~iTs  274 (307)
T COG3386         253 PVKRPTNPAFGGPDLNTLYITS  274 (307)
T ss_pred             CCCCCccceEeCCCcCEEEEEe
Confidence            6 7788888853 445555543

>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]

Probab=98.70  E-value=3e-06  Score=71.07  Aligned_cols=203  Identities=15%  Similarity=0.121  Sum_probs=125.8

Q ss_pred             CeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEE---cCC-CeEEEEeCCCcccceecccCCcceEEEEECCCC
Q psy10867         15 GAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVE---KGK-PMIQAWPVNSQEKAQLRLICPGRISSMQASPDA   90 (343)
Q Consensus        15 g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~---~~~-~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~   90 (343)
                      ..+.+=|.. |...+.+..... .+..-+|+|++..++..   ... ..+.++++++++...... ..+.-...+|+|||
T Consensus       173 ~~l~~~D~d-g~~~~~l~~~~~-~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~-~~g~~~~P~fspDG  249 (425)
T COG0823         173 YELALGDYD-GYNQQKLTDSGS-LILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVILN-FNGNNGAPAFSPDG  249 (425)
T ss_pred             ceEEEEccC-CcceeEecccCc-ceeccccCcCCCceEEEEEecCCCceEEEEeccCCccceeec-cCCccCCccCCCCC
Confidence            445555544 555555555555 77888999988554332   332 368999999888765543 34455677899999


Q ss_pred             CEEEE--ecCC--eEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecC-CCe--EEEeecCccceeeeeecCCCC
Q psy10867         91 AYIAV--SIET--KLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGE-DGT--ICVWQLSRLICKQTVAFGIPG  163 (343)
Q Consensus        91 ~~l~~--~~d~--~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-dg~--i~iwd~~~~~~~~~~~~~~~~  163 (343)
                      +.|+-  ..|+  .|+++|+.+++..+ +....+.-..-.|+|||+.++-.+. .|.  |.+.+.+....          
T Consensus       250 ~~l~f~~~rdg~~~iy~~dl~~~~~~~-Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~----------  318 (425)
T COG0823         250 SKLAFSSSRDGSPDIYLMDLDGKNLPR-LTNGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQV----------  318 (425)
T ss_pred             CEEEEEECCCCCccEEEEcCCCCccee-cccCCccccCccCCCCCCEEEEEeCCCCCcceEEECCCCCce----------
Confidence            98885  3444  68888988776433 5444444446789999998876654 444  55556655422          


Q ss_pred             CCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeC-CCe--EEEEecCCCceEEEeecCCcEEEEEEcCCCCE
Q psy10867        164 SSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSH-DRT--CKIFDLCTGEDLLSLILDTRLTCVAFDGTEDN  240 (343)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~-d~~--i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~  240 (343)
                                   ..+......-..-.++|+|  ++++..+. +|.  |.+.|+.++...+.+..........+.|+++.
T Consensus       319 -------------~riT~~~~~~~~p~~SpdG--~~i~~~~~~~g~~~i~~~~~~~~~~~~~lt~~~~~e~ps~~~ng~~  383 (425)
T COG0823         319 -------------TRLTFSGGGNSNPVWSPDG--DKIVFESSSGGQWDIDKNDLASGGKIRILTSTYLNESPSWAPNGRM  383 (425)
T ss_pred             -------------eEeeccCCCCcCccCCCCC--CEEEEEeccCCceeeEEeccCCCCcEEEccccccCCCCCcCCCCce
Confidence                         1111122222277899999  55555443 454  66777766665444444555556677888877


Q ss_pred             EEEEcC
Q psy10867        241 IYMGTS  246 (343)
Q Consensus       241 l~~~~~  246 (343)
                      +...+.
T Consensus       384 i~~~s~  389 (425)
T COG0823         384 IMFSSG  389 (425)
T ss_pred             EEEecc
Confidence            666443

>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []

Probab=98.69  E-value=1.4e-05  Score=61.71  Aligned_cols=200  Identities=13%  Similarity=0.119  Sum_probs=113.3

Q ss_pred             EecccCCCeEEEEEecCCC-EEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEee
Q psy10867        114 TASSHYQPITIVKWSADSN-FIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLS  192 (343)
Q Consensus       114 ~~~~~~~~v~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  192 (343)
                      .+.+-...+..++|.|+.+ ++++....+.|...+.. ++.++.+.                    +.+ ......|++.
T Consensus        16 ~l~g~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~~-G~vlr~i~--------------------l~g-~~D~EgI~y~   73 (248)
T PF06977_consen   16 PLPGILDELSGLTYNPDTGTLFAVQDEPGEIYELSLD-GKVLRRIP--------------------LDG-FGDYEGITYL   73 (248)
T ss_dssp             E-TT--S-EEEEEEETTTTEEEEEETTTTEEEEEETT---EEEEEE---------------------SS--SSEEEEEE-
T ss_pred             ECCCccCCccccEEcCCCCeEEEEECCCCEEEEEcCC-CCEEEEEe--------------------CCC-CCCceeEEEE
Confidence            4555566799999999755 66666778888888875 44444332                    122 3567788888


Q ss_pred             cCCCceEEEEeeCCCeEEEEecCCCc------eEEEee------cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccc
Q psy10867        193 KLGAKSRVASVSHDRTCKIFDLCTGE------DLLSLI------LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPR  260 (343)
Q Consensus       193 ~~~~~~~l~~~~~d~~i~~wd~~~~~------~~~~~~------~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~  260 (343)
                      .++  .++++--.++.+.++++....      ....+.      .+..+..++|+|.++.|+++-...-..+|.++....
T Consensus        74 g~~--~~vl~~Er~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~  151 (248)
T PF06977_consen   74 GNG--RYVLSEERDQRLYIFTIDDDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFPG  151 (248)
T ss_dssp             STT--EEEEEETTTTEEEEEEE----TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT-
T ss_pred             CCC--EEEEEEcCCCcEEEEEEeccccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEccccC
Confidence            777  677766668999999884321      112222      234589999999999888887777777887765221


Q ss_pred             cccccccCCCCCCccccccCcEEEEEEccC-CCEEEEEeCCCcEEEEecccceeeeecc-cC---------CceEEEEEc
Q psy10867        261 TRDHHIQDSTSNPDFIGHEKQVTSLSCSIT-GITLLSSSADETLKIWHTISRQCLRTIQ-HK---------GPVLGAFLG  329 (343)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~---------~~v~~~~~s  329 (343)
                      .....................+.+++++|. +++++-...+..|..+| .+|+.+..+. ..         ...-.++|.
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~d~S~l~~~p~t~~lliLS~es~~l~~~d-~~G~~~~~~~L~~g~~gl~~~~~QpEGIa~d  230 (248)
T PF06977_consen  152 GFDLFVSDDQDLDDDKLFVRDLSGLSYDPRTGHLLILSDESRLLLELD-RQGRVVSSLSLDRGFHGLSKDIPQPEGIAFD  230 (248)
T ss_dssp             SS--EEEE-HHHH-HT--SS---EEEEETTTTEEEEEETTTTEEEEE--TT--EEEEEE-STTGGG-SS---SEEEEEE-
T ss_pred             ccceeeccccccccccceeccccceEEcCCCCeEEEEECCCCeEEEEC-CCCCEEEEEEeCCcccCcccccCCccEEEEC
Confidence            110000000000001123345788999996 45666777788899999 6788777665 22         246789999


Q ss_pred             cCCCeeeec
Q psy10867        330 LLPPAIHDY  338 (343)
Q Consensus       330 p~~~~l~~~  338 (343)
                      ++|+..+++
T Consensus       231 ~~G~LYIvs  239 (248)
T PF06977_consen  231 PDGNLYIVS  239 (248)
T ss_dssp             TT--EEEEE
T ss_pred             CCCCEEEEc
Confidence            999777665

Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.

>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A

Probab=98.69  E-value=0.0001  Score=59.90  Aligned_cols=282  Identities=12%  Similarity=0.027  Sum_probs=130.5

Q ss_pred             ecCCceEEEEEecCCC----CcceEEEEeCCc-eEEEEEcCCC--eEEEEeCCCcccceecccCCcceEEEEECCCCCEE
Q psy10867         21 EPKGGTLLMSYKGASV----LSPHSMCLLGND-YVLGVEKGKP--MIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYI   93 (343)
Q Consensus        21 d~~~~~~~~~~~~~~~----~~v~~~~~~~~~-~~~~~~~~~~--~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l   93 (343)
                      |..||..+..+.....    +-.+.=+|.+|| +++.++..+|  .+.+.|+.+++..+...+.........++|+++.+
T Consensus        16 D~~TG~~VtrLT~~~~~~h~~YF~~~~ft~dG~kllF~s~~dg~~nly~lDL~t~~i~QLTdg~g~~~~g~~~s~~~~~~   95 (386)
T PF14583_consen   16 DPDTGHRVTRLTPPDGHSHRLYFYQNCFTDDGRKLLFASDFDGNRNLYLLDLATGEITQLTDGPGDNTFGGFLSPDDRAL   95 (386)
T ss_dssp             -TTT--EEEE-S-TTS-EE---TTS--B-TTS-EEEEEE-TTSS-EEEEEETTT-EEEE---SS-B-TTT-EE-TTSSEE
T ss_pred             CCCCCceEEEecCCCCcccceeecCCCcCCCCCEEEEEeccCCCcceEEEEcccCEEEECccCCCCCccceEEecCCCeE
Confidence            6778888888776543    022233566787 6666666555  56667899988777655433333345667888777


Q ss_pred             E-EecCCeEEEEEccCCceEEEecccCCCeEEEEEec--CCCEEEEecC----------------------CCeEEEeec
Q psy10867         94 A-VSIETKLHMWQISSGRLLATASSHYQPITIVKWSA--DSNFIVTGGE----------------------DGTICVWQL  148 (343)
Q Consensus        94 ~-~~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~s~~~----------------------dg~i~iwd~  148 (343)
                      + ...+..|+-.|+++.+....+......+-...|..  ++..++-.-.                      ...|.--|+
T Consensus        96 ~Yv~~~~~l~~vdL~T~e~~~vy~~p~~~~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~idl  175 (386)
T PF14583_consen   96 YYVKNGRSLRRVDLDTLEERVVYEVPDDWKGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEARPHCRIFTIDL  175 (386)
T ss_dssp             EEEETTTEEEEEETTT--EEEEEE--TTEEEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC---EEEEEEET
T ss_pred             EEEECCCeEEEEECCcCcEEEEEECCcccccccceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhCCCceEEEEEC
Confidence            6 45567899999999887666666666555566643  4554432211                      111222233


Q ss_pred             CccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeC---CC-eEEEEecC-CCceEEEe
Q psy10867        149 SRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSH---DR-TCKIFDLC-TGEDLLSL  223 (343)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~---d~-~i~~wd~~-~~~~~~~~  223 (343)
                      .++                       ....+-.....+..+.|+|..+ .+|+-+-+   +. .-|+|-++ .+...+.+
T Consensus       176 ~tG-----------------------~~~~v~~~~~wlgH~~fsP~dp-~li~fCHEGpw~~Vd~RiW~i~~dg~~~~~v  231 (386)
T PF14583_consen  176 KTG-----------------------ERKVVFEDTDWLGHVQFSPTDP-TLIMFCHEGPWDLVDQRIWTINTDGSNVKKV  231 (386)
T ss_dssp             TT-------------------------EEEEEEESS-EEEEEEETTEE-EEEEEEE-S-TTTSS-SEEEEETTS---EES
T ss_pred             CCC-----------------------ceeEEEecCccccCcccCCCCC-CEEEEeccCCcceeceEEEEEEcCCCcceee
Confidence            322                       2223333456677889999874 44444322   22 12555443 23333333


Q ss_pred             e-c--CCcEEEEEEcCCCCEEEEE-c----CCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEE
Q psy10867        224 I-L--DTRLTCVAFDGTEDNIYMG-T----SEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLL  295 (343)
Q Consensus       224 ~-~--~~~i~~~~~~~~~~~l~~~-~----~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~  295 (343)
                      . +  ...+..=-|.|+|..|..- .    .+..|.-+|+.+.+...            + ....+-..+..++||++++
T Consensus       232 ~~~~~~e~~gHEfw~~DG~~i~y~~~~~~~~~~~i~~~d~~t~~~~~------------~-~~~p~~~H~~ss~Dg~L~v  298 (386)
T PF14583_consen  232 HRRMEGESVGHEFWVPDGSTIWYDSYTPGGQDFWIAGYDPDTGERRR------------L-MEMPWCSHFMSSPDGKLFV  298 (386)
T ss_dssp             S---TTEEEEEEEE-TTSS-EEEEEEETTT--EEEEEE-TTT--EEE------------E-EEE-SEEEEEE-TTSSEEE
T ss_pred             ecCCCCcccccccccCCCCEEEEEeecCCCCceEEEeeCCCCCCceE------------E-EeCCceeeeEEcCCCCEEE
Confidence            3 1  2235555689998866542 1    23344455555432211            1 1112344566678998877


Q ss_pred             EEeCCC----------------cEEEEecccceeeeecccC---------C--ceEEEEEccCCCeeeecc
Q psy10867        296 SSSADE----------------TLKIWHTISRQCLRTIQHK---------G--PVLGAFLGLLPPAIHDYD  339 (343)
Q Consensus       296 s~~~dg----------------~i~iwd~~~~~~~~~~~~~---------~--~v~~~~~sp~~~~l~~~~  339 (343)
                      -=+.|.                -|++++++.++......|.         .  .=....|+|||++++-.+
T Consensus       299 GDG~d~p~~v~~~~~~~~~~~p~i~~~~~~~~~~~~l~~h~~sw~v~~~~~q~~hPhp~FSPDgk~VlF~S  369 (386)
T PF14583_consen  299 GDGGDAPVDVADAGGYKIENDPWIYLFDVEAGRFRKLARHDTSWKVLDGDRQVTHPHPSFSPDGKWVLFRS  369 (386)
T ss_dssp             EEE-------------------EEEEEETTTTEEEEEEE-------BTTBSSTT----EE-TTSSEEEEEE
T ss_pred             ecCCCCCccccccccceecCCcEEEEeccccCceeeeeeccCcceeecCCCccCCCCCccCCCCCEEEEEC
Confidence            444432                4667788766543222121         1  125689999999977543

>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex

Probab=98.68  E-value=3e-05  Score=65.29  Aligned_cols=179  Identities=13%  Similarity=0.042  Sum_probs=95.1

Q ss_pred             eEEEEeCCCcccceecccCCcceEEEEECCCCCEEEEecCCeEEEEEccCCceEEEec-------ccCCCeEEEEEecCC
Q psy10867         59 MIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATAS-------SHYQPITIVKWSADS  131 (343)
Q Consensus        59 ~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~-------~~~~~v~~~~~~~~~  131 (343)
                      .|+||+............. +.+.++.|+.+.++++...||.+++||+. |+....+.       -....+....+..+|
T Consensus        62 ~I~iys~sG~ll~~i~w~~-~~iv~~~wt~~e~LvvV~~dG~v~vy~~~-G~~~fsl~~~i~~~~v~e~~i~~~~~~~~G  139 (410)
T PF04841_consen   62 SIQIYSSSGKLLSSIPWDS-GRIVGMGWTDDEELVVVQSDGTVRVYDLF-GEFQFSLGEEIEEEKVLECRIFAIWFYKNG  139 (410)
T ss_pred             EEEEECCCCCEeEEEEECC-CCEEEEEECCCCeEEEEEcCCEEEEEeCC-CceeechhhhccccCcccccccccccCCCC
Confidence            5999987655433333233 89999999998888888999999999986 44311111       111222222333355


Q ss_pred             CEEEEecCCCeEEEeecCccc-eeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEE
Q psy10867        132 NFIVTGGEDGTICVWQLSRLI-CKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCK  210 (343)
Q Consensus       132 ~~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~  210 (343)
                      -.++  ..++.+.+..-.... ..+... ..+           ........+........++.+.  ...+....++.+.
T Consensus       140 ivvL--t~~~~~~~v~n~~~~~~~~~~~-~~p-----------~~~~~~~~~~~~~~i~~l~~~~--~~~i~~~~g~~i~  203 (410)
T PF04841_consen  140 IVVL--TGNNRFYVVNNIDEPVKLRRLP-EIP-----------GLWTKFHWWPSWTVIPLLSSDR--VVEILLANGETIY  203 (410)
T ss_pred             EEEE--CCCCeEEEEeCccccchhhccc-cCC-----------CcccccccccccccceEeecCc--ceEEEEecCCEEE
Confidence            3333  334444433222211 101000 000           0000000011110012233333  3444555556666


Q ss_pred             EEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecc
Q psy10867        211 IFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQV  258 (343)
Q Consensus       211 ~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~  258 (343)
                      +.+-...+.   +...+++..+++||+++++|.-..+|.+.+.+..-.
T Consensus       204 ~i~~~~~~~---i~~~~~i~~iavSpng~~iAl~t~~g~l~v~ssDf~  248 (410)
T PF04841_consen  204 IIDENSFKQ---IDSDGPIIKIAVSPNGKFIALFTDSGNLWVVSSDFS  248 (410)
T ss_pred             EEEcccccc---ccCCCCeEEEEECCCCCEEEEEECCCCEEEEECccc
Confidence            444332211   334578999999999999999999999988875543

Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm

>PRK02888 nitrous-oxide reductase; Validated

Probab=98.67  E-value=2.1e-05  Score=67.69  Aligned_cols=181  Identities=15%  Similarity=0.106  Sum_probs=111.5

Q ss_pred             CCceEE-EEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEEe-cC----CeEEEEEccCCceEEEecccC
Q psy10867         46 GNDYVL-GVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVS-IE----TKLHMWQISSGRLLATASSHY  119 (343)
Q Consensus        46 ~~~~~~-~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~d----~~i~v~~~~~~~~~~~~~~~~  119 (343)
                      |||+.+ ......+.+.+.|.++.+....... .+....++++|+|+++.++ .+    .++...+..+...+..+.-. 
T Consensus       202 nDGk~l~~~~ey~~~vSvID~etmeV~~qV~V-dgnpd~v~~spdGk~afvTsyNsE~G~tl~em~a~e~d~~vvfni~-  279 (635)
T PRK02888        202 NDGKDLDDPKKYRSLFTAVDAETMEVAWQVMV-DGNLDNVDTDYDGKYAFSTCYNSEEGVTLAEMMAAERDWVVVFNIA-  279 (635)
T ss_pred             CCCCEeecccceeEEEEEEECccceEEEEEEe-CCCcccceECCCCCEEEEeccCcccCcceeeeccccCceEEEEchH-
Confidence            455433 2233336777778777665533322 2345678899999988864 22    23333333222212111110 


Q ss_pred             CCeEEEEEecCCCEEEEecCCCeEEEeecCc-----cceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecC
Q psy10867        120 QPITIVKWSADSNFIVTGGEDGTICVWQLSR-----LICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKL  194 (343)
Q Consensus       120 ~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  194 (343)
                       .+  -++.++|++...+  ++.|.+.|..+     ......+                       .-......+.++|+
T Consensus       280 -~i--ea~vkdGK~~~V~--gn~V~VID~~t~~~~~~~v~~yI-----------------------PVGKsPHGV~vSPD  331 (635)
T PRK02888        280 -RI--EEAVKAGKFKTIG--GSKVPVVDGRKAANAGSALTRYV-----------------------PVPKNPHGVNTSPD  331 (635)
T ss_pred             -HH--HHhhhCCCEEEEC--CCEEEEEECCccccCCcceEEEE-----------------------ECCCCccceEECCC
Confidence             00  1234577766653  57899999887     2222222                       23455678999999


Q ss_pred             CCceEEEEeeCCCeEEEEecCCCce------------EEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeec
Q psy10867        195 GAKSRVASVSHDRTCKIFDLCTGED------------LLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQ  257 (343)
Q Consensus       195 ~~~~~l~~~~~d~~i~~wd~~~~~~------------~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~  257 (343)
                      |. ..++++..+.++.+.|+.+.+.            ..+..........+|+++|+...+-.-|..|..|++..
T Consensus       332 Gk-ylyVanklS~tVSVIDv~k~k~~~~~~~~~~~~vvaevevGlGPLHTaFDg~G~aytslf~dsqv~kwn~~~  405 (635)
T PRK02888        332 GK-YFIANGKLSPTVTVIDVRKLDDLFDGKIKPRDAVVAEPELGLGPLHTAFDGRGNAYTTLFLDSQIVKWNIEA  405 (635)
T ss_pred             CC-EEEEeCCCCCcEEEEEChhhhhhhhccCCccceEEEeeccCCCcceEEECCCCCEEEeEeecceeEEEehHH
Confidence            94 4555566699999999988653            34444555667889999998777788899999999886

>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins

Probab=98.66  E-value=7.7e-06  Score=72.79  Aligned_cols=141  Identities=9%  Similarity=0.064  Sum_probs=100.2

Q ss_pred             EEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeC------CceEEEEEcCCCeEEEEeCCCcc--ccee---cc
Q psy10867          7 VAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLG------NDYVLGVEKGKPMIQAWPVNSQE--KAQL---RL   75 (343)
Q Consensus         7 ~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~------~~~~~~~~~~~~~i~iw~~~~~~--~~~~---~~   75 (343)
                      ++.++.....|+-.|+++|+.+..++.+...+|..++-..      +...+. |-++..+..||..-..  .+..   ..
T Consensus       496 il~~~~~~~~ly~mDLe~GKVV~eW~~~~~~~v~~~~p~~K~aqlt~e~tfl-Gls~n~lfriDpR~~~~k~v~~~~k~Y  574 (794)
T PF08553_consen  496 ILLDPNNPNKLYKMDLERGKVVEEWKVHDDIPVVDIAPDSKFAQLTNEQTFL-GLSDNSLFRIDPRLSGNKLVDSQSKQY  574 (794)
T ss_pred             EeecCCCCCceEEEecCCCcEEEEeecCCCcceeEecccccccccCCCceEE-EECCCceEEeccCCCCCceeecccccc
Confidence            4555666788999999999999999999864566655431      123333 3344789999977432  2211   11


Q ss_pred             cCCcceEEEEECCCCCEEEEecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecC
Q psy10867         76 ICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLS  149 (343)
Q Consensus        76 ~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~  149 (343)
                      .......|++-+.+|.+.+++.+|.|++||--..+....+.+-..+|..|..+.||++++..+. ..+.+++..
T Consensus       575 ~~~~~Fs~~aTt~~G~iavgs~~G~IRLyd~~g~~AKT~lp~lG~pI~~iDvt~DGkwilaTc~-tyLlLi~t~  647 (794)
T PF08553_consen  575 SSKNNFSCFATTEDGYIAVGSNKGDIRLYDRLGKRAKTALPGLGDPIIGIDVTADGKWILATCK-TYLLLIDTL  647 (794)
T ss_pred             ccCCCceEEEecCCceEEEEeCCCcEEeecccchhhhhcCCCCCCCeeEEEecCCCcEEEEeec-ceEEEEEEe
Confidence            3445688999999998888899999999994332333456677889999999999999887665 678888764

Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].

>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment

Probab=98.66  E-value=5.6e-05  Score=63.82  Aligned_cols=215  Identities=12%  Similarity=0.093  Sum_probs=108.2

Q ss_pred             CCcceEEEEECCCCCEEEEecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeee
Q psy10867         77 CPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQT  156 (343)
Q Consensus        77 ~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~  156 (343)
                      .......+.++|+|++++.+.+|...+|.....+....     +.-...+|.+.+ .+|+-...+.|.++.--+......
T Consensus        31 ~~~~p~~ls~npngr~v~V~g~geY~iyt~~~~r~k~~-----G~g~~~vw~~~n-~yAv~~~~~~I~I~kn~~~~~~k~  104 (443)
T PF04053_consen   31 CEIYPQSLSHNPNGRFVLVCGDGEYEIYTALAWRNKAF-----GSGLSFVWSSRN-RYAVLESSSTIKIYKNFKNEVVKS  104 (443)
T ss_dssp             -SS--SEEEE-TTSSEEEEEETTEEEEEETTTTEEEEE-----EE-SEEEE-TSS-EEEEE-TTS-EEEEETTEE-TT--
T ss_pred             CCcCCeeEEECCCCCEEEEEcCCEEEEEEccCCccccc-----CceeEEEEecCc-cEEEEECCCeEEEEEcCccccceE
Confidence            34457889999999999999999999998544443322     233568898854 466666688899963222211111


Q ss_pred             eecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCCcEEEEEEcC
Q psy10867        157 VAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDG  236 (343)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~  236 (343)
                      +                      . ....+..+-.   |  .+|...+.+ .|.+||..+++.+..+.... |..+.|++
T Consensus       105 i----------------------~-~~~~~~~If~---G--~LL~~~~~~-~i~~yDw~~~~~i~~i~v~~-vk~V~Ws~  154 (443)
T PF04053_consen  105 I----------------------K-LPFSVEKIFG---G--NLLGVKSSD-FICFYDWETGKLIRRIDVSA-VKYVIWSD  154 (443)
T ss_dssp             --------------------------SS-EEEEE----S--SSEEEEETT-EEEEE-TTT--EEEEESS-E--EEEEE-T
T ss_pred             E----------------------c-CCcccceEEc---C--cEEEEECCC-CEEEEEhhHcceeeEEecCC-CcEEEEEC
Confidence            1                      0 1112233322   5  566655544 89999999999999988664 89999999


Q ss_pred             CCCEEEEEcCCCcEEEEEeecccccccccccCCC--CCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceee
Q psy10867        237 TEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDST--SNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCL  314 (343)
Q Consensus       237 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~--~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~  314 (343)
                      ++.+++..+.+ .+.+++........  ....+-  ....+..-...|.+.+|..+  .++-.+.. .|+.  +..|+. 
T Consensus       155 ~g~~val~t~~-~i~il~~~~~~~~~--~~~~g~e~~f~~~~E~~~~IkSg~W~~d--~fiYtT~~-~lkY--l~~Ge~-  225 (443)
T PF04053_consen  155 DGELVALVTKD-SIYILKYNLEAVAA--IPEEGVEDAFELIHEISERIKSGCWVED--CFIYTTSN-HLKY--LVNGET-  225 (443)
T ss_dssp             TSSEEEEE-S--SEEEEEE-HHHHHH--BTTTB-GGGEEEEEEE-S--SEEEEETT--EEEEE-TT-EEEE--EETTEE-
T ss_pred             CCCEEEEEeCC-eEEEEEecchhccc--ccccCchhceEEEEEecceeEEEEEEcC--EEEEEcCC-eEEE--EEcCCc-
Confidence            99999998755 67777765431000  000000  01112222456778888765  33333333 6665  333332 


Q ss_pred             eecc-cCCceEEEEEccCCCeee
Q psy10867        315 RTIQ-HKGPVLGAFLGLLPPAIH  336 (343)
Q Consensus       315 ~~~~-~~~~v~~~~~sp~~~~l~  336 (343)
                      ..+. ...++.=+...|+.+.++
T Consensus       226 ~~i~~ld~~~yllgy~~~~~~ly  248 (443)
T PF04053_consen  226 GIIAHLDKPLYLLGYLPKENRLY  248 (443)
T ss_dssp             EEEEE-SS--EEEEEETTTTEEE
T ss_pred             ceEEEcCCceEEEEEEccCCEEE
Confidence            2222 234455555555444443

This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.

>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1

Probab=98.65  E-value=9.3e-05  Score=58.94  Aligned_cols=234  Identities=11%  Similarity=0.128  Sum_probs=135.5

Q ss_pred             CeEEEEecCCceEEEEEecCCC------CcceEEEEeCCceEEEEEc--CCCeEEEEeCCCcccceecccCCcceEEEEE
Q psy10867         15 GAISVWEPKGGTLLMSYKGASV------LSPHSMCLLGNDYVLGVEK--GKPMIQAWPVNSQEKAQLRLICPGRISSMQA   86 (343)
Q Consensus        15 g~i~iwd~~~~~~~~~~~~~~~------~~v~~~~~~~~~~~~~~~~--~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~   86 (343)
                      ..|.+||..+.++...+.-...      .....++++.|++++....  -...|.|-|+..++.+... .-++...-.- 
T Consensus        67 Dvv~~~D~~TL~~~~EI~iP~k~R~~~~~~~~~~~ls~dgk~~~V~N~TPa~SVtVVDl~~~kvv~ei-~~PGC~~iyP-  144 (342)
T PF06433_consen   67 DVVEIWDTQTLSPTGEIEIPPKPRAQVVPYKNMFALSADGKFLYVQNFTPATSVTVVDLAAKKVVGEI-DTPGCWLIYP-  144 (342)
T ss_dssp             EEEEEEETTTTEEEEEEEETTS-B--BS--GGGEEE-TTSSEEEEEEESSSEEEEEEETTTTEEEEEE-EGTSEEEEEE-
T ss_pred             eEEEEEecCcCcccceEecCCcchheecccccceEEccCCcEEEEEccCCCCeEEEEECCCCceeeee-cCCCEEEEEe-
Confidence            4789999999888776543321      1345667888887766643  2357888898888877544 2233322222 


Q ss_pred             CCCCCEEEEecCCeEEEEEcc-CCceEEEe----cccCCCeE-EEEEecCCCEEEEecCCCeEEEeecCccceeeeeecC
Q psy10867         87 SPDAAYIAVSIETKLHMWQIS-SGRLLATA----SSHYQPIT-IVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFG  160 (343)
Q Consensus        87 s~~~~~l~~~~d~~i~v~~~~-~~~~~~~~----~~~~~~v~-~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~  160 (343)
                      +++..+.+.|.||.+.-..+. .|+..++.    .....++. .-++...+..++--+.+|.|+--|+............
T Consensus       145 ~~~~~F~~lC~DGsl~~v~Ld~~Gk~~~~~t~~F~~~~dp~f~~~~~~~~~~~~~F~Sy~G~v~~~dlsg~~~~~~~~~~  224 (342)
T PF06433_consen  145 SGNRGFSMLCGDGSLLTVTLDADGKEAQKSTKVFDPDDDPLFEHPAYSRDGGRLYFVSYEGNVYSADLSGDSAKFGKPWS  224 (342)
T ss_dssp             EETTEEEEEETTSCEEEEEETSTSSEEEEEEEESSTTTS-B-S--EEETTTTEEEEEBTTSEEEEEEETTSSEEEEEEEE
T ss_pred             cCCCceEEEecCCceEEEEECCCCCEeEeeccccCCCCcccccccceECCCCeEEEEecCCEEEEEeccCCcccccCccc
Confidence            223445556899999998887 45554322    12222332 3344445555665788899999988776432211100


Q ss_pred             CCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeC---C-------CeEEEEecCCCceEEEeecCCcEE
Q psy10867        161 IPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSH---D-------RTCKIFDLCTGEDLLSLILDTRLT  230 (343)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~---d-------~~i~~wd~~~~~~~~~~~~~~~i~  230 (343)
                      .....         . ..-.-..+.-.-+++++..  +.|+..-.   +       ..|.++|+.+++.+..+..+.++.
T Consensus       225 ~~t~~---------e-~~~~WrPGG~Q~~A~~~~~--~rlyvLMh~g~~gsHKdpgteVWv~D~~t~krv~Ri~l~~~~~  292 (342)
T PF06433_consen  225 LLTDA---------E-KADGWRPGGWQLIAYHAAS--GRLYVLMHQGGEGSHKDPGTEVWVYDLKTHKRVARIPLEHPID  292 (342)
T ss_dssp             SS-HH---------H-HHTTEEE-SSS-EEEETTT--TEEEEEEEE--TT-TTS-EEEEEEEETTTTEEEEEEEEEEEES
T ss_pred             ccCcc---------c-cccCcCCcceeeeeecccc--CeEEEEecCCCCCCccCCceEEEEEECCCCeEEEEEeCCCccc
Confidence            00000         0 0000011223346666554  23332211   1       258888999999999999888899


Q ss_pred             EEEEcCCCC-EEEEE-cCCCcEEEEEeecccccc
Q psy10867        231 CVAFDGTED-NIYMG-TSEGVIKSFCLRQVPRTR  262 (343)
Q Consensus       231 ~~~~~~~~~-~l~~~-~~d~~i~i~d~~~~~~~~  262 (343)
                      ++..+.+.+ +|++. ..++.+.+||..+++...
T Consensus       293 Si~Vsqd~~P~L~~~~~~~~~l~v~D~~tGk~~~  326 (342)
T PF06433_consen  293 SIAVSQDDKPLLYALSAGDGTLDVYDAATGKLVR  326 (342)
T ss_dssp             EEEEESSSS-EEEEEETTTTEEEEEETTT--EEE
T ss_pred             eEEEccCCCcEEEEEcCCCCeEEEEeCcCCcEEe
Confidence            999999876 55543 457899999999865543

4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....

>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases

Probab=98.65  E-value=0.00014  Score=63.21  Aligned_cols=211  Identities=8%  Similarity=-0.063  Sum_probs=116.8

Q ss_pred             CceEEEEEcCCCeEEEEeCCCcccceecccCCc------ce-E-EEEECCCCCEEEEecCCeEEEEEccCCceEEEeccc
Q psy10867         47 NDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPG------RI-S-SMQASPDAAYIAVSIETKLHMWQISSGRLLATASSH  118 (343)
Q Consensus        47 ~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~------~v-~-~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~~~  118 (343)
                      ++++++...+ +.+.-.|..+++.+........      .+ . .+....++..++.+.++.|+-+|.++|+.+-.+...
T Consensus        61 ~g~vy~~~~~-g~l~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~g~~~~~~~~V~v~~~~g~v~AlD~~TG~~~W~~~~~  139 (488)
T cd00216          61 DGDMYFTTSH-SALFALDAATGKVLWRYDPKLPADRGCCDVVNRGVAYWDPRKVFFGTFDGRLVALDAETGKQVWKFGNN  139 (488)
T ss_pred             CCEEEEeCCC-CcEEEEECCCChhhceeCCCCCccccccccccCCcEEccCCeEEEecCCCeEEEEECCCCCEeeeecCC
Confidence            5665555544 8999999999887743322111      00 0 112221256666678999999999999998776543


Q ss_pred             CCC--eEEEEEec--CCCEEEEec---------CCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccc-c
Q psy10867        119 YQP--ITIVKWSA--DSNFIVTGG---------EDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHS-L  184 (343)
Q Consensus       119 ~~~--v~~~~~~~--~~~~l~s~~---------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  184 (343)
                      ...  -..+.-+|  .+..++.++         .+|.+..+|..+++.................   .........+. .
T Consensus       140 ~~~~~~~~i~ssP~v~~~~v~vg~~~~~~~~~~~~g~v~alD~~TG~~~W~~~~~~~~~~~~~~---~~~~~~~~~~~g~  216 (488)
T cd00216         140 DQVPPGYTMTGAPTIVKKLVIIGSSGAEFFACGVRGALRAYDVETGKLLWRFYTTEPDPNAFPT---WGPDRQMWGPGGG  216 (488)
T ss_pred             CCcCcceEecCCCEEECCEEEEeccccccccCCCCcEEEEEECCCCceeeEeeccCCCcCCCCC---CCCCcceecCCCC
Confidence            221  01111112  224455554         3678999999999888776532111000000   00000000011 1


Q ss_pred             ce-EEEEeecCCCceEEEEeeCCC------------------eEEEEecCCCceEEEeecCC-cE------EEEEEc---
Q psy10867        185 PV-THVTLSKLGAKSRVASVSHDR------------------TCKIFDLCTGEDLLSLILDT-RL------TCVAFD---  235 (343)
Q Consensus       185 ~v-~~~~~~~~~~~~~l~~~~~d~------------------~i~~wd~~~~~~~~~~~~~~-~i------~~~~~~---  235 (343)
                      .+ ...++.+.+  ..++.++.++                  .+.-+|..+|+.+..++... ..      ....+.   
T Consensus       217 ~vw~~pa~d~~~--g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~tG~~~W~~~~~~~~~~~~~~~s~p~~~~~~  294 (488)
T cd00216         217 TSWASPTYDPKT--NLVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDADTGKVKWFYQTTPHDLWDYDGPNQPSLADIK  294 (488)
T ss_pred             CccCCeeEeCCC--CEEEEECCCCCCCccCCccCCCCCCceeeEEEEcCCCCCEEEEeeCCCCCCcccccCCCCeEEecc
Confidence            11 123444444  4666666554                  79999999999998876321 11      111111   


Q ss_pred             -CCCC---EEEEEcCCCcEEEEEeeccccccc
Q psy10867        236 -GTED---NIYMGTSEGVIKSFCLRQVPRTRD  263 (343)
Q Consensus       236 -~~~~---~l~~~~~d~~i~i~d~~~~~~~~~  263 (343)
                       -++.   .+++++.+|.++.+|.++++....
T Consensus       295 ~~~g~~~~~V~~g~~~G~l~ald~~tG~~~W~  326 (488)
T cd00216         295 PKDGKPVPAIVHAPKNGFFYVLDRTTGKLISA  326 (488)
T ss_pred             ccCCCeeEEEEEECCCceEEEEECCCCcEeeE
Confidence             1333   678888999999999998776544

The alignment model contains an 8-bladed beta-propeller.

>COG3391 Uncharacterized conserved protein [Function unknown]

Probab=98.65  E-value=0.00017  Score=60.47  Aligned_cols=280  Identities=12%  Similarity=0.110  Sum_probs=178.1

Q ss_pred             EEEEecCCceEEEEEecCCCCcceEEEEeCCc-eEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE
Q psy10867         17 ISVWEPKGGTLLMSYKGASVLSPHSMCLLGND-YVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV   95 (343)
Q Consensus        17 i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~   95 (343)
                      +.+++..+.+....+..+.  ....+...|++ .+.++......+...+................-..++.++++..+..
T Consensus        13 ~~v~~~~~~~~~~~~~~~~--~~~~v~~~~~g~~~~v~~~~~~~~~~~~~~~n~~~~~~~~g~~~p~~i~v~~~~~~vyv   90 (381)
T COG3391          13 VSVINTGTNKVTAAISLGR--GPGGVAVNPDGTQVYVANSGSNDVSVIDATSNTVTQSLSVGGVYPAGVAVNPAGNKVYV   90 (381)
T ss_pred             eEEEeecccEEEEEeecCC--CCceeEEcCccCEEEEEeecCceeeecccccceeeeeccCCCccccceeeCCCCCeEEE
Confidence            7778877777666666555  56778888887 33333333234555554422211211111133457788888875554


Q ss_pred             --ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecC---CCeEEEeecCccceeeeeecCCCCCCCCccc
Q psy10867         96 --SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGE---DGTICVWQLSRLICKQTVAFGIPGSSGKGVT  170 (343)
Q Consensus        96 --~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~---dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  170 (343)
                        ..++.|.+.|..+.+.......-. ....++++|+++.+..+..   ++.+.+.|-.+........            
T Consensus        91 ~~~~~~~v~vid~~~~~~~~~~~vG~-~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~~~~------------  157 (381)
T COG3391          91 TTGDSNTVSVIDTATNTVLGSIPVGL-GPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTATIP------------  157 (381)
T ss_pred             ecCCCCeEEEEcCcccceeeEeeecc-CCceEEECCCCCEEEEEecccCCceEEEEeCCCCeEEEEEe------------
Confidence              457899999987777766554322 5678999999987776655   6888888888776544321            


Q ss_pred             cccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEE-----EeecCCcEEEEEEcCCCCEEEEEc
Q psy10867        171 GLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLL-----SLILDTRLTCVAFDGTEDNIYMGT  245 (343)
Q Consensus       171 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~-----~~~~~~~i~~~~~~~~~~~l~~~~  245 (343)
                                .-..+ ..+++.|++. ..+++-..++.+.+.|........     ..........+.++|+++++++..
T Consensus       158 ----------vG~~P-~~~a~~p~g~-~vyv~~~~~~~v~vi~~~~~~v~~~~~~~~~~~~~~P~~i~v~~~g~~~yV~~  225 (381)
T COG3391         158 ----------VGNTP-TGVAVDPDGN-KVYVTNSDDNTVSVIDTSGNSVVRGSVGSLVGVGTGPAGIAVDPDGNRVYVAN  225 (381)
T ss_pred             ----------cCCCc-ceEEECCCCC-eEEEEecCCCeEEEEeCCCcceeccccccccccCCCCceEEECCCCCEEEEEe
Confidence                      11123 7899999994 355555689999999977665553     133345567899999999887765


Q ss_pred             CC---CcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEe-CCCcEEEEecccceeeeeccc--
Q psy10867        246 SE---GVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSS-ADETLKIWHTISRQCLRTIQH--  319 (343)
Q Consensus       246 ~d---~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~--  319 (343)
                      ..   +.+...|..........         ...+.. ....+..+|+|+.+.... ..+.+.+-|..+.+....+..  
T Consensus       226 ~~~~~~~v~~id~~~~~v~~~~---------~~~~~~-~~~~v~~~p~g~~~yv~~~~~~~V~vid~~~~~v~~~~~~~~  295 (381)
T COG3391         226 DGSGSNNVLKIDTATGNVTATD---------LPVGSG-APRGVAVDPAGKAAYVANSQGGTVSVIDGATDRVVKTGPTGN  295 (381)
T ss_pred             ccCCCceEEEEeCCCceEEEec---------cccccC-CCCceeECCCCCEEEEEecCCCeEEEEeCCCCceeeeecccc
Confidence            44   58888887764432210         011111 345688999999888774 448899999888777776552  


Q ss_pred             --CCceEEEEEccCCC
Q psy10867        320 --KGPVLGAFLGLLPP  333 (343)
Q Consensus       320 --~~~v~~~~~sp~~~  333 (343)
                        ...+..+++.+...
T Consensus       296 ~~~~~~~~~~~~~~~~  311 (381)
T COG3391         296 EALGEPVSIAISPLYD  311 (381)
T ss_pred             cccccceeccceeecc
Confidence              22355555555433

>KOG2066|consensus

Probab=98.63  E-value=1.2e-05  Score=69.52  Aligned_cols=180  Identities=14%  Similarity=0.194  Sum_probs=127.0

Q ss_pred             cceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCCceEEEec
Q psy10867         38 SPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATAS  116 (343)
Q Consensus        38 ~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~  116 (343)
                      .+.|++++  +++++-|..+|.+++++.+...  .....|...      ..+|.++++ +.||.|.|-.+-+.+....+.
T Consensus        41 ~is~~av~--~~~~~~GtH~g~v~~~~~~~~~--~~~~~~s~~------~~~Gey~asCS~DGkv~I~sl~~~~~~~~~d  110 (846)
T KOG2066|consen   41 AISCCAVH--DKFFALGTHRGAVYLTTCQGNP--KTNFDHSSS------ILEGEYVASCSDDGKVVIGSLFTDDEITQYD  110 (846)
T ss_pred             HHHHHHhh--cceeeeccccceEEEEecCCcc--ccccccccc------ccCCceEEEecCCCcEEEeeccCCccceeEe
Confidence            55666664  5788888888999999877543  223344333      568999997 678999999998888776664


Q ss_pred             ccCCCeEEEEEecC-----CCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEe
Q psy10867        117 SHYQPITIVKWSAD-----SNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTL  191 (343)
Q Consensus       117 ~~~~~v~~~~~~~~-----~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  191 (343)
                       ...++.+++++|+     .+++++|+.-| +.++.-+-.....                   . ..+....++|.++.|
T Consensus       111 -f~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~-------------------~-v~l~~~eG~I~~i~W  168 (846)
T KOG2066|consen  111 -FKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKD-------------------S-VVLSEGEGPIHSIKW  168 (846)
T ss_pred             -cCCcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCcc-------------------c-eeeecCccceEEEEe
Confidence             4568999999997     56899999988 7776543221111                   1 134556789999999


Q ss_pred             ecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCC-------cEEEEEEcCCCCEEEEEcCCCcEEEEEee
Q psy10867        192 SKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDT-------RLTCVAFDGTEDNIYMGTSEGVIKSFCLR  256 (343)
Q Consensus       192 ~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~-------~i~~~~~~~~~~~l~~~~~d~~i~i~d~~  256 (343)
                      ..    +++|-++.+| +++||..+++.+..+..+.       -...+.|.++. .|+.| ...+|+|..++
T Consensus       169 ~g----~lIAWand~G-v~vyd~~~~~~l~~i~~p~~~~R~e~fpphl~W~~~~-~LVIG-W~d~v~i~~I~  233 (846)
T KOG2066|consen  169 RG----NLIAWANDDG-VKVYDTPTRQRLTNIPPPSQSVRPELFPPHLHWQDED-RLVIG-WGDSVKICSIK  233 (846)
T ss_pred             cC----cEEEEecCCC-cEEEeccccceeeccCCCCCCCCcccCCCceEecCCC-eEEEe-cCCeEEEEEEe
Confidence            65    5787777666 8999999988887776322       24456776654 44444 45578888887

>KOG2114|consensus

Probab=98.62  E-value=2.4e-05  Score=68.35  Aligned_cols=193  Identities=12%  Similarity=0.130  Sum_probs=122.5

Q ss_pred             EEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcc-eEEEEECCCCCEEEE-ecCC-----eEEEEEccCC------
Q psy10867         43 CLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGR-ISSMQASPDAAYIAV-SIET-----KLHMWQISSG------  109 (343)
Q Consensus        43 ~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~-v~~~~~s~~~~~l~~-~~d~-----~i~v~~~~~~------  109 (343)
                      ++++++..++.|+.+|.|.+.+-. -+.++.+..+... |..+....+..+|++ +.|.     .+++|+++.-      
T Consensus        30 c~~s~~~~vvigt~~G~V~~Ln~s-~~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~~n~sP  108 (933)
T KOG2114|consen   30 CCSSSTGSVVIGTADGRVVILNSS-FQLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVDKNNSP  108 (933)
T ss_pred             EEcCCCceEEEeeccccEEEeccc-ceeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccCCCCCc
Confidence            466788888888888888777632 2223455555555 444444434467776 5442     6999998643      


Q ss_pred             ceE--EEecc-----cCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeeccc
Q psy10867        110 RLL--ATASS-----HYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQH  182 (343)
Q Consensus       110 ~~~--~~~~~-----~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (343)
                      .++  ..+..     ...++.+++.+.+-+.+++|-.+|.|..+.-+-.+-..                  .........
T Consensus       109 ~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrg------------------sr~~~~~~~  170 (933)
T KOG2114|consen  109 QCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRG------------------SRQDYSHRG  170 (933)
T ss_pred             ceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcchhccc------------------cceeeeccC
Confidence            222  11222     34578899999999999999999999988533211100                  022223345


Q ss_pred             ccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCce-EEEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeec
Q psy10867        183 SLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGED-LLSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQ  257 (343)
Q Consensus       183 ~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~-~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~  257 (343)
                      ..+|+.+++..++.  .++.+.....|.+|.+....+ ...+. ++.+..|..+++....+++++ +..+.+|+...
T Consensus       171 ~~pITgL~~~~d~~--s~lFv~Tt~~V~~y~l~gr~p~~~~ld~~G~~lnCss~~~~t~qfIca~-~e~l~fY~sd~  244 (933)
T KOG2114|consen  171 KEPITGLALRSDGK--SVLFVATTEQVMLYSLSGRTPSLKVLDNNGISLNCSSFSDGTYQFICAG-SEFLYFYDSDG  244 (933)
T ss_pred             CCCceeeEEecCCc--eeEEEEecceeEEEEecCCCcceeeeccCCccceeeecCCCCccEEEec-CceEEEEcCCC
Confidence            68999999999884  423334456789998874332 23233 566788999988766566654 45688888765

>KOG1645|consensus

Probab=98.61  E-value=4e-07  Score=72.05  Aligned_cols=150  Identities=15%  Similarity=0.188  Sum_probs=105.4

Q ss_pred             eeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCCcEEEEEEcCCC-CEEEEEcCCCcEEEE
Q psy10867        175 PLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTE-DNIYMGTSEGVIKSF  253 (343)
Q Consensus       175 ~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~i~  253 (343)
                      ....+..+...|..++|+|..+ .++..++.+..|++.|+++...+..+.....+++++|.-+. .++++|..+|.|.+|
T Consensus       185 ssq~lp~~g~~IrdlafSp~~~-GLl~~asl~nkiki~dlet~~~vssy~a~~~~wSC~wDlde~h~IYaGl~nG~Vlvy  263 (463)
T KOG1645|consen  185 SSQILPGEGSFIRDLAFSPFNE-GLLGLASLGNKIKIMDLETSCVVSSYIAYNQIWSCCWDLDERHVIYAGLQNGMVLVY  263 (463)
T ss_pred             hhhcccccchhhhhhccCcccc-ceeeeeccCceEEEEecccceeeeheeccCCceeeeeccCCcceeEEeccCceEEEE
Confidence            3446667888999999999874 47889999999999999999999999888999999999876 578889999999999


Q ss_pred             EeecccccccccccCCCCCCcccc--ccCcEEEEE------EccCCCEEEEEeCCCcEEEEeccc--ce--eeeecccCC
Q psy10867        254 CLRQVPRTRDHHIQDSTSNPDFIG--HEKQVTSLS------CSITGITLLSSSADETLKIWHTIS--RQ--CLRTIQHKG  321 (343)
Q Consensus       254 d~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~------~s~~~~~l~s~~~dg~i~iwd~~~--~~--~~~~~~~~~  321 (343)
                      |++..+....          .+.+  ...+|..++      ..+-|.+|+..+.+  +..|++.-  +.  ++..++..+
T Consensus       264 D~R~~~~~~~----------e~~a~~t~~pv~~i~~~~~n~~f~~gglLv~~lt~--l~f~ei~~s~~~~p~vlele~pG  331 (463)
T KOG1645|consen  264 DMRQPEGPLM----------ELVANVTINPVHKIAPVQPNKIFTSGGLLVFALTV--LQFYEIVFSAECLPCVLELEPPG  331 (463)
T ss_pred             EccCCCchHh----------hhhhhhccCcceeecccCccccccccceEEeeehh--hhhhhhhccccCCCcccccCCCc
Confidence            9998654321          1111  122333332      23445566655554  55666542  22  233334567


Q ss_pred             ceEEEEEccCCCeeee
Q psy10867        322 PVLGAFLGLLPPAIHD  337 (343)
Q Consensus       322 ~v~~~~~sp~~~~l~~  337 (343)
                      ...++...+-.+.++.
T Consensus       332 ~cismqy~~~snh~l~  347 (463)
T KOG1645|consen  332 ICISMQYHGVSNHLLL  347 (463)
T ss_pred             ceeeeeecCccceEEE
Confidence            7778888876666543

>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]

Probab=98.56  E-value=9.9e-05  Score=59.17  Aligned_cols=225  Identities=10%  Similarity=-0.006  Sum_probs=130.7

Q ss_pred             EECCCCCEEE-E-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCC
Q psy10867         85 QASPDAAYIA-V-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIP  162 (343)
Q Consensus        85 ~~s~~~~~l~-~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~  162 (343)
                      .|.++...|. + -..+.|.-|+..+++.. .+. +.+.+.++.....+..|+++..  .+.+++..++.....+.    
T Consensus        31 ~w~~~~~~L~w~DI~~~~i~r~~~~~g~~~-~~~-~p~~~~~~~~~d~~g~Lv~~~~--g~~~~~~~~~~~~t~~~----  102 (307)
T COG3386          31 VWDPDRGALLWVDILGGRIHRLDPETGKKR-VFP-SPGGFSSGALIDAGGRLIACEH--GVRLLDPDTGGKITLLA----  102 (307)
T ss_pred             cCcCCCCEEEEEeCCCCeEEEecCCcCceE-EEE-CCCCcccceeecCCCeEEEEcc--ccEEEeccCCceeEEec----
Confidence            4666666444 4 35788999998776532 232 2333455554444555555443  35666665443321111    


Q ss_pred             CCCCCccccccceeeeec-ccccceEEEEeecCCCceEEEEeeC-----------CCeEEEEecCCCceEEEeec-CCcE
Q psy10867        163 GSSGKGVTGLTEPLHVKS-QHSLPVTHVTLSKLGAKSRVASVSH-----------DRTCKIFDLCTGEDLLSLIL-DTRL  229 (343)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~l~~~~~-----------d~~i~~wd~~~~~~~~~~~~-~~~i  229 (343)
                                    .... ......+.+.+.|+|  .+.++...           -|.++.+|. .+.....+.. -...
T Consensus       103 --------------~~~~~~~~~r~ND~~v~pdG--~~wfgt~~~~~~~~~~~~~~G~lyr~~p-~g~~~~l~~~~~~~~  165 (307)
T COG3386         103 --------------EPEDGLPLNRPNDGVVDPDG--RIWFGDMGYFDLGKSEERPTGSLYRVDP-DGGVVRLLDDDLTIP  165 (307)
T ss_pred             --------------cccCCCCcCCCCceeEcCCC--CEEEeCCCccccCccccCCcceEEEEcC-CCCEEEeecCcEEec
Confidence                          0011 122456677888888  44444332           133444443 4444444433 4456


Q ss_pred             EEEEEcCCCCEEEEEcC-CCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCC-cEEEEe
Q psy10867        230 TCVAFDGTEDNIYMGTS-EGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADE-TLKIWH  307 (343)
Q Consensus       230 ~~~~~~~~~~~l~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg-~i~iwd  307 (343)
                      +.++||||++.|+.+.. .+.|+.|++......    .........+....+..-.++...+|.+.+++..+| .|.+|+
T Consensus       166 NGla~SpDg~tly~aDT~~~~i~r~~~d~~~g~----~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~~~g~~v~~~~  241 (307)
T COG3386         166 NGLAFSPDGKTLYVADTPANRIHRYDLDPATGP----IGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAVWGGGRVVRFN  241 (307)
T ss_pred             CceEECCCCCEEEEEeCCCCeEEEEecCcccCc----cCCcceEEEccCCCCCCCceEEeCCCCEEEecccCCceEEEEC
Confidence            78999999998888755 578888887641100    000111122223456667788888998876555554 999999


Q ss_pred             cccceeeeecc-cCCceEEEEEc-cCCCeeeecc
Q psy10867        308 TISRQCLRTIQ-HKGPVLGAFLG-LLPPAIHDYD  339 (343)
Q Consensus       308 ~~~~~~~~~~~-~~~~v~~~~~s-p~~~~l~~~~  339 (343)
                      .. |+++..+. +...+++++|- |+.+.|+..+
T Consensus       242 pd-G~l~~~i~lP~~~~t~~~FgG~~~~~L~iTs  274 (307)
T COG3386         242 PD-GKLLGEIKLPVKRPTNPAFGGPDLNTLYITS  274 (307)
T ss_pred             CC-CcEEEEEECCCCCCccceEeCCCcCEEEEEe
Confidence            87 99999998 54778888885 5566665544

>KOG4649|consensus

Probab=98.54  E-value=0.00016  Score=54.66  Aligned_cols=141  Identities=9%  Similarity=-0.017  Sum_probs=88.6

Q ss_pred             eEEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceE-EE
Q psy10867          6 EVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRIS-SM   84 (343)
Q Consensus         6 ~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~-~~   84 (343)
                      .++|-++..+.+.--|..+|+....-....  .+.+-+.- -|.+++.|...|.+.+.+.++++....+... +.|. ..
T Consensus        24 T~v~igSHs~~~~avd~~sG~~~We~ilg~--RiE~sa~v-vgdfVV~GCy~g~lYfl~~~tGs~~w~f~~~-~~vk~~a   99 (354)
T KOG4649|consen   24 TLVVIGSHSGIVIAVDPQSGNLIWEAILGV--RIECSAIV-VGDFVVLGCYSGGLYFLCVKTGSQIWNFVIL-ETVKVRA   99 (354)
T ss_pred             eEEEEecCCceEEEecCCCCcEEeehhhCc--eeeeeeEE-ECCEEEEEEccCcEEEEEecchhheeeeeeh-hhhccce
Confidence            567777888888889999998877644333  22222222 2444666666699999999999766544322 2222 23


Q ss_pred             EECCCCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCc
Q psy10867         85 QASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSR  150 (343)
Q Consensus        85 ~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~  150 (343)
                      ...+++.++.+ +.|++.+..|..+..++...+-..+...+-+..|-...|+.+...|.+.--..+.
T Consensus       100 ~~d~~~glIycgshd~~~yalD~~~~~cVykskcgG~~f~sP~i~~g~~sly~a~t~G~vlavt~~~  166 (354)
T KOG4649|consen  100 QCDFDGGLIYCGSHDGNFYALDPKTYGCVYKSKCGGGTFVSPVIAPGDGSLYAAITAGAVLAVTKNP  166 (354)
T ss_pred             EEcCCCceEEEecCCCcEEEecccccceEEecccCCceeccceecCCCceEEEEeccceEEEEccCC
Confidence            34567877776 6899999999999888887664444444455566233344444456554444443

>KOG1008|consensus

Probab=98.54  E-value=7.3e-08  Score=80.70  Aligned_cols=206  Identities=17%  Similarity=0.225  Sum_probs=128.4

Q ss_pred             CcceEEEEECCCC--CEEEE-ecCCeEEEEEccCCce--EEEecccCCCeEEEEEec-CCCEEEEec----CCCeEEEee
Q psy10867         78 PGRISSMQASPDA--AYIAV-SIETKLHMWQISSGRL--LATASSHYQPITIVKWSA-DSNFIVTGG----EDGTICVWQ  147 (343)
Q Consensus        78 ~~~v~~~~~s~~~--~~l~~-~~d~~i~v~~~~~~~~--~~~~~~~~~~v~~~~~~~-~~~~l~s~~----~dg~i~iwd  147 (343)
                      ...+.|+++..+.  .++++ ..+|.|.+-.++....  .....+|....++++|++ |.+.||.|-    .|..+.|||
T Consensus        56 tqy~kcva~~y~~d~cIlavG~atG~I~l~s~r~~hdSs~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwd  135 (783)
T KOG1008|consen   56 TQYVKCVASFYGNDRCILAVGSATGNISLLSVRHPHDSSAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWD  135 (783)
T ss_pred             CCCceeehhhcCCchhhhhhccccCceEEeecCCcccccceecccccccccccccccccHHHHHhhhhhhcccCCcccee
Confidence            3456677765543  35555 4678888887765432  234567888999999998 667777764    366799999


Q ss_pred             cCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCC
Q psy10867        148 LSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDT  227 (343)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~  227 (343)
                      +.+.-....-                .+.. ..+......+++|..+.  +++.+|.....+.++|++........-...
T Consensus       136 i~s~ltvPke----------------~~~f-s~~~l~gqns~cwlrd~--klvlaGm~sr~~~ifdlRqs~~~~~svnTk  196 (783)
T KOG1008|consen  136 INSLLTVPKE----------------SPLF-SSSTLDGQNSVCWLRDT--KLVLAGMTSRSVHIFDLRQSLDSVSSVNTK  196 (783)
T ss_pred             cccccCCCcc----------------cccc-ccccccCccccccccCc--chhhcccccchhhhhhhhhhhhhhhhhhhh
Confidence            9886321110                0100 01123344588888776  788899999999999998433222222233


Q ss_pred             cEEEEEEcC-CCCEEEEEcCCCcEEEEE-eecccccccccccCCCCCCccccccCcEEEEEEccCCC-EEEEEeCC-CcE
Q psy10867        228 RLTCVAFDG-TEDNIYMGTSEGVIKSFC-LRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGI-TLLSSSAD-ETL  303 (343)
Q Consensus       228 ~i~~~~~~~-~~~~l~~~~~d~~i~i~d-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~s~~~d-g~i  303 (343)
                      .+..+..+| .+++++.-. ||.|.+|| .++.+.+...-      +..-......+..++|.|... .+++.+.| ++|
T Consensus       197 ~vqG~tVdp~~~nY~cs~~-dg~iAiwD~~rnienpl~~i------~~~~N~~~~~l~~~aycPtrtglla~l~RdS~tI  269 (783)
T KOG1008|consen  197 YVQGITVDPFSPNYFCSNS-DGDIAIWDTYRNIENPLQII------LRNENKKPKQLFALAYCPTRTGLLAVLSRDSITI  269 (783)
T ss_pred             hcccceecCCCCCceeccc-cCceeeccchhhhccHHHHH------hhCCCCcccceeeEEeccCCcchhhhhccCcceE
Confidence            566677888 667776655 99999999 44433322110      000001122488999999643 56666554 789


Q ss_pred             EEEecc
Q psy10867        304 KIWHTI  309 (343)
Q Consensus       304 ~iwd~~  309 (343)
                      +++|+.
T Consensus       270 rlydi~  275 (783)
T KOG1008|consen  270 RLYDIC  275 (783)
T ss_pred             EEeccc
Confidence            999875

>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins

Probab=98.53  E-value=9.1e-06  Score=72.35  Aligned_cols=133  Identities=9%  Similarity=0.163  Sum_probs=91.2

Q ss_pred             EEEeeCCCeEEEEecCCCceEEEeecCCcEEEEEEcCC-------CCEEEEEcCCCcEEEEEeecccccccccccCCCCC
Q psy10867        200 VASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGT-------EDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSN  272 (343)
Q Consensus       200 l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~-------~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~  272 (343)
                      |........|+-.|++.|+.+..+..+..+.-..+.|+       ....++|-.+..+..||.+-......     ....
T Consensus       497 l~~~~~~~~ly~mDLe~GKVV~eW~~~~~~~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v-----~~~~  571 (794)
T PF08553_consen  497 LLDPNNPNKLYKMDLERGKVVEEWKVHDDIPVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLV-----DSQS  571 (794)
T ss_pred             eecCCCCCceEEEecCCCcEEEEeecCCCcceeEecccccccccCCCceEEEECCCceEEeccCCCCCcee-----eccc
Confidence            33344568899999999999999986554434455553       34567888899999999985431100     0001


Q ss_pred             CccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc-cCCceEEEEEccCCCeeeecc
Q psy10867        273 PDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVLGAFLGLLPPAIHDYD  339 (343)
Q Consensus       273 ~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~  339 (343)
                      ..+ ......+|++-+.+| +||.|+.+|.||+||-...+.-..+. ...+|.++..+.||++|++.+
T Consensus       572 k~Y-~~~~~Fs~~aTt~~G-~iavgs~~G~IRLyd~~g~~AKT~lp~lG~pI~~iDvt~DGkwilaTc  637 (794)
T PF08553_consen  572 KQY-SSKNNFSCFATTEDG-YIAVGSNKGDIRLYDRLGKRAKTALPGLGDPIIGIDVTADGKWILATC  637 (794)
T ss_pred             ccc-ccCCCceEEEecCCc-eEEEEeCCCcEEeecccchhhhhcCCCCCCCeeEEEecCCCcEEEEee
Confidence            111 234457777776665 79999999999999943323223343 578999999999999998765

Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].

>KOG3621|consensus

Probab=98.50  E-value=0.00013  Score=62.57  Aligned_cols=113  Identities=14%  Similarity=0.219  Sum_probs=84.0

Q ss_pred             cceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecc-cCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCCceE---
Q psy10867         38 SPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRL-ICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGRLL---  112 (343)
Q Consensus        38 ~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~---  112 (343)
                      .|.=-+++..+.+++.|...|.+.+|+-..++...... +..+.+.....+++..++|+ +..|.|.++-++.+.+.   
T Consensus        35 ~v~lTc~dst~~~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p~~~~  114 (726)
T KOG3621|consen   35 RVKLTCVDATEEYLAMGSSAGSVYLYNRHTGEMRKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELPRDLD  114 (726)
T ss_pred             eEEEEEeecCCceEEEecccceEEEEecCchhhhcccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccCCCcce
Confidence            44444556677888888888999999988877664333 33445556667887777776 56788999988764321   


Q ss_pred             E--Ee-cccCCCeEEEEEecCCCEEEEecCCCeEEEeecCc
Q psy10867        113 A--TA-SSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSR  150 (343)
Q Consensus       113 ~--~~-~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~  150 (343)
                      .  .+ +.|...|++++|++++..+++|...|+|..-.+..
T Consensus       115 ~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s  155 (726)
T KOG3621|consen  115 YVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDS  155 (726)
T ss_pred             eeccccccCCceEEEEEecccccEEeecCCCceEEEEEech
Confidence            1  11 23778999999999999999999999999988877

>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit

Probab=98.47  E-value=0.00017  Score=59.22  Aligned_cols=200  Identities=14%  Similarity=0.109  Sum_probs=116.4

Q ss_pred             CeEEEEEccCCceEEEeccc-CCCeEEEEEec---C----CCEEEEecC----------CCeEEEeecCcc-ceeeeeec
Q psy10867         99 TKLHMWQISSGRLLATASSH-YQPITIVKWSA---D----SNFIVTGGE----------DGTICVWQLSRL-ICKQTVAF  159 (343)
Q Consensus        99 ~~i~v~~~~~~~~~~~~~~~-~~~v~~~~~~~---~----~~~l~s~~~----------dg~i~iwd~~~~-~~~~~~~~  159 (343)
                      ..|++.|..+.+.+..+.-. ...+.+++...   +    ..+|+.|+.          .|.|.++++... .....+. 
T Consensus         2 s~i~l~d~~~~~~~~~~~l~~~E~~~s~~~~~l~~~~~~~~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~-   80 (321)
T PF03178_consen    2 SSIRLVDPTTFEVLDSFELEPNEHVTSLCSVKLKGDSTGKKEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLK-   80 (321)
T ss_dssp             -EEEEEETTTSSEEEEEEEETTEEEEEEEEEEETTS---SSEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEE-
T ss_pred             cEEEEEeCCCCeEEEEEECCCCceEEEEEEEEEcCccccccCEEEEEecccccccccccCcEEEEEEEEcccccceEEE-
Confidence            46888888887776655422 23345444322   2    457777643          288999999884 1111111 


Q ss_pred             CCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCc-eEEEeec--CCcEEEEEEcC
Q psy10867        160 GIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGE-DLLSLIL--DTRLTCVAFDG  236 (343)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~-~~~~~~~--~~~i~~~~~~~  236 (343)
                                     .+. .....++|++++-. .+  . ++.+ ..+.|.+|++...+ ....-..  ...+.++... 
T Consensus        81 ---------------~i~-~~~~~g~V~ai~~~-~~--~-lv~~-~g~~l~v~~l~~~~~l~~~~~~~~~~~i~sl~~~-  138 (321)
T PF03178_consen   81 ---------------LIH-STEVKGPVTAICSF-NG--R-LVVA-VGNKLYVYDLDNSKTLLKKAFYDSPFYITSLSVF-  138 (321)
T ss_dssp             ---------------EEE-EEEESS-EEEEEEE-TT--E-EEEE-ETTEEEEEEEETTSSEEEEEEE-BSSSEEEEEEE-
T ss_pred             ---------------EEE-EEeecCcceEhhhh-CC--E-EEEe-ecCEEEEEEccCcccchhhheecceEEEEEEecc-
Confidence                           222 22356889988877 33  4 3333 35899999998887 4444444  3355555555 


Q ss_pred             CCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEeccc------
Q psy10867        237 TEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTIS------  310 (343)
Q Consensus       237 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~------  310 (343)
                       ++++++|.....+.++..+........       +. -......++++.+-++++.++.+..+|.+.++....      
T Consensus       139 -~~~I~vgD~~~sv~~~~~~~~~~~l~~-------va-~d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~~~~~~~~  209 (321)
T PF03178_consen  139 -KNYILVGDAMKSVSLLRYDEENNKLIL-------VA-RDYQPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYNPEIPNSR  209 (321)
T ss_dssp             -TTEEEEEESSSSEEEEEEETTTE-EEE-------EE-EESS-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-SS-SSTT
T ss_pred             -ccEEEEEEcccCEEEEEEEccCCEEEE-------EE-ecCCCccEEEEEEecCCcEEEEEcCCCeEEEEEECCCCcccc
Confidence             669999999999998877652211100       11 111245688888886767999999999999998752      


Q ss_pred             -ce----eeeecccCCceEEE---EEcc
Q psy10867        311 -RQ----CLRTIQHKGPVLGA---FLGL  330 (343)
Q Consensus       311 -~~----~~~~~~~~~~v~~~---~~sp  330 (343)
                       +.    ....+.....|+++   .+.|
T Consensus       210 ~~~~~L~~~~~f~lg~~v~~~~~~~l~~  237 (321)
T PF03178_consen  210 DGDPKLERISSFHLGDIVNSFRRGSLIP  237 (321)
T ss_dssp             TTTTBEEEEEEEE-SS-EEEEEE--SS-
T ss_pred             cccccceeEEEEECCCccceEEEEEeee
Confidence             12    22333356677777   5555

CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....

>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals

Probab=98.45  E-value=2.5e-05  Score=64.96  Aligned_cols=133  Identities=18%  Similarity=0.230  Sum_probs=85.0

Q ss_pred             CeEEEEEecCCCEEEEecCCCeEEEeecCccceee-ee-ecCCC---------CCCC----------Cccccccceeeee
Q psy10867        121 PITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQ-TV-AFGIP---------GSSG----------KGVTGLTEPLHVK  179 (343)
Q Consensus       121 ~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~-~~-~~~~~---------~~~~----------~~~~~~~~~~~~~  179 (343)
                      .|+.+.|.++...|+.|...|.|.+|.....+... .. .....         ...+          ........+...+
T Consensus         3 ~v~~vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~P~~l~   82 (395)
T PF08596_consen    3 SVTHVSFAPETLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFLPLTLL   82 (395)
T ss_dssp             -EEEEEEETTTTEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEEEEEEE
T ss_pred             eEEEEEecCCCceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccCchhhe
Confidence            48899999998999999999999999886654332 00 00000         0000          0111123456666


Q ss_pred             cccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeec---------CCcEEEEEEcC-----CC---CEEE
Q psy10867        180 SQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLIL---------DTRLTCVAFDG-----TE---DNIY  242 (343)
Q Consensus       180 ~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~---------~~~i~~~~~~~-----~~---~~l~  242 (343)
                      ....++|++++.+.-|   +++.|.++|.+.|.|+|....+..-..         ...++++.|..     |+   -.|+
T Consensus        83 ~~~~g~vtal~~S~iG---Fvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~  159 (395)
T PF08596_consen   83 DAKQGPVTALKNSDIG---FVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLL  159 (395)
T ss_dssp             ---S-SEEEEEE-BTS---EEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEEE
T ss_pred             eccCCcEeEEecCCCc---EEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccceEEE
Confidence            6778999999999887   899999999999999988877766332         23577887762     33   4788


Q ss_pred             EEcCCCcEEEEEee
Q psy10867        243 MGTSEGVIKSFCLR  256 (343)
Q Consensus       243 ~~~~d~~i~i~d~~  256 (343)
                      +|+..|.+.+|.+.
T Consensus       160 vGTn~G~v~~fkIl  173 (395)
T PF08596_consen  160 VGTNSGNVLTFKIL  173 (395)
T ss_dssp             EEETTSEEEEEEEE
T ss_pred             EEeCCCCEEEEEEe
Confidence            99999999999875

The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.

>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A

Probab=98.42  E-value=0.00058  Score=55.61  Aligned_cols=278  Identities=13%  Similarity=0.056  Sum_probs=132.2

Q ss_pred             eEEEecCCC--CeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEE
Q psy10867          6 EVAFSYDGS--GAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISS   83 (343)
Q Consensus         6 ~~~~s~~~d--g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~   83 (343)
                      .++|.++.+  ..+.+-|+.+++..+-..+... ......++|+++.+.--.+...++-.|+++.+...+......-+-.
T Consensus        49 kllF~s~~dg~~nly~lDL~t~~i~QLTdg~g~-~~~g~~~s~~~~~~~Yv~~~~~l~~vdL~T~e~~~vy~~p~~~~g~  127 (386)
T PF14583_consen   49 KLLFASDFDGNRNLYLLDLATGEITQLTDGPGD-NTFGGFLSPDDRALYYVKNGRSLRRVDLDTLEERVVYEVPDDWKGY  127 (386)
T ss_dssp             EEEEEE-TTSS-EEEEEETTT-EEEE---SS-B--TTT-EE-TTSSEEEEEETTTEEEEEETTT--EEEEEE--TTEEEE
T ss_pred             EEEEEeccCCCcceEEEEcccCEEEECccCCCC-CccceEEecCCCeEEEEECCCeEEEEECCcCcEEEEEECCcccccc
Confidence            567766654  4667778888887776655433 3445677787766654434368888999998876555555555544


Q ss_pred             EEE--CCCCCEEEEe----cC-------------------CeEEEEEccCCceEEEecccCCCeEEEEEecC-CCEEEEe
Q psy10867         84 MQA--SPDAAYIAVS----IE-------------------TKLHMWQISSGRLLATASSHYQPITIVKWSAD-SNFIVTG  137 (343)
Q Consensus        84 ~~~--s~~~~~l~~~----~d-------------------~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~s~  137 (343)
                      ..|  +.|+..++..    .+                   ..|.-.|+.+|+....+. ....+..+.|+|. ...|+-|
T Consensus       128 gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~idl~tG~~~~v~~-~~~wlgH~~fsP~dp~li~fC  206 (386)
T PF14583_consen  128 GTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEARPHCRIFTIDLKTGERKVVFE-DTDWLGHVQFSPTDPTLIMFC  206 (386)
T ss_dssp             EEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC---EEEEEEETTT--EEEEEE-ESS-EEEEEEETTEEEEEEEE
T ss_pred             cceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhCCCceEEEEECCCCceeEEEe-cCccccCcccCCCCCCEEEEe
Confidence            555  4467777642    11                   126667888887655554 4556788999994 4455554


Q ss_pred             cC---CCe-EEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEE----eeCCCeE
Q psy10867        138 GE---DGT-ICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVAS----VSHDRTC  209 (343)
Q Consensus       138 ~~---dg~-i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~----~~~d~~i  209 (343)
                      -+   +.. -+||-+++.....                  .++... .....+..=-|.|+|. .+..-    ++.+..|
T Consensus       207 HEGpw~~Vd~RiW~i~~dg~~~------------------~~v~~~-~~~e~~gHEfw~~DG~-~i~y~~~~~~~~~~~i  266 (386)
T PF14583_consen  207 HEGPWDLVDQRIWTINTDGSNV------------------KKVHRR-MEGESVGHEFWVPDGS-TIWYDSYTPGGQDFWI  266 (386)
T ss_dssp             E-S-TTTSS-SEEEEETTS---------------------EESS----TTEEEEEEEE-TTSS--EEEEEEETTT--EEE
T ss_pred             ccCCcceeceEEEEEEcCCCcc------------------eeeecC-CCCcccccccccCCCC-EEEEEeecCCCCceEE
Confidence            33   321 3667665431110                  011111 1223445556888884 22222    2335567


Q ss_pred             EEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcCCC----------------cEEEEEeecccccccccccCCCCCC
Q psy10867        210 KIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEG----------------VIKSFCLRQVPRTRDHHIQDSTSNP  273 (343)
Q Consensus       210 ~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~----------------~i~i~d~~~~~~~~~~~~~~~~~~~  273 (343)
                      .-+|+.+++.......+ ....+-.+++|++++-=+.|.                -|+++++..........  ......
T Consensus       267 ~~~d~~t~~~~~~~~~p-~~~H~~ss~Dg~L~vGDG~d~p~~v~~~~~~~~~~~p~i~~~~~~~~~~~~l~~--h~~sw~  343 (386)
T PF14583_consen  267 AGYDPDTGERRRLMEMP-WCSHFMSSPDGKLFVGDGGDAPVDVADAGGYKIENDPWIYLFDVEAGRFRKLAR--HDTSWK  343 (386)
T ss_dssp             EEE-TTT--EEEEEEE--SEEEEEE-TTSSEEEEEE-------------------EEEEEETTTTEEEEEEE--------
T ss_pred             EeeCCCCCCceEEEeCC-ceeeeEEcCCCCEEEecCCCCCccccccccceecCCcEEEEeccccCceeeeee--ccCcce
Confidence            78888888765433333 455677788888877633332                34556554432211000  000011


Q ss_pred             ccccccC-cEEEEEEccCCCEEE-EEeCCCcEEEEec
Q psy10867        274 DFIGHEK-QVTSLSCSITGITLL-SSSADETLKIWHT  308 (343)
Q Consensus       274 ~~~~~~~-~v~~~~~s~~~~~l~-s~~~dg~i~iwd~  308 (343)
                      .+.++.. .=-...|+||+++++ ++...|...||-+
T Consensus       344 v~~~~~q~~hPhp~FSPDgk~VlF~Sd~~G~~~vY~v  380 (386)
T PF14583_consen  344 VLDGDRQVTHPHPSFSPDGKWVLFRSDMEGPPAVYLV  380 (386)
T ss_dssp             -BTTBSSTT----EE-TTSSEEEEEE-TTSS-EEEEE
T ss_pred             eecCCCccCCCCCccCCCCCEEEEECCCCCCccEEEE
Confidence            1222221 124578999999765 6666787777754

>KOG3617|consensus

Probab=98.36  E-value=2.9e-06  Score=73.91  Aligned_cols=110  Identities=15%  Similarity=0.236  Sum_probs=85.3

Q ss_pred             ceEEEEeCCceEEEEEc----CCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEEecC-CeEEEEEccCCceEE
Q psy10867         39 PHSMCLLGNDYVLGVEK----GKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIE-TKLHMWQISSGRLLA  113 (343)
Q Consensus        39 v~~~~~~~~~~~~~~~~----~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~d-~~i~v~~~~~~~~~~  113 (343)
                      .+-..|+|...++++++    ..|.|.|| .++|++.+.. .-+-.+++++|+|..-.|+.++. |.+.+|...+.+.-.
T Consensus        18 sti~SWHPsePlfAVA~fS~er~GSVtIf-adtGEPqr~V-t~P~hatSLCWHpe~~vLa~gwe~g~~~v~~~~~~e~ht   95 (1416)
T KOG3617|consen   18 STISSWHPSEPLFAVASFSPERGGSVTIF-ADTGEPQRDV-TYPVHATSLCWHPEEFVLAQGWEMGVSDVQKTNTTETHT   95 (1416)
T ss_pred             ccccccCCCCceeEEEEecCCCCceEEEE-ecCCCCCccc-ccceehhhhccChHHHHHhhccccceeEEEecCCceeee
Confidence            34557888887777664    23788888 3556644222 22344677999999988888764 799999987777666


Q ss_pred             EecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCc
Q psy10867        114 TASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSR  150 (343)
Q Consensus       114 ~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~  150 (343)
                      ....|..+|..+.|+|+|..++++..-|.+.+|....
T Consensus        96 v~~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d~  132 (1416)
T KOG3617|consen   96 VVETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYDV  132 (1416)
T ss_pred             eccCCCCCceeEEecCCCCeEEEcCCCceeEEEEeee
Confidence            6678999999999999999999999999999998874

>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region

Probab=98.34  E-value=0.00016  Score=47.44  Aligned_cols=100  Identities=21%  Similarity=0.255  Sum_probs=71.4

Q ss_pred             eEEEEEec---CC-CEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCc
Q psy10867        122 ITIVKWSA---DS-NFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAK  197 (343)
Q Consensus       122 v~~~~~~~---~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  197 (343)
                      |++|++..   +| +.|+.|+.|..|++|+-..                        .+.... ....|.+++-...+  
T Consensus         2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~e------------------------~~~Ei~-e~~~v~~L~~~~~~--   54 (111)
T PF14783_consen    2 VTALCLFDFDGDGENELLVGSDDFEIRVFKGDE------------------------IVAEIT-ETDKVTSLCSLGGG--   54 (111)
T ss_pred             eeEEEEEecCCCCcceEEEecCCcEEEEEeCCc------------------------EEEEEe-cccceEEEEEcCCC--
Confidence            66777765   22 5899999999999998765                        222222 44567777777664  


Q ss_pred             eEEEEeeCCCeEEEEecCCCceEEEeecCCcEEEEEEcC-CC---CEEEEEcCCCcEE
Q psy10867        198 SRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDG-TE---DNIYMGTSEGVIK  251 (343)
Q Consensus       198 ~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~-~~---~~l~~~~~d~~i~  251 (343)
                       .++.+..+|+|-+|+-  .+.++..+....+.++++.. ++   ..|++|-.+|.|-
T Consensus        55 -~F~Y~l~NGTVGvY~~--~~RlWRiKSK~~~~~~~~~D~~gdG~~eLI~GwsnGkve  109 (111)
T PF14783_consen   55 -RFAYALANGTVGVYDR--SQRLWRIKSKNQVTSMAFYDINGDGVPELIVGWSNGKVE  109 (111)
T ss_pred             -EEEEEecCCEEEEEeC--cceeeeeccCCCeEEEEEEcCCCCCceEEEEEecCCeEE
Confidence             6999999999999974  45566666666677766544 32   3788898888774

>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family

Probab=98.33  E-value=0.0016  Score=56.93  Aligned_cols=255  Identities=13%  Similarity=0.069  Sum_probs=139.2

Q ss_pred             EEEecCCCCeEEEEecCCceEEEEEecCCC---CcceE-EEEeCCceEEEEEc-----CCCeEEEEeCCCcccceecccC
Q psy10867          7 VAFSYDGSGAISVWEPKGGTLLMSYKGASV---LSPHS-MCLLGNDYVLGVEK-----GKPMIQAWPVNSQEKAQLRLIC   77 (343)
Q Consensus         7 ~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~---~~v~~-~~~~~~~~~~~~~~-----~~~~i~iw~~~~~~~~~~~~~~   77 (343)
                      .+|.++.++.|.-.|..+|+.+........   ..+.+ ..+ -++.+++...     .+|.|.-+|.++++.+-....-
T Consensus       122 ~v~v~t~dg~l~ALDa~TGk~~W~~~~~~~~~~~~~tssP~v-~~g~Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~~~~  200 (527)
T TIGR03075       122 KVFFGTLDARLVALDAKTGKVVWSKKNGDYKAGYTITAAPLV-VKGKVITGISGGEFGVRGYVTAYDAKTGKLVWRRYTV  200 (527)
T ss_pred             EEEEEcCCCEEEEEECCCCCEEeecccccccccccccCCcEE-ECCEEEEeecccccCCCcEEEEEECCCCceeEeccCc
Confidence            456677789999999999999887654221   01111 111 1556665543     2478999999998876322210


Q ss_pred             -Cc------------------------------ceE-EEEECCCCCEEEE--ec----CC-----------eEEEEEccC
Q psy10867         78 -PG------------------------------RIS-SMQASPDAAYIAV--SI----ET-----------KLHMWQISS  108 (343)
Q Consensus        78 -~~------------------------------~v~-~~~~s~~~~~l~~--~~----d~-----------~i~v~~~~~  108 (343)
                       ..                              .+. .+++.|+..++..  +.    ++           .|.-.|+++
T Consensus       201 p~~~~~~~~~~~~~~~~~~~~tw~~~~~~~gg~~~W~~~s~D~~~~lvy~~tGnp~p~~~~~r~gdnl~~~s~vAld~~T  280 (527)
T TIGR03075       201 PGDMGYLDKADKPVGGEPGAKTWPGDAWKTGGGATWGTGSYDPETNLIYFGTGNPSPWNSHLRPGDNLYTSSIVARDPDT  280 (527)
T ss_pred             CCCcccccccccccccccccCCCCCCccccCCCCccCceeEcCCCCeEEEeCCCCCCCCCCCCCCCCccceeEEEEcccc
Confidence             00                              111 2345554444443  22    22           677889999


Q ss_pred             CceEEEecccCCCeE---------EEEEecCCC---EEEEecCCCeEEEeecCccceeeeeecCC--CC------CCCCc
Q psy10867        109 GRLLATASSHYQPIT---------IVKWSADSN---FIVTGGEDGTICVWQLSRLICKQTVAFGI--PG------SSGKG  168 (343)
Q Consensus       109 ~~~~~~~~~~~~~v~---------~~~~~~~~~---~l~s~~~dg~i~iwd~~~~~~~~~~~~~~--~~------~~~~~  168 (343)
                      |+..-.++.....+.         -+....+++   .++.+..+|.+.+.|-.+++.+.......  .-      ..+..
T Consensus       281 G~~~W~~Q~~~~D~wD~d~~~~p~l~d~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~i~~~~~~~~~~w~~~~~~~~g~p  360 (527)
T TIGR03075       281 GKIKWHYQTTPHDEWDYDGVNEMILFDLKKDGKPRKLLAHADRNGFFYVLDRTNGKLLSAEPFVDTVNWATGVDLKTGRP  360 (527)
T ss_pred             CCEEEeeeCCCCCCccccCCCCcEEEEeccCCcEEEEEEEeCCCceEEEEECCCCceeccccccCCcccccccCCCCCCC
Confidence            998877764222221         122223665   77899999999999999987753221110  00      00000


Q ss_pred             ccc---------ccceeeeecccccce--EEEEeecCCCceEEEEee---------------------------------
Q psy10867        169 VTG---------LTEPLHVKSQHSLPV--THVTLSKLGAKSRVASVS---------------------------------  204 (343)
Q Consensus       169 ~~~---------~~~~~~~~~~~~~~v--~~~~~~~~~~~~~l~~~~---------------------------------  204 (343)
                      ...         ..+....+.+..+.+  ..++++|..  .+++...                                 
T Consensus       361 ~~~~~~~~~~~~~~~~~~~~Pg~~Gg~~W~~~A~Dp~~--g~~yvp~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~~  438 (527)
T TIGR03075       361 IEVPEARSADGKKGKPVGVCPGFLGGKNWQPMAYSPKT--GLFYVPANEVCMDYEPEKVSYKKGAAYLGAGLTIKPPPDD  438 (527)
T ss_pred             ccChhhCcCCCCCCCeeEECCCCcCCCCCCCceECCCC--CEEEEecccccccccccccccCCCCceeccccccCCCCCC
Confidence            000         000000111111111  113333332  1221111                                 


Q ss_pred             CCCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccc
Q psy10867        205 HDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDH  264 (343)
Q Consensus       205 ~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~  264 (343)
                      .-|.|.-+|+.+++.+.......+...-...-.+..++.++.+|.++.+|.++++...+.
T Consensus       439 ~~g~l~AiD~~tGk~~W~~~~~~p~~~~~l~t~g~lvf~g~~~G~l~a~D~~TGe~lw~~  498 (527)
T TIGR03075       439 HMGSLIAWDPITGKIVWEHKEDFPLWGGVLATAGDLVFYGTLEGYFKAFDAKTGEELWKF  498 (527)
T ss_pred             CceeEEEEeCCCCceeeEecCCCCCCCcceEECCcEEEEECCCCeEEEEECCCCCEeEEE
Confidence            135688899999999888775443221112224567888888999999999998776544

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.

>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals

Probab=98.30  E-value=0.0006  Score=56.93  Aligned_cols=245  Identities=11%  Similarity=0.138  Sum_probs=123.9

Q ss_pred             cceEEEEeCCceEEEEEcCCCeEEEEeCCCcccc-------------------------------------------eec
Q psy10867         38 SPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKA-------------------------------------------QLR   74 (343)
Q Consensus        38 ~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~-------------------------------------------~~~   74 (343)
                      .|+.+.|.++..-++++...|.|-||.....+..                                           ..+
T Consensus         3 ~v~~vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~P~~l~   82 (395)
T PF08596_consen    3 SVTHVSFAPETLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFLPLTLL   82 (395)
T ss_dssp             -EEEEEEETTTTEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEEEEEEE
T ss_pred             eEEEEEecCCCceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccCchhhe
Confidence            5778888887655555555588888754322110                                           011


Q ss_pred             ccCCcceEEEEECCCCCEEEEe-cCCeEEEEEccCCceEEEe--cc------cCCCeEEEEEec-----CC---CEEEEe
Q psy10867         75 LICPGRISSMQASPDAAYIAVS-IETKLHMWQISSGRLLATA--SS------HYQPITIVKWSA-----DS---NFIVTG  137 (343)
Q Consensus        75 ~~~~~~v~~~~~s~~~~~l~~~-~d~~i~v~~~~~~~~~~~~--~~------~~~~v~~~~~~~-----~~---~~l~s~  137 (343)
                      ....++|++++.| |=-++|.+ .+|.+.|.|++....+..-  ..      ....++++.|.-     |+   -.+++|
T Consensus        83 ~~~~g~vtal~~S-~iGFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~vG  161 (395)
T PF08596_consen   83 DAKQGPVTALKNS-DIGFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLLVG  161 (395)
T ss_dssp             ---S-SEEEEEE--BTSEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEEEEE
T ss_pred             eccCCcEeEEecC-CCcEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccceEEEEE
Confidence            1235789999987 44466664 6899999999877666542  22      234688888863     33   378899


Q ss_pred             cCCCeEEEeecCc-cceeeeeecCCCCCCCCccccccceeeeecccccceEEEEee-cCC-C-----------------c
Q psy10867        138 GEDGTICVWQLSR-LICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLS-KLG-A-----------------K  197 (343)
Q Consensus       138 ~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~-~-----------------~  197 (343)
                      ...|.+.+|.+.- ........                .......+..+|..+..- .+. .                 -
T Consensus       162 Tn~G~v~~fkIlp~~~g~f~v~----------------~~~~~~~~~~~i~~I~~i~~~~G~~a~At~~~~~~l~~g~~i  225 (395)
T PF08596_consen  162 TNSGNVLTFKILPSSNGRFSVQ----------------FAGATTNHDSPILSIIPINADTGESALATISAMQGLSKGISI  225 (395)
T ss_dssp             ETTSEEEEEEEEE-GGG-EEEE----------------EEEEE--SS----EEEEEETTT--B-B-BHHHHHGGGGT---
T ss_pred             eCCCCEEEEEEecCCCCceEEE----------------EeeccccCCCceEEEEEEECCCCCcccCchhHhhccccCCCc
Confidence            9999999998852 11111111                122222344555544422 111 0                 0


Q ss_pred             eEEEEeeCCCeEEEEecCCCceEEEeecC-CcEEEEEEc-----CCCCEEEEEcCCCcEEEEEeecccccccccccCCCC
Q psy10867        198 SRVASVSHDRTCKIFDLCTGEDLLSLILD-TRLTCVAFD-----GTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTS  271 (343)
Q Consensus       198 ~~l~~~~~d~~i~~wd~~~~~~~~~~~~~-~~i~~~~~~-----~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~  271 (343)
                      .-++....+..++++...+.+...+.... .....+++-     ..+..|++-..+|.+++|.+...+......+.    
T Consensus       226 ~g~vVvvSe~~irv~~~~~~k~~~K~~~~~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP~Lkei~~~~l~----  301 (395)
T PF08596_consen  226 PGYVVVVSESDIRVFKPPKSKGAHKSFDDPFLCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLPSLKEIKSVSLP----  301 (395)
T ss_dssp             -EEEEEE-SSEEEEE-TT---EEEEE-SS-EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT--EEEEEE-S----
T ss_pred             CcEEEEEcccceEEEeCCCCcccceeeccccccceEEEEeecccCCceEEEEEECCCcEEEEECCCchHhhcccCC----
Confidence            12344445778999998887776555422 223344452     35667888889999999998876554433211    


Q ss_pred             CCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEe
Q psy10867        272 NPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWH  307 (343)
Q Consensus       272 ~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd  307 (343)
                         .......+....++++|..++-.+.. .+.++.
T Consensus       302 ---~~~d~~~~~~ssis~~Gdi~~~~gps-E~~l~s  333 (395)
T PF08596_consen  302 ---PPLDSRRLSSSSISRNGDIFYWTGPS-EIQLFS  333 (395)
T ss_dssp             ---S---HHHHTT-EE-TTS-EEEE-SSS-EEEEEE
T ss_pred             ---CccccccccccEECCCCCEEEEeCcc-cEEEEE
Confidence               01112233456678888866655433 344433

The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.

>KOG3621|consensus

Probab=98.29  E-value=1.2e-05  Score=68.56  Aligned_cols=141  Identities=17%  Similarity=0.103  Sum_probs=97.9

Q ss_pred             cccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee--cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeeccc
Q psy10867        182 HSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI--LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVP  259 (343)
Q Consensus       182 ~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~  259 (343)
                      +...+.--+++..+  ++++.|+.-|.+++|+-..++....-.  ....+..++.+++..++|+|+..|.|.++-+....
T Consensus        32 ~~~~v~lTc~dst~--~~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~  109 (726)
T KOG3621|consen   32 FPARVKLTCVDATE--EYLAMGSSAGSVYLYNRHTGEMRKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKEL  109 (726)
T ss_pred             CcceEEEEEeecCC--ceEEEecccceEEEEecCchhhhcccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccC
Confidence            44455555666666  799999999999999966655443322  34457778889999999999999999999888733


Q ss_pred             ccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccc-e---eeeec-ccCCceEEEEEc
Q psy10867        260 RTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISR-Q---CLRTI-QHKGPVLGAFLG  329 (343)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~-~---~~~~~-~~~~~v~~~~~s  329 (343)
                      .......     ...-..|...|++++|++++..+++|...|.|..-.+.+. .   ..+.+ ...+.|-.+...
T Consensus       110 p~~~~~~-----t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s~~~~~~~~q~il~~ds~IVQlD~~  179 (726)
T KOG3621|consen  110 PRDLDYV-----TPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDSRQAFLSKSQEILSEDSEIVQLDYL  179 (726)
T ss_pred             CCcceee-----ccccccCCceEEEEEecccccEEeecCCCceEEEEEechhhhhccccceeeccCcceEEeecc
Confidence            2221111     0111237889999999999999999999999998887762 1   11111 245666655554

>COG3391 Uncharacterized conserved protein [Function unknown]

Probab=98.29  E-value=0.0016  Score=54.65  Aligned_cols=248  Identities=12%  Similarity=0.083  Sum_probs=151.9

Q ss_pred             EEEEeCCCcccceecccCCcceEEEEECCCCCEEEE--ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCE-EEE
Q psy10867         60 IQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV--SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNF-IVT  136 (343)
Q Consensus        60 i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~--~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~s  136 (343)
                      +.+++..+.........+. ....+...+++..+..  .....+...+............-...-..++.++.++. .+.
T Consensus        13 ~~v~~~~~~~~~~~~~~~~-~~~~v~~~~~g~~~~v~~~~~~~~~~~~~~~n~~~~~~~~g~~~p~~i~v~~~~~~vyv~   91 (381)
T COG3391          13 VSVINTGTNKVTAAISLGR-GPGGVAVNPDGTQVYVANSGSNDVSVIDATSNTVTQSLSVGGVYPAGVAVNPAGNKVYVT   91 (381)
T ss_pred             eEEEeecccEEEEEeecCC-CCceeEEcCccCEEEEEeecCceeeecccccceeeeeccCCCccccceeeCCCCCeEEEe
Confidence            4455544444332222222 4566778888854443  22335555554422211211111133456788887774 444


Q ss_pred             ecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEee--CCCeEEEEec
Q psy10867        137 GGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVS--HDRTCKIFDL  214 (343)
Q Consensus       137 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~--~d~~i~~wd~  214 (343)
                      ...++.|.+.|..+........                       -......++++|++. ...++-.  .++++.+.|.
T Consensus        92 ~~~~~~v~vid~~~~~~~~~~~-----------------------vG~~P~~~~~~~~~~-~vYV~n~~~~~~~vsvid~  147 (381)
T COG3391          92 TGDSNTVSVIDTATNTVLGSIP-----------------------VGLGPVGLAVDPDGK-YVYVANAGNGNNTVSVIDA  147 (381)
T ss_pred             cCCCCeEEEEcCcccceeeEee-----------------------eccCCceEEECCCCC-EEEEEecccCCceEEEEeC
Confidence            5556899999977765444332                       112566899999984 3333333  3799999999


Q ss_pred             CCCceEEEeecCCcEEEEEEcCCCCEEEEEc-CCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCE
Q psy10867        215 CTGEDLLSLILDTRLTCVAFDGTEDNIYMGT-SEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGIT  293 (343)
Q Consensus       215 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~  293 (343)
                      .+.+.............++++|+|+.+++.. .++.|.++|.......+ ..      ......-......+.++|+|++
T Consensus       148 ~t~~~~~~~~vG~~P~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~~-~~------~~~~~~~~~~P~~i~v~~~g~~  220 (381)
T COG3391         148 ATNKVTATIPVGNTPTGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVVR-GS------VGSLVGVGTGPAGIAVDPDGNR  220 (381)
T ss_pred             CCCeEEEEEecCCCcceEEECCCCCeEEEEecCCCeEEEEeCCCcceec-cc------cccccccCCCCceEEECCCCCE
Confidence            9998888865443348999999999777765 78899999966543321 00      0001112234467899999996


Q ss_pred             EEEEeCC---CcEEEEecccceeeeec-ccCC-ceEEEEEccCCCeeeecc
Q psy10867        294 LLSSSAD---ETLKIWHTISRQCLRTI-QHKG-PVLGAFLGLLPPAIHDYD  339 (343)
Q Consensus       294 l~s~~~d---g~i~iwd~~~~~~~~~~-~~~~-~v~~~~~sp~~~~l~~~~  339 (343)
                      +......   +.+...|..++.....- .... ....+..+|+|..+.+..
T Consensus       221 ~yV~~~~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~v~~~p~g~~~yv~~  271 (381)
T COG3391         221 VYVANDGSGSNNVLKIDTATGNVTATDLPVGSGAPRGVAVDPAGKAAYVAN  271 (381)
T ss_pred             EEEEeccCCCceEEEEeCCCceEEEeccccccCCCCceeECCCCCEEEEEe
Confidence            6654433   58999999888777662 2222 567889999999988763

>KOG4640|consensus

Probab=98.28  E-value=5e-06  Score=69.99  Aligned_cols=94  Identities=17%  Similarity=0.098  Sum_probs=78.3

Q ss_pred             cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEE-EEEEccCCCEEEEEeCCCcE
Q psy10867        225 LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVT-SLSCSITGITLLSSSADETL  303 (343)
Q Consensus       225 ~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~s~~~~~l~s~~~dg~i  303 (343)
                      .+..+..+.|+|.-..+|.+..+|.|.+..+. ..+           +.+++-|...++ +++|.|||+.||.|-.||+|
T Consensus        19 l~~~i~~~ewnP~~dLiA~~t~~gelli~R~n-~qR-----------lwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I   86 (665)
T KOG4640|consen   19 LPINIKRIEWNPKMDLIATRTEKGELLIHRLN-WQR-----------LWTIPIPGENVTASLCWRPDGKLLAVGFKDGTI   86 (665)
T ss_pred             cccceEEEEEcCccchhheeccCCcEEEEEec-cce-----------eEeccCCCCccceeeeecCCCCEEEEEecCCeE
Confidence            45668889999999999999999999999887 444           334554566666 99999999999999999999


Q ss_pred             EEEecccceeeee--cccCCceEEEEEcc
Q psy10867        304 KIWHTISRQCLRT--IQHKGPVLGAFLGL  330 (343)
Q Consensus       304 ~iwd~~~~~~~~~--~~~~~~v~~~~~sp  330 (343)
                      ++-|++++..+..  +.....|.++.|+|
T Consensus        87 ~L~Dve~~~~l~~~~~s~e~~is~~~w~~  115 (665)
T KOG4640|consen   87 RLHDVEKGGRLVSFLFSVETDISKGIWDR  115 (665)
T ss_pred             EEEEccCCCceeccccccccchheeeccc
Confidence            9999999998888  44677888888863

>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region

Probab=98.21  E-value=0.00041  Score=45.50  Aligned_cols=101  Identities=20%  Similarity=0.227  Sum_probs=70.8

Q ss_pred             eEEEEeec---CCCceEEEEeeCCCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccc
Q psy10867        186 VTHVTLSK---LGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTR  262 (343)
Q Consensus       186 v~~~~~~~---~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~  262 (343)
                      |+++++..   +|. +.|+.|+.|..||+|+  ..+.+.++.....+++++-... ..++.+..+|+|-+|+-..  +  
T Consensus         2 V~al~~~d~d~dg~-~eLlvGs~D~~IRvf~--~~e~~~Ei~e~~~v~~L~~~~~-~~F~Y~l~NGTVGvY~~~~--R--   73 (111)
T PF14783_consen    2 VTALCLFDFDGDGE-NELLVGSDDFEIRVFK--GDEIVAEITETDKVTSLCSLGG-GRFAYALANGTVGVYDRSQ--R--   73 (111)
T ss_pred             eeEEEEEecCCCCc-ceEEEecCCcEEEEEe--CCcEEEEEecccceEEEEEcCC-CEEEEEecCCEEEEEeCcc--e--
Confidence            45666554   444 7899999999999997  4577888888899999988876 6688888999999997532  1  


Q ss_pred             cccccCCCCCCccccccCcEEEEEEc-cC--C-CEEEEEeCCCcEE
Q psy10867        263 DHHIQDSTSNPDFIGHEKQVTSLSCS-IT--G-ITLLSSSADETLK  304 (343)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~v~~~~~s-~~--~-~~l~s~~~dg~i~  304 (343)
                               +-..+. +..++++.+. .+  | .-|++|-.+|.|-
T Consensus        74 ---------lWRiKS-K~~~~~~~~~D~~gdG~~eLI~GwsnGkve  109 (111)
T PF14783_consen   74 ---------LWRIKS-KNQVTSMAFYDINGDGVPELIVGWSNGKVE  109 (111)
T ss_pred             ---------eeeecc-CCCeEEEEEEcCCCCCceEEEEEecCCeEE
Confidence                     112222 2335666543 33  2 3688888888764

>PRK13616 lipoprotein LpqB; Provisional

Probab=98.20  E-value=0.00054  Score=60.37  Aligned_cols=185  Identities=16%  Similarity=0.102  Sum_probs=101.0

Q ss_pred             cceEEEEeCCceEEEEEc------CCC--eEEEEeCCCcccceecccCCcceEEEEECCCCCEEEEecCC----------
Q psy10867         38 SPHSMCLLGNDYVLGVEK------GKP--MIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIET----------   99 (343)
Q Consensus        38 ~v~~~~~~~~~~~~~~~~------~~~--~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~d~----------   99 (343)
                      .+.+.+++|+|..++...      .|.  .|.+++.. +.......+  .....-.|+|||..|+...++          
T Consensus       351 ~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~g-g~~~~lt~g--~~~t~PsWspDG~~lw~v~dg~~~~~v~~~~  427 (591)
T PRK13616        351 NITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLG-GVAVQVLEG--HSLTRPSWSLDADAVWVVVDGNTVVRVIRDP  427 (591)
T ss_pred             CcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCC-CcceeeecC--CCCCCceECCCCCceEEEecCcceEEEeccC
Confidence            678899999997766554      233  44444542 222222222  247888999998877653222          


Q ss_pred             ---eEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEE---eecCccceeeeeecCCCCCCCCcccccc
Q psy10867        100 ---KLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICV---WQLSRLICKQTVAFGIPGSSGKGVTGLT  173 (343)
Q Consensus       100 ---~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~i---wd~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (343)
                         .+.+.+++.++...   ...+.|..+.|+|||..++... +|.|.+   -....+.  ..+               .
T Consensus       428 ~~gql~~~~vd~ge~~~---~~~g~Issl~wSpDG~RiA~i~-~g~v~Va~Vvr~~~G~--~~l---------------~  486 (591)
T PRK13616        428 ATGQLARTPVDASAVAS---RVPGPISELQLSRDGVRAAMII-GGKVYLAVVEQTEDGQ--YAL---------------T  486 (591)
T ss_pred             CCceEEEEeccCchhhh---ccCCCcCeEEECCCCCEEEEEE-CCEEEEEEEEeCCCCc--eee---------------c
Confidence               33333444333322   2356799999999999888766 467766   3322322  111               0


Q ss_pred             ceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCC-CceEEEee---cCCcEEEEEEcCCCCEEEEEcCCCc
Q psy10867        174 EPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCT-GEDLLSLI---LDTRLTCVAFDGTEDNIYMGTSEGV  249 (343)
Q Consensus       174 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~-~~~~~~~~---~~~~i~~~~~~~~~~~l~~~~~d~~  249 (343)
                      .+......-...+..+.|.+++  .++ .+..++.-.+|.+.- |.....+.   ...++..++-++  ..+++...++.
T Consensus       487 ~~~~l~~~l~~~~~~l~W~~~~--~L~-V~~~~~~~~v~~v~vDG~~~~~~~~~n~~~~v~~vaa~~--~~iyv~~~~g~  561 (591)
T PRK13616        487 NPREVGPGLGDTAVSLDWRTGD--SLV-VGRSDPEHPVWYVNLDGSNSDALPSRNLSAPVVAVAASP--STVYVTDARAV  561 (591)
T ss_pred             ccEEeecccCCccccceEecCC--EEE-EEecCCCCceEEEecCCccccccCCCCccCceEEEecCC--ceEEEEcCCce
Confidence            1222222333446789999998  544 555544444454331 22211112   245566777665  35666666664


Q ss_pred             EE
Q psy10867        250 IK  251 (343)
Q Consensus       250 i~  251 (343)
                      +.
T Consensus       562 ~~  563 (591)
T PRK13616        562 LQ  563 (591)
T ss_pred             EE
Confidence            43

>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase

Probab=98.18  E-value=0.0021  Score=51.57  Aligned_cols=229  Identities=11%  Similarity=0.103  Sum_probs=126.6

Q ss_pred             CceEEEEEcCCCeEEEEeCC-CcccceecccCCcceEEEEECCCCCEEEEecCCeEEEEEccCCceEEEe----------
Q psy10867         47 NDYVLGVEKGKPMIQAWPVN-SQEKAQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATA----------  115 (343)
Q Consensus        47 ~~~~~~~~~~~~~i~iw~~~-~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~----------  115 (343)
                      .+..++.|.++| +.+++.. .....+.  .+...|..+...|+-+.|++=.|+.+.++++..-......          
T Consensus         6 ~~~~L~vGt~~G-l~~~~~~~~~~~~~i--~~~~~I~ql~vl~~~~~llvLsd~~l~~~~L~~l~~~~~~~~~~~~~~~~   82 (275)
T PF00780_consen    6 WGDRLLVGTEDG-LYVYDLSDPSKPTRI--LKLSSITQLSVLPELNLLLVLSDGQLYVYDLDSLEPVSTSAPLAFPKSRS   82 (275)
T ss_pred             CCCEEEEEECCC-EEEEEecCCccceeE--eecceEEEEEEecccCEEEEEcCCccEEEEchhhcccccccccccccccc
Confidence            455566667767 8999883 2222222  2334499999999888888766799999998765433311          


Q ss_pred             ----cccCCCeEEEE--EecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEE
Q psy10867        116 ----SSHYQPITIVK--WSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHV  189 (343)
Q Consensus       116 ----~~~~~~v~~~~--~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  189 (343)
                          ......+...+  -.+.+...+.......|.+|..........                 ...+.+. -...+..+
T Consensus        83 ~~~~~~~~~~v~~f~~~~~~~~~~~L~va~kk~i~i~~~~~~~~~f~-----------------~~~ke~~-lp~~~~~i  144 (275)
T PF00780_consen   83 LPTKLPETKGVSFFAVNGGHEGSRRLCVAVKKKILIYEWNDPRNSFS-----------------KLLKEIS-LPDPPSSI  144 (275)
T ss_pred             ccccccccCCeeEEeeccccccceEEEEEECCEEEEEEEECCccccc-----------------ceeEEEE-cCCCcEEE
Confidence                11223344444  112333334444446899988876311100                 0122222 34678889


Q ss_pred             EeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecC-------------CcEEEEEEcCCCCEEEEEcCCCcEEEEEee
Q psy10867        190 TLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILD-------------TRLTCVAFDGTEDNIYMGTSEGVIKSFCLR  256 (343)
Q Consensus       190 ~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~-------------~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~  256 (343)
                      +|.+    +.++.|..+ ...+.|+.++.....+...             .++..+... ++.+|++-  +..-.+.|..
T Consensus       145 ~~~~----~~i~v~~~~-~f~~idl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~e~Ll~~--~~~g~fv~~~  216 (275)
T PF00780_consen  145 AFLG----NKICVGTSK-GFYLIDLNTGSPSELLDPSDSSSSFKSRNSSSKPLGIFQLS-DNEFLLCY--DNIGVFVNKN  216 (275)
T ss_pred             EEeC----CEEEEEeCC-ceEEEecCCCCceEEeCccCCcchhhhcccCCCceEEEEeC-CceEEEEe--cceEEEEcCC
Confidence            9984    356666544 4788898877654433211             123333333 34555543  2333333333


Q ss_pred             cccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc
Q psy10867        257 QVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ  318 (343)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~  318 (343)
                      .. ..+         ...+.- ...+.++++.  ..+|+..+.+ .|.||++.+++.++++.
T Consensus       217 G~-~~r---------~~~i~W-~~~p~~~~~~--~pyli~~~~~-~iEV~~~~~~~lvQ~i~  264 (275)
T PF00780_consen  217 GE-PSR---------KSTIQW-SSAPQSVAYS--SPYLIAFSSN-SIEVRSLETGELVQTIP  264 (275)
T ss_pred             CC-cCc---------ccEEEc-CCchhEEEEE--CCEEEEECCC-EEEEEECcCCcEEEEEE
Confidence            21 111         011111 2345556653  3477776665 59999999999988886

These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity

>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases

Probab=98.16  E-value=0.0027  Score=52.19  Aligned_cols=253  Identities=13%  Similarity=0.079  Sum_probs=122.0

Q ss_pred             cceEEEEeCCceEEEEEcCCCeEEEEeCCCcc--cce----ecccCCcceEEEEECCC----CCEEEE-ecC--------
Q psy10867         38 SPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQE--KAQ----LRLICPGRISSMQASPD----AAYIAV-SIE--------   98 (343)
Q Consensus        38 ~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~--~~~----~~~~~~~~v~~~~~s~~----~~~l~~-~~d--------   98 (343)
                      ..++|+|.|||+++++-. .|.|++++.....  .+.    +..........++++|+    +.+.+. ...        
T Consensus         3 ~P~~~a~~pdG~l~v~e~-~G~i~~~~~~g~~~~~v~~~~~v~~~~~~gllgia~~p~f~~n~~lYv~~t~~~~~~~~~~   81 (331)
T PF07995_consen    3 NPRSMAFLPDGRLLVAER-SGRIWVVDKDGSLKTPVADLPEVFADGERGLLGIAFHPDFASNGYLYVYYTNADEDGGDND   81 (331)
T ss_dssp             SEEEEEEETTSCEEEEET-TTEEEEEETTTEECEEEEE-TTTBTSTTBSEEEEEE-TTCCCC-EEEEEEEEE-TSSSSEE
T ss_pred             CceEEEEeCCCcEEEEeC-CceEEEEeCCCcCcceecccccccccccCCcccceeccccCCCCEEEEEEEcccCCCCCcc
Confidence            568999999999998877 4999999933332  111    12234567899999994    443333 321        


Q ss_pred             CeEEEEEccCC-------c-eEEEecc---cCCCeEEEEEecCCCEEEEecCCCe---EEEeecCccceeeeeecCCCCC
Q psy10867         99 TKLHMWQISSG-------R-LLATASS---HYQPITIVKWSADSNFIVTGGEDGT---ICVWQLSRLICKQTVAFGIPGS  164 (343)
Q Consensus        99 ~~i~v~~~~~~-------~-~~~~~~~---~~~~v~~~~~~~~~~~l~s~~~dg~---i~iwd~~~~~~~~~~~~~~~~~  164 (343)
                      ..|.-|....+       + .+..+..   ....-..|.|.||+.+.++.+..+.   ..--+...++..   .+...+.
T Consensus        82 ~~v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~~l~fgpDG~LYvs~G~~~~~~~~~~~~~~~G~il---ri~~dG~  158 (331)
T PF07995_consen   82 NRVVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGGGLAFGPDGKLYVSVGDGGNDDNAQDPNSLRGKIL---RIDPDGS  158 (331)
T ss_dssp             EEEEEEEEETTSCEEEEEEEEEEEEES-CSSSS-EEEEEE-TTSEEEEEEB-TTTGGGGCSTTSSTTEEE---EEETTSS
T ss_pred             eeeEEEeccCCccccccceEEEEEeCCCCCCCCCCccccCCCCCcEEEEeCCCCCcccccccccccceEE---EecccCc
Confidence            24555555443       1 1112222   2234567999999987777665443   000000001111   1110000


Q ss_pred             --CCCccc--cccceeeeecccccceEEEEeecC-CCceEEEE-eeCCCeEEEEecCCCc--------------------
Q psy10867        165 --SGKGVT--GLTEPLHVKSQHSLPVTHVTLSKL-GAKSRVAS-VSHDRTCKIFDLCTGE--------------------  218 (343)
Q Consensus       165 --~~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~l~~-~~~d~~i~~wd~~~~~--------------------  218 (343)
                        ..+...  ........-.++. ....++|+|. +  .++++ -+.++.=.|.-++.+.                    
T Consensus       159 ~p~dnP~~~~~~~~~~i~A~GlR-N~~~~~~d~~tg--~l~~~d~G~~~~dein~i~~G~nYGWP~~~~~~~~~~~~~~~  235 (331)
T PF07995_consen  159 IPADNPFVGDDGADSEIYAYGLR-NPFGLAFDPNTG--RLWAADNGPDGWDEINRIEPGGNYGWPYCEGGPKYSGPPIGD  235 (331)
T ss_dssp             B-TTSTTTTSTTSTTTEEEE--S-EEEEEEEETTTT--EEEEEEE-SSSSEEEEEE-TT-B--TTTBSSSCSTTSS-ECT
T ss_pred             CCCCCccccCCCceEEEEEeCCC-ccccEEEECCCC--cEEEEccCCCCCcEEEEeccCCcCCCCCCcCCCCCCCCcccc
Confidence              000000  0000111112233 3458899998 5  44433 2222222222222111                    


Q ss_pred             ---------eEEEeecCCcEEEEEEcC-------CCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcE
Q psy10867        219 ---------DLLSLILDTRLTCVAFDG-------TEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQV  282 (343)
Q Consensus       219 ---------~~~~~~~~~~i~~~~~~~-------~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v  282 (343)
                               +...+.+...+..+.|.+       .+.++++.-..+.|....+.........       ...+......+
T Consensus       236 ~~~~~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~-------~~~~~~~~~r~  308 (331)
T PF07995_consen  236 APSCPGFVPPVFAYPPHSAPTGIIFYRGSAFPEYRGDLFVADYGGGRIWRLDLDEDGSVTEE-------EEFLGGFGGRP  308 (331)
T ss_dssp             GSS-TTS---SEEETTT--EEEEEEE-SSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEE-------EEECTTSSS-E
T ss_pred             ccCCCCcCccceeecCccccCceEEECCccCccccCcEEEecCCCCEEEEEeeecCCCccce-------EEccccCCCCc
Confidence                     222333445667777764       3456666666778888887643221111       11123344579


Q ss_pred             EEEEEccCCCEEEEEeCCCcEE
Q psy10867        283 TSLSCSITGITLLSSSADETLK  304 (343)
Q Consensus       283 ~~~~~s~~~~~l~s~~~dg~i~  304 (343)
                      ..+++.|||.++++-..+|.|+
T Consensus       309 ~~v~~~pDG~Lyv~~d~~G~iy  330 (331)
T PF07995_consen  309 RDVAQGPDGALYVSDDSDGKIY  330 (331)
T ss_dssp             EEEEEETTSEEEEEE-TTTTEE
T ss_pred             eEEEEcCCCeEEEEECCCCeEe
Confidence            9999999999888888888774

The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....

>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2

Probab=98.12  E-value=0.0022  Score=49.60  Aligned_cols=184  Identities=9%  Similarity=-0.009  Sum_probs=115.5

Q ss_pred             CeEEEEEecCCCEEEEecCCC--eEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCce
Q psy10867        121 PITIVKWSADSNFIVTGGEDG--TICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKS  198 (343)
Q Consensus       121 ~v~~~~~~~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~  198 (343)
                      -...+.|..++.++-+.+.-|  .|+.+|+.+++......++                     ....-..++...+   .
T Consensus        46 FTQGL~~~~~g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~---------------------~~~FgEGit~~~d---~  101 (264)
T PF05096_consen   46 FTQGLEFLDDGTLYESTGLYGQSSLRKVDLETGKVLQSVPLP---------------------PRYFGEGITILGD---K  101 (264)
T ss_dssp             EEEEEEEEETTEEEEEECSTTEEEEEEEETTTSSEEEEEE-T---------------------TT--EEEEEEETT---E
T ss_pred             cCccEEecCCCEEEEeCCCCCcEEEEEEECCCCcEEEEEECC---------------------ccccceeEEEECC---E
Confidence            345788877888888888766  6999999998665443211                     1222334444443   4


Q ss_pred             EEEEeeCCCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccc
Q psy10867        199 RVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGH  278 (343)
Q Consensus       199 ~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~  278 (343)
                      +....-.++...+||..+.+.+.++..+..-+.++  .+++.|+.+.....++++|..+........+..      -...
T Consensus       102 l~qLTWk~~~~f~yd~~tl~~~~~~~y~~EGWGLt--~dg~~Li~SDGS~~L~~~dP~~f~~~~~i~V~~------~g~p  173 (264)
T PF05096_consen  102 LYQLTWKEGTGFVYDPNTLKKIGTFPYPGEGWGLT--SDGKRLIMSDGSSRLYFLDPETFKEVRTIQVTD------NGRP  173 (264)
T ss_dssp             EEEEESSSSEEEEEETTTTEEEEEEE-SSS--EEE--ECSSCEEEE-SSSEEEEE-TTT-SEEEEEE-EE------TTEE
T ss_pred             EEEEEecCCeEEEEccccceEEEEEecCCcceEEE--cCCCEEEEECCccceEEECCcccceEEEEEEEE------CCEE
Confidence            56666778999999999999999998877777777  457788888888899999987766544432110      0111


Q ss_pred             cCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc----------------cCCceEEEEEccCCCeeee
Q psy10867        279 EKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ----------------HKGPVLGAFLGLLPPAIHD  337 (343)
Q Consensus       279 ~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~----------------~~~~v~~~~~sp~~~~l~~  337 (343)
                      -..++-+.|- +|...|=.=....|..-|..+|+.+..+.                ..+-.+.+|+.|..+.|+.
T Consensus       174 v~~LNELE~i-~G~IyANVW~td~I~~Idp~tG~V~~~iDls~L~~~~~~~~~~~~~~dVLNGIAyd~~~~~l~v  247 (264)
T PF05096_consen  174 VSNLNELEYI-NGKIYANVWQTDRIVRIDPETGKVVGWIDLSGLRPEVGRDKSRQPDDDVLNGIAYDPETDRLFV  247 (264)
T ss_dssp             ---EEEEEEE-TTEEEEEETTSSEEEEEETTT-BEEEEEE-HHHHHHHTSTTST--TTS-EEEEEEETTTTEEEE
T ss_pred             CCCcEeEEEE-cCEEEEEeCCCCeEEEEeCCCCeEEEEEEhhHhhhcccccccccccCCeeEeEeEeCCCCEEEE
Confidence            2234556664 56655544455577778888888776542                0234789999887766554

3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.

>KOG2395|consensus

Probab=98.12  E-value=0.00016  Score=60.19  Aligned_cols=132  Identities=8%  Similarity=0.041  Sum_probs=93.4

Q ss_pred             eEEEEeeCCCeEEEEecCCCceEEEeecCCcEEEEEEcCCCC-------EEEEEcCCCcEEEEEeecccccccccccCCC
Q psy10867        198 SRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTED-------NIYMGTSEGVIKSFCLRQVPRTRDHHIQDST  270 (343)
Q Consensus       198 ~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~-------~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~  270 (343)
                      -++.++.....++-.|++.|+.+.++.....|.-+.+.|+.+       .-++|-.+..|.-||.+-.... .       
T Consensus       347 lil~~~~~~~~l~klDIE~GKIVeEWk~~~di~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~-k-------  418 (644)
T KOG2395|consen  347 LILMDGGEQDKLYKLDIERGKIVEEWKFEDDINMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKN-K-------  418 (644)
T ss_pred             eEeeCCCCcCcceeeecccceeeeEeeccCCcceeeccCCcchhcccccccEEeecCCceEEecccccCcc-e-------
Confidence            455567777889999999999999999877788888888754       2456778899999998843221 0       


Q ss_pred             CCCccccc----cCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc-cCCceEEEEEccCCCeeeecc
Q psy10867        271 SNPDFIGH----EKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVLGAFLGLLPPAIHDYD  339 (343)
Q Consensus       271 ~~~~~~~~----~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~  339 (343)
                       +....+|    .....|.+-..+ .++|.||.+|.||+||-...+.-..+. ...+|..+..+.+|++|++.+
T Consensus       419 -l~~~q~kqy~~k~nFsc~aTT~s-G~IvvgS~~GdIRLYdri~~~AKTAlPgLG~~I~hVdvtadGKwil~Tc  490 (644)
T KOG2395|consen  419 -LAVVQSKQYSTKNNFSCFATTES-GYIVVGSLKGDIRLYDRIGRRAKTALPGLGDAIKHVDVTADGKWILATC  490 (644)
T ss_pred             -eeeeeccccccccccceeeecCC-ceEEEeecCCcEEeehhhhhhhhhcccccCCceeeEEeeccCcEEEEec
Confidence             1111222    223444444444 489999999999999973333333344 678999999999999998764

>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=98.08  E-value=0.0051  Score=52.59  Aligned_cols=224  Identities=17%  Similarity=0.160  Sum_probs=114.9

Q ss_pred             ceEEEEECCCCCEEEEe--cCC----eEEEEEccCCceEEEe-cccCCCeEEEEEecCCCEEEEecC-----------CC
Q psy10867         80 RISSMQASPDAAYIAVS--IET----KLHMWQISSGRLLATA-SSHYQPITIVKWSADSNFIVTGGE-----------DG  141 (343)
Q Consensus        80 ~v~~~~~s~~~~~l~~~--~d~----~i~v~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~~~-----------dg  141 (343)
                      .+....++||++++|.+  ..|    .++++|+++|+.+... ...  ....+.|.++++.|+....           ..
T Consensus       125 ~~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~~--~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~  202 (414)
T PF02897_consen  125 SLGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIENP--KFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPR  202 (414)
T ss_dssp             EEEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEEE--ESEEEEECTTSSEEEEEECSTTTSS-CCGCCE
T ss_pred             EeeeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCccccc--ccceEEEeCCCCEEEEEEeCcccccccCCCCc
Confidence            34467899999999953  233    6999999999776532 221  1234999999887766543           23


Q ss_pred             eEEEeecCccceeeeeecCCCCCCCCccccccceeeeeccccc--ceEEEEeecCCCceEEEE-eeC--C-CeEEEEecC
Q psy10867        142 TICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSL--PVTHVTLSKLGAKSRVAS-VSH--D-RTCKIFDLC  215 (343)
Q Consensus       142 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~l~~-~~~--d-~~i~~wd~~  215 (343)
                      .|+.|.+.+.....                    ...+.....  ....+..++++  ++++. ...  + ..+.+.|+.
T Consensus       203 ~v~~~~~gt~~~~d--------------------~lvfe~~~~~~~~~~~~~s~d~--~~l~i~~~~~~~~s~v~~~d~~  260 (414)
T PF02897_consen  203 QVYRHKLGTPQSED--------------------ELVFEEPDEPFWFVSVSRSKDG--RYLFISSSSGTSESEVYLLDLD  260 (414)
T ss_dssp             EEEEEETTS-GGG---------------------EEEEC-TTCTTSEEEEEE-TTS--SEEEEEEESSSSEEEEEEEECC
T ss_pred             EEEEEECCCChHhC--------------------eeEEeecCCCcEEEEEEecCcc--cEEEEEEEccccCCeEEEEecc
Confidence            47778877653221                    122222222  25678888988  55543 222  3 457888887


Q ss_pred             CC-----ceEEEeecCCcE-EEEEEcCCCCEEEEE---cCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEE
Q psy10867        216 TG-----EDLLSLILDTRL-TCVAFDGTEDNIYMG---TSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLS  286 (343)
Q Consensus       216 ~~-----~~~~~~~~~~~i-~~~~~~~~~~~l~~~---~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  286 (343)
                      .+     +..........+ ..+... .+.+++..   ..++.|...++........        ...+..+...+.-..
T Consensus       261 ~~~~~~~~~~~l~~~~~~~~~~v~~~-~~~~yi~Tn~~a~~~~l~~~~l~~~~~~~~--------~~~l~~~~~~~~l~~  331 (414)
T PF02897_consen  261 DGGSPDAKPKLLSPREDGVEYYVDHH-GDRLYILTNDDAPNGRLVAVDLADPSPAEW--------WTVLIPEDEDVSLED  331 (414)
T ss_dssp             CTTTSS-SEEEEEESSSS-EEEEEEE-TTEEEEEE-TT-TT-EEEEEETTSTSGGGE--------EEEEE--SSSEEEEE
T ss_pred             ccCCCcCCcEEEeCCCCceEEEEEcc-CCEEEEeeCCCCCCcEEEEecccccccccc--------eeEEcCCCCceeEEE
Confidence            64     222222233333 333333 33333333   2245666666655432110        113344444332233


Q ss_pred             EccCCCEEE-EEeCCC--cEEEEecccceeeeecc--cCCceEEEEEccCCCeee
Q psy10867        287 CSITGITLL-SSSADE--TLKIWHTISRQCLRTIQ--HKGPVLGAFLGLLPPAIH  336 (343)
Q Consensus       287 ~s~~~~~l~-s~~~dg--~i~iwd~~~~~~~~~~~--~~~~v~~~~~sp~~~~l~  336 (343)
                      +...+.+|+ ....++  .|+++++..+.....+.  ..+.|..+...+++..+.
T Consensus       332 ~~~~~~~Lvl~~~~~~~~~l~v~~~~~~~~~~~~~~p~~g~v~~~~~~~~~~~~~  386 (414)
T PF02897_consen  332 VSLFKDYLVLSYRENGSSRLRVYDLDDGKESREIPLPEAGSVSGVSGDFDSDELR  386 (414)
T ss_dssp             EEEETTEEEEEEEETTEEEEEEEETT-TEEEEEEESSSSSEEEEEES-TT-SEEE
T ss_pred             EEEECCEEEEEEEECCccEEEEEECCCCcEEeeecCCcceEEeccCCCCCCCEEE
Confidence            334444444 444444  68889988344444444  445566666666665543

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....

>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=98.08  E-value=0.0051  Score=52.59  Aligned_cols=241  Identities=13%  Similarity=0.070  Sum_probs=123.9

Q ss_pred             cceEEEEeCCceEEEEEc-CC----CeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-e--c---------CCe
Q psy10867         38 SPHSMCLLGNDYVLGVEK-GK----PMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-S--I---------ETK  100 (343)
Q Consensus        38 ~v~~~~~~~~~~~~~~~~-~~----~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~--~---------d~~  100 (343)
                      .+....++|++++++.+- ..    ..++++|+.+++.+....... ....+.|.+|++.+.. .  .         ...
T Consensus       125 ~~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~~-~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~  203 (414)
T PF02897_consen  125 SLGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIENP-KFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQ  203 (414)
T ss_dssp             EEEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEEE-ESEEEEECTTSSEEEEEECSTTTSS-CCGCCEE
T ss_pred             EeeeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCccccc-ccceEEEeCCCCEEEEEEeCcccccccCCCCcE
Confidence            344678899998777653 22    369999999997663221111 2234999999886663 2  1         235


Q ss_pred             EEEEEccCCce--EEEecccCCC--eEEEEEecCCCEEEEecC---C-CeEEEeecCccceeeeeecCCCCCCCCccccc
Q psy10867        101 LHMWQISSGRL--LATASSHYQP--ITIVKWSADSNFIVTGGE---D-GTICVWQLSRLICKQTVAFGIPGSSGKGVTGL  172 (343)
Q Consensus       101 i~v~~~~~~~~--~~~~~~~~~~--v~~~~~~~~~~~l~s~~~---d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~  172 (343)
                      |+.|.+.+...  ...+......  ...+..++++++++....   + ..+.+.++......                  
T Consensus       204 v~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~~~~------------------  265 (414)
T PF02897_consen  204 VYRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDGGSP------------------  265 (414)
T ss_dssp             EEEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCTTTS------------------
T ss_pred             EEEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEeccccCCC------------------
Confidence            88888877632  2444443333  567888999998775432   2 45777777763100                  


Q ss_pred             cceeeeecccccce-EEEEeecCCCceEEEEe---eCCCeEEEEecCCCce---EEEe-ecCC--cEEEEEEcCCCCEEE
Q psy10867        173 TEPLHVKSQHSLPV-THVTLSKLGAKSRVASV---SHDRTCKIFDLCTGED---LLSL-ILDT--RLTCVAFDGTEDNIY  242 (343)
Q Consensus       173 ~~~~~~~~~~~~~v-~~~~~~~~~~~~~l~~~---~~d~~i~~wd~~~~~~---~~~~-~~~~--~i~~~~~~~~~~~l~  242 (343)
                      ......+......+ ..+... .+  .+++..   ...+.|.-.++.....   ...+ .+..  .+..+..  .+++|+
T Consensus       266 ~~~~~~l~~~~~~~~~~v~~~-~~--~~yi~Tn~~a~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~l~~~~~--~~~~Lv  340 (414)
T PF02897_consen  266 DAKPKLLSPREDGVEYYVDHH-GD--RLYILTNDDAPNGRLVAVDLADPSPAEWWTVLIPEDEDVSLEDVSL--FKDYLV  340 (414)
T ss_dssp             S-SEEEEEESSSS-EEEEEEE-TT--EEEEEE-TT-TT-EEEEEETTSTSGGGEEEEEE--SSSEEEEEEEE--ETTEEE
T ss_pred             cCCcEEEeCCCCceEEEEEcc-CC--EEEEeeCCCCCCcEEEEecccccccccceeEEcCCCCceeEEEEEE--ECCEEE
Confidence            00112222222233 333333 33  333332   2346777778877653   2122 2333  3444444  455666


Q ss_pred             EEcC-CC--cEEEEEee-cccccccccccCCCCCCccccccCcEEEEEEccCCCEEE--EEeC--CCcEEEEeccccee
Q psy10867        243 MGTS-EG--VIKSFCLR-QVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLL--SSSA--DETLKIWHTISRQC  313 (343)
Q Consensus       243 ~~~~-d~--~i~i~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~--s~~~--dg~i~iwd~~~~~~  313 (343)
                      .... ++  .|+++++. .... ...         .+. ..+.|..+...++++.+.  ..|.  -++++.||+.+++.
T Consensus       341 l~~~~~~~~~l~v~~~~~~~~~-~~~---------~~p-~~g~v~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~t~~~  408 (414)
T PF02897_consen  341 LSYRENGSSRLRVYDLDDGKES-REI---------PLP-EAGSVSGVSGDFDSDELRFSYSSFTTPPTVYRYDLATGEL  408 (414)
T ss_dssp             EEEEETTEEEEEEEETT-TEEE-EEE---------ESS-SSSEEEEEES-TT-SEEEEEEEETTEEEEEEEEETTTTCE
T ss_pred             EEEEECCccEEEEEECCCCcEE-eee---------cCC-cceEEeccCCCCCCCEEEEEEeCCCCCCEEEEEECCCCCE
Confidence            5433 33  67788877 3221 111         111 123355555555555333  2222  35788888888764

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....

>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea

Probab=98.08  E-value=0.003  Score=52.13  Aligned_cols=230  Identities=11%  Similarity=0.048  Sum_probs=103.7

Q ss_pred             CCCEEEE-e-cCCeEEEEEccCC----ceEEEecc---cC----CCeEEEEEecCCCEEEEec------CCCeEEEeecC
Q psy10867         89 DAAYIAV-S-IETKLHMWQISSG----RLLATASS---HY----QPITIVKWSADSNFIVTGG------EDGTICVWQLS  149 (343)
Q Consensus        89 ~~~~l~~-~-~d~~i~v~~~~~~----~~~~~~~~---~~----~~v~~~~~~~~~~~l~s~~------~dg~i~iwd~~  149 (343)
                      +.++|+. + ..+.|+|.|+.+.    ++.+.++.   +.    ..-..+..-|+|+.++++-      .-|.+.+.|-+
T Consensus        86 ~Rr~Li~PgL~SsrIyviD~~~dPr~P~l~KvIe~~ev~~k~g~s~PHT~Hclp~G~imIS~lGd~~G~g~Ggf~llD~~  165 (461)
T PF05694_consen   86 ERRYLILPGLRSSRIYVIDTKTDPRKPRLHKVIEPEEVFEKTGLSRPHTVHCLPDGRIMISALGDADGNGPGGFVLLDGE  165 (461)
T ss_dssp             -S-EEEEEBTTT--EEEEE--S-TTS-EEEEEE-HHHHHHHH-EEEEEEEEE-SS--EEEEEEEETTS-S--EEEEE-TT
T ss_pred             cCCcEEeeeeccCcEEEEECCCCCCCCceEeeeCHHHHHhhcCCCCCceeeecCCccEEEEeccCCCCCCCCcEEEEcCc
Confidence            4567776 5 5789999998743    44444432   11    1233455567898888742      23457788877


Q ss_pred             ccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEee--------------------CCCeE
Q psy10867        150 RLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVS--------------------HDRTC  209 (343)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~--------------------~d~~i  209 (343)
                      +.+.....+.                   -.+....-+.+-+.|..  +.+++..                    ...++
T Consensus       166 tf~v~g~We~-------------------~~~~~~~gYDfw~qpr~--nvMiSSeWg~P~~~~~Gf~~~d~~~~~yG~~l  224 (461)
T PF05694_consen  166 TFEVKGRWEK-------------------DRGPQPFGYDFWYQPRH--NVMISSEWGAPSMFEKGFNPEDLEAGKYGHSL  224 (461)
T ss_dssp             T--EEEE--S-------------------B-TT------EEEETTT--TEEEE-B---HHHHTT---TTTHHHH-S--EE
T ss_pred             cccccceecc-------------------CCCCCCCCCCeEEcCCC--CEEEEeccCChhhcccCCChhHhhcccccCeE
Confidence            7655443321                   01112334556666655  5666543                    23689


Q ss_pred             EEEecCCCceEEEeecCC---cEEEEEEc--CCCCEEEEEcC-CCcEEEEEe-eccc--ccccccccCC--------CCC
Q psy10867        210 KIFDLCTGEDLLSLILDT---RLTCVAFD--GTEDNIYMGTS-EGVIKSFCL-RQVP--RTRDHHIQDS--------TSN  272 (343)
Q Consensus       210 ~~wd~~~~~~~~~~~~~~---~i~~~~~~--~~~~~l~~~~~-d~~i~i~d~-~~~~--~~~~~~~~~~--------~~~  272 (343)
                      .+||+.+.+.++++....   ....+.|.  |+..+-++++. .++|..|-- ....  ......+...        ..+
T Consensus       225 ~vWD~~~r~~~Q~idLg~~g~~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~a~kVi~ip~~~v~~~~lp~ml  304 (461)
T PF05694_consen  225 HVWDWSTRKLLQTIDLGEEGQMPLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWAAEKVIDIPAKKVEGWILPEML  304 (461)
T ss_dssp             EEEETTTTEEEEEEES-TTEEEEEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEEEEEEEEE--EE--SS---GGG
T ss_pred             EEEECCCCcEeeEEecCCCCCceEEEEecCCCCccceEEEEeccceEEEEEEcCCCCeeeeEEEECCCcccCcccccccc
Confidence            999999999999998642   35566665  44555555433 444444432 2111  0011111000        011


Q ss_pred             CccccccCcEEEEEEccCCCEEEEE-eCCCcEEEEecccc---eeeeeccc-----------------CCceEEEEEccC
Q psy10867        273 PDFIGHEKQVTSLSCSITGITLLSS-SADETLKIWHTISR---QCLRTIQH-----------------KGPVLGAFLGLL  331 (343)
Q Consensus       273 ~~~~~~~~~v~~~~~s~~~~~l~s~-~~dg~i~iwd~~~~---~~~~~~~~-----------------~~~v~~~~~sp~  331 (343)
                      ..+..-..-|+.+.+|.|.++|..+ -.+|.|+.||+..-   ++..++..                 .+...-+..|-|
T Consensus       305 ~~~~~~P~LitDI~iSlDDrfLYvs~W~~GdvrqYDISDP~~Pkl~gqv~lGG~~~~~~~~~v~g~~l~GgPqMvqlS~D  384 (461)
T PF05694_consen  305 KPFGAVPPLITDILISLDDRFLYVSNWLHGDVRQYDISDPFNPKLVGQVFLGGSIRKGDHPVVKGKRLRGGPQMVQLSLD  384 (461)
T ss_dssp             GGG-EE------EEE-TTS-EEEEEETTTTEEEEEE-SSTTS-EEEEEEE-BTTTT-B--TTS------S----EEE-TT
T ss_pred             cccccCCCceEeEEEccCCCEEEEEcccCCcEEEEecCCCCCCcEEeEEEECcEeccCCCccccccccCCCCCeEEEccC
Confidence            2222334568999999999988755 46899999999753   33333221                 223467889999


Q ss_pred             CCeeeecc
Q psy10867        332 PPAIHDYD  339 (343)
Q Consensus       332 ~~~l~~~~  339 (343)
                      |+.|+..+
T Consensus       385 GkRlYvTn  392 (461)
T PF05694_consen  385 GKRLYVTN  392 (461)
T ss_dssp             SSEEEEE-
T ss_pred             CeEEEEEe
Confidence            99988653

The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.

>smart00320 WD40 WD40 repeats

Probab=98.04  E-value=2.1e-05  Score=41.20  Aligned_cols=39  Identities=38%  Similarity=0.777  Sum_probs=34.2

Q ss_pred             CceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEee
Q psy10867        109 GRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQ  147 (343)
Q Consensus       109 ~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd  147 (343)
                      +++...+..|...|.++.|.+++..+++++.|+.+++|+
T Consensus         2 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~   40 (40)
T smart00320        2 GELLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD   40 (40)
T ss_pred             cEEEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence            345667778889999999999999999999999999996

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.

>KOG4640|consensus

Probab=97.97  E-value=5.5e-05  Score=63.97  Aligned_cols=93  Identities=22%  Similarity=0.280  Sum_probs=75.7

Q ss_pred             CCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceE-EEEeecCCCc
Q psy10867        119 YQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVT-HVTLSKLGAK  197 (343)
Q Consensus       119 ~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~  197 (343)
                      ...+.-+.|+|.-..+|.+..+|.|.+..++- +                      .+-.+.-+...++ +++|.|+|  
T Consensus        20 ~~~i~~~ewnP~~dLiA~~t~~gelli~R~n~-q----------------------Rlwtip~p~~~v~~sL~W~~DG--   74 (665)
T KOG4640|consen   20 PINIKRIEWNPKMDLIATRTEKGELLIHRLNW-Q----------------------RLWTIPIPGENVTASLCWRPDG--   74 (665)
T ss_pred             ccceEEEEEcCccchhheeccCCcEEEEEecc-c----------------------eeEeccCCCCccceeeeecCCC--
Confidence            34678899999999999999999999888873 2                      3333344556666 99999999  


Q ss_pred             eEEEEeeCCCeEEEEecCCCceEEE--eecCCcEEEEEEcC
Q psy10867        198 SRVASVSHDRTCKIFDLCTGEDLLS--LILDTRLTCVAFDG  236 (343)
Q Consensus       198 ~~l~~~~~d~~i~~wd~~~~~~~~~--~~~~~~i~~~~~~~  236 (343)
                      +.++.|-.||+|++.|.+++..+..  +.....|.++-|++
T Consensus        75 kllaVg~kdG~I~L~Dve~~~~l~~~~~s~e~~is~~~w~~  115 (665)
T KOG4640|consen   75 KLLAVGFKDGTIRLHDVEKGGRLVSFLFSVETDISKGIWDR  115 (665)
T ss_pred             CEEEEEecCCeEEEEEccCCCceeccccccccchheeeccc
Confidence            8999999999999999999998887  44567788888874

>PRK13616 lipoprotein LpqB; Provisional

Probab=97.91  E-value=0.0061  Score=53.98  Aligned_cols=196  Identities=16%  Similarity=0.178  Sum_probs=103.3

Q ss_pred             cceEEEEECCCCCEEEEec-------CC--eEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCe-EEEeec
Q psy10867         79 GRISSMQASPDAAYIAVSI-------ET--KLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGT-ICVWQL  148 (343)
Q Consensus        79 ~~v~~~~~s~~~~~l~~~~-------d~--~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~-i~iwd~  148 (343)
                      ..+...+++|||+.++...       |.  .|.+++. .+.......+.  ....-.|+|+|+.+++...... +++.+-
T Consensus       350 ~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~-gg~~~~lt~g~--~~t~PsWspDG~~lw~v~dg~~~~~v~~~  426 (591)
T PRK13616        350 GNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPL-GGVAVQVLEGH--SLTRPSWSLDADAVWVVVDGNTVVRVIRD  426 (591)
T ss_pred             cCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeC-CCcceeeecCC--CCCCceECCCCCceEEEecCcceEEEecc
Confidence            4678999999999888522       33  5666664 23333333332  3788999999988887754322 223222


Q ss_pred             CccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEE---EecCCCce-E---E
Q psy10867        149 SRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKI---FDLCTGED-L---L  221 (343)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~---wd~~~~~~-~---~  221 (343)
                      .....+......           ..+...   .....|..+.|+|+|  ..++... ++.|.+   -....|+. +   .
T Consensus       427 ~~~gql~~~~vd-----------~ge~~~---~~~g~Issl~wSpDG--~RiA~i~-~g~v~Va~Vvr~~~G~~~l~~~~  489 (591)
T PRK13616        427 PATGQLARTPVD-----------ASAVAS---RVPGPISELQLSRDG--VRAAMII-GGKVYLAVVEQTEDGQYALTNPR  489 (591)
T ss_pred             CCCceEEEEecc-----------Cchhhh---ccCCCcCeEEECCCC--CEEEEEE-CCEEEEEEEEeCCCCceeecccE
Confidence            111111100000           000111   234579999999999  5665544 467776   44444541 1   1


Q ss_pred             Eee--cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeC
Q psy10867        222 SLI--LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSA  299 (343)
Q Consensus       222 ~~~--~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~  299 (343)
                      .+.  ....+.++.|.+++.++ ++..++...+|.+.-......        ...-......+..++-+++  .++....
T Consensus       490 ~l~~~l~~~~~~l~W~~~~~L~-V~~~~~~~~v~~v~vDG~~~~--------~~~~~n~~~~v~~vaa~~~--~iyv~~~  558 (591)
T PRK13616        490 EVGPGLGDTAVSLDWRTGDSLV-VGRSDPEHPVWYVNLDGSNSD--------ALPSRNLSAPVVAVAASPS--TVYVTDA  558 (591)
T ss_pred             EeecccCCccccceEecCCEEE-EEecCCCCceEEEecCCcccc--------ccCCCCccCceEEEecCCc--eEEEEcC
Confidence            121  23346889999998855 555555555555443211110        0001112456777776653  4555566


Q ss_pred             CCcEEE
Q psy10867        300 DETLKI  305 (343)
Q Consensus       300 dg~i~i  305 (343)
                      +|.+.+
T Consensus       559 ~g~~~l  564 (591)
T PRK13616        559 RAVLQL  564 (591)
T ss_pred             CceEEe
Confidence            664443

>KOG1897|consensus

Probab=97.91  E-value=0.01  Score=53.65  Aligned_cols=214  Identities=14%  Similarity=0.099  Sum_probs=133.0

Q ss_pred             eEEEEecCCceEEEEEecCCC---CcceEEEEeCC-ceEEEEEcC----------CCeEEEEeCCCcccceecc--cCCc
Q psy10867         16 AISVWEPKGGTLLMSYKGASV---LSPHSMCLLGN-DYVLGVEKG----------KPMIQAWPVNSQEKAQLRL--ICPG   79 (343)
Q Consensus        16 ~i~iwd~~~~~~~~~~~~~~~---~~v~~~~~~~~-~~~~~~~~~----------~~~i~iw~~~~~~~~~~~~--~~~~   79 (343)
                      .++++|-.+-+.+...+....   ..+.+..|..| +.++++|..          .|.|.++.....+.++...  .-.+
T Consensus       751 ~l~vlD~nTf~vl~~hef~~~E~~~Si~s~~~~~d~~t~~vVGT~~v~Pde~ep~~GRIivfe~~e~~~L~~v~e~~v~G  830 (1096)
T KOG1897|consen  751 FLRVLDQNTFEVLSSHEFERNETALSIISCKFTDDPNTYYVVGTGLVYPDENEPVNGRIIVFEFEELNSLELVAETVVKG  830 (1096)
T ss_pred             EEEEecCCceeEEeeccccccceeeeeeeeeecCCCceEEEEEEEeeccCCCCcccceEEEEEEecCCceeeeeeeeecc
Confidence            567888877776665443321   24445557766 666666642          3778888777644333322  2234


Q ss_pred             ceEEEEECCCCCEEEEecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeec
Q psy10867         80 RISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAF  159 (343)
Q Consensus        80 ~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~  159 (343)
                      .+.++.-- +|+++| +-+..|++|++.+++.++.-..+..++..+...-.++.++.|..=+.+.+...+..+-.-    
T Consensus       831 av~aL~~f-ngkllA-~In~~vrLye~t~~~eLr~e~~~~~~~~aL~l~v~gdeI~VgDlm~Sitll~y~~~eg~f----  904 (1096)
T KOG1897|consen  831 AVYALVEF-NGKLLA-GINQSVRLYEWTTERELRIECNISNPIIALDLQVKGDEIAVGDLMRSITLLQYKGDEGNF----  904 (1096)
T ss_pred             ceeehhhh-CCeEEE-ecCcEEEEEEccccceehhhhcccCCeEEEEEEecCcEEEEeeccceEEEEEEeccCCce----
Confidence            55555433 555555 456889999999887887777888899999998899999999877777665554432100    


Q ss_pred             CCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCC-------------------CceE
Q psy10867        160 GIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCT-------------------GEDL  220 (343)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~-------------------~~~~  220 (343)
                                     ......-+..+.+++.+-.+.   .++-+..+|.+.+...++                   |+.+
T Consensus       905 ---------------~evArD~~p~Wmtaveil~~d---~ylgae~~gNlf~v~~d~~~~td~eR~~l~~~~~~hlGelv  966 (1096)
T KOG1897|consen  905 ---------------EEVARDYNPNWMTAVEILDDD---TYLGAENSGNLFTVRKDSDATTDEERQILEEVGKFHLGELV  966 (1096)
T ss_pred             ---------------EEeehhhCccceeeEEEecCc---eEEeecccccEEEEEecCCCCchhhhhcccceeeEEeccce
Confidence                           112223466777777777664   455666777777664432                   2223


Q ss_pred             EEeecCCcEEE--EEEcCCCCEEEEEcCCCcEEEE
Q psy10867        221 LSLILDTRLTC--VAFDGTEDNIYMGTSEGVIKSF  253 (343)
Q Consensus       221 ~~~~~~~~i~~--~~~~~~~~~l~~~~~d~~i~i~  253 (343)
                      ..+.|..-+.+  -..+|-+..++.|+.+|.|-+.
T Consensus       967 n~f~hg~lv~~~~~s~~~~~~~vlfgTv~GsIG~i 1001 (1096)
T KOG1897|consen  967 NKFRHGSLVMQLGDSMIPLEPKVLFGTVNGSIGII 1001 (1096)
T ss_pred             eeeeecceEeeccccccCCCCcEEEEEccceEEEE
Confidence            33334444444  1334556678889999988654

>smart00320 WD40 WD40 repeats

Probab=97.90  E-value=1.7e-05  Score=41.60  Aligned_cols=35  Identities=40%  Similarity=0.579  Sum_probs=31.0

Q ss_pred             CccccccCcEEEEEEccCCCEEEEEeCCCcEEEEe
Q psy10867        273 PDFIGHEKQVTSLSCSITGITLLSSSADETLKIWH  307 (343)
Q Consensus       273 ~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd  307 (343)
                      ..+..|...|.++.|+++++++++++.|+.+++|+
T Consensus         6 ~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~   40 (40)
T smart00320        6 KTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD   40 (40)
T ss_pred             EEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence            34556888999999999999999999999999996

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.

>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2

Probab=97.82  E-value=0.0086  Score=46.40  Aligned_cols=197  Identities=11%  Similarity=0.030  Sum_probs=119.1

Q ss_pred             eEEEEEecCCCCcceEEEEeCCceEEEEEcCCC--eEEEEeCCCcccceecc-cCCcceEEEEECCCCCEEEEecCCeEE
Q psy10867         26 TLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKP--MIQAWPVNSQEKAQLRL-ICPGRISSMQASPDAAYIAVSIETKLH  102 (343)
Q Consensus        26 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~--~i~iw~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~d~~i~  102 (343)
                      +.+.++......--..+.|..++.++-+.+.-|  .|+.+|+.+++...... ...---..+....|.-+..+=.++...
T Consensus        34 ~vv~~ypHd~~aFTQGL~~~~~g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~~~FgEGit~~~d~l~qLTWk~~~~f  113 (264)
T PF05096_consen   34 EVVETYPHDPTAFTQGLEFLDDGTLYESTGLYGQSSLRKVDLETGKVLQSVPLPPRYFGEGITILGDKLYQLTWKEGTGF  113 (264)
T ss_dssp             EEEEEEE--TT-EEEEEEEEETTEEEEEECSTTEEEEEEEETTTSSEEEEEE-TTT--EEEEEEETTEEEEEESSSSEEE
T ss_pred             EEEEECCCCCcccCccEEecCCCEEEEeCCCCCcEEEEEEECCCCcEEEEEECCccccceeEEEECCEEEEEEecCCeEE
Confidence            445666655542456788877777766654435  89999999988764332 222222344444343334455789999


Q ss_pred             EEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeeccc
Q psy10867        103 MWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQH  182 (343)
Q Consensus       103 v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (343)
                      +||..+-+.+.++.- .+.=+.++  .+++.|+.......+..+|..+.+....+.                 +..-...
T Consensus       114 ~yd~~tl~~~~~~~y-~~EGWGLt--~dg~~Li~SDGS~~L~~~dP~~f~~~~~i~-----------------V~~~g~p  173 (264)
T PF05096_consen  114 VYDPNTLKKIGTFPY-PGEGWGLT--SDGKRLIMSDGSSRLYFLDPETFKEVRTIQ-----------------VTDNGRP  173 (264)
T ss_dssp             EEETTTTEEEEEEE--SSS--EEE--ECSSCEEEE-SSSEEEEE-TTT-SEEEEEE------------------EETTEE
T ss_pred             EEccccceEEEEEec-CCcceEEE--cCCCEEEEECCccceEEECCcccceEEEEE-----------------EEECCEE
Confidence            999999888887753 34557777  466777776667889999998876666543                 1111112


Q ss_pred             ccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeec----------------CCcEEEEEEcCCCCEEEEEc
Q psy10867        183 SLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLIL----------------DTRLTCVAFDGTEDNIYMGT  245 (343)
Q Consensus       183 ~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~----------------~~~i~~~~~~~~~~~l~~~~  245 (343)
                      -..++.+.+. +|  .+.|-.-....|...|..+|+....+..                ..-.+.|+++|..+.+++.+
T Consensus       174 v~~LNELE~i-~G--~IyANVW~td~I~~Idp~tG~V~~~iDls~L~~~~~~~~~~~~~~dVLNGIAyd~~~~~l~vTG  249 (264)
T PF05096_consen  174 VSNLNELEYI-NG--KIYANVWQTDRIVRIDPETGKVVGWIDLSGLRPEVGRDKSRQPDDDVLNGIAYDPETDRLFVTG  249 (264)
T ss_dssp             ---EEEEEEE-TT--EEEEEETTSSEEEEEETTT-BEEEEEE-HHHHHHHTSTTST--TTS-EEEEEEETTTTEEEEEE
T ss_pred             CCCcEeEEEE-cC--EEEEEeCCCCeEEEEeCCCCeEEEEEEhhHhhhcccccccccccCCeeEeEeEeCCCCEEEEEe
Confidence            2345566665 44  5666666677888889999988776631                23488999999877666544

3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.

>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=97.82  E-value=0.0086  Score=46.34  Aligned_cols=262  Identities=12%  Similarity=0.108  Sum_probs=144.7

Q ss_pred             eEEEEecCCceEEEEEecCCCCcceEEEEeCCc-eEEEEEcCCC-eEEEEeCCCcccceecccCCcc--eEEEEECCCCC
Q psy10867         16 AISVWEPKGGTLLMSYKGASVLSPHSMCLLGND-YVLGVEKGKP-MIQAWPVNSQEKAQLRLICPGR--ISSMQASPDAA   91 (343)
Q Consensus        16 ~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~~~-~i~iw~~~~~~~~~~~~~~~~~--v~~~~~s~~~~   91 (343)
                      .+...+ +.|+++.......  .-..++++|.- +-++.+..-| ...++|.++.+...++...+++  .-.=.|||||.
T Consensus        50 g~a~~~-eaGk~v~~~~lpa--R~Hgi~~~p~~~ravafARrPGtf~~vfD~~~~~~pv~~~s~~~RHfyGHGvfs~dG~  126 (366)
T COG3490          50 GAATLS-EAGKIVFATALPA--RGHGIAFHPALPRAVAFARRPGTFAMVFDPNGAQEPVTLVSQEGRHFYGHGVFSPDGR  126 (366)
T ss_pred             eEEEEc-cCCceeeeeeccc--ccCCeecCCCCcceEEEEecCCceEEEECCCCCcCcEEEecccCceeecccccCCCCc
Confidence            344444 3577776655444  45678888864 4444444444 4578899888777655433332  22346999999


Q ss_pred             EEEEec------CCeEEEEEccCC-ceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEe-e-------cCccceeee
Q psy10867         92 YIAVSI------ETKLHMWQISSG-RLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVW-Q-------LSRLICKQT  156 (343)
Q Consensus        92 ~l~~~~------d~~i~v~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw-d-------~~~~~~~~~  156 (343)
                      +|.+..      .|.|-|||.+.+ +.+..+..|.-.-..+.|.+||+.++.+.  |-|..- |       +.+.+....
T Consensus       127 ~LYATEndfd~~rGViGvYd~r~~fqrvgE~~t~GiGpHev~lm~DGrtlvvan--GGIethpdfgR~~lNldsMePSlv  204 (366)
T COG3490         127 LLYATENDFDPNRGVIGVYDAREGFQRVGEFSTHGIGPHEVTLMADGRTLVVAN--GGIETHPDFGRTELNLDSMEPSLV  204 (366)
T ss_pred             EEEeecCCCCCCCceEEEEecccccceecccccCCcCcceeEEecCCcEEEEeC--CceecccccCccccchhhcCccEE
Confidence            999742      368999998754 44566777877778999999999888764  334433 2       222211111


Q ss_pred             eecCCCCCCCCccccccceeeeec--ccccceEEEEeecCCCceEEEEeeCCC-----eEEEEecCCCceEEEeec----
Q psy10867        157 VAFGIPGSSGKGVTGLTEPLHVKS--QHSLPVTHVTLSKLGAKSRVASVSHDR-----TCKIFDLCTGEDLLSLIL----  225 (343)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~l~~~~~d~-----~i~~wd~~~~~~~~~~~~----  225 (343)
                      +-.   ...+..     -....+.  .+...|..++..+++  ..++.+-..|     --.+=-...++.+..+..    
T Consensus       205 lld---~atG~l-----iekh~Lp~~l~~lSiRHld~g~dg--tvwfgcQy~G~~~d~ppLvg~~~~g~~l~~~~~pee~  274 (366)
T COG3490         205 LLD---AATGNL-----IEKHTLPASLRQLSIRHLDIGRDG--TVWFGCQYRGPRNDLPPLVGHFRKGEPLEFLDLPEEQ  274 (366)
T ss_pred             EEe---ccccch-----hhhccCchhhhhcceeeeeeCCCC--cEEEEEEeeCCCccCCcceeeccCCCcCcccCCCHHH
Confidence            100   000000     0011111  344567777877777  3433322211     111112234444444432    


Q ss_pred             ----CCcEEEEEEcCCCCEEEEEcC-CCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCC
Q psy10867        226 ----DTRLTCVAFDGTEDNIYMGTS-EGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSAD  300 (343)
Q Consensus       226 ----~~~i~~~~~~~~~~~l~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d  300 (343)
                          ...|-+++.+.+..+++..+- .+...+||..++....+..         +.    ....+  -+...-++..+.+
T Consensus       275 ~~~~anYigsiA~n~~~glV~lTSP~GN~~vi~da~tG~vv~~a~---------l~----daaGv--a~~~~gf~vssg~  339 (366)
T COG3490         275 TAAFANYIGSIAANRRDGLVALTSPRGNRAVIWDAATGAVVSEAA---------LP----DAAGV--AAAKGGFAVSSGQ  339 (366)
T ss_pred             HHHHHhhhhheeecccCCeEEEecCCCCeEEEEEcCCCcEEeccc---------cc----ccccc--eeccCceEEecCC
Confidence                345778888877666665544 5567899998876543211         11    11122  2334446666677


Q ss_pred             CcEEEEe
Q psy10867        301 ETLKIWH  307 (343)
Q Consensus       301 g~i~iwd  307 (343)
                      |.+.++.
T Consensus       340 G~~~~~s  346 (366)
T COG3490         340 GRIIFYS  346 (366)
T ss_pred             ceEEecc
Confidence            8888774

>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea

Probab=97.81  E-value=0.014  Score=48.47  Aligned_cols=234  Identities=15%  Similarity=0.057  Sum_probs=103.3

Q ss_pred             EEEecC-CCCeEEEEecCC----ceEEEEEecC---C----CCcceEEEEeCCceEEEEEc--C----CCeEEEEeCCCc
Q psy10867          7 VAFSYD-GSGAISVWEPKG----GTLLMSYKGA---S----VLSPHSMCLLGNDYVLGVEK--G----KPMIQAWPVNSQ   68 (343)
Q Consensus         7 ~~~s~~-~dg~i~iwd~~~----~~~~~~~~~~---~----~~~v~~~~~~~~~~~~~~~~--~----~~~i~iw~~~~~   68 (343)
                      .++.|+ .++.|+|.|+.+    -+..+.++..   .    . ....+.--|+|.+++++-  .    .|-+.+.|-++.
T Consensus        89 ~Li~PgL~SsrIyviD~~~dPr~P~l~KvIe~~ev~~k~g~s-~PHT~Hclp~G~imIS~lGd~~G~g~Ggf~llD~~tf  167 (461)
T PF05694_consen   89 YLILPGLRSSRIYVIDTKTDPRKPRLHKVIEPEEVFEKTGLS-RPHTVHCLPDGRIMISALGDADGNGPGGFVLLDGETF  167 (461)
T ss_dssp             EEEEEBTTT--EEEEE--S-TTS-EEEEEE-HHHHHHHH-EE-EEEEEEE-SS--EEEEEEEETTS-S--EEEEE-TTT-
T ss_pred             cEEeeeeccCcEEEEECCCCCCCCceEeeeCHHHHHhhcCCC-CCceeeecCCccEEEEeccCCCCCCCCcEEEEcCccc
Confidence            344444 578999999874    4555555541   1    1 334445558886666532  2    257888888876


Q ss_pred             ccceeccc---CCcceEEEEECCCCCEEEEec---------------------CCeEEEEEccCCceEEEecccC--CCe
Q psy10867         69 EKAQLRLI---CPGRISSMQASPDAAYIAVSI---------------------ETKLHMWQISSGRLLATASSHY--QPI  122 (343)
Q Consensus        69 ~~~~~~~~---~~~~v~~~~~s~~~~~l~~~~---------------------d~~i~v~~~~~~~~~~~~~~~~--~~v  122 (343)
                      +.......   ....-+.+.|.|..+.+++++                     ..++.+||+.+.+.++++.--.  ...
T Consensus       168 ~v~g~We~~~~~~~~gYDfw~qpr~nvMiSSeWg~P~~~~~Gf~~~d~~~~~yG~~l~vWD~~~r~~~Q~idLg~~g~~p  247 (461)
T PF05694_consen  168 EVKGRWEKDRGPQPFGYDFWYQPRHNVMISSEWGAPSMFEKGFNPEDLEAGKYGHSLHVWDWSTRKLLQTIDLGEEGQMP  247 (461)
T ss_dssp             -EEEE--SB-TT------EEEETTTTEEEE-B---HHHHTT---TTTHHHH-S--EEEEEETTTTEEEEEEES-TTEEEE
T ss_pred             cccceeccCCCCCCCCCCeEEcCCCCEEEEeccCChhhcccCCChhHhhcccccCeEEEEECCCCcEeeEEecCCCCCce
Confidence            66543332   123356677788777777642                     2469999999999999886432  235


Q ss_pred             EEEEEecC--CCE-EEEecCCCeEEEeec-Ccccee--eeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCC
Q psy10867        123 TIVKWSAD--SNF-IVTGGEDGTICVWQL-SRLICK--QTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGA  196 (343)
Q Consensus       123 ~~~~~~~~--~~~-l~s~~~dg~i~iwd~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  196 (343)
                      ..+.|..+  ..+ ++.+.-..+|..|-- ..+.-.  ..+.++.....+.   ...+.++.+..-..-|+.|.+|.+.+
T Consensus       248 LEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~a~kVi~ip~~~v~~~---~lp~ml~~~~~~P~LitDI~iSlDDr  324 (461)
T PF05694_consen  248 LEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWAAEKVIDIPAKKVEGW---ILPEMLKPFGAVPPLITDILISLDDR  324 (461)
T ss_dssp             EEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEEEEEEEEE--EE--SS------GGGGGG-EE------EEE-TTS-
T ss_pred             EEEEecCCCCccceEEEEeccceEEEEEEcCCCCeeeeEEEECCCcccCcc---cccccccccccCCCceEeEEEccCCC
Confidence            67777654  333 333344555655544 222211  1111100000000   00000111111235588999999983


Q ss_pred             ceEEEEeeCCCeEEEEecCCCce---EEEeec-----------------CCcEEEEEEcCCCCEEEEEc
Q psy10867        197 KSRVASVSHDRTCKIFDLCTGED---LLSLIL-----------------DTRLTCVAFDGTEDNIYMGT  245 (343)
Q Consensus       197 ~~~l~~~~~d~~i~~wd~~~~~~---~~~~~~-----------------~~~i~~~~~~~~~~~l~~~~  245 (343)
                       .+.++.-.+|.++.||+.....   ..++..                 .+...-+..|.||+.|++.+
T Consensus       325 -fLYvs~W~~GdvrqYDISDP~~Pkl~gqv~lGG~~~~~~~~~v~g~~l~GgPqMvqlS~DGkRlYvTn  392 (461)
T PF05694_consen  325 -FLYVSNWLHGDVRQYDISDPFNPKLVGQVFLGGSIRKGDHPVVKGKRLRGGPQMVQLSLDGKRLYVTN  392 (461)
T ss_dssp             -EEEEEETTTTEEEEEE-SSTTS-EEEEEEE-BTTTT-B--TTS------S----EEE-TTSSEEEEE-
T ss_pred             -EEEEEcccCCcEEEEecCCCCCCcEEeEEEECcEeccCCCccccccccCCCCCeEEEccCCeEEEEEe
Confidence             3444555699999999986543   222221                 12346678888998888754

The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.

>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=97.78  E-value=0.0099  Score=46.01  Aligned_cols=220  Identities=10%  Similarity=0.059  Sum_probs=122.4

Q ss_pred             eEEEEecCCceEEEEEecCCCC-cceEEEEeCCceEEEEEcCC-----CeEEEEeCCCcc-cceecccCCcceEEEEECC
Q psy10867         16 AISVWEPKGGTLLMSYKGASVL-SPHSMCLLGNDYVLGVEKGK-----PMIQAWPVNSQE-KAQLRLICPGRISSMQASP   88 (343)
Q Consensus        16 ~i~iwd~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~-----~~i~iw~~~~~~-~~~~~~~~~~~v~~~~~s~   88 (343)
                      ...++|....+...++...++. -.-.=.|||||.++.+..+|     |.|-|||...+- .+-.+..|.-.-..+.+.+
T Consensus        92 f~~vfD~~~~~~pv~~~s~~~RHfyGHGvfs~dG~~LYATEndfd~~rGViGvYd~r~~fqrvgE~~t~GiGpHev~lm~  171 (366)
T COG3490          92 FAMVFDPNGAQEPVTLVSQEGRHFYGHGVFSPDGRLLYATENDFDPNRGVIGVYDAREGFQRVGEFSTHGIGPHEVTLMA  171 (366)
T ss_pred             eEEEECCCCCcCcEEEecccCceeecccccCCCCcEEEeecCCCCCCCceEEEEecccccceecccccCCcCcceeEEec
Confidence            3467888777665554332210 01122589999998886554     789999987432 2344556666678899999


Q ss_pred             CCCEEEEecCC-------------------eEEEEEccCCceEEE--ec--ccCCCeEEEEEecCCCEEEEecCCCeE--
Q psy10867         89 DAAYIAVSIET-------------------KLHMWQISSGRLLAT--AS--SHYQPITIVKWSADSNFIVTGGEDGTI--  143 (343)
Q Consensus        89 ~~~~l~~~~d~-------------------~i~v~~~~~~~~~~~--~~--~~~~~v~~~~~~~~~~~l~s~~~dg~i--  143 (343)
                      ||+.++....|                   .+.+.|..+|+++.+  +.  .+.-.+..++..+|+..++-+-..|.-  
T Consensus       172 DGrtlvvanGGIethpdfgR~~lNldsMePSlvlld~atG~liekh~Lp~~l~~lSiRHld~g~dgtvwfgcQy~G~~~d  251 (366)
T COG3490         172 DGRTLVVANGGIETHPDFGRTELNLDSMEPSLVLLDAATGNLIEKHTLPASLRQLSIRHLDIGRDGTVWFGCQYRGPRND  251 (366)
T ss_pred             CCcEEEEeCCceecccccCccccchhhcCccEEEEeccccchhhhccCchhhhhcceeeeeeCCCCcEEEEEEeeCCCcc
Confidence            99999873221                   144555555654432  22  244567778887777766554433210  


Q ss_pred             ---EEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceE
Q psy10867        144 ---CVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDL  220 (343)
Q Consensus       144 ---~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~  220 (343)
                         .+=....++...               ...-+......-...|-+++.+.+.. -..++.-..+...+||..+|..+
T Consensus       252 ~ppLvg~~~~g~~l~---------------~~~~pee~~~~~anYigsiA~n~~~g-lV~lTSP~GN~~vi~da~tG~vv  315 (366)
T COG3490         252 LPPLVGHFRKGEPLE---------------FLDLPEEQTAAFANYIGSIAANRRDG-LVALTSPRGNRAVIWDAATGAVV  315 (366)
T ss_pred             CCcceeeccCCCcCc---------------ccCCCHHHHHHHHhhhhheeecccCC-eEEEecCCCCeEEEEEcCCCcEE
Confidence               000000110000               00011111222345677888876552 34444445567789999999887


Q ss_pred             EEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEE
Q psy10867        221 LSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFC  254 (343)
Q Consensus       221 ~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d  254 (343)
                      ..-....   +.-.-+...-+++.+.+|.+.++.
T Consensus       316 ~~a~l~d---aaGva~~~~gf~vssg~G~~~~~s  346 (366)
T COG3490         316 SEAALPD---AAGVAAAKGGFAVSSGQGRIIFYS  346 (366)
T ss_pred             ecccccc---cccceeccCceEEecCCceEEecc
Confidence            6543211   111223345566677788887773

>KOG2444|consensus

Probab=97.76  E-value=4.4e-05  Score=56.44  Aligned_cols=102  Identities=13%  Similarity=0.114  Sum_probs=62.7

Q ss_pred             eEEEEeeCCCeEEEEecCCCceEEE-ee-cCCcEEE-EEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCc
Q psy10867        198 SRVASVSHDRTCKIFDLCTGEDLLS-LI-LDTRLTC-VAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPD  274 (343)
Q Consensus       198 ~~l~~~~~d~~i~~wd~~~~~~~~~-~~-~~~~i~~-~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~  274 (343)
                      ..++.|+.+|.|.+|...-...... +. ....+.+ +.--.++.+..+++.+|.|+.|+.......           ..
T Consensus        71 ~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~-----------g~  139 (238)
T KOG2444|consen   71 AKLMVGTSDGAVYVFNWNLEGAHSDRVCSGEESIDLGIPNGRDSSLGCVGAQDGRIRACNIKPNKVL-----------GY  139 (238)
T ss_pred             ceEEeecccceEEEecCCccchHHHhhhcccccceeccccccccceeEEeccCCceeeeccccCcee-----------ee
Confidence            5789999999999998652111111 11 1222222 222334568888999999999998765432           22


Q ss_pred             ccccc-CcEEEEEEccCCCEEEEE--eCCCcEEEEeccc
Q psy10867        275 FIGHE-KQVTSLSCSITGITLLSS--SADETLKIWHTIS  310 (343)
Q Consensus       275 ~~~~~-~~v~~~~~s~~~~~l~s~--~~dg~i~iwd~~~  310 (343)
                      ...|+ .++..+..+..+++++.+  |.|..++.|++..
T Consensus       140 ~g~h~~~~~e~~ivv~sd~~i~~a~~S~d~~~k~W~ve~  178 (238)
T KOG2444|consen  140 VGQHNFESGEELIVVGSDEFLKIADTSHDRVLKKWNVEK  178 (238)
T ss_pred             eccccCCCcceeEEecCCceEEeeccccchhhhhcchhh
Confidence            33344 445555555566677766  7777788887754

>KOG2395|consensus

Probab=97.71  E-value=0.0084  Score=50.42  Aligned_cols=139  Identities=9%  Similarity=0.050  Sum_probs=97.9

Q ss_pred             EEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCce--------EEEEEcCCCeEEEEeCCCccc--ceecc-
Q psy10867          7 VAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDY--------VLGVEKGKPMIQAWPVNSQEK--AQLRL-   75 (343)
Q Consensus         7 ~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~--------~~~~~~~~~~i~iw~~~~~~~--~~~~~-   75 (343)
                      ++.++.....|+-.|++.|+.+..++.+..  |.-+.+.|+.+        -++ |-++..|.-||..-...  +.... 
T Consensus       348 il~~~~~~~~l~klDIE~GKIVeEWk~~~d--i~mv~~t~d~K~~Ql~~e~Tlv-GLs~n~vfriDpRv~~~~kl~~~q~  424 (644)
T KOG2395|consen  348 ILMDGGEQDKLYKLDIERGKIVEEWKFEDD--INMVDITPDFKFAQLTSEQTLV-GLSDNSVFRIDPRVQGKNKLAVVQS  424 (644)
T ss_pred             EeeCCCCcCcceeeecccceeeeEeeccCC--cceeeccCCcchhcccccccEE-eecCCceEEecccccCcceeeeeec
Confidence            344555567788899999999999999884  66677777642        223 33447888888763221  11111 


Q ss_pred             ---cCCcceEEEEECCCCCEEEEecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecC
Q psy10867         76 ---ICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLS  149 (343)
Q Consensus        76 ---~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~  149 (343)
                         .......|.+-..+|.+++++.+|.|++||--..+....+++...+|..+..+.+|++|+..+. ..+.+-++.
T Consensus       425 kqy~~k~nFsc~aTT~sG~IvvgS~~GdIRLYdri~~~AKTAlPgLG~~I~hVdvtadGKwil~Tc~-tyLlLi~t~  500 (644)
T KOG2395|consen  425 KQYSTKNNFSCFATTESGYIVVGSLKGDIRLYDRIGRRAKTALPGLGDAIKHVDVTADGKWILATCK-TYLLLIDTL  500 (644)
T ss_pred             cccccccccceeeecCCceEEEeecCCcEEeehhhhhhhhhcccccCCceeeEEeeccCcEEEEecc-cEEEEEEEe
Confidence               2234577888888888888899999999996333334457788889999999999998876554 667777654

>KOG2079|consensus

Probab=97.70  E-value=0.0028  Score=57.61  Aligned_cols=108  Identities=12%  Similarity=0.231  Sum_probs=76.5

Q ss_pred             eEEEEeCCceEEEEEcCCCeEEEEeCCCccc-ceecccCCcceEEEEECCCCCEEEEe-cCCeEEEEEccCCceEEEecc
Q psy10867         40 HSMCLLGNDYVLGVEKGKPMIQAWPVNSQEK-AQLRLICPGRISSMQASPDAAYIAVS-IETKLHMWQISSGRLLATASS  117 (343)
Q Consensus        40 ~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~-~~~~~~~~~~v~~~~~s~~~~~l~~~-~d~~i~v~~~~~~~~~~~~~~  117 (343)
                      ..++..-.+..++.|++.|.+-..|....-. ...-....++|++++|+.+|++++.| .+|.|.+||...+..++.+..
T Consensus        91 ~v~s~a~~~~~ivi~Ts~ghvl~~d~~~nL~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e  170 (1206)
T KOG2079|consen   91 GVISSAIVVVPIVIGTSHGHVLLSDMTGNLGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITE  170 (1206)
T ss_pred             ceeeeeeeeeeEEEEcCchhhhhhhhhcccchhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeeee
Confidence            3333333456677777778998888776422 12222446789999999999999986 689999999999999888887


Q ss_pred             cCCCeEEEEE---ecCCCEEEEecCCCeEEEeecC
Q psy10867        118 HYQPITIVKW---SADSNFIVTGGEDGTICVWQLS  149 (343)
Q Consensus       118 ~~~~v~~~~~---~~~~~~l~s~~~dg~i~iwd~~  149 (343)
                      |..+.+.+-+   ..++..++++...|.  +|.+.
T Consensus       171 ~~ap~t~vi~v~~t~~nS~llt~D~~Gs--f~~lv  203 (1206)
T KOG2079|consen  171 HGAPVTGVIFVGRTSQNSKLLTSDTGGS--FWKLV  203 (1206)
T ss_pred             cCCccceEEEEEEeCCCcEEEEccCCCc--eEEEE
Confidence            7766655544   345567888877776  56543

>KOG4499|consensus

Probab=97.70  E-value=0.011  Score=44.29  Aligned_cols=143  Identities=10%  Similarity=0.041  Sum_probs=82.9

Q ss_pred             ccceEEEEeecCCCceEEEEeeCC---------CeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEE-EcCCCcEEE
Q psy10867        183 SLPVTHVTLSKLGAKSRVASVSHD---------RTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYM-GTSEGVIKS  252 (343)
Q Consensus       183 ~~~v~~~~~~~~~~~~~l~~~~~d---------~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~-~~~d~~i~i  252 (343)
                      ..+.+.-..+|+|  ++++-...|         |.++.|-. .++....+..-.--+.++|+.+.+.++. -+.+-.|.-
T Consensus       108 knR~NDgkvdP~G--ryy~GtMad~~~~le~~~g~Ly~~~~-~h~v~~i~~~v~IsNgl~Wd~d~K~fY~iDsln~~V~a  184 (310)
T KOG4499|consen  108 KNRLNDGKVDPDG--RYYGGTMADFGDDLEPIGGELYSWLA-GHQVELIWNCVGISNGLAWDSDAKKFYYIDSLNYEVDA  184 (310)
T ss_pred             hcccccCccCCCC--ceeeeeeccccccccccccEEEEecc-CCCceeeehhccCCccccccccCcEEEEEccCceEEee
Confidence            4556677788998  553322222         34444432 1222111122223456788888776655 455667777


Q ss_pred             EE--eecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc-cCCceEEEEEc
Q psy10867        253 FC--LRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVLGAFLG  329 (343)
Q Consensus       253 ~d--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~s  329 (343)
                      ||  ..++.......+-.-+....+  .....-.+++..+|++.++.-+.++|...|..+|+.+.++. ....|++++|-
T Consensus       185 ~dyd~~tG~~snr~~i~dlrk~~~~--e~~~PDGm~ID~eG~L~Va~~ng~~V~~~dp~tGK~L~eiklPt~qitsccFg  262 (310)
T KOG4499|consen  185 YDYDCPTGDLSNRKVIFDLRKSQPF--ESLEPDGMTIDTEGNLYVATFNGGTVQKVDPTTGKILLEIKLPTPQITSCCFG  262 (310)
T ss_pred             eecCCCcccccCcceeEEeccCCCc--CCCCCCcceEccCCcEEEEEecCcEEEEECCCCCcEEEEEEcCCCceEEEEec
Confidence            77  333332221110000000000  11123345667788888888888999999999999999999 88899999997


Q ss_pred             c
Q psy10867        330 L  330 (343)
Q Consensus       330 p  330 (343)
                      -
T Consensus       263 G  263 (310)
T KOG4499|consen  263 G  263 (310)
T ss_pred             C
Confidence            4

>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase

Probab=97.67  E-value=0.019  Score=46.00  Aligned_cols=228  Identities=14%  Similarity=0.134  Sum_probs=127.8

Q ss_pred             eEEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCccccee------------
Q psy10867          6 EVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQL------------   73 (343)
Q Consensus         6 ~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~------------   73 (343)
                      ..++-+..+| |.+++.........+....  .|..+...|+-.++.+-++ +.+.++++........            
T Consensus         8 ~~L~vGt~~G-l~~~~~~~~~~~~~i~~~~--~I~ql~vl~~~~~llvLsd-~~l~~~~L~~l~~~~~~~~~~~~~~~~~   83 (275)
T PF00780_consen    8 DRLLVGTEDG-LYVYDLSDPSKPTRILKLS--SITQLSVLPELNLLLVLSD-GQLYVYDLDSLEPVSTSAPLAFPKSRSL   83 (275)
T ss_pred             CEEEEEECCC-EEEEEecCCccceeEeecc--eEEEEEEecccCEEEEEcC-CccEEEEchhhccccccccccccccccc
Confidence            4456666677 8999983332222222222  5888998887666666555 8999999876544431            


Q ss_pred             --cccCCcceEEEE---ECCCCCEEEEecCCeEEEEEccCC-----ceEEEecccCCCeEEEEEecCCCEEEEecCCCeE
Q psy10867         74 --RLICPGRISSMQ---ASPDAAYIAVSIETKLHMWQISSG-----RLLATASSHYQPITIVKWSADSNFIVTGGEDGTI  143 (343)
Q Consensus        74 --~~~~~~~v~~~~---~s~~~~~l~~~~d~~i~v~~~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i  143 (343)
                        .......+...+   -......|++.....|.+|.....     +..+.+. -...+.+++|.  ++.++.|.. ...
T Consensus        84 ~~~~~~~~~v~~f~~~~~~~~~~~L~va~kk~i~i~~~~~~~~~f~~~~ke~~-lp~~~~~i~~~--~~~i~v~~~-~~f  159 (275)
T PF00780_consen   84 PTKLPETKGVSFFAVNGGHEGSRRLCVAVKKKILIYEWNDPRNSFSKLLKEIS-LPDPPSSIAFL--GNKICVGTS-KGF  159 (275)
T ss_pred             cccccccCCeeEEeeccccccceEEEEEECCEEEEEEEECCcccccceeEEEE-cCCCcEEEEEe--CCEEEEEeC-Cce
Confidence              112223444444   122445677777779999988653     2344443 34678899998  566777765 458


Q ss_pred             EEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEE--
Q psy10867        144 CVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLL--  221 (343)
Q Consensus       144 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~--  221 (343)
                      .+.|+.++....-.......          ...........++..+.... +  .+|++-  +..-.+.|. .|+..+  
T Consensus       160 ~~idl~~~~~~~l~~~~~~~----------~~~~~~~~~~~~~~~~~~~~-~--e~Ll~~--~~~g~fv~~-~G~~~r~~  223 (275)
T PF00780_consen  160 YLIDLNTGSPSELLDPSDSS----------SSFKSRNSSSKPLGIFQLSD-N--EFLLCY--DNIGVFVNK-NGEPSRKS  223 (275)
T ss_pred             EEEecCCCCceEEeCccCCc----------chhhhcccCCCceEEEEeCC-c--eEEEEe--cceEEEEcC-CCCcCccc
Confidence            88898866443222110000          00001111223343444433 3  455542  333344453 454433  


Q ss_pred             EeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccc
Q psy10867        222 SLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPR  260 (343)
Q Consensus       222 ~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~  260 (343)
                      .+.-...+.++++.  ..+|++-+. +.|.||++.+.+.
T Consensus       224 ~i~W~~~p~~~~~~--~pyli~~~~-~~iEV~~~~~~~l  259 (275)
T PF00780_consen  224 TIQWSSAPQSVAYS--SPYLIAFSS-NSIEVRSLETGEL  259 (275)
T ss_pred             EEEcCCchhEEEEE--CCEEEEECC-CEEEEEECcCCcE
Confidence            34445566677774  457777665 5599999988644

These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity

>PHA02713 hypothetical protein; Provisional

Probab=97.66  E-value=0.0096  Score=52.77  Aligned_cols=218  Identities=9%  Similarity=-0.024  Sum_probs=103.1

Q ss_pred             eEEEEeCCCcccceecccCCcc-eEEEEECCCCCEEEE-ecC------CeEEEEEccCCceEEE--ecccCCCeEEEEEe
Q psy10867         59 MIQAWPVNSQEKAQLRLICPGR-ISSMQASPDAAYIAV-SIE------TKLHMWQISSGRLLAT--ASSHYQPITIVKWS  128 (343)
Q Consensus        59 ~i~iw~~~~~~~~~~~~~~~~~-v~~~~~s~~~~~l~~-~~d------~~i~v~~~~~~~~~~~--~~~~~~~v~~~~~~  128 (343)
                      .+..||..+++......-.... -.+++.. ++.+.+. |.+      ..+..||+.+..-...  +....... +++ .
T Consensus       273 ~v~~yd~~~~~W~~l~~mp~~r~~~~~a~l-~~~IYviGG~~~~~~~~~~v~~Yd~~~n~W~~~~~m~~~R~~~-~~~-~  349 (557)
T PHA02713        273 CILVYNINTMEYSVISTIPNHIINYASAIV-DNEIIIAGGYNFNNPSLNKVYKINIENKIHVELPPMIKNRCRF-SLA-V  349 (557)
T ss_pred             CEEEEeCCCCeEEECCCCCccccceEEEEE-CCEEEEEcCCCCCCCccceEEEEECCCCeEeeCCCCcchhhce-eEE-E
Confidence            4677888776544221111111 1222322 5555554 432      3578899877653221  11111111 222 2


Q ss_pred             cCCCEEEEecCCC-----eEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEe
Q psy10867        129 ADSNFIVTGGEDG-----TICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASV  203 (343)
Q Consensus       129 ~~~~~l~s~~~dg-----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~  203 (343)
                      -+++..+.|+.++     .+..||..+..-.                    .+..+.........+.  -++  .+.+.|
T Consensus       350 ~~g~IYviGG~~~~~~~~sve~Ydp~~~~W~--------------------~~~~mp~~r~~~~~~~--~~g--~IYviG  405 (557)
T PHA02713        350 IDDTIYAIGGQNGTNVERTIECYTMGDDKWK--------------------MLPDMPIALSSYGMCV--LDQ--YIYIIG  405 (557)
T ss_pred             ECCEEEEECCcCCCCCCceEEEEECCCCeEE--------------------ECCCCCcccccccEEE--ECC--EEEEEe
Confidence            3677778888754     3777887764211                    1111111111111112  234  666667


Q ss_pred             eCC-----------------------CeEEEEecCCCceEEEeec-CCcEEEEEEcCCCCEEEEEcCCC------cEEEE
Q psy10867        204 SHD-----------------------RTCKIFDLCTGEDLLSLIL-DTRLTCVAFDGTEDNIYMGTSEG------VIKSF  253 (343)
Q Consensus       204 ~~d-----------------------~~i~~wd~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~d~------~i~i~  253 (343)
                      +.+                       ..+..||.++.+-...-.. ......-+..-+++..++|+.++      .+..|
T Consensus       406 G~~~~~~~~~~~~~~~~~~~~~~~~~~~ve~YDP~td~W~~v~~m~~~r~~~~~~~~~~~IYv~GG~~~~~~~~~~ve~Y  485 (557)
T PHA02713        406 GRTEHIDYTSVHHMNSIDMEEDTHSSNKVIRYDTVNNIWETLPNFWTGTIRPGVVSHKDDIYVVCDIKDEKNVKTCIFRY  485 (557)
T ss_pred             CCCcccccccccccccccccccccccceEEEECCCCCeEeecCCCCcccccCcEEEECCEEEEEeCCCCCCccceeEEEe
Confidence            654                       2467788776543211111 11111111222456666666542      35667


Q ss_pred             Eeec-ccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCC--cEEEEecccceee
Q psy10867        254 CLRQ-VPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADE--TLKIWHTISRQCL  314 (343)
Q Consensus       254 d~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg--~i~iwd~~~~~~~  314 (343)
                      |..+ ..         ...+..+.........+.+  ++++.+.|+.|+  .+-.||..+.+-.
T Consensus       486 dp~~~~~---------W~~~~~m~~~r~~~~~~~~--~~~iyv~Gg~~~~~~~e~yd~~~~~W~  538 (557)
T PHA02713        486 NTNTYNG---------WELITTTESRLSALHTILH--DNTIMMLHCYESYMLQDTFNVYTYEWN  538 (557)
T ss_pred             cCCCCCC---------eeEccccCcccccceeEEE--CCEEEEEeeecceeehhhcCccccccc
Confidence            7654 11         1112233322222323332  778889999888  7778888776543

>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A

Probab=97.66  E-value=0.02  Score=45.98  Aligned_cols=156  Identities=16%  Similarity=0.187  Sum_probs=79.7

Q ss_pred             ccCCcceEEEEECCCCCEEEEecCCeEE-EEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccce
Q psy10867         75 LICPGRISSMQASPDAAYIAVSIETKLH-MWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLIC  153 (343)
Q Consensus        75 ~~~~~~v~~~~~s~~~~~l~~~~d~~i~-v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~  153 (343)
                      ....+.+..+.-++||++++++..|.+. -||.-...-...-+.-...|..|.|.|++.+.+.+ ..|.|+.=+......
T Consensus       141 ~~~~gs~~~~~r~~dG~~vavs~~G~~~~s~~~G~~~w~~~~r~~~~riq~~gf~~~~~lw~~~-~Gg~~~~s~~~~~~~  219 (302)
T PF14870_consen  141 SETSGSINDITRSSDGRYVAVSSRGNFYSSWDPGQTTWQPHNRNSSRRIQSMGFSPDGNLWMLA-RGGQIQFSDDPDDGE  219 (302)
T ss_dssp             -S----EEEEEE-TTS-EEEEETTSSEEEEE-TT-SS-EEEE--SSS-EEEEEE-TTS-EEEEE-TTTEEEEEE-TTEEE
T ss_pred             cCCcceeEeEEECCCCcEEEEECcccEEEEecCCCccceEEccCccceehhceecCCCCEEEEe-CCcEEEEccCCCCcc
Confidence            3455778899999999999998877654 66643322222233346789999999998766654 788888877222111


Q ss_pred             eeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee----cCCcE
Q psy10867        154 KQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI----LDTRL  229 (343)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~----~~~~i  229 (343)
                      .  ..               ++........-.+..+++.+++  ...++|+ .|.+. ...+.|+.-....    .+..+
T Consensus       220 ~--w~---------------~~~~~~~~~~~~~ld~a~~~~~--~~wa~gg-~G~l~-~S~DgGktW~~~~~~~~~~~n~  278 (302)
T PF14870_consen  220 T--WS---------------EPIIPIKTNGYGILDLAYRPPN--EIWAVGG-SGTLL-VSTDGGKTWQKDRVGENVPSNL  278 (302)
T ss_dssp             E--E------------------B-TTSS--S-EEEEEESSSS---EEEEES-TT-EE-EESSTTSS-EE-GGGTTSSS--
T ss_pred             c--cc---------------cccCCcccCceeeEEEEecCCC--CEEEEeC-CccEE-EeCCCCccceECccccCCCCce
Confidence            1  00               1111112233457889999887  5666554 44433 3445666554443    25568


Q ss_pred             EEEEEcCCCCEEEEEcCCCcEEEE
Q psy10867        230 TCVAFDGTEDNIYMGTSEGVIKSF  253 (343)
Q Consensus       230 ~~~~~~~~~~~l~~~~~d~~i~i~  253 (343)
                      ..+.|.++.+-++.| .+|.|.-|
T Consensus       279 ~~i~f~~~~~gf~lG-~~G~ll~~  301 (302)
T PF14870_consen  279 YRIVFVNPDKGFVLG-QDGVLLRY  301 (302)
T ss_dssp             -EEEEEETTEEEEE--STTEEEEE
T ss_pred             EEEEEcCCCceEEEC-CCcEEEEe
Confidence            899998765555554 67776554

>KOG2280|consensus

Probab=97.65  E-value=0.022  Score=50.16  Aligned_cols=180  Identities=13%  Similarity=0.160  Sum_probs=94.0

Q ss_pred             CeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEEecCCeEEEEEccCCceEEE--e--cccCCCeEEEEEecCCCE
Q psy10867         58 PMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLAT--A--SSHYQPITIVKWSADSNF  133 (343)
Q Consensus        58 ~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~~--~--~~~~~~v~~~~~~~~~~~  133 (343)
                      ..|+||+.......+..-.|. .+-.+.|+.+..+|+...+|++++|++- |+.+..  .  ......|..+.+..+|-.
T Consensus        64 ~~I~If~~sG~lL~~~~w~~~-~lI~mgWs~~eeLI~v~k~g~v~Vy~~~-ge~ie~~svg~e~~~~~I~ec~~f~~GVa  141 (829)
T KOG2280|consen   64 PYIRIFNISGQLLGRILWKHG-ELIGMGWSDDEELICVQKDGTVHVYGLL-GEFIESNSVGFESQMSDIVECRFFHNGVA  141 (829)
T ss_pred             eeEEEEeccccchHHHHhcCC-CeeeecccCCceEEEEeccceEEEeecc-hhhhcccccccccccCceeEEEEecCceE
Confidence            468899876443334333443 8889999999999999999999999975 333332  1  222344666666556644


Q ss_pred             EEEecCCCeEE-EeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCc-eEEEEee-CCCeEE
Q psy10867        134 IVTGGEDGTIC-VWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAK-SRVASVS-HDRTCK  210 (343)
Q Consensus       134 l~s~~~dg~i~-iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~l~~~~-~d~~i~  210 (343)
                      +++.  +|.+. +-+...... ..+.                   .......+-.|-...+++.. ..++-.. ..+ ..
T Consensus       142 vlt~--~g~v~~i~~~~~~~~-~~~~-------------------diP~~~~~~~~Wt~~~~~~~~~~ll~v~~~v~-~~  198 (829)
T KOG2280|consen  142 VLTV--SGQVILINGVEEPKL-RKMP-------------------DIPYNELPKSCWTVFQPHRQSTILLDVDVAVG-LH  198 (829)
T ss_pred             EEec--CCcEEEEcCCCcchh-hhCC-------------------CCCCccCCCcceeEecCCCcceeEEeechhhh-hc
Confidence            4433  34443 333333211 1110                   00011111122222222110 1111111 011 01


Q ss_pred             EEecCCCc-eEEEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccc
Q psy10867        211 IFDLCTGE-DLLSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTR  262 (343)
Q Consensus       211 ~wd~~~~~-~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~  262 (343)
                      ++-..... ....+. ..+.+..+..||+.++|+.-+..|.|.+-+........
T Consensus       199 ~~q~~~~~~q~~~~~~~~~~~~ki~VS~n~~~laLyt~~G~i~~vs~D~~~~lc  252 (829)
T KOG2280|consen  199 ICQVEESRVQLHALSWPNSSVVKISVSPNRRFLALYTETGKIWVVSIDLSQILC  252 (829)
T ss_pred             ccceecccccccccCCCCceEEEEEEcCCcceEEEEecCCcEEEEecchhhhhh
Confidence            11111111 111222 24678899999999999999999999998877654433

>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=97.62  E-value=0.019  Score=44.75  Aligned_cols=199  Identities=13%  Similarity=0.152  Sum_probs=118.7

Q ss_pred             EecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecc-cCCcceEEEEECCCCCEEEEe-cCCeEEEEEccC
Q psy10867         31 YKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRL-ICPGRISSMQASPDAAYIAVS-IETKLHMWQISS  108 (343)
Q Consensus        31 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~-~d~~i~v~~~~~  108 (343)
                      +.+... .+.++.|+|+.+.+.+-.+...-.++=...|+.+.... ..-.....+.+..++++.++. .++.+.++.+..
T Consensus        81 i~g~~~-nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiPL~g~~DpE~Ieyig~n~fvi~dER~~~l~~~~vd~  159 (316)
T COG3204          81 ILGETA-NVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPLTGFSDPETIEYIGGNQFVIVDERDRALYLFTVDA  159 (316)
T ss_pred             cccccc-cccceeeCCCcceEEEecCCCceEEEEecCCceEEEecccccCChhHeEEecCCEEEEEehhcceEEEEEEcC
Confidence            344455 68999999998766666665666677666677765433 222334567787788888874 578888888776


Q ss_pred             CceEEEe-------c--cc-CCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeee
Q psy10867        109 GRLLATA-------S--SH-YQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHV  178 (343)
Q Consensus       109 ~~~~~~~-------~--~~-~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (343)
                      +..+..+       .  .+ +...-.++|.|..+.|+.+-+-.-+.|+.+......-...            ....+...
T Consensus       160 ~t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~~~~~~l~~~------------~~~~~~~~  227 (316)
T COG3204         160 DTTVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVTQSPSSLSVH------------ASLDPTAD  227 (316)
T ss_pred             CccEEeccceEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEecCCcccccc------------cccCcccc
Confidence            5322211       1  12 4567899999988888888877778887776322111000            00001111


Q ss_pred             ecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecC----------CcEEEEEEcCCCCEEEEE
Q psy10867        179 KSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILD----------TRLTCVAFDGTEDNIYMG  244 (343)
Q Consensus       179 ~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~----------~~i~~~~~~~~~~~l~~~  244 (343)
                      ..-.-..|.++.|++..+ .+++.+.+++.+.-.|. .|+.+..+...          .....++..++|...+++
T Consensus       228 ~~~f~~DvSgl~~~~~~~-~LLVLS~ESr~l~Evd~-~G~~~~~lsL~~g~~gL~~dipqaEGiamDd~g~lYIvS  301 (316)
T COG3204         228 RDLFVLDVSGLEFNAITN-SLLVLSDESRRLLEVDL-SGEVIELLSLTKGNHGLSSDIPQAEGIAMDDDGNLYIVS  301 (316)
T ss_pred             cceEeeccccceecCCCC-cEEEEecCCceEEEEec-CCCeeeeEEeccCCCCCcccCCCcceeEECCCCCEEEEe
Confidence            011123567788887654 67777888888888885 45544443311          124456666665544443

>KOG4441|consensus

Probab=97.57  E-value=0.03  Score=49.70  Aligned_cols=227  Identities=11%  Similarity=0.082  Sum_probs=115.4

Q ss_pred             CceEEEEEcCC------CeEEEEeCCCcccceecc-cCCcceEEEEECCCCCEEEEecC------CeEEEEEccCCceEE
Q psy10867         47 NDYVLGVEKGK------PMIQAWPVNSQEKAQLRL-ICPGRISSMQASPDAAYIAVSIE------TKLHMWQISSGRLLA  113 (343)
Q Consensus        47 ~~~~~~~~~~~------~~i~iw~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~d------~~i~v~~~~~~~~~~  113 (343)
                      .+.+++.|+.+      ..+..||..+++...... .....-.+++...+--++++|.+      ..+..||..+++-..
T Consensus       284 ~~~l~~vGG~~~~~~~~~~ve~yd~~~~~w~~~a~m~~~r~~~~~~~~~~~lYv~GG~~~~~~~l~~ve~YD~~~~~W~~  363 (571)
T KOG4441|consen  284 SGKLVAVGGYNRQGQSLRSVECYDPKTNEWSSLAPMPSPRCRVGVAVLNGKLYVVGGYDSGSDRLSSVERYDPRTNQWTP  363 (571)
T ss_pred             CCeEEEECCCCCCCcccceeEEecCCcCcEeecCCCCcccccccEEEECCEEEEEccccCCCcccceEEEecCCCCceec
Confidence            34555555543      367888988875543222 22233445555534334444666      368899988776443


Q ss_pred             E--ecccCCCeEEEEEecCCCEEEEecCCCe-----EEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccce
Q psy10867        114 T--ASSHYQPITIVKWSADSNFIVTGGEDGT-----ICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPV  186 (343)
Q Consensus       114 ~--~~~~~~~v~~~~~~~~~~~l~s~~~dg~-----i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  186 (343)
                      .  +........ ++. -+|...++|+.||.     +..||..+.+-                    .....   .....
T Consensus       364 ~a~M~~~R~~~~-v~~-l~g~iYavGG~dg~~~l~svE~YDp~~~~W--------------------~~va~---m~~~r  418 (571)
T KOG4441|consen  364 VAPMNTKRSDFG-VAV-LDGKLYAVGGFDGEKSLNSVECYDPVTNKW--------------------TPVAP---MLTRR  418 (571)
T ss_pred             cCCccCccccce-eEE-ECCEEEEEeccccccccccEEEecCCCCcc--------------------cccCC---CCcce
Confidence            2  211222121 221 26888899998865     66677666421                    12111   11122


Q ss_pred             EEEEee-cCCCceEEEEeeCC------CeEEEEecCCCceEEEeec--CCcEEEEEEcCCCCEEEEEcCCCc-----EEE
Q psy10867        187 THVTLS-KLGAKSRVASVSHD------RTCKIFDLCTGEDLLSLIL--DTRLTCVAFDGTEDNIYMGTSEGV-----IKS  252 (343)
Q Consensus       187 ~~~~~~-~~~~~~~l~~~~~d------~~i~~wd~~~~~~~~~~~~--~~~i~~~~~~~~~~~l~~~~~d~~-----i~i  252 (343)
                      ...... -++  .+.+.|+.+      ..+..||..+.+-...-..  ...-..++ .-++...++|+.|+.     |..
T Consensus       419 ~~~gv~~~~g--~iYi~GG~~~~~~~l~sve~YDP~t~~W~~~~~M~~~R~~~g~a-~~~~~iYvvGG~~~~~~~~~VE~  495 (571)
T KOG4441|consen  419 SGHGVAVLGG--KLYIIGGGDGSSNCLNSVECYDPETNTWTLIAPMNTRRSGFGVA-VLNGKIYVVGGFDGTSALSSVER  495 (571)
T ss_pred             eeeEEEEECC--EEEEEcCcCCCccccceEEEEcCCCCceeecCCcccccccceEE-EECCEEEEECCccCCCccceEEE
Confidence            222222 234  677777755      3567888877654332221  11111122 224667777777763     555


Q ss_pred             EEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCC-----cEEEEecccce
Q psy10867        253 FCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADE-----TLKIWHTISRQ  312 (343)
Q Consensus       253 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg-----~i~iwd~~~~~  312 (343)
                      ||..+..         ...+..+......+....  -++...+.|+.||     +|..||..+.+
T Consensus       496 ydp~~~~---------W~~v~~m~~~rs~~g~~~--~~~~ly~vGG~~~~~~l~~ve~ydp~~d~  549 (571)
T KOG4441|consen  496 YDPETNQ---------WTMVAPMTSPRSAVGVVV--LGGKLYAVGGFDGNNNLNTVECYDPETDT  549 (571)
T ss_pred             EcCCCCc---------eeEcccCccccccccEEE--ECCEEEEEecccCccccceeEEcCCCCCc
Confidence            6655422         111222322233332222  2567778888876     56777766554

>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []

Probab=97.54  E-value=0.03  Score=49.94  Aligned_cols=117  Identities=9%  Similarity=0.102  Sum_probs=82.7

Q ss_pred             cceEEEEeecCCCceEEEEeeCCCeEEEEecCC-------C-------------ceEEEeecCCcEEEEEEc--CCCCEE
Q psy10867        184 LPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCT-------G-------------EDLLSLILDTRLTCVAFD--GTEDNI  241 (343)
Q Consensus       184 ~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~-------~-------------~~~~~~~~~~~i~~~~~~--~~~~~l  241 (343)
                      ..|+.|.+..-+....|+.+..||.|.+|.+++       .             ++...+..+...+.++++  ...++|
T Consensus       101 HtIN~i~v~~lg~~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~v~~SaWGLdIh~~~~~rlI  180 (717)
T PF08728_consen  101 HTINFIKVGDLGGEEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLRVGASAWGLDIHDYKKSRLI  180 (717)
T ss_pred             ceeeEEEecccCCeeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEeecCCceeEEEEEecCcceEE
Confidence            457777776666658999999999999996631       0             122333456789999999  888999


Q ss_pred             EEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCC---C---EEEEEeCCCcEEEEec
Q psy10867        242 YMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITG---I---TLLSSSADETLKIWHT  308 (343)
Q Consensus       242 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~---~---~l~s~~~dg~i~iwd~  308 (343)
                      |+++....|.+|-+.........       . .-..|...|-+++|-++.   .   .|++++-.|.+.+|++
T Consensus       181 AVSsNs~~VTVFaf~l~~~r~~~-------~-~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I  245 (717)
T PF08728_consen  181 AVSSNSQEVTVFAFALVDERFYH-------V-PSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI  245 (717)
T ss_pred             EEecCCceEEEEEEecccccccc-------c-cccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence            99999999999877653211110       0 011256678888886643   2   7888999999999888

RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].

>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family

Probab=97.45  E-value=0.09  Score=48.25  Aligned_cols=112  Identities=5%  Similarity=0.062  Sum_probs=69.5

Q ss_pred             cceEEEecCCCCeEEEEecCCceEEEEEecCCCC-------cceEEEEeC----------------CceEEEEEcCCCeE
Q psy10867          4 LNEVAFSYDGSGAISVWEPKGGTLLMSYKGASVL-------SPHSMCLLG----------------NDYVLGVEKGKPMI   60 (343)
Q Consensus         4 v~~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~-------~v~~~~~~~----------------~~~~~~~~~~~~~i   60 (343)
                      +...+|.++.++.|.-.|..+|+.+.++......       ..+.+++..                .+..+..+..|+.+
T Consensus       193 vgg~lYv~t~~~~V~ALDa~TGk~lW~~d~~~~~~~~~~~~~cRGvay~~~p~~~~~~~~~~~p~~~~~rV~~~T~Dg~L  272 (764)
T TIGR03074       193 VGDTLYLCTPHNKVIALDAATGKEKWKFDPKLKTEAGRQHQTCRGVSYYDAPAAAAGPAAPAAPADCARRIILPTSDARL  272 (764)
T ss_pred             ECCEEEEECCCCeEEEEECCCCcEEEEEcCCCCcccccccccccceEEecCCcccccccccccccccCCEEEEecCCCeE
Confidence            4567888888999999999999999887654321       122233321                12244445556889


Q ss_pred             EEEeCCCcccceecccCCcceE-------------EEEECC---CCCEEEEec----------CCeEEEEEccCCceEEE
Q psy10867         61 QAWPVNSQEKAQLRLICPGRIS-------------SMQASP---DAAYIAVSI----------ETKLHMWQISSGRLLAT  114 (343)
Q Consensus        61 ~iw~~~~~~~~~~~~~~~~~v~-------------~~~~s~---~~~~l~~~~----------d~~i~v~~~~~~~~~~~  114 (343)
                      .-.|.++++....+. ..+.|.             .+.-.|   ++..++.+.          +|.|+-+|.++|+++-.
T Consensus       273 iALDA~TGk~~W~fg-~~G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~I~A~Da~TGkl~W~  351 (764)
T TIGR03074       273 IALDADTGKLCEDFG-NNGTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGVIRAFDVNTGALVWA  351 (764)
T ss_pred             EEEECCCCCEEEEec-CCCceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccCCCcEEEEEECCCCcEeeE
Confidence            889999888764331 111110             111122   445555421          57899999999998876


Q ss_pred             ec
Q psy10867        115 AS  116 (343)
Q Consensus       115 ~~  116 (343)
                      +.
T Consensus       352 ~~  353 (764)
T TIGR03074       352 WD  353 (764)
T ss_pred             Ee
Confidence            54

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.

>KOG4499|consensus

Probab=97.44  E-value=0.029  Score=42.27  Aligned_cols=145  Identities=17%  Similarity=0.223  Sum_probs=86.9

Q ss_pred             CcceEEEEECCCCCEEEEec--C--------CeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEE-EecCCCeEEEe
Q psy10867         78 PGRISSMQASPDAAYIAVSI--E--------TKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIV-TGGEDGTICVW  146 (343)
Q Consensus        78 ~~~v~~~~~s~~~~~l~~~~--d--------~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-s~~~dg~i~iw  146 (343)
                      ..+.+.-..+|+|++.+...  .        |.++.|-..  ..+..+...-+--..++|+.+.+.+. +-+.+-+|.-|
T Consensus       108 knR~NDgkvdP~Gryy~GtMad~~~~le~~~g~Ly~~~~~--h~v~~i~~~v~IsNgl~Wd~d~K~fY~iDsln~~V~a~  185 (310)
T KOG4499|consen  108 KNRLNDGKVDPDGRYYGGTMADFGDDLEPIGGELYSWLAG--HQVELIWNCVGISNGLAWDSDAKKFYYIDSLNYEVDAY  185 (310)
T ss_pred             hcccccCccCCCCceeeeeeccccccccccccEEEEeccC--CCceeeehhccCCccccccccCcEEEEEccCceEEeee
Confidence            34567777899999987632  1        334444432  22222222233345788987776554 45567788778


Q ss_pred             e--cCccceeeeeecCCCCCCCCccccccceeeeecc----cccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceE
Q psy10867        147 Q--LSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQ----HSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDL  220 (343)
Q Consensus       147 d--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~  220 (343)
                      |  ..++.....                 +.+..++.    .....-.+++..+|  ++.++.-..++|...|..+|+.+
T Consensus       186 dyd~~tG~~snr-----------------~~i~dlrk~~~~e~~~PDGm~ID~eG--~L~Va~~ng~~V~~~dp~tGK~L  246 (310)
T KOG4499|consen  186 DYDCPTGDLSNR-----------------KVIFDLRKSQPFESLEPDGMTIDTEG--NLYVATFNGGTVQKVDPTTGKIL  246 (310)
T ss_pred             ecCCCcccccCc-----------------ceeEEeccCCCcCCCCCCcceEccCC--cEEEEEecCcEEEEECCCCCcEE
Confidence            7  555432211                 01111111    11223345555566  78888888999999999999999


Q ss_pred             EEeec-CCcEEEEEEcCC-CCEEEE
Q psy10867        221 LSLIL-DTRLTCVAFDGT-EDNIYM  243 (343)
Q Consensus       221 ~~~~~-~~~i~~~~~~~~-~~~l~~  243 (343)
                      .++.. ...++++||--. -..+++
T Consensus       247 ~eiklPt~qitsccFgGkn~d~~yv  271 (310)
T KOG4499|consen  247 LEIKLPTPQITSCCFGGKNLDILYV  271 (310)
T ss_pred             EEEEcCCCceEEEEecCCCccEEEE
Confidence            99985 456999999643 234444

>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=97.42  E-value=0.037  Score=43.24  Aligned_cols=197  Identities=12%  Similarity=0.061  Sum_probs=121.6

Q ss_pred             cccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCC
Q psy10867        116 SSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLG  195 (343)
Q Consensus       116 ~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  195 (343)
                      .+-...+.++.|+|+.+.|++......-.++=-.++..++++++.                    + -.....+.+..++
T Consensus        82 ~g~~~nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiPL~--------------------g-~~DpE~Ieyig~n  140 (316)
T COG3204          82 LGETANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPLT--------------------G-FSDPETIEYIGGN  140 (316)
T ss_pred             ccccccccceeeCCCcceEEEecCCCceEEEEecCCceEEEeccc--------------------c-cCChhHeEEecCC
Confidence            344556999999999999998888777777766677766665311                    1 2234457777777


Q ss_pred             CceEEEEeeCCCeEEEEecCCCceEEE-----ee-----c-CCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccc
Q psy10867        196 AKSRVASVSHDRTCKIFDLCTGEDLLS-----LI-----L-DTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDH  264 (343)
Q Consensus       196 ~~~~l~~~~~d~~i~~wd~~~~~~~~~-----~~-----~-~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~  264 (343)
                        +++++--.++.+.++.+........     +.     . +.....++|+|....|+++-.-.=+.||...........
T Consensus       141 --~fvi~dER~~~l~~~~vd~~t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~~~~~~l~~  218 (316)
T COG3204         141 --QFVIVDERDRALYLFTVDADTTVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVTQSPSSLSV  218 (316)
T ss_pred             --EEEEEehhcceEEEEEEcCCccEEeccceEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEecCCccccc
Confidence              6777777788888887765532221     11     2 456889999999999999988888888877744322221


Q ss_pred             cccCCCCCCccccccCcEEEEEEccC-CCEEEEEeCCCcEEEEecccceeeeecc-c---------CCceEEEEEccCCC
Q psy10867        265 HIQDSTSNPDFIGHEKQVTSLSCSIT-GITLLSSSADETLKIWHTISRQCLRTIQ-H---------KGPVLGAFLGLLPP  333 (343)
Q Consensus       265 ~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~---------~~~v~~~~~sp~~~  333 (343)
                      +.... +.....-.-..|.++.|++. +.+|+-+.+++.+.-.|. .|+.+..+. +         -...-.++..++|.
T Consensus       219 ~~~~~-~~~~~~~f~~DvSgl~~~~~~~~LLVLS~ESr~l~Evd~-~G~~~~~lsL~~g~~gL~~dipqaEGiamDd~g~  296 (316)
T COG3204         219 HASLD-PTADRDLFVLDVSGLEFNAITNSLLVLSDESRRLLEVDL-SGEVIELLSLTKGNHGLSSDIPQAEGIAMDDDGN  296 (316)
T ss_pred             ccccC-cccccceEeeccccceecCCCCcEEEEecCCceEEEEec-CCCeeeeEEeccCCCCCcccCCCcceeEECCCCC
Confidence            11000 00000001234677888874 456666777777777775 454444432 1         11234567777666


Q ss_pred             eeee
Q psy10867        334 AIHD  337 (343)
Q Consensus       334 ~l~~  337 (343)
                      .-++
T Consensus       297 lYIv  300 (316)
T COG3204         297 LYIV  300 (316)
T ss_pred             EEEE
Confidence            5443

>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain

Probab=97.41  E-value=0.00069  Score=37.09  Aligned_cols=35  Identities=14%  Similarity=0.150  Sum_probs=30.7

Q ss_pred             cCcEEEEEEccCCCEEEEEeCCCcEEEEecccceee
Q psy10867        279 EKQVTSLSCSITGITLLSSSADETLKIWHTISRQCL  314 (343)
Q Consensus       279 ~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~  314 (343)
                      ...|..++|+|...+||.++.+|.|.++.+ +++.+
T Consensus        11 ~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl-~~qri   45 (47)
T PF12894_consen   11 PSRVSCMSWCPTMDLIALGTEDGEVLVYRL-NWQRI   45 (47)
T ss_pred             CCcEEEEEECCCCCEEEEEECCCeEEEEEC-CCcCc
Confidence            456999999999999999999999999998 66543

>KOG2280|consensus

Probab=97.37  E-value=0.029  Score=49.47  Aligned_cols=197  Identities=14%  Similarity=0.107  Sum_probs=103.8

Q ss_pred             CeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeee
Q psy10867         99 TKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHV  178 (343)
Q Consensus        99 ~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (343)
                      -.|+||+. +|+++..+.-..+.+-.+.|+.+ ..|++...+|++.+|++........ .                  ..
T Consensus        64 ~~I~If~~-sG~lL~~~~w~~~~lI~mgWs~~-eeLI~v~k~g~v~Vy~~~ge~ie~~-s------------------vg  122 (829)
T KOG2280|consen   64 PYIRIFNI-SGQLLGRILWKHGELIGMGWSDD-EELICVQKDGTVHVYGLLGEFIESN-S------------------VG  122 (829)
T ss_pred             eeEEEEec-cccchHHHHhcCCCeeeecccCC-ceEEEEeccceEEEeecchhhhccc-c------------------cc
Confidence            35888886 57777766655557889999865 4566778999999999876422110 0                  00


Q ss_pred             ecccccceEEEEeecCCCceEEEEeeCCCeEEEE-ecCCCceEEEeec----CCcEEEEEEcCCCC--EEEEE-c-CCCc
Q psy10867        179 KSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIF-DLCTGEDLLSLIL----DTRLTCVAFDGTED--NIYMG-T-SEGV  249 (343)
Q Consensus       179 ~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~w-d~~~~~~~~~~~~----~~~i~~~~~~~~~~--~l~~~-~-~d~~  249 (343)
                      .......|..+.+..+|    ++.-..+|.+.+- +.... .+++...    ..+-.+....+++.  .++.. . ..+ 
T Consensus       123 ~e~~~~~I~ec~~f~~G----Vavlt~~g~v~~i~~~~~~-~~~~~~diP~~~~~~~~Wt~~~~~~~~~~ll~v~~~v~-  196 (829)
T KOG2280|consen  123 FESQMSDIVECRFFHNG----VAVLTVSGQVILINGVEEP-KLRKMPDIPYNELPKSCWTVFQPHRQSTILLDVDVAVG-  196 (829)
T ss_pred             cccccCceeEEEEecCc----eEEEecCCcEEEEcCCCcc-hhhhCCCCCCccCCCcceeEecCCCcceeEEeechhhh-
Confidence            01123345555555566    3333444554443 32221 1222211    11112222222211  11110 0 000 


Q ss_pred             EEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc--cCCceEEEE
Q psy10867        250 IKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ--HKGPVLGAF  327 (343)
Q Consensus       250 i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~--~~~~v~~~~  327 (343)
                      ..++-..... .        + ...+....+.+..+..||+.++|+--..+|.|.+-+++..+++..+.  ...+...++
T Consensus       197 ~~~~q~~~~~-~--------q-~~~~~~~~~~~~ki~VS~n~~~laLyt~~G~i~~vs~D~~~~lce~~~~~~~~p~qm~  266 (829)
T KOG2280|consen  197 LHICQVEESR-V--------Q-LHALSWPNSSVVKISVSPNRRFLALYTETGKIWVVSIDLSQILCEFNCTDHDPPKQMA  266 (829)
T ss_pred             hcccceeccc-c--------c-ccccCCCCceEEEEEEcCCcceEEEEecCCcEEEEecchhhhhhccCCCCCCchHhce
Confidence            0111111100 0        0 11222224567889999999999999999999999988888777776  333334566


Q ss_pred             EccCC
Q psy10867        328 LGLLP  332 (343)
Q Consensus       328 ~sp~~  332 (343)
                      |.-+.
T Consensus       267 Wcgnd  271 (829)
T KOG2280|consen  267 WCGND  271 (829)
T ss_pred             eecCC
Confidence            65444

>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family

Probab=97.35  E-value=0.079  Score=48.58  Aligned_cols=215  Identities=8%  Similarity=-0.000  Sum_probs=112.8

Q ss_pred             CCCEEEEecCCeEEEEEccCCceEEEecccCCC--------eEEEEEec----------------CCCEEEEecCCCeEE
Q psy10867         89 DAAYIAVSIETKLHMWQISSGRLLATASSHYQP--------ITIVKWSA----------------DSNFIVTGGEDGTIC  144 (343)
Q Consensus        89 ~~~~l~~~~d~~i~v~~~~~~~~~~~~~~~~~~--------v~~~~~~~----------------~~~~l~s~~~dg~i~  144 (343)
                      ++.+.+++.++.|.-.|..+|+.+-++......        ...+.+..                .+..++.++.|+.+.
T Consensus       194 gg~lYv~t~~~~V~ALDa~TGk~lW~~d~~~~~~~~~~~~~cRGvay~~~p~~~~~~~~~~~p~~~~~rV~~~T~Dg~Li  273 (764)
T TIGR03074       194 GDTLYLCTPHNKVIALDAATGKEKWKFDPKLKTEAGRQHQTCRGVSYYDAPAAAAGPAAPAAPADCARRIILPTSDARLI  273 (764)
T ss_pred             CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCcccccccccccceEEecCCcccccccccccccccCCEEEEecCCCeEE
Confidence            566666677888999999999888776532210        12233321                234788889999999


Q ss_pred             EeecCccceeeeeecCCCCCCCCccccccceeeeeccccc---ceEEEEeecCCCceEEEEeeC----------CCeEEE
Q psy10867        145 VWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSL---PVTHVTLSKLGAKSRVASVSH----------DRTCKI  211 (343)
Q Consensus       145 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~~l~~~~~----------d~~i~~  211 (343)
                      -.|.++++....+.......          ....+.....   .+++--.--+   ..++.|+.          +|.|+-
T Consensus       274 ALDA~TGk~~W~fg~~G~vd----------l~~~~g~~~~g~~~~ts~P~V~~---g~VIvG~~v~d~~~~~~~~G~I~A  340 (764)
T TIGR03074       274 ALDADTGKLCEDFGNNGTVD----------LTAGMGTTPPGYYYPTSPPLVAG---TTVVIGGRVADNYSTDEPSGVIRA  340 (764)
T ss_pred             EEECCCCCEEEEecCCCcee----------eecccCcCCCcccccccCCEEEC---CEEEEEecccccccccCCCcEEEE
Confidence            99999998776542110000          0000000000   0011000012   24555532          688999


Q ss_pred             EecCCCceEEEeecCCc------------------E-EEEEEcCCCCEEEEEcCCCc------------------EEEEE
Q psy10867        212 FDLCTGEDLLSLILDTR------------------L-TCVAFDGTEDNIYMGTSEGV------------------IKSFC  254 (343)
Q Consensus       212 wd~~~~~~~~~~~~~~~------------------i-~~~~~~~~~~~l~~~~~d~~------------------i~i~d  254 (343)
                      +|.++|+.+..+....+                  + ...+++++...++.+..+..                  |.-.|
T Consensus       341 ~Da~TGkl~W~~~~g~p~~~~~~~~g~~~~~gg~n~W~~~s~D~~~glvy~ptGn~~pd~~g~~r~~~~n~y~~slvALD  420 (764)
T TIGR03074       341 FDVNTGALVWAWDPGNPDPTAPPAPGETYTRNTPNSWSVASYDEKLGLVYLPMGNQTPDQWGGDRTPADEKYSSSLVALD  420 (764)
T ss_pred             EECCCCcEeeEEecCCCCcccCCCCCCEeccCCCCccCceEEcCCCCeEEEeCCCccccccCCccccCcccccceEEEEe
Confidence            99999999988763110                  1 23456666666665443322                  22233


Q ss_pred             eecccccccccccCCCCCCccccccCcEEEEEEcc-CCC---EEEEEeCCCcEEEEecccceeeeecc
Q psy10867        255 LRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSI-TGI---TLLSSSADETLKIWHTISRQCLRTIQ  318 (343)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~---~l~s~~~dg~i~iwd~~~~~~~~~~~  318 (343)
                      .++++....+... ...+-.+.....++ -+.+.. +|+   .++.++.+|.+++.|.++|+.+...+
T Consensus       421 ~~TGk~~W~~Q~~-~hD~WD~D~~~~p~-L~d~~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~l~~~~  486 (764)
T TIGR03074       421 ATTGKERWVFQTV-HHDLWDMDVPAQPS-LVDLPDADGTTVPALVAPTKQGQIYVLDRRTGEPIVPVE  486 (764)
T ss_pred             CCCCceEEEeccc-CCccccccccCCce-EEeeecCCCcEeeEEEEECCCCEEEEEECCCCCEEeece
Confidence            3332221111000 00000000001111 122322 553   78899999999999999999887764

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.

>PHA02713 hypothetical protein; Provisional

Probab=97.33  E-value=0.07  Score=47.44  Aligned_cols=119  Identities=8%  Similarity=0.110  Sum_probs=55.9

Q ss_pred             eEEEEecCCceEEE--EEecCCCCcceEEEEeCCceEEEEEcCC------CeEEEEeCCCcccceecccCCcc-eEEEEE
Q psy10867         16 AISVWEPKGGTLLM--SYKGASVLSPHSMCLLGNDYVLGVEKGK------PMIQAWPVNSQEKAQLRLICPGR-ISSMQA   86 (343)
Q Consensus        16 ~i~iwd~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~~~~~------~~i~iw~~~~~~~~~~~~~~~~~-v~~~~~   86 (343)
                      .+..||..+++-..  .+....  .-.+++.. ++.+.+.|+.+      ..+..||..++.......-.... -.+++.
T Consensus       273 ~v~~yd~~~~~W~~l~~mp~~r--~~~~~a~l-~~~IYviGG~~~~~~~~~~v~~Yd~~~n~W~~~~~m~~~R~~~~~~~  349 (557)
T PHA02713        273 CILVYNINTMEYSVISTIPNHI--INYASAIV-DNEIIIAGGYNFNNPSLNKVYKINIENKIHVELPPMIKNRCRFSLAV  349 (557)
T ss_pred             CEEEEeCCCCeEEECCCCCccc--cceEEEEE-CCEEEEEcCCCCCCCccceEEEEECCCCeEeeCCCCcchhhceeEEE
Confidence            46778887654322  222111  11234443 45555554421      35778888776543221111111 112222


Q ss_pred             CCCCCEEEE-ecC-----CeEEEEEccCCceEE--EecccCCCeEEEEEecCCCEEEEecCC
Q psy10867         87 SPDAAYIAV-SIE-----TKLHMWQISSGRLLA--TASSHYQPITIVKWSADSNFIVTGGED  140 (343)
Q Consensus        87 s~~~~~l~~-~~d-----~~i~v~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~s~~~d  140 (343)
                       -+|++.+. |.+     ..+..||..+.+-..  .+.........+.  -+++..+.|+.+
T Consensus       350 -~~g~IYviGG~~~~~~~~sve~Ydp~~~~W~~~~~mp~~r~~~~~~~--~~g~IYviGG~~  408 (557)
T PHA02713        350 -IDDTIYAIGGQNGTNVERTIECYTMGDDKWKMLPDMPIALSSYGMCV--LDQYIYIIGGRT  408 (557)
T ss_pred             -ECCEEEEECCcCCCCCCceEEEEECCCCeEEECCCCCcccccccEEE--ECCEEEEEeCCC
Confidence             25666554 443     358899988764432  1211111111222  267777777765

>KOG1897|consensus

Probab=97.33  E-value=0.13  Score=47.17  Aligned_cols=121  Identities=17%  Similarity=0.172  Sum_probs=77.8

Q ss_pred             eEEEEecCCCceEEEeec--CC---cEEEEEEcCC-CCEEEEEc----------CCCcEEEEEeecccccccccccCCCC
Q psy10867        208 TCKIFDLCTGEDLLSLIL--DT---RLTCVAFDGT-EDNIYMGT----------SEGVIKSFCLRQVPRTRDHHIQDSTS  271 (343)
Q Consensus       208 ~i~~wd~~~~~~~~~~~~--~~---~i~~~~~~~~-~~~l~~~~----------~d~~i~i~d~~~~~~~~~~~~~~~~~  271 (343)
                      .++++|-.+.+.+...+.  ..   .+.++.|..| +.++++|+          ..|.|.+|.+........        
T Consensus       751 ~l~vlD~nTf~vl~~hef~~~E~~~Si~s~~~~~d~~t~~vVGT~~v~Pde~ep~~GRIivfe~~e~~~L~~--------  822 (1096)
T KOG1897|consen  751 FLRVLDQNTFEVLSSHEFERNETALSIISCKFTDDPNTYYVVGTGLVYPDENEPVNGRIIVFEFEELNSLEL--------  822 (1096)
T ss_pred             EEEEecCCceeEEeeccccccceeeeeeeeeecCCCceEEEEEEEeeccCCCCcccceEEEEEEecCCceee--------
Confidence            477888777776655543  22   3555568877 67888875          357888888776222211        


Q ss_pred             CCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc-cCCceEEEEEccCCCeeeeccc
Q psy10867        272 NPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVLGAFLGLLPPAIHDYDF  340 (343)
Q Consensus       272 ~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~  340 (343)
                      +... .-++.+.++.. -+|+++|.-  ...|++|+..+.+.++.-. +..++..+...-.|..+++|+.
T Consensus       823 v~e~-~v~Gav~aL~~-fngkllA~I--n~~vrLye~t~~~eLr~e~~~~~~~~aL~l~v~gdeI~VgDl  888 (1096)
T KOG1897|consen  823 VAET-VVKGAVYALVE-FNGKLLAGI--NQSVRLYEWTTERELRIECNISNPIIALDLQVKGDEIAVGDL  888 (1096)
T ss_pred             eeee-eeccceeehhh-hCCeEEEec--CcEEEEEEccccceehhhhcccCCeEEEEEEecCcEEEEeec
Confidence            1111 12344555542 256766654  4589999998886665544 7888889998888888888865

>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain

Probab=97.26  E-value=0.0015  Score=35.79  Aligned_cols=33  Identities=30%  Similarity=0.543  Sum_probs=29.7

Q ss_pred             ecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEee
Q psy10867        224 ILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLR  256 (343)
Q Consensus       224 ~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~  256 (343)
                      .....|..++|+|..++||.++.+|.|.++.+.
T Consensus         9 ~l~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl~   41 (47)
T PF12894_consen    9 NLPSRVSCMSWCPTMDLIALGTEDGEVLVYRLN   41 (47)
T ss_pred             CCCCcEEEEEECCCCCEEEEEECCCeEEEEECC
Confidence            356679999999999999999999999999983

>KOG4441|consensus

Probab=97.21  E-value=0.1  Score=46.40  Aligned_cols=209  Identities=11%  Similarity=0.076  Sum_probs=103.8

Q ss_pred             CeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCC-----CeEEEEeCCCcccceecccCCcce-EEEEECC
Q psy10867         15 GAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGK-----PMIQAWPVNSQEKAQLRLICPGRI-SSMQASP   88 (343)
Q Consensus        15 g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-----~~i~iw~~~~~~~~~~~~~~~~~v-~~~~~s~   88 (343)
                      ..+..+|..+++......-.....-.++++..+.-++++|.+.     ..+..||...++......-...+. ..++. -
T Consensus       301 ~~ve~yd~~~~~w~~~a~m~~~r~~~~~~~~~~~lYv~GG~~~~~~~l~~ve~YD~~~~~W~~~a~M~~~R~~~~v~~-l  379 (571)
T KOG4441|consen  301 RSVECYDPKTNEWSSLAPMPSPRCRVGVAVLNGKLYVVGGYDSGSDRLSSVERYDPRTNQWTPVAPMNTKRSDFGVAV-L  379 (571)
T ss_pred             ceeEEecCCcCcEeecCCCCcccccccEEEECCEEEEEccccCCCcccceEEEecCCCCceeccCCccCccccceeEE-E
Confidence            4678889887754433222222144566666554444444442     367788888776543221111111 11221 2


Q ss_pred             CCCEEEE-ecCC-----eEEEEEccCCceEEEecccCCCeEEEEE-ecCCCEEEEecCCC------eEEEeecCccceee
Q psy10867         89 DAAYIAV-SIET-----KLHMWQISSGRLLATASSHYQPITIVKW-SADSNFIVTGGEDG------TICVWQLSRLICKQ  155 (343)
Q Consensus        89 ~~~~l~~-~~d~-----~i~v~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~l~s~~~dg------~i~iwd~~~~~~~~  155 (343)
                      +|.+.|+ |.||     .+..||..+.+-...-. .......... .-++...++|+.++      ++..||..+..-..
T Consensus       380 ~g~iYavGG~dg~~~l~svE~YDp~~~~W~~va~-m~~~r~~~gv~~~~g~iYi~GG~~~~~~~l~sve~YDP~t~~W~~  458 (571)
T KOG4441|consen  380 DGKLYAVGGFDGEKSLNSVECYDPVTNKWTPVAP-MLTRRSGHGVAVLGGKLYIIGGGDGSSNCLNSVECYDPETNTWTL  458 (571)
T ss_pred             CCEEEEEeccccccccccEEEecCCCCcccccCC-CCcceeeeEEEEECCEEEEEcCcCCCccccceEEEEcCCCCceee
Confidence            5666665 5664     58889987764322211 1112222222 22788888888654      46677777653221


Q ss_pred             eeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCe-----EEEEecCCCceEEEeecCCcEE
Q psy10867        156 TVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRT-----CKIFDLCTGEDLLSLILDTRLT  230 (343)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~-----i~~wd~~~~~~~~~~~~~~~i~  230 (343)
                                          +..+........ ++.. ++  .+.+.|+.|+.     +..||.++.+-...-....+..
T Consensus       459 --------------------~~~M~~~R~~~g-~a~~-~~--~iYvvGG~~~~~~~~~VE~ydp~~~~W~~v~~m~~~rs  514 (571)
T KOG4441|consen  459 --------------------IAPMNTRRSGFG-VAVL-NG--KIYVVGGFDGTSALSSVERYDPETNQWTMVAPMTSPRS  514 (571)
T ss_pred             --------------------cCCcccccccce-EEEE-CC--EEEEECCccCCCccceEEEEcCCCCceeEcccCccccc
Confidence                                111111111111 3332 33  67888887763     6778877665443322222222


Q ss_pred             EEEEc-CCCCEEEEEcCCCc
Q psy10867        231 CVAFD-GTEDNIYMGTSEGV  249 (343)
Q Consensus       231 ~~~~~-~~~~~l~~~~~d~~  249 (343)
                      ..... -+++..++|+.||.
T Consensus       515 ~~g~~~~~~~ly~vGG~~~~  534 (571)
T KOG4441|consen  515 AVGVVVLGGKLYAVGGFDGN  534 (571)
T ss_pred             cccEEEECCEEEEEecccCc
Confidence            22111 23556667776663

>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length

Probab=97.21  E-value=0.02  Score=50.41  Aligned_cols=118  Identities=10%  Similarity=0.021  Sum_probs=72.7

Q ss_pred             ceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee--cCCcEEEEEEc--CCCCEEEEEcCCCcEEEEEeecccc
Q psy10867        185 PVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI--LDTRLTCVAFD--GTEDNIYMGTSEGVIKSFCLRQVPR  260 (343)
Q Consensus       185 ~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~--~~~~i~~~~~~--~~~~~l~~~~~d~~i~i~d~~~~~~  260 (343)
                      .+.-+.-+.-+  +..+.-+....+.|||.+.+....+..  ....|..+.|.  |+++.+++.+-...|.++.-.....
T Consensus        31 ~~~li~gss~~--k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy  108 (631)
T PF12234_consen   31 NPSLISGSSIK--KIAVVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDY  108 (631)
T ss_pred             CcceEeecccC--cEEEEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhh
Confidence            34444444444  444455556789999998887554444  37789999885  5788888888888898885432111


Q ss_pred             cccccccCCCCCCc--ccccc-CcEEEEEEccCCCEEEEEeCCCcEEEEec
Q psy10867        261 TRDHHIQDSTSNPD--FIGHE-KQVTSLSCSITGITLLSSSADETLKIWHT  308 (343)
Q Consensus       261 ~~~~~~~~~~~~~~--~~~~~-~~v~~~~~s~~~~~l~s~~~dg~i~iwd~  308 (343)
                      ...  .+...++..  +..|+ .+|.+..|.++|.+++.++  +.+.|+|-
T Consensus       109 ~~~--~p~w~~i~~i~i~~~T~h~Igds~Wl~~G~LvV~sG--Nqlfv~dk  155 (631)
T PF12234_consen  109 TNK--GPSWAPIRKIDISSHTPHPIGDSIWLKDGTLVVGSG--NQLFVFDK  155 (631)
T ss_pred             hcC--CcccceeEEEEeecCCCCCccceeEecCCeEEEEeC--CEEEEECC
Confidence            110  011111111  22333 5789999999997666554  36788774

This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.

>KOG3630|consensus

Probab=97.20  E-value=0.0084  Score=55.11  Aligned_cols=148  Identities=12%  Similarity=0.059  Sum_probs=92.9

Q ss_pred             ccceEEEecCCCCeEEEEecCC-------ce---------EEEEEecCCCCcceEEEEeCCceEEEEE--cCCCeEEEEe
Q psy10867          3 LLNEVAFSYDGSGAISVWEPKG-------GT---------LLMSYKGASVLSPHSMCLLGNDYVLGVE--KGKPMIQAWP   64 (343)
Q Consensus         3 ~v~~~~~s~~~dg~i~iwd~~~-------~~---------~~~~~~~~~~~~v~~~~~~~~~~~~~~~--~~~~~i~iw~   64 (343)
                      +-..+.|..++.+.+.|+-..+       +.         ....++.|..+.+..+...+|+.+.++.  ..+-.|..||
T Consensus        51 n~ysl~Fa~~nsk~L~vfgtknlLi~~it~D~~n~~Vd~~~~~t~~v~k~~pi~~~v~~~D~t~s~v~~tsng~~v~~fD  130 (1405)
T KOG3630|consen   51 NSYSLFFAASNSKSLAVFGTKNLLIDHITSDSTNSLVDADENLTFKVEKEIPIVIFVCFHDATDSVVVSTSNGEAVYSFD  130 (1405)
T ss_pred             cccceEEEecCCcceeeeccccceeecccccccccccccccccceeeeccccceEEEeccCCceEEEEEecCCceEEEEe
Confidence            3456677777777666654432       11         1244555665577777778887554443  3334788899


Q ss_pred             CCCcccce-----------ecccCCcceEEEEECCCC--CEEEEecCCeEEEEEccCCceEEEecccCCCeEEEEEecCC
Q psy10867         65 VNSQEKAQ-----------LRLICPGRISSMQASPDA--AYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADS  131 (343)
Q Consensus        65 ~~~~~~~~-----------~~~~~~~~v~~~~~s~~~--~~l~~~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~  131 (343)
                      +..-....           ..........++.|.|.-  ..++...|+.|++..+........--......++++|+|.|
T Consensus       131 ~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dlsl~V~~~~~~~~~v~s~p~t~~~Tav~WSprG  210 (1405)
T KOG3630|consen  131 LEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDLSLRVKSTKQLAQNVTSFPVTNSQTAVLWSPRG  210 (1405)
T ss_pred             hHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhccccchhhhhhhhhhhhhcccCcccceeeEEecccc
Confidence            87543221           111223346678888753  44555678888888765432221111245678999999999


Q ss_pred             CEEEEecCCCeEEEeecCc
Q psy10867        132 NFIVTGGEDGTICVWQLSR  150 (343)
Q Consensus       132 ~~l~s~~~dg~i~iwd~~~  150 (343)
                      ++++.|-..|++.-|...-
T Consensus       211 KQl~iG~nnGt~vQy~P~l  229 (1405)
T KOG3630|consen  211 KQLFIGRNNGTEVQYEPSL  229 (1405)
T ss_pred             ceeeEecCCCeEEEeeccc
Confidence            9999999999999887643

>COG4257 Vgb Streptogramin lyase [Defense mechanisms]

Probab=97.19  E-value=0.069  Score=41.38  Aligned_cols=244  Identities=11%  Similarity=0.013  Sum_probs=153.9

Q ss_pred             EecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEEecCCeEEEEEccCCc
Q psy10867         31 YKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSGR  110 (343)
Q Consensus        31 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~  110 (343)
                      |....+.....++..|||.+-.++...+.|--.|..+++....-.+....-..+..-|||..-++-....|.-.|.++.+
T Consensus        56 fpvp~G~ap~dvapapdG~VWft~qg~gaiGhLdP~tGev~~ypLg~Ga~Phgiv~gpdg~~Witd~~~aI~R~dpkt~e  135 (353)
T COG4257          56 FPVPNGSAPFDVAPAPDGAVWFTAQGTGAIGHLDPATGEVETYPLGSGASPHGIVVGPDGSAWITDTGLAIGRLDPKTLE  135 (353)
T ss_pred             eccCCCCCccccccCCCCceEEecCccccceecCCCCCceEEEecCCCCCCceEEECCCCCeeEecCcceeEEecCcccc
Confidence            33333336788899999987777777788888899999887766666667778888899887776333366667766554


Q ss_pred             eEE-Ee--cccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecc-cccce
Q psy10867        111 LLA-TA--SSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQ-HSLPV  186 (343)
Q Consensus       111 ~~~-~~--~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v  186 (343)
                      ... .+  +.-........|.+.|++-+++.. |.---.|..+.                       .+..+.. .....
T Consensus       136 vt~f~lp~~~a~~nlet~vfD~~G~lWFt~q~-G~yGrLdPa~~-----------------------~i~vfpaPqG~gp  191 (353)
T COG4257         136 VTRFPLPLEHADANLETAVFDPWGNLWFTGQI-GAYGRLDPARN-----------------------VISVFPAPQGGGP  191 (353)
T ss_pred             eEEeecccccCCCcccceeeCCCccEEEeecc-ccceecCcccC-----------------------ceeeeccCCCCCC
Confidence            321 11  223456778889999998888763 22111122111                       1111111 23456


Q ss_pred             EEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeec----CCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccc
Q psy10867        187 THVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLIL----DTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTR  262 (343)
Q Consensus       187 ~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~----~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~  262 (343)
                      +.|+..|+|  ...++.-.++.|...|..++.. ..+..    ......+--+|.+..-++-...+.+..||-.... -.
T Consensus       192 yGi~atpdG--svwyaslagnaiaridp~~~~a-ev~p~P~~~~~gsRriwsdpig~~wittwg~g~l~rfdPs~~s-W~  267 (353)
T COG4257         192 YGICATPDG--SVWYASLAGNAIARIDPFAGHA-EVVPQPNALKAGSRRIWSDPIGRAWITTWGTGSLHRFDPSVTS-WI  267 (353)
T ss_pred             cceEECCCC--cEEEEeccccceEEcccccCCc-ceecCCCcccccccccccCccCcEEEeccCCceeeEeCccccc-ce
Confidence            789999999  6777777788888888777632 22222    2335556667788887877778888888766532 11


Q ss_pred             cccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccc
Q psy10867        263 DHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISR  311 (343)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~  311 (343)
                               ...+.+.+..-.++.....++.-.+--..|.|.-+|-++-
T Consensus       268 ---------eypLPgs~arpys~rVD~~grVW~sea~agai~rfdpeta  307 (353)
T COG4257         268 ---------EYPLPGSKARPYSMRVDRHGRVWLSEADAGAIGRFDPETA  307 (353)
T ss_pred             ---------eeeCCCCCCCcceeeeccCCcEEeeccccCceeecCcccc
Confidence                     2234444455566666666665555445566776776543

>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain

Probab=97.06  E-value=0.15  Score=42.86  Aligned_cols=99  Identities=9%  Similarity=0.118  Sum_probs=58.2

Q ss_pred             cceEEEEeCCceEEEEEc-----------CCC-eEEEEeCCC--ccc--ceecccCCcceEEEEECCCCCEEEEecCCeE
Q psy10867         38 SPHSMCLLGNDYVLGVEK-----------GKP-MIQAWPVNS--QEK--AQLRLICPGRISSMQASPDAAYIAVSIETKL  101 (343)
Q Consensus        38 ~v~~~~~~~~~~~~~~~~-----------~~~-~i~iw~~~~--~~~--~~~~~~~~~~v~~~~~s~~~~~l~~~~d~~i  101 (343)
                      .+..|+|.++|+++++..           ..+ .|.+++-.+  ++.  ...+.........+++.+++ ++++... .|
T Consensus        15 ~P~~ia~d~~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~l~~p~Gi~~~~~G-lyV~~~~-~i   92 (367)
T TIGR02604        15 NPIAVCFDERGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEELSMVTGLAVAVGG-VYVATPP-DI   92 (367)
T ss_pred             CCceeeECCCCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecCCCCccceeEecCC-EEEeCCC-eE
Confidence            678899999999888753           113 677775432  222  13333334456889999988 6665444 44


Q ss_pred             EEE-EccCC-----ce--E-EEecc----cCCCeEEEEEecCCCEEEEec
Q psy10867        102 HMW-QISSG-----RL--L-ATASS----HYQPITIVKWSADSNFIVTGG  138 (343)
Q Consensus       102 ~v~-~~~~~-----~~--~-~~~~~----~~~~v~~~~~~~~~~~l~s~~  138 (343)
                      ..+ +.+..     +.  + ..+..    +......++|.|||.+.++-+
T Consensus        93 ~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G  142 (367)
T TIGR02604        93 LFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHG  142 (367)
T ss_pred             EEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecc
Confidence            434 44211     21  1 12222    134477899999998766554

All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.

>PF15390 DUF4613: Domain of unknown function (DUF4613)

Probab=97.00  E-value=0.12  Score=44.61  Aligned_cols=149  Identities=12%  Similarity=0.100  Sum_probs=89.0

Q ss_pred             cceEEEEeCCceEEEEEc--CCCeEEEEeCCCcccceecccCCcceEEEEECCCC-----CEEEEecCCeEEEEEccC--
Q psy10867         38 SPHSMCLLGNDYVLGVEK--GKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDA-----AYIAVSIETKLHMWQISS--  108 (343)
Q Consensus        38 ~v~~~~~~~~~~~~~~~~--~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~-----~~l~~~~d~~i~v~~~~~--  108 (343)
                      ++..++|....+++.+.-  .+|.++.=|       ....+.-..|..+.|.|-+     .+||+-....|.||.+.-  
T Consensus        21 PvhGlaWTDGkqVvLT~L~l~~gE~kfGd-------s~viGqFEhV~GlsW~P~~~~~~paLLAVQHkkhVtVWqL~~s~   93 (671)
T PF15390_consen   21 PVHGLAWTDGKQVVLTDLQLHNGEPKFGD-------SKVIGQFEHVHGLSWAPPCTADTPALLAVQHKKHVTVWQLCPST   93 (671)
T ss_pred             cccceEecCCCEEEEEeeeeeCCccccCC-------ccEeeccceeeeeeecCcccCCCCceEEEeccceEEEEEeccCc
Confidence            778899975555554432  112222111       1122444678999999853     588888899999999852  


Q ss_pred             ---CceEEEeccc---CC--CeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeec
Q psy10867        109 ---GRLLATASSH---YQ--PITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKS  180 (343)
Q Consensus       109 ---~~~~~~~~~~---~~--~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (343)
                         ++.+..-..+   .-  --..+.|+|....|+.-.....-.+++++....                     .+..--
T Consensus        94 ~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT~~dvSV~~sV~~d~s---------------------rVkaDi  152 (671)
T PF15390_consen   94 TERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLTARDVSVLPSVHCDSS---------------------RVKADI  152 (671)
T ss_pred             cccccceeeeeeeccCCcccCCCcccccCCCceEEEEecCceeEeeeeeeCCc---------------------eEEEec
Confidence               2222211111   11  124678999988887766655545566654322                     222223


Q ss_pred             ccccceEEEEeecCCCceEEEEeeCCCeEEEEecC
Q psy10867        181 QHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLC  215 (343)
Q Consensus       181 ~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~  215 (343)
                      ...+.|.|.+|.+||+ +++++.+..=.-++||-.
T Consensus       153 ~~~G~IhCACWT~DG~-RLVVAvGSsLHSyiWd~~  186 (671)
T PF15390_consen  153 KTSGLIHCACWTKDGQ-RLVVAVGSSLHSYIWDSA  186 (671)
T ss_pred             cCCceEEEEEecCcCC-EEEEEeCCeEEEEEecCc
Confidence            4667899999999996 444444445556889843

>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation

Probab=96.99  E-value=0.12  Score=40.77  Aligned_cols=151  Identities=17%  Similarity=0.052  Sum_probs=87.9

Q ss_pred             cceEEEEeCCceEEEEEc---CCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEEe-cCCeEEEE-EccCCceE
Q psy10867         38 SPHSMCLLGNDYVLGVEK---GKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVS-IETKLHMW-QISSGRLL  112 (343)
Q Consensus        38 ~v~~~~~~~~~~~~~~~~---~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~d~~i~v~-~~~~~~~~  112 (343)
                      .+.+.++++++..++.-.   +...+.++...  ....... ....+....|++++.+.+.. .+...+++ +..+++..
T Consensus        25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~~--~~~~~~~-~g~~l~~PS~d~~g~~W~v~~~~~~~~~~~~~~~g~~~  101 (253)
T PF10647_consen   25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGPAG--GPVRPVL-TGGSLTRPSWDPDGWVWTVDDGSGGVRVVRDSASGTGE  101 (253)
T ss_pred             cccceEECCCCCeEEEEEEcCCCCEEEEEcCC--Ccceeec-cCCccccccccCCCCEEEEEcCCCceEEEEecCCCcce
Confidence            688999999997655544   32455555433  3232221 23378888999998877763 34444555 33333322


Q ss_pred             -EEecc--cCCCeEEEEEecCCCEEEEec---CCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccce
Q psy10867        113 -ATASS--HYQPITIVKWSADSNFIVTGG---EDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPV  186 (343)
Q Consensus       113 -~~~~~--~~~~v~~~~~~~~~~~l~s~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  186 (343)
                       ..+..  -.+.|..+.++|||..++...   .++.|.+=-+......             .......+..........+
T Consensus       102 ~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g-------------~~~~l~~~~~~~~~~~~~v  168 (253)
T PF10647_consen  102 PVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDG-------------VPRRLTGPRRVAPPLLSDV  168 (253)
T ss_pred             eEEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCC-------------CcceeccceEecccccCcc
Confidence             12221  122899999999999877655   3577777655432111             0001112344444456789


Q ss_pred             EEEEeecCCCceEEEEeeCC
Q psy10867        187 THVTLSKLGAKSRVASVSHD  206 (343)
Q Consensus       187 ~~~~~~~~~~~~~l~~~~~d  206 (343)
                      ..+.|.+++  .+++.+...
T Consensus       169 ~~v~W~~~~--~L~V~~~~~  186 (253)
T PF10647_consen  169 TDVAWSDDS--TLVVLGRSA  186 (253)
T ss_pred             eeeeecCCC--EEEEEeCCC
Confidence            999999998  666655443

It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.

>KOG2079|consensus

Probab=96.98  E-value=0.007  Score=55.21  Aligned_cols=102  Identities=19%  Similarity=0.233  Sum_probs=76.3

Q ss_pred             CCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeE
Q psy10867        130 DSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTC  209 (343)
Q Consensus       130 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i  209 (343)
                      .+..++.|+..|.+...|....-.                     +...-..-.++|++++|+.+|  ..++.|-.+|.|
T Consensus        98 ~~~~ivi~Ts~ghvl~~d~~~nL~---------------------~~~~ne~v~~~Vtsvafn~dg--~~l~~G~~~G~V  154 (1206)
T KOG2079|consen   98 VVVPIVIGTSHGHVLLSDMTGNLG---------------------PLHQNERVQGPVTSVAFNQDG--SLLLAGLGDGHV  154 (1206)
T ss_pred             eeeeEEEEcCchhhhhhhhhcccc---------------------hhhcCCccCCcceeeEecCCC--ceeccccCCCcE
Confidence            456788999999999998876411                     222223456899999999999  899999999999


Q ss_pred             EEEecCCCceEEEee-cCCc---EEEEEEcCCCCEEEEEcCCCcEEEEEee
Q psy10867        210 KIFDLCTGEDLLSLI-LDTR---LTCVAFDGTEDNIYMGTSEGVIKSFCLR  256 (343)
Q Consensus       210 ~~wd~~~~~~~~~~~-~~~~---i~~~~~~~~~~~l~~~~~d~~i~i~d~~  256 (343)
                      .+||+..++.++.+. +..+   +-.+.+..++..++++...|.  +|.+.
T Consensus       155 ~v~D~~~~k~l~~i~e~~ap~t~vi~v~~t~~nS~llt~D~~Gs--f~~lv  203 (1206)
T KOG2079|consen  155 TVWDMHRAKILKVITEHGAPVTGVIFVGRTSQNSKLLTSDTGGS--FWKLV  203 (1206)
T ss_pred             EEEEccCCcceeeeeecCCccceEEEEEEeCCCcEEEEccCCCc--eEEEE
Confidence            999999999888876 3333   444455556667888888886  56554

>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation

Probab=96.93  E-value=0.14  Score=40.46  Aligned_cols=152  Identities=9%  Similarity=-0.027  Sum_probs=90.1

Q ss_pred             CeEEEEEecCCCEEEEec---CCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCc
Q psy10867        121 PITIVKWSADSNFIVTGG---EDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAK  197 (343)
Q Consensus       121 ~v~~~~~~~~~~~l~s~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  197 (343)
                      .+.+.+++++++.++...   ....+.++.....                       ....+  ....+....|++++  
T Consensus        25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~~~~-----------------------~~~~~--~g~~l~~PS~d~~g--   77 (253)
T PF10647_consen   25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGPAGGP-----------------------VRPVL--TGGSLTRPSWDPDG--   77 (253)
T ss_pred             cccceEECCCCCeEEEEEEcCCCCEEEEEcCCCc-----------------------ceeec--cCCccccccccCCC--
Confidence            688999999999777665   3334555554432                       11111  22367778899987  


Q ss_pred             eEEEEeeCCCeEEEEe-cCCCceE-EEee--cC-CcEEEEEEcCCCCEEEEEc---CCCcEEEEEeecccccccccccCC
Q psy10867        198 SRVASVSHDRTCKIFD-LCTGEDL-LSLI--LD-TRLTCVAFDGTEDNIYMGT---SEGVIKSFCLRQVPRTRDHHIQDS  269 (343)
Q Consensus       198 ~~l~~~~~d~~i~~wd-~~~~~~~-~~~~--~~-~~i~~~~~~~~~~~l~~~~---~d~~i~i~d~~~~~~~~~~~~~~~  269 (343)
                      ...+....+...+++. ..+++.. ....  .. ..|..+.++|||..++.-.   .++.|.+--+.....-....+  .
T Consensus        78 ~~W~v~~~~~~~~~~~~~~~g~~~~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l--~  155 (253)
T PF10647_consen   78 WVWTVDDGSGGVRVVRDSASGTGEPVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRL--T  155 (253)
T ss_pred             CEEEEEcCCCceEEEEecCCCcceeEEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCccee--c
Confidence            5666655566666663 3333322 2222  12 2899999999999888754   357777776654322200000  1


Q ss_pred             CCCCccccccCcEEEEEEccCCCEEEEEeCCC
Q psy10867        270 TSNPDFIGHEKQVTSLSCSITGITLLSSSADE  301 (343)
Q Consensus       270 ~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg  301 (343)
                      .+..........++.+.|.+++.+++.+...+
T Consensus       156 ~~~~~~~~~~~~v~~v~W~~~~~L~V~~~~~~  187 (253)
T PF10647_consen  156 GPRRVAPPLLSDVTDVAWSDDSTLVVLGRSAG  187 (253)
T ss_pred             cceEecccccCcceeeeecCCCEEEEEeCCCC
Confidence            11222223356789999999998777665443

It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.

>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length

Probab=96.93  E-value=0.092  Score=46.53  Aligned_cols=110  Identities=17%  Similarity=0.248  Sum_probs=74.4

Q ss_pred             cceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceec-ccCCcceEEEEEC--CCCCEEE-EecCCeEEEEEcc-----C
Q psy10867         38 SPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLR-LICPGRISSMQAS--PDAAYIA-VSIETKLHMWQIS-----S  108 (343)
Q Consensus        38 ~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~-~~~~~~v~~~~~s--~~~~~l~-~~~d~~i~v~~~~-----~  108 (343)
                      .+.-+.-+.-+++.++..+...+.|||...+...... ....+.|.++.|.  |+++.+. +|..+.|.+|.-.     .
T Consensus        31 ~~~li~gss~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy~~  110 (631)
T PF12234_consen   31 NPSLISGSSIKKIAVVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDYTN  110 (631)
T ss_pred             CcceEeecccCcEEEEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhhhc
Confidence            4455555556777777666679999999988754222 1557889999995  5776555 5999999998631     1


Q ss_pred             ----CceEEE--ecccC-CCeEEEEEecCCCEEEEecCCCeEEEeecC
Q psy10867        109 ----GRLLAT--ASSHY-QPITIVKWSADSNFIVTGGEDGTICVWQLS  149 (343)
Q Consensus       109 ----~~~~~~--~~~~~-~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~  149 (343)
                          -..+..  +..|+ .+|.+..|.++|..++.++  +++.|+|-.
T Consensus       111 ~~p~w~~i~~i~i~~~T~h~Igds~Wl~~G~LvV~sG--Nqlfv~dk~  156 (631)
T PF12234_consen  111 KGPSWAPIRKIDISSHTPHPIGDSIWLKDGTLVVGSG--NQLFVFDKW  156 (631)
T ss_pred             CCcccceeEEEEeecCCCCCccceeEecCCeEEEEeC--CEEEEECCC
Confidence                122222  23444 5799999999998666554  578888754

This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.

>KOG3630|consensus

Probab=96.78  E-value=0.049  Score=50.44  Aligned_cols=144  Identities=15%  Similarity=0.052  Sum_probs=92.7

Q ss_pred             cceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEE--------Ee----ecCCcEEEEEEcCCCC-EEEEEcCCCcE
Q psy10867        184 LPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLL--------SL----ILDTRLTCVAFDGTED-NIYMGTSEGVI  250 (343)
Q Consensus       184 ~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~--------~~----~~~~~i~~~~~~~~~~-~l~~~~~d~~i  250 (343)
                      -++..+...+++.-..++..+.+-.|..||+++...-.        ..    .......++.|+|.-. ..++...|+.|
T Consensus       101 ~pi~~~v~~~D~t~s~v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dlsl  180 (1405)
T KOG3630|consen  101 IPIVIFVCFHDATDSVVVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDLSL  180 (1405)
T ss_pred             ccceEEEeccCCceEEEEEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhccccch
Confidence            45556666666521334444555578999997543211        11    1233466778888643 34556678888


Q ss_pred             EEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc-----cCCceEE
Q psy10867        251 KSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-----HKGPVLG  325 (343)
Q Consensus       251 ~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-----~~~~v~~  325 (343)
                      ++..+......          +..+ .-....++++|+|.|+.++.|-..|++.-|.. .++....+.     ....|.+
T Consensus       181 ~V~~~~~~~~~----------v~s~-p~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P-~leik~~ip~Pp~~e~yrvl~  248 (1405)
T KOG3630|consen  181 RVKSTKQLAQN----------VTSF-PVTNSQTAVLWSPRGKQLFIGRNNGTEVQYEP-SLEIKSEIPEPPVEENYRVLS  248 (1405)
T ss_pred             hhhhhhhhhhh----------hccc-CcccceeeEEeccccceeeEecCCCeEEEeec-ccceeecccCCCcCCCcceeE
Confidence            88776543221          1111 23456899999999999999999999999975 344333332     3578999


Q ss_pred             EEEccCCCeeeecc
Q psy10867        326 AFLGLLPPAIHDYD  339 (343)
Q Consensus       326 ~~~sp~~~~l~~~~  339 (343)
                      +.|-....+|++.+
T Consensus       249 v~Wl~t~eflvvy~  262 (1405)
T KOG3630|consen  249 VTWLSTQEFLVVYG  262 (1405)
T ss_pred             EEEecceeEEEEec
Confidence            99998888887654

>KOG2444|consensus

Probab=96.68  E-value=0.014  Score=43.73  Aligned_cols=103  Identities=12%  Similarity=0.145  Sum_probs=63.8

Q ss_pred             eEEEEEcCCCeEEEEeCCCcccc-eecccCCcceEEEEEC-CCCCEEEE-ecCCeEEEEEccCCceEEEecccC-CCeEE
Q psy10867         49 YVLGVEKGKPMIQAWPVNSQEKA-QLRLICPGRISSMQAS-PDAAYIAV-SIETKLHMWQISSGRLLATASSHY-QPITI  124 (343)
Q Consensus        49 ~~~~~~~~~~~i~iw~~~~~~~~-~~~~~~~~~v~~~~~s-~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~-~~v~~  124 (343)
                      .-+++|..+|.|.+|+....... .........|.++.-. .++.+..+ +.++.|+.|++.-++.+.....|. .++..
T Consensus        71 ~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~~~~e~  150 (238)
T KOG2444|consen   71 AKLMVGTSDGAVYVFNWNLEGAHSDRVCSGEESIDLGIPNGRDSSLGCVGAQDGRIRACNIKPNKVLGYVGQHNFESGEE  150 (238)
T ss_pred             ceEEeecccceEEEecCCccchHHHhhhcccccceeccccccccceeEEeccCCceeeeccccCceeeeeccccCCCcce
Confidence            44555666699999988732222 1111222333333222 23334444 789999999999888887777777 55555


Q ss_pred             EEEecCCCEEEEe--cCCCeEEEeecCcc
Q psy10867        125 VKWSADSNFIVTG--GEDGTICVWQLSRL  151 (343)
Q Consensus       125 ~~~~~~~~~l~s~--~~dg~i~iwd~~~~  151 (343)
                      ...+..++.++++  |.|..++.|++...
T Consensus       151 ~ivv~sd~~i~~a~~S~d~~~k~W~ve~~  179 (238)
T KOG2444|consen  151 LIVVGSDEFLKIADTSHDRVLKKWNVEKI  179 (238)
T ss_pred             eEEecCCceEEeeccccchhhhhcchhhh
Confidence            5555566666666  67777777777653

>KOG1916|consensus

Probab=96.66  E-value=0.0038  Score=55.83  Aligned_cols=195  Identities=15%  Similarity=0.257  Sum_probs=109.6

Q ss_pred             CeEEEEeCCCccc-ceecccCCcceEEEEECC-CCCEEEEecCCeEEEEEcc--CCceEEEe-----cccCCCeEEEEEe
Q psy10867         58 PMIQAWPVNSQEK-AQLRLICPGRISSMQASP-DAAYIAVSIETKLHMWQIS--SGRLLATA-----SSHYQPITIVKWS  128 (343)
Q Consensus        58 ~~i~iw~~~~~~~-~~~~~~~~~~v~~~~~s~-~~~~l~~~~d~~i~v~~~~--~~~~~~~~-----~~~~~~v~~~~~~  128 (343)
                      +.+++-+..+... -....+..+.+..+.|.. +...+. -.-|.+.||+++  .|+....+     ......+.-+.|.
T Consensus       111 ~~vrvaN~~~sm~~~~l~kgf~G~v~dl~fah~~~pk~~-~~vg~lfVy~vd~l~G~iq~~l~v~~~~p~gs~~~~V~wc  189 (1283)
T KOG1916|consen  111 NGVRVANQEPSMRHNELAKGFPGGVGDLQFAHTKCPKGR-RLVGELFVYDVDVLQGEIQPQLEVTPITPYGSDPQLVSWC  189 (1283)
T ss_pred             hhhhhccCcchhHHHHHHhcCCCCcccccccccCChHHH-HHhhhhheeehHhhccccccceEEeecCcCCCCcceeeec
Confidence            4566655544332 133446778888888853 222222 223667888865  34332222     2233445556665


Q ss_pred             c---CCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeC
Q psy10867        129 A---DSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSH  205 (343)
Q Consensus       129 ~---~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~  205 (343)
                      |   +.-++..+-.++.+++..+++.                       ....+.+|...+..+++-..|   ++...+ 
T Consensus       190 p~~~~~~~ic~~~~~~~i~lL~~~ra-----------------------~~~l~rsHs~~~~d~a~~~~g---~~~l~~-  242 (1283)
T KOG1916|consen  190 PIAVNKVYICYGLKGGEIRLLNINRA-----------------------LRSLFRSHSQRVTDMAFFAEG---VLKLAS-  242 (1283)
T ss_pred             ccccccceeeeccCCCceeEeeechH-----------------------HHHHHHhcCCCcccHHHHhhc---hhhhee-
Confidence            5   6667888888899998887764                       224445688888888877665   222221 


Q ss_pred             CCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccC-cEEE
Q psy10867        206 DRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEK-QVTS  284 (343)
Q Consensus       206 d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~  284 (343)
                                                  .+|||+.++.+..||.++.|.+.-.....      -.++...+.|.+ +-.|
T Consensus       243 ----------------------------lSpDGtv~a~a~~dG~v~f~Qiyi~g~~~------~rclhewkphd~~p~vC  288 (1283)
T KOG1916|consen  243 ----------------------------LSPDGTVFAWAISDGSVGFYQIYITGKIV------HRCLHEWKPHDKHPRVC  288 (1283)
T ss_pred             ----------------------------eCCCCcEEEEeecCCccceeeeeeecccc------HhhhhccCCCCCCCcee
Confidence                                        57778888888888877777665332211      112333444442 2222


Q ss_pred             EEEccC-------C--CEEEEEe-CCCcEEEEecccceee
Q psy10867        285 LSCSIT-------G--ITLLSSS-ADETLKIWHTISRQCL  314 (343)
Q Consensus       285 ~~~s~~-------~--~~l~s~~-~dg~i~iwd~~~~~~~  314 (343)
                      .-++.+       +  .++++++ .+..+++|.....+|+
T Consensus       289 ~lc~~~~~~~v~i~~w~~~Itttd~nre~k~w~~a~w~Cl  328 (1283)
T KOG1916|consen  289 WLCHKQEILVVSIGKWVLRITTTDVNREEKFWAEAPWQCL  328 (1283)
T ss_pred             eeeccccccCCccceeEEEEecccCCcceeEeeccchhhh
Confidence            223221       1  2344443 4567999998877776

>PRK13684 Ycf48-like protein; Provisional

Probab=96.59  E-value=0.33  Score=40.15  Aligned_cols=151  Identities=8%  Similarity=-0.017  Sum_probs=87.7

Q ss_pred             cceEEEEeCCceEEEEEcCCCeEEEE-eCCCcccceecccCCcceEEEEECCCCCEEEEecCCeEEEEEccCCceEEEec
Q psy10867         38 SPHSMCLLGNDYVLGVEKGKPMIQAW-PVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATAS  116 (343)
Q Consensus        38 ~v~~~~~~~~~~~~~~~~~~~~i~iw-~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~  116 (343)
                      .+.++.+.|++.+++++.. |.+..- +-...............++.+.+.++++.++++..|.+.+=..+.|..-....
T Consensus       174 ~~~~i~~~~~g~~v~~g~~-G~i~~s~~~gg~tW~~~~~~~~~~l~~i~~~~~g~~~~vg~~G~~~~~s~d~G~sW~~~~  252 (334)
T PRK13684        174 VVRNLRRSPDGKYVAVSSR-GNFYSTWEPGQTAWTPHQRNSSRRLQSMGFQPDGNLWMLARGGQIRFNDPDDLESWSKPI  252 (334)
T ss_pred             eEEEEEECCCCeEEEEeCC-ceEEEEcCCCCCeEEEeeCCCcccceeeeEcCCCCEEEEecCCEEEEccCCCCCcccccc
Confidence            6788999999988888887 655432 22211122222344567899999999998888888876543344444322221


Q ss_pred             c----cCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEee
Q psy10867        117 S----HYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLS  192 (343)
Q Consensus       117 ~----~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  192 (343)
                      .    ....+..+.+.|++..++ ++.+|.+.. ....++.-.                   .......-....+.+.+.
T Consensus       253 ~~~~~~~~~l~~v~~~~~~~~~~-~G~~G~v~~-S~d~G~tW~-------------------~~~~~~~~~~~~~~~~~~  311 (334)
T PRK13684        253 IPEITNGYGYLDLAYRTPGEIWA-GGGNGTLLV-SKDGGKTWE-------------------KDPVGEEVPSNFYKIVFL  311 (334)
T ss_pred             CCccccccceeeEEEcCCCCEEE-EcCCCeEEE-eCCCCCCCe-------------------ECCcCCCCCcceEEEEEe
Confidence            1    123578889998777555 455675543 333332211                   111101122356677777


Q ss_pred             cCCCceEEEEeeCCCeEEEEe
Q psy10867        193 KLGAKSRVASVSHDRTCKIFD  213 (343)
Q Consensus       193 ~~~~~~~l~~~~~d~~i~~wd  213 (343)
                      .++  .. +..+..|.|.-|+
T Consensus       312 ~~~--~~-~~~G~~G~il~~~  329 (334)
T PRK13684        312 DPE--KG-FVLGQRGVLLRYV  329 (334)
T ss_pred             CCC--ce-EEECCCceEEEec
Confidence            665  34 4566778887775

>PRK10115 protease 2; Provisional

Probab=96.58  E-value=0.59  Score=42.91  Aligned_cols=111  Identities=6%  Similarity=-0.026  Sum_probs=68.4

Q ss_pred             CcceEEEEeCCceEEEEEcCC-----CeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-ec-C-----CeEEEE
Q psy10867         37 LSPHSMCLLGNDYVLGVEKGK-----PMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SI-E-----TKLHMW  104 (343)
Q Consensus        37 ~~v~~~~~~~~~~~~~~~~~~-----~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~-d-----~~i~v~  104 (343)
                      ..+..+.++||+++++.+.+.     ..|++.|+.+++.+........  ..++|++|++.|+- .. +     ..|+.+
T Consensus       127 ~~l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~~~~--~~~~w~~D~~~~~y~~~~~~~~~~~~v~~h  204 (686)
T PRK10115        127 YTLGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLDNVE--PSFVWANDSWTFYYVRKHPVTLLPYQVWRH  204 (686)
T ss_pred             EEEeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCccccCcc--eEEEEeeCCCEEEEEEecCCCCCCCEEEEE
Confidence            367788999999888776543     2688889988764422222221  46999999876653 22 1     368888


Q ss_pred             EccCC--ceEEEecccCCCeE-EEEEecCCCEEEEecC---CCeEEEeecC
Q psy10867        105 QISSG--RLLATASSHYQPIT-IVKWSADSNFIVTGGE---DGTICVWQLS  149 (343)
Q Consensus       105 ~~~~~--~~~~~~~~~~~~v~-~~~~~~~~~~l~s~~~---dg~i~iwd~~  149 (343)
                      ++.++  +....+........ .+..+.++++++..+.   ++.+.+++..
T Consensus       205 ~lgt~~~~d~lv~~e~~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~~  255 (686)
T PRK10115        205 TIGTPASQDELVYEEKDDTFYVSLHKTTSKHYVVIHLASATTSEVLLLDAE  255 (686)
T ss_pred             ECCCChhHCeEEEeeCCCCEEEEEEEcCCCCEEEEEEECCccccEEEEECc
Confidence            88887  33444443333333 2233447776655433   4568888853

>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]

Probab=96.56  E-value=0.13  Score=43.57  Aligned_cols=130  Identities=9%  Similarity=0.015  Sum_probs=84.5

Q ss_pred             eEEEEeeCCCeEEEEecCCCceEEEeecCCcEEEEEEcCCCC-------EEEEEcCCCcEEEEEeecccccccccccCCC
Q psy10867        198 SRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTED-------NIYMGTSEGVIKSFCLRQVPRTRDHHIQDST  270 (343)
Q Consensus       198 ~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~-------~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~  270 (343)
                      -++..+.....++-.|++.|+.+..+.....+ -+.|.|..+       .-++|-.+..|.-.|.+-....  +      
T Consensus       481 li~~dg~~~~kLykmDIErGkvveeW~~~ddv-vVqy~p~~kf~qmt~eqtlvGlS~~svFrIDPR~~gNK--i------  551 (776)
T COG5167         481 LIYLDGGERDKLYKMDIERGKVVEEWDLKDDV-VVQYNPYFKFQQMTDEQTLVGLSDYSVFRIDPRARGNK--I------  551 (776)
T ss_pred             eEEecCCCcccceeeecccceeeeEeecCCcc-eeecCCchhHHhcCccceEEeecccceEEecccccCCc--e------
Confidence            34455667778888899999999999876666 677888532       3445656666666665542210  0      


Q ss_pred             CCCccccccCcEEEEEEcc----CCCEEEEEeCCCcEEEEecccceeeeecc-cCCceEEEEEccCCCeeeecc
Q psy10867        271 SNPDFIGHEKQVTSLSCSI----TGITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVLGAFLGLLPPAIHDYD  339 (343)
Q Consensus       271 ~~~~~~~~~~~v~~~~~s~----~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~  339 (343)
                         ........++.-.|+.    ...++|.+|..|.|++||.-.-+.-..+. ....|..+..+.+|++|++.|
T Consensus       552 ---~v~esKdY~tKn~Fss~~tTesGyIa~as~kGDirLyDRig~rAKtalP~lG~aIk~idvta~Gk~ilaTC  622 (776)
T COG5167         552 ---KVVESKDYKTKNKFSSGMTTESGYIAAASRKGDIRLYDRIGKRAKTALPGLGDAIKHIDVTANGKHILATC  622 (776)
T ss_pred             ---eeeeehhccccccccccccccCceEEEecCCCceeeehhhcchhhhcCcccccceeeeEeecCCcEEEEee
Confidence               0011122233333333    34599999999999999964433333344 567899999999999988765

>PHA03098 kelch-like protein; Provisional

Probab=96.53  E-value=0.54  Score=41.91  Aligned_cols=50  Identities=10%  Similarity=0.134  Sum_probs=26.8

Q ss_pred             eEEEEEccCCceEEEec--ccCCCeEEEEEecCCCEEEEecCCC-----eEEEeecCcc
Q psy10867        100 KLHMWQISSGRLLATAS--SHYQPITIVKWSADSNFIVTGGEDG-----TICVWQLSRL  151 (343)
Q Consensus       100 ~i~v~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~s~~~dg-----~i~iwd~~~~  151 (343)
                      .+..||..+.+....-.  ........+  .-+++.++.|+.++     .+..||..+.
T Consensus       312 ~v~~yd~~~~~W~~~~~~~~~R~~~~~~--~~~~~lyv~GG~~~~~~~~~v~~yd~~~~  368 (534)
T PHA03098        312 SVVSYDTKTKSWNKVPELIYPRKNPGVT--VFNNRIYVIGGIYNSISLNTVESWKPGES  368 (534)
T ss_pred             cEEEEeCCCCeeeECCCCCcccccceEE--EECCEEEEEeCCCCCEecceEEEEcCCCC
Confidence            57888887765532211  111112222  22677777887652     4666776654

>PHA03098 kelch-like protein; Provisional

Probab=96.52  E-value=0.55  Score=41.86  Aligned_cols=132  Identities=8%  Similarity=0.051  Sum_probs=61.7

Q ss_pred             eEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCC-----CeEEEEeCCCcccceecc-cCCcceEEEEECCC
Q psy10867         16 AISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGK-----PMIQAWPVNSQEKAQLRL-ICPGRISSMQASPD   89 (343)
Q Consensus        16 ~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-----~~i~iw~~~~~~~~~~~~-~~~~~v~~~~~s~~   89 (343)
                      .+..||..+.+-...-.......-.+++.. ++++.+.|+.+     ..+..||..+++...... .....-.+++. -+
T Consensus       312 ~v~~yd~~~~~W~~~~~~~~~R~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~lp~~r~~~~~~~-~~  389 (534)
T PHA03098        312 SVVSYDTKTKSWNKVPELIYPRKNPGVTVF-NNRIYVIGGIYNSISLNTVESWKPGESKWREEPPLIFPRYNPCVVN-VN  389 (534)
T ss_pred             cEEEEeCCCCeeeECCCCCcccccceEEEE-CCEEEEEeCCCCCEecceEEEEcCCCCceeeCCCcCcCCccceEEE-EC
Confidence            567788776654322111111011223333 45555555432     357788887765442211 11111112222 25


Q ss_pred             CCEEEE-ec--C----CeEEEEEccCCceEEE--ecccCCCeEEEEEecCCCEEEEecCCC--------eEEEeecCcc
Q psy10867         90 AAYIAV-SI--E----TKLHMWQISSGRLLAT--ASSHYQPITIVKWSADSNFIVTGGEDG--------TICVWQLSRL  151 (343)
Q Consensus        90 ~~~l~~-~~--d----~~i~v~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~s~~~dg--------~i~iwd~~~~  151 (343)
                      +++.+. |.  +    +.+..||+.+++-...  +....... +++ ..++..++.|+.++        .+.+||..+.
T Consensus       390 ~~iYv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~-~~~-~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~  466 (534)
T PHA03098        390 NLIYVIGGISKNDELLKTVECFSLNTNKWSKGSPLPISHYGG-CAI-YHDGKIYVIGGISYIDNIKVYNIVESYNPVTN  466 (534)
T ss_pred             CEEEEECCcCCCCcccceEEEEeCCCCeeeecCCCCccccCc-eEE-EECCEEEEECCccCCCCCcccceEEEecCCCC
Confidence            565554 42  1    4688999887644321  11111111 222 23566677776432        3778887765

>PF15390 DUF4613: Domain of unknown function (DUF4613)

Probab=96.50  E-value=0.45  Score=41.33  Aligned_cols=156  Identities=6%  Similarity=0.082  Sum_probs=90.4

Q ss_pred             cceEEEEECCCCCEEE-Ee---cCCeEEEEEccCCceEEEecccCCCeEEEEEecC----CCEEEEecCCCeEEEeecCc
Q psy10867         79 GRISSMQASPDAAYIA-VS---IETKLHMWQISSGRLLATASSHYQPITIVKWSAD----SNFIVTGGEDGTICVWQLSR  150 (343)
Q Consensus        79 ~~v~~~~~s~~~~~l~-~~---~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~----~~~l~s~~~dg~i~iwd~~~  150 (343)
                      .++..++|. ||+.++ +.   .+|.+++=|   ...+..|    ..|..+.|.|-    ...+++......|.+|.+..
T Consensus        20 HPvhGlaWT-DGkqVvLT~L~l~~gE~kfGd---s~viGqF----EhV~GlsW~P~~~~~~paLLAVQHkkhVtVWqL~~   91 (671)
T PF15390_consen   20 HPVHGLAWT-DGKQVVLTDLQLHNGEPKFGD---SKVIGQF----EHVHGLSWAPPCTADTPALLAVQHKKHVTVWQLCP   91 (671)
T ss_pred             ccccceEec-CCCEEEEEeeeeeCCccccCC---ccEeecc----ceeeeeeecCcccCCCCceEEEeccceEEEEEecc
Confidence            468899998 665544 32   345554433   2233333    45899999983    33455566678999999863


Q ss_pred             cceeeeeecCCCCCCCCccccccceeeee-cccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCC--ceEEEeecCC
Q psy10867        151 LICKQTVAFGIPGSSGKGVTGLTEPLHVK-SQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTG--EDLLSLILDT  227 (343)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~--~~~~~~~~~~  227 (343)
                      ......--          .   ......+ ....--.....|+|..  ..|+.-.....-.+++++..  +....+...+
T Consensus        92 s~~e~~K~----------l---~sQtcEi~e~~pvLpQGCVWHPk~--~iL~VLT~~dvSV~~sV~~d~srVkaDi~~~G  156 (671)
T PF15390_consen   92 STTERNKL----------L---MSQTCEIREPFPVLPQGCVWHPKK--AILTVLTARDVSVLPSVHCDSSRVKADIKTSG  156 (671)
T ss_pred             Cccccccc----------e---eeeeeeccCCcccCCCcccccCCC--ceEEEEecCceeEeeeeeeCCceEEEeccCCc
Confidence            21111000          0   0000000 0011112456799987  56666665555555665533  3444555778


Q ss_pred             cEEEEEEcCCCCEEEEEc-CCCcEEEEEeec
Q psy10867        228 RLTCVAFDGTEDNIYMGT-SEGVIKSFCLRQ  257 (343)
Q Consensus       228 ~i~~~~~~~~~~~l~~~~-~d~~i~i~d~~~  257 (343)
                      .|.|.+|.+||+.|+++- ..=.-++||-..
T Consensus       157 ~IhCACWT~DG~RLVVAvGSsLHSyiWd~~q  187 (671)
T PF15390_consen  157 LIHCACWTKDGQRLVVAVGSSLHSYIWDSAQ  187 (671)
T ss_pred             eEEEEEecCcCCEEEEEeCCeEEEEEecCch
Confidence            899999999999888763 344567888654

>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases

Probab=96.48  E-value=0.39  Score=39.68  Aligned_cols=241  Identities=11%  Similarity=-0.032  Sum_probs=116.3

Q ss_pred             ceEEEEECCCCCEEEEecCCeEEEEEccCCce---EEEe----cccCCCeEEEEEecC----CCEEEEecCC--------
Q psy10867         80 RISSMQASPDAAYIAVSIETKLHMWQISSGRL---LATA----SSHYQPITIVKWSAD----SNFIVTGGED--------  140 (343)
Q Consensus        80 ~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~---~~~~----~~~~~~v~~~~~~~~----~~~l~s~~~d--------  140 (343)
                      ....|+|.|||+++++-..|.|++++ ..+..   +..+    .........++++|+    +.+.++.+..        
T Consensus         3 ~P~~~a~~pdG~l~v~e~~G~i~~~~-~~g~~~~~v~~~~~v~~~~~~gllgia~~p~f~~n~~lYv~~t~~~~~~~~~~   81 (331)
T PF07995_consen    3 NPRSMAFLPDGRLLVAERSGRIWVVD-KDGSLKTPVADLPEVFADGERGLLGIAFHPDFASNGYLYVYYTNADEDGGDND   81 (331)
T ss_dssp             SEEEEEEETTSCEEEEETTTEEEEEE-TTTEECEEEEE-TTTBTSTTBSEEEEEE-TTCCCC-EEEEEEEEE-TSSSSEE
T ss_pred             CceEEEEeCCCcEEEEeCCceEEEEe-CCCcCcceecccccccccccCCcccceeccccCCCCEEEEEEEcccCCCCCcc
Confidence            45789999999999998899999999 44443   2222    123456889999994    3333333311        


Q ss_pred             CeEEEeecCcc-ceeeeeecCCCCCCCCccccccceeeeecc---cccceEEEEeecCCCceEEEEeeCC----------
Q psy10867        141 GTICVWQLSRL-ICKQTVAFGIPGSSGKGVTGLTEPLHVKSQ---HSLPVTHVTLSKLGAKSRVASVSHD----------  206 (343)
Q Consensus       141 g~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~l~~~~~d----------  206 (343)
                      ..|.-|..... ......               ...+..+..   ....-..|.|.|++  .+.++.+..          
T Consensus        82 ~~v~r~~~~~~~~~~~~~---------------~~l~~~~p~~~~~~H~g~~l~fgpDG--~LYvs~G~~~~~~~~~~~~  144 (331)
T PF07995_consen   82 NRVVRFTLSDGDGDLSSE---------------EVLVTGLPDTSSGNHNGGGLAFGPDG--KLYVSVGDGGNDDNAQDPN  144 (331)
T ss_dssp             EEEEEEEEETTSCEEEEE---------------EEEEEEEES-CSSSS-EEEEEE-TTS--EEEEEEB-TTTGGGGCSTT
T ss_pred             eeeEEEeccCCccccccc---------------eEEEEEeCCCCCCCCCCccccCCCCC--cEEEEeCCCCCcccccccc
Confidence            23444444332 000000               011111111   23345679999999  666654443          


Q ss_pred             ---CeEEEEecCCCce-------------EEEee-cCCcEEEEEEcCC-CCEEEE-EcCCCcEEEEEeeccccc----cc
Q psy10867        207 ---RTCKIFDLCTGED-------------LLSLI-LDTRLTCVAFDGT-EDNIYM-GTSEGVIKSFCLRQVPRT----RD  263 (343)
Q Consensus       207 ---~~i~~wd~~~~~~-------------~~~~~-~~~~i~~~~~~~~-~~~l~~-~~~d~~i~i~d~~~~~~~----~~  263 (343)
                         |.|.-.+.. ++.             ...+. .-.....++|+|. +.+.++ -+.++.=.|--+.....-    ..
T Consensus       145 ~~~G~ilri~~d-G~~p~dnP~~~~~~~~~~i~A~GlRN~~~~~~d~~tg~l~~~d~G~~~~dein~i~~G~nYGWP~~~  223 (331)
T PF07995_consen  145 SLRGKILRIDPD-GSIPADNPFVGDDGADSEIYAYGLRNPFGLAFDPNTGRLWAADNGPDGWDEINRIEPGGNYGWPYCE  223 (331)
T ss_dssp             SSTTEEEEEETT-SSB-TTSTTTTSTTSTTTEEEE--SEEEEEEEETTTTEEEEEEE-SSSSEEEEEE-TT-B--TTTBS
T ss_pred             cccceEEEeccc-CcCCCCCccccCCCceEEEEEeCCCccccEEEECCCCcEEEEccCCCCCcEEEEeccCCcCCCCCCc
Confidence               233333321 110             00011 1223568999998 554443 122332222222222110    00


Q ss_pred             --------------ccccCCCCCCccccccCcEEEEEEcc-------CCCEEEEEeCCCcEEEEecccceeeee----cc
Q psy10867        264 --------------HHIQDSTSNPDFIGHEKQVTSLSCSI-------TGITLLSSSADETLKIWHTISRQCLRT----IQ  318 (343)
Q Consensus       264 --------------~~~~~~~~~~~~~~~~~~v~~~~~s~-------~~~~l~s~~~dg~i~iwd~~~~~~~~~----~~  318 (343)
                                    .......+...+..| ..+..+.|-.       .|.++++.-..+.|....+..+..+..    +.
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~P~~~~~~~-~ap~G~~~y~g~~fp~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  302 (331)
T PF07995_consen  224 GGPKYSGPPIGDAPSCPGFVPPVFAYPPH-SAPTGIIFYRGSAFPEYRGDLFVADYGGGRIWRLDLDEDGSVTEEEEFLG  302 (331)
T ss_dssp             SSCSTTSS-ECTGSS-TTS---SEEETTT---EEEEEEE-SSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEEECT
T ss_pred             CCCCCCCCccccccCCCCcCccceeecCc-cccCceEEECCccCccccCcEEEecCCCCEEEEEeeecCCCccceEEccc
Confidence                          000001123334433 5567777653       345666666667788877764432222    22


Q ss_pred             -cCCceEEEEEccCCCeeeeccc
Q psy10867        319 -HKGPVLGAFLGLLPPAIHDYDF  340 (343)
Q Consensus       319 -~~~~v~~~~~sp~~~~l~~~~~  340 (343)
                       ....+..+++.|||.+.++.+.
T Consensus       303 ~~~~r~~~v~~~pDG~Lyv~~d~  325 (331)
T PF07995_consen  303 GFGGRPRDVAQGPDGALYVSDDS  325 (331)
T ss_dssp             TSSS-EEEEEEETTSEEEEEE-T
T ss_pred             cCCCCceEEEEcCCCeEEEEECC
Confidence             3447999999999999887653

The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....

>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs

Probab=96.45  E-value=0.19  Score=45.82  Aligned_cols=72  Identities=15%  Similarity=0.228  Sum_probs=41.6

Q ss_pred             cccceEEEEeecCCCceEEEEeeCCCeEEEEecCC--C--------ce---EEEee---------cCCcEEEEEEcCC--
Q psy10867        182 HSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCT--G--------ED---LLSLI---------LDTRLTCVAFDGT--  237 (343)
Q Consensus       182 ~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~--~--------~~---~~~~~---------~~~~i~~~~~~~~--  237 (343)
                      -...|..+.++|+|  .+++..+..|...+ .+..  |        +.   .+++.         ....|..+.|+|.  
T Consensus        83 ~~f~v~~i~~n~~g--~~lal~G~~~v~V~-~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~  159 (717)
T PF10168_consen   83 PLFEVHQISLNPTG--SLLALVGPRGVVVL-ELPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSE  159 (717)
T ss_pred             CceeEEEEEECCCC--CEEEEEcCCcEEEE-EeccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCCC
Confidence            44578999999999  77887777654443 3321  1        11   01110         1224666666664  


Q ss_pred             -CCEEEEEcCCCcEEEEEee
Q psy10867        238 -EDNIYMGTSEGVIKSFCLR  256 (343)
Q Consensus       238 -~~~l~~~~~d~~i~i~d~~  256 (343)
                       +..|++-+.|+.+++||+.
T Consensus       160 ~~~~l~vLtsdn~lR~y~~~  179 (717)
T PF10168_consen  160 SDSHLVVLTSDNTLRLYDIS  179 (717)
T ss_pred             CCCeEEEEecCCEEEEEecC
Confidence             3566666666666666654

It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].

>KOG2247|consensus

Probab=96.45  E-value=0.00055  Score=56.63  Aligned_cols=140  Identities=14%  Similarity=0.058  Sum_probs=103.9

Q ss_pred             ceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEE-EcCCCcEEEEEeeccccccc
Q psy10867        185 PVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYM-GTSEGVIKSFCLRQVPRTRD  263 (343)
Q Consensus       185 ~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~-~~~d~~i~i~d~~~~~~~~~  263 (343)
                      ..-...|-|.+  .-++.++.+..+..|| +.++.......+.....++|+.++..+++ +...+.+++||+.+..... 
T Consensus        36 ~pi~~~w~~e~--~nlavaca~tiv~~YD-~agq~~le~n~tg~aldm~wDkegdvlavlAek~~piylwd~n~eytqq-  111 (615)
T KOG2247|consen   36 GPIIHRWRPEG--HNLAVACANTIVIYYD-KAGQVILELNPTGKALDMAWDKEGDVLAVLAEKTGPIYLWDVNSEYTQQ-  111 (615)
T ss_pred             ccceeeEecCC--CceehhhhhhHHHhhh-hhcceecccCCchhHhhhhhccccchhhhhhhcCCCeeechhhhhhHHH-
Confidence            33455677777  4588888899999999 56777666667777888899998876655 6678999999998743211 


Q ss_pred             ccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc-cCCceEEEEEccCCCeeeec
Q psy10867        264 HHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVLGAFLGLLPPAIHDY  338 (343)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~  338 (343)
                              +..-..|....  +.|++....++.+...|.+.|++..+.+.+.... |...+++++|.+.+..+...
T Consensus       112 --------LE~gg~~s~sl--l~wsKg~~el~ig~~~gn~viynhgtsR~iiv~Gkh~RRgtq~av~lEd~vil~d  177 (615)
T KOG2247|consen  112 --------LESGGTSSKSL--LAWSKGTPELVIGNNAGNIVIYNHGTSRRIIVMGKHQRRGTQIAVTLEDYVILCD  177 (615)
T ss_pred             --------HhccCcchHHH--HhhccCCccccccccccceEEEeccchhhhhhhcccccceeEEEecccceeeecC
Confidence                    11111122222  6789988899999999999999998877777777 88999999999998776544

>PF03022 MRJP: Major royal jelly protein; InterPro: IPR003534 The major royal jelly proteins (MRJPs) comprise 12

Probab=96.44  E-value=0.37  Score=38.84  Aligned_cols=179  Identities=10%  Similarity=0.046  Sum_probs=96.3

Q ss_pred             eEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCC----ceEEEEeeCCCeEEEEecCCC
Q psy10867        142 TICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGA----KSRVASVSHDRTCKIFDLCTG  217 (343)
Q Consensus       142 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~----~~~l~~~~~d~~i~~wd~~~~  217 (343)
                      +|.+||+.+.+..+.+.++...                ......+..+.+.....    ....++-+..+.|.++|+.++
T Consensus        35 KLv~~Dl~t~~li~~~~~p~~~----------------~~~~s~lndl~VD~~~~~~~~~~aYItD~~~~glIV~dl~~~   98 (287)
T PF03022_consen   35 KLVAFDLKTNQLIRRYPFPPDI----------------APPDSFLNDLVVDVRDGNCDDGFAYITDSGGPGLIVYDLATG   98 (287)
T ss_dssp             EEEEEETTTTCEEEEEE--CCC----------------S-TCGGEEEEEEECTTTTS-SEEEEEEETTTCEEEEEETTTT
T ss_pred             EEEEEECCCCcEEEEEECChHH----------------cccccccceEEEEccCCCCcceEEEEeCCCcCcEEEEEccCC
Confidence            6788899888877776543221                11345677777766321    123344444568999999987


Q ss_pred             ceEEEee--------------------cCCcEEEEEEcC---CCCEEEEEcCCCcEEEEEeecccc--ccccccc-CCCC
Q psy10867        218 EDLLSLI--------------------LDTRLTCVAFDG---TEDNIYMGTSEGVIKSFCLRQVPR--TRDHHIQ-DSTS  271 (343)
Q Consensus       218 ~~~~~~~--------------------~~~~i~~~~~~~---~~~~l~~~~~d~~i~i~d~~~~~~--~~~~~~~-~~~~  271 (343)
                      +..+...                    ....+..++.+|   +++.|+-....+. ++|.+.+...  ....... ....
T Consensus        99 ~s~Rv~~~~~~~~p~~~~~~i~g~~~~~~dg~~gial~~~~~d~r~LYf~~lss~-~ly~v~T~~L~~~~~~~~~~~~~~  177 (287)
T PF03022_consen   99 KSWRVLHNSFSPDPDAGPFTIGGESFQWPDGIFGIALSPISPDGRWLYFHPLSSR-KLYRVPTSVLRDPSLSDAQALASQ  177 (287)
T ss_dssp             EEEEEETCGCTTS-SSEEEEETTEEEEETTSEEEEEE-TTSTTS-EEEEEETT-S-EEEEEEHHHHCSTT--HHH-HHHT
T ss_pred             cEEEEecCCcceeccccceeccCceEecCCCccccccCCCCCCccEEEEEeCCCC-cEEEEEHHHhhCcccccccccccc
Confidence            7544332                    123366667765   6667776654332 3344333211  1100000 0001


Q ss_pred             CCcccccc-CcEEEEEEccCCCEEEEEeCCCcEEEEecccc---eeeeecc---c-CCceEEEEEcc--CCCeeeec
Q psy10867        272 NPDFIGHE-KQVTSLSCSITGITLLSSSADETLKIWHTISR---QCLRTIQ---H-KGPVLGAFLGL--LPPAIHDY  338 (343)
Q Consensus       272 ~~~~~~~~-~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~---~~~~~~~---~-~~~v~~~~~sp--~~~~l~~~  338 (343)
                      +..+ +.. .....++++++|.++++--..+.|..|+....   +....+.   . -..+.++.+.+  +|..-+.+
T Consensus       178 v~~l-G~k~~~s~g~~~D~~G~ly~~~~~~~aI~~w~~~~~~~~~~~~~l~~d~~~l~~pd~~~i~~~~~g~L~v~s  253 (287)
T PF03022_consen  178 VQDL-GDKGSQSDGMAIDPNGNLYFTDVEQNAIGCWDPDGPYTPENFEILAQDPRTLQWPDGLKIDPEGDGYLWVLS  253 (287)
T ss_dssp             -EEE-EE---SECEEEEETTTEEEEEECCCTEEEEEETTTSB-GCCEEEEEE-CC-GSSEEEEEE-T--TS-EEEEE
T ss_pred             ceec-cccCCCCceEEECCCCcEEEecCCCCeEEEEeCCCCcCccchheeEEcCceeeccceeeeccccCceEEEEE
Confidence            1111 222 35567889999999999999999999998751   1122222   2 45678999999  66654443

5% of the mass, and 82-90% of the protein content [], of honeybee (Apis mellifera) royal jelly. Royal jelly is a substance secreted by the cephalic glands of nurse bees [] and it is used to trigger development of a queen bee from a bee larva. The biological function of the MRJPs is unknown, but they are believed to play a major role in nutrition due to their high essential amino acid content []. Two royal jelly proteins, MRJP3 and MRJP5, contain a tandem repeat that results from a high genetic variablility. This polymorphism may be useful for genotyping individual bees [].; PDB: 3Q6P_B 3Q6K_A 3Q6T_A 2QE8_B.

>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A

Probab=96.43  E-value=0.37  Score=38.89  Aligned_cols=262  Identities=11%  Similarity=-0.033  Sum_probs=120.9

Q ss_pred             cceEEEEeCCceEEEEEcCCCeEEEEeCCC-cccceecc-cC----CcceEEEEECCCCCEEEEecCCeEEEEEccCCce
Q psy10867         38 SPHSMCLLGNDYVLGVEKGKPMIQAWPVNS-QEKAQLRL-IC----PGRISSMQASPDAAYIAVSIETKLHMWQISSGRL  111 (343)
Q Consensus        38 ~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~-~~~~~~~~-~~----~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~  111 (343)
                      .+..|.|..+..-.++|.. +.|  +...+ ++.=.... ..    .-....+.|.. ...++++..+. .+...+.|+.
T Consensus        18 ~l~dV~F~d~~~G~~VG~~-g~i--l~T~DGG~tW~~~~~~~~~~~~~~l~~I~f~~-~~g~ivG~~g~-ll~T~DgG~t   92 (302)
T PF14870_consen   18 PLLDVAFVDPNHGWAVGAY-GTI--LKTTDGGKTWQPVSLDLDNPFDYHLNSISFDG-NEGWIVGEPGL-LLHTTDGGKT   92 (302)
T ss_dssp             -EEEEEESSSS-EEEEETT-TEE--EEESSTTSS-EE-----S-----EEEEEEEET-TEEEEEEETTE-EEEESSTTSS
T ss_pred             ceEEEEEecCCEEEEEecC-CEE--EEECCCCccccccccCCCccceeeEEEEEecC-CceEEEcCCce-EEEecCCCCC
Confidence            8899999876677777776 543  33332 22111111 11    22466788864 34555666664 3333344443


Q ss_pred             EEEec---ccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEE
Q psy10867        112 LATAS---SHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTH  188 (343)
Q Consensus       112 ~~~~~---~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  188 (343)
                      -..+.   .-.+....+....++..++.+ ..|.|  |....+-...                  +  .........+..
T Consensus        93 W~~v~l~~~lpgs~~~i~~l~~~~~~l~~-~~G~i--y~T~DgG~tW------------------~--~~~~~~~gs~~~  149 (302)
T PF14870_consen   93 WERVPLSSKLPGSPFGITALGDGSAELAG-DRGAI--YRTTDGGKTW------------------Q--AVVSETSGSIND  149 (302)
T ss_dssp             -EE----TT-SS-EEEEEEEETTEEEEEE-TT--E--EEESSTTSSE------------------E--EEE-S----EEE
T ss_pred             cEEeecCCCCCCCeeEEEEcCCCcEEEEc-CCCcE--EEeCCCCCCe------------------e--EcccCCcceeEe
Confidence            32221   122334445444444444443 33543  3322221111                  1  112234467888


Q ss_pred             EEeecCCCceEEEEeeCCCeEEEEecCCCc-eEEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeeccccccccccc
Q psy10867        189 VTLSKLGAKSRVASVSHDRTCKIFDLCTGE-DLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQ  267 (343)
Q Consensus       189 ~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~-~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~  267 (343)
                      +..++++  .++++++.-....-||--... ..........+..+.|.|++...+++ ..|.|++=+.........    
T Consensus       150 ~~r~~dG--~~vavs~~G~~~~s~~~G~~~w~~~~r~~~~riq~~gf~~~~~lw~~~-~Gg~~~~s~~~~~~~~w~----  222 (302)
T PF14870_consen  150 ITRSSDG--RYVAVSSRGNFYSSWDPGQTTWQPHNRNSSRRIQSMGFSPDGNLWMLA-RGGQIQFSDDPDDGETWS----  222 (302)
T ss_dssp             EEE-TTS---EEEEETTSSEEEEE-TT-SS-EEEE--SSS-EEEEEE-TTS-EEEEE-TTTEEEEEE-TTEEEEE-----
T ss_pred             EEECCCC--cEEEEECcccEEEEecCCCccceEEccCccceehhceecCCCCEEEEe-CCcEEEEccCCCCccccc----
Confidence            8889998  778777666666778743221 22222356789999999998776655 788888776111111000    


Q ss_pred             CCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc----cCCceEEEEEccCCCeeeec
Q psy10867        268 DSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ----HKGPVLGAFLGLLPPAIHDY  338 (343)
Q Consensus       268 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~----~~~~v~~~~~sp~~~~l~~~  338 (343)
                        +.+.........+..++|.+++...|+|+. |.+. .....|+.-..-+    ....+..+.|.++.+-++.+
T Consensus       223 --~~~~~~~~~~~~~ld~a~~~~~~~wa~gg~-G~l~-~S~DgGktW~~~~~~~~~~~n~~~i~f~~~~~gf~lG  293 (302)
T PF14870_consen  223 --EPIIPIKTNGYGILDLAYRPPNEIWAVGGS-GTLL-VSTDGGKTWQKDRVGENVPSNLYRIVFVNPDKGFVLG  293 (302)
T ss_dssp             ----B-TTSS--S-EEEEEESSSS-EEEEEST-T-EE-EESSTTSS-EE-GGGTTSSS---EEEEEETTEEEEE-
T ss_pred             --cccCCcccCceeeEEEEecCCCCEEEEeCC-ccEE-EeCCCCccceECccccCCCCceEEEEEcCCCceEEEC
Confidence              001112222344889999998877776654 4443 3444554433332    35568888887776666554

>PF02333 Phytase: Phytase; InterPro: IPR003431 Phytase (3

Probab=96.36  E-value=0.48  Score=39.39  Aligned_cols=205  Identities=11%  Similarity=0.132  Sum_probs=111.8

Q ss_pred             CCEEE-EecCCeEEEEEccCCceEEEecccCCCeEEEEEec----CCCE--EEEec-CC---CeEEEeecCccc-eeeee
Q psy10867         90 AAYIA-VSIETKLHMWQISSGRLLATASSHYQPITIVKWSA----DSNF--IVTGG-ED---GTICVWQLSRLI-CKQTV  157 (343)
Q Consensus        90 ~~~l~-~~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~~--l~s~~-~d---g~i~iwd~~~~~-~~~~~  157 (343)
                      ..+++ +..++-+.+||+. |+.++.+.  .+....+....    +++.  |+.++ .+   ..|++|.+.... ....+
T Consensus        68 kSlIigTdK~~GL~VYdL~-Gk~lq~~~--~Gr~NNVDvrygf~l~g~~vDlavas~R~~g~n~l~~f~id~~~g~L~~v  144 (381)
T PF02333_consen   68 KSLIIGTDKKGGLYVYDLD-GKELQSLP--VGRPNNVDVRYGFPLNGKTVDLAVASDRSDGRNSLRLFRIDPDTGELTDV  144 (381)
T ss_dssp             G-EEEEEETTTEEEEEETT-S-EEEEE---SS-EEEEEEEEEEEETTEEEEEEEEEE-CCCT-EEEEEEEETTTTEEEE-
T ss_pred             cceEEEEeCCCCEEEEcCC-CcEEEeec--CCCcceeeeecceecCCceEEEEEEecCcCCCCeEEEEEecCCCCcceEc
Confidence            34555 4678899999985 66667664  23444444321    3432  34443 22   469999876321 11111


Q ss_pred             ecCCCCCCCCccccccceeeeecccccceEEEEeec--CCCceEEEEeeCCCeEEEEecC---CC----ceEEEeecCCc
Q psy10867        158 AFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSK--LGAKSRVASVSHDRTCKIFDLC---TG----EDLLSLILDTR  228 (343)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~l~~~~~d~~i~~wd~~---~~----~~~~~~~~~~~  228 (343)
                      .            ....+   +......++.+|+..  .....+++....+|.+..|.+.   .+    +.++++...+.
T Consensus       145 ~------------~~~~p---~~~~~~e~yGlcly~~~~~g~~ya~v~~k~G~~~Qy~L~~~~~g~v~~~lVR~f~~~sQ  209 (381)
T PF02333_consen  145 T------------DPAAP---IATDLSEPYGLCLYRSPSTGALYAFVNGKDGRVEQYELTDDGDGKVSATLVREFKVGSQ  209 (381)
T ss_dssp             C------------BTTC----EE-SSSSEEEEEEEE-TTT--EEEEEEETTSEEEEEEEEE-TTSSEEEEEEEEEE-SS-
T ss_pred             C------------CCCcc---cccccccceeeEEeecCCCCcEEEEEecCCceEEEEEEEeCCCCcEeeEEEEEecCCCc
Confidence            0            00001   111223467788753  2222577778889988888764   23    45788888889


Q ss_pred             EEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCcc--ccccCcEEEEEEc--cCCC-EE-EEEeCCCc
Q psy10867        229 LTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDF--IGHEKQVTSLSCS--ITGI-TL-LSSSADET  302 (343)
Q Consensus       229 i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~s--~~~~-~l-~s~~~dg~  302 (343)
                      +..+.......+|+.+-.+.-|.-|+.+.........      +...  ......|-.|++-  ++++ || +|.-.+++
T Consensus       210 ~EGCVVDDe~g~LYvgEE~~GIW~y~Aep~~~~~~~~------v~~~~g~~l~aDvEGlaly~~~~g~gYLivSsQG~~s  283 (381)
T PF02333_consen  210 PEGCVVDDETGRLYVGEEDVGIWRYDAEPEGGNDRTL------VASADGDGLVADVEGLALYYGSDGKGYLIVSSQGDNS  283 (381)
T ss_dssp             EEEEEEETTTTEEEEEETTTEEEEEESSCCC-S--EE------EEEBSSSSB-S-EEEEEEEE-CCC-EEEEEEEGGGTE
T ss_pred             ceEEEEecccCCEEEecCccEEEEEecCCCCCCccee------eecccccccccCccceEEEecCCCCeEEEEEcCCCCe
Confidence            9999999999999999999888777776432211110      1111  1234567777763  3443 44 45556778


Q ss_pred             EEEEeccc-ceeeeecc
Q psy10867        303 LKIWHTIS-RQCLRTIQ  318 (343)
Q Consensus       303 i~iwd~~~-~~~~~~~~  318 (343)
                      ..+|+.+. ...+..|.
T Consensus       284 f~Vy~r~~~~~~~g~f~  300 (381)
T PF02333_consen  284 FAVYDREGPNAYVGSFR  300 (381)
T ss_dssp             EEEEESSTT--EEEEEE
T ss_pred             EEEEecCCCCcccceEE
Confidence            99999874 35555554

1.3.8 from EC) (phytate 3-phosphatase) is a secreted enzyme which hydrolyses phytate to release inorganic phosphate. This family appears to represent a novel enzyme that shows phytase activity () and has been shown to consist of a single structural unit with a six-bladed propeller folding architecture ().; GO: 0016158 3-phytase activity; PDB: 3AMS_A 3AMR_A 1QLG_A 2POO_A 1H6L_A 1CVM_A 1POO_A.

>COG1520 FOG: WD40-like repeat [Function unknown]

Probab=96.33  E-value=0.53  Score=39.66  Aligned_cols=199  Identities=15%  Similarity=0.030  Sum_probs=110.8

Q ss_pred             ceEEEecCCCCeEEEEecCCceEEEEEecCC--CCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCC-cce
Q psy10867          5 NEVAFSYDGSGAISVWEPKGGTLLMSYKGAS--VLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICP-GRI   81 (343)
Q Consensus         5 ~~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~-~~v   81 (343)
                      ...+|.+..+|.|.-.|.++++.+.......  . .+.+-.+..+|+++++..+ +.+..+|..+++......... ..+
T Consensus        68 dg~v~~~~~~G~i~A~d~~~g~~~W~~~~~~~~~-~~~~~~~~~~G~i~~g~~~-g~~y~ld~~~G~~~W~~~~~~~~~~  145 (370)
T COG1520          68 DGTVYVGTRDGNIFALNPDTGLVKWSYPLLGAVA-QLSGPILGSDGKIYVGSWD-GKLYALDASTGTLVWSRNVGGSPYY  145 (370)
T ss_pred             CCeEEEecCCCcEEEEeCCCCcEEecccCcCcce-eccCceEEeCCeEEEeccc-ceEEEEECCCCcEEEEEecCCCeEE
Confidence            3455666677888888888888765444332  2 3333344448886666666 888888988888775444333 112


Q ss_pred             EEEEECCCCCEEEEecCCeEEEEEccCCceEEEecccC---CCeEEEEEecCCCEEEEecC--CCeEEEeecCccceeee
Q psy10867         82 SSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHY---QPITIVKWSADSNFIVTGGE--DGTICVWQLSRLICKQT  156 (343)
Q Consensus        82 ~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~l~s~~~--dg~i~iwd~~~~~~~~~  156 (343)
                      ..-..-.++..+..+.++.+.-.+..+|+.+-......   ..+..-... ....++.+..  ++.+.-.|..++.....
T Consensus       146 ~~~~v~~~~~v~~~s~~g~~~al~~~tG~~~W~~~~~~~~~~~~~~~~~~-~~~~vy~~~~~~~~~~~a~~~~~G~~~w~  224 (370)
T COG1520         146 ASPPVVGDGTVYVGTDDGHLYALNADTGTLKWTYETPAPLSLSIYGSPAI-ASGTVYVGSDGYDGILYALNAEDGTLKWS  224 (370)
T ss_pred             ecCcEEcCcEEEEecCCCeEEEEEccCCcEEEEEecCCccccccccCcee-ecceEEEecCCCcceEEEEEccCCcEeee
Confidence            22222234555555567888888888887766543221   111110111 2334444544  56677777777766554


Q ss_pred             eecCCCCCCCCccccccceeeeecccc-----cceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecC
Q psy10867        157 VAFGIPGSSGKGVTGLTEPLHVKSQHS-----LPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILD  226 (343)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~  226 (343)
                      ....                 ...+..     ..+..-...-++   -+..++.++.+...|..+++.+..+...
T Consensus       225 ~~~~-----------------~~~~~~~~~~~~~~~~~~v~v~~---~~~~~~~~g~~~~l~~~~G~~~W~~~~~  279 (370)
T COG1520         225 QKVS-----------------QTIGRTAISTTPAVDGGPVYVDG---GVYAGSYGGKLLCLDADTGELIWSFPAG  279 (370)
T ss_pred             eeee-----------------cccCcccccccccccCceEEECC---cEEEEecCCeEEEEEcCCCceEEEEecc
Confidence            3210                 000000     011111111122   3466777888999999999999888764

>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain

Probab=96.23  E-value=0.6  Score=39.27  Aligned_cols=147  Identities=6%  Similarity=-0.086  Sum_probs=78.6

Q ss_pred             cceEEEEECCCCCEEEEec------------CC-eEEEEEccC--Cc--eEEEecccCCCeEEEEEecCCCEEEEecCCC
Q psy10867         79 GRISSMQASPDAAYIAVSI------------ET-KLHMWQISS--GR--LLATASSHYQPITIVKWSADSNFIVTGGEDG  141 (343)
Q Consensus        79 ~~v~~~~~s~~~~~l~~~~------------d~-~i~v~~~~~--~~--~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg  141 (343)
                      .....|+|.++|+++++..            .+ .|.+++-.+  |+  ....+.........+++.+++ +++ +....
T Consensus        14 ~~P~~ia~d~~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~l~~p~Gi~~~~~G-lyV-~~~~~   91 (367)
T TIGR02604        14 RNPIAVCFDERGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEELSMVTGLAVAVGG-VYV-ATPPD   91 (367)
T ss_pred             CCCceeeECCCCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecCCCCccceeEecCC-EEE-eCCCe
Confidence            3457889999999888742            22 677776443  32  223343334456889999888 444 44443


Q ss_pred             eEEEeecCccceee-eeecCCCCCCCCccccccceeeeecc----cccceEEEEeecCCCceEEEEeeC-----------
Q psy10867        142 TICVWQLSRLICKQ-TVAFGIPGSSGKGVTGLTEPLHVKSQ----HSLPVTHVTLSKLGAKSRVASVSH-----------  205 (343)
Q Consensus       142 ~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~l~~~~~-----------  205 (343)
                      ..++.|........ ..               ......+..    +......++|.|++  .+.++-+.           
T Consensus        92 i~~~~d~~gdg~ad~~~---------------~~l~~~~~~~~~~~~~~~~~l~~gpDG--~LYv~~G~~~~~~~~~~~~  154 (367)
T TIGR02604        92 ILFLRDKDGDDKADGER---------------EVLLSGFGGQINNHHHSLNSLAWGPDG--WLYFNHGNTLASKVTRPGT  154 (367)
T ss_pred             EEEEeCCCCCCCCCCcc---------------EEEEEccCCCCCcccccccCceECCCC--CEEEecccCCCceeccCCC
Confidence            33333443211000 00               001111111    23447789999998  55554331           


Q ss_pred             --------CCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCCEEEEEc
Q psy10867        206 --------DRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIYMGT  245 (343)
Q Consensus       206 --------d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~  245 (343)
                              .|.|.-+|...++. ..+. .......++|+|+|+++++-.
T Consensus       155 ~~~~~~~~~g~i~r~~pdg~~~-e~~a~G~rnp~Gl~~d~~G~l~~tdn  202 (367)
T TIGR02604       155 SDESRQGLGGGLFRYNPDGGKL-RVVAHGFQNPYGHSVDSWGDVFFCDN  202 (367)
T ss_pred             ccCcccccCceEEEEecCCCeE-EEEecCcCCCccceECCCCCEEEEcc
Confidence                    14455566554432 2222 233467899999998877644

All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.

>KOG4460|consensus

Probab=96.09  E-value=0.36  Score=41.19  Aligned_cols=29  Identities=28%  Similarity=0.153  Sum_probs=22.1

Q ss_pred             ccceEEEEeecCCCceEEEEeeCCCeEEEEe
Q psy10867        183 SLPVTHVTLSKLGAKSRVASVSHDRTCKIFD  213 (343)
Q Consensus       183 ~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd  213 (343)
                      .-.|..+..++.|  ..++.++.+|.+.++=
T Consensus       103 ~feV~~vl~s~~G--S~VaL~G~~Gi~vMeL  131 (741)
T KOG4460|consen  103 LFEVYQVLLSPTG--SHVALIGIKGLMVMEL  131 (741)
T ss_pred             eEEEEEEEecCCC--ceEEEecCCeeEEEEc
Confidence            3457788889998  7888888888776653

>KOG2377|consensus

Probab=96.03  E-value=0.77  Score=38.64  Aligned_cols=116  Identities=10%  Similarity=0.096  Sum_probs=78.0

Q ss_pred             CCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCccccee----cccCCcceEEEEECCCCCEEEEecCCeEEEEEccCC
Q psy10867         34 ASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQL----RLICPGRISSMQASPDAAYIAVSIETKLHMWQISSG  109 (343)
Q Consensus        34 ~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~----~~~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~  109 (343)
                      .++ +|.++.|++|.+++|.-..+.+|.+++....+....    -......|....|+.+ .-+|.-.+..+.+|.....
T Consensus        65 d~G-~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~~l~~~~~ck~k~~~IlGF~W~~s-~e~A~i~~~G~e~y~v~pe  142 (657)
T KOG2377|consen   65 DKG-EIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNSQLEYTQECKTKNANILGFCWTSS-TEIAFITDQGIEFYQVLPE  142 (657)
T ss_pred             CCC-ceeEEEeccCcceEEEEecCceEEEEecCCCchhhHHHHHhccCcceeEEEEEecC-eeEEEEecCCeEEEEEchh
Confidence            345 899999999999999999889999999855443321    2233456899999865 5555544555667765433


Q ss_pred             -ceEEEecccCCCeEEEEEecCCCEEEEec--CCCeEEEeecCcc
Q psy10867        110 -RLLATASSHYQPITIVKWSADSNFIVTGG--EDGTICVWQLSRL  151 (343)
Q Consensus       110 -~~~~~~~~~~~~v~~~~~~~~~~~l~s~~--~dg~i~iwd~~~~  151 (343)
                       +.++..+.|.-.|.--.|.++.+.++-++  ..+.+.=+.++++
T Consensus       143 krslRlVks~~~nvnWy~yc~et~v~LL~t~~~~n~lnpf~~~~~  187 (657)
T KOG2377|consen  143 KRSLRLVKSHNLNVNWYMYCPETAVILLSTTVLENVLNPFHFRAG  187 (657)
T ss_pred             hhhhhhhhhcccCccEEEEccccceEeeeccccccccccEEEeec
Confidence             44556677888899999999877544333  3444444444443

>PF14727 PHTB1_N: PTHB1 N-terminus

Probab=95.97  E-value=0.86  Score=38.69  Aligned_cols=279  Identities=14%  Similarity=0.122  Sum_probs=137.7

Q ss_pred             eEEEecCCCCeEEEEecCCce-----EEEEEecCCCCcceEEEEeC-----CceEEEEEcCCCeEEEEeCCCc--c----
Q psy10867          6 EVAFSYDGSGAISVWEPKGGT-----LLMSYKGASVLSPHSMCLLG-----NDYVLGVEKGKPMIQAWPVNSQ--E----   69 (343)
Q Consensus         6 ~~~~s~~~dg~i~iwd~~~~~-----~~~~~~~~~~~~v~~~~~~~-----~~~~~~~~~~~~~i~iw~~~~~--~----   69 (343)
                      ..++.++-+|.++|++...++     .+.+.+-. . +|..++.-+     +...+|.-.. ..+.+|.+...  .    
T Consensus        38 d~IivGS~~G~LrIy~P~~~~~~~~~lllE~~l~-~-PILqv~~G~F~s~~~~~~LaVLhP-~kl~vY~v~~~~g~~~~g  114 (418)
T PF14727_consen   38 DKIIVGSYSGILRIYDPSGNEFQPEDLLLETQLK-D-PILQVECGKFVSGSEDLQLAVLHP-RKLSVYSVSLVDGTVEHG  114 (418)
T ss_pred             cEEEEeccccEEEEEccCCCCCCCccEEEEEecC-C-cEEEEEeccccCCCCcceEEEecC-CEEEEEEEEecCCCcccC
Confidence            456778889999999986533     22222222 2 676666532     3356666555 78888887321  1    


Q ss_pred             ---cceecccCCc--ceEEEEECC----C-CCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEec
Q psy10867         70 ---KAQLRLICPG--RISSMQASP----D-AAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGG  138 (343)
Q Consensus        70 ---~~~~~~~~~~--~v~~~~~s~----~-~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~  138 (343)
                         .+.....|.-  ....+..-|    . ..++++ +.||.+.+|+-+.-.....+.. .--.-.+.|.+..+.|++++
T Consensus       115 ~~~~L~~~yeh~l~~~a~nm~~G~Fgg~~~~~~IcVQS~DG~L~~feqe~~~f~~~lp~-~llPgPl~Y~~~tDsfvt~s  193 (418)
T PF14727_consen  115 NQYQLELIYEHSLQRTAYNMCCGPFGGVKGRDFICVQSMDGSLSFFEQESFAFSRFLPD-FLLPGPLCYCPRTDSFVTAS  193 (418)
T ss_pred             cEEEEEEEEEEecccceeEEEEEECCCCCCceEEEEEecCceEEEEeCCcEEEEEEcCC-CCCCcCeEEeecCCEEEEec
Confidence               1111222221  222233222    2 245555 8999999999654443444443 22223578888888999999


Q ss_pred             CCCeEEEeecCccceeeeeecCCCCCCCCc-cccccceeeeecccccceEEEEeec---CCCceEEEEeeCCCeEEEEec
Q psy10867        139 EDGTICVWQLSRLICKQTVAFGIPGSSGKG-VTGLTEPLHVKSQHSLPVTHVTLSK---LGAKSRVASVSHDRTCKIFDL  214 (343)
Q Consensus       139 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~~~l~~~~~d~~i~~wd~  214 (343)
                      .+..+.-|...................... ......+.-.+ .-...+..+....   ..  ..++.-+ ...+.+.+-
T Consensus       194 ss~~l~~Yky~~La~~s~~~~~~~~~~~~~~~~k~l~~dWs~-nlGE~~l~i~v~~~~~~~--~~IvvLg-er~Lf~l~~  269 (418)
T PF14727_consen  194 SSWTLECYKYQDLASASEASSRQSGTEQDISSGKKLNPDWSF-NLGEQALDIQVVRFSSSE--SDIVVLG-ERSLFCLKD  269 (418)
T ss_pred             CceeEEEecHHHhhhccccccccccccccccccccccceeEE-ECCceeEEEEEEEcCCCC--ceEEEEe-cceEEEEcC
Confidence            988998887644321111000000000000 00000010011 1122333333322   22  2233332 356666663


Q ss_pred             CCCceEEEeecCCcEEEEEE-------cCCC-CEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEE
Q psy10867        215 CTGEDLLSLILDTRLTCVAF-------DGTE-DNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLS  286 (343)
Q Consensus       215 ~~~~~~~~~~~~~~i~~~~~-------~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  286 (343)
                       +|+.....+.+....+++.       .|+. ..+++++.++.+.||.=.+..  .           ..+....+| ++.
T Consensus       270 -~G~l~~~krLd~~p~~~~~Y~~~~~~~~~~~~~llV~t~t~~LlVy~d~~L~--W-----------sA~l~~~PV-al~  334 (418)
T PF14727_consen  270 -NGSLRFQKRLDYNPSCFCPYRVPWYNEPSTRLNLLVGTHTGTLLVYEDTTLV--W-----------SAQLPHVPV-ALS  334 (418)
T ss_pred             -CCeEEEEEecCCceeeEEEEEeecccCCCCceEEEEEecCCeEEEEeCCeEE--E-----------ecCCCCCCE-EEE
Confidence             5666555555554444331       1121 258889999999998533211  0           000011122 222


Q ss_pred             ---EccCCCEEEEEeCCCcEEEEe
Q psy10867        287 ---CSITGITLLSSSADETLKIWH  307 (343)
Q Consensus       287 ---~s~~~~~l~s~~~dg~i~iwd  307 (343)
                         |..-...|++-+.+|.+.+-=
T Consensus       335 v~~~~~~~G~IV~Ls~~G~L~v~Y  358 (418)
T PF14727_consen  335 VANFNGLKGLIVSLSDEGQLSVSY  358 (418)
T ss_pred             ecccCCCCceEEEEcCCCcEEEEE
Confidence               223345777888888877653

>KOG1900|consensus

Probab=95.89  E-value=0.2  Score=47.44  Aligned_cols=136  Identities=16%  Similarity=0.199  Sum_probs=89.5

Q ss_pred             CCeEEEEecCCceEEEEEecCCCCcceEEEEe-C--C------ceEEEEEcCCCeEEEEeCCCcccc---ee------cc
Q psy10867         14 SGAISVWEPKGGTLLMSYKGASVLSPHSMCLL-G--N------DYVLGVEKGKPMIQAWPVNSQEKA---QL------RL   75 (343)
Q Consensus        14 dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~-~--~------~~~~~~~~~~~~i~iw~~~~~~~~---~~------~~   75 (343)
                      |+.+.+|+.+++.....+.+-.. .|..+..- |  +      ..+++.+.. -.|.++-+.-.+..   ..      ..
T Consensus        98 Dn~L~lWny~~~~e~~~~d~~sh-tIl~V~LvkPkpgvFv~~IqhlLvvaT~-~ei~ilgV~~~~~~~~~~~f~~~~~i~  175 (1311)
T KOG1900|consen   98 DNNLFLWNYESDNELAEYDGLSH-TILKVGLVKPKPGVFVPEIQHLLVVATP-VEIVILGVSFDEFTGELSIFNTSFKIS  175 (1311)
T ss_pred             CCeEEEEEcCCCCccccccchhh-hheeeeeecCCCCcchhhhheeEEeccc-ceEEEEEEEeccccCcccccccceeee
Confidence            67899999999888888887666 66666543 2  1      245555554 45666644322111   11      11


Q ss_pred             cCCcceEEEEECCCCCEEEEecCCeEEEE--EccCC---c-e----------------EEEec-ccCCCeEEEEEecCCC
Q psy10867         76 ICPGRISSMQASPDAAYIAVSIETKLHMW--QISSG---R-L----------------LATAS-SHYQPITIVKWSADSN  132 (343)
Q Consensus        76 ~~~~~v~~~~~s~~~~~l~~~~d~~i~v~--~~~~~---~-~----------------~~~~~-~~~~~v~~~~~~~~~~  132 (343)
                      .....|.++....+|+.+.+|.||.|+=.  ...+|   + +                +..+. .+.++|..+.....-+
T Consensus       176 ~dg~~V~~I~~t~nGRIF~~G~dg~lyEl~Yq~~~gWf~~rc~Kiclt~s~ls~lvPs~~~~~~~~~dpI~qi~ID~SR~  255 (1311)
T KOG1900|consen  176 VDGVSVNCITYTENGRIFFAGRDGNLYELVYQAEDGWFGSRCRKICLTKSVLSSLVPSLLSVPGSSKDPIRQITIDNSRN  255 (1311)
T ss_pred             cCCceEEEEEeccCCcEEEeecCCCEEEEEEeccCchhhcccccccCchhHHHHhhhhhhcCCCCCCCcceeeEeccccc
Confidence            22456889998889999999999844322  21211   1 1                11122 5677999999988888


Q ss_pred             EEEEecCCCeEEEeecCcc
Q psy10867        133 FIVTGGEDGTICVWQLSRL  151 (343)
Q Consensus       133 ~l~s~~~dg~i~iwd~~~~  151 (343)
                      .+.+-+..|+|.+||+...
T Consensus       256 IlY~lsek~~v~~Y~i~~~  274 (1311)
T KOG1900|consen  256 ILYVLSEKGTVSAYDIGGN  274 (1311)
T ss_pred             eeeeeccCceEEEEEccCC
Confidence            8999999999999999873

>COG4257 Vgb Streptogramin lyase [Defense mechanisms]

Probab=95.86  E-value=0.64  Score=36.34  Aligned_cols=227  Identities=12%  Similarity=0.068  Sum_probs=137.9

Q ss_pred             ceEEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecc---cCCcce
Q psy10867          5 NEVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRL---ICPGRI   81 (343)
Q Consensus         5 ~~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~---~~~~~v   81 (343)
                      ..+-|+.++.|.|--.|..+|+...---+... ....+..-|||..-++-... -|.-.|-++.+..+...   ......
T Consensus        73 G~VWft~qg~gaiGhLdP~tGev~~ypLg~Ga-~Phgiv~gpdg~~Witd~~~-aI~R~dpkt~evt~f~lp~~~a~~nl  150 (353)
T COG4257          73 GAVWFTAQGTGAIGHLDPATGEVETYPLGSGA-SPHGIVVGPDGSAWITDTGL-AIGRLDPKTLEVTRFPLPLEHADANL  150 (353)
T ss_pred             CceEEecCccccceecCCCCCceEEEecCCCC-CCceEEECCCCCeeEecCcc-eeEEecCcccceEEeecccccCCCcc
Confidence            34667777777887788888887665555555 78889999998666665542 45556666665443221   234568


Q ss_pred             EEEEECCCCCEEEEecCCeEEEEEccCCceEEEeccc-CCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecC
Q psy10867         82 SSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSH-YQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFG  160 (343)
Q Consensus        82 ~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~  160 (343)
                      ....|.+.|++-.++..|.---.|... ..+..+... ...-+.|+..|+|..-++.-.+..|-..|..++...      
T Consensus       151 et~vfD~~G~lWFt~q~G~yGrLdPa~-~~i~vfpaPqG~gpyGi~atpdGsvwyaslagnaiaridp~~~~ae------  223 (353)
T COG4257         151 ETAVFDPWGNLWFTGQIGAYGRLDPAR-NVISVFPAPQGGGPYGICATPDGSVWYASLAGNAIARIDPFAGHAE------  223 (353)
T ss_pred             cceeeCCCccEEEeeccccceecCccc-CceeeeccCCCCCCcceEECCCCcEEEEeccccceEEcccccCCcc------
Confidence            888999999988876544332333222 223333322 234578899999998888777778888777665211      


Q ss_pred             CCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeec---CCcEEEEEEcCC
Q psy10867        161 IPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLIL---DTRLTCVAFDGT  237 (343)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~---~~~i~~~~~~~~  237 (343)
                                    .+..-......-..+-.+|.+  ..-++....+.+..+|..... -.++..   ...-.++.....
T Consensus       224 --------------v~p~P~~~~~gsRriwsdpig--~~wittwg~g~l~rfdPs~~s-W~eypLPgs~arpys~rVD~~  286 (353)
T COG4257         224 --------------VVPQPNALKAGSRRIWSDPIG--RAWITTWGTGSLHRFDPSVTS-WIEYPLPGSKARPYSMRVDRH  286 (353)
T ss_pred             --------------eecCCCcccccccccccCccC--cEEEeccCCceeeEeCccccc-ceeeeCCCCCCCcceeeeccC
Confidence                          111111222334445556666  666776677888888865443 333332   334566666666


Q ss_pred             CCEEEEEcCCCcEEEEEeec
Q psy10867        238 EDNIYMGTSEGVIKSFCLRQ  257 (343)
Q Consensus       238 ~~~l~~~~~d~~i~i~d~~~  257 (343)
                      ++.-++-...|.|.-||-++
T Consensus       287 grVW~sea~agai~rfdpet  306 (353)
T COG4257         287 GRVWLSEADAGAIGRFDPET  306 (353)
T ss_pred             CcEEeeccccCceeecCccc
Confidence            66555544556666666554

>KOG1916|consensus

Probab=95.84  E-value=0.027  Score=50.72  Aligned_cols=104  Identities=15%  Similarity=0.150  Sum_probs=67.5

Q ss_pred             CeEEEEecC--CceEEEEEecC----CCCcceEEEEe---CCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEE
Q psy10867         15 GAISVWEPK--GGTLLMSYKGA----SVLSPHSMCLL---GNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQ   85 (343)
Q Consensus        15 g~i~iwd~~--~~~~~~~~~~~----~~~~v~~~~~~---~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~   85 (343)
                      |.+.||++.  .|+....+..+    .+..+.-+.|.   ++..++..+.+++.+++.+.+.... ..+..|...+..++
T Consensus       153 g~lfVy~vd~l~G~iq~~l~v~~~~p~gs~~~~V~wcp~~~~~~~ic~~~~~~~i~lL~~~ra~~-~l~rsHs~~~~d~a  231 (1283)
T KOG1916|consen  153 GELFVYDVDVLQGEIQPQLEVTPITPYGSDPQLVSWCPIAVNKVYICYGLKGGEIRLLNINRALR-SLFRSHSQRVTDMA  231 (1283)
T ss_pred             hhhheeehHhhccccccceEEeecCcCCCCcceeeecccccccceeeeccCCCceeEeeechHHH-HHHHhcCCCcccHH
Confidence            678899875  35543333221    11144455555   4667888888889999988776554 34446888888888


Q ss_pred             ECCCCCEEEEecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecC
Q psy10867         86 ASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLS  149 (343)
Q Consensus        86 ~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~  149 (343)
                      |...|-+++.+                              .+|||..++....||.++.|.+.
T Consensus       232 ~~~~g~~~l~~------------------------------lSpDGtv~a~a~~dG~v~f~Qiy  265 (1283)
T KOG1916|consen  232 FFAEGVLKLAS------------------------------LSPDGTVFAWAISDGSVGFYQIY  265 (1283)
T ss_pred             HHhhchhhhee------------------------------eCCCCcEEEEeecCCccceeeee
Confidence            77655433332                              67777777777777777777654

>PLN00033 photosystem II stability/assembly factor; Provisional

Probab=95.79  E-value=1  Score=38.15  Aligned_cols=153  Identities=10%  Similarity=-0.008  Sum_probs=0.0

Q ss_pred             CCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEEecCCeEEEEEccCCc----
Q psy10867         35 SVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSGR----  110 (343)
Q Consensus        35 ~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~----  110 (343)
                      .+ ....+..++++.+++.+..-..++-||-...............+..+.|.+++.+++++..|. .++....++    
T Consensus       238 ~G-sf~~v~~~~dG~~~~vg~~G~~~~s~d~G~~~W~~~~~~~~~~l~~v~~~~dg~l~l~g~~G~-l~~S~d~G~~~~~  315 (398)
T PLN00033        238 TG-TFSTVNRSPDGDYVAVSSRGNFYLTWEPGQPYWQPHNRASARRIQNMGWRADGGLWLLTRGGG-LYVSKGTGLTEED  315 (398)
T ss_pred             cc-ceeeEEEcCCCCEEEEECCccEEEecCCCCcceEEecCCCccceeeeeEcCCCCEEEEeCCce-EEEecCCCCcccc


Q ss_pred             -eEEEecccCCC--eEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceE
Q psy10867        111 -LLATASSHYQP--ITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVT  187 (343)
Q Consensus       111 -~~~~~~~~~~~--v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  187 (343)
                       ...........  +..+.|.+++..+++|.. |.+....-...                    .++....-..-....+
T Consensus       316 ~~f~~~~~~~~~~~l~~v~~~~d~~~~a~G~~-G~v~~s~D~G~--------------------tW~~~~~~~~~~~~ly  374 (398)
T PLN00033        316 FDFEEADIKSRGFGILDVGYRSKKEAWAAGGS-GILLRSTDGGK--------------------SWKRDKGADNIAANLY  374 (398)
T ss_pred             cceeecccCCCCcceEEEEEcCCCcEEEEECC-CcEEEeCCCCc--------------------ceeEccccCCCCccee


Q ss_pred             EEEeecCCCceEEEEeeCCCeEEEEe
Q psy10867        188 HVTLSKLGAKSRVASVSHDRTCKIFD  213 (343)
Q Consensus       188 ~~~~~~~~~~~~l~~~~~d~~i~~wd  213 (343)
                      .+.|.+++   .....+.+|.|.-|.
T Consensus       375 ~v~f~~~~---~g~~~G~~G~il~~~  397 (398)
T PLN00033        375 SVKFFDDK---KGFVLGNDGVLLRYL  397 (398)
T ss_pred             EEEEcCCC---ceEEEeCCcEEEEeC

>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3

Probab=95.79  E-value=0.57  Score=35.25  Aligned_cols=57  Identities=18%  Similarity=0.255  Sum_probs=39.9

Q ss_pred             EEEEECCCCCEEEEecCCeEEEEEccC--CceEEEecccCCCeEEEEEecCCCEEEEecC
Q psy10867         82 SSMQASPDAAYIAVSIETKLHMWQISS--GRLLATASSHYQPITIVKWSADSNFIVTGGE  139 (343)
Q Consensus        82 ~~~~~s~~~~~l~~~~d~~i~v~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~  139 (343)
                      ..+.-++.+.++++...+.|.+|++.+  .+.+.++..- +.|..+.++..|+++++--.
T Consensus        21 ~~~c~~g~d~Lfva~~g~~Vev~~l~~~~~~~~~~F~Tv-~~V~~l~y~~~GDYlvTlE~   79 (215)
T PF14761_consen   21 TAVCCGGPDALFVAASGCKVEVYDLEQEECPLLCTFSTV-GRVLQLVYSEAGDYLVTLEE   79 (215)
T ss_pred             ceeeccCCceEEEEcCCCEEEEEEcccCCCceeEEEcch-hheeEEEeccccceEEEEEe
Confidence            334444434555556678899999983  3455566543 78999999999999998643

>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins

Probab=95.78  E-value=0.038  Score=29.30  Aligned_cols=30  Identities=7%  Similarity=-0.037  Sum_probs=25.8

Q ss_pred             cceEEEEeCCc---eEEEEEcCCCeEEEEeCCC
Q psy10867         38 SPHSMCLLGND---YVLGVEKGKPMIQAWPVNS   67 (343)
Q Consensus        38 ~v~~~~~~~~~---~~~~~~~~~~~i~iw~~~~   67 (343)
                      +++++.|+|+.   .+++.+...|.+.|+|+.+
T Consensus         2 AvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~   34 (43)
T PF10313_consen    2 AVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS   34 (43)
T ss_pred             CeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence            78999999854   5888888889999999985

It contains a characteristic DLL sequence motif.

>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs

Probab=95.77  E-value=1.6  Score=40.17  Aligned_cols=95  Identities=16%  Similarity=0.208  Sum_probs=54.3

Q ss_pred             CeEEEEEecCCCEEEEecCCCeEEEeecCcc-ceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCC-ce
Q psy10867        121 PITIVKWSADSNFIVTGGEDGTICVWQLSRL-ICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGA-KS  198 (343)
Q Consensus       121 ~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~  198 (343)
                      .|..+.++|+|++++..|..| |.|-.+... .....+..+...  -...............+...|..+.|+|.+. +.
T Consensus        86 ~v~~i~~n~~g~~lal~G~~~-v~V~~LP~r~g~~~~~~~g~~~--i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~~~  162 (717)
T PF10168_consen   86 EVHQISLNPTGSLLALVGPRG-VVVLELPRRWGKNGEFEDGKKE--INCRTVPVDERFFTSNSSLEIKQVRWHPWSESDS  162 (717)
T ss_pred             eEEEEEECCCCCEEEEEcCCc-EEEEEeccccCccccccCCCcc--eeEEEEEechhhccCCCCceEEEEEEcCCCCCCC
Confidence            578899999999999888855 555555321 000000000000  0000000001111224556899999999852 26


Q ss_pred             EEEEeeCCCeEEEEecCCCc
Q psy10867        199 RVASVSHDRTCKIFDLCTGE  218 (343)
Q Consensus       199 ~l~~~~~d~~i~~wd~~~~~  218 (343)
                      .|+.-..|+++|+||+...+
T Consensus       163 ~l~vLtsdn~lR~y~~~~~~  182 (717)
T PF10168_consen  163 HLVVLTSDNTLRLYDISDPQ  182 (717)
T ss_pred             eEEEEecCCEEEEEecCCCC
Confidence            78888999999999997543

It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].

>PF11635 Med16: Mediator complex subunit 16; InterPro: IPR021665 Mediator is a large complex of up to 33 proteins that is conserved from plants through fungi to humans - the number and representation of individual subunits varying with species [],[]

Probab=95.70  E-value=1.8  Score=40.32  Aligned_cols=78  Identities=13%  Similarity=0.090  Sum_probs=54.1

Q ss_pred             CCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccc-cc-cCCCCCC-------ccccccCcEEEEEEccCCCEEEE
Q psy10867        226 DTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDH-HI-QDSTSNP-------DFIGHEKQVTSLSCSITGITLLS  296 (343)
Q Consensus       226 ~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~-~~-~~~~~~~-------~~~~~~~~v~~~~~s~~~~~l~s  296 (343)
                      +..|.++....-+..++....||+|.++|-.+.+..... .. .....+.       .+. +-..+..++|||.+.-++.
T Consensus       259 ~~~V~si~~~~~~~~v~~~~~DGsI~~~dr~t~~~~~~~~~~~~~~~~v~s~~~~Gf~fp-~~~~~~~vafSPt~c~~v~  337 (753)
T PF11635_consen  259 NKRVVSITSPELDIVVAFAFSDGSIEFRDRNTMKELNETRTNGEPPNTVTSLFQAGFHFP-CIQPPLHVAFSPTMCSLVQ  337 (753)
T ss_pred             CCeEEEEEecccCcEEEEEEcCCeEEEEecCcchhhcccccccCCccccccccccccccc-cCCCCceEEECcccceEEE
Confidence            456888888888889999999999999999887655433 00 0000011       111 1224567899999999999


Q ss_pred             EeCCCcEE
Q psy10867        297 SSADETLK  304 (343)
Q Consensus       297 ~~~dg~i~  304 (343)
                      -..+|.+.
T Consensus       338 ~~~~~~~~  345 (753)
T PF11635_consen  338 IDEDGKTK  345 (753)
T ss_pred             EecCCCce
Confidence            99999866

It is arranged into four different sections, a core, a head, a tail and a kinase-activity part, and the number of subunits within each of these is what varies with species. Overall, Mediator regulates the transcriptional activity of RNA polymerase II but it would appear that each of the four different sections has a slightly different function. Med16 is one of the subunits of the Tail portion of the Mediator complex and is required for lipopolysaccharide gene-expression []. Several members including the human protein, Q9Y2X0 from SWISSPROT, have one or more WD40 domains on them, PF00400 from PFAM.

>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]

Probab=95.69  E-value=0.43  Score=40.67  Aligned_cols=132  Identities=8%  Similarity=-0.007  Sum_probs=84.2

Q ss_pred             CCeEEEEecCCceEEEEEecCCCCcceEEEEeCCc--------eEEEEEcCCCeEEEEeCCC-cccceecc----cCCcc
Q psy10867         14 SGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGND--------YVLGVEKGKPMIQAWPVNS-QEKAQLRL----ICPGR   80 (343)
Q Consensus        14 dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~--------~~~~~~~~~~~i~iw~~~~-~~~~~~~~----~~~~~   80 (343)
                      ...++-.|++.|+.+-.+..|..  + -+.|.|..        .-+++-++ ..|.-.|..- +..+....    .....
T Consensus       489 ~~kLykmDIErGkvveeW~~~dd--v-vVqy~p~~kf~qmt~eqtlvGlS~-~svFrIDPR~~gNKi~v~esKdY~tKn~  564 (776)
T COG5167         489 RDKLYKMDIERGKVVEEWDLKDD--V-VVQYNPYFKFQQMTDEQTLVGLSD-YSVFRIDPRARGNKIKVVESKDYKTKNK  564 (776)
T ss_pred             cccceeeecccceeeeEeecCCc--c-eeecCCchhHHhcCccceEEeecc-cceEEecccccCCceeeeeehhcccccc
Confidence            46677789999999999999986  2 66777742        34444454 3343334332 21121110    12223


Q ss_pred             eEEEEECCCCCEEEEecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCc
Q psy10867         81 ISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSR  150 (343)
Q Consensus        81 v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~  150 (343)
                      ..+..-...|-..+++..|.|++||--.-+....+.+....|..+..+.+|+++++.+. ..+.+-|++-
T Consensus       565 Fss~~tTesGyIa~as~kGDirLyDRig~rAKtalP~lG~aIk~idvta~Gk~ilaTCk-~yllL~d~~i  633 (776)
T COG5167         565 FSSGMTTESGYIAAASRKGDIRLYDRIGKRAKTALPGLGDAIKHIDVTANGKHILATCK-NYLLLTDVPI  633 (776)
T ss_pred             ccccccccCceEEEecCCCceeeehhhcchhhhcCcccccceeeeEeecCCcEEEEeec-ceEEEEeccc
Confidence            34444444554444578899999996544445566777888999999999998877765 5788887754

>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus

Probab=95.69  E-value=0.21  Score=42.18  Aligned_cols=86  Identities=12%  Similarity=0.171  Sum_probs=61.1

Q ss_pred             EEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcc-eEEEEECCC-----------------CC
Q psy10867         30 SYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGR-ISSMQASPD-----------------AA   91 (343)
Q Consensus        30 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~-v~~~~~s~~-----------------~~   91 (343)
                      .+..... .+.+++.+|++.++|+.+.=|.|.|+|+.++..++..++-.+. +.-+....+                 ..
T Consensus       302 ~l~D~~R-~~~~i~~sP~~~laA~tDslGRV~LiD~~~~~vvrmWKGYRdAqc~wi~~~~~~~~~~~~~~~~~~~~~~~l  380 (415)
T PF14655_consen  302 GLPDSKR-EGESICLSPSGRLAAVTDSLGRVLLIDVARGIVVRMWKGYRDAQCGWIEVPEEGDRDRSNSNSPKSSSRFAL  380 (415)
T ss_pred             eeccCCc-eEEEEEECCCCCEEEEEcCCCcEEEEECCCChhhhhhccCccceEEEEEeecccccccccccccCCCCcceE
Confidence            4455555 7889999999999999888899999999999888777654432 111111111                 12


Q ss_pred             EEEE--ecCCeEEEEEccCCceEEEec
Q psy10867         92 YIAV--SIETKLHMWQISSGRLLATAS  116 (343)
Q Consensus        92 ~l~~--~~d~~i~v~~~~~~~~~~~~~  116 (343)
                      +|+.  -..|.|.||.+++|..+..+.
T Consensus       381 ~LvIyaprRg~lEvW~~~~g~Rv~a~~  407 (415)
T PF14655_consen  381 FLVIYAPRRGILEVWSMRQGPRVAAFN  407 (415)
T ss_pred             EEEEEeccCCeEEEEecCCCCEEEEEE
Confidence            4443  468899999999998877664

>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []

Probab=95.62  E-value=0.85  Score=41.24  Aligned_cols=161  Identities=11%  Similarity=0.160  Sum_probs=94.0

Q ss_pred             CCEEEEecCCeEEEEEccCCceEE------Eec----------------ccCCCeEEEEEec--CCCEEEEecCCCeEEE
Q psy10867         90 AAYIAVSIETKLHMWQISSGRLLA------TAS----------------SHYQPITIVKWSA--DSNFIVTGGEDGTICV  145 (343)
Q Consensus        90 ~~~l~~~~d~~i~v~~~~~~~~~~------~~~----------------~~~~~v~~~~~~~--~~~~l~s~~~dg~i~i  145 (343)
                      ..+|..+..+.|.||++..-....      .+.                .....|+.|....  +...|+.+.+||.|.+
T Consensus        49 ~n~LFiA~~s~I~Vy~~d~l~~~p~~~p~~~~~t~p~~~~~~D~~~s~~p~PHtIN~i~v~~lg~~EVLl~c~DdG~V~~  128 (717)
T PF08728_consen   49 RNLLFIAYQSEIYVYDPDGLTQLPSRKPCLRFDTKPEFTSTPDRLISTWPFPHTINFIKVGDLGGEEVLLLCTDDGDVLA  128 (717)
T ss_pred             CCEEEEEECCEEEEEecCCcccccccccccccccCccccccccccccCCCCCceeeEEEecccCCeeEEEEEecCCeEEE
Confidence            677777889999999976432211      110                0112344444433  4568889999999999


Q ss_pred             eecCcccee-eeeecCCCCCCCCccccccceeeeecccccceEEEEee--cCCCceEEEEeeCCCeEEEEecCCC--ce-
Q psy10867        146 WQLSRLICK-QTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLS--KLGAKSRVASVSHDRTCKIFDLCTG--ED-  219 (343)
Q Consensus       146 wd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~~~l~~~~~d~~i~~wd~~~~--~~-  219 (343)
                      |.+++-... .....  ....... ....++...+. -...+++++++  ...  +++|+++....|.||-+...  +. 
T Consensus       129 Yyt~~I~~~i~~~~~--~~~~~~~-r~~i~P~f~~~-v~~SaWGLdIh~~~~~--rlIAVSsNs~~VTVFaf~l~~~r~~  202 (717)
T PF08728_consen  129 YYTETIIEAIERFSE--DNDSGFS-RLKIKPFFHLR-VGASAWGLDIHDYKKS--RLIAVSSNSQEVTVFAFALVDERFY  202 (717)
T ss_pred             EEHHHHHHHHHhhcc--ccccccc-cccCCCCeEee-cCCceeEEEEEecCcc--eEEEEecCCceEEEEEEeccccccc
Confidence            987542100 00000  0000000 01112222222 33478899998  555  78888888888888755432  11 


Q ss_pred             -EEEeecCCcEEEEEEcCCC---C---EEEEEcCCCcEEEEEee
Q psy10867        220 -LLSLILDTRLTCVAFDGTE---D---NIYMGTSEGVIKSFCLR  256 (343)
Q Consensus       220 -~~~~~~~~~i~~~~~~~~~---~---~l~~~~~d~~i~i~d~~  256 (343)
                       .....+...|.+++|-++.   .   .+++++-.|.+.+|++.
T Consensus       203 ~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I~  246 (717)
T PF08728_consen  203 HVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKIK  246 (717)
T ss_pred             cccccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEEE
Confidence             1123356779999997754   2   77788899999999884

RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].

>PF03022 MRJP: Major royal jelly protein; InterPro: IPR003534 The major royal jelly proteins (MRJPs) comprise 12

Probab=95.62  E-value=0.94  Score=36.52  Aligned_cols=137  Identities=11%  Similarity=0.168  Sum_probs=77.3

Q ss_pred             CeEEEEecCCceEEEEEecCCC-----CcceEEEEeCC------ceEEEEEcCCCeEEEEeCCCcccceecccC------
Q psy10867         15 GAISVWEPKGGTLLMSYKGASV-----LSPHSMCLLGN------DYVLGVEKGKPMIQAWPVNSQEKAQLRLIC------   77 (343)
Q Consensus        15 g~i~iwd~~~~~~~~~~~~~~~-----~~v~~~~~~~~------~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~------   77 (343)
                      -.|.+||+.+++.++++.-+..     .....+.+...      +....+-...+-|.++|+.+++.-+.+..+      
T Consensus        34 pKLv~~Dl~t~~li~~~~~p~~~~~~~s~lndl~VD~~~~~~~~~~aYItD~~~~glIV~dl~~~~s~Rv~~~~~~~~p~  113 (287)
T PF03022_consen   34 PKLVAFDLKTNQLIRRYPFPPDIAPPDSFLNDLVVDVRDGNCDDGFAYITDSGGPGLIVYDLATGKSWRVLHNSFSPDPD  113 (287)
T ss_dssp             -EEEEEETTTTCEEEEEE--CCCS-TCGGEEEEEEECTTTTS-SEEEEEEETTTCEEEEEETTTTEEEEEETCGCTTS-S
T ss_pred             cEEEEEECCCCcEEEEEECChHHcccccccceEEEEccCCCCcceEEEEeCCCcCcEEEEEccCCcEEEEecCCcceecc
Confidence            4789999999999888765432     14566777652      233334344468999999987654433221      


Q ss_pred             -------------CcceEEEEECC---CCCEEEEecCCeEEEEEccCC-----c---------eEEEecccCCCeEEEEE
Q psy10867         78 -------------PGRISSMQASP---DAAYIAVSIETKLHMWQISSG-----R---------LLATASSHYQPITIVKW  127 (343)
Q Consensus        78 -------------~~~v~~~~~s~---~~~~l~~~~d~~i~v~~~~~~-----~---------~~~~~~~~~~~v~~~~~  127 (343)
                                   .+.+..++.+|   +++.|.-+.=..-++|.+.+.     .         .++.+.........+++
T Consensus       114 ~~~~~i~g~~~~~~dg~~gial~~~~~d~r~LYf~~lss~~ly~v~T~~L~~~~~~~~~~~~~~v~~lG~k~~~s~g~~~  193 (287)
T PF03022_consen  114 AGPFTIGGESFQWPDGIFGIALSPISPDGRWLYFHPLSSRKLYRVPTSVLRDPSLSDAQALASQVQDLGDKGSQSDGMAI  193 (287)
T ss_dssp             SEEEEETTEEEEETTSEEEEEE-TTSTTS-EEEEEETT-SEEEEEEHHHHCSTT--HHH-HHHT-EEEEE---SECEEEE
T ss_pred             ccceeccCceEecCCCccccccCCCCCCccEEEEEeCCCCcEEEEEHHHhhCccccccccccccceeccccCCCCceEEE
Confidence                         12245555544   444554322122223333211     0         11222111234567888


Q ss_pred             ecCCCEEEEecCCCeEEEeecCcc
Q psy10867        128 SADSNFIVTGGEDGTICVWQLSRL  151 (343)
Q Consensus       128 ~~~~~~l~s~~~dg~i~iwd~~~~  151 (343)
                      .++|.++++--..+.|..|+..+.
T Consensus       194 D~~G~ly~~~~~~~aI~~w~~~~~  217 (287)
T PF03022_consen  194 DPNGNLYFTDVEQNAIGCWDPDGP  217 (287)
T ss_dssp             ETTTEEEEEECCCTEEEEEETTTS
T ss_pred             CCCCcEEEecCCCCeEEEEeCCCC
Confidence            899999989889999999999874

5% of the mass, and 82-90% of the protein content [], of honeybee (Apis mellifera) royal jelly. Royal jelly is a substance secreted by the cephalic glands of nurse bees [] and it is used to trigger development of a queen bee from a bee larva. The biological function of the MRJPs is unknown, but they are believed to play a major role in nutrition due to their high essential amino acid content []. Two royal jelly proteins, MRJP3 and MRJP5, contain a tandem repeat that results from a high genetic variablility. This polymorphism may be useful for genotyping individual bees [].; PDB: 3Q6P_B 3Q6K_A 3Q6T_A 2QE8_B.

>PRK10115 protease 2; Provisional

Probab=95.60  E-value=1.8  Score=39.80  Aligned_cols=71  Identities=11%  Similarity=0.185  Sum_probs=47.3

Q ss_pred             cceEEEEECCCCCEEEEecC------CeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCC------CeEEEe
Q psy10867         79 GRISSMQASPDAAYIAVSIE------TKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGED------GTICVW  146 (343)
Q Consensus        79 ~~v~~~~~s~~~~~l~~~~d------~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d------g~i~iw  146 (343)
                      -.+..+.++||+++|+.+.|      ..|++.|+.+|..+...-....  ..++|.+|++.|+....+      ..|..+
T Consensus       127 ~~l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~~~~--~~~~w~~D~~~~~y~~~~~~~~~~~~v~~h  204 (686)
T PRK10115        127 YTLGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLDNVE--PSFVWANDSWTFYYVRKHPVTLLPYQVWRH  204 (686)
T ss_pred             EEEeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCccccCcc--eEEEEeeCCCEEEEEEecCCCCCCCEEEEE
Confidence            34777889999999996422      2699999988864322211111  469999999866665432      357777


Q ss_pred             ecCcc
Q psy10867        147 QLSRL  151 (343)
Q Consensus       147 d~~~~  151 (343)
                      ++.+.
T Consensus       205 ~lgt~  209 (686)
T PRK10115        205 TIGTP  209 (686)
T ss_pred             ECCCC
Confidence            77765

>COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only]

Probab=95.58  E-value=0.07  Score=44.42  Aligned_cols=163  Identities=14%  Similarity=0.093  Sum_probs=95.4

Q ss_pred             cCCcceEEEEECCCCCEEEEecCCeEEEEEccCCceEE-Ee-cccCC----CeE-EEEEecCCCEEEEecCCCeEEEe-e
Q psy10867         76 ICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLA-TA-SSHYQ----PIT-IVKWSADSNFIVTGGEDGTICVW-Q  147 (343)
Q Consensus        76 ~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~-~~-~~~~~----~v~-~~~~~~~~~~l~s~~~dg~i~iw-d  147 (343)
                      .....|..+-..|||+.|..-...++.++++.+..... ++ ....+    .|+ .+..-..+.-++.++.||-|.-| |
T Consensus       218 ~~~~~v~qllL~Pdg~~LYv~~g~~~~v~~L~~r~l~~rkl~~dspg~~~~~Vte~l~lL~Gg~SLLv~~~dG~vsQWFd  297 (733)
T COG4590         218 VPFSDVSQLLLTPDGKTLYVRTGSELVVALLDKRSLQIRKLVDDSPGDSRHQVTEQLYLLSGGFSLLVVHEDGLVSQWFD  297 (733)
T ss_pred             CCccchHhhEECCCCCEEEEecCCeEEEEeecccccchhhhhhcCCCchHHHHHHHHHHHhCceeEEEEcCCCceeeeee
Confidence            33456777888999999988555888888887653221 11 11111    122 11122345668888899988877 5


Q ss_pred             cCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCC
Q psy10867        148 LSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDT  227 (343)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~  227 (343)
                      .+.... ..+.                .++.++-...++..+.  |+.+.+-+++-+..|++.++.....+.+..-..-.
T Consensus       298 vr~~~~-p~l~----------------h~R~f~l~pa~~~~l~--pe~~rkgF~~l~~~G~L~~f~st~~~~lL~~~~~~  358 (733)
T COG4590         298 VRRDGQ-PHLN----------------HIRNFKLAPAEVQFLL--PETNRKGFYSLYRNGTLQSFYSTSEKLLLFERAYQ  358 (733)
T ss_pred             eecCCC-Ccce----------------eeeccccCcccceeec--cccccceEEEEcCCCceeeeecccCcceehhhhhc
Confidence            544321 1110                1222222223333332  33333667788888888888754444433333334


Q ss_pred             cEEEEEEcCCCCEEEEEcCCCcEEEEEeecc
Q psy10867        228 RLTCVAFDGTEDNIYMGTSEGVIKSFCLRQV  258 (343)
Q Consensus       228 ~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~  258 (343)
                      .+.-++++|++.++++- ..|.++++.+++.
T Consensus       359 ~~~~~~~Sp~~~~Ll~e-~~gki~~~~l~Nr  388 (733)
T COG4590         359 APQLVAMSPNQAYLLSE-DQGKIRLAQLENR  388 (733)
T ss_pred             CcceeeeCcccchheee-cCCceEEEEecCC
Confidence            67778999999998875 4678999988764

>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins

Probab=95.44  E-value=0.087  Score=27.97  Aligned_cols=31  Identities=19%  Similarity=-0.008  Sum_probs=25.7

Q ss_pred             CcEEEEEEccCC---CEEEEEeCCCcEEEEeccc
Q psy10867        280 KQVTSLSCSITG---ITLLSSSADETLKIWHTIS  310 (343)
Q Consensus       280 ~~v~~~~~s~~~---~~l~s~~~dg~i~iwd~~~  310 (343)
                      +.+.++.|+|+.   .+|+.+-.-|.|.++|+++
T Consensus         1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~   34 (43)
T PF10313_consen    1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS   34 (43)
T ss_pred             CCeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence            368899999854   4888888889999999985

It contains a characteristic DLL sequence motif.

>KOG2377|consensus

Probab=95.26  E-value=1.6  Score=36.88  Aligned_cols=169  Identities=15%  Similarity=0.139  Sum_probs=98.0

Q ss_pred             CceEEEEEecCCCC-----cceEEEEeCCceEEEEEcCCCeEEEEeCCCc---ccceecccCCcceEEEEECCCCCEEEE
Q psy10867         24 GGTLLMSYKGASVL-----SPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQ---EKAQLRLICPGRISSMQASPDAAYIAV   95 (343)
Q Consensus        24 ~~~~~~~~~~~~~~-----~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~---~~~~~~~~~~~~v~~~~~s~~~~~l~~   95 (343)
                      +|..-+.+..|...     .-+.+-|...++.+.+... |.+.=|-....   -++..-....++|.++.||+|.+.||+
T Consensus         5 sGalyhelihhPslfcnipesngvFfDDaNkqlfavrS-ggatgvvvkgpndDVpiSfdm~d~G~I~SIkFSlDnkilAV   83 (657)
T KOG2377|consen    5 SGALYHELIHHPSLFCNIPESNGVFFDDANKQLFAVRS-GGATGVVVKGPNDDVPISFDMDDKGEIKSIKFSLDNKILAV   83 (657)
T ss_pred             CcceEEEEecCchhhccCCcccceeeccCcceEEEEec-CCeeEEEEeCCCCCCCceeeecCCCceeEEEeccCcceEEE
Confidence            44444455444320     2344555544444444433 44555544322   222333356779999999999999999


Q ss_pred             -ecCCeEEEEEccCCceE----EEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccc
Q psy10867         96 -SIETKLHMWQISSGRLL----ATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVT  170 (343)
Q Consensus        96 -~~d~~i~v~~~~~~~~~----~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  170 (343)
                       -.+++|.+++....+..    .+.+..+..|...+|+.+ ..++..+..| +.+|......                  
T Consensus        84 QR~~~~v~f~nf~~d~~~l~~~~~ck~k~~~IlGF~W~~s-~e~A~i~~~G-~e~y~v~pek------------------  143 (657)
T KOG2377|consen   84 QRTSKTVDFCNFIPDNSQLEYTQECKTKNANILGFCWTSS-TEIAFITDQG-IEFYQVLPEK------------------  143 (657)
T ss_pred             EecCceEEEEecCCCchhhHHHHHhccCcceeEEEEEecC-eeEEEEecCC-eEEEEEchhh------------------
Confidence             57899999997443322    233344556899999865 4555555444 6666554432                  


Q ss_pred             cccceeeeecccccceEEEEeecCCCceEEEEee-CCCeEEEEecCCC
Q psy10867        171 GLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVS-HDRTCKIFDLCTG  217 (343)
Q Consensus       171 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~-~d~~i~~wd~~~~  217 (343)
                         ..++..+.|...|+...|+++.+ -.+++.+ ..+++.=+.++++
T Consensus       144 ---rslRlVks~~~nvnWy~yc~et~-v~LL~t~~~~n~lnpf~~~~~  187 (657)
T KOG2377|consen  144 ---RSLRLVKSHNLNVNWYMYCPETA-VILLSTTVLENVLNPFHFRAG  187 (657)
T ss_pred             ---hhhhhhhhcccCccEEEEccccc-eEeeeccccccccccEEEeec
Confidence               24555667888999999999873 2223333 3444444444443

>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118

Probab=95.07  E-value=1.4  Score=35.20  Aligned_cols=224  Identities=15%  Similarity=0.113  Sum_probs=122.4

Q ss_pred             ceEEEEECCCCCEEEE-ecCCeEEEEEcc------CC-ceEEEecc-----cCCCeEEEEEecCCC------------EE
Q psy10867         80 RISSMQASPDAAYIAV-SIETKLHMWQIS------SG-RLLATASS-----HYQPITIVKWSADSN------------FI  134 (343)
Q Consensus        80 ~v~~~~~s~~~~~l~~-~~d~~i~v~~~~------~~-~~~~~~~~-----~~~~v~~~~~~~~~~------------~l  134 (343)
                      .-+.|+++|.+.+-++ ...+...+||..      .. .++..+..     .....+.+.|+....            .+
T Consensus        24 N~WGia~~p~~~~WVadngT~~~TlYdg~~~~~~g~~~~L~vtiP~~~~~~~~~~PTGiVfN~~~~F~vt~~g~~~~a~F  103 (336)
T TIGR03118        24 NAWGLSYRPGGPFWVANTGTGTATLYVGNPDTQPLVQDPLVVVIPAPPPLAAEGTPTGQVFNGSDTFVVSGEGITGPSRF  103 (336)
T ss_pred             ccceeEecCCCCEEEecCCcceEEeecCCcccccCCccceEEEecCCCCCCCCCCccEEEEeCCCceEEcCCCcccceeE
Confidence            4578999999887776 456789999986      11 22333331     224567777764332            36


Q ss_pred             EEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeec-ccccce-EEEEeecCCCc-eEEEEeeCCCeEEE
Q psy10867        135 VTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKS-QHSLPV-THVTLSKLGAK-SRVASVSHDRTCKI  211 (343)
Q Consensus       135 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v-~~~~~~~~~~~-~~l~~~~~d~~i~~  211 (343)
                      +.+++||+|.-|...-.....+                 .....+. .....| ..+++...+.. .+.++--..++|.+
T Consensus       104 if~tEdGTisaW~p~v~~t~~~-----------------~~~~~~d~s~~gavYkGLAi~~~~~~~~LYaadF~~g~IDV  166 (336)
T TIGR03118       104 LFVTEDGTLSGWAPALGTTRMT-----------------RAEIVVDASQQGNVYKGLAVGPTGGGDYLYAANFRQGRIDV  166 (336)
T ss_pred             EEEeCCceEEeecCcCCccccc-----------------ccEEEEccCCCcceeeeeEEeecCCCceEEEeccCCCceEE
Confidence            7788999999998643321000                 0011111 112233 34555433211 34444456789999


Q ss_pred             EecCCCceEE--EeecC--------CcE---------EEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCC
Q psy10867        212 FDLCTGEDLL--SLILD--------TRL---------TCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSN  272 (343)
Q Consensus       212 wd~~~~~~~~--~~~~~--------~~i---------~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~  272 (343)
                      ||-.-.+...  .+..+        -.|         +-..-.++.+.=+.|..-|.|.+||+...-..+          
T Consensus       167 Fd~~f~~~~~~g~F~DP~iPagyAPFnIqnig~~lyVtYA~qd~~~~d~v~G~G~G~VdvFd~~G~l~~r----------  236 (336)
T TIGR03118       167 FKGSFRPPPLPGSFIDPALPAGYAPFNVQNLGGTLYVTYAQQDADRNDEVAGAGLGYVNVFTLNGQLLRR----------  236 (336)
T ss_pred             ecCccccccCCCCccCCCCCCCCCCcceEEECCeEEEEEEecCCcccccccCCCcceEEEEcCCCcEEEE----------
Confidence            9854322110  01000        011         111112223233334445788888876532111          


Q ss_pred             CccccccCcEEEEEEcc------CCCEEEEEeCCCcEEEEecccceeeeecc-c------CCceEEEEEcc
Q psy10867        273 PDFIGHEKQVTSLSCSI------TGITLLSSSADETLKIWHTISRQCLRTIQ-H------KGPVLGAFLGL  330 (343)
Q Consensus       273 ~~~~~~~~~v~~~~~s~------~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~------~~~v~~~~~sp  330 (343)
                      ..-.+.-...+.|+..|      .+.+|+---.||+|..+|..+|+.+..+. .      ...++.+.|..
T Consensus       237 ~as~g~LNaPWG~a~APa~FG~~sg~lLVGNFGDG~InaFD~~sG~~~g~L~~~~G~pi~i~GLWgL~fGn  307 (336)
T TIGR03118       237 VASSGRLNAPWGLAIAPESFGSLSGALLVGNFGDGTINAYDPQSGAQLGQLLDPDNHPVKVDGLWSLTFGN  307 (336)
T ss_pred             eccCCcccCCceeeeChhhhCCCCCCeEEeecCCceeEEecCCCCceeeeecCCCCCeEEecCeEEeeeCC
Confidence            01123334567777765      45677776779999999999999888876 2      23467888865

This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.

>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3

Probab=95.05  E-value=1.1  Score=33.84  Aligned_cols=109  Identities=12%  Similarity=0.234  Sum_probs=63.9

Q ss_pred             eEEEEeCCceEEEEEcCCCeEEEEeCCCcccc-eecccCCcceEEEEECCCCCEEEEe----cCC---eEEEE---Ecc-
Q psy10867         40 HSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKA-QLRLICPGRISSMQASPDAAYIAVS----IET---KLHMW---QIS-  107 (343)
Q Consensus        40 ~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~-~~~~~~~~~v~~~~~s~~~~~l~~~----~d~---~i~v~---~~~-  107 (343)
                      ..++-.+.+.++++... ..|.+|++...+.. ......-+.|..+.++..|.+|++=    ...   .+++|   +.. 
T Consensus        21 ~~~c~~g~d~Lfva~~g-~~Vev~~l~~~~~~~~~~F~Tv~~V~~l~y~~~GDYlvTlE~k~~~~~~~fvR~Y~NWr~~~   99 (215)
T PF14761_consen   21 TAVCCGGPDALFVAASG-CKVEVYDLEQEECPLLCTFSTVGRVLQLVYSEAGDYLVTLEEKNKRSPVDFVRAYFNWRSQK   99 (215)
T ss_pred             ceeeccCCceEEEEcCC-CEEEEEEcccCCCceeEEEcchhheeEEEeccccceEEEEEeecCCccceEEEEEEEhhhhc
Confidence            44444553455444444 68999999843332 2223455899999999999999982    223   56665   211 


Q ss_pred             -CCceEE-Eecc---------------------cCCCeEEEEEec-CCCEEEEecCCCeEEEeecCcc
Q psy10867        108 -SGRLLA-TASS---------------------HYQPITIVKWSA-DSNFIVTGGEDGTICVWQLSRL  151 (343)
Q Consensus       108 -~~~~~~-~~~~---------------------~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~  151 (343)
                       ...++. ++-|                     -..++.+++..| .|+ |+.|+. +.+.+|.+...
T Consensus       100 ~~~~~v~vRiaG~~v~~~~~~~~~~qleiiElPl~~~p~ciaCC~~tG~-LlVg~~-~~l~lf~l~~~  165 (215)
T PF14761_consen  100 EENSPVRVRIAGHRVTPSFNESSKDQLEIIELPLSEPPLCIACCPVTGN-LLVGCG-NKLVLFTLKYQ  165 (215)
T ss_pred             ccCCcEEEEEcccccccCCCCccccceEEEEecCCCCCCEEEecCCCCC-EEEEcC-CEEEEEEEEEE
Confidence             111111 1112                     123566777777 455 444444 68999988764

>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin

Probab=95.04  E-value=0.25  Score=37.90  Aligned_cols=64  Identities=17%  Similarity=0.176  Sum_probs=47.1

Q ss_pred             eecCCCceEEEEeeCCCeEEEEecCCCceEEEe---------------ecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEe
Q psy10867        191 LSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSL---------------ILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCL  255 (343)
Q Consensus       191 ~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~---------------~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~  255 (343)
                      +...+  .++++.+.+|.+++||+.+++.+..-               .....|..+.++.+|.-+++- .+|..+.|+.
T Consensus        18 l~~~~--~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~l-sng~~y~y~~   94 (219)
T PF07569_consen   18 LECNG--SYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTL-SNGDSYSYSP   94 (219)
T ss_pred             EEeCC--CEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEE-eCCCEEEecc
Confidence            33445  68999999999999999998765433               123458888999888776665 4578888876


Q ss_pred             ec
Q psy10867        256 RQ  257 (343)
Q Consensus       256 ~~  257 (343)
                      .-
T Consensus        95 ~L   96 (219)
T PF07569_consen   95 DL   96 (219)
T ss_pred             cc
Confidence            53

These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus

>PF13449 Phytase-like: Esterase-like activity of phytase

Probab=94.90  E-value=1.8  Score=35.71  Aligned_cols=169  Identities=11%  Similarity=0.134  Sum_probs=91.5

Q ss_pred             CCCeEEEEEecCCCEEEEecCCCe------EEEeecCccc-eeeeeecCCCCCCCCccccccceeee-----ecccccce
Q psy10867        119 YQPITIVKWSADSNFIVTGGEDGT------ICVWQLSRLI-CKQTVAFGIPGSSGKGVTGLTEPLHV-----KSQHSLPV  186 (343)
Q Consensus       119 ~~~v~~~~~~~~~~~l~s~~~dg~------i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~v  186 (343)
                      -+.+..+.+.|++..+++.+.+|.      +..+++.... ....+...           ...++..     +.......
T Consensus        19 ~GGlSgl~~~~~~~~~~avSD~g~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~L~~~~G~~~~~~~~D~   87 (326)
T PF13449_consen   19 FGGLSGLDYDPDDGRFYAVSDRGPNKGPPRFYTFRIDYDQGGIGGVTIL-----------DMIPLRDPDGQPFPKNGLDP   87 (326)
T ss_pred             cCcEeeEEEeCCCCEEEEEECCCCCCCCCcEEEEEeeccCCCccceEec-----------cceeccCCCCCcCCcCCCCh
Confidence            356788999876666777777777      5555554310 00000000           0000000     00111245


Q ss_pred             EEEEeecCCCceEEEEeeCC------CeEEEEecCCCceEEEee----------------cCCcEEEEEEcCCCCEEEEE
Q psy10867        187 THVTLSKLGAKSRVASVSHD------RTCKIFDLCTGEDLLSLI----------------LDTRLTCVAFDGTEDNIYMG  244 (343)
Q Consensus       187 ~~~~~~~~~~~~~l~~~~~d------~~i~~wd~~~~~~~~~~~----------------~~~~i~~~~~~~~~~~l~~~  244 (343)
                      .+|++.+++  .++++.-.+      ..|+.++.. |+....+.                .+.....++++|+|+.|+++
T Consensus        88 Egi~~~~~g--~~~is~E~~~~~~~~p~I~~~~~~-G~~~~~~~vP~~~~~~~~~~~~~~~N~G~E~la~~~dG~~l~~~  164 (326)
T PF13449_consen   88 EGIAVPPDG--SFWISSEGGRTGGIPPRIRRFDLD-GRVIRRFPVPAAFLPDANGTSGRRNNRGFEGLAVSPDGRTLFAA  164 (326)
T ss_pred             hHeEEecCC--CEEEEeCCccCCCCCCEEEEECCC-CcccceEccccccccccCccccccCCCCeEEEEECCCCCEEEEE
Confidence            578886776  677776667      788888865 65544431                23458899999999977665


Q ss_pred             cC-----CC--c-------EEEEEeeccc---ccccccccCCCCCCcccc-----ccCcEEEEEEccCCCEEEEE-----
Q psy10867        245 TS-----EG--V-------IKSFCLRQVP---RTRDHHIQDSTSNPDFIG-----HEKQVTSLSCSITGITLLSS-----  297 (343)
Q Consensus       245 ~~-----d~--~-------i~i~d~~~~~---~~~~~~~~~~~~~~~~~~-----~~~~v~~~~~s~~~~~l~s~-----  297 (343)
                      ..     |+  .       ++++......   ...++       ...+..     ....++.+.+-+++++|+-=     
T Consensus       165 ~E~~l~~d~~~~~~~~~~~~ri~~~d~~~~~~~~~~~-------~y~ld~~~~~~~~~~isd~~al~d~~lLvLER~~~~  237 (326)
T PF13449_consen  165 MESPLKQDGPRANPDNGSPLRILRYDPKTPGEPVAEY-------AYPLDPPPTAPGDNGISDIAALPDGRLLVLERDFSP  237 (326)
T ss_pred             ECccccCCCcccccccCceEEEEEecCCCCCccceEE-------EEeCCccccccCCCCceeEEEECCCcEEEEEccCCC
Confidence            32     22  1       4555444321   11111       111111     35678889999999877631     


Q ss_pred             eCCCcEEEEec
Q psy10867        298 SADETLKIWHT  308 (343)
Q Consensus       298 ~~dg~i~iwd~  308 (343)
                      .....++|+.+
T Consensus       238 ~~~~~~ri~~v  248 (326)
T PF13449_consen  238 GTGNYKRIYRV  248 (326)
T ss_pred             CccceEEEEEE
Confidence            12345566544

>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat

Probab=94.88  E-value=0.15  Score=26.95  Aligned_cols=41  Identities=20%  Similarity=0.307  Sum_probs=29.2

Q ss_pred             cCCCEEEEEe-CCCcEEEEecccceeeeecccCCceEEEEEc
Q psy10867        289 ITGITLLSSS-ADETLKIWHTISRQCLRTIQHKGPVLGAFLG  329 (343)
Q Consensus       289 ~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~s  329 (343)
                      |++++|+++. .++.|.++|..+++.+..+........+.|+
T Consensus         1 pd~~~lyv~~~~~~~v~~id~~~~~~~~~i~vg~~P~~i~~~   42 (42)
T TIGR02276         1 PDGTKLYVTNSGSNTVSVIDTATNKVIATIPVGGYPFGVAVS   42 (42)
T ss_pred             CCCCEEEEEeCCCCEEEEEECCCCeEEEEEECCCCCceEEeC
Confidence            5677666544 5789999999999988888754445555553

This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).

>PHA02790 Kelch-like protein; Provisional

Probab=94.70  E-value=2.8  Score=36.86  Aligned_cols=102  Identities=14%  Similarity=0.038  Sum_probs=49.9

Q ss_pred             CceEEEEEcCC-----CeEEEEeCCCcccceecccCCcce-EEEEECCCCCEEEE-ecC--CeEEEEEccCCceEEE--e
Q psy10867         47 NDYVLGVEKGK-----PMIQAWPVNSQEKAQLRLICPGRI-SSMQASPDAAYIAV-SIE--TKLHMWQISSGRLLAT--A  115 (343)
Q Consensus        47 ~~~~~~~~~~~-----~~i~iw~~~~~~~~~~~~~~~~~v-~~~~~s~~~~~l~~-~~d--~~i~v~~~~~~~~~~~--~  115 (343)
                      ++.+++.|+.+     ..+..||..++.......-..... .+++ .-++.+.+. |.+  ..+..||..+++-...  +
T Consensus       271 ~~~lyviGG~~~~~~~~~v~~Ydp~~~~W~~~~~m~~~r~~~~~v-~~~~~iYviGG~~~~~sve~ydp~~n~W~~~~~l  349 (480)
T PHA02790        271 GEVVYLIGGWMNNEIHNNAIAVNYISNNWIPIPPMNSPRLYASGV-PANNKLYVVGGLPNPTSVERWFHGDAAWVNMPSL  349 (480)
T ss_pred             CCEEEEEcCCCCCCcCCeEEEEECCCCEEEECCCCCchhhcceEE-EECCEEEEECCcCCCCceEEEECCCCeEEECCCC
Confidence            44555555432     256778877765443221111111 1222 236666665 432  4688888766543322  2


Q ss_pred             cccCCCeEEEEEecCCCEEEEecCCC---eEEEeecCcc
Q psy10867        116 SSHYQPITIVKWSADSNFIVTGGEDG---TICVWQLSRL  151 (343)
Q Consensus       116 ~~~~~~v~~~~~~~~~~~l~s~~~dg---~i~iwd~~~~  151 (343)
                      ....... +++ .-+++..+.|+.++   .+..||..+.
T Consensus       350 ~~~r~~~-~~~-~~~g~IYviGG~~~~~~~ve~ydp~~~  386 (480)
T PHA02790        350 LKPRCNP-AVA-SINNVIYVIGGHSETDTTTEYLLPNHD  386 (480)
T ss_pred             CCCCccc-EEE-EECCEEEEecCcCCCCccEEEEeCCCC
Confidence            1111111 222 23677778877653   3667777654

>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal

Probab=94.41  E-value=1.1  Score=30.93  Aligned_cols=110  Identities=10%  Similarity=0.073  Sum_probs=68.3

Q ss_pred             EEeCCceEEEEEcCCCeEEEEeCCCcc--------cceecccCCcceEEEEECC-----CCCEEEEecCCeEEEEEccCC
Q psy10867         43 CLLGNDYVLGVEKGKPMIQAWPVNSQE--------KAQLRLICPGRISSMQASP-----DAAYIAVSIETKLHMWQISSG  109 (343)
Q Consensus        43 ~~~~~~~~~~~~~~~~~i~iw~~~~~~--------~~~~~~~~~~~v~~~~~s~-----~~~~l~~~~d~~i~v~~~~~~  109 (343)
                      .|.....-|+++..-|+|.|++.....        .+..+ .-...|++++--+     +...|+.+....+..||+...
T Consensus         5 kfDG~~pcL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~L-Nin~~italaaG~l~~~~~~D~LliGt~t~llaYDV~~N   83 (136)
T PF14781_consen    5 KFDGVHPCLACATTGGKVFIHNPHERGQRTGRQDSDISFL-NINQEITALAAGRLKPDDGRDCLLIGTQTSLLAYDVENN   83 (136)
T ss_pred             EeCCCceeEEEEecCCEEEEECCCccccccccccCceeEE-ECCCceEEEEEEecCCCCCcCEEEEeccceEEEEEcccC
Confidence            455555556666565899999876432        12222 3455677775433     346788888999999999887


Q ss_pred             ceEEEecccCCCeEEEEEec----CCCEEEEecCCCeEEEeecCccceee
Q psy10867        110 RLLATASSHYQPITIVKWSA----DSNFIVTGGEDGTICVWQLSRLICKQ  155 (343)
Q Consensus       110 ~~~~~~~~~~~~v~~~~~~~----~~~~l~s~~~dg~i~iwd~~~~~~~~  155 (343)
                      ..+..-. -.+.|.++.+-.    +..+++.|+ +..|.-||....+..+
T Consensus        84 ~d~Fyke-~~DGvn~i~~g~~~~~~~~l~ivGG-ncsi~Gfd~~G~e~fW  131 (136)
T PF14781_consen   84 SDLFYKE-VPDGVNAIVIGKLGDIPSPLVIVGG-NCSIQGFDYEGNEIFW  131 (136)
T ss_pred             chhhhhh-CccceeEEEEEecCCCCCcEEEECc-eEEEEEeCCCCcEEEE
Confidence            6554333 346688887743    234455544 5778888877654433

>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast [])

Probab=94.38  E-value=0.47  Score=34.97  Aligned_cols=31  Identities=10%  Similarity=0.323  Sum_probs=25.5

Q ss_pred             CCeEEEEEecCC------CEEEEecCCCeEEEeecCc
Q psy10867        120 QPITIVKWSADS------NFIVTGGEDGTICVWQLSR  150 (343)
Q Consensus       120 ~~v~~~~~~~~~------~~l~s~~~dg~i~iwd~~~  150 (343)
                      ..+..++|+|.|      -+|++.+.++.|.+|....
T Consensus        86 ~~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~~~  122 (173)
T PF12657_consen   86 SQVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGPPG  122 (173)
T ss_pred             ccEEEEEECCCCCCCCCceEEEEEcCCCeEEEEecCC
Confidence            378999999943      3788889999999998765

The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].

>COG3292 Predicted periplasmic ligand-binding sensor domain [Signal transduction mechanisms]

Probab=94.32  E-value=3.3  Score=36.15  Aligned_cols=290  Identities=9%  Similarity=-0.009  Sum_probs=142.4

Q ss_pred             EecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecc-cCCcceEEEEEC
Q psy10867          9 FSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRL-ICPGRISSMQAS   87 (343)
Q Consensus         9 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~-~~~~~v~~~~~s   87 (343)
                      +.+..|| +..+|..+++.++.-....+.+|..+..+-++++.++...  -+.+.+.+..+...... -..+.|..+.-.
T Consensus       179 WvgT~dG-L~~fd~~~gkalql~s~~~dk~I~al~~d~qg~LWVGTdq--Gv~~~e~~G~~~sn~~~~lp~~~I~ll~qD  255 (671)
T COG3292         179 WVGTPDG-LSYFDAGRGKALQLASPPLDKAINALIADVQGRLWVGTDQ--GVYLQEAEGWRASNWGPMLPSGNILLLVQD  255 (671)
T ss_pred             EEecCCc-ceEEccccceEEEcCCCcchhhHHHHHHHhcCcEEEEecc--ceEEEchhhccccccCCCCcchheeeeecc
Confidence            3334344 6677877787777655554227777777777777666555  47777776643332111 223445555544


Q ss_pred             CCCCEEEEecCCeEEEEEccCCce-EEEecccC--CCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCC
Q psy10867         88 PDAAYIAVSIETKLHMWQISSGRL-LATASSHY--QPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGS  164 (343)
Q Consensus        88 ~~~~~l~~~~d~~i~v~~~~~~~~-~~~~~~~~--~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~  164 (343)
                      .+|.+-+++.+|..+ +....... ....+.|.  ..|.++-...+|. +-+++.+|.+++-+-.-. ...         
T Consensus       256 ~qG~lWiGTenGl~r-~~l~rq~Lq~~~~~~~l~~S~vnsL~~D~dGs-LWv~t~~giv~~~~a~w~-~ma---------  323 (671)
T COG3292         256 AQGELWIGTENGLWR-TRLPRQGLQIPLSKMHLGVSTVNSLWLDTDGS-LWVGTYGGIVRYLTADWK-RMA---------  323 (671)
T ss_pred             cCCCEEEeeccccee-EecCCCCccccccccCCccccccceeeccCCC-EeeeccCceEEEecchhh-hee---------
Confidence            455555555555332 23322222 12222222  3455555555555 566676666655433211 000         


Q ss_pred             CCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee--cCCcEEEEEEcCCCCEEE
Q psy10867        165 SGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI--LDTRLTCVAFDGTEDNIY  242 (343)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~  242 (343)
                                .+...  ....+...+..|..-...+--...-|.+.+-+-.++..+....  -...|+.+++.. +..+-
T Consensus       324 ----------~in~~--dG~v~~~~~~a~~ll~~~v~~~ns~g~L~van~stG~~v~sv~q~Rg~nit~~~~d~-~g~lW  390 (671)
T COG3292         324 ----------VINDS--DGGVSQYEAVAPALLSWGVRQLNSIGELMVANGSTGELVRSVHQLRGMNITTTLEDS-RGRLW  390 (671)
T ss_pred             ----------eeecC--CCchhhhhccCchhcccceeeccccceEEEecCCCCcEEEEeeeccccccchhhhcc-CCcEE
Confidence                      00000  0111111111221000111112222334444445555555433  134577777777 44455


Q ss_pred             EEcCCCcEEEEEeecccccccccccCCCCCCcc-ccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc---
Q psy10867        243 MGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDF-IGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ---  318 (343)
Q Consensus       243 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~---  318 (343)
                      .|+...-+..|+.++....          .... ....++|..+.=.|+++ |..|+.+|.++. +.+.++....+.   
T Consensus       391 lgs~q~GLsrl~n~n~~av----------lde~agl~ss~V~aived~dns-LWIGTs~Glvk~-~pe~~~v~n~ln~~~  458 (671)
T COG3292         391 LGSMQNGLSRLDNKNEWAV----------LDEDAGLPSSEVSAIVEDPDNS-LWIGTSGGLVKR-DPESGRVLNLLNPGS  458 (671)
T ss_pred             EEecccchhhhccCCcccc----------cccccCCcccceeeeeecCCCC-EEEeccCCeEec-Cccccchhccccccc
Confidence            5665544556665551111          1111 11346788888888888 888888886554 445544444433   


Q ss_pred             ---cCCceEEEEEccCCCeeeec
Q psy10867        319 ---HKGPVLGAFLGLLPPAIHDY  338 (343)
Q Consensus       319 ---~~~~v~~~~~sp~~~~l~~~  338 (343)
                         ..+.+..+...|+|+.-+++
T Consensus       459 ~~l~~s~~~~lg~~~~g~Lw~a~  481 (671)
T COG3292         459 HGLDGSRVEQLGLGPDGRLWLAA  481 (671)
T ss_pred             CcCCcchhhhhccCCCCceEEEe
Confidence               23446667788888765543

>KOG1900|consensus

Probab=94.23  E-value=1.7  Score=41.78  Aligned_cols=164  Identities=14%  Similarity=0.184  Sum_probs=99.7

Q ss_pred             CCcceEEEEECCCCCEEEEecCCeEEEEEccCCceEEEecccCCCeEEEEEe-c-------CCCEEEEecCCCeEEEeec
Q psy10867         77 CPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWS-A-------DSNFIVTGGEDGTICVWQL  148 (343)
Q Consensus        77 ~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~-~-------~~~~l~s~~~dg~i~iwd~  148 (343)
                      |...-..+-+.|.=...-.+.|+.+.+|+.+++.....+.+....|..+..- |       .=++++..+.--.|.++-+
T Consensus        77 ~~~~~~~mGiFpeI~RaWiTiDn~L~lWny~~~~e~~~~d~~shtIl~V~LvkPkpgvFv~~IqhlLvvaT~~ei~ilgV  156 (1311)
T KOG1900|consen   77 NIECKTDMGIFPEIGRAWITIDNNLFLWNYESDNELAEYDGLSHTILKVGLVKPKPGVFVPEIQHLLVVATPVEIVILGV  156 (1311)
T ss_pred             CcceeeeeccchhhcceEEEeCCeEEEEEcCCCCccccccchhhhheeeeeecCCCCcchhhhheeEEecccceEEEEEE
Confidence            4444455666676666666789999999999988888888777777766542 2       2234444444456777655


Q ss_pred             CccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEec----CCC---c-e-
Q psy10867        149 SRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDL----CTG---E-D-  219 (343)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~----~~~---~-~-  219 (343)
                      .-........            ... ...........|.++....+|  + ++.++.||.  +|.+    ..+   + + 
T Consensus       157 ~~~~~~~~~~------------~f~-~~~~i~~dg~~V~~I~~t~nG--R-IF~~G~dg~--lyEl~Yq~~~gWf~~rc~  218 (1311)
T KOG1900|consen  157 SFDEFTGELS------------IFN-TSFKISVDGVSVNCITYTENG--R-IFFAGRDGN--LYELVYQAEDGWFGSRCR  218 (1311)
T ss_pred             EeccccCccc------------ccc-cceeeecCCceEEEEEeccCC--c-EEEeecCCC--EEEEEEeccCchhhcccc
Confidence            4321111000            000 012222335568888877777  4 445556664  4433    111   1 0 


Q ss_pred             ----------------EEEe-ecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecc
Q psy10867        220 ----------------LLSL-ILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQV  258 (343)
Q Consensus       220 ----------------~~~~-~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~  258 (343)
                                      .... .+..+|..+.....-+.+++-+..|.|.+||+...
T Consensus       219 Kiclt~s~ls~lvPs~~~~~~~~~dpI~qi~ID~SR~IlY~lsek~~v~~Y~i~~~  274 (1311)
T KOG1900|consen  219 KICLTKSVLSSLVPSLLSVPGSSKDPIRQITIDNSRNILYVLSEKGTVSAYDIGGN  274 (1311)
T ss_pred             cccCchhHHHHhhhhhhcCCCCCCCcceeeEeccccceeeeeccCceEEEEEccCC
Confidence                            0111 13568999999998899999999999999999874

>PF05935 Arylsulfotrans: Arylsulfotransferase (ASST); InterPro: IPR010262 This family consists of several bacterial arylsulphotransferase proteins

Probab=94.14  E-value=3.7  Score=36.02  Aligned_cols=173  Identities=12%  Similarity=0.003  Sum_probs=79.7

Q ss_pred             CceEEEEE---cCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEEecCCeEEEEEccCCceEEEecccCC---
Q psy10867         47 NDYVLGVE---KGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQ---  120 (343)
Q Consensus        47 ~~~~~~~~---~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~~~~~---  120 (343)
                      ++.+++..   ...+...+.|.+. .....+.........+...++|.+++... +.+..+|+. |+.+.......+   
T Consensus       114 ~gl~~~~~~~~~~~~~~~~iD~~G-~Vrw~~~~~~~~~~~~~~l~nG~ll~~~~-~~~~e~D~~-G~v~~~~~l~~~~~~  190 (477)
T PF05935_consen  114 DGLYFVNGNDWDSSSYTYLIDNNG-DVRWYLPLDSGSDNSFKQLPNGNLLIGSG-NRLYEIDLL-GKVIWEYDLPGGYYD  190 (477)
T ss_dssp             T-EEEEEETT--BEEEEEEEETTS--EEEEE-GGGT--SSEEE-TTS-EEEEEB-TEEEEE-TT---EEEEEE--TTEE-
T ss_pred             CcEEEEeCCCCCCCceEEEECCCc-cEEEEEccCccccceeeEcCCCCEEEecC-CceEEEcCC-CCEEEeeecCCcccc
Confidence            45555555   2235666666553 22222211111111166778999888754 888888874 665554432221   


Q ss_pred             CeEEEEEecCCCEEEEecC-------------CCeEEEeecCccceeeeeecCCCCCCCCccccccceeee-----eccc
Q psy10867        121 PITIVKWSADSNFIVTGGE-------------DGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHV-----KSQH  182 (343)
Q Consensus       121 ~v~~~~~~~~~~~l~s~~~-------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~  182 (343)
                      .-..+...|+|++|+.+..             .-.|...| .+++......+...................     -...
T Consensus       191 ~HHD~~~l~nGn~L~l~~~~~~~~~~~~~~~~~D~Ivevd-~tG~vv~~wd~~d~ld~~~~~~~~~~~~~~~~~~~~~~D  269 (477)
T PF05935_consen  191 FHHDIDELPNGNLLILASETKYVDEDKDVDTVEDVIVEVD-PTGEVVWEWDFFDHLDPYRDTVLKPYPYGDISGSGGGRD  269 (477)
T ss_dssp             B-S-EEE-TTS-EEEEEEETTEE-TS-EE---S-EEEEE--TTS-EEEEEEGGGTS-TT--TTGGT--SSSSS-SSTTSB
T ss_pred             cccccEECCCCCEEEEEeecccccCCCCccEecCEEEEEC-CCCCEEEEEehHHhCCcccccccccccccccccCCCCCC
Confidence            1246777889998887771             12356666 667666665533221111100000000000     0001


Q ss_pred             ccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee
Q psy10867        183 SLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI  224 (343)
Q Consensus       183 ~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~  224 (343)
                      =..++++.+.+..+ .+++++-.-..|...|.++++....+.
T Consensus       270 W~H~Nsi~yd~~dd-~iivSsR~~s~V~~Id~~t~~i~Wilg  310 (477)
T PF05935_consen  270 WLHINSIDYDPSDD-SIIVSSRHQSAVIKIDYRTGKIKWILG  310 (477)
T ss_dssp             S--EEEEEEETTTT-EEEEEETTT-EEEEEE-TTS-EEEEES
T ss_pred             ccccCccEEeCCCC-eEEEEcCcceEEEEEECCCCcEEEEeC
Confidence            12378899988442 677777667789999988888777664

Arylsulphotransferase (ASST) transfers a sulphate group from phenolic sulphate esters to a phenolic acceptor substrate [].; PDB: 3ETT_B 3ELQ_A 3ETS_A.

>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin

Probab=94.13  E-value=0.47  Score=36.47  Aligned_cols=68  Identities=10%  Similarity=0.047  Sum_probs=45.9

Q ss_pred             eCCceEEEEEcCCCeEEEEeCCCccccee-------cc-------cCCcceEEEEECCCCCEEEEecCCeEEEEEccCCc
Q psy10867         45 LGNDYVLGVEKGKPMIQAWPVNSQEKAQL-------RL-------ICPGRISSMQASPDAAYIAVSIETKLHMWQISSGR  110 (343)
Q Consensus        45 ~~~~~~~~~~~~~~~i~iw~~~~~~~~~~-------~~-------~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~  110 (343)
                      ..++.++.+-..+|.+++||+.+++.+..       +.       .....|..+.++.+|.-+++-.+|..+.|+.+-+.
T Consensus        19 ~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~lsng~~y~y~~~L~~   98 (219)
T PF07569_consen   19 ECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLSNGDSYSYSPDLGC   98 (219)
T ss_pred             EeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEeCCCEEEeccccce
Confidence            34555555555569999999998876521       11       24456888888888887777666778888865444


Q ss_pred             eE
Q psy10867        111 LL  112 (343)
Q Consensus       111 ~~  112 (343)
                      -+
T Consensus        99 W~  100 (219)
T PF07569_consen   99 WI  100 (219)
T ss_pred             eE
Confidence            33

These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus

>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118

Probab=94.08  E-value=2.5  Score=33.84  Aligned_cols=239  Identities=12%  Similarity=0.058  Sum_probs=126.1

Q ss_pred             cceEEEEeCCceEEEEEcCCCeEEEEeCC------Cccccee-ccc-----CCcceEEEEECCCC-------------CE
Q psy10867         38 SPHSMCLLGNDYVLGVEKGKPMIQAWPVN------SQEKAQL-RLI-----CPGRISSMQASPDA-------------AY   92 (343)
Q Consensus        38 ~v~~~~~~~~~~~~~~~~~~~~i~iw~~~------~~~~~~~-~~~-----~~~~v~~~~~s~~~-------------~~   92 (343)
                      ....|+++|.+.+-++....+...+||..      ..+.+.. ...     .....+.+.|+...             .+
T Consensus        24 N~WGia~~p~~~~WVadngT~~~TlYdg~~~~~~g~~~~L~vtiP~~~~~~~~~~PTGiVfN~~~~F~vt~~g~~~~a~F  103 (336)
T TIGR03118        24 NAWGLSYRPGGPFWVANTGTGTATLYVGNPDTQPLVQDPLVVVIPAPPPLAAEGTPTGQVFNGSDTFVVSGEGITGPSRF  103 (336)
T ss_pred             ccceeEecCCCCEEEecCCcceEEeecCCcccccCCccceEEEecCCCCCCCCCCccEEEEeCCCceEEcCCCcccceeE
Confidence            45789999999888877777999999986      1222211 111     22356677776422             24


Q ss_pred             EEEecCCeEEEEEccCCce-----EEEec-ccCCCe-EEEEEec--CCCEEEEec-CCCeEEEeecCccceeeeeecCCC
Q psy10867         93 IAVSIETKLHMWQISSGRL-----LATAS-SHYQPI-TIVKWSA--DSNFIVTGG-EDGTICVWQLSRLICKQTVAFGIP  162 (343)
Q Consensus        93 l~~~~d~~i~v~~~~~~~~-----~~~~~-~~~~~v-~~~~~~~--~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~  162 (343)
                      |.+++||+|.-|...-+..     ...+. ...+.| ..+++..  .+.+|+.+. ..++|.++|-.-......-.+..+
T Consensus       104 if~tEdGTisaW~p~v~~t~~~~~~~~~d~s~~gavYkGLAi~~~~~~~~LYaadF~~g~IDVFd~~f~~~~~~g~F~DP  183 (336)
T TIGR03118       104 LFVTEDGTLSGWAPALGTTRMTRAEIVVDASQQGNVYKGLAVGPTGGGDYLYAANFRQGRIDVFKGSFRPPPLPGSFIDP  183 (336)
T ss_pred             EEEeCCceEEeecCcCCcccccccEEEEccCCCcceeeeeEEeecCCCceEEEeccCCCceEEecCccccccCCCCccCC
Confidence            6678899999998543322     12222 112333 3455543  345555554 578899987654321100000000


Q ss_pred             CCCCCccccccc-eeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCC---cEEEEEEcC--
Q psy10867        163 GSSGKGVTGLTE-PLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDT---RLTCVAFDG--  236 (343)
Q Consensus       163 ~~~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~---~i~~~~~~~--  236 (343)
                      ..    ...... -++.+ +..-.|+-..-.++.  +.=+.+..-|.|-+||+ .++.++++....   ..+.++..|  
T Consensus       184 ~i----PagyAPFnIqni-g~~lyVtYA~qd~~~--~d~v~G~G~G~VdvFd~-~G~l~~r~as~g~LNaPWG~a~APa~  255 (336)
T TIGR03118       184 AL----PAGYAPFNVQNL-GGTLYVTYAQQDADR--NDEVAGAGLGYVNVFTL-NGQLLRRVASSGRLNAPWGLAIAPES  255 (336)
T ss_pred             CC----CCCCCCcceEEE-CCeEEEEEEecCCcc--cccccCCCcceEEEEcC-CCcEEEEeccCCcccCCceeeeChhh
Confidence            00    000000 00000 111112222222332  23344555689999996 688888886544   356677755  


Q ss_pred             ----CCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEcc
Q psy10867        237 ----TEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSI  289 (343)
Q Consensus       237 ----~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~  289 (343)
                          .+.+|+---.||+|..||..+......+.-..+.++.     -..++.|.|..
T Consensus       256 FG~~sg~lLVGNFGDG~InaFD~~sG~~~g~L~~~~G~pi~-----i~GLWgL~fGn  307 (336)
T TIGR03118       256 FGSLSGALLVGNFGDGTINAYDPQSGAQLGQLLDPDNHPVK-----VDGLWSLTFGN  307 (336)
T ss_pred             hCCCCCCeEEeecCCceeEEecCCCCceeeeecCCCCCeEE-----ecCeEEeeeCC
Confidence                4566766677999999998865543332211111111     23467777755

This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.

>KOG2247|consensus

Probab=93.90  E-value=0.0095  Score=49.70  Aligned_cols=142  Identities=10%  Similarity=0.148  Sum_probs=94.9

Q ss_pred             CeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEE
Q psy10867        121 PITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRV  200 (343)
Q Consensus       121 ~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l  200 (343)
                      ......|.|.+.-++.++.+..+..||-....                        ..........-.++|..+++ ..+
T Consensus        36 ~pi~~~w~~e~~nlavaca~tiv~~YD~agq~------------------------~le~n~tg~aldm~wDkegd-vla   90 (615)
T KOG2247|consen   36 GPIIHRWRPEGHNLAVACANTIVIYYDKAGQV------------------------ILELNPTGKALDMAWDKEGD-VLA   90 (615)
T ss_pred             ccceeeEecCCCceehhhhhhHHHhhhhhcce------------------------ecccCCchhHhhhhhccccc-hhh
Confidence            33456778877778888888888889876531                        11122344556778887775 566


Q ss_pred             EEeeCCCeEEEEecCCCceEEEee--cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccc
Q psy10867        201 ASVSHDRTCKIFDLCTGEDLLSLI--LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGH  278 (343)
Q Consensus       201 ~~~~~d~~i~~wd~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~  278 (343)
                      +.+-..+.+.+||+.+... ..+.  ....-.-+.|++....++.+...|.+.|++......           ......|
T Consensus        91 vlAek~~piylwd~n~eyt-qqLE~gg~~s~sll~wsKg~~el~ig~~~gn~viynhgtsR~-----------iiv~Gkh  158 (615)
T KOG2247|consen   91 VLAEKTGPIYLWDVNSEYT-QQLESGGTSSKSLLAWSKGTPELVIGNNAGNIVIYNHGTSRR-----------IIVMGKH  158 (615)
T ss_pred             hhhhcCCCeeechhhhhhH-HHHhccCcchHHHHhhccCCccccccccccceEEEeccchhh-----------hhhhccc
Confidence            6777889999999875432 1122  122222277899899999999999999998876433           2233348


Q ss_pred             cCcEEEEEEccCCCEEEEEeCC
Q psy10867        279 EKQVTSLSCSITGITLLSSSAD  300 (343)
Q Consensus       279 ~~~v~~~~~s~~~~~l~s~~~d  300 (343)
                      ...++++++.+.+. .+.++.|
T Consensus       159 ~RRgtq~av~lEd~-vil~dcd  179 (615)
T KOG2247|consen  159 QRRGTQIAVTLEDY-VILCDCD  179 (615)
T ss_pred             ccceeEEEecccce-eeecCcH
Confidence            88999999988764 3333333

>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates

Probab=93.90  E-value=0.39  Score=42.93  Aligned_cols=82  Identities=26%  Similarity=0.341  Sum_probs=44.9

Q ss_pred             CCCCEEEEEcCCCcEEEEEeeccc---cc-ccccccCC---CCCCcc--------ccccCcEEEEEEcc----CCCEEEE
Q psy10867        236 GTEDNIYMGTSEGVIKSFCLRQVP---RT-RDHHIQDS---TSNPDF--------IGHEKQVTSLSCSI----TGITLLS  296 (343)
Q Consensus       236 ~~~~~l~~~~~d~~i~i~d~~~~~---~~-~~~~~~~~---~~~~~~--------~~~~~~v~~~~~s~----~~~~l~s  296 (343)
                      ++...++++..||.+.........   .. .+......   ..+..+        ......+..+++++    +..+|++
T Consensus       156 ~~~~~l~v~~~dG~ll~l~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~t  235 (547)
T PF11715_consen  156 DSEANLVVSLQDGGLLRLKRSSGDSDGSVWSEELFNDSSWLRSLSGLFPWSYRGDNSSSSVAASLAVSSSEINDDTFLFT  235 (547)
T ss_dssp             -SSSBEEEEESSS-EEEEEES----SSS-EE----STHHHHHCCTTTS-TT---SSSS---EEEEEE-----ETTTEEEE
T ss_pred             cCCCEEEEEECCCCeEEEECCcccCCCCeeEEEEeCCCchhhhhhCcCCcccccCCCCCCccceEEEecceeCCCCEEEE
Confidence            466778888888888888766521   10 00000000   000000        11123455566666    6789999


Q ss_pred             EeCCCcEEEEecccceeeeec
Q psy10867        297 SSADETLKIWHTISRQCLRTI  317 (343)
Q Consensus       297 ~~~dg~i~iwd~~~~~~~~~~  317 (343)
                      .+.|+.+|+||+.+++++.+.
T Consensus       236 l~~D~~LRiW~l~t~~~~~~~  256 (547)
T PF11715_consen  236 LSRDHTLRIWSLETGQCLATI  256 (547)
T ss_dssp             EETTSEEEEEETTTTCEEEEE
T ss_pred             EeCCCeEEEEECCCCeEEEEe
Confidence            999999999999999996654

The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.

>PHA02790 Kelch-like protein; Provisional

Probab=93.81  E-value=4.4  Score=35.67  Aligned_cols=128  Identities=8%  Similarity=-0.057  Sum_probs=60.2

Q ss_pred             eEEEEecCCceEEEE--EecCCCCcceEEEEeCCceEEEEEcCC--CeEEEEeCCCcccceecccCCcceEEEEECCCCC
Q psy10867         16 AISVWEPKGGTLLMS--YKGASVLSPHSMCLLGNDYVLGVEKGK--PMIQAWPVNSQEKAQLRLICPGRISSMQASPDAA   91 (343)
Q Consensus        16 ~i~iwd~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~   91 (343)
                      .+..||..+++-...  +....  .-.+++. -++.+.+.|+.+  ..+..||..+++......-...........-+|+
T Consensus       288 ~v~~Ydp~~~~W~~~~~m~~~r--~~~~~v~-~~~~iYviGG~~~~~sve~ydp~~n~W~~~~~l~~~r~~~~~~~~~g~  364 (480)
T PHA02790        288 NAIAVNYISNNWIPIPPMNSPR--LYASGVP-ANNKLYVVGGLPNPTSVERWFHGDAAWVNMPSLLKPRCNPAVASINNV  364 (480)
T ss_pred             eEEEEECCCCEEEECCCCCchh--hcceEEE-ECCEEEEECCcCCCCceEEEECCCCeEEECCCCCCCCcccEEEEECCE
Confidence            566788776543332  22211  1122332 356666655532  4678888766544322111111111111122566


Q ss_pred             EEEE-ecC---CeEEEEEccCCceEEE--ecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCcc
Q psy10867         92 YIAV-SIE---TKLHMWQISSGRLLAT--ASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRL  151 (343)
Q Consensus        92 ~l~~-~~d---~~i~v~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~  151 (343)
                      +.+. |.+   ..+..||..+.+-...  +....... +++ .-+++..+.|+   .+.+||..+.
T Consensus       365 IYviGG~~~~~~~ve~ydp~~~~W~~~~~m~~~r~~~-~~~-~~~~~IYv~GG---~~e~ydp~~~  425 (480)
T PHA02790        365 IYVIGGHSETDTTTEYLLPNHDQWQFGPSTYYPHYKS-CAL-VFGRRLFLVGR---NAEFYCESSN  425 (480)
T ss_pred             EEEecCcCCCCccEEEEeCCCCEEEeCCCCCCccccc-eEE-EECCEEEEECC---ceEEecCCCC
Confidence            6554 433   4577899877654332  11111111 222 23566666664   4677887654

>PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes

Probab=93.77  E-value=2.1  Score=33.38  Aligned_cols=125  Identities=11%  Similarity=0.064  Sum_probs=67.3

Q ss_pred             ceEEEEeecCCCceEEEEeeC-C--CeEEEEecCC--CceEE-----EeecCCcEEEEEEcCCCCEEEEEcCCCc-EEEE
Q psy10867        185 PVTHVTLSKLGAKSRVASVSH-D--RTCKIFDLCT--GEDLL-----SLILDTRLTCVAFDGTEDNIYMGTSEGV-IKSF  253 (343)
Q Consensus       185 ~v~~~~~~~~~~~~~l~~~~~-d--~~i~~wd~~~--~~~~~-----~~~~~~~i~~~~~~~~~~~l~~~~~d~~-i~i~  253 (343)
                      ...+-.+.++|  .++.+|+. +  ..+++++...  ..+..     .+.....-.+...-|||+.|++|+...- ..+|
T Consensus        68 FCSgg~~L~dG--~ll~tGG~~~G~~~ir~~~p~~~~~~~~w~e~~~~m~~~RWYpT~~~L~DG~vlIvGG~~~~t~E~~  145 (243)
T PF07250_consen   68 FCSGGAFLPDG--RLLQTGGDNDGNKAIRIFTPCTSDGTCDWTESPNDMQSGRWYPTATTLPDGRVLIVGGSNNPTYEFW  145 (243)
T ss_pred             cccCcCCCCCC--CEEEeCCCCccccceEEEecCCCCCCCCceECcccccCCCccccceECCCCCEEEEeCcCCCccccc
Confidence            34445677888  78888775 2  4578887544  11111     1223334556667789999999887632 2333


Q ss_pred             Eeecc-cccccccccCCCCCCccc--cccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc
Q psy10867        254 CLRQV-PRTRDHHIQDSTSNPDFI--GHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ  318 (343)
Q Consensus       254 d~~~~-~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~  318 (343)
                      .-... ........     +....  .....--.+...|+|++++.+..+.  .|||..+++.+..+.
T Consensus       146 P~~~~~~~~~~~~~-----l~~~~~~~~~nlYP~~~llPdG~lFi~an~~s--~i~d~~~n~v~~~lP  206 (243)
T PF07250_consen  146 PPKGPGPGPVTLPF-----LSQTSDTLPNNLYPFVHLLPDGNLFIFANRGS--IIYDYKTNTVVRTLP  206 (243)
T ss_pred             CCccCCCCceeeec-----chhhhccCccccCceEEEcCCCCEEEEEcCCc--EEEeCCCCeEEeeCC
Confidence            32111 00000000     00000  0011112355679999998887654  567888887777765

Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium [].

>PF12768 Rax2: Cortical protein marker for cell polarity

Probab=93.66  E-value=3.1  Score=33.39  Aligned_cols=117  Identities=12%  Similarity=0.155  Sum_probs=66.6

Q ss_pred             CeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEec------CCCeEEEeecCccceeeeeecCCCCCCCCccccc
Q psy10867         99 TKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGG------EDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGL  172 (343)
Q Consensus        99 ~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~  172 (343)
                      ..|.+||..+.+-...-.+-.+.|+.+.|..+.++++.|.      ....+..||+.+..-..                 
T Consensus        16 ~~lC~yd~~~~qW~~~g~~i~G~V~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~~~~~w~~-----------------   78 (281)
T PF12768_consen   16 PGLCLYDTDNSQWSSPGNGISGTVTDLQWASNNQLLVGGNFTLNGTNSSNLATYDFKNQTWSS-----------------   78 (281)
T ss_pred             CEEEEEECCCCEeecCCCCceEEEEEEEEecCCEEEEEEeeEECCCCceeEEEEecCCCeeee-----------------
Confidence            4699999887766555555678899999986666666653      34568888887752111                 


Q ss_pred             cceeee-e-cccccceEEEEeecCCCceEEEEee-C--CCeEEEEecCCCceEEE--eecCCcEEEEEEc
Q psy10867        173 TEPLHV-K-SQHSLPVTHVTLSKLGAKSRVASVS-H--DRTCKIFDLCTGEDLLS--LILDTRLTCVAFD  235 (343)
Q Consensus       173 ~~~~~~-~-~~~~~~v~~~~~~~~~~~~~l~~~~-~--d~~i~~wd~~~~~~~~~--~~~~~~i~~~~~~  235 (343)
                         ... . ..-.++|..+.+......++.+.|. .  +..|..||-.+...+..  +.....|..+.+-
T Consensus        79 ---~~~~~s~~ipgpv~a~~~~~~d~~~~~~aG~~~~g~~~l~~~dGs~W~~i~~~~~~~~t~I~~l~~~  145 (281)
T PF12768_consen   79 ---LGGGSSNSIPGPVTALTFISNDGSNFWVAGRSANGSTFLMKYDGSSWSSIGSDILGSGTTIRGLQVL  145 (281)
T ss_pred             ---cCCcccccCCCcEEEEEeeccCCceEEEeceecCCCceEEEEcCCceEeccccccCCCCEEEEEEEE
Confidence               000 0 1224677777775443324555544 2  34566776544443333  1123345555443

>PF05935 Arylsulfotrans: Arylsulfotransferase (ASST); InterPro: IPR010262 This family consists of several bacterial arylsulphotransferase proteins

Probab=93.59  E-value=4.7  Score=35.37  Aligned_cols=125  Identities=8%  Similarity=-0.000  Sum_probs=61.1

Q ss_pred             EEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCCcE----EEEEEcCCCCEEEEEcC--------------CC--
Q psy10867        189 VTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRL----TCVAFDGTEDNIYMGTS--------------EG--  248 (343)
Q Consensus       189 ~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i----~~~~~~~~~~~l~~~~~--------------d~--  248 (343)
                      +...++|  .+++...  ..++.+|+ .|+.+..+..+...    ..+...|+|++|+.+..              |.  
T Consensus       153 ~~~l~nG--~ll~~~~--~~~~e~D~-~G~v~~~~~l~~~~~~~HHD~~~l~nGn~L~l~~~~~~~~~~~~~~~~~D~Iv  227 (477)
T PF05935_consen  153 FKQLPNG--NLLIGSG--NRLYEIDL-LGKVIWEYDLPGGYYDFHHDIDELPNGNLLILASETKYVDEDKDVDTVEDVIV  227 (477)
T ss_dssp             EEE-TTS---EEEEEB--TEEEEE-T-T--EEEEEE--TTEE-B-S-EEE-TTS-EEEEEEETTEE-TS-EE---S-EEE
T ss_pred             eeEcCCC--CEEEecC--CceEEEcC-CCCEEEeeecCCcccccccccEECCCCCEEEEEeecccccCCCCccEecCEEE
Confidence            5566777  5555443  78888997 57777777655533    56788899998887761              11  


Q ss_pred             -------cEEEEEeecccccccccccCC---CCCCcccccc--CcEEEEEEcc-CCCEEEEEeCCCcEEEEecccceeee
Q psy10867        249 -------VIKSFCLRQVPRTRDHHIQDS---TSNPDFIGHE--KQVTSLSCSI-TGITLLSSSADETLKIWHTISRQCLR  315 (343)
Q Consensus       249 -------~i~i~d~~~~~~~~~~~~~~~---~~~~~~~~~~--~~v~~~~~s~-~~~~l~s~~~dg~i~iwd~~~~~~~~  315 (343)
                             .+..||+...-..........   ..........  -.++++.+.+ ++.+|+|+-.-..|...|.++++...
T Consensus       228 evd~tG~vv~~wd~~d~ld~~~~~~~~~~~~~~~~~~~~~~DW~H~Nsi~yd~~dd~iivSsR~~s~V~~Id~~t~~i~W  307 (477)
T PF05935_consen  228 EVDPTGEVVWEWDFFDHLDPYRDTVLKPYPYGDISGSGGGRDWLHINSIDYDPSDDSIIVSSRHQSAVIKIDYRTGKIKW  307 (477)
T ss_dssp             EE-TTS-EEEEEEGGGTS-TT--TTGGT--SSSSS-SSTTSBS--EEEEEEETTTTEEEEEETTT-EEEEEE-TTS-EEE
T ss_pred             EECCCCCEEEEEehHHhCCcccccccccccccccccCCCCCCccccCccEEeCCCCeEEEEcCcceEEEEEECCCCcEEE
Confidence                   233444433211000000000   0000000111  1378899988 55666666556688888988888877


Q ss_pred             ecc
Q psy10867        316 TIQ  318 (343)
Q Consensus       316 ~~~  318 (343)
                      .+.
T Consensus       308 ilg  310 (477)
T PF05935_consen  308 ILG  310 (477)
T ss_dssp             EES
T ss_pred             EeC
Confidence            765

Arylsulphotransferase (ASST) transfers a sulphate group from phenolic sulphate esters to a phenolic acceptor substrate [].; PDB: 3ETT_B 3ELQ_A 3ETS_A.

>PRK13684 Ycf48-like protein; Provisional

Probab=93.55  E-value=3.7  Score=34.06  Aligned_cols=143  Identities=11%  Similarity=-0.036  Sum_probs=77.8

Q ss_pred             ccceEEEEeecCCCceEEEEeeCCCeEEE-EecCCCceEEEee--cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeeccc
Q psy10867        183 SLPVTHVTLSKLGAKSRVASVSHDRTCKI-FDLCTGEDLLSLI--LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVP  259 (343)
Q Consensus       183 ~~~v~~~~~~~~~~~~~l~~~~~d~~i~~-wd~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~  259 (343)
                      ...+..+.+.|++  .++++ +..|.+.. +| ..++.-....  ....+..+.+.++++.++++ ..|.+++=......
T Consensus       172 ~g~~~~i~~~~~g--~~v~~-g~~G~i~~s~~-~gg~tW~~~~~~~~~~l~~i~~~~~g~~~~vg-~~G~~~~~s~d~G~  246 (334)
T PRK13684        172 AGVVRNLRRSPDG--KYVAV-SSRGNFYSTWE-PGQTAWTPHQRNSSRRLQSMGFQPDGNLWMLA-RGGQIRFNDPDDLE  246 (334)
T ss_pred             cceEEEEEECCCC--eEEEE-eCCceEEEEcC-CCCCeEEEeeCCCcccceeeeEcCCCCEEEEe-cCCEEEEccCCCCC
Confidence            4567888998887  55544 44555543 22 1222222222  35678999999999887776 45655421122111


Q ss_pred             ccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc----cCCceEEEEEccCCCee
Q psy10867        260 RTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ----HKGPVLGAFLGLLPPAI  335 (343)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~----~~~~v~~~~~sp~~~~l  335 (343)
                      .-...       ..........+..+.+.|+++.++ ++.+|.+.. ....|+.-...+    .......+.|..+++.+
T Consensus       247 sW~~~-------~~~~~~~~~~l~~v~~~~~~~~~~-~G~~G~v~~-S~d~G~tW~~~~~~~~~~~~~~~~~~~~~~~~~  317 (334)
T PRK13684        247 SWSKP-------IIPEITNGYGYLDLAYRTPGEIWA-GGGNGTLLV-SKDGGKTWEKDPVGEEVPSNFYKIVFLDPEKGF  317 (334)
T ss_pred             ccccc-------cCCccccccceeeEEEcCCCCEEE-EcCCCeEEE-eCCCCCCCeECCcCCCCCcceEEEEEeCCCceE
Confidence            10000       000001123578889998877555 445675553 344444433332    22357888888888877


Q ss_pred             eecc
Q psy10867        336 HDYD  339 (343)
Q Consensus       336 ~~~~  339 (343)
                      +++.
T Consensus       318 ~~G~  321 (334)
T PRK13684        318 VLGQ  321 (334)
T ss_pred             EECC
Confidence            7764

>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]

Probab=93.52  E-value=2.4  Score=31.81  Aligned_cols=173  Identities=11%  Similarity=0.037  Sum_probs=92.3

Q ss_pred             CCeEEEEecCCceEEEEEecCCCCcce--EEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCC
Q psy10867         14 SGAISVWEPKGGTLLMSYKGASVLSPH--SMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAA   91 (343)
Q Consensus        14 dg~i~iwd~~~~~~~~~~~~~~~~~v~--~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~   91 (343)
                      ...|++||+.+|+.+.+-+-... .+.  .+.-..|..+..+-.+ |.-..+|.++.+++..+. -++.=..+.  .|++
T Consensus        67 ~S~ir~~~L~~gq~~~s~~l~~~-~~FgEGit~~gd~~y~LTw~e-gvaf~~d~~t~~~lg~~~-y~GeGWgLt--~d~~  141 (262)
T COG3823          67 FSKIRVSDLTTGQEIFSEKLAPD-TVFGEGITKLGDYFYQLTWKE-GVAFKYDADTLEELGRFS-YEGEGWGLT--SDDK  141 (262)
T ss_pred             cceeEEEeccCceEEEEeecCCc-cccccceeeccceEEEEEecc-ceeEEEChHHhhhhcccc-cCCcceeee--cCCc
Confidence            35789999998988776544321 111  2222234444445444 888999998887775442 233334444  3444


Q ss_pred             EEEE-ecCCeEEEEEccCCceEEEe----ccc-CCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCC
Q psy10867         92 YIAV-SIETKLHMWQISSGRLLATA----SSH-YQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSS  165 (343)
Q Consensus        92 ~l~~-~~d~~i~v~~~~~~~~~~~~----~~~-~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~  165 (343)
                      -|.. ....+++.-|.++-....+.    .+. -..+..+.|- +|...+-.=.+..|...|.++++....+.....   
T Consensus       142 ~LimsdGsatL~frdP~tfa~~~~v~VT~~g~pv~~LNELE~V-dG~lyANVw~t~~I~rI~p~sGrV~~widlS~L---  217 (262)
T COG3823         142 NLIMSDGSATLQFRDPKTFAELDTVQVTDDGVPVSKLNELEWV-DGELYANVWQTTRIARIDPDSGRVVAWIDLSGL---  217 (262)
T ss_pred             ceEeeCCceEEEecCHHHhhhcceEEEEECCeecccccceeee-ccEEEEeeeeecceEEEcCCCCcEEEEEEccCC---
Confidence            4444 34456777776654333222    211 1223344553 455554444445566666666665555442211   


Q ss_pred             CCccccccceeeeecccccceEEEEeecCCCceEEEEe
Q psy10867        166 GKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASV  203 (343)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~  203 (343)
                             ......-..+..-.+.+++.|.++ +++++|
T Consensus       218 -------~~~~~~~~~~~nvlNGIA~~~~~~-r~~iTG  247 (262)
T COG3823         218 -------LKELNLDKSNDNVLNGIAHDPQQD-RFLITG  247 (262)
T ss_pred             -------chhcCccccccccccceeecCcCC-eEEEec
Confidence                   112222233556678899999874 566665

>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat

Probab=93.49  E-value=0.58  Score=24.61  Aligned_cols=37  Identities=16%  Similarity=0.104  Sum_probs=26.7

Q ss_pred             eEEEEeeCCCeEEEEecCCCceEEEeecCCcEEEEEE
Q psy10867        198 SRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAF  234 (343)
Q Consensus       198 ~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~  234 (343)
                      .++++...++.|.++|..+++.+..+........++|
T Consensus         5 ~lyv~~~~~~~v~~id~~~~~~~~~i~vg~~P~~i~~   41 (42)
T TIGR02276         5 KLYVTNSGSNTVSVIDTATNKVIATIPVGGYPFGVAV   41 (42)
T ss_pred             EEEEEeCCCCEEEEEECCCCeEEEEEECCCCCceEEe
Confidence            4555555689999999999888888776555555554

This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).

>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal

Probab=93.36  E-value=1.8  Score=29.88  Aligned_cols=112  Identities=11%  Similarity=0.129  Sum_probs=70.5

Q ss_pred             EeecCCCceEEEEeeCCCeEEEEecCCC--------ceEEEeecCCcEEEEEEcC-----CCCEEEEEcCCCcEEEEEee
Q psy10867        190 TLSKLGAKSRVASVSHDRTCKIFDLCTG--------EDLLSLILDTRLTCVAFDG-----TEDNIYMGTSEGVIKSFCLR  256 (343)
Q Consensus       190 ~~~~~~~~~~l~~~~~d~~i~~wd~~~~--------~~~~~~~~~~~i~~~~~~~-----~~~~l~~~~~d~~i~i~d~~  256 (343)
                      .|....  .-|++++.-|+|.|++....        ..+..+.....|++++--+     +...|+.|+ ...+..||+.
T Consensus         5 kfDG~~--pcL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~LNin~~italaaG~l~~~~~~D~LliGt-~t~llaYDV~   81 (136)
T PF14781_consen    5 KFDGVH--PCLACATTGGKVFIHNPHERGQRTGRQDSDISFLNINQEITALAAGRLKPDDGRDCLLIGT-QTSLLAYDVE   81 (136)
T ss_pred             EeCCCc--eeEEEEecCCEEEEECCCccccccccccCceeEEECCCceEEEEEEecCCCCCcCEEEEec-cceEEEEEcc
Confidence            444444  56888888899999987633        3456667788888886544     345666665 5678899998


Q ss_pred             cccccccccccCCCCCCccccccCcEEEEEEcc---CCCEEEEEeCCCcEEEEecccceeeee
Q psy10867        257 QVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSI---TGITLLSSSADETLKIWHTISRQCLRT  316 (343)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~---~~~~l~s~~~dg~i~iwd~~~~~~~~~  316 (343)
                      ......            ++.-...|.++.+-.   ...-++..+.+..|.-||.+-.+...+
T Consensus        82 ~N~d~F------------yke~~DGvn~i~~g~~~~~~~~l~ivGGncsi~Gfd~~G~e~fWt  132 (136)
T PF14781_consen   82 NNSDLF------------YKEVPDGVNAIVIGKLGDIPSPLVIVGGNCSIQGFDYEGNEIFWT  132 (136)
T ss_pred             cCchhh------------hhhCccceeEEEEEecCCCCCcEEEECceEEEEEeCCCCcEEEEE
Confidence            754432            222345667766532   223455555567888888765555544

>PF12768 Rax2: Cortical protein marker for cell polarity

Probab=93.15  E-value=3.7  Score=32.91  Aligned_cols=114  Identities=11%  Similarity=0.101  Sum_probs=67.1

Q ss_pred             CeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEc------CCCeEEEEeCCCcccceecc----cCCcceEEE
Q psy10867         15 GAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEK------GKPMIQAWPVNSQEKAQLRL----ICPGRISSM   84 (343)
Q Consensus        15 g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~------~~~~i~iw~~~~~~~~~~~~----~~~~~v~~~   84 (343)
                      ..|.+||..+.+-..--.+-.+ .|+++.|..+.+++++|.      ....+..||.++........    .-+++|..+
T Consensus        16 ~~lC~yd~~~~qW~~~g~~i~G-~V~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~~~~~w~~~~~~~s~~ipgpv~a~   94 (281)
T PF12768_consen   16 PGLCLYDTDNSQWSSPGNGISG-TVTDLQWASNNQLLVGGNFTLNGTNSSNLATYDFKNQTWSSLGGGSSNSIPGPVTAL   94 (281)
T ss_pred             CEEEEEECCCCEeecCCCCceE-EEEEEEEecCCEEEEEEeeEECCCCceeEEEEecCCCeeeecCCcccccCCCcEEEE
Confidence            5689999877665554444456 899999997788888774      34678899988776543222    234778888


Q ss_pred             EECC-CC-CEEEEe--cCC--eEEEEEccCCceEEE-ecccCCCeEEEEEec
Q psy10867         85 QASP-DA-AYIAVS--IET--KLHMWQISSGRLLAT-ASSHYQPITIVKWSA  129 (343)
Q Consensus        85 ~~s~-~~-~~l~~~--~d~--~i~v~~~~~~~~~~~-~~~~~~~v~~~~~~~  129 (343)
                      .+.. |+ ++.++|  .++  .|..||-.+-..+.. .......|..+.+-|
T Consensus        95 ~~~~~d~~~~~~aG~~~~g~~~l~~~dGs~W~~i~~~~~~~~t~I~~l~~~~  146 (281)
T PF12768_consen   95 TFISNDGSNFWVAGRSANGSTFLMKYDGSSWSSIGSDILGSGTTIRGLQVLP  146 (281)
T ss_pred             EeeccCCceEEEeceecCCCceEEEEcCCceEeccccccCCCCEEEEEEEEe
Confidence            7743 33 344432  333  466665333222222 112233455555543

>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus

Probab=93.02  E-value=5.2  Score=34.14  Aligned_cols=82  Identities=15%  Similarity=0.135  Sum_probs=53.2

Q ss_pred             eeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeec--CCcEEEEEEcCC-----------------
Q psy10867        177 HVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLIL--DTRLTCVAFDGT-----------------  237 (343)
Q Consensus       177 ~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~--~~~i~~~~~~~~-----------------  237 (343)
                      ..+......+.+++.+|.+  .+.++...-|.|.++|+.++..++.++.  +..+.-+.....                 
T Consensus       301 ~~l~D~~R~~~~i~~sP~~--~laA~tDslGRV~LiD~~~~~vvrmWKGYRdAqc~wi~~~~~~~~~~~~~~~~~~~~~~  378 (415)
T PF14655_consen  301 FGLPDSKREGESICLSPSG--RLAAVTDSLGRVLLIDVARGIVVRMWKGYRDAQCGWIEVPEEGDRDRSNSNSPKSSSRF  378 (415)
T ss_pred             EeeccCCceEEEEEECCCC--CEEEEEcCCCcEEEEECCCChhhhhhccCccceEEEEEeecccccccccccccCCCCcc
Confidence            3444556678999999998  7888877789999999999887766652  111111111110                 


Q ss_pred             CCEE-EEEcCCCcEEEEEeecccc
Q psy10867        238 EDNI-YMGTSEGVIKSFCLRQVPR  260 (343)
Q Consensus       238 ~~~l-~~~~~d~~i~i~d~~~~~~  260 (343)
                      ..+| +-+-.-|.|.||.++.+.+
T Consensus       379 ~l~LvIyaprRg~lEvW~~~~g~R  402 (415)
T PF14655_consen  379 ALFLVIYAPRRGILEVWSMRQGPR  402 (415)
T ss_pred             eEEEEEEeccCCeEEEEecCCCCE
Confidence            1122 3356688899998876543

>PF13449 Phytase-like: Esterase-like activity of phytase

Probab=92.95  E-value=4.6  Score=33.39  Aligned_cols=156  Identities=15%  Similarity=0.135  Sum_probs=86.9

Q ss_pred             CcceEEEEECC-CCCEEEEecCCe------EEEEEccC--C--ceEE-----EecccCC--------CeEEEEEecCCCE
Q psy10867         78 PGRISSMQASP-DAAYIAVSIETK------LHMWQISS--G--RLLA-----TASSHYQ--------PITIVKWSADSNF  133 (343)
Q Consensus        78 ~~~v~~~~~s~-~~~~l~~~~d~~------i~v~~~~~--~--~~~~-----~~~~~~~--------~v~~~~~~~~~~~  133 (343)
                      -+.+..+.+.+ ++.+++.+.++.      +..+++..  +  ..+.     .+....+        ..-+|++.+++.+
T Consensus        19 ~GGlSgl~~~~~~~~~~avSD~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~G~~~~~~~~D~Egi~~~~~g~~   98 (326)
T PF13449_consen   19 FGGLSGLDYDPDDGRFYAVSDRGPNKGPPRFYTFRIDYDQGGIGGVTILDMIPLRDPDGQPFPKNGLDPEGIAVPPDGSF   98 (326)
T ss_pred             cCcEeeEEEeCCCCEEEEEECCCCCCCCCcEEEEEeeccCCCccceEeccceeccCCCCCcCCcCCCChhHeEEecCCCE
Confidence            45678888984 667777777776      66665543  1  1111     1111111        3347888778887


Q ss_pred             EEEecCC------CeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeC--
Q psy10867        134 IVTGGED------GTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSH--  205 (343)
Q Consensus       134 l~s~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~--  205 (343)
                      +++.-.+      ..|..++.. +.....+..+........       -..-........+++++|++  +.|+++.+  
T Consensus        99 ~is~E~~~~~~~~p~I~~~~~~-G~~~~~~~vP~~~~~~~~-------~~~~~~~N~G~E~la~~~dG--~~l~~~~E~~  168 (326)
T PF13449_consen   99 WISSEGGRTGGIPPRIRRFDLD-GRVIRRFPVPAAFLPDAN-------GTSGRRNNRGFEGLAVSPDG--RTLFAAMESP  168 (326)
T ss_pred             EEEeCCccCCCCCCEEEEECCC-CcccceEccccccccccC-------ccccccCCCCeEEEEECCCC--CEEEEEECcc
Confidence            7776666      778888876 544444322111000000       00122355678899999998  54554433  


Q ss_pred             ---CC---------eEEE--EecCC-CceEEEe--ec--------CCcEEEEEEcCCCCEEEE
Q psy10867        206 ---DR---------TCKI--FDLCT-GEDLLSL--IL--------DTRLTCVAFDGTEDNIYM  243 (343)
Q Consensus       206 ---d~---------~i~~--wd~~~-~~~~~~~--~~--------~~~i~~~~~~~~~~~l~~  243 (343)
                         |+         .+++  ||..+ ++....+  ..        ...+..+.+-+++++|+.
T Consensus       169 l~~d~~~~~~~~~~~~ri~~~d~~~~~~~~~~~~y~ld~~~~~~~~~~isd~~al~d~~lLvL  231 (326)
T PF13449_consen  169 LKQDGPRANPDNGSPLRILRYDPKTPGEPVAEYAYPLDPPPTAPGDNGISDIAALPDGRLLVL  231 (326)
T ss_pred             ccCCCcccccccCceEEEEEecCCCCCccceEEEEeCCccccccCCCCceeEEEECCCcEEEE
Confidence               22         1444  45544 3222222  22        356889999999997776

>COG5290 IkappaB kinase complex, IKAP component [Transcription]

Probab=92.92  E-value=2.1  Score=38.95  Aligned_cols=91  Identities=13%  Similarity=0.171  Sum_probs=55.9

Q ss_pred             EEEEeCCceEEEEEcCCC-----eEEEEeCCCcccc--eecccCCcceEEEEECCCCCEEEEecCCeEEEEEccCCceEE
Q psy10867         41 SMCLLGNDYVLGVEKGKP-----MIQAWPVNSQEKA--QLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLA  113 (343)
Q Consensus        41 ~~~~~~~~~~~~~~~~~~-----~i~iw~~~~~~~~--~~~~~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~  113 (343)
                      -+.|-|+|..+++-..||     .+..+.-+..+.-  ....+....+..++|.-....++.+..+.+++|-..+-.--.
T Consensus       251 ~LSWkpqgS~~ati~td~~~~S~~ViFfErNGLrHGef~lr~~~dEk~~~~~wn~~s~vlav~~~n~~~lwttkNyhWYL  330 (1243)
T COG5290         251 QLSWKPQGSKYATIGTDGCSTSESVIFFERNGLRHGEFDLRVGCDEKAFLENWNLLSTVLAVAEGNLLKLWTTKNYHWYL  330 (1243)
T ss_pred             ccccccCCceeeeeccCCCCCcceEEEEccCCcccCCccccCCchhhhhhhhhhHHHHHHHHhhcceEEEEEccceEEEE
Confidence            478889998887755333     4555544332211  122244556777888877778888888999999865443322


Q ss_pred             EecccCCCeEEEEEecCC
Q psy10867        114 TASSHYQPITIVKWSADS  131 (343)
Q Consensus       114 ~~~~~~~~v~~~~~~~~~  131 (343)
                      .....-..+.-+.|+|..
T Consensus       331 K~e~~ip~~s~vkwhpe~  348 (1243)
T COG5290         331 KVERQIPGISYVKWHPEE  348 (1243)
T ss_pred             EEeecCCCcceeeecccc
Confidence            222233456778899844

>COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only]

Probab=92.76  E-value=0.53  Score=39.51  Aligned_cols=154  Identities=12%  Similarity=0.020  Sum_probs=87.7

Q ss_pred             eeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEE-Eeec--CC----cEE-EEEEcCCCCEEEEEcCCC
Q psy10867        177 HVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLL-SLIL--DT----RLT-CVAFDGTEDNIYMGTSEG  248 (343)
Q Consensus       177 ~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~-~~~~--~~----~i~-~~~~~~~~~~l~~~~~d~  248 (343)
                      ..+......+..+-..|++  +.+..-+. .++.++++.+..... ++..  ++    .|+ ++..-..|..+.+++.||
T Consensus       214 ~~L~~~~~~v~qllL~Pdg--~~LYv~~g-~~~~v~~L~~r~l~~rkl~~dspg~~~~~Vte~l~lL~Gg~SLLv~~~dG  290 (733)
T COG4590         214 RLLSVPFSDVSQLLLTPDG--KTLYVRTG-SELVVALLDKRSLQIRKLVDDSPGDSRHQVTEQLYLLSGGFSLLVVHEDG  290 (733)
T ss_pred             hhcCCCccchHhhEECCCC--CEEEEecC-CeEEEEeecccccchhhhhhcCCCchHHHHHHHHHHHhCceeEEEEcCCC
Confidence            3345556678888899999  55555443 678888876543221 1111  11    122 222233466788889999


Q ss_pred             cEEEE-EeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecccCCceEEEE
Q psy10867        249 VIKSF-CLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQHKGPVLGAF  327 (343)
Q Consensus       249 ~i~i~-d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~  327 (343)
                      .|.-| |.+........+      +..++-...++..+.-..+.+-+++-...|++..+.....+.+-.-..-..+.-++
T Consensus       291 ~vsQWFdvr~~~~p~l~h------~R~f~l~pa~~~~l~pe~~rkgF~~l~~~G~L~~f~st~~~~lL~~~~~~~~~~~~  364 (733)
T COG4590         291 LVSQWFDVRRDGQPHLNH------IRNFKLAPAEVQFLLPETNRKGFYSLYRNGTLQSFYSTSEKLLLFERAYQAPQLVA  364 (733)
T ss_pred             ceeeeeeeecCCCCccee------eeccccCcccceeeccccccceEEEEcCCCceeeeecccCcceehhhhhcCcceee
Confidence            88776 555443322111      12222222344444333344567788888888888755444433333334677889


Q ss_pred             EccCCCeeeecc
Q psy10867        328 LGLLPPAIHDYD  339 (343)
Q Consensus       328 ~sp~~~~l~~~~  339 (343)
                      +||++.+|++-.
T Consensus       365 ~Sp~~~~Ll~e~  376 (733)
T COG4590         365 MSPNQAYLLSED  376 (733)
T ss_pred             eCcccchheeec
Confidence            999999988643

>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=92.07  E-value=0.77  Score=23.78  Aligned_cols=28  Identities=14%  Similarity=0.154  Sum_probs=18.5

Q ss_pred             cCcEEEEEEccCCCEEEEE-eCC--CcEEEE
Q psy10867        279 EKQVTSLSCSITGITLLSS-SAD--ETLKIW  306 (343)
Q Consensus       279 ~~~v~~~~~s~~~~~l~s~-~~d--g~i~iw  306 (343)
                      ...-....|||||+.|+-. ..+  |.-.||
T Consensus         8 ~~~~~~p~~SpDGk~i~f~s~~~~~g~~diy   38 (39)
T PF07676_consen    8 PGDDGSPAWSPDGKYIYFTSNRNDRGSFDIY   38 (39)
T ss_dssp             SSSEEEEEE-TTSSEEEEEEECT--SSEEEE
T ss_pred             CccccCEEEecCCCEEEEEecCCCCCCcCEE
Confidence            4456788999999987744 444  555555

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....

>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates

Probab=92.00  E-value=0.61  Score=41.71  Aligned_cols=92  Identities=18%  Similarity=0.135  Sum_probs=45.2

Q ss_pred             cCCCEEEEecCCCeEEEeecCccc----eeeeeecCCCC--CCCCccccccceeeeecccccceEEEEeec----CCCce
Q psy10867        129 ADSNFIVTGGEDGTICVWQLSRLI----CKQTVAFGIPG--SSGKGVTGLTEPLHVKSQHSLPVTHVTLSK----LGAKS  198 (343)
Q Consensus       129 ~~~~~l~s~~~dg~i~iwd~~~~~----~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~~~  198 (343)
                      ++...++.+..||.+.........    ......+....  ..-.+.....  ..........+..++++.    +.  .
T Consensus       156 ~~~~~l~v~~~dG~ll~l~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~--~  231 (547)
T PF11715_consen  156 DSEANLVVSLQDGGLLRLKRSSGDSDGSVWSEELFNDSSWLRSLSGLFPWS--YRGDNSSSSVAASLAVSSSEINDD--T  231 (547)
T ss_dssp             -SSSBEEEEESSS-EEEEEES----SSS-EE----STHHHHHCCTTTS-TT-----SSSS---EEEEEE-----ETT--T
T ss_pred             cCCCEEEEEECCCCeEEEECCcccCCCCeeEEEEeCCCchhhhhhCcCCcc--cccCCCCCCccceEEEecceeCCC--C
Confidence            367788888899998888876521    11111000000  0000000000  001111223445555555    33  6


Q ss_pred             EEEEeeCCCeEEEEecCCCceEEEee
Q psy10867        199 RVASVSHDRTCKIFDLCTGEDLLSLI  224 (343)
Q Consensus       199 ~l~~~~~d~~i~~wd~~~~~~~~~~~  224 (343)
                      ++++.+.|+++|+||+.+++++....
T Consensus       232 ~l~tl~~D~~LRiW~l~t~~~~~~~~  257 (547)
T PF11715_consen  232 FLFTLSRDHTLRIWSLETGQCLATID  257 (547)
T ss_dssp             EEEEEETTSEEEEEETTTTCEEEEEE
T ss_pred             EEEEEeCCCeEEEEECCCCeEEEEec
Confidence            89999999999999999999966653

The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.

>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast [])

Probab=91.98  E-value=2.6  Score=31.10  Aligned_cols=33  Identities=12%  Similarity=0.141  Sum_probs=26.7

Q ss_pred             cceEEEEeecCCC----ceEEEEeeCCCeEEEEecCC
Q psy10867        184 LPVTHVTLSKLGA----KSRVASVSHDRTCKIFDLCT  216 (343)
Q Consensus       184 ~~v~~~~~~~~~~----~~~l~~~~~d~~i~~wd~~~  216 (343)
                      ..+..++|+|.|-    +.+|++.+.++.|.+|....
T Consensus        86 ~~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~~~  122 (173)
T PF12657_consen   86 SQVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGPPG  122 (173)
T ss_pred             ccEEEEEECCCCCCCCCceEEEEEcCCCeEEEEecCC
Confidence            4789999999652    36899999999999998653

The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].

>TIGR01063 gyrA DNA gyrase, A subunit

Probab=91.85  E-value=12  Score=35.44  Aligned_cols=272  Identities=11%  Similarity=0.019  Sum_probs=131.5

Q ss_pred             EeCCceEEEEEcCCCeEEEEeCCCccc-------c--eecccCCcceEE-EEECCCCCEEEEecCCeEEEEEc---cCC-
Q psy10867         44 LLGNDYVLGVEKGKPMIQAWPVNSQEK-------A--QLRLICPGRISS-MQASPDAAYIAVSIETKLHMWQI---SSG-  109 (343)
Q Consensus        44 ~~~~~~~~~~~~~~~~i~iw~~~~~~~-------~--~~~~~~~~~v~~-~~~s~~~~~l~~~~d~~i~v~~~---~~~-  109 (343)
                      +-++...++.-+.+|.|+--...+...       .  ..+.. .+.+.. +..+....+++.+..|.+.....   ... 
T Consensus       492 li~~e~~~vllS~~GyIKri~~~~~~~~~~~~~g~s~~klKe-~D~l~~~~~~~t~d~LllfTs~Grv~~l~~~~IP~~~  570 (800)
T TIGR01063       492 LIARENVVVTLSHNGYVKRVPVSAYRLQKRGGKGVSGADMKD-DDFIEQLLVASTHDYLLFFTNRGKVYWLKVYQIPEAS  570 (800)
T ss_pred             ccCcceEEEEEcCCCEEEecchhhhhhhcccCcCccccccCC-CCeeEEEEEecCCCeEEEEeCCCcEEEEEhhhCcCCC
Confidence            345555566666668888776543221       1  01112 233333 33344455666677776555443   222 


Q ss_pred             -----ceE---EEecccCCCeEEEEEe--cCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeee
Q psy10867        110 -----RLL---ATASSHYQPITIVKWS--ADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVK  179 (343)
Q Consensus       110 -----~~~---~~~~~~~~~v~~~~~~--~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (343)
                           ..+   ..+.....-+.++...  .+...++..+.+|.++-.++.........               ......+
T Consensus       571 r~~~G~~i~~ll~L~~~E~Iv~~i~~~~~~~~~~lvliT~~GyiKRi~l~~~~~~~r~---------------G~~aikl  635 (800)
T TIGR01063       571 RTAKGKPIVNLLPLQPDERITAILSVKEFDDGLYLFFATKNGVVKKTSLTEFSNIRSN---------------GIIAIKL  635 (800)
T ss_pred             cCCCCcCHHHhccCCCCCeEEEEEEeccCCCCCEEEEEeCCCEEEEEEhHHhhhhccC---------------CcccccC
Confidence                 111   1222222334444432  24567888999999999887654321100               0001111


Q ss_pred             cccccceEEEEeecCCCceEEEEeeCCCeEEEEecCC---------CceEEEeecCCcEEEEEEcCCCCEEEEEcCCCcE
Q psy10867        180 SQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCT---------GEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVI  250 (343)
Q Consensus       180 ~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~---------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i  250 (343)
                      .. ...+..+......  ..++..+..|.+..+....         |.....+.....|.++..-.++..++..+..|.+
T Consensus       636 ke-~D~lv~v~~~~~~--d~lll~Ts~Gr~~r~~v~eIp~~gr~~~Gv~~i~L~~~E~Vv~~~~v~~~~~ll~vT~~G~~  712 (800)
T TIGR01063       636 DD-GDELISVRLTSGD--DEVMLGSKNGKAVRFPEEDVRPMGRAARGVRGIKLKNEDFVVSLLVVSEESYLLIVTENGYG  712 (800)
T ss_pred             CC-CCEEEEEEEeCCC--CEEEEEECCCcEEEEEhhhcCCcCCCCCCeecccCCCCCEEEEEEEeccccEEEEEecCCcE
Confidence            12 2334333333333  3466666677666554421         1122223334456665555556678888899999


Q ss_pred             EEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc-cCCceEEEEEc
Q psy10867        251 KSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVLGAFLG  329 (343)
Q Consensus       251 ~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~s  329 (343)
                      +...+.........  ..+.....+....+.+..+....+...++..+.+|.+..++...   +.... ....+..+...
T Consensus       713 Kr~~l~e~~~~~R~--~kGv~~ikl~~~~d~lv~~~~v~~~~~v~liT~~G~~lrf~~~e---I~~~gR~a~GVk~i~L~  787 (800)
T TIGR01063       713 KRTSIEEYRETSRG--GKGVKSIKITDRNGQVVGAIAVDDDDELMLITSAGKLIRTSVQD---VSEQGRNTQGVRLIRLD  787 (800)
T ss_pred             EEEEHHHccccCCC--CcceEEEEccCCCCeEEEEEEecCCCeEEEEecCCeEEEeeHhh---CCccccCCCCeeeeeeC
Confidence            98887654332110  00001111222223443433333444566667778777776542   22222 34456667775


Q ss_pred             cCCCeeeeccc
Q psy10867        330 LLPPAIHDYDF  340 (343)
Q Consensus       330 p~~~~l~~~~~  340 (343)
                      .+ ..++.+..
T Consensus       788 ~~-D~vv~~~~  797 (800)
T TIGR01063       788 ED-DKLVSVSK  797 (800)
T ss_pred             CC-CEEEEEEE
Confidence            44 34554443

This model describes the common type II DNA topoisomerase (DNA gyrase). Two apparently independently arising families, one in the Proteobacteria and one in Gram-positive lineages, are both designated toposisomerase IV.

>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]

Probab=91.68  E-value=4.6  Score=30.44  Aligned_cols=194  Identities=14%  Similarity=0.101  Sum_probs=102.0

Q ss_pred             EEEEEecCCCCcceEEEEeCCceEEEEEc--CCCeEEEEeCCCcccceecccCCcceEE--EEECCCCCEEEEecCCeEE
Q psy10867         27 LLMSYKGASVLSPHSMCLLGNDYVLGVEK--GKPMIQAWPVNSQEKAQLRLICPGRISS--MQASPDAAYIAVSIETKLH  102 (343)
Q Consensus        27 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~--~~~~i~iw~~~~~~~~~~~~~~~~~v~~--~~~s~~~~~l~~~~d~~i~  102 (343)
                      .++++......--..+.+. +|.++.+.+  ....|+.||+.+++.+....-....+..  +.-..|.-+..+=.++.-.
T Consensus        36 vi~~yphDs~sfTQGL~~~-~g~i~esTG~yg~S~ir~~~L~~gq~~~s~~l~~~~~FgEGit~~gd~~y~LTw~egvaf  114 (262)
T COG3823          36 VIRTYPHDSTSFTQGLEYL-DGHILESTGLYGFSKIRVSDLTTGQEIFSEKLAPDTVFGEGITKLGDYFYQLTWKEGVAF  114 (262)
T ss_pred             EEEeccCchhhhhcceeee-CCEEEEeccccccceeEEEeccCceEEEEeecCCccccccceeeccceEEEEEeccceeE
Confidence            3444444333112234443 345544432  2247999999998876433221112211  1111133344455788899


Q ss_pred             EEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeeccc
Q psy10867        103 MWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQH  182 (343)
Q Consensus       103 v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (343)
                      .+|.++-+++..+. ..+.=+.++.  |++.|+.+.....+..-|..+.....++.....+.          ++      
T Consensus       115 ~~d~~t~~~lg~~~-y~GeGWgLt~--d~~~LimsdGsatL~frdP~tfa~~~~v~VT~~g~----------pv------  175 (262)
T COG3823         115 KYDADTLEELGRFS-YEGEGWGLTS--DDKNLIMSDGSATLQFRDPKTFAELDTVQVTDDGV----------PV------  175 (262)
T ss_pred             EEChHHhhhhcccc-cCCcceeeec--CCcceEeeCCceEEEecCHHHhhhcceEEEEECCe----------ec------
Confidence            99998888776664 3344456554  55556666666678877877765544433111110          11      


Q ss_pred             ccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-------------cCCcEEEEEEcCCCCEEEEE
Q psy10867        183 SLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-------------LDTRLTCVAFDGTEDNIYMG  244 (343)
Q Consensus       183 ~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-------------~~~~i~~~~~~~~~~~l~~~  244 (343)
                       ..++.+.|-. |  .+.+-.-.+..|...|..+|+.+..+.             +..-.+.+++.|++..++..
T Consensus       176 -~~LNELE~Vd-G--~lyANVw~t~~I~rI~p~sGrV~~widlS~L~~~~~~~~~~~nvlNGIA~~~~~~r~~iT  246 (262)
T COG3823         176 -SKLNELEWVD-G--ELYANVWQTTRIARIDPDSGRVVAWIDLSGLLKELNLDKSNDNVLNGIAHDPQQDRFLIT  246 (262)
T ss_pred             -ccccceeeec-c--EEEEeeeeecceEEEcCCCCcEEEEEEccCCchhcCccccccccccceeecCcCCeEEEe
Confidence             1222333322 2  344444445556666667776665543             12346789999988555443

>PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I []

Probab=91.65  E-value=12  Score=35.24  Aligned_cols=168  Identities=14%  Similarity=0.098  Sum_probs=97.1

Q ss_pred             cCCcceEEEEEC---C----CCCEEEEecCCeEEEEEcc------CC---------ceEEEecc---cCCCeEEEEEec-
Q psy10867         76 ICPGRISSMQAS---P----DAAYIAVSIETKLHMWQIS------SG---------RLLATASS---HYQPITIVKWSA-  129 (343)
Q Consensus        76 ~~~~~v~~~~~s---~----~~~~l~~~~d~~i~v~~~~------~~---------~~~~~~~~---~~~~v~~~~~~~-  129 (343)
                      ....+|..+.|.   .    ..++|++=....+.|+...      ..         .++..+..   ...+...++|+| 
T Consensus        77 ~~~~PI~qI~fa~~~~~~~~~~~~l~Vrt~~st~I~~p~~~~~~~~~~~~~s~i~~~~l~~i~~~~tgg~~~aDv~FnP~  156 (765)
T PF10214_consen   77 DDGSPIKQIKFATLSESFDEKSRWLAVRTETSTTILRPEYHRVISSIRSRPSRIDPNPLLTISSSDTGGFPHADVAFNPW  156 (765)
T ss_pred             CCCCCeeEEEecccccccCCcCcEEEEEcCCEEEEEEcccccccccccCCccccccceeEEechhhcCCCccceEEeccC
Confidence            456789999998   2    2358888777778888721      11         22333331   224677899999 


Q ss_pred             CCCEEEEecCCCeEEEeecCccceee--eeecCCCCCCCCcccccccee-eeecccccceEEEEeecCCCceEEEEeeCC
Q psy10867        130 DSNFIVTGGEDGTICVWQLSRLICKQ--TVAFGIPGSSGKGVTGLTEPL-HVKSQHSLPVTHVTLSKLGAKSRVASVSHD  206 (343)
Q Consensus       130 ~~~~l~s~~~dg~i~iwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d  206 (343)
                      +...||.....|.-.||++.......  .+...... .+        .+ ... .....-..+.|.++.  ..|+..+ .
T Consensus       157 ~~~q~AiVD~~G~Wsvw~i~~~~~~~~~~~~~~~~~-~g--------si~~d~-~e~s~w~rI~W~~~~--~~lLv~~-r  223 (765)
T PF10214_consen  157 DQRQFAIVDEKGNWSVWDIKGRPKRKSSNLRLSRNI-SG--------SIIFDP-EELSNWKRILWVSDS--NRLLVCN-R  223 (765)
T ss_pred             ccceEEEEeccCcEEEEEeccccccCCcceeeccCC-Cc--------cccCCC-cccCcceeeEecCCC--CEEEEEc-C
Confidence            56699999999999999992221111  11000000 00        00 000 011334577887776  4555544 4


Q ss_pred             CeEEEEecCCCceEE---EeecCCcEEEEEEcCCC-CEEEEEcCCCcEEEEEeec
Q psy10867        207 RTCKIFDLCTGEDLL---SLILDTRLTCVAFDGTE-DNIYMGTSEGVIKSFCLRQ  257 (343)
Q Consensus       207 ~~i~~wd~~~~~~~~---~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~  257 (343)
                      ..+.++|+++.....   .......|..+.-+|.. .+++.- ....|...++..
T Consensus       224 ~~l~~~d~~~~~~~~~l~~~~~~~~IlDv~~~~~~~~~~FiL-Ts~eiiw~~~~~  277 (765)
T PF10214_consen  224 SKLMLIDFESNWQTEYLVTAKTWSWILDVKRSPDNPSHVFIL-TSKEIIWLDVKS  277 (765)
T ss_pred             CceEEEECCCCCccchhccCCChhheeeEEecCCccceEEEE-ecCeEEEEEccC
Confidence            568899998776533   22245668888888873 233333 236677777766

These proteins are found in fungi.

>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4

Probab=91.55  E-value=1.6  Score=27.87  Aligned_cols=42  Identities=7%  Similarity=-0.087  Sum_probs=30.4

Q ss_pred             eCCCcEEEEecccceeeeecccCCceEEEEEccCCCeeeecc
Q psy10867        298 SADETLKIWHTISRQCLRTIQHKGPVLGAFLGLLPPAIHDYD  339 (343)
Q Consensus       298 ~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~  339 (343)
                      ..+|.+.-||..+++....+..-...+.++++||+.+|+.+-
T Consensus        34 ~~~GRll~ydp~t~~~~vl~~~L~fpNGVals~d~~~vlv~E   75 (89)
T PF03088_consen   34 RPTGRLLRYDPSTKETTVLLDGLYFPNGVALSPDESFVLVAE   75 (89)
T ss_dssp             ---EEEEEEETTTTEEEEEEEEESSEEEEEE-TTSSEEEEEE
T ss_pred             CCCcCEEEEECCCCeEEEehhCCCccCeEEEcCCCCEEEEEe
Confidence            346889999998887655555555789999999999888763

3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.

>PF08801 Nucleoporin_N: Nup133 N terminal like; InterPro: IPR014908 Nucleoporins are the main components of the nuclear pore complex (NPC) in eukaryotic cells, and mediate bidirectional nucleocytoplasmic transport, especially of mRNA and proteins

Probab=91.40  E-value=8.7  Score=33.16  Aligned_cols=31  Identities=10%  Similarity=0.322  Sum_probs=25.2

Q ss_pred             CcEEEEEEccCCCEEEEEeCCCcEEEEeccc
Q psy10867        280 KQVTSLSCSITGITLLSSSADETLKIWHTIS  310 (343)
Q Consensus       280 ~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~  310 (343)
                      ..|.+++..+..+.+++.+.+|.|.+|++..
T Consensus       190 ~~I~~v~~d~~r~~ly~l~~~~~Iq~w~l~~  220 (422)
T PF08801_consen  190 PKIVQVAVDPSRRLLYTLTSDGSIQVWDLGP  220 (422)
T ss_dssp             --EEEEEEETTTTEEEEEESSE-EEEEEE-S
T ss_pred             hceeeEEecCCcCEEEEEeCCCcEEEEEEeC
Confidence            4489999999889999999999999999974

RNA undergoing nuclear export first encounters the basket of the nuclear pore and many nucleoporins are accessible on the basket side of the pore [, ]. This entry represents the N-terminal of Nucleoprotein which forms a seven-bladed beta propeller structure []. ; PDB: 1XKS_A.

>PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes

Probab=91.38  E-value=4  Score=31.90  Aligned_cols=145  Identities=13%  Similarity=0.072  Sum_probs=75.6

Q ss_pred             eEEEEeCCCcccceecccCCcceEEEEECCCCCEEEEec--C--CeEEEEEccC---C-ceEE---EecccCCCeEEEEE
Q psy10867         59 MIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSI--E--TKLHMWQISS---G-RLLA---TASSHYQPITIVKW  127 (343)
Q Consensus        59 ~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--d--~~i~v~~~~~---~-~~~~---~~~~~~~~v~~~~~  127 (343)
                      .-.+||+.+++..........-...-.+.+||++|.+|.  +  ..+++++..+   . ....   .+. ....-....-
T Consensus        47 ~s~~yD~~tn~~rpl~v~td~FCSgg~~L~dG~ll~tGG~~~G~~~ir~~~p~~~~~~~~w~e~~~~m~-~~RWYpT~~~  125 (243)
T PF07250_consen   47 HSVEYDPNTNTFRPLTVQTDTFCSGGAFLPDGRLLQTGGDNDGNKAIRIFTPCTSDGTCDWTESPNDMQ-SGRWYPTATT  125 (243)
T ss_pred             EEEEEecCCCcEEeccCCCCCcccCcCCCCCCCEEEeCCCCccccceEEEecCCCCCCCCceECccccc-CCCccccceE
Confidence            456899988775533333333344456789999999853  2  3688888654   1 1111   111 1122234455


Q ss_pred             ecCCCEEEEecCCCe-EEEeecCccc-eeeeeecCCCCCCCCccccccceeeeec--ccccceEEEEeecCCCceEEEEe
Q psy10867        128 SADSNFIVTGGEDGT-ICVWQLSRLI-CKQTVAFGIPGSSGKGVTGLTEPLHVKS--QHSLPVTHVTLSKLGAKSRVASV  203 (343)
Q Consensus       128 ~~~~~~l~s~~~dg~-i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~l~~~  203 (343)
                      .|||+.|+.|+.... ..+|.-.... ....+.                .+....  ....-=-.+...|+|  ++++.+
T Consensus       126 L~DG~vlIvGG~~~~t~E~~P~~~~~~~~~~~~----------------~l~~~~~~~~~nlYP~~~llPdG--~lFi~a  187 (243)
T PF07250_consen  126 LPDGRVLIVGGSNNPTYEFWPPKGPGPGPVTLP----------------FLSQTSDTLPNNLYPFVHLLPDG--NLFIFA  187 (243)
T ss_pred             CCCCCEEEEeCcCCCcccccCCccCCCCceeee----------------cchhhhccCccccCceEEEcCCC--CEEEEE
Confidence            679999999887632 3333321110 000000                000000  011111246677888  777777


Q ss_pred             eCCCeEEEEecCCCceEEEee
Q psy10867        204 SHDRTCKIFDLCTGEDLLSLI  224 (343)
Q Consensus       204 ~~d~~i~~wd~~~~~~~~~~~  224 (343)
                      ..+.  .+||..+.+.++.+.
T Consensus       188 n~~s--~i~d~~~n~v~~~lP  206 (243)
T PF07250_consen  188 NRGS--IIYDYKTNTVVRTLP  206 (243)
T ss_pred             cCCc--EEEeCCCCeEEeeCC
Confidence            6554  566887776666554

Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium [].

>PF02333 Phytase: Phytase; InterPro: IPR003431 Phytase (3

Probab=91.14  E-value=8.3  Score=32.41  Aligned_cols=192  Identities=13%  Similarity=0.113  Sum_probs=106.6

Q ss_pred             ccceEEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeC----Cc---eEEEEEcCC---CeEEEEeCCC--ccc
Q psy10867          3 LLNEVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLG----ND---YVLGVEKGK---PMIQAWPVNS--QEK   70 (343)
Q Consensus         3 ~v~~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~----~~---~~~~~~~~~---~~i~iw~~~~--~~~   70 (343)
                      |-.++++..+.++-+.+||+ .|+.++.+...   .++.+..-.    +|   .+++++..+   ..|++|.+..  +..
T Consensus        66 p~kSlIigTdK~~GL~VYdL-~Gk~lq~~~~G---r~NNVDvrygf~l~g~~vDlavas~R~~g~n~l~~f~id~~~g~L  141 (381)
T PF02333_consen   66 PAKSLIIGTDKKGGLYVYDL-DGKELQSLPVG---RPNNVDVRYGFPLNGKTVDLAVASDRSDGRNSLRLFRIDPDTGEL  141 (381)
T ss_dssp             GGG-EEEEEETTTEEEEEET-TS-EEEEE-SS----EEEEEEEEEEEETTEEEEEEEEEE-CCCT-EEEEEEEETTTTEE
T ss_pred             cccceEEEEeCCCCEEEEcC-CCcEEEeecCC---CcceeeeecceecCCceEEEEEEecCcCCCCeEEEEEecCCCCcc
Confidence            45678888888999999998 67777777532   334333321    22   234444432   4799997753  322


Q ss_pred             ceec------ccCCcceEEEEE--CC-CCCEEE--EecCCeEEEEEcc---CC----ceEEEecccCCCeEEEEEecCCC
Q psy10867         71 AQLR------LICPGRISSMQA--SP-DAAYIA--VSIETKLHMWQIS---SG----RLLATASSHYQPITIVKWSADSN  132 (343)
Q Consensus        71 ~~~~------~~~~~~v~~~~~--s~-~~~~l~--~~~d~~i~v~~~~---~~----~~~~~~~~~~~~v~~~~~~~~~~  132 (343)
                      ....      ......+..+++  +| +|.+.+  ...+|.+.-|.+.   .+    ++++.+.. ...+..|.......
T Consensus       142 ~~v~~~~~p~~~~~~e~yGlcly~~~~~g~~ya~v~~k~G~~~Qy~L~~~~~g~v~~~lVR~f~~-~sQ~EGCVVDDe~g  220 (381)
T PF02333_consen  142 TDVTDPAAPIATDLSEPYGLCLYRSPSTGALYAFVNGKDGRVEQYELTDDGDGKVSATLVREFKV-GSQPEGCVVDDETG  220 (381)
T ss_dssp             EE-CBTTC-EE-SSSSEEEEEEEE-TTT--EEEEEEETTSEEEEEEEEE-TTSSEEEEEEEEEE--SS-EEEEEEETTTT
T ss_pred             eEcCCCCcccccccccceeeEEeecCCCCcEEEEEecCCceEEEEEEEeCCCCcEeeEEEEEecC-CCcceEEEEecccC
Confidence            2111      011234666665  44 465544  3678988888774   23    34666654 34688888888888


Q ss_pred             EEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeee--cccccceEEEEeec--CCCceEEEEeeCCCe
Q psy10867        133 FIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVK--SQHSLPVTHVTLSK--LGAKSRVASVSHDRT  208 (343)
Q Consensus       133 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~--~~~~~~l~~~~~d~~  208 (343)
                      .|+.+-++.-|.-|+.+.......                 ..+...  ......|..+++..  ++.+.+|++.-.+++
T Consensus       221 ~LYvgEE~~GIW~y~Aep~~~~~~-----------------~~v~~~~g~~l~aDvEGlaly~~~~g~gYLivSsQG~~s  283 (381)
T PF02333_consen  221 RLYVGEEDVGIWRYDAEPEGGNDR-----------------TLVASADGDGLVADVEGLALYYGSDGKGYLIVSSQGDNS  283 (381)
T ss_dssp             EEEEEETTTEEEEEESSCCC-S-------------------EEEEEBSSSSB-S-EEEEEEEE-CCC-EEEEEEEGGGTE
T ss_pred             CEEEecCccEEEEEecCCCCCCcc-----------------eeeecccccccccCccceEEEecCCCCeEEEEEcCCCCe
Confidence            999999988777777653321100                 011111  12446788888764  343345555555789


Q ss_pred             EEEEecCC
Q psy10867        209 CKIFDLCT  216 (343)
Q Consensus       209 i~~wd~~~  216 (343)
                      ..+|+.+.
T Consensus       284 f~Vy~r~~  291 (381)
T PF02333_consen  284 FAVYDREG  291 (381)
T ss_dssp             EEEEESST
T ss_pred             EEEEecCC
Confidence            99999764

1.3.8 from EC) (phytate 3-phosphatase) is a secreted enzyme which hydrolyses phytate to release inorganic phosphate. This family appears to represent a novel enzyme that shows phytase activity () and has been shown to consist of a single structural unit with a six-bladed propeller folding architecture ().; GO: 0016158 3-phytase activity; PDB: 3AMS_A 3AMR_A 1QLG_A 2POO_A 1H6L_A 1CVM_A 1POO_A.

>COG5276 Uncharacterized conserved protein [Function unknown]

Probab=91.10  E-value=6.8  Score=31.32  Aligned_cols=155  Identities=11%  Similarity=0.004  Sum_probs=91.4

Q ss_pred             CCcceEEEEECCCCCEEEEecCCeEEEEEccCCceEEEecc--cCCCeEEEEEecCCCEEEEecCCCeEEEeecCcccee
Q psy10867         77 CPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASS--HYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICK  154 (343)
Q Consensus        77 ~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~  154 (343)
                      ..+-+..+.++.+--++ +-.+..+++.|+.+......+..  -.+--.++..  .|++...+..|.-..+.|+.+....
T Consensus        85 ~~~l~~Dv~vse~yvyv-ad~ssGL~IvDIS~P~sP~~~~~lnt~gyaygv~v--sGn~aYVadlddgfLivdvsdpssP  161 (370)
T COG5276          85 ARDLFADVRVSEEYVYV-ADWSSGLRIVDISTPDSPTLIGFLNTDGYAYGVYV--SGNYAYVADLDDGFLIVDVSDPSSP  161 (370)
T ss_pred             hhhhhheeEecccEEEE-EcCCCceEEEeccCCCCcceeccccCCceEEEEEe--cCCEEEEeeccCcEEEEECCCCCCc
Confidence            34556777777433222 34566799999987643322221  1133344444  5888888886667788888775332


Q ss_pred             eeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCce---EEEeecCCcEEE
Q psy10867        155 QTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGED---LLSLILDTRLTC  231 (343)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~---~~~~~~~~~i~~  231 (343)
                      .                   ...........-..++.+-    ++...+..|+-+.+.|+.....   +........+.+
T Consensus       162 ~-------------------lagrya~~~~d~~~v~ISG----n~AYvA~~d~GL~ivDVSnp~sPvli~~~n~g~g~~s  218 (370)
T COG5276         162 Q-------------------LAGRYALPGGDTHDVAISG----NYAYVAWRDGGLTIVDVSNPHSPVLIGSYNTGPGTYS  218 (370)
T ss_pred             e-------------------eeeeeccCCCCceeEEEec----CeEEEEEeCCCeEEEEccCCCCCeEEEEEecCCceEE
Confidence            1                   1222222333335566654    4666777899999999976544   333344557888


Q ss_pred             EEEcCCCCEEEEEcCCCcEEEEEeeccc
Q psy10867        232 VAFDGTEDNIYMGTSEGVIKSFCLRQVP  259 (343)
Q Consensus       232 ~~~~~~~~~l~~~~~d~~i~i~d~~~~~  259 (343)
                      +..+++-.+++...  .-+.+-|.....
T Consensus       219 v~vsdnr~y~vvy~--egvlivd~s~~s  244 (370)
T COG5276         219 VSVSDNRAYLVVYD--EGVLIVDVSGPS  244 (370)
T ss_pred             EEecCCeeEEEEcc--cceEEEecCCCC
Confidence            88888766666543  335555555443

>COG1520 FOG: WD40-like repeat [Function unknown]

Probab=91.08  E-value=8.6  Score=32.49  Aligned_cols=196  Identities=17%  Similarity=0.076  Sum_probs=107.5

Q ss_pred             EeCCceEEEEEcCCCeEEEEeCCCcccceecccC--CcceEEEEECCCCCEEEEecCCeEEEEEccCCceEEEecccCC-
Q psy10867         44 LLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLIC--PGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQ-  120 (343)
Q Consensus        44 ~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~~~~~-  120 (343)
                      ...++++++...+ |.|.-.|.+++..+......  ...+..-.+..+|++++++.++.++.+|..+|+.+........ 
T Consensus        65 ~~~dg~v~~~~~~-G~i~A~d~~~g~~~W~~~~~~~~~~~~~~~~~~~G~i~~g~~~g~~y~ld~~~G~~~W~~~~~~~~  143 (370)
T COG1520          65 ADGDGTVYVGTRD-GNIFALNPDTGLVKWSYPLLGAVAQLSGPILGSDGKIYVGSWDGKLYALDASTGTLVWSRNVGGSP  143 (370)
T ss_pred             EeeCCeEEEecCC-CcEEEEeCCCCcEEecccCcCcceeccCceEEeCCeEEEecccceEEEEECCCCcEEEEEecCCCe
Confidence            3446777666444 88888888888755222111  1233333333389988888899999999888998877765541 


Q ss_pred             CeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEE
Q psy10867        121 PITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRV  200 (343)
Q Consensus       121 ~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l  200 (343)
                      .+..-....++ .+..++.++.+.-.+..++...........              ........++     ..++   .+
T Consensus       144 ~~~~~~v~~~~-~v~~~s~~g~~~al~~~tG~~~W~~~~~~~--------------~~~~~~~~~~-----~~~~---~v  200 (370)
T COG1520         144 YYASPPVVGDG-TVYVGTDDGHLYALNADTGTLKWTYETPAP--------------LSLSIYGSPA-----IASG---TV  200 (370)
T ss_pred             EEecCcEEcCc-EEEEecCCCeEEEEEccCCcEEEEEecCCc--------------cccccccCce-----eecc---eE
Confidence            11111222233 344444778888888888877665432110              0111111221     2222   44


Q ss_pred             EEeeC--CCeEEEEecCCCceEEEeecCCcEEE-----E-EEcC----CCCEEEEEcCCCcEEEEEeeccccccc
Q psy10867        201 ASVSH--DRTCKIFDLCTGEDLLSLILDTRLTC-----V-AFDG----TEDNIYMGTSEGVIKSFCLRQVPRTRD  263 (343)
Q Consensus       201 ~~~~~--d~~i~~wd~~~~~~~~~~~~~~~i~~-----~-~~~~----~~~~l~~~~~d~~i~i~d~~~~~~~~~  263 (343)
                      +.+..  ++.+.-.|..+|+..........+..     . .+..    .+..++.++.++.+...|....+....
T Consensus       201 y~~~~~~~~~~~a~~~~~G~~~w~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~~~l~~~~G~~~W~  275 (370)
T COG1520         201 YVGSDGYDGILYALNAEDGTLKWSQKVSQTIGRTAISTTPAVDGGPVYVDGGVYAGSYGGKLLCLDADTGELIWS  275 (370)
T ss_pred             EEecCCCcceEEEEEccCCcEeeeeeeecccCcccccccccccCceEEECCcEEEEecCCeEEEEEcCCCceEEE
Confidence            44544  66777788888888776532111111     1 1110    122235566677777777776655443

>smart00036 CNH Domain found in NIK1-like kinases, mouse citron and yeast ROM1, ROM2

Probab=91.07  E-value=7.5  Score=31.77  Aligned_cols=58  Identities=12%  Similarity=0.120  Sum_probs=38.2

Q ss_pred             CceEEEEEcCCCeEEEEeCCCc--ccceecccCCcceEEEEECCCCCEEEE--ecCCeEEEEEcc
Q psy10867         47 NDYVLGVEKGKPMIQAWPVNSQ--EKAQLRLICPGRISSMQASPDAAYIAV--SIETKLHMWQIS  107 (343)
Q Consensus        47 ~~~~~~~~~~~~~i~iw~~~~~--~~~~~~~~~~~~v~~~~~s~~~~~l~~--~~d~~i~v~~~~  107 (343)
                      +++++..|.++|. .+.+....  +..+.  .+..+|+++...+.-+.|++  +....++++++.
T Consensus        12 ~~~~lL~GTe~Gl-y~~~~~~~~~~~~kl--~~~~~v~q~~v~~~~~lLi~Lsgk~~~L~~~~L~   73 (302)
T smart00036       12 DGKWLLVGTEEGL-YVLNISDQPGTLEKL--IGRRSVTQIWVLEENNVLLMISGKKPQLYSHPLS   73 (302)
T ss_pred             CCcEEEEEeCCce-EEEEcccCCCCeEEe--cCcCceEEEEEEhhhCEEEEEeCCcceEEEEEHH
Confidence            3357777777664 44455542  22232  45668999999998887776  344459999984

Unpublished observations.

>PF08801 Nucleoporin_N: Nup133 N terminal like; InterPro: IPR014908 Nucleoporins are the main components of the nuclear pore complex (NPC) in eukaryotic cells, and mediate bidirectional nucleocytoplasmic transport, especially of mRNA and proteins

Probab=91.00  E-value=9.6  Score=32.91  Aligned_cols=32  Identities=16%  Similarity=0.330  Sum_probs=25.1

Q ss_pred             cceEEEEeecCCCceEEEEeeCCCeEEEEecCCC
Q psy10867        184 LPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTG  217 (343)
Q Consensus       184 ~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~  217 (343)
                      ..|..++..+..  +.+++.+.+|.|.+|++..+
T Consensus       190 ~~I~~v~~d~~r--~~ly~l~~~~~Iq~w~l~~~  221 (422)
T PF08801_consen  190 PKIVQVAVDPSR--RLLYTLTSDGSIQVWDLGPG  221 (422)
T ss_dssp             --EEEEEEETTT--TEEEEEESSE-EEEEEE-SS
T ss_pred             hceeeEEecCCc--CEEEEEeCCCcEEEEEEeCC
Confidence            448899998887  79999999999999999753

RNA undergoing nuclear export first encounters the basket of the nuclear pore and many nucleoporins are accessible on the basket side of the pore [, ]. This entry represents the N-terminal of Nucleoprotein which forms a seven-bladed beta propeller structure []. ; PDB: 1XKS_A.

>COG5276 Uncharacterized conserved protein [Function unknown]

Probab=90.94  E-value=7  Score=31.23  Aligned_cols=192  Identities=11%  Similarity=0.073  Sum_probs=111.3

Q ss_pred             cceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecc--cCCcceEEEEECCCCCEEEEe-cCCeEEEEEccCCc---e
Q psy10867         38 SPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRL--ICPGRISSMQASPDAAYIAVS-IETKLHMWQISSGR---L  111 (343)
Q Consensus        38 ~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~-~d~~i~v~~~~~~~---~  111 (343)
                      .+..+.++.+--++  +..+.-++|.|+.+........  ...+--.++..  .|+++..+ .+..+.+.|+.+.+   +
T Consensus        88 l~~Dv~vse~yvyv--ad~ssGL~IvDIS~P~sP~~~~~lnt~gyaygv~v--sGn~aYVadlddgfLivdvsdpssP~l  163 (370)
T COG5276          88 LFADVRVSEEYVYV--ADWSSGLRIVDISTPDSPTLIGFLNTDGYAYGVYV--SGNYAYVADLDDGFLIVDVSDPSSPQL  163 (370)
T ss_pred             hhheeEecccEEEE--EcCCCceEEEeccCCCCcceeccccCCceEEEEEe--cCCEEEEeeccCcEEEEECCCCCCcee
Confidence            55667776544444  4444579999998765443222  11233344444  47777764 46667788876543   3


Q ss_pred             EEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeec-ccccceEEEE
Q psy10867        112 LATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKS-QHSLPVTHVT  190 (343)
Q Consensus       112 ~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~  190 (343)
                      ..++......-..++.+  |++-..+..|+-+.+-|+.....                     +...-. .-...+.++.
T Consensus       164 agrya~~~~d~~~v~IS--Gn~AYvA~~d~GL~ivDVSnp~s---------------------Pvli~~~n~g~g~~sv~  220 (370)
T COG5276         164 AGRYALPGGDTHDVAIS--GNYAYVAWRDGGLTIVDVSNPHS---------------------PVLIGSYNTGPGTYSVS  220 (370)
T ss_pred             eeeeccCCCCceeEEEe--cCeEEEEEeCCCeEEEEccCCCC---------------------CeEEEEEecCCceEEEE
Confidence            34444444445667775  66777777889999999987532                     211111 1223677777


Q ss_pred             eecCCCceEEEEeeCCCeEEEEecCCCceEEEee--cCCcEEEE-EEcCCCCEEEEEcCCCcEEEEEeecccc
Q psy10867        191 LSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI--LDTRLTCV-AFDGTEDNIYMGTSEGVIKSFCLRQVPR  260 (343)
Q Consensus       191 ~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~--~~~~i~~~-~~~~~~~~l~~~~~d~~i~i~d~~~~~~  260 (343)
                      .+++-  .+++.  .+--+.+-|....+....+.  ....+.++ .+.-.+++.+....+.-+.+-|..+...
T Consensus       221 vsdnr--~y~vv--y~egvlivd~s~~ssp~~~gsyet~~p~~~s~v~Vs~~~~Yvadga~gl~~idisnp~s  289 (370)
T COG5276         221 VSDNR--AYLVV--YDEGVLIVDVSGPSSPTVFGSYETSNPVSISTVPVSGEYAYVADGAKGLPIIDISNPPS  289 (370)
T ss_pred             ecCCe--eEEEE--cccceEEEecCCCCCceEeeccccCCcccccceecccceeeeeccccCceeEeccCCCC
Confidence            77764  34433  33446667776666444443  22222222 3333477888877777788888876544

>KOG4460|consensus

Probab=90.82  E-value=5.3  Score=34.61  Aligned_cols=97  Identities=14%  Similarity=0.150  Sum_probs=52.5

Q ss_pred             CeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCC--Cce
Q psy10867        121 PITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLG--AKS  198 (343)
Q Consensus       121 ~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~  198 (343)
                      .|..+..++.|..++-.+.+|.+..+=.+.-.....+..+.+... ....+..+.+... ...-.+..++|+|+.  + .
T Consensus       105 eV~~vl~s~~GS~VaL~G~~Gi~vMeLp~rwG~~s~~eDgk~~v~-CRt~~i~~~~fts-s~~ltl~Qa~WHP~S~~D-~  181 (741)
T KOG4460|consen  105 EVYQVLLSPTGSHVALIGIKGLMVMELPKRWGKNSEFEDGKSTVN-CRTTPVAERFFTS-STSLTLKQAAWHPSSILD-P  181 (741)
T ss_pred             EEEEEEecCCCceEEEecCCeeEEEEchhhcCccceecCCCceEE-EEeecccceeecc-CCceeeeeccccCCccCC-c
Confidence            467778889999998888888655433221111111100000000 0000111111111 133456678899986  4 5


Q ss_pred             EEEEeeCCCeEEEEecCCCceE
Q psy10867        199 RVASVSHDRTCKIFDLCTGEDL  220 (343)
Q Consensus       199 ~l~~~~~d~~i~~wd~~~~~~~  220 (343)
                      .+..-+.|..+|+||+...+.+
T Consensus       182 hL~iL~sdnviRiy~lS~~tel  203 (741)
T KOG4460|consen  182 HLVLLTSDNVIRIYSLSEPTEL  203 (741)
T ss_pred             eEEEEecCcEEEEEecCCcchh
Confidence            6777888999999999765544

>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family

Probab=90.76  E-value=10  Score=32.86  Aligned_cols=107  Identities=14%  Similarity=0.127  Sum_probs=63.8

Q ss_pred             EecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccc--e----ecc-cCCcceEEEEECCCC------CEEEEe-
Q psy10867         31 YKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKA--Q----LRL-ICPGRISSMQASPDA------AYIAVS-   96 (343)
Q Consensus        31 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~--~----~~~-~~~~~v~~~~~s~~~------~~l~~~-   96 (343)
                      +...-. ..+.|+|.||++++++-...|.|++++..++...  .    ... ...+....|+++|+-      .+|..+ 
T Consensus        25 va~GL~-~Pw~maflPDG~llVtER~~G~I~~v~~~~~~~~~~~~l~~v~~~~ge~GLlglal~PdF~~~~~n~~lYvsy  103 (454)
T TIGR03606        25 LLSGLN-KPWALLWGPDNQLWVTERATGKILRVNPETGEVKVVFTLPEIVNDAQHNGLLGLALHPDFMQEKGNPYVYISY  103 (454)
T ss_pred             EECCCC-CceEEEEcCCCeEEEEEecCCEEEEEeCCCCceeeeecCCceeccCCCCceeeEEECCCccccCCCcEEEEEE
Confidence            333334 7899999999999988874599999986554321  1    111 135678999999874      233322 


Q ss_pred             -c---------CCeEEEEEccCC--c---eEEEec------ccCCCeEEEEEecCCCEEEEecCC
Q psy10867         97 -I---------ETKLHMWQISSG--R---LLATAS------SHYQPITIVKWSADSNFIVTGGED  140 (343)
Q Consensus        97 -~---------d~~i~v~~~~~~--~---~~~~~~------~~~~~v~~~~~~~~~~~l~s~~~d  140 (343)
                       .         ...|.-|.+...  .   ....+.      .|.  -..|.|.||+.+.++.+..
T Consensus       104 t~~~~~~~~~~~~~I~R~~l~~~~~~l~~~~~Il~~lP~~~~H~--GgrI~FgPDG~LYVs~GD~  166 (454)
T TIGR03606       104 TYKNGDKELPNHTKIVRYTYDKSTQTLEKPVDLLAGLPAGNDHN--GGRLVFGPDGKIYYTIGEQ  166 (454)
T ss_pred             eccCCCCCccCCcEEEEEEecCCCCccccceEEEecCCCCCCcC--CceEEECCCCcEEEEECCC
Confidence             1         234555555321  1   111121      233  3568899999877766654

PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.

>COG5308 NUP170 Nuclear pore complex subunit [Intracellular trafficking and secretion]

Probab=90.61  E-value=15  Score=34.42  Aligned_cols=196  Identities=13%  Similarity=0.140  Sum_probs=96.4

Q ss_pred             CCeEEEEeCCCcccceecccCCcceEEEEE-CCCC--------CEEEEecCCeEEEEEcc----CCceEEEe------cc
Q psy10867         57 KPMIQAWPVNSQEKAQLRLICPGRISSMQA-SPDA--------AYIAVSIETKLHMWQIS----SGRLLATA------SS  117 (343)
Q Consensus        57 ~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~-s~~~--------~~l~~~~d~~i~v~~~~----~~~~~~~~------~~  117 (343)
                      |+.+.+|+..++...+........|..+.. -|..        ++|+.+....+.++-+.    +++. ..+      ..
T Consensus       101 dnkLiLWnynn~neyq~idd~shtIlkVkLvrPkantFvs~i~hlL~vAT~~e~~ilgvs~d~~T~El-s~fnTgl~vsv  179 (1263)
T COG5308         101 DNKLILWNYNNSNEYQEIDDFSHTILKVKLVRPKANTFVSRISHLLFVATEKEVMILGVSKDTKTGEL-SLFNTGLVVSV  179 (1263)
T ss_pred             CCEEEEEecCCCcchhhhhhhhhheeEEEEeccCCcccHHhhhhhhhhhhhheeeEEEEEecccccee-EEEecceEEec
Confidence            478999999977655444433334444433 2221        23333334444444332    2222 111      11


Q ss_pred             cCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeee--cCCCCCCCCccccccceeeeecccccceEEEEeecCC
Q psy10867        118 HYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVA--FGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLG  195 (343)
Q Consensus       118 ~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  195 (343)
                      ..-.|.|+.-+.+|+.+++|..|  +.+|.+.-.....-+.  ...-..........-.......-|...|..+++....
T Consensus       180 qGinV~civs~e~GrIFf~g~~d--~nvyEl~Y~~sd~wfnskcskiclTkS~l~sllPs~~~~~ipgetI~Ql~vDqsR  257 (1263)
T COG5308         180 QGINVRCIVSEEDGRIFFGGEND--PNVYELVYKSSDSWFNSKCSKICLTKSILSSLLPSFFSFGIPGETIKQLAVDQSR  257 (1263)
T ss_pred             cCceeEEEEeccCCcEEEecCCC--CCeEEEEEeccchhhhhhhhccCCcHHHHHhhcccccccCCcccchhheeecccc
Confidence            23458888888889999888877  7778764321110000  0000000000001111112222355667777776654


Q ss_pred             CceEEEEeeCCCeEEEEecCCCceEE--------------------------------Ee--e--cCCcEEEEEEcCCCC
Q psy10867        196 AKSRVASVSHDRTCKIFDLCTGEDLL--------------------------------SL--I--LDTRLTCVAFDGTED  239 (343)
Q Consensus       196 ~~~~l~~~~~d~~i~~wd~~~~~~~~--------------------------------~~--~--~~~~i~~~~~~~~~~  239 (343)
                        .++.+-+....|+-|.+.......                                ..  .  ....+.+++....|-
T Consensus       258 --g~ly~Lr~kS~Vray~itkngl~gpv~i~~a~i~r~a~~lna~sPlL~pr~~kIvkIvsi~~~Enn~lflvaiT~tgc  335 (1263)
T COG5308         258 --GLLYVLRKKSAVRAYSITKNGLVGPVFISFASIDRNAAILNATSPLLEPRMYKIVKIVSIPAYENNQLFLVAITSTGC  335 (1263)
T ss_pred             --cceeeecccceeeeEeeecccccccccccHHHHHhHHhhhccCCcccCCceEEEEEEeecccccccceEEEEEeccce
Confidence              566666666777777654321111                                00  0  123455556666666


Q ss_pred             EEEEEcCCCcEEEEEeec
Q psy10867        240 NIYMGTSEGVIKSFCLRQ  257 (343)
Q Consensus       240 ~l~~~~~d~~i~i~d~~~  257 (343)
                      .++.-+.-|.+.+.+++.
T Consensus       336 RlYf~Gs~gr~si~alkl  353 (1263)
T COG5308         336 RLYFDGSRGRVSIVALKL  353 (1263)
T ss_pred             EEEEecCccceeeecccc
Confidence            666666667777776654

>PF14269 Arylsulfotran_2: Arylsulfotransferase (ASST)

Probab=90.51  E-value=8.4  Score=31.40  Aligned_cols=135  Identities=15%  Similarity=0.203  Sum_probs=82.5

Q ss_pred             CCeEEEEecCCceEEEEEecCC-----------CCcceEEEEeCCceEEEEEc-------------C-----CCeEEEEe
Q psy10867         14 SGAISVWEPKGGTLLMSYKGAS-----------VLSPHSMCLLGNDYVLGVEK-------------G-----KPMIQAWP   64 (343)
Q Consensus        14 dg~i~iwd~~~~~~~~~~~~~~-----------~~~v~~~~~~~~~~~~~~~~-------------~-----~~~i~iw~   64 (343)
                      .|.+.+.|- +.+.+.++....           ......+.+.++|..+++..             .     |+.+.-.|
T Consensus        24 ~G~~~~lD~-~y~~i~~v~~~~~~~~~~~~~~~~~d~He~~it~~gt~lvt~~~~~~~dls~~gg~~~g~i~d~~~~EiD  102 (299)
T PF14269_consen   24 YGSYVILDS-SYEVIWNVSAGNDFGTPDGEPGSYADHHEFEITPDGTALVTAYNPTPADLSPVGGPEDGWILDDVFQEID  102 (299)
T ss_pred             cceEEEECC-CCcEEEEEECCCcccccccccCccCCccceEEcCCCcEEEEEccceeccccccCcCCCccEecceeEEec
Confidence            466777774 556666555443           01355667778887777221             1     23445556


Q ss_pred             CCCcccceecc--cC-------------------------CcceEEEEECCCCCEEEEecC-CeEEEEEccCCceEEEec
Q psy10867         65 VNSQEKAQLRL--IC-------------------------PGRISSMQASPDAAYIAVSIE-TKLHMWQISSGRLLATAS  116 (343)
Q Consensus        65 ~~~~~~~~~~~--~~-------------------------~~~v~~~~~s~~~~~l~~~~d-~~i~v~~~~~~~~~~~~~  116 (343)
                      +++++.+....  .|                         ---++++...++|.+|+++.. ..|.+.+..+|+.+..+.
T Consensus       103 i~TgevlfeW~a~DH~~~~~~~~~~~~~~~~g~~~~~~~D~~HiNsV~~~~~G~yLiS~R~~~~i~~I~~~tG~I~W~lg  182 (299)
T PF14269_consen  103 IETGEVLFEWSASDHVDPNDSYDSQDPLPGSGGSSSFPWDYFHINSVDKDDDGDYLISSRNTSTIYKIDPSTGKIIWRLG  182 (299)
T ss_pred             cCCCCEEEEEEhhheecccccccccccccCCCcCCCCCCCccEeeeeeecCCccEEEEecccCEEEEEECCCCcEEEEeC
Confidence            66665542110  00                         012778888889999998754 689999999999999887


Q ss_pred             ccCCCe-----EEEEEecCCCEEEEecCCCeEEEeecC
Q psy10867        117 SHYQPI-----TIVKWSADSNFIVTGGEDGTICVWQLS  149 (343)
Q Consensus       117 ~~~~~v-----~~~~~~~~~~~l~s~~~dg~i~iwd~~  149 (343)
                      +..+.=     ...++-.+.+++-.+..++.|.++|-.
T Consensus       183 G~~~~df~~~~~~f~~QHdar~~~~~~~~~~IslFDN~  220 (299)
T PF14269_consen  183 GKRNSDFTLPATNFSWQHDARFLNESNDDGTISLFDNA  220 (299)
T ss_pred             CCCCCcccccCCcEeeccCCEEeccCCCCCEEEEEcCC
Confidence            652211     113333355555556678899999874

>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family

Probab=90.33  E-value=11  Score=32.62  Aligned_cols=56  Identities=11%  Similarity=-0.091  Sum_probs=37.6

Q ss_pred             ccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCce--EEEee------cCCcEEEEEEcCCC
Q psy10867        181 QHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGED--LLSLI------LDTRLTCVAFDGTE  238 (343)
Q Consensus       181 ~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~--~~~~~------~~~~i~~~~~~~~~  238 (343)
                      ..-...+.|+|.|++  .+|++--..|.|++++..++..  +..+.      .......++++|+-
T Consensus        27 ~GL~~Pw~maflPDG--~llVtER~~G~I~~v~~~~~~~~~~~~l~~v~~~~ge~GLlglal~PdF   90 (454)
T TIGR03606        27 SGLNKPWALLWGPDN--QLWVTERATGKILRVNPETGEVKVVFTLPEIVNDAQHNGLLGLALHPDF   90 (454)
T ss_pred             CCCCCceEEEEcCCC--eEEEEEecCCEEEEEeCCCCceeeeecCCceeccCCCCceeeEEECCCc
Confidence            344567899999998  6666554469999998655432  11111      24668899999874

PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.

>KOG1983|consensus

Probab=90.08  E-value=19  Score=34.93  Aligned_cols=210  Identities=12%  Similarity=0.064  Sum_probs=97.5

Q ss_pred             cceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCC-cceEEEEECC-CCCEEEEecCCeEEEEEccCCceEEEe
Q psy10867         38 SPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICP-GRISSMQASP-DAAYIAVSIETKLHMWQISSGRLLATA  115 (343)
Q Consensus        38 ~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~-~~v~~~~~s~-~~~~l~~~~d~~i~v~~~~~~~~~~~~  115 (343)
                      ....++|+|...++|.+...|.|+++....-+......... ..+..+.+-. .++.++-..+..+.+|.......+.  
T Consensus        37 ~~~~~afD~~q~llai~t~tg~i~~yg~~~ve~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~--  114 (993)
T KOG1983|consen   37 TPSALAFDPTQGLLAIGTRTGAIKIYGQPGVEFVGLHPKQNQINVTRIELLVGISRNLVLSDDDSLHLWSIKIKTGVF--  114 (993)
T ss_pred             CCcceeeccccceEEEEEecccEEEecccceEEEeccccccchhhhheeeeecccccceeecccceeeecccccceee--
Confidence            56788999999999999999999999765444332111111 0111111111 1222222345556666643322211  


Q ss_pred             cccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCC--------------------CCccccccce
Q psy10867        116 SSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSS--------------------GKGVTGLTEP  175 (343)
Q Consensus       116 ~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~  175 (343)
                        +...+++..-.+--.. +-| ..+.+++||..-.....-.........                    ..........
T Consensus       115 --~~~~~~~~~~~~~~~~-~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~  190 (993)
T KOG1983|consen  115 --LKQEITSFVTDPPPDW-LIG-ENGLVKVSDVLRHQLSDLKYAGTESSNFVPYESLSPTLSIEGLVIDLDTVLISLPDA  190 (993)
T ss_pred             --cCCcceeccCCCCcch-hcc-cCceeeEeeechhhhccceeccccccccceeeeeccceeeeccccccccceeecccc
Confidence              1222333332222223 334 666677666543211110000000000                    0000000000


Q ss_pred             eeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEe
Q psy10867        176 LHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCL  255 (343)
Q Consensus       176 ~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~  255 (343)
                      ...+.-+..++.+..+....   -.+.+...+.+..|+.........+.....    ...+++..++++..||.+..||.
T Consensus       191 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~v~~h~Dgs~~fWd~  263 (993)
T KOG1983|consen  191 YLGLSLIEYESLQVLYYSPT---KILIGFNRGLVVIKDRASKYVQSAYLPNGQ----LESRDGSHFVSYHTDGSYAFWDV  263 (993)
T ss_pred             cccccccccccceeeeecCC---Ccceeeeeeeeeehhcccccchhhcccccc----cCccCCceEEEEEecCCEEeeec
Confidence            01222233344444443332   233444555666665433332222221111    11788999999999999999999


Q ss_pred             ecccc
Q psy10867        256 RQVPR  260 (343)
Q Consensus       256 ~~~~~  260 (343)
                      ..+..
T Consensus       264 s~g~~  268 (993)
T KOG1983|consen  264 SSGKL  268 (993)
T ss_pred             CCCce
Confidence            88643

>KOG1898|consensus

Probab=89.69  E-value=19  Score=34.33  Aligned_cols=171  Identities=14%  Similarity=0.175  Sum_probs=96.4

Q ss_pred             eEEEEecCCceEEEEEecCC---CCcceEEEEeCC--ceEEEEEcC-----------CCeEEEEeCC-Ccccceecc--c
Q psy10867         16 AISVWEPKGGTLLMSYKGAS---VLSPHSMCLLGN--DYVLGVEKG-----------KPMIQAWPVN-SQEKAQLRL--I   76 (343)
Q Consensus        16 ~i~iwd~~~~~~~~~~~~~~---~~~v~~~~~~~~--~~~~~~~~~-----------~~~i~iw~~~-~~~~~~~~~--~   76 (343)
                      .|++.|..+++.+..+....   .+.+.++.|+..  ..+++++..           +|.++.|+.- .++.+..+.  .
T Consensus       854 ~I~~~d~~s~~~~~~~~l~~ne~a~~v~~~~fs~~~~~~~~~v~~~~~~~l~~~~~~~g~~ytyk~~~~g~~lellh~T~  933 (1205)
T KOG1898|consen  854 SIRVFDPKSGKIICLVELGQNEAAFSVCAVDFSSSEYQPFVAVGVATTEQLDSKSISSGFVYTYKFVRNGDKLELLHKTE  933 (1205)
T ss_pred             eEEEEcCCCCceEEEEeecCCcchhheeeeeeccCCCceEEEEEeeccccccccccCCCceEEEEEEecCceeeeeeccC
Confidence            48899988888776655433   236677777743  334444432           2345555542 233232222  2


Q ss_pred             CCcceEEEEECCCCCEEEEecCCeEEEEEccCCceEEEec--ccCCCeEEEEEecCCCEEEEecCCCeEEEe--ecCccc
Q psy10867         77 CPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATAS--SHYQPITIVKWSADSNFIVTGGEDGTICVW--QLSRLI  152 (343)
Q Consensus        77 ~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw--d~~~~~  152 (343)
                      -.+++.  +..|-..++.+|....+++||+...++++..+  .-...|..+++  .+..++.|..--.+..+  +....+
T Consensus       934 ~~~~v~--Ai~~f~~~~LagvG~~l~~YdlG~K~lLRk~e~k~~p~~Is~iqt--~~~RI~VgD~qeSV~~~~y~~~~n~ 1009 (1205)
T KOG1898|consen  934 IPGPVG--AICPFQGRVLAGVGRFLRLYDLGKKKLLRKCELKFIPNRISSIQT--YGARIVVGDIQESVHFVRYRREDNQ 1009 (1205)
T ss_pred             CCccce--EEeccCCEEEEecccEEEEeeCChHHHHhhhhhccCceEEEEEee--cceEEEEeeccceEEEEEEecCCCe
Confidence            233444  44565668888888999999998776665443  23456777777  45677777654455444  433332


Q ss_pred             eeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEec
Q psy10867        153 CKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDL  214 (343)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~  214 (343)
                      ...                     ..-..-...|+++.+...+   .++.+..-|.+.+..+
T Consensus      1010 l~~---------------------fadD~~pR~Vt~~~~lD~~---tvagaDrfGNi~~vR~ 1047 (1205)
T KOG1898|consen 1010 LIV---------------------FADDPVPRHVTALELLDYD---TVAGADRFGNIAVVRI 1047 (1205)
T ss_pred             EEE---------------------EeCCCccceeeEEEEecCC---ceeeccccCcEEEEEC
Confidence            111                     1111223446666665554   5666766677666654

>smart00564 PQQ beta-propeller repeat

Probab=89.67  E-value=0.87  Score=22.38  Aligned_cols=25  Identities=28%  Similarity=0.235  Sum_probs=21.3

Q ss_pred             EEEEEeCCCcEEEEecccceeeeec
Q psy10867        293 TLLSSSADETLKIWHTISRQCLRTI  317 (343)
Q Consensus       293 ~l~s~~~dg~i~iwd~~~~~~~~~~  317 (343)
                      .++.++.+|.+..+|.++|+.+.++
T Consensus         8 ~v~~~~~~g~l~a~d~~~G~~~W~~   32 (33)
T smart00564        8 TVYVGSTDGTLYALDAKTGEILWTY   32 (33)
T ss_pred             EEEEEcCCCEEEEEEcccCcEEEEc
Confidence            5777888999999999999887664

Beta-propeller repeat occurring in enzymes with pyrrolo-quinoline quinone (PQQ) as cofactor, in Ire1p-like Ser/Thr kinases, and in prokaryotic dehydrogenases.

>PF01011 PQQ: PQQ enzyme repeat family

Probab=89.35  E-value=1.5  Score=22.62  Aligned_cols=29  Identities=24%  Similarity=0.139  Sum_probs=23.9

Q ss_pred             EEEEeeCCCeEEEEecCCCceEEEeecCC
Q psy10867        199 RVASVSHDRTCKIFDLCTGEDLLSLILDT  227 (343)
Q Consensus       199 ~l~~~~~d~~i~~wd~~~~~~~~~~~~~~  227 (343)
                      .++.++.+|.+.-.|.++|+.+..+....
T Consensus         2 ~v~~~~~~g~l~AlD~~TG~~~W~~~~~~   30 (38)
T PF01011_consen    2 RVYVGTPDGYLYALDAKTGKVLWKFQTGP   30 (38)
T ss_dssp             EEEEETTTSEEEEEETTTTSEEEEEESSS
T ss_pred             EEEEeCCCCEEEEEECCCCCEEEeeeCCC
Confidence            35556999999999999999999887543

; InterPro: IPR002372 Pyrrolo-quinoline quinone (PQQ) is a redox coenzyme, which serves as a cofactor for a number of enzymes (quinoproteins) and particularly for some bacterial dehydrogenases [, ]. A number of bacterial quinoproteins belong to this family. Enzymes in this group have repeats of a beta propeller.; PDB: 1H4I_C 1H4J_E 1W6S_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A 1G72_A ....

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	343
3emh_A	318	Structural Basis Of Wdr5-Mll Interaction Length = 3		3e-13
4a7j_A	318	Symmetric Dimethylation Of H3 Arginine 2 Is A Novel		4e-12
3psl_A	318	Fine-Tuning The Stimulation Of Mll1 Methyltransfera		4e-12
2cnx_A	315	Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.		5e-12
3mxx_A	315	Crystal Structure Of Wdr5 Mutant (S62a) Length = 31		7e-12
2co0_A	315	Wdr5 And Unmodified Histone H3 Complex At 2.25 Angs		1e-11
2h13_A	317	Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length		1e-11
3n0e_A	315	Crystal Structure Of Wdr5 Mutant (W330y) Length = 3		1e-11
2g99_A	308	Structural Basis For The Specific Recognition Of Me		1e-11
2h9l_A	329	Wdr5delta23 Length = 329		1e-11
3n0d_A	315	Crystal Structure Of Wdr5 Mutant (W330f) Length = 3		1e-11
2h9m_A	313	Wdr5 In Complex With Unmodified H3k4 Peptide Length		1e-11
2g9a_A	311	Structural Basis For The Specific Recognition Of Me		1e-11
2xl2_A	334	Wdr5 In Complex With An Rbbp5 Peptide Recruited To		1e-11
3smr_A	312	Crystal Structure Of Human Wd Repeat Domain 5 With		1e-11
2gnq_A	336	Structure Of Wdr5 Length = 336		1e-11
2h68_A	312	Histone H3 Recognition And Presentation By The Wdr5		1e-11
4ggc_A	318	Structural Analysis Of Human Cdc20 Supports Multi-S		7e-07
4ggd_A	431	Structural Analysis Of Human Cdc20 Supports Multisi		8e-07
4gga_A	420	Structural Analysis Of Human Cdc20 Supports Multi-S		8e-07
1trj_A	314	Homology Model Of Yeast Rack1 Protein Fitted Into 1		1e-06
3rfh_A	319	Crystal Structure Of The Yeast Rack1 Dimer In Space		1e-06
3izb_a	319	Localization Of The Small Subunit Ribosomal Protein		1e-06
3rfg_A	319	Crystal Structure Of The Yeast Rack1 Dimer In Space		2e-06
3jyv_R	313	Structure Of The 40s Rrna And Proteins And PE TRNA		2e-06
1vyh_C	410	Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410		2e-06
2ymu_A	577	Structure Of A Highly Repetitive Propeller Structur		2e-06
1erj_A	393	Crystal Structure Of The C-Terminal Wd40 Domain Of		3e-06
3ow8_A	321	Crystal Structure Of The Wd Repeat-Containing Prote		4e-06
3frx_A	319	Crystal Structure Of The Yeast Orthologue Of Rack1,		9e-06
2ovp_B	445	Structure Of The Skp1-Fbw7 Complex Length = 445		8e-05
3zey_7	318	High-resolution Cryo-electron Microscopy Structure		2e-04
3shf_A	1256	Crystal Structure Of The R265s Mutant Of Full-Lengt		4e-04
3sfz_A	1249	Crystal Structure Of Full-Length Murine Apaf-1 Leng		5e-04

>pdb|3EMH|A Chain A, Structural Basis Of Wdr5-Mll Interaction Length = 318

Iteration: 1
 Score = 72.4 bits (176), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 75/298 (25%), Positives = 128/298 (42%), Gaps = 54/298 (18%)
Query: 56  GKPMIQAWPVNSQEKAQLRLICPGR---ISSMQASPDAAYIAVSIETKL-HMWQISSGRL 111
           G P  Q+ P   +    L+    G    +SS++ SP+  ++A S   KL  +W    G+ 
Sbjct: 4   GSPEFQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKF 63
Query: 112 LATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVA------------- 158
             T S H   I+ V WS+DSN +V+  +D T+ +W +S   C +T+              
Sbjct: 64  EKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP 123
Query: 159 ---FGIPGSSGKGV----TGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKI 211
                + GS  + V        + L     HS PV+ V  ++ G  S + S S+D  C+I
Sbjct: 124 QSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDG--SLIVSSSYDGLCRI 181
Query: 212 FDLCTGEDLLSLILDTR--LTCVAFDGTEDNIYMGTSEGVIKSF------CLRQVPRTRD 263
           +D  +G+ L +LI D    ++ V F      I   T +  +K +      CL+       
Sbjct: 182 WDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKT------ 235
Query: 264 HHIQDSTSNPDFIGH--EKQVTSLSCSITGIT-LLSSSADETLKIWHTISRQCLRTIQ 318
                      + GH  EK     + S+TG   ++S S D  + IW+  +++ ++ +Q
Sbjct: 236 -----------YTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQ 282

>pdb|4A7J|A Chain A, Symmetric Dimethylation Of H3 Arginine 2 Is A Novel Histone Mark That Supports Euchromatin Maintenance Length = 318

Iteration: 1
 Score = 68.9 bits (167), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 76/300 (25%), Positives = 129/300 (43%), Gaps = 58/300 (19%)
Query: 56  GKPMIQAWPVNSQEKAQLRLICPGR---ISSMQASPDAAYIAVSIETKL-HMWQISSGRL 111
           G    Q+ P   +    L+    G    +SS++ SP+  ++A S   KL  +W    G+ 
Sbjct: 4   GSSATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKF 63
Query: 112 LATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVA------------- 158
             T S H   I+ V WS+DSN +V+  +D T+ +W +S   C +T+              
Sbjct: 64  EKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP 123
Query: 159 ---FGIPGSSGKGV------TGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTC 209
                + GS  + V      TG  + L     HS PV+ V  ++ G  S + S S+D  C
Sbjct: 124 QSNLIVSGSFDESVRIWDVKTG--KCLKTLPAHSDPVSAVHFNRDG--SLIVSSSYDGLC 179
Query: 210 KIFDLCTGEDLLSLILDTR--LTCVAFDGTEDNIYMGTSEGVIKSF------CLRQVPRT 261
           +I+D  +G+ L +LI D    ++ V F      I   T +  +K +      CL+     
Sbjct: 180 RIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKT---- 235
Query: 262 RDHHIQDSTSNPDFIGH--EKQVTSLSCSITGIT-LLSSSADETLKIWHTISRQCLRTIQ 318
                        + GH  EK     + S+TG   ++S S D  + IW+  +++ ++ +Q
Sbjct: 236 -------------YTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQ 282

>pdb|3PSL|A Chain A, Fine-Tuning The Stimulation Of Mll1 Methyltransferase Activity By A Histone H3 Based Peptide Mimetic Length = 318

Iteration: 1
 Score = 68.6 bits (166), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 76/300 (25%), Positives = 129/300 (43%), Gaps = 58/300 (19%)
Query: 56  GKPMIQAWPVNSQEKAQLRLICPGR---ISSMQASPDAAYIAVSIETKL-HMWQISSGRL 111
           G    Q+ P   +    L+    G    +SS++ SP+  ++A S   KL  +W    G+ 
Sbjct: 4   GSSATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKF 63
Query: 112 LATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVA------------- 158
             T S H   I+ V WS+DSN +V+  +D T+ +W +S   C +T+              
Sbjct: 64  EKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP 123
Query: 159 ---FGIPGSSGKGV------TGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTC 209
                + GS  + V      TG  + L     HS PV+ V  ++ G  S + S S+D  C
Sbjct: 124 QSNLIVSGSFDESVRIWDVKTG--KCLKTLPAHSDPVSAVHFNRDG--SLIVSSSYDGLC 179
Query: 210 KIFDLCTGEDLLSLILDTR--LTCVAFDGTEDNIYMGTSEGVIKSF------CLRQVPRT 261
           +I+D  +G+ L +LI D    ++ V F      I   T +  +K +      CL+     
Sbjct: 180 RIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKT---- 235
Query: 262 RDHHIQDSTSNPDFIGH--EKQVTSLSCSITGIT-LLSSSADETLKIWHTISRQCLRTIQ 318
                        + GH  EK     + S+TG   ++S S D  + IW+  +++ ++ +Q
Sbjct: 236 -------------YTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQ 282

>pdb|2CNX|A Chain A, Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.1 Angstrom Length = 315

Iteration: 1
 Score = 68.6 bits (166), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 71/272 (26%), Positives = 121/272 (44%), Gaps = 55/272 (20%)
Query: 81  ISSMQASPDAAYIAVSIETKL-HMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGE 139
           +SS++ SP+  ++A S   KL  +W    G+   T S H   I+ V WS+DSN +V+  +
Sbjct: 29  VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASD 88
Query: 140 DGTICVWQLSRLICKQTVA----------------FGIPGSSGKGV------TGLTEPLH 177
           D T+ +W +S   C +T+                   + GS  + V      TG+   L 
Sbjct: 89  DKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGMC--LK 146
Query: 178 VKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTR--LTCVAFD 235
               HS PV+ V  ++ G  S + S S+D  C+I+D  +G+ L +LI D    ++ V F 
Sbjct: 147 TLPAHSDPVSAVHFNRDG--SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 204
Query: 236 GTEDNIYMGTSEGVIKSF------CLRQVPRTRDHHIQDSTSNPDFIGH--EKQVTSLSC 287
                I   T +  +K +      CL+                  + GH  EK     + 
Sbjct: 205 PNGKYILAATLDNTLKLWDYSKGKCLKT-----------------YTGHKNEKYCIFANF 247
Query: 288 SIT-GITLLSSSADETLKIWHTISRQCLRTIQ 318
           S+T G  ++S S D  + IW+  +++ ++ +Q
Sbjct: 248 SVTGGKWIVSGSEDNMVYIWNLQTKEIVQKLQ 279

>pdb|3MXX|A Chain A, Crystal Structure Of Wdr5 Mutant (S62a) Length = 315

Iteration: 1
 Score = 68.2 bits (165), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 71/272 (26%), Positives = 121/272 (44%), Gaps = 55/272 (20%)
Query: 81  ISSMQASPDAAYIAVSIETKL-HMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGE 139
           +SS++ SP+  ++A S   KL  +W    G+   T S H   I+ V WS+DSN +V+  +
Sbjct: 29  VSSVKFSPNGEWLAASSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASD 88
Query: 140 DGTICVWQLSRLICKQTVA----------------FGIPGSSGKGV------TGLTEPLH 177
           D T+ +W +S   C +T+                   + GS  + V      TG  + L 
Sbjct: 89  DKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTG--KCLK 146
Query: 178 VKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTR--LTCVAFD 235
               HS PV+ V  ++ G  S + S S+D  C+I+D  +G+ L +LI D    ++ V F 
Sbjct: 147 TLPAHSDPVSAVHFNRDG--SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 204
Query: 236 GTEDNIYMGTSEGVIKSF------CLRQVPRTRDHHIQDSTSNPDFIGH--EKQVTSLSC 287
                I   T +  +K +      CL+                  + GH  EK     + 
Sbjct: 205 PNGKYILAATLDNTLKLWDYSKGKCLKT-----------------YTGHKNEKYCIFANF 247
Query: 288 SITGIT-LLSSSADETLKIWHTISRQCLRTIQ 318
           S+TG   ++S S D  + IW+  +++ ++ +Q
Sbjct: 248 SVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQ 279

>pdb|2CO0|A Chain A, Wdr5 And Unmodified Histone H3 Complex At 2.25 Angstrom Length = 315

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 71/272 (26%), Positives = 121/272 (44%), Gaps = 55/272 (20%)
Query: 81  ISSMQASPDAAYIAVSIETKL-HMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGE 139
           +SS++ SP+  ++A S   KL  +W    G+   T S H   I+ V WS+DSN +V+  +
Sbjct: 29  VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASD 88
Query: 140 DGTICVWQLSRLICKQTVA----------------FGIPGSSGKGV------TGLTEPLH 177
           D T+ +W +S   C +T+                   + GS  + V      TG+   L 
Sbjct: 89  DKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGMC--LK 146
Query: 178 VKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTR--LTCVAFD 235
               HS PV+ V  ++ G  S + S S+D  C+I+D  +G+ L +LI D    ++ V F 
Sbjct: 147 TLPAHSDPVSAVHFNRDG--SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 204
Query: 236 GTEDNIYMGTSEGVIKSF------CLRQVPRTRDHHIQDSTSNPDFIGH--EKQVTSLSC 287
                I   T +  +K +      CL+                  + GH  EK     + 
Sbjct: 205 PNGKYILAATLDNDLKLWDYSKGKCLKT-----------------YTGHKNEKYCIFANF 247
Query: 288 SIT-GITLLSSSADETLKIWHTISRQCLRTIQ 318
           S+T G  ++S S D  + IW+  +++ ++ +Q
Sbjct: 248 SVTGGKWIVSGSEDNMVYIWNLQTKEIVQKLQ 279

>pdb|2H13|A Chain A, Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length = 317

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 75/295 (25%), Positives = 128/295 (43%), Gaps = 58/295 (19%)
Query: 61  QAWPVNSQEKAQLRLICPGR---ISSMQASPDAAYIAVSIETKL-HMWQISSGRLLATAS 116
           Q+ P   +    L+    G    +SS++ SP+  ++A S   KL  +W    G+   T S
Sbjct: 8   QSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS 67
Query: 117 SHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVA----------------FG 160
            H   I+ V WS+DSN +V+  +D T+ +W +S   C +T+                   
Sbjct: 68  GHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLI 127
Query: 161 IPGSSGKGV------TGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDL 214
           + GS  + V      TG  + L     HS PV+ V  ++ G  S + S S+D  C+I+D 
Sbjct: 128 VSGSFDESVRIWDVKTG--KCLKTLPAHSDPVSAVHFNRDG--SLIVSSSYDGLCRIWDT 183
Query: 215 CTGEDLLSLILDTR--LTCVAFDGTEDNIYMGTSEGVIKSF------CLRQVPRTRDHHI 266
            +G+ L +LI D    ++ V F      I   T +  +K +      CL+          
Sbjct: 184 ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKT--------- 234
Query: 267 QDSTSNPDFIGH--EKQVTSLSCSITGIT-LLSSSADETLKIWHTISRQCLRTIQ 318
                   + GH  EK     + S+TG   ++S S D  + IW+  +++ ++ +Q
Sbjct: 235 --------YTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQ 281

>pdb|3N0E|A Chain A, Crystal Structure Of Wdr5 Mutant (W330y) Length = 315

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 71/272 (26%), Positives = 121/272 (44%), Gaps = 55/272 (20%)
Query: 81  ISSMQASPDAAYIAVSIETKL-HMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGE 139
           +SS++ SP+  ++A S   KL  +W    G+   T S H   I+ V WS+DSN +V+  +
Sbjct: 29  VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASD 88
Query: 140 DGTICVWQLSRLICKQTVA----------------FGIPGSSGKGV------TGLTEPLH 177
           D T+ +W +S   C +T+                   + GS  + V      TG  + L 
Sbjct: 89  DKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTG--KCLK 146
Query: 178 VKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTR--LTCVAFD 235
               HS PV+ V  ++ G  S + S S+D  C+I+D  +G+ L +LI D    ++ V F 
Sbjct: 147 TLPAHSDPVSAVHFNRDG--SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 204
Query: 236 GTEDNIYMGTSEGVIKSF------CLRQVPRTRDHHIQDSTSNPDFIGH--EKQVTSLSC 287
                I   T +  +K +      CL+                  + GH  EK     + 
Sbjct: 205 PNGKYILAATLDNTLKLWDYSKGKCLKT-----------------YTGHKNEKYCIFANF 247
Query: 288 SITGIT-LLSSSADETLKIWHTISRQCLRTIQ 318
           S+TG   ++S S D  + IW+  +++ ++ +Q
Sbjct: 248 SVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQ 279

>pdb|2G99|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 308

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 71/272 (26%), Positives = 121/272 (44%), Gaps = 55/272 (20%)
Query: 81  ISSMQASPDAAYIAVSIETKL-HMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGE 139
           +SS++ SP+  ++A S   KL  +W    G+   T S H   I+ V WS+DSN +V+  +
Sbjct: 22  VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASD 81
Query: 140 DGTICVWQLSRLICKQTVA----------------FGIPGSSGKGV------TGLTEPLH 177
           D T+ +W +S   C +T+                   + GS  + V      TG  + L 
Sbjct: 82  DKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTG--KCLK 139
Query: 178 VKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTR--LTCVAFD 235
               HS PV+ V  ++ G  S + S S+D  C+I+D  +G+ L +LI D    ++ V F 
Sbjct: 140 TLPAHSDPVSAVHFNRDG--SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 197
Query: 236 GTEDNIYMGTSEGVIKSF------CLRQVPRTRDHHIQDSTSNPDFIGH--EKQVTSLSC 287
                I   T +  +K +      CL+                  + GH  EK     + 
Sbjct: 198 PNGKYILAATLDNTLKLWDYSKGKCLKT-----------------YTGHKNEKYCIFANF 240
Query: 288 SIT-GITLLSSSADETLKIWHTISRQCLRTIQ 318
           S+T G  ++S S D  + IW+  +++ ++ +Q
Sbjct: 241 SVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQ 272

>pdb|2H9L|A Chain A, Wdr5delta23 Length = 329

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 71/272 (26%), Positives = 121/272 (44%), Gaps = 55/272 (20%)
Query: 81  ISSMQASPDAAYIAVSIETKL-HMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGE 139
           +SS++ SP+  ++A S   KL  +W    G+   T S H   I+ V WS+DSN +V+  +
Sbjct: 43  VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASD 102
Query: 140 DGTICVWQLSRLICKQTVA----------------FGIPGSSGKGV------TGLTEPLH 177
           D T+ +W +S   C +T+                   + GS  + V      TG  + L 
Sbjct: 103 DKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTG--KCLK 160
Query: 178 VKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTR--LTCVAFD 235
               HS PV+ V  ++ G  S + S S+D  C+I+D  +G+ L +LI D    ++ V F 
Sbjct: 161 TLPAHSDPVSAVHFNRDG--SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 218
Query: 236 GTEDNIYMGTSEGVIKSF------CLRQVPRTRDHHIQDSTSNPDFIGH--EKQVTSLSC 287
                I   T +  +K +      CL+                  + GH  EK     + 
Sbjct: 219 PNGKYILAATLDNTLKLWDYSKGKCLKT-----------------YTGHKNEKYCIFANF 261
Query: 288 SITGIT-LLSSSADETLKIWHTISRQCLRTIQ 318
           S+TG   ++S S D  + IW+  +++ ++ +Q
Sbjct: 262 SVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQ 293

>pdb|3N0D|A Chain A, Crystal Structure Of Wdr5 Mutant (W330f) Length = 315

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 71/272 (26%), Positives = 121/272 (44%), Gaps = 55/272 (20%)
Query: 81  ISSMQASPDAAYIAVSIETKL-HMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGE 139
           +SS++ SP+  ++A S   KL  +W    G+   T S H   I+ V WS+DSN +V+  +
Sbjct: 29  VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASD 88
Query: 140 DGTICVWQLSRLICKQTVA----------------FGIPGSSGKGV------TGLTEPLH 177
           D T+ +W +S   C +T+                   + GS  + V      TG  + L 
Sbjct: 89  DKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTG--KCLK 146
Query: 178 VKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTR--LTCVAFD 235
               HS PV+ V  ++ G  S + S S+D  C+I+D  +G+ L +LI D    ++ V F 
Sbjct: 147 TLPAHSDPVSAVHFNRDG--SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 204
Query: 236 GTEDNIYMGTSEGVIKSF------CLRQVPRTRDHHIQDSTSNPDFIGH--EKQVTSLSC 287
                I   T +  +K +      CL+                  + GH  EK     + 
Sbjct: 205 PNGKYILAATLDNTLKLWDYSKGKCLKT-----------------YTGHKNEKYCIFANF 247
Query: 288 SITGIT-LLSSSADETLKIWHTISRQCLRTIQ 318
           S+TG   ++S S D  + IW+  +++ ++ +Q
Sbjct: 248 SVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQ 279

>pdb|2H9M|A Chain A, Wdr5 In Complex With Unmodified H3k4 Peptide Length = 313

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 75/295 (25%), Positives = 128/295 (43%), Gaps = 58/295 (19%)
Query: 61  QAWPVNSQEKAQLRLICPGR---ISSMQASPDAAYIAVSIETKL-HMWQISSGRLLATAS 116
           Q+ P   +    L+    G    +SS++ SP+  ++A S   KL  +W    G+   T S
Sbjct: 4   QSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS 63
Query: 117 SHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVA----------------FG 160
            H   I+ V WS+DSN +V+  +D T+ +W +S   C +T+                   
Sbjct: 64  GHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLI 123
Query: 161 IPGSSGKGV------TGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDL 214
           + GS  + V      TG  + L     HS PV+ V  ++ G  S + S S+D  C+I+D 
Sbjct: 124 VSGSFDESVRIWDVKTG--KCLKTLPAHSDPVSAVHFNRDG--SLIVSSSYDGLCRIWDT 179
Query: 215 CTGEDLLSLILDTR--LTCVAFDGTEDNIYMGTSEGVIKSF------CLRQVPRTRDHHI 266
            +G+ L +LI D    ++ V F      I   T +  +K +      CL+          
Sbjct: 180 ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKT--------- 230
Query: 267 QDSTSNPDFIGH--EKQVTSLSCSITGIT-LLSSSADETLKIWHTISRQCLRTIQ 318
                   + GH  EK     + S+TG   ++S S D  + IW+  +++ ++ +Q
Sbjct: 231 --------YTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQ 277

>pdb|2G9A|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 311

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 71/272 (26%), Positives = 121/272 (44%), Gaps = 55/272 (20%)
Query: 81  ISSMQASPDAAYIAVSIETKL-HMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGE 139
           +SS++ SP+  ++A S   KL  +W    G+   T S H   I+ V WS+DSN +V+  +
Sbjct: 25  VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASD 84
Query: 140 DGTICVWQLSRLICKQTVA----------------FGIPGSSGKGV------TGLTEPLH 177
           D T+ +W +S   C +T+                   + GS  + V      TG  + L 
Sbjct: 85  DKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTG--KCLK 142
Query: 178 VKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTR--LTCVAFD 235
               HS PV+ V  ++ G  S + S S+D  C+I+D  +G+ L +LI D    ++ V F 
Sbjct: 143 TLPAHSDPVSAVHFNRDG--SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 200
Query: 236 GTEDNIYMGTSEGVIKSF------CLRQVPRTRDHHIQDSTSNPDFIGH--EKQVTSLSC 287
                I   T +  +K +      CL+                  + GH  EK     + 
Sbjct: 201 PNGKYILAATLDNTLKLWDYSKGKCLKT-----------------YTGHKNEKYCIFANF 243
Query: 288 SITGIT-LLSSSADETLKIWHTISRQCLRTIQ 318
           S+TG   ++S S D  + IW+  +++ ++ +Q
Sbjct: 244 SVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQ 275

>pdb|2XL2|A Chain A, Wdr5 In Complex With An Rbbp5 Peptide Recruited To Novel Site Length = 334

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 71/272 (26%), Positives = 121/272 (44%), Gaps = 55/272 (20%)
Query: 81  ISSMQASPDAAYIAVSIETKL-HMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGE 139
           +SS++ SP+  ++A S   KL  +W    G+   T S H   I+ V WS+DSN +V+  +
Sbjct: 48  VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASD 107
Query: 140 DGTICVWQLSRLICKQTVA----------------FGIPGSSGKGV------TGLTEPLH 177
           D T+ +W +S   C +T+                   + GS  + V      TG  + L 
Sbjct: 108 DKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTG--KCLK 165
Query: 178 VKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTR--LTCVAFD 235
               HS PV+ V  ++ G  S + S S+D  C+I+D  +G+ L +LI D    ++ V F 
Sbjct: 166 TLPAHSDPVSAVHFNRDG--SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 223
Query: 236 GTEDNIYMGTSEGVIKSF------CLRQVPRTRDHHIQDSTSNPDFIGH--EKQVTSLSC 287
                I   T +  +K +      CL+                  + GH  EK     + 
Sbjct: 224 PNGKYILAATLDNTLKLWDYSKGKCLKT-----------------YTGHKNEKYCIFANF 266
Query: 288 SITGIT-LLSSSADETLKIWHTISRQCLRTIQ 318
           S+TG   ++S S D  + IW+  +++ ++ +Q
Sbjct: 267 SVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQ 298

>pdb|3SMR|A Chain A, Crystal Structure Of Human Wd Repeat Domain 5 With Compound Length = 312

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 75/295 (25%), Positives = 128/295 (43%), Gaps = 58/295 (19%)
Query: 61  QAWPVNSQEKAQLRLICPGR---ISSMQASPDAAYIAVSIETKL-HMWQISSGRLLATAS 116
           Q+ P   +    L+    G    +SS++ SP+  ++A S   KL  +W    G+   T S
Sbjct: 3   QSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS 62
Query: 117 SHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVA----------------FG 160
            H   I+ V WS+DSN +V+  +D T+ +W +S   C +T+                   
Sbjct: 63  GHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLI 122
Query: 161 IPGSSGKGV------TGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDL 214
           + GS  + V      TG  + L     HS PV+ V  ++ G  S + S S+D  C+I+D 
Sbjct: 123 VSGSFDESVRIWDVKTG--KCLKTLPAHSDPVSAVHFNRDG--SLIVSSSYDGLCRIWDT 178
Query: 215 CTGEDLLSLILDTR--LTCVAFDGTEDNIYMGTSEGVIKSF------CLRQVPRTRDHHI 266
            +G+ L +LI D    ++ V F      I   T +  +K +      CL+          
Sbjct: 179 ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKT--------- 229
Query: 267 QDSTSNPDFIGH--EKQVTSLSCSIT-GITLLSSSADETLKIWHTISRQCLRTIQ 318
                   + GH  EK     + S+T G  ++S S D  + IW+  +++ ++ +Q
Sbjct: 230 --------YTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQ 276

>pdb|2GNQ|A Chain A, Structure Of Wdr5 Length = 336

Iteration: 1
 Score = 67.0 bits (162), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 71/272 (26%), Positives = 121/272 (44%), Gaps = 55/272 (20%)
Query: 81  ISSMQASPDAAYIAVSIETKL-HMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGE 139
           +SS++ SP+  ++A S   KL  +W    G+   T S H   I+ V WS+DSN +V+  +
Sbjct: 50  VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASD 109
Query: 140 DGTICVWQLSRLICKQTVA----------------FGIPGSSGKGV------TGLTEPLH 177
           D T+ +W +S   C +T+                   + GS  + V      TG  + L 
Sbjct: 110 DKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTG--KCLK 167
Query: 178 VKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTR--LTCVAFD 235
               HS PV+ V  ++ G  S + S S+D  C+I+D  +G+ L +LI D    ++ V F 
Sbjct: 168 TLPAHSDPVSAVHFNRDG--SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 225
Query: 236 GTEDNIYMGTSEGVIKSF------CLRQVPRTRDHHIQDSTSNPDFIGH--EKQVTSLSC 287
                I   T +  +K +      CL+                  + GH  EK     + 
Sbjct: 226 PNGKYILAATLDNTLKLWDYSKGKCLKT-----------------YTGHKNEKYCIFANF 268
Query: 288 SITGIT-LLSSSADETLKIWHTISRQCLRTIQ 318
           S+TG   ++S S D  + IW+  +++ ++ +Q
Sbjct: 269 SVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQ 300

>pdb|2H68|A Chain A, Histone H3 Recognition And Presentation By The Wdr5 Module Of The Mll1 Complex Length = 312

Iteration: 1
 Score = 67.0 bits (162), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 75/295 (25%), Positives = 128/295 (43%), Gaps = 58/295 (19%)
Query: 61  QAWPVNSQEKAQLRLICPGR---ISSMQASPDAAYIAVSIETKL-HMWQISSGRLLATAS 116
           Q+ P   +    L+    G    +SS++ SP+  ++A S   KL  +W    G+   T S
Sbjct: 3   QSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS 62
Query: 117 SHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVA----------------FG 160
            H   I+ V WS+DSN +V+  +D T+ +W +S   C +T+                   
Sbjct: 63  GHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLI 122
Query: 161 IPGSSGKGV------TGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDL 214
           + GS  + V      TG  + L     HS PV+ V  ++ G  S + S S+D  C+I+D 
Sbjct: 123 VSGSFDESVRIWDVKTG--KCLKTLPAHSDPVSAVHFNRDG--SLIVSSSYDGLCRIWDT 178
Query: 215 CTGEDLLSLILDTR--LTCVAFDGTEDNIYMGTSEGVIKSF------CLRQVPRTRDHHI 266
            +G+ L +LI D    ++ V F      I   T +  +K +      CL+          
Sbjct: 179 ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKT--------- 229
Query: 267 QDSTSNPDFIGH--EKQVTSLSCSIT-GITLLSSSADETLKIWHTISRQCLRTIQ 318
                   + GH  EK     + S+T G  ++S S D  + IW+  +++ ++ +Q
Sbjct: 230 --------YTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQ 276

>pdb|4GGC|A Chain A, Structural Analysis Of Human Cdc20 Supports Multi-Site Degron Recognition By ApcC Length = 318

Iteration: 1
 Score = 51.6 bits (122), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 70/313 (22%), Positives = 127/313 (40%), Gaps = 49/313 (15%)
Query: 5   NEVAFSYDGSGAISVWEPKGGTLL----MSYKGASVLSPHSMCLLGNDYVLGVEKGKPMI 60
           N +A + D S  + +W    G +L    M   G  +    S+  +     L V      +
Sbjct: 37  NVLAVALDNS--VYLWSASSGDILQLLQMEQPGEYI---SSVAWIKEGNYLAVGTSSAEV 91
Query: 61  QAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQIS---SGRLLATASS 117
           Q W V  Q++ +       R+ S+  +   +YI  S     H+       +   +AT S 
Sbjct: 92  QLWDVQQQKRLRNMTSHSARVGSLSWN---SYILSSGSRSGHIHHHDVRVAEHHVATLSG 148
Query: 118 HYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLH 177
           H Q +  ++W+ D   + +GG D  + VW               P + G+G  G   PL 
Sbjct: 149 HSQEVCGLRWAPDGRHLASGGNDNLVNVW---------------PSAPGEG--GWV-PLQ 190
Query: 178 VKSQHSLPVTHVTLSKLGAKSRVASV---SHDRTCKIFDLCTGEDLLSLILDTRLTCVAF 234
             +QH   V  V       +S V +    + DR  +I+++C+G  L ++   +++  + +
Sbjct: 191 TFTQHQGAVKAVAWCPW--QSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILW 248
Query: 235 DGTEDNIYMGTSEGVIKS-FCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGIT 293
                 +  G   G  ++   + + P              +  GH  +V SL+ S  G T
Sbjct: 249 SPHYKELISG--HGFAQNQLVIWKYPTM--------AKVAELKGHTSRVLSLTMSPDGAT 298
Query: 294 LLSSSADETLKIW 306
           + S++ADETL++W
Sbjct: 299 VASAAADETLRLW 311

>pdb|4GGD|A Chain A, Structural Analysis Of Human Cdc20 Supports Multisite Degron Recognition By ApcC. Length = 431

Iteration: 1
 Score = 51.2 bits (121), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 70/313 (22%), Positives = 127/313 (40%), Gaps = 49/313 (15%)
Query: 5   NEVAFSYDGSGAISVWEPKGGTLL----MSYKGASVLSPHSMCLLGNDYVLGVEKGKPMI 60
           N +A + D S  + +W    G +L    M   G  +    S+  +     L V      +
Sbjct: 128 NVLAVALDNS--VYLWSASSGDILQLLQMEQPGEYI---SSVAWIKEGNYLAVGTSSAEV 182
Query: 61  QAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQIS---SGRLLATASS 117
           Q W V  Q++ +       R+ S+  +   +YI  S     H+       +   +AT S 
Sbjct: 183 QLWDVQQQKRLRNMTSHSARVGSLSWN---SYILSSGSRSGHIHHHDVRVAEHHVATLSG 239
Query: 118 HYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLH 177
           H Q +  ++W+ D   + +GG D  + VW               P + G+G  G   PL 
Sbjct: 240 HSQEVCGLRWAPDGRHLASGGNDNLVNVW---------------PSAPGEG--GWV-PLQ 281
Query: 178 VKSQHSLPVTHVTLSKLGAKSRVASV---SHDRTCKIFDLCTGEDLLSLILDTRLTCVAF 234
             +QH   V  V       +S V +    + DR  +I+++C+G  L ++   +++  + +
Sbjct: 282 TFTQHQGAVKAVAWCPW--QSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILW 339
Query: 235 DGTEDNIYMGTSEGVIKS-FCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGIT 293
                 +  G   G  ++   + + P              +  GH  +V SL+ S  G T
Sbjct: 340 SPHYKELISG--HGFAQNQLVIWKYPTM--------AKVAELKGHTSRVLSLTMSPDGAT 389
Query: 294 LLSSSADETLKIW 306
           + S++ADETL++W
Sbjct: 390 VASAAADETLRLW 402

>pdb|4GGA|A Chain A, Structural Analysis Of Human Cdc20 Supports Multi-Site Degron Recognition By ApcC Length = 420

Iteration: 1
 Score = 51.2 bits (121), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 70/313 (22%), Positives = 127/313 (40%), Gaps = 49/313 (15%)
Query: 5   NEVAFSYDGSGAISVWEPKGGTLL----MSYKGASVLSPHSMCLLGNDYVLGVEKGKPMI 60
           N +A + D S  + +W    G +L    M   G  +    S+  +     L V      +
Sbjct: 117 NVLAVALDNS--VYLWSASSGDILQLLQMEQPGEYI---SSVAWIKEGNYLAVGTSSAEV 171
Query: 61  QAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQIS---SGRLLATASS 117
           Q W V  Q++ +       R+ S+  +   +YI  S     H+       +   +AT S 
Sbjct: 172 QLWDVQQQKRLRNMTSHSARVGSLSWN---SYILSSGSRSGHIHHHDVRVAEHHVATLSG 228
Query: 118 HYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLH 177
           H Q +  ++W+ D   + +GG D  + VW               P + G+G  G   PL 
Sbjct: 229 HSQEVCGLRWAPDGRHLASGGNDNLVNVW---------------PSAPGEG--GWV-PLQ 270
Query: 178 VKSQHSLPVTHVTLSKLGAKSRVASV---SHDRTCKIFDLCTGEDLLSLILDTRLTCVAF 234
             +QH   V  V       +S V +    + DR  +I+++C+G  L ++   +++  + +
Sbjct: 271 TFTQHQGAVKAVAWCPW--QSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILW 328
Query: 235 DGTEDNIYMGTSEGVIKS-FCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGIT 293
                 +  G   G  ++   + + P              +  GH  +V SL+ S  G T
Sbjct: 329 SPHYKELISG--HGFAQNQLVIWKYPTM--------AKVAELKGHTSRVLSLTMSPDGAT 378
Query: 294 LLSSSADETLKIW 306
           + S++ADETL++W
Sbjct: 379 VASAAADETLRLW 391

>pdb|1TRJ|A Chain A, Homology Model Of Yeast Rack1 Protein Fitted Into 11.7a Cryo-em Map Of Yeast 80s Ribosome Length = 314

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/234 (23%), Positives = 94/234 (40%), Gaps = 64/234 (27%)
Query: 132 NFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTL 191
           N +++   D T+  W+L+    K    FG+P  S KG             HS  V   TL
Sbjct: 31  NLLLSASRDKTLISWKLTGDDQK----FGVPVRSFKG-------------HSHIVQDCTL 73
Query: 192 SKLGAKSRVASVSHDRTCKIFDLCTGE----------DLLSLILDTRLTCVAFDGTEDNI 241
           +  GA +   S S D+T +++D+ TGE          D++S+ +D + + +     +  I
Sbjct: 74  TADGAYA--LSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTI 131
Query: 242 YMGTSEGVIKSFCL-------------RQVPRTR-------------DHHIQDSTSN--- 272
            + T    IK  CL             R VP  +             D  ++    N   
Sbjct: 132 KVWT----IKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQ 187
Query: 273 --PDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQHKGPVL 324
              DFIGH   + +L+ S  G  + S+  D  + +W+  +++ + T+  +  V 
Sbjct: 188 IEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQDEVF 241

>pdb|3RFH|A Chain A, Crystal Structure Of The Yeast Rack1 Dimer In Space Group P21 Length = 319

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/234 (23%), Positives = 94/234 (40%), Gaps = 64/234 (27%)
Query: 132 NFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTL 191
           N +++   D T+  W+L+    K    FG+P  S KG             HS  V   TL
Sbjct: 31  NLLLSASRDKTLISWKLTGDDQK----FGVPVRSFKG-------------HSHIVQDCTL 73
Query: 192 SKLGAKSRVASVSHDRTCKIFDLCTGE----------DLLSLILDTRLTCVAFDGTEDNI 241
           +  GA +   S S D+T +++D+ TGE          D++S+ +D + + +     +  I
Sbjct: 74  TADGAYA--LSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTI 131
Query: 242 YMGTSEGVIKSFCL-------------RQVPRTR-------------DHHIQDSTSN--- 272
            + T    IK  CL             R VP  +             D  ++    N   
Sbjct: 132 KVWT----IKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQ 187
Query: 273 --PDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQHKGPVL 324
              DFIGH   + +L+ S  G  + S+  D  + +W+  +++ + T+  +  V 
Sbjct: 188 IEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQDEVF 241

>pdb|3IZB|AA Chain a, Localization Of The Small Subunit Ribosomal Proteins Into A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae Translating 80s Ribosome Length = 319

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/234 (23%), Positives = 94/234 (40%), Gaps = 64/234 (27%)
Query: 132 NFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTL 191
           N +++   D T+  W+L+    K    FG+P  S KG             HS  V   TL
Sbjct: 31  NLLLSASRDKTLISWKLTGDDQK----FGVPVRSFKG-------------HSHIVQDCTL 73
Query: 192 SKLGAKSRVASVSHDRTCKIFDLCTGE----------DLLSLILDTRLTCVAFDGTEDNI 241
           +  GA +   S S D+T +++D+ TGE          D++S+ +D + + +     +  I
Sbjct: 74  TADGAYA--LSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTI 131
Query: 242 YMGTSEGVIKSFCL-------------RQVPRTR-------------DHHIQDSTSN--- 272
            + T    IK  CL             R VP  +             D  ++    N   
Sbjct: 132 KVWT----IKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQ 187
Query: 273 --PDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQHKGPVL 324
              DFIGH   + +L+ S  G  + S+  D  + +W+  +++ + T+  +  V 
Sbjct: 188 IEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQDEVF 241

>pdb|3RFG|A Chain A, Crystal Structure Of The Yeast Rack1 Dimer In Space Group P63 Length = 319

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/234 (23%), Positives = 94/234 (40%), Gaps = 64/234 (27%)
Query: 132 NFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTL 191
           N +++   D T+  W+L+    K    FG+P  S KG             HS  V   TL
Sbjct: 31  NLLLSASRDKTLISWKLTGDDQK----FGVPVRSFKG-------------HSHIVQDCTL 73
Query: 192 SKLGAKSRVASVSHDRTCKIFDLCTGE----------DLLSLILDTRLTCVAFDGTEDNI 241
           +  GA +   S S D+T +++D+ TGE          D++S+ +D + + +     +  I
Sbjct: 74  TADGAYA--LSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTI 131
Query: 242 YMGTSEGVIKSFCL-------------RQVPRTR-------------DHHIQDSTSN--- 272
            + T    IK  CL             R VP  +             D  ++    N   
Sbjct: 132 KVWT----IKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQ 187
Query: 273 --PDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQHKGPVL 324
              DFIGH   + +L+ S  G  + S+  D  + +W+  +++ + T+  +  V 
Sbjct: 188 IEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQDEVF 241

>pdb|3JYV|R Chain R, Structure Of The 40s Rrna And Proteins And PE TRNA FOR EUKARYOTIC Ribosome Based On Cryo-Em Map Of Thermomyces Lanuginosus Ribosome At 8.9a Resolution Length = 313

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/234 (23%), Positives = 94/234 (40%), Gaps = 64/234 (27%)
Query: 132 NFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTL 191
           N +++   D T+  W+L+    K    FG+P  S KG             HS  V   TL
Sbjct: 25  NLLLSASRDKTLISWKLTGDDQK----FGVPVRSFKG-------------HSHIVQDCTL 67
Query: 192 SKLGAKSRVASVSHDRTCKIFDLCTGE----------DLLSLILDTRLTCVAFDGTEDNI 241
           +  GA +   S S D+T +++D+ TGE          D++S+ +D + + +     +  I
Sbjct: 68  TADGAYA--LSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTI 125
Query: 242 YMGTSEGVIKSFCL-------------RQVPRTR-------------DHHIQDSTSN--- 272
            + T    IK  CL             R VP  +             D  ++    N   
Sbjct: 126 KVWT----IKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQ 181
Query: 273 --PDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQHKGPVL 324
              DFIGH   + +L+ S  G  + S+  D  + +W+  +++ + T+  +  V 
Sbjct: 182 IEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQDEVF 235

>pdb|1VYH|C Chain C, Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 67/311 (21%), Positives = 122/311 (39%), Gaps = 36/311 (11%)
Query: 7   VAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVN 66
           V  S      I VW+ + G    + KG +  S   +    +  +L        I+ W   
Sbjct: 122 VMVSASEDATIKVWDYETGDFERTLKGHTD-SVQDISFDHSGKLLASCSADMTIKLWDFQ 180
Query: 67  SQEKAQLRLICPGRISSMQASPDAAYI-AVSIETKLHMWQISSGRLLATASSHYQPITIV 125
             E  +        +SS+   P+  +I + S +  + MW++ +G  + T + H + + +V
Sbjct: 181 GFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV 240
Query: 126 KWSADSNFIVTGGEDGTICVWQLSRLICK----------QTVAFGIPGSSGKGVTGLTEP 175
           + + D   I +   D T+ VW ++   CK          + +++  P SS   ++  T  
Sbjct: 241 RPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWA-PESSYSSISEATGS 299
Query: 176 LHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFD 235
              KS    P              + S S D+T K++D+ TG  L++L        V  D
Sbjct: 300 ETKKSGKPGPF-------------LLSGSRDKTIKMWDVSTGMCLMTL--------VGHD 338
Query: 236 GTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLL 295
                +   +    I S    +  R  D+  ++         HE  VTSL    T   ++
Sbjct: 339 NWVRGVLFHSGGKFILSCADDKTLRVWDY--KNKRCMKTLNAHEHFVTSLDFHKTAPYVV 396
Query: 296 SSSADETLKIW 306
           + S D+T+K+W
Sbjct: 397 TGSVDQTVKVW 407

>pdb|2YMU|A Chain A, Structure Of A Highly Repetitive Propeller Structure Length = 577

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 84/356 (23%), Positives = 140/356 (39%), Gaps = 65/356 (18%)
Query: 7   VAFSYDG--------SGAISVWEPKGGTLLMSYKGASVLSPHSMCLLG-----NDYVLGV 53
           VAFS DG           + +W  + G LL +  G      HS  + G     +   +  
Sbjct: 22  VAFSPDGQTIASASDDKTVKLWN-RNGQLLQTLTG------HSSSVWGVAFSPDGQTIAS 74
Query: 54  EKGKPMIQAWPVNSQEKAQLRLICPGRISSMQA---SPDAAYIAVSIETK-LHMWQISSG 109
                 ++ W  N     QL     G  SS++    SPD   IA + + K + +W   +G
Sbjct: 75  ASDDKTVKLWNRN----GQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWN-RNG 129
Query: 110 RLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQ-----LSRLICKQTVAFGIPGS 164
           +LL T + H   +  V +S D   I +  +D T+ +W      L  L    +  +G+  S
Sbjct: 130 QLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFS 189
Query: 165 -SGKGVTGLTEPLHVK------------SQHSLPVTHVTLSKLGAKSRVASVSHDRTCKI 211
             G+ +   ++   VK            + HS  V  V  S  G    +AS S D+T K+
Sbjct: 190 PDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQT--IASASDDKTVKL 247
Query: 212 FDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLR-QVPRTRDHHIQDS 269
           ++   G+ L +L    + +  VAF      I   + +  +K +    Q+ +T        
Sbjct: 248 WNR-NGQLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRNGQLLQT-------- 298
Query: 270 TSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQHKGPVLG 325
                  GH   V  ++ S  G T+ S+S D+T+K+W+   +       H   V G
Sbjct: 299 -----LTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQHLQTLTGHSSSVWG 349

>pdb|1ERJ|A Chain A, Crystal Structure Of The C-Terminal Wd40 Domain Of Tup1 Length = 393

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 59/257 (22%), Positives = 103/257 (40%), Gaps = 39/257 (15%)
Query: 81  ISSMQASPDAAYIAVSIETKL-HMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGE 139
           I S+  SPD  ++A   E +L  +W I + +++     H Q I  + +    + +V+G  
Sbjct: 126 IRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSG 185
Query: 140 DGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSR 199
           D T+ +W L    C  T++                           VT V +S  G    
Sbjct: 186 DRTVRIWDLRTGQCSLTLSI-----------------------EDGVTTVAVSP-GDGKY 221
Query: 200 VASVSHDRTCKIFDLCTGEDLLSLILDTR----------LTCVAFDGTEDNIYMGTSEGV 249
           +A+ S DR  +++D  TG   L   LD+           +  V F     ++  G+ +  
Sbjct: 222 IAAGSLDRAVRVWDSETG--FLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRS 279
Query: 250 IKSFCLRQVPRTRDHHIQDS-TSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHT 308
           +K + L+      D    +S T    +IGH+  V S++ +     +LS S D  +  W  
Sbjct: 280 VKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDK 339
Query: 309 ISRQCLRTIQ-HKGPVL 324
            S   L  +Q H+  V+
Sbjct: 340 KSGNPLLMLQGHRNSVI 356

>pdb|3OW8|A Chain A, Crystal Structure Of The Wd Repeat-Containing Protein 61 Length = 321

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 89/230 (38%), Gaps = 48/230 (20%)
Query: 17  ISVWEPKGGTLLMSYKGASV------LSPHSMCL-----LGNDYVLGVEKGKPMIQAWPV 65
           I +W+ + G  + S     V       SP S  L     +G   + GVE GK        
Sbjct: 104 IRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKK------- 156
Query: 66  NSQEKAQLRLICPGR-ISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPIT 123
                 +  L   G+ I S+  SPD  Y+A  +I+  ++++ I++G+LL T   H  PI 
Sbjct: 157 ------EYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIR 210
Query: 124 IVKWSADSNFIVTGGEDGTICV-----------------WQLSRLICKQTVAFGIPGSSG 166
            + +S DS  +VT  +DG I +                 W L+   C     F    S  
Sbjct: 211 SLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDK 270
Query: 167 KGV---TGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFD 213
                  G    +H    H   V  V  +  G  S++ SV  D+   I+D
Sbjct: 271 SVKVWDVGTRTCVHTFFDHQDQVWGVKYN--GNGSKIVSVGDDQEIHIYD 318

>pdb|3FRX|A Chain A, Crystal Structure Of The Yeast Orthologue Of Rack1, Asc1. Length = 319

Iteration: 1
 Score = 47.8 bits (112), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 54/234 (23%), Positives = 92/234 (39%), Gaps = 64/234 (27%)
Query: 132 NFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTL 191
           N +++   D T+  W+L+    K    FG+P  S KG             HS  V   TL
Sbjct: 31  NLLLSASRDKTLISWKLTGDDQK----FGVPVRSFKG-------------HSHIVQDCTL 73
Query: 192 SKLGAKSRVASVSHDRTCKIFDLCTGE----------DLLSLILDTRLTCVAFDGTEDNI 241
           +  GA +   S S D+T +++D+ TGE          D+ S+ +D + + +     +  I
Sbjct: 74  TADGAYA--LSASWDKTLRLWDVATGETYQRFVGHKSDVXSVDIDKKASXIISGSRDKTI 131
Query: 242 YMGTSEGVIKSFCL-------------RQVPRTR-------------DHHIQDSTSN--- 272
            + T    IK  CL             R VP  +             D  ++    N   
Sbjct: 132 KVWT----IKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKXVKAWNLNQFQ 187
Query: 273 --PDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQHKGPVL 324
              DFIGH   + +L+ S  G  + S+  D  + +W+  +++   T+  +  V 
Sbjct: 188 IEADFIGHNSNINTLTASPDGTLIASAGKDGEIXLWNLAAKKAXYTLSAQDEVF 241

>pdb|2OVP|B Chain B, Structure Of The Skp1-Fbw7 Complex Length = 445

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 75/296 (25%), Positives = 127/296 (42%), Gaps = 53/296 (17%)
Query: 44  LLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SIETKLH 102
           +L  D +L  EK K      P++ + +   ++I PG I S   S   AYI    I+T   
Sbjct: 51  ILAEDNLLWREKCKEEGIDEPLHIKRR---KVIKPGFIHSPWKS---AYIRQHRIDTNWR 104
Query: 103 MWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVA---- 158
             ++ S ++L     H   IT +++    N IV+G +D T+ VW      C +T+     
Sbjct: 105 RGELKSPKVLKGHDDHV--ITCLQFCG--NRIVSGSDDNTLKVWSAVTGKCLRTLVGHTG 160
Query: 159 ----------FGIPGSSGKGVTGLT----EPLHVKSQHSLPVTHVTLSKLGAKSRVASVS 204
                       I GS+ + +        E +H    H+  V  + L     + RV S S
Sbjct: 161 GVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH----EKRVVSGS 216
Query: 205 HDRTCKIFDLCTGEDLLSLILDT-RLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRD 263
            D T +++D+ TG+ L  L+     + CV +DG    +  G  + ++K +     P T  
Sbjct: 217 RDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRR--VVSGAYDFMVKVW----DPETET 270
Query: 264 --HHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTI 317
             H +Q         GH  +V SL     GI ++S S D ++++W   +  C+ T+
Sbjct: 271 CLHTLQ---------GHTNRVYSL--QFDGIHVVSGSLDTSIRVWDVETGNCIHTL 315

>pdb|3ZEY|7 Chain 7, High-resolution Cryo-electron Microscopy Structure Of The Trypanosoma Brucei Ribosome Length = 318

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/241 (22%), Positives = 98/241 (40%), Gaps = 38/241 (15%)
Query: 93  IAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLI 152
           ++ S +  L +W + +G+       H + +  V +S D+  IV+GG D  + VW + +  
Sbjct: 83  VSASWDHSLRLWNLQNGQCQYKFLGHTKDVLSVAFSPDNRQIVSGGRDNALRVWNV-KGE 141
Query: 153 CKQTVAFG----------------IPGSSGKGVTGLTEPLHVKS--------QHSLPVTH 188
           C  T++ G                 P     G   L +   + +         H+  VT 
Sbjct: 142 CMHTLSRGAHTDWVSCVRFSPSLDAPVIVSGGWDNLVKVWDLATGRLVTDLKGHTNYVTS 201
Query: 189 VTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEG 248
           VT+S  G  S  AS   D   +++DL  GE L  +     +  + F      +   T +G
Sbjct: 202 VTVSPDG--SLCASSDKDGVARLWDLTKGEALSEMAAGAPINQICFSPNRYWMCAATEKG 259
Query: 249 VIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEK---QVTSLSCSITGITLLSSSADETLKI 305
            I+ F L      +D  ++ +   P+  G +K   +  S++ S  G TL S   D  +++
Sbjct: 260 -IRIFDLEN----KDIIVELA---PEHQGSKKIVPECVSIAWSADGSTLYSGYTDNVIRV 311
Query: 306 W 306
           W
Sbjct: 312 W 312

>pdb|3SHF|A Chain A, Crystal Structure Of The R265s Mutant Of Full-Length Murine Apaf-1 Length = 1256

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 47/217 (21%), Positives = 93/217 (42%), Gaps = 40/217 (18%)
Query: 91   AYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSR 150
            A IA+S +  + +W I S   +A    H   +  V +S D +  +T  +D TI VW+ ++
Sbjct: 862  AVIALS-QYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWE-TK 919
Query: 151  LICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCK 210
             +CK +               L + + V  Q +             ++ V +V + R  +
Sbjct: 920  KVCKNSAIV------------LKQEIDVVFQEN-------------ETMVLAVDNIRGLQ 954
Query: 211  IFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDST 270
            +    TG+  +  + + +++C       + +  G  +G IK   + ++P  R        
Sbjct: 955  LIAGKTGQ--IDYLPEAQVSCCCLSPHLEYVAFGDEDGAIK---IIELPNNR-------- 1001
Query: 271  SNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWH 307
                 +GH+K V  +  +  G TL+SSS D  +++W+
Sbjct: 1002 VFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWN 1038

>pdb|3SFZ|A Chain A, Crystal Structure Of Full-Length Murine Apaf-1 Length = 1249

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 47/217 (21%), Positives = 93/217 (42%), Gaps = 40/217 (18%)
Query: 91   AYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSR 150
            A IA+S +  + +W I S   +A    H   +  V +S D +  +T  +D TI VW+ ++
Sbjct: 855  AVIALS-QYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWE-TK 912
Query: 151  LICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCK 210
             +CK +               L + + V  Q +             ++ V +V + R  +
Sbjct: 913  KVCKNSAIV------------LKQEIDVVFQEN-------------ETMVLAVDNIRGLQ 947
Query: 211  IFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDST 270
            +    TG+  +  + + +++C       + +  G  +G IK   + ++P  R        
Sbjct: 948  LIAGKTGQ--IDYLPEAQVSCCCLSPHLEYVAFGDEDGAIK---IIELPNNR-------- 994
Query: 271  SNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWH 307
                 +GH+K V  +  +  G TL+SSS D  +++W+
Sbjct: 995  VFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWN 1031

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	343
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	100.0
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	100.0
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	100.0
3ow8_A	321	WD repeat-containing protein 61; structural genomi	100.0
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	100.0
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	100.0
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	100.0
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	100.0
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	100.0
3ow8_A	321	WD repeat-containing protein 61; structural genomi	100.0
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	100.0
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	100.0
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	100.0
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	100.0
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	100.0
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	100.0
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	100.0
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	100.0
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	100.0
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	100.0
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	100.0
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	100.0
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	100.0
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	100.0
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	100.0
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	100.0
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	100.0
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	100.0
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	100.0
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	100.0
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	100.0
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	100.0
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	100.0
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	100.0
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	100.0
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	100.0
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	100.0
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	100.0
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	100.0
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	100.0
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	100.0
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	100.0
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	100.0
3v7d_B	464	Cell division control protein 4; WD 40 domain, pho	100.0
2pm7_B	297	Protein transport protein SEC13, protein transport	100.0
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	100.0
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	100.0
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	100.0
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	100.0
2ovr_B	445	FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40	100.0
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	100.0
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	100.0
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	100.0
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	100.0
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	100.0
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	100.0
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	100.0
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	100.0
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	100.0
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	100.0
2j04_B	524	YDR362CP, TAU91; beta propeller, type 2 promoters,	100.0
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	100.0
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	100.0
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	100.0
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	100.0
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	100.0
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	100.0
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	100.0
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	100.0
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	100.0
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	100.0
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	100.0
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	100.0
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	100.0
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	100.0
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	100.0
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	100.0
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	100.0
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	100.0
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	100.0
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	100.0
3jrp_A	379	Fusion protein of protein transport protein SEC13	100.0
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	100.0
1p22_A	435	F-BOX/WD-repeat protein 1A; ubiquitination, degrad	100.0
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	100.0
2pm7_B	297	Protein transport protein SEC13, protein transport	100.0
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	100.0
3v7d_B	464	Cell division control protein 4; WD 40 domain, pho	100.0
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	100.0
2j04_B	524	YDR362CP, TAU91; beta propeller, type 2 promoters,	100.0
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	100.0
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	100.0
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	100.0
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	100.0
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	100.0
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	100.0
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	100.0
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	100.0
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	100.0
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	100.0
3jro_A	753	Fusion protein of protein transport protein SEC13	100.0
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	100.0
1p22_A	435	F-BOX/WD-repeat protein 1A; ubiquitination, degrad	100.0
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	100.0
2j04_A	588	TAU60, YPL007P, hypothetical protein YPL007C; beta	100.0
2ovr_B	445	FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40	100.0
3jrp_A	379	Fusion protein of protein transport protein SEC13	100.0
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	100.0
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	100.0
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	100.0
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	100.0
2j04_A	588	TAU60, YPL007P, hypothetical protein YPL007C; beta	100.0
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	100.0
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	100.0
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	100.0
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	100.0
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	100.0
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	100.0
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	100.0
3jro_A	753	Fusion protein of protein transport protein SEC13	100.0
2w18_A	356	PALB2, fancn, partner and localizer of BRCA2; fanc	100.0
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	100.0
2hqs_A	415	Protein TOLB; TOLB, PAL, TOL, transport protein-li	100.0
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	100.0
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	100.0
1nir_A	543	Nitrite reductase; hemoprotein, denitrification, d	100.0
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	100.0
3u4y_A	331	Uncharacterized protein; structural genomics, PSI-	100.0
2w18_A	356	PALB2, fancn, partner and localizer of BRCA2; fanc	100.0
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	100.0
2hqs_A	415	Protein TOLB; TOLB, PAL, TOL, transport protein-li	100.0
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	100.0
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	100.0
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	99.98
1nir_A	543	Nitrite reductase; hemoprotein, denitrification, d	99.97
2ojh_A	297	Uncharacterized protein ATU1656/AGR_C_3050; TOLB,	99.97
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	99.97
2ojh_A	297	Uncharacterized protein ATU1656/AGR_C_3050; TOLB,	99.97
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	99.97
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	99.97
1k32_A	1045	Tricorn protease; protein degradation, substrate g	99.97
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	99.97
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	99.97
1k32_A	1045	Tricorn protease; protein degradation, substrate g	99.96
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	99.96
3u4y_A	331	Uncharacterized protein; structural genomics, PSI-	99.96
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	99.96
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	99.96
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	99.96
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	99.96
3o4h_A	582	Acylamino-acid-releasing enzyme; alpha/beta hydrol	99.95
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	99.95
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	99.95
3pe7_A	388	Oligogalacturonate lyase; seven-bladed beta-propel	99.95
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	99.95
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	99.95
3o4h_A	582	Acylamino-acid-releasing enzyme; alpha/beta hydrol	99.94
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	99.94
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	99.94
2oiz_A	361	Aromatic amine dehydrogenase, large subunit; oxido	99.94
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	99.93
4a5s_A	740	Dipeptidyl peptidase 4 soluble form; hydrolase, ty	99.93
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	99.93
1jof_A	365	Carboxy-CIS,CIS-muconate cyclase; beta-propeller,	99.92
3c5m_A	396	Oligogalacturonate lyase; blade-shaped beta-propel	99.92
4a5s_A	740	Dipeptidyl peptidase 4 soluble form; hydrolase, ty	99.92
3pe7_A	388	Oligogalacturonate lyase; seven-bladed beta-propel	99.91
3dsm_A	328	Uncharacterized protein bacuni_02894; seven_blated	99.9
1jof_A	365	Carboxy-CIS,CIS-muconate cyclase; beta-propeller,	99.9
3azo_A	662	Aminopeptidase; POP family, hydrolase; 2.00A {Stre	99.9
1q7f_A	286	NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL	99.9
3fvz_A	329	Peptidyl-glycine alpha-amidating monooxygenase; be	99.89
2dg1_A	333	DRP35, lactonase; beta propeller, hydrolase; 1.72A	99.88
3c5m_A	396	Oligogalacturonate lyase; blade-shaped beta-propel	99.88
1qks_A	567	Cytochrome CD1 nitrite reductase; enzyme, oxidored	99.88
3azo_A	662	Aminopeptidase; POP family, hydrolase; 2.00A {Stre	99.88
2dg1_A	333	DRP35, lactonase; beta propeller, hydrolase; 1.72A	99.88
2gop_A	347	Trilobed protease; beta propeller, open velcro, hy	99.87
2oiz_A	361	Aromatic amine dehydrogenase, large subunit; oxido	99.86
3fvz_A	329	Peptidyl-glycine alpha-amidating monooxygenase; be	99.86
2gop_A	347	Trilobed protease; beta propeller, open velcro, hy	99.86
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	99.86
1q7f_A	286	NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL	99.85
1rwi_B	270	Serine/threonine-protein kinase PKND; beta propell	99.85
3e5z_A	296	Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco	99.84
3e5z_A	296	Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco	99.84
2z2n_A	299	Virginiamycin B lyase; seven-bladed beta-propeller	99.84
2mad_H	373	Methylamine dehydrogenase (heavy subunit); oxidore	99.83
2xdw_A	710	Prolyl endopeptidase; alpha/beta-hydrolase, amnesi	99.83
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	99.83
2xdw_A	710	Prolyl endopeptidase; alpha/beta-hydrolase, amnesi	99.83
3sjl_D	386	Methylamine dehydrogenase heavy chain; MAUG, C-hem	99.82
2bkl_A	695	Prolyl endopeptidase; mechanistic study, celiac sp	99.82
3dsm_A	328	Uncharacterized protein bacuni_02894; seven_blated	99.82
1qks_A	567	Cytochrome CD1 nitrite reductase; enzyme, oxidored	99.82
2z2n_A	299	Virginiamycin B lyase; seven-bladed beta-propeller	99.81
1rwi_B	270	Serine/threonine-protein kinase PKND; beta propell	99.79
1pjx_A	314	Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries	99.79
2qc5_A	300	Streptogramin B lactonase; beta propeller, lyase;	99.78
2bkl_A	695	Prolyl endopeptidase; mechanistic study, celiac sp	99.78
2mad_H	373	Methylamine dehydrogenase (heavy subunit); oxidore	99.78
1pjx_A	314	Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries	99.77
3c75_H	426	MADH, methylamine dehydrogenase heavy chain; coppe	99.76
2qc5_A	300	Streptogramin B lactonase; beta propeller, lyase;	99.75
3g4e_A	297	Regucalcin; six bladed beta-propeller, gluconolcat	99.74
3hrp_A	409	Uncharacterized protein; NP_812590.1, structural g	99.74
1yr2_A	741	Prolyl oligopeptidase; prolyl endopeptidase, mecha	99.73
1xip_A	388	Nucleoporin NUP159; beta-propeller, transport prot	99.72
3sjl_D	386	Methylamine dehydrogenase heavy chain; MAUG, C-hem	99.72
3g4e_A	297	Regucalcin; six bladed beta-propeller, gluconolcat	99.71
1yr2_A	741	Prolyl oligopeptidase; prolyl endopeptidase, mecha	99.71
2qe8_A	343	Uncharacterized protein; structural genomics, join	99.71
1mda_H	368	Methylamine dehydrogenase (heavy subunit); electro	99.7
1yiq_A	689	Quinohemoprotein alcohol dehydrogenase; electron t	99.7
3c75_H	426	MADH, methylamine dehydrogenase heavy chain; coppe	99.69
3hrp_A	409	Uncharacterized protein; NP_812590.1, structural g	99.68
3dr2_A	305	Exported gluconolactonase; gluconolactonase SMP-30	99.68
1kb0_A	677	Quinohemoprotein alcohol dehydrogenase; beta-prope	99.67
2ghs_A	326	AGR_C_1268P; regucalcin, structural genomics, join	99.67
2ghs_A	326	AGR_C_1268P; regucalcin, structural genomics, join	99.66
1xip_A	388	Nucleoporin NUP159; beta-propeller, transport prot	99.65
3dr2_A	305	Exported gluconolactonase; gluconolactonase SMP-30	99.63
3q7m_A	376	Lipoprotein YFGL, BAMB; beta-propeller, BAM comple	99.62
3iuj_A	693	Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas	99.61
1fwx_A	595	Nitrous oxide reductase; beta-propeller domain, cu	99.6
2ece_A	462	462AA long hypothetical selenium-binding protein;	99.6
1mda_H	368	Methylamine dehydrogenase (heavy subunit); electro	99.59
3hxj_A	330	Pyrrolo-quinoline quinone; all beta protein. incom	99.59
3iuj_A	693	Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas	99.55
1kb0_A	677	Quinohemoprotein alcohol dehydrogenase; beta-prope	99.53
1yiq_A	689	Quinohemoprotein alcohol dehydrogenase; electron t	99.52
2ece_A	462	462AA long hypothetical selenium-binding protein;	99.52
2hz6_A	369	Endoplasmic reticulum to nucleus signalling 1 isof	99.5
2hz6_A	369	Endoplasmic reticulum to nucleus signalling 1 isof	99.48
2iwa_A	266	Glutamine cyclotransferase; pyroglutamate, acyltra	99.48
2qe8_A	343	Uncharacterized protein; structural genomics, join	99.47
1kv9_A	668	Type II quinohemoprotein alcohol dehydrogenase; el	99.47
1npe_A	267	Nidogen, entactin; glycoprotein, basement membrane	99.46
3q7m_A	376	Lipoprotein YFGL, BAMB; beta-propeller, BAM comple	99.45
2ad6_A	571	Methanol dehydrogenase subunit 1; PQQ configuratio	99.43
4a2l_A	795	BT_4663, two-component system sensor histidine kin	99.43
1npe_A	267	Nidogen, entactin; glycoprotein, basement membrane	99.4
1fwx_A	595	Nitrous oxide reductase; beta-propeller domain, cu	99.4
3hxj_A	330	Pyrrolo-quinoline quinone; all beta protein. incom	99.39
1w6s_A	599	Methanol dehydrogenase subunit 1; anisotropic, ele	99.39
4a2l_A	795	BT_4663, two-component system sensor histidine kin	99.38
3nok_A	268	Glutaminyl cyclase; beta-propeller, cyclotransfera	99.37
2iwa_A	266	Glutamine cyclotransferase; pyroglutamate, acyltra	99.36
1flg_A	582	Protein (quinoprotein ethanol dehydrogenase); supe	99.36
3nol_A	262	Glutamine cyclotransferase; beta-propeller, glutam	99.36
3nol_A	262	Glutamine cyclotransferase; beta-propeller, glutam	99.32
2fp8_A	322	Strictosidine synthase; six bladed beta propeller	99.28
2p4o_A	306	Hypothetical protein; putative lactonase, structur	99.28
3nok_A	268	Glutaminyl cyclase; beta-propeller, cyclotransfera	99.26
3mbr_X	243	Glutamine cyclotransferase; beta-propeller; 1.44A	99.25
3v9f_A	781	Two-component system sensor histidine kinase/RESP	99.25
1kv9_A	668	Type II quinohemoprotein alcohol dehydrogenase; el	99.22
2p4o_A	306	Hypothetical protein; putative lactonase, structur	99.22
3v9f_A	781	Two-component system sensor histidine kinase/RESP	99.21
3mbr_X	243	Glutamine cyclotransferase; beta-propeller; 1.44A	99.2
2ad6_A	571	Methanol dehydrogenase subunit 1; PQQ configuratio	99.18
2fp8_A	322	Strictosidine synthase; six bladed beta propeller	99.17
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	99.14
3v65_B	386	Low-density lipoprotein receptor-related protein;	99.13
1k3i_A	656	Galactose oxidase precursor; blade beta propeller,	99.07
1w6s_A	599	Methanol dehydrogenase subunit 1; anisotropic, ele	99.05
1flg_A	582	Protein (quinoprotein ethanol dehydrogenase); supe	99.01
3qqz_A	255	Putative uncharacterized protein YJIK; MCSG, PSI-2	99.0
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	98.99
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	98.98
4hw6_A	433	Hypothetical protein, IPT/TIG domain protein; puta	98.9
3amr_A	355	3-phytase; beta-propeller, phytate, MYO-inositol h	98.9
3tc9_A	430	Hypothetical hydrolase; 6-bladed beta-propeller, i	98.88
3v65_B	386	Low-density lipoprotein receptor-related protein;	98.87
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	98.87
1k3i_A	656	Galactose oxidase precursor; blade beta propeller,	98.86
3tc9_A	430	Hypothetical hydrolase; 6-bladed beta-propeller, i	98.84
3qqz_A	255	Putative uncharacterized protein YJIK; MCSG, PSI-2	98.83
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	98.82
4hw6_A	433	Hypothetical protein, IPT/TIG domain protein; puta	98.79
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	98.79
2xe4_A	751	Oligopeptidase B; hydrolase-inhibitor complex, hyd	98.77
2ism_A	352	Putative oxidoreductase; BL41XU spring-8, bladed b	98.72
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	98.71
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	98.71
2xe4_A	751	Oligopeptidase B; hydrolase-inhibitor complex, hyd	98.71
2xzh_A	365	Clathrin heavy chain 1; endocytosis, endocytosis i	98.69
2xbg_A	327	YCF48-like protein; photosynthesis, photosystem II	98.67
2ism_A	352	Putative oxidoreductase; BL41XU spring-8, bladed b	98.62
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	98.61
3amr_A	355	3-phytase; beta-propeller, phytate, MYO-inositol h	98.6
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	98.6
3kya_A	496	Putative phosphatase; structural genomics, joint c	98.59
2xbg_A	327	YCF48-like protein; photosynthesis, photosystem II	98.57
1bpo_A	494	Protein (clathrin); clathrin endocytosis beta-prop	98.56
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	98.56
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	98.55
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	98.52
3sre_A	355	PON1, serum paraoxonase; directed evolution, 6-bla	98.52
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	98.48
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	98.46
2xzh_A	365	Clathrin heavy chain 1; endocytosis, endocytosis i	98.45
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	98.45
3kya_A	496	Putative phosphatase; structural genomics, joint c	98.42
2p9w_A	334	MAL S 1 allergenic protein; beta propeller; 1.35A	98.42
3a9g_A	354	Putative uncharacterized protein; PQQ dependent de	98.38
1bpo_A	494	Protein (clathrin); clathrin endocytosis beta-prop	98.33
3a9g_A	354	Putative uncharacterized protein; PQQ dependent de	98.28
2p9w_A	334	MAL S 1 allergenic protein; beta propeller; 1.35A	98.25
3sbq_A	638	Nitrous-oxide reductase; beta-propeller, cupredoxi	98.15
2g8s_A	353	Glucose/sorbosone dehydrogenases; bladed beta-prop	98.07
1xi4_A	1630	Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle	98.03
3pbp_A	452	Nucleoporin NUP82; beta-propeller, mRNA export, mR	98.03
2vpj_A	301	Kelch-like protein 12; adaptor protein, WNT signal	98.0
2g8s_A	353	Glucose/sorbosone dehydrogenases; bladed beta-prop	97.98
3sre_A	355	PON1, serum paraoxonase; directed evolution, 6-bla	97.97
2be1_A	339	Serine/threonine-protein kinase/endoribonuclease;	97.95
3ei3_A	1158	DNA damage-binding protein 1; UV-damage, DDB, nucl	97.92
2vpj_A	301	Kelch-like protein 12; adaptor protein, WNT signal	97.87
3pbp_A	452	Nucleoporin NUP82; beta-propeller, mRNA export, mR	97.85
3ii7_A	306	Kelch-like protein 7; protein-binding, kelch-repea	97.83
1tl2_A	236	L10, protein (tachylectin-2); animal lectin, horse	97.79
3das_A	347	Putative oxidoreductase; aldose sugar dehydrogenas	97.69
3das_A	347	Putative oxidoreductase; aldose sugar dehydrogenas	97.69
2xn4_A	302	Kelch-like protein 2; structural protein, cytoskel	97.68
1xi4_A	1630	Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle	97.65
2xn4_A	302	Kelch-like protein 2; structural protein, cytoskel	97.65
3ei3_A	1158	DNA damage-binding protein 1; UV-damage, DDB, nucl	97.64
3ii7_A	306	Kelch-like protein 7; protein-binding, kelch-repea	97.63
1zgk_A	308	Kelch-like ECH-associated protein 1; beta-propelle	97.6
2be1_A	339	Serine/threonine-protein kinase/endoribonuclease;	97.56
1cru_A	454	Protein (soluble quinoprotein glucose dehydrogena;	97.54
1zgk_A	308	Kelch-like ECH-associated protein 1; beta-propelle	97.47
1tl2_A	236	L10, protein (tachylectin-2); animal lectin, horse	97.37
4asc_A	315	Kelch repeat and BTB domain-containing protein 5;	97.22
4asc_A	315	Kelch repeat and BTB domain-containing protein 5;	97.22
3ott_A	758	Two-component system sensor histidine kinase; beta	97.18
1cru_A	454	Protein (soluble quinoprotein glucose dehydrogena;	96.99
2uvk_A	357	YJHT; unknown function, hypothetical protein, sial	96.97
3sbq_A	638	Nitrous-oxide reductase; beta-propeller, cupredoxi	96.95
2uvk_A	357	YJHT; unknown function, hypothetical protein, sial	96.91
3ott_A	758	Two-component system sensor histidine kinase; beta	96.83
3s25_A	302	Hypothetical 7-bladed beta-propeller-like protein;	96.83
3s25_A	302	Hypothetical 7-bladed beta-propeller-like protein;	96.81
2woz_A	318	Kelch repeat and BTB domain-containing protein 10;	96.55
2woz_A	318	Kelch repeat and BTB domain-containing protein 10;	96.54
2zwa_A	695	Leucine carboxyl methyltransferase 2; HET: SAH CIT	95.93
3qhy_B	282	Beta-lactamase inhibitory protein II; enyzme-inhib	95.92
2zwa_A	695	Leucine carboxyl methyltransferase 2; HET: SAH CIT	95.82
3qhy_B	282	Beta-lactamase inhibitory protein II; enyzme-inhib	95.7
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	95.47
3no0_A	276	DNA gyrase subunit A; DNA topology, topoisomerase,	95.43
3b7f_A	394	Glycosyl hydrolase, BNR repeat; 7-bladed beta-prop	94.81
3q6k_A	381	43.2 kDa salivary protein; beta propeller, binding	92.2
3zwu_A	592	Alkaline phosphatase PHOX; hydrolase, beta-propell	91.86
3q6k_A	381	43.2 kDa salivary protein; beta propeller, binding	91.06
4a9v_A	592	PHOX; hydrolase, beta-propeller; 1.10A {Pseudomona	90.69
4hvt_A	711	Ritya.17583.B, post-proline cleaving enzyme; ssgci	90.34
4gq2_M	950	Nucleoporin NUP120; beta propeller alpha helical,	90.05
1wp5_A	323	Topoisomerase IV; broken beta-propeller, hairpin-i	89.32
1suu_A	312	DNA gyrase subunit A; topoisomerase,DNA gyrase, be	88.06
3f7f_A	729	Nucleoporin NUP120; nuclear pore complex, macromol	87.75
4gq2_M	950	Nucleoporin NUP120; beta propeller alpha helical,	87.58
3b7f_A	394	Glycosyl hydrolase, BNR repeat; 7-bladed beta-prop	87.22
3uc1_A	327	DNA gyrase subunit A; DNA binding protein, topoiso	87.04
1wp5_A	323	Topoisomerase IV; broken beta-propeller, hairpin-i	84.83
4fhn_B	1139	Nucleoporin NUP120; protein complex,structural pro	84.19
1suu_A	312	DNA gyrase subunit A; topoisomerase,DNA gyrase, be	83.28
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	83.27
3uc1_A	327	DNA gyrase subunit A; DNA binding protein, topoiso	83.25
4fhn_B	1139	Nucleoporin NUP120; protein complex,structural pro	82.78
1zi0_A	307	DNA gyrase subunit A; beta pinwheel, topoisomerase	82.01
3f7f_A	729	Nucleoporin NUP120; nuclear pore complex, macromol	81.81
3l6v_A	370	GYRA, DNA gyrase subunit A; gyrase A C-terminal do	80.57

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=100.00  E-value=8e-52  Score=335.13  Aligned_cols=279  Identities=15%  Similarity=0.161  Sum_probs=250.1

Q ss_pred             eEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-ecCCeEEEE
Q psy10867         26 TLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SIETKLHMW  104 (343)
Q Consensus        26 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~  104 (343)
                      +..+++++|.+ .|.+++|+|++.++++++.||.|++||+.+++.+..+..|..+|.+++|+|++++|++ +.|+.|++|
T Consensus         4 ~~~~~~~~h~~-~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vw   82 (304)
T 2ynn_A            4 DIKKTFSNRSD-RVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVF   82 (304)
T ss_dssp             CCEEEEEEECS-CEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEE
T ss_pred             eeEEeecCCCC-ceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEE
Confidence            45678999999 9999999999999999999999999999999888888899999999999999999987 689999999


Q ss_pred             EccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeeccccc
Q psy10867        105 QISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSL  184 (343)
Q Consensus       105 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (343)
                      |+.+++.+..+.+|.+.|.+++|+|++++|++|+.|+.|++||++++..                     ....+.+|..
T Consensus        83 d~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~---------------------~~~~~~~h~~  141 (304)
T 2ynn_A           83 NYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWA---------------------LEQTFEGHEH  141 (304)
T ss_dssp             ETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTE---------------------EEEEECCCCS
T ss_pred             ECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcc---------------------hhhhhcccCC
Confidence            9999999999999999999999999999999999999999999987532                     4456678999


Q ss_pred             ceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee--cCCcEEEEEEcC--CCCEEEEEcCCCcEEEEEeecccc
Q psy10867        185 PVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI--LDTRLTCVAFDG--TEDNIYMGTSEGVIKSFCLRQVPR  260 (343)
Q Consensus       185 ~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~--~~~~i~~~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~  260 (343)
                      .|.+++|+|.+. .+|++++.|++|++||+++++....+.  +...+..+.|+|  ++++|++|+.|+.|++||+++...
T Consensus       142 ~v~~v~~~p~~~-~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~  220 (304)
T 2ynn_A          142 FVMCVAFNPKDP-STFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSC  220 (304)
T ss_dssp             CEEEEEECTTCT-TEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEE
T ss_pred             cEEEEEECCCCC-CEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCcc
Confidence            999999999432 799999999999999998887766654  456799999987  678999999999999999987543


Q ss_pred             cccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc-cCCceEEEEEccCCC--eeee
Q psy10867        261 TRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVLGAFLGLLPP--AIHD  337 (343)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~--~l~~  337 (343)
                                 +..+.+|...|.+++|+|++++|++|+.||.|++||+.+++++.++. +...+.+++|+|++.  ++++
T Consensus       221 -----------~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~as  289 (304)
T 2ynn_A          221 -----------VATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIAS  289 (304)
T ss_dssp             -----------EEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEE
T ss_pred             -----------ceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeeccCCCccEEEEEECCCCCceEEEE
Confidence                       55678999999999999999999999999999999999999999998 888999999999986  3555


Q ss_pred             c
Q psy10867        338 Y  338 (343)
Q Consensus       338 ~  338 (343)
                      +
T Consensus       290 g  290 (304)
T 2ynn_A          290 G  290 (304)
T ss_dssp             E
T ss_pred             e
Confidence            4

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=100.00  E-value=2.3e-51  Score=345.86  Aligned_cols=278  Identities=17%  Similarity=0.254  Sum_probs=256.6

Q ss_pred             EEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-ecCCeEEEEEc
Q psy10867         28 LMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQI  106 (343)
Q Consensus        28 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~  106 (343)
                      ...+.+|.. +|++++|+|++.++++++.||.|++||+.+++....+.+|.+.|.+++|+|++++|++ +.|+.|++||+
T Consensus       101 ~~~l~gh~~-~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~  179 (410)
T 1vyh_C          101 KYALSGHRS-PVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDF  179 (410)
T ss_dssp             SCEEECCSS-CEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEET
T ss_pred             eEeecccCC-cEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeC
Confidence            456788998 9999999999999999999999999999999988888899999999999999999987 68999999999


Q ss_pred             cCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccce
Q psy10867        107 SSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPV  186 (343)
Q Consensus       107 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  186 (343)
                      .+++++..+.+|...|.+++|+|++++|++|+.|+.|++||++++.                      .+..+.+|...|
T Consensus       180 ~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~----------------------~~~~~~~h~~~v  237 (410)
T 1vyh_C          180 QGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGY----------------------CVKTFTGHREWV  237 (410)
T ss_dssp             TSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCC----------------------EEEEEECCSSCE
T ss_pred             CCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCc----------------------EEEEEeCCCccE
Confidence            9999999999999999999999999999999999999999999864                      445567899999


Q ss_pred             EEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCC--------------------CCEEEEEc
Q psy10867        187 THVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGT--------------------EDNIYMGT  245 (343)
Q Consensus       187 ~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~--------------------~~~l~~~~  245 (343)
                      .++.++|++  .++++++.|+.|++||+++++....+. |...|.+++|+|+                    +.+|++|+
T Consensus       238 ~~~~~~~~g--~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs  315 (410)
T 1vyh_C          238 RMVRPNQDG--TLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGS  315 (410)
T ss_dssp             EEEEECTTS--SEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEE
T ss_pred             EEEEECCCC--CEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEe
Confidence            999999999  899999999999999999999888776 7888999999996                    67899999


Q ss_pred             CCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc-cCCceE
Q psy10867        246 SEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVL  324 (343)
Q Consensus       246 ~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~  324 (343)
                      .|+.|++||+++...           +..+.+|...|++++|+|++++|++++.||.|++||+.+++++..+. |...|+
T Consensus       316 ~D~~i~iwd~~~~~~-----------~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~  384 (410)
T 1vyh_C          316 RDKTIKMWDVSTGMC-----------LMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVT  384 (410)
T ss_dssp             TTSEEEEEETTTTEE-----------EEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEE
T ss_pred             CCCeEEEEECCCCce-----------EEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEE
Confidence            999999999987543           45677899999999999999999999999999999999999999998 999999


Q ss_pred             EEEEccCCCeeeecccC
Q psy10867        325 GAFLGLLPPAIHDYDFT  341 (343)
Q Consensus       325 ~~~~sp~~~~l~~~~~~  341 (343)
                      +++|+|++++|++++..
T Consensus       385 ~l~~~~~~~~l~sgs~D  401 (410)
T 1vyh_C          385 SLDFHKTAPYVVTGSVD  401 (410)
T ss_dssp             EEEECSSSSCEEEEETT
T ss_pred             EEEEcCCCCEEEEEeCC
Confidence            99999999999998754

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=100.00  E-value=4.7e-50  Score=354.39  Aligned_cols=297  Identities=15%  Similarity=0.174  Sum_probs=239.4

Q ss_pred             ecCCCCcceEEEEeCCce-EEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCC
Q psy10867         32 KGASVLSPHSMCLLGNDY-VLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQISSG  109 (343)
Q Consensus        32 ~~~~~~~v~~~~~~~~~~-~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~  109 (343)
                      .+|.. .|.+++|+|++. .+++++.|++|++||..+++....+.+|...|.+++|+|++++|++ +.|++|++||+.++
T Consensus       144 ~gh~~-~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g  222 (611)
T 1nr0_A          144 TGQAR-AMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDG  222 (611)
T ss_dssp             CCCSS-CEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC
T ss_pred             cCCCC-CceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCC
Confidence            34555 666777777664 5777777899999999888888888899999999999999999997 78999999999999


Q ss_pred             ceEEEec-------ccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCC--------CCc------
Q psy10867        110 RLLATAS-------SHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSS--------GKG------  168 (343)
Q Consensus       110 ~~~~~~~-------~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~--------~~~------  168 (343)
                      +.+..+.       +|.+.|.+++|+|++++|++++.|++|++||+++++....+........        +..      
T Consensus       223 ~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~  302 (611)
T 1nr0_A          223 TKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISA  302 (611)
T ss_dssp             CEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEET
T ss_pred             cEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeC
Confidence            9888884       7999999999999999999999999999999998877666542210000        000      


Q ss_pred             -------cccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEe------------------
Q psy10867        169 -------VTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSL------------------  223 (343)
Q Consensus       169 -------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~------------------  223 (343)
                             .....+....+.+|...|.+++|+|++  ++|++++.|++|++||+.+++....+                  
T Consensus       303 d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg--~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~  380 (611)
T 1nr0_A          303 NGFINFVNPELGSIDQVRYGHNKAITALSSSADG--KTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGD  380 (611)
T ss_dssp             TCCEEEEETTTTEEEEEECCCSSCEEEEEECTTS--SEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSC
T ss_pred             CCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCC--CEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCc
Confidence                   001112456677899999999999999  89999999999999998876432211                  


Q ss_pred             -----------------------------------------------------------------ecCCcEEEEEEcCCC
Q psy10867        224 -----------------------------------------------------------------ILDTRLTCVAFDGTE  238 (343)
Q Consensus       224 -----------------------------------------------------------------~~~~~i~~~~~~~~~  238 (343)
                                                                                       .+...+.+++|+|++
T Consensus       381 l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg  460 (611)
T 1nr0_A          381 LFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDK  460 (611)
T ss_dssp             EEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTS
T ss_pred             EEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCCC
Confidence                                                                             112346789999999


Q ss_pred             CEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEeccc-ceeeee-
Q psy10867        239 DNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTIS-RQCLRT-  316 (343)
Q Consensus       239 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~-~~~~~~-  316 (343)
                      ++|++|+.|+.|++||+.......         ... .+|...|++++|+|++++|++++.|+.|++||+.+ ++++.. 
T Consensus       461 ~~lasgs~D~~v~lwd~~~~~~~~---------~~~-~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~~~  530 (611)
T 1nr0_A          461 QFVAVGGQDSKVHVYKLSGASVSE---------VKT-IVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTN  530 (611)
T ss_dssp             CEEEEEETTSEEEEEEEETTEEEE---------EEE-EECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCC
T ss_pred             CEEEEeCCCCeEEEEEccCCceee---------eec-cCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCCCceeeee
Confidence            999999999999999997642110         122 57899999999999999999999999999999988 666654 


Q ss_pred             -cc-cCCceEEEEEccCCCeeeecccC
Q psy10867        317 -IQ-HKGPVLGAFLGLLPPAIHDYDFT  341 (343)
Q Consensus       317 -~~-~~~~v~~~~~sp~~~~l~~~~~~  341 (343)
                       +. |...|.+++|+|||++|++++..
T Consensus       531 ~~~~H~~~V~~v~fspdg~~lasgs~D  557 (611)
T 1nr0_A          531 SWTFHTAKVACVSWSPDNVRLATGSLD  557 (611)
T ss_dssp             CCCCCSSCEEEEEECTTSSEEEEEETT
T ss_pred             eeeecccceeEEEECCCCCEEEEEECC
Confidence             34 89999999999999999998764

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=100.00  E-value=1.1e-50  Score=330.47  Aligned_cols=281  Identities=17%  Similarity=0.239  Sum_probs=251.3

Q ss_pred             ceEEEEEecCCCCcceEEEEeCC----ceEEEEEcCCCeEEEEeCCCcccc--eecccCCcceEEEEECCCCCEEEE-ec
Q psy10867         25 GTLLMSYKGASVLSPHSMCLLGN----DYVLGVEKGKPMIQAWPVNSQEKA--QLRLICPGRISSMQASPDAAYIAV-SI   97 (343)
Q Consensus        25 ~~~~~~~~~~~~~~v~~~~~~~~----~~~~~~~~~~~~i~iw~~~~~~~~--~~~~~~~~~v~~~~~s~~~~~l~~-~~   97 (343)
                      +...+.+++|.+ .|.+++|+|+    +.++++|+.|++|++|++..++..  ..+.+|...|.+++|+|++.++++ +.
T Consensus        22 g~~~~~~~~H~~-~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~  100 (321)
T 3ow8_A           22 GILFKQEQAHDD-AIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSL  100 (321)
T ss_dssp             EEEEEETTSSSS-CEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEET
T ss_pred             hheeeecccCCC-cEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeC
Confidence            455667789999 9999999975    568899998899999998776543  456799999999999999999997 68


Q ss_pred             CCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceee
Q psy10867         98 ETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLH  177 (343)
Q Consensus        98 d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (343)
                      |+.|++||+.+++.+..+..|...+.+++|+|++++|++++.||.|++|+++++.                      ...
T Consensus       101 D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~----------------------~~~  158 (321)
T 3ow8_A          101 DAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGK----------------------KEY  158 (321)
T ss_dssp             TSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCS----------------------EEE
T ss_pred             CCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCc----------------------eeE
Confidence            9999999999999999999999999999999999999999999999999998864                      344


Q ss_pred             eecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEee
Q psy10867        178 VKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLR  256 (343)
Q Consensus       178 ~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~  256 (343)
                      .+..|...|.+++|+|++  ++|++++.|+.|++||+++++.+..+. +..+|.+++|+|++++|++|+.|+.|++||++
T Consensus       159 ~~~~~~~~v~~~~~spdg--~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~  236 (321)
T 3ow8_A          159 SLDTRGKFILSIAYSPDG--KYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQ  236 (321)
T ss_dssp             EEECSSSCEEEEEECTTS--SEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETT
T ss_pred             EecCCCceEEEEEECCCC--CEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECC
Confidence            456788899999999999  899999999999999999999988887 67889999999999999999999999999998


Q ss_pred             cccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc-cCCceEEEEEccCCCee
Q psy10867        257 QVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVLGAFLGLLPPAI  335 (343)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~l  335 (343)
                      ....           ...+.+|...|.+++|+|++++|++++.|+.|++||+.+++++.++. |.+.|.+++|+|++++|
T Consensus       237 ~~~~-----------~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l  305 (321)
T 3ow8_A          237 HANL-----------AGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKI  305 (321)
T ss_dssp             TCCE-----------EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEE
T ss_pred             Ccce-----------eEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEE
Confidence            6433           44677899999999999999999999999999999999999999998 99999999999999999


Q ss_pred             eecccC
Q psy10867        336 HDYDFT  341 (343)
Q Consensus       336 ~~~~~~  341 (343)
                      ++++..
T Consensus       306 ~s~~~d  311 (321)
T 3ow8_A          306 VSVGDD  311 (321)
T ss_dssp             EEEETT
T ss_pred             EEEeCC
Confidence            998754

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=100.00  E-value=2.1e-51  Score=339.60  Aligned_cols=297  Identities=17%  Similarity=0.172  Sum_probs=231.3

Q ss_pred             eEEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcC------CCeEEEEeCCCcccc----eecc
Q psy10867          6 EVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKG------KPMIQAWPVNSQEKA----QLRL   75 (343)
Q Consensus         6 ~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~------~~~i~iw~~~~~~~~----~~~~   75 (343)
                      .+.+.++++.....|++....    ...|+. .|.+++|+|||++|++++.      |+.+++|+..++...    ....
T Consensus        17 ~~~~~~~g~~~~~~w~~p~~~----p~~H~~-~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~   91 (357)
T 4g56_B           17 NLYFQSNGSSKGSAWGRPVTA----PACMEV-QIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGV   91 (357)
T ss_dssp             ---------------------------CCCS-EEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEE
T ss_pred             ceEEecCCCccccccCCCCCC----cccccC-CEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccC
Confidence            456777778888999875433    357888 9999999999999999987      678999998776543    2234


Q ss_pred             cCCcceEEEEECCCCCEEEEecCCeEEEEEccCCceEE----EecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCcc
Q psy10867         76 ICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLA----TASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRL  151 (343)
Q Consensus        76 ~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~----~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~  151 (343)
                      .|...|.+++|+|++++++++.|+.|++||+.+++...    ...+|.+.|.+++|+|++++|++|+.|+.|++||++++
T Consensus        92 ~~~~~V~~~~~s~d~~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~  171 (357)
T 4g56_B           92 QTEAGVTDVAWVSEKGILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQK  171 (357)
T ss_dssp             ECSSCEEEEEEETTTEEEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTT
T ss_pred             CCCCCEEEEEEcCCCCEEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCC
Confidence            68889999999999999999999999999998886543    34479999999999999999999999999999999986


Q ss_pred             ceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee---cCCc
Q psy10867        152 ICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI---LDTR  228 (343)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~---~~~~  228 (343)
                      +                      .+..+.+|...|++++|+|+++ .++++++.|+.|++||+++++....+.   +...
T Consensus       172 ~----------------------~~~~~~~h~~~v~~v~~s~~~~-~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~  228 (357)
T 4g56_B          172 A----------------------VLKSYNAHSSEVNCVAACPGKD-TIFLSCGEDGRILLWDTRKPKPATRIDFCASDTI  228 (357)
T ss_dssp             E----------------------EEEEECCCSSCEEEEEECTTCS-SCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSC
T ss_pred             c----------------------EEEEEcCCCCCEEEEEEccCCC-ceeeeeccCCceEEEECCCCceeeeeeecccccc
Confidence            4                      4556678999999999999874 588999999999999999988776554   4667


Q ss_pred             EEEEEEcCCC-CEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCC-CEEEEEeCCCcEEEE
Q psy10867        229 LTCVAFDGTE-DNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITG-ITLLSSSADETLKIW  306 (343)
Q Consensus       229 i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~s~~~dg~i~iw  306 (343)
                      +.+++|+|++ .+|++|+.|+.|++||+++...           +..+.+|...|++++|+|++ ++||+|+.|++|+||
T Consensus       229 v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~-----------~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iw  297 (357)
T 4g56_B          229 PTSVTWHPEKDDTFACGDETGNVSLVNIKNPDS-----------AQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVL  297 (357)
T ss_dssp             EEEEEECTTSTTEEEEEESSSCEEEEESSCGGG-----------CEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEE
T ss_pred             ccchhhhhcccceEEEeecccceeEEECCCCcE-----------eEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEE
Confidence            9999999974 6888999999999999987544           45677899999999999987 589999999999999


Q ss_pred             ecccceeeeecccCCceEEEEEcc-CCCeeeecccC
Q psy10867        307 HTISRQCLRTIQHKGPVLGAFLGL-LPPAIHDYDFT  341 (343)
Q Consensus       307 d~~~~~~~~~~~~~~~v~~~~~sp-~~~~l~~~~~~  341 (343)
                      |+++++++..+.|.+.|++++|+| ++++|++++..
T Consensus       298 d~~~~~~~~~~~H~~~V~~vafsP~d~~~l~s~s~D  333 (357)
T 4g56_B          298 DADFSEVFRDLSHRDFVTGVAWSPLDHSKFTTVGWD  333 (357)
T ss_dssp             CTTSCEEEEECCCSSCEEEEEECSSSTTEEEEEETT
T ss_pred             ECCCCcEeEECCCCCCEEEEEEeCCCCCEEEEEcCC
Confidence            999999998888999999999999 79999998764

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=100.00  E-value=6.6e-51  Score=343.06  Aligned_cols=270  Identities=21%  Similarity=0.305  Sum_probs=244.3

Q ss_pred             eEEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEE
Q psy10867          6 EVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQ   85 (343)
Q Consensus         6 ~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~   85 (343)
                      .++++++.||.|+|||+.+++....+++|.. .|.+++|+|++.++++++.|++|++||+.+++.+..+.+|...|.+++
T Consensus       121 ~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~-~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~  199 (410)
T 1vyh_C          121 SVMVSASEDATIKVWDYETGDFERTLKGHTD-SVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVS  199 (410)
T ss_dssp             SEEEEEESSSCEEEEETTTCCCCEEECCCSS-CEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEE
T ss_pred             CEEEEEeCCCeEEEEECCCCcEEEEEeccCC-cEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEE
Confidence            3444555589999999999999999999999 999999999999999999999999999999998888889999999999


Q ss_pred             ECCCCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCC
Q psy10867         86 ASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGS  164 (343)
Q Consensus        86 ~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~  164 (343)
                      |+|++.+|++ +.|+.|++||+.++.++..+.+|...|.++.|+|++++|++|+.|+.|++||+.+..            
T Consensus       200 ~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~------------  267 (410)
T 1vyh_C          200 IMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE------------  267 (410)
T ss_dssp             ECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC------------
T ss_pred             EeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCc------------
Confidence            9999998887 789999999999999999999999999999999999999999999999999998864            


Q ss_pred             CCCccccccceeeeecccccceEEEEeecCCC------------------ceEEEEeeCCCeEEEEecCCCceEEEee-c
Q psy10867        165 SGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGA------------------KSRVASVSHDRTCKIFDLCTGEDLLSLI-L  225 (343)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~------------------~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~  225 (343)
                                ....+.+|...|.+++|+|++.                  +.++++|+.|+.|++||+++++.+..+. |
T Consensus       268 ----------~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h  337 (410)
T 1vyh_C          268 ----------CKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGH  337 (410)
T ss_dssp             ----------EEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECC
T ss_pred             ----------eeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECC
Confidence                      4455678999999999999631                  2689999999999999999999988887 7


Q ss_pred             CCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEE
Q psy10867        226 DTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKI  305 (343)
Q Consensus       226 ~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~i  305 (343)
                      ...|.+++|+|++++|++|+.|+.|++||+.+...           +..+.+|...|++++|+|++.+|++|+.||.|++
T Consensus       338 ~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~-----------~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~v  406 (410)
T 1vyh_C          338 DNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRC-----------MKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV  406 (410)
T ss_dssp             SSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCC-----------CEEEECCSSCEEEEEECSSSSCEEEEETTSEEEE
T ss_pred             CCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCce-----------EEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEE
Confidence            78899999999999999999999999999876433           5567889999999999999999999999999999


Q ss_pred             Eecc
Q psy10867        306 WHTI  309 (343)
Q Consensus       306 wd~~  309 (343)
                      |+++
T Consensus       407 W~~r  410 (410)
T 1vyh_C          407 WECR  410 (410)
T ss_dssp             EC--
T ss_pred             EeCC
Confidence            9863

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=100.00  E-value=5.7e-50  Score=353.86  Aligned_cols=320  Identities=17%  Similarity=0.204  Sum_probs=255.4

Q ss_pred             EEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecc-------cCCcc
Q psy10867          8 AFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRL-------ICPGR   80 (343)
Q Consensus         8 ~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~-------~~~~~   80 (343)
                      +++++.|+.|++||..+++++..+.+|.. .|.+++|+|++.++++++.|++|++||+.+++....+.       +|.+.
T Consensus       163 l~s~s~D~~v~lwd~~~~~~~~~l~~H~~-~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~  241 (611)
T 1nr0_A          163 IISGSDDNTVAIFEGPPFKFKSTFGEHTK-FVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGS  241 (611)
T ss_dssp             EEEEETTSCEEEEETTTBEEEEEECCCSS-CEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSC
T ss_pred             EEEEeCCCeEEEEECCCCeEeeeeccccC-ceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCC
Confidence            44555589999999999999999999999 99999999999999999999999999999888776553       79999


Q ss_pred             eEEEEECCCCCEEEE-ecCCeEEEEEccCCceEE-------------------------------------------Eec
Q psy10867         81 ISSMQASPDAAYIAV-SIETKLHMWQISSGRLLA-------------------------------------------TAS  116 (343)
Q Consensus        81 v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~-------------------------------------------~~~  116 (343)
                      |.+++|+|++++|++ +.|++|++||+.+++.+.                                           .+.
T Consensus       242 V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~  321 (611)
T 1nr0_A          242 VFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRY  321 (611)
T ss_dssp             EEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEEC
T ss_pred             EEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEc
Confidence            999999999999997 789999999998776543                                           345


Q ss_pred             ccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCC--------CCC------------------Ccc-
Q psy10867        117 SHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPG--------SSG------------------KGV-  169 (343)
Q Consensus       117 ~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~--------~~~------------------~~~-  169 (343)
                      +|...|.+++|+|++++|++++.|+.|++||+.++.....+......        ..+                  ... 
T Consensus       322 gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~  401 (611)
T 1nr0_A          322 GHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVD  401 (611)
T ss_dssp             CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSC
T ss_pred             CCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCcccc
Confidence            78999999999999999999999999999999876543322100000        000                  000 


Q ss_pred             --------------------cc------c--------cceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecC
Q psy10867        170 --------------------TG------L--------TEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLC  215 (343)
Q Consensus       170 --------------------~~------~--------~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~  215 (343)
                                          ..      .        ...+..+ .|...+.+++|+|++  ++|++|+.|++|++||+.
T Consensus       402 ~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~-~~~~~v~~va~spdg--~~lasgs~D~~v~lwd~~  478 (611)
T 1nr0_A          402 SSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEV-PISYNSSCVALSNDK--QFVAVGGQDSKVHVYKLS  478 (611)
T ss_dssp             TTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEE-ECSSCEEEEEECTTS--CEEEEEETTSEEEEEEEE
T ss_pred             ccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeee-ecCCCceEEEEeCCC--CEEEEeCCCCeEEEEEcc
Confidence                                00      0        0001111 255678999999999  899999999999999998


Q ss_pred             CCce--EEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCE
Q psy10867        216 TGED--LLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGIT  293 (343)
Q Consensus       216 ~~~~--~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~  293 (343)
                      +++.  .....|...|.+++|+|++++|++++.|+.|++||+........        ...+.+|...|++++|+||+++
T Consensus       479 ~~~~~~~~~~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~--------~~~~~~H~~~V~~v~fspdg~~  550 (611)
T 1nr0_A          479 GASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAH--------TNSWTFHTAKVACVSWSPDNVR  550 (611)
T ss_dssp             TTEEEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESC--------CCCCCCCSSCEEEEEECTTSSE
T ss_pred             CCceeeeeccCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCCCceee--------eeeeeecccceeEEEECCCCCE
Confidence            7653  33445888999999999999999999999999999976221110        1123459999999999999999


Q ss_pred             EEEEeCCCcEEEEecccce-ee-eecc-c-CCceEEEEEccCCCeeeeccc
Q psy10867        294 LLSSSADETLKIWHTISRQ-CL-RTIQ-H-KGPVLGAFLGLLPPAIHDYDF  340 (343)
Q Consensus       294 l~s~~~dg~i~iwd~~~~~-~~-~~~~-~-~~~v~~~~~sp~~~~l~~~~~  340 (343)
                      ||+++.|++|++||+.+++ .+ ..+. | ...|.+++|+|+++ |++++.
T Consensus       551 lasgs~D~~v~lW~~~~~~~~~~~~~~~h~~~~v~~v~fs~d~~-l~s~~~  600 (611)
T 1nr0_A          551 LATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETT-IVSAGQ  600 (611)
T ss_dssp             EEEEETTSCEEEEETTCTTSCCEEETTSSTTSCEEEEEEEETTE-EEEEET
T ss_pred             EEEEECCCcEEEEECCCcccccchhhccCcccCeeEEEEcCCCE-EEEecC
Confidence            9999999999999998765 33 4555 7 79999999999999 888764

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=100.00  E-value=1.1e-49  Score=327.78  Aligned_cols=282  Identities=15%  Similarity=0.184  Sum_probs=251.1

Q ss_pred             ceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-ecCCeEEE
Q psy10867         25 GTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SIETKLHM  103 (343)
Q Consensus        25 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v  103 (343)
                      .+...++.+|.. .|.+++|+|++.++++++.||.|++||..+++.+..+..|...|.+++|+|++++|++ +.|+.|++
T Consensus        45 ~~~~~~l~gH~~-~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~i  123 (340)
T 1got_B           45 MRTRRTLRGHLA-KIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSI  123 (340)
T ss_dssp             CCEEEEECCCSS-CEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEE
T ss_pred             chhheeecCCCC-ceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEE
Confidence            456788999999 9999999999999999999999999999999888888889999999999999999997 68999999


Q ss_pred             EEccCC----ceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeee
Q psy10867        104 WQISSG----RLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVK  179 (343)
Q Consensus       104 ~~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (343)
                      |++.++    .....+.+|.+.|.++.|++++. +++++.|+.|++||++++.                      ....+
T Consensus       124 w~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~----------------------~~~~~  180 (340)
T 1got_B          124 YNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQ----------------------QTTTF  180 (340)
T ss_dssp             EETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTE----------------------EEEEE
T ss_pred             EECccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCc----------------------EEEEE
Confidence            999875    35567889999999999998765 8899999999999998864                      45566


Q ss_pred             cccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecc
Q psy10867        180 SQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQV  258 (343)
Q Consensus       180 ~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~  258 (343)
                      .+|...|.+++|+|++  .++++++.|+.|++||+++++....+. |...|.+++|+|++++|++|+.|+.|++||++..
T Consensus       181 ~~h~~~v~~~~~~~~~--~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~  258 (340)
T 1got_B          181 TGHTGDVMSLSLAPDT--RLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRAD  258 (340)
T ss_dssp             CCCSSCEEEEEECTTS--SEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT
T ss_pred             cCCCCceEEEEECCCC--CEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCC
Confidence            7899999999999998  899999999999999999999888887 7888999999999999999999999999999875


Q ss_pred             cccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc-cCCceEEEEEccCCCeeee
Q psy10867        259 PRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVLGAFLGLLPPAIHD  337 (343)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~  337 (343)
                      .....+         ....+...|++++|+|++++|++|+.|+.|++||+.+++.+..+. |.++|.+++|+|++++|++
T Consensus       259 ~~~~~~---------~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s  329 (340)
T 1got_B          259 QELMTY---------SHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVAT  329 (340)
T ss_dssp             EEEEEE---------CCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEE
T ss_pred             cEEEEE---------ccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEE
Confidence            432211         112334579999999999999999999999999999999999888 9999999999999999999


Q ss_pred             cccC
Q psy10867        338 YDFT  341 (343)
Q Consensus       338 ~~~~  341 (343)
                      ++..
T Consensus       330 ~s~D  333 (340)
T 1got_B          330 GSWD  333 (340)
T ss_dssp             EETT
T ss_pred             EcCC
Confidence            9864

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=100.00  E-value=4.5e-50  Score=329.99  Aligned_cols=265  Identities=18%  Similarity=0.295  Sum_probs=238.5

Q ss_pred             EEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcc----cceecccCCcceE
Q psy10867          7 VAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQE----KAQLRLICPGRIS   82 (343)
Q Consensus         7 ~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~----~~~~~~~~~~~v~   82 (343)
                      ++++++.||.|++||..+++.+..+..|.. .|.+++|+|++.++++++.|+.+++|++.+.+    ....+.+|.+.|.
T Consensus        69 ~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~-~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~  147 (340)
T 1got_B           69 LLLSASQDGKLIIWDSYTTNKVHAIPLRSS-WVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLS  147 (340)
T ss_dssp             EEEEEETTTEEEEEETTTCCEEEEEECSSS-CEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEE
T ss_pred             EEEEEeCCCcEEEEECCCCCcceEeecCCc-cEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEE
Confidence            344455589999999999999999999998 99999999999999999999999999998753    2345668999999


Q ss_pred             EEEECCCCCEEEEecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCC
Q psy10867         83 SMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIP  162 (343)
Q Consensus        83 ~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~  162 (343)
                      ++.|++++.+++++.|+.|++||+.+++.+..+.+|.+.|.+++|+|+++++++|+.|+.|++||++++.          
T Consensus       148 ~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~----------  217 (340)
T 1got_B          148 CCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGM----------  217 (340)
T ss_dssp             EEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCS----------
T ss_pred             EEEECCCCcEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCe----------
Confidence            9999999887777899999999999999999999999999999999999999999999999999998864          


Q ss_pred             CCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecC---CcEEEEEEcCCCC
Q psy10867        163 GSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILD---TRLTCVAFDGTED  239 (343)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~---~~i~~~~~~~~~~  239 (343)
                                  ....+.+|...|.+++|+|++  .+|++++.|++|++||+++++.+..+.+.   ..+.+++|+|+++
T Consensus       218 ------------~~~~~~~h~~~v~~v~~~p~~--~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~  283 (340)
T 1got_B          218 ------------CRQTFTGHESDINAICFFPNG--NAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGR  283 (340)
T ss_dssp             ------------EEEEECCCSSCEEEEEECTTS--SEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSS
T ss_pred             ------------eEEEEcCCcCCEEEEEEcCCC--CEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCC
Confidence                        445567899999999999999  89999999999999999999888777654   3699999999999


Q ss_pred             EEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEe
Q psy10867        240 NIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWH  307 (343)
Q Consensus       240 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd  307 (343)
                      +|++|+.|+.|++||+.....           +..+.+|...|++++|+|++++|++|+.|+.|++||
T Consensus       284 ~l~~g~~d~~i~vwd~~~~~~-----------~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd  340 (340)
T 1got_B          284 LLLAGYDDFNCNVWDALKADR-----------AGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN  340 (340)
T ss_dssp             EEEEEETTSEEEEEETTTCCE-----------EEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred             EEEEECCCCeEEEEEcccCcE-----------eeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence            999999999999999876443           456789999999999999999999999999999997

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=100.00  E-value=5.8e-50  Score=326.21  Aligned_cols=268  Identities=19%  Similarity=0.271  Sum_probs=243.6

Q ss_pred             eEEEecCCCCeEEEEecCCceE--EEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEE
Q psy10867          6 EVAFSYDGSGAISVWEPKGGTL--LMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISS   83 (343)
Q Consensus         6 ~~~~s~~~dg~i~iwd~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~   83 (343)
                      .++++++.|++|+|||+.+++.  ...+.+|.. .|.+++|+|++.++++++.|++|++||+.+++.+..+..+...+.+
T Consensus        49 ~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~-~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~  127 (321)
T 3ow8_A           49 ETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQL-GVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWT  127 (321)
T ss_dssp             CEEEEEETTSCEEEEEEETTEEEEEEEECCCSS-CEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCC
T ss_pred             CEEEEEcCCCCEEEEECCCCCeeeeeeeccCCC-CEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEE
Confidence            3566777899999999977654  557899999 9999999999999999999999999999999988888888889999


Q ss_pred             EEECCCCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCC
Q psy10867         84 MQASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIP  162 (343)
Q Consensus        84 ~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~  162 (343)
                      ++|+|++++|++ +.++.|++|++++++....+..|...|.+++|+|++++|++|+.||.|++||+++++          
T Consensus       128 ~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~----------  197 (321)
T 3ow8_A          128 LAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGK----------  197 (321)
T ss_dssp             EEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE----------
T ss_pred             EEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCc----------
Confidence            999999999997 578999999999999999999999999999999999999999999999999998864          


Q ss_pred             CCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCCEE
Q psy10867        163 GSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNI  241 (343)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l  241 (343)
                                  .+..+.+|..+|.+++|+|++  .+|++++.|+.|++||+++++....+. |...|.+++|+|++++|
T Consensus       198 ------------~~~~~~~h~~~v~~l~~spd~--~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l  263 (321)
T 3ow8_A          198 ------------LLHTLEGHAMPIRSLTFSPDS--QLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHF  263 (321)
T ss_dssp             ------------EEEEECCCSSCCCEEEECTTS--CEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEE
T ss_pred             ------------EEEEEcccCCceeEEEEcCCC--CEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEE
Confidence                        455667899999999999999  899999999999999999999888877 77889999999999999


Q ss_pred             EEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecc
Q psy10867        242 YMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTI  309 (343)
Q Consensus       242 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~  309 (343)
                      ++++.|+.|++||+.+...           +..+.+|...|.+++|+|++++|++++.||.|++||..
T Consensus       264 ~s~s~D~~v~iwd~~~~~~-----------~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p  320 (321)
T 3ow8_A          264 VSSSSDKSVKVWDVGTRTC-----------VHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP  320 (321)
T ss_dssp             EEEETTSCEEEEETTTTEE-----------EEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred             EEEeCCCcEEEEeCCCCEE-----------EEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence            9999999999999987543           45677899999999999999999999999999999963

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=100.00  E-value=4.7e-50  Score=329.00  Aligned_cols=284  Identities=16%  Similarity=0.144  Sum_probs=229.4

Q ss_pred             EEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCc-----------ccceecccCCcceEEEE
Q psy10867         17 ISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQ-----------EKAQLRLICPGRISSMQ   85 (343)
Q Consensus        17 i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~-----------~~~~~~~~~~~~v~~~~   85 (343)
                      .+.|++....+    ..+.. .|.+++|+|||++++++++ +++++||....           ........+...|.+++
T Consensus        16 ~r~w~~~~~~~----~~~~~-~v~~~~fs~dG~~l~~~sd-~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~   89 (344)
T 4gqb_B           16 AREWNLPPNAP----ACMER-QLEAARYRSDGALLLGASS-LSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLT   89 (344)
T ss_dssp             -------CCSC----SSCCS-EEEEEEECTTSCEEEEEEC-CSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEE
T ss_pred             ccccCCCCCCc----ccccC-CEEEEEECCCCCEEEEEeC-CceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEE
Confidence            45677654332    34566 8999999999999999885 78888873211           11112224567899999


Q ss_pred             ECCCCCEEEEecCCeEEEEEccCCceEEE----ecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCC
Q psy10867         86 ASPDAAYIAVSIETKLHMWQISSGRLLAT----ASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGI  161 (343)
Q Consensus        86 ~s~~~~~l~~~~d~~i~v~~~~~~~~~~~----~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~  161 (343)
                      |+|++.+++++.||.|+|||+.+++.+..    +.+|.+.|++++|+|++++|++|+.|+.|++||+++++         
T Consensus        90 ~s~d~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~---------  160 (344)
T 4gqb_B           90 WVGERGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQV---------  160 (344)
T ss_dssp             EETTTEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE---------
T ss_pred             EeCCCeEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCc---------
Confidence            99998877778999999999998875433    44899999999999999999999999999999999864         


Q ss_pred             CCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee---cCCcEEEEEEcCC-
Q psy10867        162 PGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI---LDTRLTCVAFDGT-  237 (343)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~---~~~~i~~~~~~~~-  237 (343)
                                   .+..+.+|...|.+++|+|++. .++++++.|++|++||+++++....+.   +...+.+++|+|+ 
T Consensus       161 -------------~~~~~~~h~~~V~~~~~~~~~~-~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~  226 (344)
T 4gqb_B          161 -------------VLSSYRAHAAQVTCVAASPHKD-SVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQ  226 (344)
T ss_dssp             -------------EEEEECCCSSCEEEEEECSSCT-TEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSC
T ss_pred             -------------EEEEEcCcCCceEEEEecCCCC-CceeeeccccccccccccccceeeeeecceeeccceeeeecCCC
Confidence                         5566778999999999999985 588999999999999999999888775   3456999999995 


Q ss_pred             CCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCC-CEEEEEeCCCcEEEEecccceeeee
Q psy10867        238 EDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITG-ITLLSSSADETLKIWHTISRQCLRT  316 (343)
Q Consensus       238 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~s~~~dg~i~iwd~~~~~~~~~  316 (343)
                      +++|++|+.||.|++||+++.+.           +..+.+|...|++++|+|++ ++|++|+.|++|++||+.+++++..
T Consensus       227 ~~~l~sg~~dg~v~~wd~~~~~~-----------~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~  295 (344)
T 4gqb_B          227 SEVFVFGDENGTVSLVDTKSTSC-----------VLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRS  295 (344)
T ss_dssp             TTEEEEEETTSEEEEEESCC--C-----------CEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEEE
T ss_pred             CcceEEeccCCcEEEEECCCCcE-----------EEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEEE
Confidence            56889999999999999987543           56788999999999999998 5899999999999999999987765


Q ss_pred             cccCCceEEEEEccCCCee-eeccc
Q psy10867        317 IQHKGPVLGAFLGLLPPAI-HDYDF  340 (343)
Q Consensus       317 ~~~~~~v~~~~~sp~~~~l-~~~~~  340 (343)
                      ..|.+.|++++|+|+++.| ++++.
T Consensus       296 ~~H~~~V~~v~~sp~~~~llas~s~  320 (344)
T 4gqb_B          296 QAHRDFVRDATWSPLNHSLLTTVGW  320 (344)
T ss_dssp             CCCSSCEEEEEECSSSTTEEEEEET
T ss_pred             cCCCCCEEEEEEeCCCCeEEEEEcC
Confidence            5599999999999999865 46654

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=100.00  E-value=3.9e-49  Score=325.82  Aligned_cols=285  Identities=14%  Similarity=0.172  Sum_probs=250.2

Q ss_pred             ceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-ecCCeEEE
Q psy10867         25 GTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SIETKLHM  103 (343)
Q Consensus        25 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v  103 (343)
                      .+...++++|.. .|.+++|+|++.++++++.||+|++||..+++....+..|...|.+++|+|++.+|++ +.|+.+++
T Consensus        54 ~~~~~~l~gH~~-~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v  132 (354)
T 2pbi_B           54 MKTRRTLKGHGN-KVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSV  132 (354)
T ss_dssp             CCEEEEEECCSS-CEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEE
T ss_pred             cEEEEEecCCCC-eEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEE
Confidence            356788999999 9999999999999999999999999999988888777788899999999999999997 68999999


Q ss_pred             EEccCC------ceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceee
Q psy10867        104 WQISSG------RLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLH  177 (343)
Q Consensus       104 ~~~~~~------~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (343)
                      |++...      .....+.+|.+.|.+++|+|++..|++++.|++|++||+++++                      .+.
T Consensus       133 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~----------------------~~~  190 (354)
T 2pbi_B          133 YPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQ----------------------LLQ  190 (354)
T ss_dssp             EECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCC----------------------EEE
T ss_pred             EEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCe----------------------EEE
Confidence            998643      3345677899999999999999999999999999999998864                      455


Q ss_pred             eecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEee
Q psy10867        178 VKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLR  256 (343)
Q Consensus       178 ~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~  256 (343)
                      .+.+|...|.+++++|+..+.+|++++.|+.|++||+++++.+..+. |...|.+++|+|++++|++++.|+.|++||++
T Consensus       191 ~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~  270 (354)
T 2pbi_B          191 SFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLR  270 (354)
T ss_dssp             EEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred             EEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECC
Confidence            66789999999999885433799999999999999999999988886 78889999999999999999999999999998


Q ss_pred             cccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc-cCCceEEEEEccCCCee
Q psy10867        257 QVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVLGAFLGLLPPAI  335 (343)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~l  335 (343)
                      .......+         ....+...+.+++|+|++++|++++.|+.|++||+.+++.+..+. |.+.|++++|+|++++|
T Consensus       271 ~~~~~~~~---------~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l  341 (354)
T 2pbi_B          271 ADREVAIY---------SKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAF  341 (354)
T ss_dssp             TTEEEEEE---------CCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCE
T ss_pred             CCcEEEEE---------cCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEE
Confidence            65332211         111234578999999999999999999999999999999988887 99999999999999999


Q ss_pred             eecccC
Q psy10867        336 HDYDFT  341 (343)
Q Consensus       336 ~~~~~~  341 (343)
                      ++++..
T Consensus       342 ~sgs~D  347 (354)
T 2pbi_B          342 CSGSWD  347 (354)
T ss_dssp             EEEETT
T ss_pred             EEEcCC
Confidence            999864

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=100.00  E-value=7.1e-48  Score=339.41  Aligned_cols=290  Identities=24%  Similarity=0.356  Sum_probs=256.4

Q ss_pred             EecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECC
Q psy10867          9 FSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASP   88 (343)
Q Consensus         9 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~   88 (343)
                      ++++.|+.|++||. +++.+..+.+|.. .|.+++|+|++.++++++.|+.|++||..... ...+..|...|.+++|+|
T Consensus       278 ~~~~~d~~i~~w~~-~~~~~~~~~~h~~-~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~-~~~~~~~~~~v~~~~~s~  354 (577)
T 2ymu_A          278 ASASDDKTVKLWNR-NGQLLQTLTGHSS-SVWGVAFSPDGQTIASASDDKTVKLWNRNGQH-LQTLTGHSSSVWGVAFSP  354 (577)
T ss_dssp             EEEETTSCEEEEET-TSCEEEEECCCSS-CEEEEEECTTSSEEEEEETTSCEEEEETTSCE-EEEECCCSSCEEEEEECT
T ss_pred             EEEeCCCEEEEEeC-CCcEEEEEecCCC-CeEEEEECCCCCEEEEEeCCCeEEEEeCCCCe-eEEEeCCCCCEEEEEECC
Confidence            34444899999996 6788889999999 99999999999999999989999999987654 455668999999999999


Q ss_pred             CCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCC
Q psy10867         89 DAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGK  167 (343)
Q Consensus        89 ~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~  167 (343)
                      ++++|++ +.|+.|++|+. +++.+..+.+|...|.+++|+|++++|++++.|+.|++||....                
T Consensus       355 ~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~~----------------  417 (577)
T 2ymu_A          355 DGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQ----------------  417 (577)
T ss_dssp             TSSEEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTCC----------------
T ss_pred             CCCEEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCC----------------
Confidence            9999997 67899999995 67888899999999999999999999999999999999996542                


Q ss_pred             ccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCCEEEEEcC
Q psy10867        168 GVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIYMGTS  246 (343)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~  246 (343)
                             .+..+.+|...|.+++|+|++  .+|++++.|+.|++||. +++.+..+. |...+.+++|+|++++|++++.
T Consensus       418 -------~~~~~~~~~~~v~~~~~s~d~--~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~spd~~~las~~~  487 (577)
T 2ymu_A          418 -------LLQTLTGHSSSVWGVAFSPDD--QTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASD  487 (577)
T ss_dssp             -------EEEEEECCSSCEEEEEECTTS--SEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSCEEEEEET
T ss_pred             -------EEEEecCCCCCeEEEEECCCC--CEEEEEcCCCEEEEEEC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeC
Confidence                   556677899999999999999  89999999999999996 556666655 7889999999999999999999


Q ss_pred             CCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc-cCCceEE
Q psy10867        247 EGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVLG  325 (343)
Q Consensus       247 d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~  325 (343)
                      |+.|++||...            ..+..+.+|...|++++|+|++++|++++.||.|++||. +++++.++. |.+.|++
T Consensus       488 d~~i~iw~~~~------------~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~~~~~~h~~~v~~  554 (577)
T 2ymu_A          488 DKTVKLWNRNG------------QLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWG  554 (577)
T ss_dssp             TSEEEEEETTS------------CEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEE
T ss_pred             CCEEEEEcCCC------------CEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC-CCCEEEEEcCCCCCEEE
Confidence            99999999532            225567889999999999999999999999999999995 688888888 9999999


Q ss_pred             EEEccCCCeeeecccC
Q psy10867        326 AFLGLLPPAIHDYDFT  341 (343)
Q Consensus       326 ~~~sp~~~~l~~~~~~  341 (343)
                      ++|+||+++|++++..
T Consensus       555 ~~fs~dg~~l~s~~~D  570 (577)
T 2ymu_A          555 VAFSPDGQTIASASSD  570 (577)
T ss_dssp             EEECTTSSCEEEEETT
T ss_pred             EEEcCCCCEEEEEeCC
Confidence            9999999999998753

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=100.00  E-value=1.1e-48  Score=320.87  Aligned_cols=275  Identities=12%  Similarity=0.112  Sum_probs=220.9

Q ss_pred             ccceEEEecCC-------CCeEEEEecCC-----------ceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEe
Q psy10867          3 LLNEVAFSYDG-------SGAISVWEPKG-----------GTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWP   64 (343)
Q Consensus         3 ~v~~~~~s~~~-------dg~i~iwd~~~-----------~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~   64 (343)
                      .|.++.|+++|       |+++++||...           .........+.. .|.+++|+|++.+++++ .||+|+|||
T Consensus        32 ~v~~~~fs~dG~~l~~~sd~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~s~d~~l~~~s-~dg~v~lWd  109 (344)
T 4gqb_B           32 QLEAARYRSDGALLLGASSLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEA-GVADLTWVGERGILVAS-DSGAVELWE  109 (344)
T ss_dssp             EEEEEEECTTSCEEEEEECCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESS-CEEEEEEETTTEEEEEE-TTSEEEEEE
T ss_pred             CEEEEEECCCCCEEEEEeCCceEEeeceeeeeccccccCCcceeeeeeccCC-CEEEEEEeCCCeEEEEE-CCCEEEEEe
Confidence            46778888877       56667776321           111112223445 79999999998766554 559999999


Q ss_pred             CCCccccee----cccCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCC-EEEEec
Q psy10867         65 VNSQEKAQL----RLICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSN-FIVTGG  138 (343)
Q Consensus        65 ~~~~~~~~~----~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~  138 (343)
                      +.+++....    ..+|.+.|.+++|+|++++|++ +.|+.|++||+.+++++..+.+|.+.|.+++|+|++. +|++++
T Consensus       110 ~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s  189 (344)
T 4gqb_B          110 LDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCS  189 (344)
T ss_dssp             ECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEE
T ss_pred             ccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeec
Confidence            998876533    3479999999999999999997 6899999999999999999999999999999999875 789999


Q ss_pred             CCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCc
Q psy10867        139 EDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGE  218 (343)
Q Consensus       139 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~  218 (343)
                      .|+.|++||+++++....+.                    ...+...+.+++|+|++. .++++|+.|+.|++||+++++
T Consensus       190 ~D~~v~iwd~~~~~~~~~~~--------------------~~~~~~~~~~~~~~p~~~-~~l~sg~~dg~v~~wd~~~~~  248 (344)
T 4gqb_B          190 EDNRILLWDTRCPKPASQIG--------------------CSAPGYLPTSLAWHPQQS-EVFVFGDENGTVSLVDTKSTS  248 (344)
T ss_dssp             TTSCEEEEETTSSSCEEECC------------------------CCCEEEEEECSSCT-TEEEEEETTSEEEEEESCC--
T ss_pred             cccccccccccccceeeeee--------------------cceeeccceeeeecCCCC-cceEEeccCCcEEEEECCCCc
Confidence            99999999999875443321                    134566789999999764 789999999999999999999


Q ss_pred             eEEEee-cCCcEEEEEEcCCC-CEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCC-EEE
Q psy10867        219 DLLSLI-LDTRLTCVAFDGTE-DNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGI-TLL  295 (343)
Q Consensus       219 ~~~~~~-~~~~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~  295 (343)
                      .+..+. |...|.+++|+|++ ++|++|+.|+.|++||++..+            +..+.+|.+.|++++|+|+++ +|+
T Consensus       249 ~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~------------~~~~~~H~~~V~~v~~sp~~~~lla  316 (344)
T 4gqb_B          249 CVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSE------------LFRSQAHRDFVRDATWSPLNHSLLT  316 (344)
T ss_dssp             CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCE------------EEEECCCSSCEEEEEECSSSTTEEE
T ss_pred             EEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCc------------EEEEcCCCCCEEEEEEeCCCCeEEE
Confidence            998887 78889999999998 578999999999999987643            234678999999999999986 577


Q ss_pred             EEeCCCcEEEEecccce
Q psy10867        296 SSSADETLKIWHTISRQ  312 (343)
Q Consensus       296 s~~~dg~i~iwd~~~~~  312 (343)
                      +++.|++|++|++.+..
T Consensus       317 s~s~D~~v~~w~v~~~~  333 (344)
T 4gqb_B          317 TVGWDHQVVHHVVPTEP  333 (344)
T ss_dssp             EEETTSCEEEEECCC--
T ss_pred             EEcCCCeEEEEECCCCC
Confidence            99999999999997643

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=100.00  E-value=1.5e-47  Score=316.38  Aligned_cols=265  Identities=20%  Similarity=0.273  Sum_probs=234.7

Q ss_pred             EEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCc------ccceecccCCcc
Q psy10867          7 VAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQ------EKAQLRLICPGR   80 (343)
Q Consensus         7 ~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~------~~~~~~~~~~~~   80 (343)
                      .++|++.||.|++||..+++....+..|.. .|.+++|+|++.++++++.|+.+++|++...      .....+..|...
T Consensus        78 ~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~-~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~  156 (354)
T 2pbi_B           78 RIVSSSQDGKVIVWDSFTTNKEHAVTMPCT-WVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNY  156 (354)
T ss_dssp             EEEEEETTSEEEEEETTTCCEEEEEECSSS-CCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSC
T ss_pred             EEEEEeCCCeEEEEECCCCCcceEEecCCC-CEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccccceeeeccCCc
Confidence            344455589999999999999999999988 9999999999999999999999999998643      223455689999


Q ss_pred             eEEEEECCCCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEec--CCCEEEEecCCCeEEEeecCccceeeee
Q psy10867         81 ISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSA--DSNFIVTGGEDGTICVWQLSRLICKQTV  157 (343)
Q Consensus        81 v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~s~~~dg~i~iwd~~~~~~~~~~  157 (343)
                      |.+++|+|++..|++ +.|++|++||+++++.+..+.+|...|.+++|+|  ++++|++|+.||.|++||++++.     
T Consensus       157 v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~-----  231 (354)
T 2pbi_B          157 LSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQ-----  231 (354)
T ss_dssp             EEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCC-----
T ss_pred             EEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCc-----
Confidence            999999999988876 7899999999999999999999999999999987  56899999999999999999864     


Q ss_pred             ecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeec---CCcEEEEEE
Q psy10867        158 AFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLIL---DTRLTCVAF  234 (343)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~---~~~i~~~~~  234 (343)
                                       .+..+..|...|.+++|+|++  .+|++++.|++|++||+++++.+..+..   ...+.+++|
T Consensus       232 -----------------~~~~~~~h~~~v~~v~~~p~~--~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~  292 (354)
T 2pbi_B          232 -----------------CVQAFETHESDVNSVRYYPSG--DAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDF  292 (354)
T ss_dssp             -----------------EEEEECCCSSCEEEEEECTTS--SEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEE
T ss_pred             -----------------EEEEecCCCCCeEEEEEeCCC--CEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEE
Confidence                             445567899999999999999  8999999999999999999887776653   346899999


Q ss_pred             cCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEe
Q psy10867        235 DGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWH  307 (343)
Q Consensus       235 ~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd  307 (343)
                      +|++++|++|+.|+.|++||+.+...           +..+.+|...|++++|+|++++|++|+.|+.|++|+
T Consensus       293 s~~g~~l~~g~~d~~i~vwd~~~~~~-----------~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~  354 (354)
T 2pbi_B          293 SLSGRLLFAGYNDYTINVWDVLKGSR-----------VSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA  354 (354)
T ss_dssp             CTTSSEEEEEETTSCEEEEETTTCSE-----------EEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred             eCCCCEEEEEECCCcEEEEECCCCce-----------EEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence            99999999999999999999876443           445778999999999999999999999999999996

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=100.00  E-value=1.3e-47  Score=312.03  Aligned_cols=280  Identities=22%  Similarity=0.313  Sum_probs=248.1

Q ss_pred             ceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-ecCCeEEE
Q psy10867         25 GTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SIETKLHM  103 (343)
Q Consensus        25 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v  103 (343)
                      .....++.+|.. .|.+++|+|++.++++++.||.|++|+..+++....+..|...|.+++|+|++++|++ +.|+.|++
T Consensus        13 ~~~~~~~~gh~~-~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~v   91 (312)
T 4ery_A           13 YALKFTLAGHTK-AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKI   91 (312)
T ss_dssp             CEEEEEECCCSS-CEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred             ceeEEEEcccCC-cEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEE
Confidence            456778899999 9999999999999999999999999999999888888899999999999999999987 68999999


Q ss_pred             EEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccc
Q psy10867        104 WQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHS  183 (343)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (343)
                      ||+++++.+..+.+|...|.+++|+|++++|++|+.|+.|++||+++++                      ....+..|.
T Consensus        92 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~----------------------~~~~~~~~~  149 (312)
T 4ery_A           92 WDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGK----------------------CLKTLPAHS  149 (312)
T ss_dssp             EETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCC----------------------EEEEECCCS
T ss_pred             EECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCE----------------------EEEEecCCC
Confidence            9999999999999999999999999999999999999999999998864                      445566799


Q ss_pred             cceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee--cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeeccccc
Q psy10867        184 LPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI--LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRT  261 (343)
Q Consensus       184 ~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~  261 (343)
                      .+|.+++|+|++  .++++++.|+.|++||+++++.+..+.  +...+..++|+|++++|++++.|+.|++||++.....
T Consensus       150 ~~v~~~~~~~~~--~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~  227 (312)
T 4ery_A          150 DPVSAVHFNRDG--SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCL  227 (312)
T ss_dssp             SCEEEEEECTTS--SEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEE
T ss_pred             CcEEEEEEcCCC--CEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEE
Confidence            999999999998  899999999999999999998887764  4567999999999999999999999999999875432


Q ss_pred             ccccccCCCCCCccccccCcE---EEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc-cCCceEEEEEccCCCeeee
Q psy10867        262 RDHHIQDSTSNPDFIGHEKQV---TSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVLGAFLGLLPPAIHD  337 (343)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~~~v---~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~  337 (343)
                                 ..+.+|....   ......+++.+|++|+.||.|++||+.+++.+..+. |...|.+++|+|++++|++
T Consensus       228 -----------~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s  296 (312)
T 4ery_A          228 -----------KTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIAS  296 (312)
T ss_dssp             -----------EEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEE
T ss_pred             -----------EEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCCceEE
Confidence                       2344454432   222334678899999999999999999999999998 9999999999999999998


Q ss_pred             ccc
Q psy10867        338 YDF  340 (343)
Q Consensus       338 ~~~  340 (343)
                      ++.
T Consensus       297 ~~~  299 (312)
T 4ery_A          297 AAL  299 (312)
T ss_dssp             EEC
T ss_pred             EEc
Confidence            864

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=100.00  E-value=1.4e-47  Score=312.30  Aligned_cols=276  Identities=21%  Similarity=0.287  Sum_probs=237.5

Q ss_pred             eEEEecCCCCeEEEEecCC-----ceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcc
Q psy10867          6 EVAFSYDGSGAISVWEPKG-----GTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGR   80 (343)
Q Consensus         6 ~~~~s~~~dg~i~iwd~~~-----~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~   80 (343)
                      .+++|++.|++|++|++..     +.++..+++|.. .|.+++|+|++.++++++.|++|++||+.+++....+.+|...
T Consensus        31 ~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~-~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~  109 (319)
T 3frx_A           31 NLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSH-IVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSD  109 (319)
T ss_dssp             TEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSS-CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSC
T ss_pred             cEEEEecCCccEEEecCCCCCccccccceEEeCCcc-cEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCc
Confidence            3556666799999999864     456788999999 9999999999999999999999999999999988888899999


Q ss_pred             eEEEEECCCCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecC------CCEEEEecCCCeEEEeecCccce
Q psy10867         81 ISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSAD------SNFIVTGGEDGTICVWQLSRLIC  153 (343)
Q Consensus        81 v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~------~~~l~s~~~dg~i~iwd~~~~~~  153 (343)
                      |.+++|+|++.+|++ +.|+.|++||++ ++.+..+.+|...|.+++|.|.      +..+++++.|+.|++||+++.. 
T Consensus       110 v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~-  187 (319)
T 3frx_A          110 VMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQ-  187 (319)
T ss_dssp             EEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTE-
T ss_pred             EEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcch-
Confidence            999999999999887 689999999986 5677888899999999999984      4489999999999999998753 


Q ss_pred             eeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCCcEEEEE
Q psy10867        154 KQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVA  233 (343)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~  233 (343)
                                           ....+.+|...|.+++|+|++  .+|++++.|+.|++||+++++.+..+.....+.+++
T Consensus       188 ---------------------~~~~~~~h~~~v~~~~~sp~g--~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~  244 (319)
T 3frx_A          188 ---------------------IEADFIGHNSNINTLTASPDG--TLIASAGKDGEIMLWNLAAKKAMYTLSAQDEVFSLA  244 (319)
T ss_dssp             ---------------------EEEEECCCCSCEEEEEECTTS--SEEEEEETTCEEEEEETTTTEEEEEEECCSCEEEEE
T ss_pred             ---------------------hheeecCCCCcEEEEEEcCCC--CEEEEEeCCCeEEEEECCCCcEEEEecCCCcEEEEE
Confidence                                 445567899999999999999  899999999999999999999999998888999999


Q ss_pred             EcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccc
Q psy10867        234 FDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISR  311 (343)
Q Consensus       234 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~  311 (343)
                      |+|++.+|++++.+ .+++|++..........   .........|...+.+++|+|||++|++|+.||.|++||+.++
T Consensus       245 ~sp~~~~la~~~~~-~i~v~~~~~~~~~~~~~---~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~t~  318 (319)
T 3frx_A          245 FSPNRYWLAAATAT-GIKVFSLDPQYLVDDLR---PEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVMTA  318 (319)
T ss_dssp             ECSSSSEEEEEETT-EEEEEEETTEEEEEEEC---CCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEEEC
T ss_pred             EcCCCCEEEEEcCC-CcEEEEeCcCeeeeccC---ccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEEeec
Confidence            99999999988754 59999987644322211   0111123456778999999999999999999999999999764

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=100.00  E-value=1.4e-47  Score=310.29  Aligned_cols=274  Identities=18%  Similarity=0.208  Sum_probs=237.1

Q ss_pred             ccceEEEecCC--------CCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceec
Q psy10867          3 LLNEVAFSYDG--------SGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLR   74 (343)
Q Consensus         3 ~v~~~~~s~~~--------dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~   74 (343)
                      +|.++.|+|++        ||.|++||+.+++.+..+..|.. .|.+++|+|++.++++++.|+.|++||+.+++.+..+
T Consensus        15 ~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~   93 (304)
T 2ynn_A           15 RVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTET-PVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDF   93 (304)
T ss_dssp             CEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSS-CEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred             ceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCC-cEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEE
Confidence            46666666665        89999999999999999999998 9999999999999999999999999999999988888


Q ss_pred             ccCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCC-ceEEEecccCCCeEEEEEec-CCCEEEEecCCCeEEEeecCcc
Q psy10867         75 LICPGRISSMQASPDAAYIAV-SIETKLHMWQISSG-RLLATASSHYQPITIVKWSA-DSNFIVTGGEDGTICVWQLSRL  151 (343)
Q Consensus        75 ~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~-~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~  151 (343)
                      .+|.+.|.+++|+|++++|++ +.|++|++||++++ .....+.+|...|.+++|+| ++..|++|+.|+.|++||++..
T Consensus        94 ~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~  173 (304)
T 2ynn_A           94 EAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQS  173 (304)
T ss_dssp             ECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCS
T ss_pred             eCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCC
Confidence            899999999999999999987 68999999999987 45567889999999999999 6789999999999999999875


Q ss_pred             ceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEE
Q psy10867        152 ICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLT  230 (343)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~  230 (343)
                      ...                     ......|...+..+.++|..++.+|++++.|++|++||+++++++..+. |...|.
T Consensus       174 ~~~---------------------~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~  232 (304)
T 2ynn_A          174 TPN---------------------FTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVS  232 (304)
T ss_dssp             SCS---------------------EEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEE
T ss_pred             Ccc---------------------ceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEE
Confidence            432                     2223456788999999885433799999999999999999999998887 788899


Q ss_pred             EEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCC--EEEEEeCCCcEEEEec
Q psy10867        231 CVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGI--TLLSSSADETLKIWHT  308 (343)
Q Consensus       231 ~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~--~l~s~~~dg~i~iwd~  308 (343)
                      +++|+|++++|++|+.||.|++||+.+...           ...+..|...+.+++|+|++.  ++++|+.| .+.+|++
T Consensus       233 ~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~-g~~~~~~  300 (304)
T 2ynn_A          233 FAVFHPTLPIIISGSEDGTLKIWNSSTYKV-----------EKTLNVGLERSWCIATHPTGRKNYIASGFDN-GFTVLSL  300 (304)
T ss_dssp             EEEECSSSSEEEEEETTSCEEEEETTTCCE-----------EEEECCSSSSEEEEEECTTCGGGCEEEEETT-EEEEEEC
T ss_pred             EEEECCCCCEEEEEcCCCeEEEEECCCCce-----------eeeccCCCccEEEEEECCCCCceEEEEecCC-ceEEEEe
Confidence            999999999999999999999999887543           445677889999999999875  57777665 5778877


Q ss_pred             cc
Q psy10867        309 IS  310 (343)
Q Consensus       309 ~~  310 (343)
                      .+
T Consensus       301 ~~  302 (304)
T 2ynn_A          301 GN  302 (304)
T ss_dssp             C-
T ss_pred             cc
Confidence            54

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=100.00  E-value=3.3e-47  Score=313.48  Aligned_cols=297  Identities=15%  Similarity=0.182  Sum_probs=241.6

Q ss_pred             CceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccc---eecccCCcceEEEEECCCCCEEEE-ecCC
Q psy10867         24 GGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKA---QLRLICPGRISSMQASPDAAYIAV-SIET   99 (343)
Q Consensus        24 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~---~~~~~~~~~v~~~~~s~~~~~l~~-~~d~   99 (343)
                      ..+++.++++|....|.+++|+|++.++++++.|+.|+|||+.++...   ....+|...|.+++|+|++++|++ +.|+
T Consensus         4 ~~~~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~   83 (345)
T 3fm0_A            4 SLVLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDA   83 (345)
T ss_dssp             CEEEEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTS
T ss_pred             cEEEeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCC
Confidence            346788899997547999999999999999999999999999877543   223579999999999999999997 6899


Q ss_pred             eEEEEEccCCc--eEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceee
Q psy10867        100 KLHMWQISSGR--LLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLH  177 (343)
Q Consensus       100 ~i~v~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (343)
                      .+++|++.++.  .+..+.+|.+.|.+++|+|++++|++|+.|+.|++||++......                   .+.
T Consensus        84 ~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~-------------------~~~  144 (345)
T 3fm0_A           84 TTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYE-------------------CVS  144 (345)
T ss_dssp             CEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEE-------------------EEE
T ss_pred             cEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeE-------------------EEE
Confidence            99999998774  567889999999999999999999999999999999998753221                   455


Q ss_pred             eecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceE--EEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEE
Q psy10867        178 VKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDL--LSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFC  254 (343)
Q Consensus       178 ~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~--~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d  254 (343)
                      .+.+|...|.+++|+|++  .+|++++.|+.|++||.++++..  ..+. |...|.+++|+|++++|++++.|+.|++||
T Consensus       145 ~~~~h~~~v~~~~~~p~~--~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~  222 (345)
T 3fm0_A          145 VLNSHTQDVKHVVWHPSQ--ELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWR  222 (345)
T ss_dssp             EECCCCSCEEEEEECSSS--SCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred             EecCcCCCeEEEEECCCC--CEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEec
Confidence            677899999999999999  79999999999999999887543  4444 778899999999999999999999999999


Q ss_pred             eecccccccccccC----CCCCCcccc-ccCcEEEEEEccCCCEEEEEeCCCcEEEEeccccee---------eeecc-c
Q psy10867        255 LRQVPRTRDHHIQD----STSNPDFIG-HEKQVTSLSCSITGITLLSSSADETLKIWHTISRQC---------LRTIQ-H  319 (343)
Q Consensus       255 ~~~~~~~~~~~~~~----~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~---------~~~~~-~  319 (343)
                      ..............    ..++..+.+ |...|++++|+|++..|++++.|+.|++|+...+..         ..... |
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h  302 (345)
T 3fm0_A          223 QYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAH  302 (345)
T ss_dssp             EECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSS
T ss_pred             cccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccc
Confidence            86543322111000    011122333 888999999999999999999999999999875421         12233 8


Q ss_pred             CCceEEEEEccCCC-eeeecccC
Q psy10867        320 KGPVLGAFLGLLPP-AIHDYDFT  341 (343)
Q Consensus       320 ~~~v~~~~~sp~~~-~l~~~~~~  341 (343)
                      ...|++++|+|++. +|++++..
T Consensus       303 ~~~V~~v~~~p~~~~~laS~s~D  325 (345)
T 3fm0_A          303 SQDVNCVAWNPKEPGLLASCSDD  325 (345)
T ss_dssp             SSCEEEEEECSSSTTEEEEEETT
T ss_pred             cCcEeEeEEeCCCceEEEEcCCC
Confidence            89999999999985 88887653

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=100.00  E-value=6.8e-49  Score=327.77  Aligned_cols=303  Identities=15%  Similarity=0.191  Sum_probs=255.0

Q ss_pred             CeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEE
Q psy10867         15 GAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIA   94 (343)
Q Consensus        15 g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~   94 (343)
                      ..+..|+.....+.+++++|.+ .|++++|+|++.++++++.|++|++||+.+++....+..|...|.+++|+|++++|+
T Consensus        46 ~~~~~~~~~~~~~~~~l~gH~~-~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~la  124 (380)
T 3iz6_a           46 RTAVSFNPTDLVCCRTLQGHSG-KVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVA  124 (380)
T ss_dssp             GGCCCCCCCCCEEEEEECCCSS-CEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEE
T ss_pred             ccccccccceeEEeeccccccc-EEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEE
Confidence            3456788888899999999999 999999999999999999999999999999998888889999999999999999999


Q ss_pred             E-ecCCeEEEEEccCCc-------eEEEecccCCCeEEEEEecC-CCEEEEecCCCeEEEeecCccceeeeeecCCCCCC
Q psy10867         95 V-SIETKLHMWQISSGR-------LLATASSHYQPITIVKWSAD-SNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSS  165 (343)
Q Consensus        95 ~-~~d~~i~v~~~~~~~-------~~~~~~~~~~~v~~~~~~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~  165 (343)
                      + +.|+.+++|++.+..       ....+.+|.+.|.++.|.|+ +..|++|+.|+.|++||++++.....+.       
T Consensus       125 s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~-------  197 (380)
T 3iz6_a          125 CGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFG-------  197 (380)
T ss_dssp             ECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEEC-------
T ss_pred             EeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEee-------
Confidence            8 689999999987532       34567899999999999996 4579999999999999999876554331       


Q ss_pred             CCccccccceeeeecccccceEEEEeec-CCCceEEEEeeCCCeEEEEecC-CCceEEEee-cCCcEEEEEEcCCCCEEE
Q psy10867        166 GKGVTGLTEPLHVKSQHSLPVTHVTLSK-LGAKSRVASVSHDRTCKIFDLC-TGEDLLSLI-LDTRLTCVAFDGTEDNIY  242 (343)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~l~~~~~d~~i~~wd~~-~~~~~~~~~-~~~~i~~~~~~~~~~~l~  242 (343)
                                .....+|...|.++++++ ++  .++++|+.|+.|++||++ .++.+..+. |...|.+++|+|++++|+
T Consensus       198 ----------~~~~~~h~~~v~~~~~~~~~~--~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~  265 (380)
T 3iz6_a          198 ----------SEFPSGHTADVLSLSINSLNA--NMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFG  265 (380)
T ss_dssp             ----------CCSSSSCCSCEEEEEECSSSC--CEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEE
T ss_pred             ----------cccCCCCccCeEEEEeecCCC--CEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEE
Confidence                      111256899999999987 55  799999999999999998 446666665 788999999999999999


Q ss_pred             EEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeec----c
Q psy10867        243 MGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTI----Q  318 (343)
Q Consensus       243 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~----~  318 (343)
                      +|+.|+.|++||+++......+...    ......+...|++++|+|+|++|++|+.||.|++||+.+++.+..+    .
T Consensus       266 s~s~D~~i~lwd~~~~~~~~~~~~~----~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~  341 (380)
T 3iz6_a          266 TGSDDGTCRLFDMRTGHQLQVYNRE----PDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQN  341 (380)
T ss_dssp             EECSSSCEEEEETTTTEEEEEECCC----CSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCS
T ss_pred             EEcCCCeEEEEECCCCcEEEEeccc----ccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccC
Confidence            9999999999999876543322110    0111223446899999999999999999999999999998887766    3


Q ss_pred             -cCCceEEEEEccCCCeeeecccC
Q psy10867        319 -HKGPVLGAFLGLLPPAIHDYDFT  341 (343)
Q Consensus       319 -~~~~v~~~~~sp~~~~l~~~~~~  341 (343)
                       |.+.|.+++|+|+|++|++++..
T Consensus       342 ~h~~~v~~l~~s~dg~~l~sgs~D  365 (380)
T 3iz6_a          342 SHEGRISCLGLSSDGSALCTGSWD  365 (380)
T ss_dssp             SCCCCCCEEEECSSSSEEEEECTT
T ss_pred             CCCCceEEEEECCCCCEEEEeeCC
Confidence             88999999999999999999864

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=100.00  E-value=4.4e-47  Score=312.18  Aligned_cols=301  Identities=16%  Similarity=0.177  Sum_probs=261.0

Q ss_pred             ccceEEEecCCC--------CeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceec
Q psy10867          3 LLNEVAFSYDGS--------GAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLR   74 (343)
Q Consensus         3 ~v~~~~~s~~~d--------g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~   74 (343)
                      +|..++|++++.        +.+.+|+...........+|.. .|.+++|+|++.++++++ ||.|++|++.+++.....
T Consensus        11 ~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~   88 (337)
T 1gxr_A           11 PAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGE-VVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPV   88 (337)
T ss_dssp             ECCEEEECSSSCEEECCCCTTSSSSTTCCSEEEEEEEECCSS-CCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCS
T ss_pred             ceeEEEECCCCCEEEeecCCCcEeccccCCccccceeccCCC-ceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeee
Confidence            577888888873        3445555555444555557888 999999999999999998 699999999887644222


Q ss_pred             ---c--cCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCCc--eEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEe
Q psy10867         75 ---L--ICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGR--LLATASSHYQPITIVKWSADSNFIVTGGEDGTICVW  146 (343)
Q Consensus        75 ---~--~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw  146 (343)
                         .  .|...|.+++|+|++++|++ +.|+.|++||+.+++  ....+..|...|.+++|+|+++++++++.||.|++|
T Consensus        89 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~  168 (337)
T 1gxr_A           89 SQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVW  168 (337)
T ss_dssp             EEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred             ecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEE
Confidence               2  68899999999999998887 678999999999887  566778899999999999999999999999999999


Q ss_pred             ecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecC
Q psy10867        147 QLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILD  226 (343)
Q Consensus       147 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~  226 (343)
                      |+++++                      ....+..|...|.+++|+|++  .++++++.|+.|++||+++++.+..+.+.
T Consensus       169 d~~~~~----------------------~~~~~~~~~~~i~~~~~~~~~--~~l~~~~~dg~i~~~d~~~~~~~~~~~~~  224 (337)
T 1gxr_A          169 DLHNQT----------------------LVRQFQGHTDGASCIDISNDG--TKLWTGGLDNTVRSWDLREGRQLQQHDFT  224 (337)
T ss_dssp             ETTTTE----------------------EEEEECCCSSCEEEEEECTTS--SEEEEEETTSEEEEEETTTTEEEEEEECS
T ss_pred             eCCCCc----------------------eeeeeecccCceEEEEECCCC--CEEEEEecCCcEEEEECCCCceEeeecCC
Confidence            998864                      445566799999999999998  89999999999999999999999998899


Q ss_pred             CcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEE
Q psy10867        227 TRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIW  306 (343)
Q Consensus       227 ~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw  306 (343)
                      ..+.+++|+|+++++++++.++.|++||++....            ..+..|...|.+++|+|++++|++++.||.|++|
T Consensus       225 ~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~------------~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~  292 (337)
T 1gxr_A          225 SQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDK------------YQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAW  292 (337)
T ss_dssp             SCEEEEEECTTSSEEEEEETTSCEEEEETTSSCE------------EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred             CceEEEEECCCCCEEEEEcCCCcEEEEECCCCCe------------EEEcCCccceeEEEECCCCCEEEEecCCCcEEEE
Confidence            9999999999999999999999999999986432            2456789999999999999999999999999999


Q ss_pred             ecccceeeeecccCCceEEEEEccCCCeeeecccC
Q psy10867        307 HTISRQCLRTIQHKGPVLGAFLGLLPPAIHDYDFT  341 (343)
Q Consensus       307 d~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~  341 (343)
                      |+.+++.+....+...+.+++|+|++++|++++..
T Consensus       293 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d  327 (337)
T 1gxr_A          293 RTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGD  327 (337)
T ss_dssp             ETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETT
T ss_pred             ECCCCeEEEEecCCCcEEEEEECCCCCEEEEecCC
Confidence            99999988777799999999999999999988754

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=100.00  E-value=3.1e-48  Score=320.68  Aligned_cols=274  Identities=13%  Similarity=0.154  Sum_probs=223.8

Q ss_pred             ccceEEEecCC--------------CCeEEEEecCCceEE----EEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEe
Q psy10867          3 LLNEVAFSYDG--------------SGAISVWEPKGGTLL----MSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWP   64 (343)
Q Consensus         3 ~v~~~~~s~~~--------------dg~i~iwd~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~   64 (343)
                      .|+++.|||||              |+.|++|+..++...    ....+|.. .|.+++|+|++.+++++.+ |+|+|||
T Consensus        44 ~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~-~V~~~~~s~d~~~l~~s~d-g~v~lWd  121 (357)
T 4g56_B           44 QIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEA-GVTDVAWVSEKGILVASDS-GAVELWE  121 (357)
T ss_dssp             EEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSS-CEEEEEEETTTEEEEEETT-SCEEEC-
T ss_pred             CEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCC-CEEEEEEcCCCCEEEEECC-CEEEEee
Confidence            47788888887              578999998776543    34456777 8999999999998887765 9999999


Q ss_pred             CCCcccce----ecccCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCC-EEEEec
Q psy10867         65 VNSQEKAQ----LRLICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSN-FIVTGG  138 (343)
Q Consensus        65 ~~~~~~~~----~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~  138 (343)
                      +.+++...    ...+|...|.+++|+|++++|++ +.|+.|++||+++++.+..+.+|...|.+++|+|++. ++++++
T Consensus       122 ~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~  201 (357)
T 4g56_B          122 ILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCG  201 (357)
T ss_dssp             -------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEE
T ss_pred             ccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeec
Confidence            98877542    23378999999999999999997 6899999999999999999999999999999999875 789999


Q ss_pred             CCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCc
Q psy10867        139 EDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGE  218 (343)
Q Consensus       139 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~  218 (343)
                      .||.|++||+++++....                    .....+...+.+++|+|++. .+|++|+.|+.|++||+++++
T Consensus       202 ~dg~v~~wd~~~~~~~~~--------------------~~~~~~~~~v~~v~~sp~~~-~~la~g~~d~~i~~wd~~~~~  260 (357)
T 4g56_B          202 EDGRILLWDTRKPKPATR--------------------IDFCASDTIPTSVTWHPEKD-DTFACGDETGNVSLVNIKNPD  260 (357)
T ss_dssp             TTSCEEECCTTSSSCBCB--------------------CCCTTCCSCEEEEEECTTST-TEEEEEESSSCEEEEESSCGG
T ss_pred             cCCceEEEECCCCceeee--------------------eeeccccccccchhhhhccc-ceEEEeecccceeEEECCCCc
Confidence            999999999988654322                    22345677899999999864 689999999999999999999


Q ss_pred             eEEEee-cCCcEEEEEEcCCC-CEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEcc-CCCEEE
Q psy10867        219 DLLSLI-LDTRLTCVAFDGTE-DNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSI-TGITLL  295 (343)
Q Consensus       219 ~~~~~~-~~~~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~  295 (343)
                      .+..+. +...|.+++|+|++ ++|++|+.|+.|++||+++.+..            ...+|.+.|++++|+| ++++|+
T Consensus       261 ~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~------------~~~~H~~~V~~vafsP~d~~~l~  328 (357)
T 4g56_B          261 SAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVF------------RDLSHRDFVTGVAWSPLDHSKFT  328 (357)
T ss_dssp             GCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEE------------EECCCSSCEEEEEECSSSTTEEE
T ss_pred             EeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEe------------EECCCCCCEEEEEEeCCCCCEEE
Confidence            988887 67889999999987 57899999999999998765432            2347999999999998 789999


Q ss_pred             EEeCCCcEEEEecccc
Q psy10867        296 SSSADETLKIWHTISR  311 (343)
Q Consensus       296 s~~~dg~i~iwd~~~~  311 (343)
                      +++.||+|++|++.+.
T Consensus       329 s~s~Dg~v~iW~~~~~  344 (357)
T 4g56_B          329 TVGWDHKVLHHHLPSE  344 (357)
T ss_dssp             EEETTSCEEEEECC--
T ss_pred             EEcCCCeEEEEECCCC
Confidence            9999999999999754

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=100.00  E-value=8.4e-47  Score=307.67  Aligned_cols=280  Identities=15%  Similarity=0.156  Sum_probs=241.0

Q ss_pred             ceEEEEEecCCCCcceEEEEeCCc-eEEEEEcCCCeEEEEeCCCc-----ccceecccCCcceEEEEECCCCCEEEE-ec
Q psy10867         25 GTLLMSYKGASVLSPHSMCLLGND-YVLGVEKGKPMIQAWPVNSQ-----EKAQLRLICPGRISSMQASPDAAYIAV-SI   97 (343)
Q Consensus        25 ~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~i~iw~~~~~-----~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~   97 (343)
                      ..+..++++|.+ .|.+++|+|++ .++++++.|++|++|++...     ..+..+.+|...|.+++|+|++++|++ +.
T Consensus         7 ~~l~~~l~gH~~-~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~   85 (319)
T 3frx_A            7 LVLRGTLEGHNG-WVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASW   85 (319)
T ss_dssp             EEEEEEECCCSS-CEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEET
T ss_pred             EEEEEEEccccc-eEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeC
Confidence            355678999999 99999999965 88888888899999998653     234567799999999999999999987 68


Q ss_pred             CCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceee
Q psy10867         98 ETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLH  177 (343)
Q Consensus        98 d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (343)
                      |++|++||+.+++.+..+.+|...|.+++|+|++.+|++|+.|+.|++||++..                       .+.
T Consensus        86 D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~-----------------------~~~  142 (319)
T 3frx_A           86 DKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQ-----------------------CLA  142 (319)
T ss_dssp             TSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSC-----------------------EEE
T ss_pred             CCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC-----------------------eEE
Confidence            999999999999999999999999999999999999999999999999999753                       556


Q ss_pred             eecccccceEEEEeecCCC----ceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEE
Q psy10867        178 VKSQHSLPVTHVTLSKLGA----KSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKS  252 (343)
Q Consensus       178 ~~~~~~~~v~~~~~~~~~~----~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i  252 (343)
                      .+.+|...|.++++.|...    ...+++++.|+.|++||+++++....+. |...|.+++|+|++++|++++.||.|++
T Consensus       143 ~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~i  222 (319)
T 3frx_A          143 TLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIML  222 (319)
T ss_dssp             EECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEE
T ss_pred             EEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEE
Confidence            6778999999999998641    1489999999999999999988877775 7889999999999999999999999999


Q ss_pred             EEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc---------cCCce
Q psy10867        253 FCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ---------HKGPV  323 (343)
Q Consensus       253 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~---------~~~~v  323 (343)
                      ||+......           ..+. +...|.+++|+|++.+|++++.+ .+++|++..+..+..+.         +...+
T Consensus       223 wd~~~~~~~-----------~~~~-~~~~v~~~~~sp~~~~la~~~~~-~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v  289 (319)
T 3frx_A          223 WNLAAKKAM-----------YTLS-AQDEVFSLAFSPNRYWLAAATAT-GIKVFSLDPQYLVDDLRPEFAGYSKAAEPHA  289 (319)
T ss_dssp             EETTTTEEE-----------EEEE-CCSCEEEEEECSSSSEEEEEETT-EEEEEEETTEEEEEEECCCCTTCCGGGCCCE
T ss_pred             EECCCCcEE-----------EEec-CCCcEEEEEEcCCCCEEEEEcCC-CcEEEEeCcCeeeeccCccccccccCcCcce
Confidence            999875442           2333 34679999999999999988765 59999998877666553         35678


Q ss_pred             EEEEEccCCCeeeecccC
Q psy10867        324 LGAFLGLLPPAIHDYDFT  341 (343)
Q Consensus       324 ~~~~~sp~~~~l~~~~~~  341 (343)
                      .+++|+|||++|++++..
T Consensus       290 ~~~~~spdg~~l~sg~~D  307 (319)
T 3frx_A          290 VSLAWSADGQTLFAGYTD  307 (319)
T ss_dssp             EEEEECTTSSEEEEEETT
T ss_pred             eEEEECCCCCEEEEeecC
Confidence            999999999999998754

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=100.00  E-value=4.2e-48  Score=323.01  Aligned_cols=279  Identities=20%  Similarity=0.275  Sum_probs=237.7

Q ss_pred             ccceEEEecC--------CCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcc-----
Q psy10867          3 LLNEVAFSYD--------GSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQE-----   69 (343)
Q Consensus         3 ~v~~~~~s~~--------~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~-----   69 (343)
                      +|+++.|+|+        .||+|+|||+.+++.+..++.|.. .|.+++|+|++.++++++.|+.+++|++.+..     
T Consensus        68 ~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~-~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~  146 (380)
T 3iz6_a           68 KVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCP-WVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGN  146 (380)
T ss_dssp             CEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCT-TCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCS
T ss_pred             EEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCC-CEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCC
Confidence            4556655555        489999999999999999999999 99999999999999999999999999987532     


Q ss_pred             --cceecccCCcceEEEEECCCC-CEEEE-ecCCeEEEEEccCCceEEEe-----cccCCCeEEEEEec-CCCEEEEecC
Q psy10867         70 --KAQLRLICPGRISSMQASPDA-AYIAV-SIETKLHMWQISSGRLLATA-----SSHYQPITIVKWSA-DSNFIVTGGE  139 (343)
Q Consensus        70 --~~~~~~~~~~~v~~~~~s~~~-~~l~~-~~d~~i~v~~~~~~~~~~~~-----~~~~~~v~~~~~~~-~~~~l~s~~~  139 (343)
                        ....+.+|.+.|.++.|+|++ ..|++ +.|++|++||+.+++.+..+     .+|...|.+++|++ ++++|++|+.
T Consensus       147 ~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~  226 (380)
T 3iz6_a          147 MPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSC  226 (380)
T ss_dssp             STTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEET
T ss_pred             ccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEEC
Confidence              235567899999999999964 44554 78999999999999988777     67899999999987 8899999999


Q ss_pred             CCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCce
Q psy10867        140 DGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGED  219 (343)
Q Consensus       140 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~  219 (343)
                      |+.|++||++...                     +.+..+.+|...|.+++|+|++  .+|++++.|++|++||+++++.
T Consensus       227 D~~v~~wd~~~~~---------------------~~~~~~~~h~~~v~~v~~~p~~--~~l~s~s~D~~i~lwd~~~~~~  283 (380)
T 3iz6_a          227 DTTVRLWDLRITS---------------------RAVRTYHGHEGDINSVKFFPDG--QRFGTGSDDGTCRLFDMRTGHQ  283 (380)
T ss_dssp             TSCEEEEETTTTC---------------------CCCEEECCCSSCCCEEEECTTS--SEEEEECSSSCEEEEETTTTEE
T ss_pred             CCeEEEEECCCCC---------------------cceEEECCcCCCeEEEEEecCC--CeEEEEcCCCeEEEEECCCCcE
Confidence            9999999997431                     2556677899999999999999  8999999999999999999998


Q ss_pred             EEEeecC--------CcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCC
Q psy10867        220 LLSLILD--------TRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITG  291 (343)
Q Consensus       220 ~~~~~~~--------~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~  291 (343)
                      +..+...        ..+.+++|+|++++|++|+.||.|++||+...+.....       .....+|.+.|++++|+|++
T Consensus       284 ~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~-------~~~~~~h~~~v~~l~~s~dg  356 (380)
T 3iz6_a          284 LQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNL-------GTLQNSHEGRISCLGLSSDG  356 (380)
T ss_dssp             EEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEE-------CCSCSSCCCCCCEEEECSSS
T ss_pred             EEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEE-------ecccCCCCCceEEEEECCCC
Confidence            8777531        23889999999999999999999999998765433221       11235799999999999999


Q ss_pred             CEEEEEeCCCcEEEEecccce
Q psy10867        292 ITLLSSSADETLKIWHTISRQ  312 (343)
Q Consensus       292 ~~l~s~~~dg~i~iwd~~~~~  312 (343)
                      ++|++|+.|+.|++|++...+
T Consensus       357 ~~l~sgs~D~~i~iW~~~~~~  377 (380)
T 3iz6_a          357 SALCTGSWDKNLKIWAFSGHR  377 (380)
T ss_dssp             SEEEEECTTSCEEEEECCSSS
T ss_pred             CEEEEeeCCCCEEEEecCCCc
Confidence            999999999999999997654

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=100.00  E-value=9e-47  Score=310.81  Aligned_cols=280  Identities=17%  Similarity=0.231  Sum_probs=231.8

Q ss_pred             ceEEEecCCCCeEEEEecCC-------ceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccC
Q psy10867          5 NEVAFSYDGSGAISVWEPKG-------GTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLIC   77 (343)
Q Consensus         5 ~~~~~s~~~dg~i~iwd~~~-------~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~   77 (343)
                      ..++++++.|++|++||+.+       +.+...+.+|.. .|.+++|+|++.++++++.|++|++||+.+++.+..+.+|
T Consensus        39 ~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~-~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h  117 (343)
T 2xzm_R           39 SPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNH-FVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGH  117 (343)
T ss_dssp             CCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSS-CEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECC
T ss_pred             CCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCC-ceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCC
Confidence            34677788899999999874       456778999999 9999999999999999999999999999999988888899


Q ss_pred             CcceEEEEECCCCCEEEE-ecCCeEEEEEccCCceEEEec---ccCCCeEEEEEecCC----------CEEEEecCCCeE
Q psy10867         78 PGRISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATAS---SHYQPITIVKWSADS----------NFIVTGGEDGTI  143 (343)
Q Consensus        78 ~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~---~~~~~v~~~~~~~~~----------~~l~s~~~dg~i  143 (343)
                      ...|.+++|+|++++|++ +.|+.|++||+... ......   +|...|.+++|+|++          .+|++++.||.|
T Consensus       118 ~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i  196 (343)
T 2xzm_R          118 QSEVYSVAFSPDNRQILSAGAEREIKLWNILGE-CKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRL  196 (343)
T ss_dssp             CSCEEEEEECSSTTEEEEEETTSCEEEEESSSC-EEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEE
T ss_pred             CCcEEEEEECCCCCEEEEEcCCCEEEEEeccCC-ceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEE
Confidence            999999999999998887 68999999999743 333333   788999999999986          789999999999


Q ss_pred             EEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecC-CCceEEE
Q psy10867        144 CVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLC-TGEDLLS  222 (343)
Q Consensus       144 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~-~~~~~~~  222 (343)
                      ++||....                       ....+.+|...|.+++|+|++  ++|++++.|+.|++||+. .......
T Consensus       197 ~iwd~~~~-----------------------~~~~~~~h~~~v~~~~~s~~g--~~l~sgs~dg~v~iwd~~~~~~~~~~  251 (343)
T 2xzm_R          197 KVWNTNFQ-----------------------IRYTFKAHESNVNHLSISPNG--KYIATGGKDKKLLIWDILNLTYPQRE  251 (343)
T ss_dssp             EEEETTTE-----------------------EEEEEECCSSCEEEEEECTTS--SEEEEEETTCEEEEEESSCCSSCSEE
T ss_pred             EEEcCCCc-----------------------eeEEEcCccccceEEEECCCC--CEEEEEcCCCeEEEEECCCCccccee
Confidence            99995432                       455667899999999999999  899999999999999994 4455566


Q ss_pred             eecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeeccccccccccc--CCCCCCccccccCcEEEEEEccCCCEEEEEeCC
Q psy10867        223 LILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQ--DSTSNPDFIGHEKQVTSLSCSITGITLLSSSAD  300 (343)
Q Consensus       223 ~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~--~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d  300 (343)
                      +.+...+.+++|+|++.+++++ .|+.|++||+.+........+.  .........+|...|++++|+|++++|++|+.|
T Consensus       252 ~~~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~D  330 (343)
T 2xzm_R          252 FDAGSTINQIAFNPKLQWVAVG-TDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFTD  330 (343)
T ss_dssp             EECSSCEEEEEECSSSCEEEEE-ESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEETT
T ss_pred             ecCCCcEEEEEECCCCCEEEEE-CCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEecCC
Confidence            6677789999999999888755 5788999999875443211110  000112234788899999999999999999999


Q ss_pred             CcEEEEecccce
Q psy10867        301 ETLKIWHTISRQ  312 (343)
Q Consensus       301 g~i~iwd~~~~~  312 (343)
                      |.|++|++++++
T Consensus       331 g~v~~w~~~~g~  342 (343)
T 2xzm_R          331 GVIRTFSFETSA  342 (343)
T ss_dssp             SEEEEEEEEEEE
T ss_pred             ceEEEEEEEccC
Confidence            999999998764

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=100.00  E-value=9e-47  Score=310.87  Aligned_cols=290  Identities=16%  Similarity=0.205  Sum_probs=230.6

Q ss_pred             ccceEEEecCC--------CCeEEEEecCCceEEE---EEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcc--
Q psy10867          3 LLNEVAFSYDG--------SGAISVWEPKGGTLLM---SYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQE--   69 (343)
Q Consensus         3 ~v~~~~~s~~~--------dg~i~iwd~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~--   69 (343)
                      +|..+.|+|++        |+.|+|||+.+++...   ...+|.. .|.+++|+|++.++++++.|+.+++|+...+.  
T Consensus        18 ~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~-~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~   96 (345)
T 3fm0_A           18 RCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQR-TVRKVAWSPCGNYLASASFDATTCIWKKNQDDFE   96 (345)
T ss_dssp             CEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSS-CEEEEEECTTSSEEEEEETTSCEEEEEECCC-EE
T ss_pred             cEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCC-cEEEEEECCCCCEEEEEECCCcEEEEEccCCCeE
Confidence            45555555554        8999999998876432   2367888 99999999999999999999999999987764  


Q ss_pred             cceecccCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCCc---eEEEecccCCCeEEEEEecCCCEEEEecCCCeEEE
Q psy10867         70 KAQLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGR---LLATASSHYQPITIVKWSADSNFIVTGGEDGTICV  145 (343)
Q Consensus        70 ~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~i  145 (343)
                      .+..+.+|...|.+++|+|++++|++ +.|+.|++||+.++.   .+..+.+|...|.+++|+|++++|++++.|+.|++
T Consensus        97 ~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~  176 (345)
T 3fm0_A           97 CVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKL  176 (345)
T ss_dssp             EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEE
T ss_pred             EEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEE
Confidence            45667799999999999999999997 689999999998763   45677899999999999999999999999999999


Q ss_pred             eecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCC--------
Q psy10867        146 WQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTG--------  217 (343)
Q Consensus       146 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~--------  217 (343)
                      ||.+.....                    ....+.+|...|.+++|+|++  ++|++++.|++|++||....        
T Consensus       177 w~~~~~~~~--------------------~~~~~~~h~~~v~~l~~sp~g--~~l~s~s~D~~v~iW~~~~~~~~~~~~~  234 (345)
T 3fm0_A          177 YREEEDDWV--------------------CCATLEGHESTVWSLAFDPSG--QRLASCSDDRTVRIWRQYLPGNEQGVAC  234 (345)
T ss_dssp             EEEETTEEE--------------------EEEEECCCSSCEEEEEECTTS--SEEEEEETTSCEEEEEEECTTCTTCCCC
T ss_pred             EEecCCCEE--------------------EEEEecCCCCceEEEEECCCC--CEEEEEeCCCeEEEeccccCCCCcccee
Confidence            998765321                    345677899999999999999  89999999999999996432        


Q ss_pred             -------ceEEEee--cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEc
Q psy10867        218 -------EDLLSLI--LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCS  288 (343)
Q Consensus       218 -------~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s  288 (343)
                             +++..+.  |...|.+++|+|++..|++++.|+.|++|+............  ........+|...|++++|+
T Consensus       235 ~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~--~~~~~~~~~h~~~V~~v~~~  312 (345)
T 3fm0_A          235 SGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTF--SLTAHLHQAHSQDVNCVAWN  312 (345)
T ss_dssp             C---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCE--EEEEEETTSSSSCEEEEEEC
T ss_pred             eccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeE--EEEeeecccccCcEeEeEEe
Confidence                   1222332  567899999999999999999999999999876432211000  00011235799999999999


Q ss_pred             cCC-CEEEEEeCCCcEEEEecccceeeeec
Q psy10867        289 ITG-ITLLSSSADETLKIWHTISRQCLRTI  317 (343)
Q Consensus       289 ~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~  317 (343)
                      |++ .+||+|+.||.|++|++.+++.+..+
T Consensus       313 p~~~~~laS~s~Dg~v~~W~~~~~~~~~~~  342 (345)
T 3fm0_A          313 PKEPGLLASCSDDGEVAFWKYQRPEGLHHH  342 (345)
T ss_dssp             SSSTTEEEEEETTSCEEEEEECC-------
T ss_pred             CCCceEEEEcCCCCcEEEEEecCCCCcccc
Confidence            987 49999999999999999888765543

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=100.00  E-value=1.7e-46  Score=314.61  Aligned_cols=299  Identities=20%  Similarity=0.244  Sum_probs=244.0

Q ss_pred             eEEEEecCCceE----EEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCC-------------
Q psy10867         16 AISVWEPKGGTL----LMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICP-------------   78 (343)
Q Consensus        16 ~i~iwd~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~-------------   78 (343)
                      ...+|+....+.    +.....|.. .|.+++|+|+|.+++++.+ +.+++|++.+++.+..+..+.             
T Consensus        41 ~~~~~~~~~~~~~~~~~~~~~~h~~-~V~~v~fspdg~~la~g~~-~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~  118 (393)
T 1erj_A           41 YYILYNPALPREIDVELHKSLDHTS-VVCCVKFSNDGEYLATGCN-KTTQVYRVSDGSLVARLSDDSAANKDPENLNTSS  118 (393)
T ss_dssp             CEEEECTTSCCCEEEEEEEEEECSS-CCCEEEECTTSSEEEEECB-SCEEEEETTTCCEEEEECC---------------
T ss_pred             eEEEECCCCCcccCceeEEecCCCC-EEEEEEECCCCCEEEEEcC-CcEEEEEecCCCEEEEecCccccccccccccccc
Confidence            345777654322    122335888 9999999999999999886 899999999888765554332             


Q ss_pred             -----cceEEEEECCCCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccc
Q psy10867         79 -----GRISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLI  152 (343)
Q Consensus        79 -----~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~  152 (343)
                           ..|.+++|+|++++|++ +.|+.|++||+.+++.+..+.+|...|.+++|+|++++|++++.|+.|++||++++.
T Consensus       119 ~~~~~~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~  198 (393)
T 1erj_A          119 SPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQ  198 (393)
T ss_dssp             --CCCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE
T ss_pred             cCCCceeEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCe
Confidence                 24899999999999997 689999999999999999999999999999999999999999999999999999875


Q ss_pred             eeeeeecCCCCCCCCccccccceeeeecccccceEEEEeec-CCCceEEEEeeCCCeEEEEecCCCceEEEe--------
Q psy10867        153 CKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSK-LGAKSRVASVSHDRTCKIFDLCTGEDLLSL--------  223 (343)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~--------  223 (343)
                      ....+                       .+...+.+++++| ++  .++++++.|+.|++||+++++.+..+        
T Consensus       199 ~~~~~-----------------------~~~~~v~~~~~~~~~~--~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~  253 (393)
T 1erj_A          199 CSLTL-----------------------SIEDGVTTVAVSPGDG--KYIAAGSLDRAVRVWDSETGFLVERLDSENESGT  253 (393)
T ss_dssp             EEEEE-----------------------ECSSCEEEEEECSTTC--CEEEEEETTSCEEEEETTTCCEEEEEC------C
T ss_pred             eEEEE-----------------------EcCCCcEEEEEECCCC--CEEEEEcCCCcEEEEECCCCcEEEeecccccCCC
Confidence            43322                       2567799999999 66  89999999999999999999887765        


Q ss_pred             ecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccc-cCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCc
Q psy10867        224 ILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHI-QDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADET  302 (343)
Q Consensus       224 ~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~  302 (343)
                      .|...|.+++|+|++++|++|+.|+.|++||++.......... ....+...+.+|...|.+++|+|++++|++|+.|+.
T Consensus       254 ~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~  333 (393)
T 1erj_A          254 GHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRG  333 (393)
T ss_dssp             CCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSE
T ss_pred             CCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCe
Confidence            2567899999999999999999999999999986543221110 112234467789999999999999999999999999


Q ss_pred             EEEEecccceeeeecc-cCCceEEEEEcc------CCCeeeecccC
Q psy10867        303 LKIWHTISRQCLRTIQ-HKGPVLGAFLGL------LPPAIHDYDFT  341 (343)
Q Consensus       303 i~iwd~~~~~~~~~~~-~~~~v~~~~~sp------~~~~l~~~~~~  341 (343)
                      |++||+.+++++..+. |.+.|.+++|+|      ++++|++++..
T Consensus       334 v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~D  379 (393)
T 1erj_A          334 VLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGD  379 (393)
T ss_dssp             EEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETT
T ss_pred             EEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCC
Confidence            9999999999999998 999999999886      68899998753

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=100.00  E-value=4e-46  Score=305.12  Aligned_cols=292  Identities=18%  Similarity=0.193  Sum_probs=228.6

Q ss_pred             CCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcc--cceec-cc-CCcceEEEEECCCCCEEEE-ec
Q psy10867         23 KGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQE--KAQLR-LI-CPGRISSMQASPDAAYIAV-SI   97 (343)
Q Consensus        23 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~--~~~~~-~~-~~~~v~~~~~s~~~~~l~~-~~   97 (343)
                      .+.+++.++++|.. .|.+++|+|+  ++++++.|+.|++|++..+.  ....+ .. |...|.+++|+|++++|++ +.
T Consensus         2 ~~~~~~~~~~~h~~-~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~   78 (330)
T 2hes_X            2 ASINLIKSLKLYKE-KIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSF   78 (330)
T ss_dssp             -CCEEEEEEECCSS-CEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEET
T ss_pred             cccccceeeccCCC-ceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeC
Confidence            35677889999999 9999999998  78888888999999998753  33333 34 9999999999999999997 68


Q ss_pred             CCeEEEEEccC-------CceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccc
Q psy10867         98 ETKLHMWQISS-------GRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVT  170 (343)
Q Consensus        98 d~~i~v~~~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  170 (343)
                      |+.|++|++..       .+.+..+.+|.+.|.+++|+|++++|++|+.|+.|++||++.....                
T Consensus        79 D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~----------------  142 (330)
T 2hes_X           79 DSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEE----------------  142 (330)
T ss_dssp             TSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCC----------------
T ss_pred             CCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCC----------------
Confidence            99999999853       3466788899999999999999999999999999999999542110                


Q ss_pred             cccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCC--ceEEEee-cCCcEEEEEEcCC--CCEEEEEc
Q psy10867        171 GLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTG--EDLLSLI-LDTRLTCVAFDGT--EDNIYMGT  245 (343)
Q Consensus       171 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~--~~~~~~~-~~~~i~~~~~~~~--~~~l~~~~  245 (343)
                        .+.+..+.+|...|.+++|+|++  .+|++++.|++|++||..++  +++..+. |...|.+++|+|+  +.+|++++
T Consensus       143 --~~~~~~~~~h~~~v~~v~~~p~~--~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s  218 (330)
T 2hes_X          143 --YECISVLQEHSQDVKHVIWHPSE--ALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGS  218 (330)
T ss_dssp             --CEEEEEECCCSSCEEEEEECSSS--SEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEE
T ss_pred             --eEEEEEeccCCCceEEEEECCCC--CEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEe
Confidence              12456678899999999999998  89999999999999998776  4566665 7889999999998  67999999


Q ss_pred             CCCcEEEEEeecccccccccccCCCCCCcccc-ccCcEEEEEEccCCCEEEEEeCCCcEEEEecccce--eeeec-c-cC
Q psy10867        246 SEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIG-HEKQVTSLSCSITGITLLSSSADETLKIWHTISRQ--CLRTI-Q-HK  320 (343)
Q Consensus       246 ~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~--~~~~~-~-~~  320 (343)
                      .|+.|++||+..........   ......+.+ |...|++++|++++ +|++++.||.|++||..+++  .+... . |.
T Consensus       219 ~D~~v~iw~~~~~~~~~~~~---~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~  294 (330)
T 2hes_X          219 DDSTVRVWKYMGDDEDDQQE---WVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKVFAKRALCHG  294 (330)
T ss_dssp             TTSCEEEEEEEEECTTSCEE---EEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEEEEEESCTTT
T ss_pred             CCCeEEEEEecCCCccccce---eEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEEEeccccccc
Confidence            99999999998643211000   001222333 88999999999765 89999999999999998774  33332 3 66


Q ss_pred             C-ceEEEEEcc--CCCeeeecccC
Q psy10867        321 G-PVLGAFLGL--LPPAIHDYDFT  341 (343)
Q Consensus       321 ~-~v~~~~~sp--~~~~l~~~~~~  341 (343)
                      . .|.+++|+|  ++++|++++..
T Consensus       295 ~~~v~~v~~~~~~~~~~las~s~D  318 (330)
T 2hes_X          295 VYEINVVKWLELNGKTILATGGDD  318 (330)
T ss_dssp             TSCEEEEEEC-----CCEEEEETT
T ss_pred             cceEEEEEEecCCCceEEEEecCC
Confidence            6 899999999  78999988753

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=100.00  E-value=7.8e-46  Score=326.38  Aligned_cols=296  Identities=25%  Similarity=0.370  Sum_probs=259.3

Q ss_pred             ccceEEEecCC--------CCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceec
Q psy10867          3 LLNEVAFSYDG--------SGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLR   74 (343)
Q Consensus         3 ~v~~~~~s~~~--------dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~   74 (343)
                      +|.++.|++++        |+.|++||. +++.+..+.+|.. .|.+++|+|++..+++++.|+.|++|+.. ++....+
T Consensus       223 ~v~~~~~s~dg~~l~~~~~d~~i~~w~~-~~~~~~~~~~~~~-~v~~v~~~~d~~~l~~~~~d~~i~~w~~~-~~~~~~~  299 (577)
T 2ymu_A          223 SVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSS-SVNGVAFRPDGQTIASASDDKTVKLWNRN-GQLLQTL  299 (577)
T ss_dssp             CEEEEEECTTSSCEEEEETTSCEEEECT-TSCEEEEECCCSS-CEEEEEECTTSSEEEEEETTSCEEEEETT-SCEEEEE
T ss_pred             CEEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEEecCCC-CEEEEEEcCCCCEEEEEeCCCEEEEEeCC-CcEEEEE
Confidence            45566666554        899999996 6788899999999 99999999999999999988999999975 4556667


Q ss_pred             ccCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccce
Q psy10867         75 LICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLIC  153 (343)
Q Consensus        75 ~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~  153 (343)
                      .+|...|.+++|+|++++|++ +.|+.|++||+. +..+..+.+|...+.+++|+|++++|++++.||.|++||....  
T Consensus       300 ~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~-~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~~~--  376 (577)
T 2ymu_A          300 TGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN-GQHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQ--  376 (577)
T ss_dssp             CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTCC--
T ss_pred             ecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCC-CCeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCCCC--
Confidence            789999999999999999987 688999999975 4556778899999999999999999999999999999996542  


Q ss_pred             eeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEE
Q psy10867        154 KQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCV  232 (343)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~  232 (343)
                                           .+..+.+|...|.+++|+|++  ++|++++.|+.|++||. +++.+..+. |...|.++
T Consensus       377 ---------------------~~~~~~~~~~~v~~~~~s~dg--~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v~~~  432 (577)
T 2ymu_A          377 ---------------------LLQTLTGHSSSVRGVAFSPDG--QTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGV  432 (577)
T ss_dssp             ---------------------EEEEEECCSSCEEEEEECTTS--SCEEEEETTSEEEEECT-TCCEEEEEECCSSCEEEE
T ss_pred             ---------------------EEEEecCCCCCeEEEEECCCC--CEEEEEeCCCEEEEEeC-CCCEEEEecCCCCCeEEE
Confidence                                 556667899999999999999  89999999999999995 566666665 78889999


Q ss_pred             EEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccce
Q psy10867        233 AFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQ  312 (343)
Q Consensus       233 ~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~  312 (343)
                      +|+|++++|++++.|+.|++||...            ..+..+.+|...|++++|+|++++|++++.|+.|++||. +++
T Consensus       433 ~~s~d~~~l~~~~~d~~v~~w~~~~------------~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~  499 (577)
T 2ymu_A          433 AFSPDDQTIASASDDKTVKLWNRNG------------QLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQ  499 (577)
T ss_dssp             EECTTSSEEEEEETTSEEEEEETTS------------CEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSC
T ss_pred             EECCCCCEEEEEcCCCEEEEEECCC------------CEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCC
Confidence            9999999999999999999999643            114567789999999999999999999999999999995 688


Q ss_pred             eeeecc-cCCceEEEEEccCCCeeeecccC
Q psy10867        313 CLRTIQ-HKGPVLGAFLGLLPPAIHDYDFT  341 (343)
Q Consensus       313 ~~~~~~-~~~~v~~~~~sp~~~~l~~~~~~  341 (343)
                      ++..+. |...|++++|+|++++|++++..
T Consensus       500 ~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d  529 (577)
T 2ymu_A          500 LLQTLTGHSSSVRGVAFSPDGQTIASASDD  529 (577)
T ss_dssp             EEEEEECCSSCEEEEEECTTSSCEEEEETT
T ss_pred             EEEEEeCCCCCEEEEEEcCCCCEEEEEECc
Confidence            888888 99999999999999999998753

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=100.00  E-value=1.6e-45  Score=303.29  Aligned_cols=283  Identities=14%  Similarity=0.126  Sum_probs=232.2

Q ss_pred             ceEEEEEecCCCCcceEEEE-----eC-CceEEEEEcCCCeEEEEeCCCc-------ccceecccCCcceEEEEECCCCC
Q psy10867         25 GTLLMSYKGASVLSPHSMCL-----LG-NDYVLGVEKGKPMIQAWPVNSQ-------EKAQLRLICPGRISSMQASPDAA   91 (343)
Q Consensus        25 ~~~~~~~~~~~~~~v~~~~~-----~~-~~~~~~~~~~~~~i~iw~~~~~-------~~~~~~~~~~~~v~~~~~s~~~~   91 (343)
                      .++...+++|.. .|++++|     ++ ++.++++++.|++|++||+...       .....+.+|...|.+++|+|++.
T Consensus        11 ~~~~~~l~gH~~-~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~   89 (343)
T 2xzm_R           11 VVKRGILEGHSD-WVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENC   89 (343)
T ss_dssp             EEEEEEEECCSS-CEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTT
T ss_pred             eeeeeeeccchh-hhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCC
Confidence            345678999999 9999999     66 8999999999999999998754       23455678999999999999999


Q ss_pred             EEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccc
Q psy10867         92 YIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVT  170 (343)
Q Consensus        92 ~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  170 (343)
                      ++++ +.|++|++||+++++.+..+.+|...|.+++|+|++++|++++.|+.|++||+......                
T Consensus        90 ~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~----------------  153 (343)
T 2xzm_R           90 FAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKF----------------  153 (343)
T ss_dssp             EEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEE----------------
T ss_pred             EEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCcee----------------
Confidence            9987 68999999999999999999999999999999999999999999999999999743111                


Q ss_pred             cccceeeeecccccceEEEEeecCCC--------ceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCCEE
Q psy10867        171 GLTEPLHVKSQHSLPVTHVTLSKLGA--------KSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNI  241 (343)
Q Consensus       171 ~~~~~~~~~~~~~~~v~~~~~~~~~~--------~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l  241 (343)
                          .......|...|.+++|+|++.        ..++++++.|+.|++||. ..+....+. |...|.+++|+|++++|
T Consensus       154 ----~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~h~~~v~~~~~s~~g~~l  228 (343)
T 2xzm_R          154 ----SSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAHESNVNHLSISPNGKYI  228 (343)
T ss_dssp             ----ECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEECCSSCEEEEEECTTSSEE
T ss_pred             ----eeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcCccccceEEEECCCCCEE
Confidence                1112236888999999999862        148999999999999994 455555554 78899999999999999


Q ss_pred             EEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeee--ec--
Q psy10867        242 YMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLR--TI--  317 (343)
Q Consensus       242 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~--~~--  317 (343)
                      ++|+.|+.|++||+......          .. ...+...|.+++|+|++++++++ .|+.|++||+.+++...  .+  
T Consensus       229 ~sgs~dg~v~iwd~~~~~~~----------~~-~~~~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~~~~~~~~~~  296 (343)
T 2xzm_R          229 ATGGKDKKLLIWDILNLTYP----------QR-EFDAGSTINQIAFNPKLQWVAVG-TDQGVKIFNLMTQSKAPVCTIEA  296 (343)
T ss_dssp             EEEETTCEEEEEESSCCSSC----------SE-EEECSSCEEEEEECSSSCEEEEE-ESSCEEEEESSSCCSCSEEECCC
T ss_pred             EEEcCCCeEEEEECCCCccc----------ce-eecCCCcEEEEEECCCCCEEEEE-CCCCEEEEEeCCCCCCceEEeec
Confidence            99999999999998543221          11 12345679999999999877655 57889999998776543  22  


Q ss_pred             ----------ccCCceEEEEEccCCCeeeecccC
Q psy10867        318 ----------QHKGPVLGAFLGLLPPAIHDYDFT  341 (343)
Q Consensus       318 ----------~~~~~v~~~~~sp~~~~l~~~~~~  341 (343)
                                .|...|.+++|+|+|++|++++..
T Consensus       297 ~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~D  330 (343)
T 2xzm_R          297 EPITKAEGQKGKNPQCTSLAWNALGKKLFAGFTD  330 (343)
T ss_dssp             CSGGGBTTBCCSCCCEEEEEECSSSCCEEEEETT
T ss_pred             CcchhhhhhcCCCCceEEEEECCCCCeEEEecCC
Confidence                      256779999999999999998753

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=100.00  E-value=6.5e-46  Score=311.13  Aligned_cols=281  Identities=20%  Similarity=0.280  Sum_probs=234.8

Q ss_pred             cccceEEEecCC-------CCeEEEEecCCceEEEEEecCCC-----------------CcceEEEEeCCceEEEEEcCC
Q psy10867          2 SLLNEVAFSYDG-------SGAISVWEPKGGTLLMSYKGASV-----------------LSPHSMCLLGNDYVLGVEKGK   57 (343)
Q Consensus         2 ~~v~~~~~s~~~-------dg~i~iwd~~~~~~~~~~~~~~~-----------------~~v~~~~~~~~~~~~~~~~~~   57 (343)
                      ..|.++.|++++       ++.+++|++.+++.+..+..+..                 ..|.+++|+|++.++++++.|
T Consensus        65 ~~V~~v~fspdg~~la~g~~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s~~~d  144 (393)
T 1erj_A           65 SVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAED  144 (393)
T ss_dssp             SCCCEEEECTTSSEEEEECBSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEEETT
T ss_pred             CEEEEEEECCCCCEEEEEcCCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEEEcCC
Confidence            357788888887       57899999999999888876542                 138999999999999999999


Q ss_pred             CeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEec-CCCEEE
Q psy10867         58 PMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSA-DSNFIV  135 (343)
Q Consensus        58 ~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~  135 (343)
                      +.|++||+.+++.+..+.+|...|.+++|+|++++|++ +.|+.|++||+++++....+. +...+.+++|+| ++++|+
T Consensus       145 ~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~  223 (393)
T 1erj_A          145 RLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS-IEDGVTTVAVSPGDGKYIA  223 (393)
T ss_dssp             SCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSTTCCEEE
T ss_pred             CeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE-cCCCcEEEEEECCCCCEEE
Confidence            99999999999988888899999999999999999887 689999999999998877775 556799999999 899999


Q ss_pred             EecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecC
Q psy10867        136 TGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLC  215 (343)
Q Consensus       136 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~  215 (343)
                      +|+.||.|++||++++.....+.               .......+|...|.+++|+|++  .+|++++.|+.|++||++
T Consensus       224 ~~s~d~~v~iwd~~~~~~~~~~~---------------~~~~~~~~h~~~v~~v~~~~~g--~~l~s~s~d~~v~~wd~~  286 (393)
T 1erj_A          224 AGSLDRAVRVWDSETGFLVERLD---------------SENESGTGHKDSVYSVVFTRDG--QSVVSGSLDRSVKLWNLQ  286 (393)
T ss_dssp             EEETTSCEEEEETTTCCEEEEEC---------------------CCCSSCEEEEEECTTS--SEEEEEETTSEEEEEEC-
T ss_pred             EEcCCCcEEEEECCCCcEEEeec---------------ccccCCCCCCCCEEEEEECCCC--CEEEEEeCCCEEEEEECC
Confidence            99999999999999876544332               0112235799999999999999  899999999999999997


Q ss_pred             CCc------------eEEEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcE
Q psy10867        216 TGE------------DLLSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQV  282 (343)
Q Consensus       216 ~~~------------~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v  282 (343)
                      +..            +...+. |...|.+++|+|++.+|++|+.|+.|++||+.+...           +..+.+|...|
T Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~-----------~~~l~~h~~~v  355 (393)
T 1erj_A          287 NANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNP-----------LLMLQGHRNSV  355 (393)
T ss_dssp             --------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCE-----------EEEEECCSSCE
T ss_pred             CCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeE-----------EEEECCCCCCE
Confidence            643            233333 677899999999999999999999999999876543           45678999999


Q ss_pred             EEEEEcc------CCCEEEEEeCCCcEEEEecccc
Q psy10867        283 TSLSCSI------TGITLLSSSADETLKIWHTISR  311 (343)
Q Consensus       283 ~~~~~s~------~~~~l~s~~~dg~i~iwd~~~~  311 (343)
                      .+++|++      ++++|++|+.||.|++|++...
T Consensus       356 ~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~~  390 (393)
T 1erj_A          356 ISVAVANGSSLGPEYNVFATGSGDCKARIWKYKKI  390 (393)
T ss_dssp             EEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEEC
T ss_pred             EEEEecCCcCcCCCCCEEEEECCCCcEEECccccc
Confidence            9999986      6889999999999999998653

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=100.00  E-value=3.5e-45  Score=297.71  Aligned_cols=272  Identities=20%  Similarity=0.363  Sum_probs=236.8

Q ss_pred             ccceEEEecCC--------CCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceec
Q psy10867          3 LLNEVAFSYDG--------SGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLR   74 (343)
Q Consensus         3 ~v~~~~~s~~~--------dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~   74 (343)
                      +|.++.|++++        ||.|++|+..+++....+.+|.. .|.+++|+|++.++++++.|+.|++||+.+++.+..+
T Consensus        25 ~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~  103 (312)
T 4ery_A           25 AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKL-GISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL  103 (312)
T ss_dssp             CEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSS-CEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred             cEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCC-ceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEE
Confidence            45555555554        89999999999999999999999 9999999999999999999999999999999988888


Q ss_pred             ccCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccce
Q psy10867         75 LICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLIC  153 (343)
Q Consensus        75 ~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~  153 (343)
                      ..|...|.+++|+|++++|++ +.|+.|++||+++++.+..+..|..+|.+++|+|++++|++++.||.|++||+++++.
T Consensus       104 ~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~  183 (312)
T 4ery_A          104 KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQC  183 (312)
T ss_dssp             ECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE
T ss_pred             cCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCce
Confidence            899999999999999999997 6899999999999999999999999999999999999999999999999999988654


Q ss_pred             eeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCc---E
Q psy10867        154 KQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTR---L  229 (343)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~---i  229 (343)
                      ...                     ....+...+..++|+|++  .++++++.|+.|++||+++++.+..+. +...   +
T Consensus       184 ~~~---------------------~~~~~~~~~~~~~~~~~~--~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~  240 (312)
T 4ery_A          184 LKT---------------------LIDDDNPPVSFVKFSPNG--KYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCI  240 (312)
T ss_dssp             EEE---------------------ECCSSCCCEEEEEECTTS--SEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCC
T ss_pred             eeE---------------------EeccCCCceEEEEECCCC--CEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEE
Confidence            332                     223466789999999999  899999999999999999999888776 3322   2


Q ss_pred             EEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEe--CCCcEEEEe
Q psy10867        230 TCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSS--ADETLKIWH  307 (343)
Q Consensus       230 ~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~--~dg~i~iwd  307 (343)
                      ......+++.+|++|+.||.|++||+.+...           +..+.+|...|.+++|+|++++|++++  .|+.|++|+
T Consensus       241 ~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~-----------~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~  309 (312)
T 4ery_A          241 FANFSVTGGKWIVSGSEDNLVYIWNLQTKEI-----------VQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWK  309 (312)
T ss_dssp             CEEEECSSSCEEEECCTTSCEEEEETTTCCE-----------EEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEE
T ss_pred             EEEEEeCCCcEEEEECCCCEEEEEECCCchh-----------hhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEec
Confidence            3333446788999999999999999987543           456788999999999999999999987  699999998


Q ss_pred             cc
Q psy10867        308 TI  309 (343)
Q Consensus       308 ~~  309 (343)
                      .+
T Consensus       310 ~d  311 (312)
T 4ery_A          310 SD  311 (312)
T ss_dssp             CC
T ss_pred             CC
Confidence            64

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1e-45  Score=302.67  Aligned_cols=274  Identities=15%  Similarity=0.150  Sum_probs=216.6

Q ss_pred             EEEecCCCCeEEEEecCCc--eEEEEE-ec-CCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCC-------cccceecc
Q psy10867          7 VAFSYDGSGAISVWEPKGG--TLLMSY-KG-ASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNS-------QEKAQLRL   75 (343)
Q Consensus         7 ~~~s~~~dg~i~iwd~~~~--~~~~~~-~~-~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~-------~~~~~~~~   75 (343)
                      ++++++.|+.|++||+.++  +.+..+ .+ |.. .|.+++|+|++.++++++.|++|++|++..       .+....+.
T Consensus        26 ~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~-~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~  104 (330)
T 2hes_X           26 ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKK-AIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIE  104 (330)
T ss_dssp             EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCS-CEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC
T ss_pred             EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccC-CEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEc
Confidence            5667778999999999875  456666 44 888 999999999999999999999999999853       23445667


Q ss_pred             cCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCC----ceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCc
Q psy10867         76 ICPGRISSMQASPDAAYIAV-SIETKLHMWQISSG----RLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSR  150 (343)
Q Consensus        76 ~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~  150 (343)
                      +|...|.+++|+|++++|++ +.|+.|++||+...    +++..+.+|...|.+++|+|++++|++++.|+.|++||..+
T Consensus       105 ~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~  184 (330)
T 2hes_X          105 GHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYD  184 (330)
T ss_dssp             ----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEET
T ss_pred             CCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCC
Confidence            89999999999999999997 68999999999432    46678889999999999999999999999999999999875


Q ss_pred             cceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCC--------ceEEE
Q psy10867        151 LICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTG--------EDLLS  222 (343)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~--------~~~~~  222 (343)
                      ...                    +.+..+.+|...|.+++|+|++...+|++++.|++|++||++.+        .....
T Consensus       185 ~~~--------------------~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~  244 (330)
T 2hes_X          185 DDW--------------------ECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAI  244 (330)
T ss_dssp             TEE--------------------EEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEE
T ss_pred             CCe--------------------eEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeee
Confidence            421                    25667789999999999999843278999999999999998765        23333


Q ss_pred             ee--cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccC-cEEEEEEcc--CCCEEEEE
Q psy10867        223 LI--LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEK-QVTSLSCSI--TGITLLSS  297 (343)
Q Consensus       223 ~~--~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~s~--~~~~l~s~  297 (343)
                      +.  |...|.+++|++++ +|++++.||.|++||.........        .....+|.. .|.+++|+|  ++++|++|
T Consensus       245 ~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~--------~~~~~~h~~~~v~~v~~~~~~~~~~las~  315 (330)
T 2hes_X          245 LPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKVF--------AKRALCHGVYEINVVKWLELNGKTILATG  315 (330)
T ss_dssp             CCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEEE--------EEESCTTTTSCEEEEEEC-----CCEEEE
T ss_pred             cccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEEE--------eccccccccceEEEEEEecCCCceEEEEe
Confidence            33  67789999999765 899999999999999875421000        112346776 899999999  78999999


Q ss_pred             eCCCcEEEEeccc
Q psy10867        298 SADETLKIWHTIS  310 (343)
Q Consensus       298 ~~dg~i~iwd~~~  310 (343)
                      +.||.|++||+++
T Consensus       316 s~Dg~v~~W~~~~  328 (330)
T 2hes_X          316 GDDGIVNFWSLEK  328 (330)
T ss_dssp             ETTSEEEEEEC--
T ss_pred             cCCCcEEEEEecc
Confidence            9999999999864

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.5e-45  Score=312.42  Aligned_cols=296  Identities=13%  Similarity=0.151  Sum_probs=252.4

Q ss_pred             EEEecCCCCeEEEEec----CCce------EEEEEec----------CCCCcceEEEEeCCceEEEEEcCCCeEEEEeCC
Q psy10867          7 VAFSYDGSGAISVWEP----KGGT------LLMSYKG----------ASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVN   66 (343)
Q Consensus         7 ~~~s~~~dg~i~iwd~----~~~~------~~~~~~~----------~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~   66 (343)
                      ++++++.||.|++||+    .+++      ....+..          |.. .|.+++|+|++.++++++.||.|++|+ .
T Consensus        60 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~s~~~~~l~~~~~dg~i~i~~-~  137 (425)
T 1r5m_A           60 ILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTN-QVTCLAWSHDGNSIVTGVENGELRLWN-K  137 (425)
T ss_dssp             EEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CB-CEEEEEECTTSSEEEEEETTSCEEEEE-T
T ss_pred             EEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCC-ceEEEEEcCCCCEEEEEeCCCeEEEEe-C
Confidence            3444444699999999    8888      5555555          677 999999999999999999889999999 5


Q ss_pred             CcccceecccCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCCceEEEecccCCC---------------eEEEEEecC
Q psy10867         67 SQEKAQLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQP---------------ITIVKWSAD  130 (343)
Q Consensus        67 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~---------------v~~~~~~~~  130 (343)
                      +++....+..|...|.+++|+|++++|++ +.|+.|++||+.+++.+..+..+...               +.+++|+|+
T Consensus       138 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (425)
T 1r5m_A          138 TGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDD  217 (425)
T ss_dssp             TSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEET
T ss_pred             CCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCC
Confidence            56667777789999999999999998887 68999999999999999988887776               999999987


Q ss_pred             CCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEE
Q psy10867        131 SNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCK  210 (343)
Q Consensus       131 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~  210 (343)
                      + .+++++.+|.|++||+++..                      ....+..|...|.+++|+|++  .+|++++.|+.|+
T Consensus       218 ~-~~~~~~~~g~i~~~d~~~~~----------------------~~~~~~~~~~~i~~~~~~~~~--~~l~~~~~d~~i~  272 (425)
T 1r5m_A          218 D-KFVIPGPKGAIFVYQITEKT----------------------PTGKLIGHHGPISVLEFNDTN--KLLLSASDDGTLR  272 (425)
T ss_dssp             T-EEEEECGGGCEEEEETTCSS----------------------CSEEECCCSSCEEEEEEETTT--TEEEEEETTSCEE
T ss_pred             C-EEEEEcCCCeEEEEEcCCCc----------------------eeeeeccCCCceEEEEECCCC--CEEEEEcCCCEEE
Confidence            5 58889999999999998863                      445556799999999999998  7999999999999


Q ss_pred             EEecCCCceEEEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEcc
Q psy10867        211 IFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSI  289 (343)
Q Consensus       211 ~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~  289 (343)
                      +||+++++.+..+. +...+.+++|+|++ ++++++.|+.|++||++....           +..+..|...|.+++|+|
T Consensus       273 i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~-----------~~~~~~~~~~i~~~~~s~  340 (425)
T 1r5m_A          273 IWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTL-----------LALSIVDGVPIFAGRISQ  340 (425)
T ss_dssp             EECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEE-----------EEEEECTTCCEEEEEECT
T ss_pred             EEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcE-----------eEecccCCccEEEEEEcC
Confidence            99999999888886 78899999999999 999999999999999976543           445667889999999999


Q ss_pred             CCCEEEEEeCCCcEEEEecccce--------------------eeeecc-cCC--ceEEEEEccCCCeeeecccC
Q psy10867        290 TGITLLSSSADETLKIWHTISRQ--------------------CLRTIQ-HKG--PVLGAFLGLLPPAIHDYDFT  341 (343)
Q Consensus       290 ~~~~l~s~~~dg~i~iwd~~~~~--------------------~~~~~~-~~~--~v~~~~~sp~~~~l~~~~~~  341 (343)
                      ++++|++++.||.|++||+.+++                    .+..+. |..  .|++++|+|++++|++++..
T Consensus       341 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d  415 (425)
T 1r5m_A          341 DGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSL  415 (425)
T ss_dssp             TSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESS
T ss_pred             CCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecC
Confidence            99999999999999999999988                    888888 655  99999999999999988754

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=100.00  E-value=2.5e-45  Score=310.91  Aligned_cols=315  Identities=13%  Similarity=0.116  Sum_probs=249.0

Q ss_pred             EecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECC
Q psy10867          9 FSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASP   88 (343)
Q Consensus         9 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~   88 (343)
                      ++++.||.|++||+.+++....+..+.  .+....++|++.++++++.||.|++||+.+++....+..|...|.+++|+|
T Consensus        72 ~~~~~d~~v~i~d~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~  149 (420)
T 3vl1_A           72 YKARLDGHDFLFNTIIRDGSKMLKRAD--YTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFP  149 (420)
T ss_dssp             EEEEETTEEEEEECCSEETTTTSCSCC--EEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECT
T ss_pred             EEEEcCCcEEEEEecccceeeEEecCC--ceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECC
Confidence            334448999999999888777777663  566667899999999999999999999999988888789999999999999


Q ss_pred             CCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCC
Q psy10867         89 DAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGK  167 (343)
Q Consensus        89 ~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~  167 (343)
                      ++++|++ +.|+.|++||+.+++.+..+.+|...|.+++|+|++++|++++.||.|++||+++++....+..........
T Consensus       150 ~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v  229 (420)
T 3vl1_A          150 SGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGV  229 (420)
T ss_dssp             TSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCE
T ss_pred             CCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCc
Confidence            9998887 689999999999999999999999999999999999999999999999999999887666553211000000


Q ss_pred             cc--ccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee--cCCcEEEEEEcCCCC-EEE
Q psy10867        168 GV--TGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI--LDTRLTCVAFDGTED-NIY  242 (343)
Q Consensus       168 ~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~--~~~~i~~~~~~~~~~-~l~  242 (343)
                      ..  ............+...+.+++|+|++  .++++++.||.|++||+++++....+.  +...+.+++|+|+++ +|+
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~--~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~  307 (420)
T 3vl1_A          230 NSIALFVGTDRQLHEISTSKKNNLEFGTYG--KYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIY  307 (420)
T ss_dssp             EEEEEEECCCSSCGGGCCCCCCTTCSSCTT--EEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEE
T ss_pred             cEEEEecCCcceeeecccCcccceEEcCCC--CEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEE
Confidence            00  00000000112244667777788888  899999999999999999998887775  567899999999999 999


Q ss_pred             EEcCCCcEEEEEeecccccccccccCCCCCCcccc-ccCcEEEEEEccCCCEEEEEeCCCcEEEEecccce---------
Q psy10867        243 MGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIG-HEKQVTSLSCSITGITLLSSSADETLKIWHTISRQ---------  312 (343)
Q Consensus       243 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~---------  312 (343)
                      +|+.||.|++||+++....          +..+.. |...+.++.+ +++++|++++.|+.|++|++...+         
T Consensus       308 ~g~~dg~i~vwd~~~~~~~----------~~~~~~~~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~  376 (420)
T 3vl1_A          308 AGYENGMLAQWDLRSPECP----------VGEFLINEGTPINNVYF-AAGALFVSSGFDTSIKLDIISDPESERPAIEFE  376 (420)
T ss_dssp             EEETTSEEEEEETTCTTSC----------SEEEEESTTSCEEEEEE-ETTEEEEEETTTEEEEEEEECCTTCCSCEECTT
T ss_pred             EEeCCCeEEEEEcCCCcCc----------hhhhhccCCCCceEEEe-CCCCEEEEecCCccEEEEeccCCCCCccceecc
Confidence            9999999999999875432          334555 6677888855 578899999999999999987632         


Q ss_pred             -eeeecccCCceEEEEEccCCC---eeeec
Q psy10867        313 -CLRTIQHKGPVLGAFLGLLPP---AIHDY  338 (343)
Q Consensus       313 -~~~~~~~~~~v~~~~~sp~~~---~l~~~  338 (343)
                       ......+.+.|.+++|+|+++   .|+++
T Consensus       377 ~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~  406 (420)
T 3vl1_A          377 TPTFLVSNDDAVSQFCYVSDDESNGEVLEV  406 (420)
T ss_dssp             SCEEECCSSCCCCEEEEECCSSSSCEEEEE
T ss_pred             CccEEccCCcceEEEEEccCCCCcceEEEE
Confidence             112223778999999999999   44444

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=100.00  E-value=8.5e-45  Score=305.47  Aligned_cols=276  Identities=17%  Similarity=0.288  Sum_probs=236.9

Q ss_pred             EEecCCCCeEEEEecCCceEEEEEec-CCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEE
Q psy10867          8 AFSYDGSGAISVWEPKGGTLLMSYKG-ASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQA   86 (343)
Q Consensus         8 ~~s~~~dg~i~iwd~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~   86 (343)
                      +++++.||.|++||+.+++....+.. |.. .|.+++|+|++.++++++.||.|++||+.+++.+..+..|...|.+++|
T Consensus       106 l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~-~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~  184 (401)
T 4aez_A          106 VVAVALERNVYVWNADSGSVSALAETDEST-YVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSW  184 (401)
T ss_dssp             EEEEEETTEEEEEETTTCCEEEEEECCTTC-CEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE
T ss_pred             EEEEECCCeEEEeeCCCCcEeEeeecCCCC-CEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEE
Confidence            34555689999999999999888877 566 9999999999999999998899999999999988888899999999999


Q ss_pred             CCCCCEEEE-ecCCeEEEEEcc-CCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCC
Q psy10867         87 SPDAAYIAV-SIETKLHMWQIS-SGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGS  164 (343)
Q Consensus        87 s~~~~~l~~-~~d~~i~v~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~  164 (343)
                      +  +++|++ +.|+.|++||++ .+..+..+.+|.+.|.+++|+|++++|++++.||.|++||+++..            
T Consensus       185 ~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~------------  250 (401)
T 4aez_A          185 N--RHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSI------------  250 (401)
T ss_dssp             E--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSS------------
T ss_pred             C--CCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCC------------
Confidence            4  567776 789999999998 567788889999999999999999999999999999999998853            


Q ss_pred             CCCccccccceeeeecccccceEEEEeecCCCceEEEEee--CCCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEE
Q psy10867        165 SGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVS--HDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIY  242 (343)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~--~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~  242 (343)
                                +...+..|...|.+++|+|++. .++++++  .|+.|++||+++++.+..+.+...+.+++|+|++++++
T Consensus       251 ----------~~~~~~~~~~~v~~~~~~p~~~-~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~  319 (401)
T 4aez_A          251 ----------PKFTKTNHNAAVKAVAWCPWQS-NLLATGGGTMDKQIHFWNAATGARVNTVDAGSQVTSLIWSPHSKEIM  319 (401)
T ss_dssp             ----------EEEEECCCSSCCCEEEECTTST-TEEEEECCTTTCEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEE
T ss_pred             ----------ccEEecCCcceEEEEEECCCCC-CEEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEEECCCCCeEE
Confidence                      4555667999999999999875 5777765  79999999999999999999999999999999999999


Q ss_pred             E--EcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc
Q psy10867        243 M--GTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ  318 (343)
Q Consensus       243 ~--~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~  318 (343)
                      +  |+.||.|++||+.......         ...+.+|...|.+++|+|++++|++++.||.|++||+.+++.+....
T Consensus       320 ~~~g~~dg~i~v~~~~~~~~~~---------~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~~~~~  388 (401)
T 4aez_A          320 STHGFPDNNLSIWSYSSSGLTK---------QVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGDHVKRPI  388 (401)
T ss_dssp             EEECTTTCEEEEEEEETTEEEE---------EEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC--------
T ss_pred             EEeecCCCcEEEEecCCcccee---------EEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCccccccc
Confidence            9  5589999999998743322         33467899999999999999999999999999999999998776654

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=100.00  E-value=4.2e-46  Score=315.18  Aligned_cols=305  Identities=9%  Similarity=0.100  Sum_probs=251.2

Q ss_pred             EEEec----------CCCCeEEEEecCCce---EEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCC----cc
Q psy10867          7 VAFSY----------DGSGAISVWEPKGGT---LLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNS----QE   69 (343)
Q Consensus         7 ~~~s~----------~~dg~i~iwd~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~----~~   69 (343)
                      +++++          +.|+.|++||+.+++   .+..+ .|.. .|.+++|+|++.++++++.||.|++|++.+    .+
T Consensus        27 ~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~-~~~~-~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~  104 (416)
T 2pm9_A           27 LLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASL-QVDS-KFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAIN  104 (416)
T ss_dssp             EEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCC-CCSS-CEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCC
T ss_pred             EEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEE-ecCC-ceEEEEECCCCCeEEEEccCCeEEEeeccccccccc
Confidence            67777          778899999998875   33334 4666 999999999999999998889999999987    34


Q ss_pred             cceecccCCcceEEEEECCC-CCEEEE-ecCCeEEEEEccCCc------eEE---EecccCCCeEEEEEecC-CCEEEEe
Q psy10867         70 KAQLRLICPGRISSMQASPD-AAYIAV-SIETKLHMWQISSGR------LLA---TASSHYQPITIVKWSAD-SNFIVTG  137 (343)
Q Consensus        70 ~~~~~~~~~~~v~~~~~s~~-~~~l~~-~~d~~i~v~~~~~~~------~~~---~~~~~~~~v~~~~~~~~-~~~l~s~  137 (343)
                      ....+..|...|.+++|+|+ +++|++ +.|+.|++||+.+++      ...   .+..|...|.+++|+|+ +.+|+++
T Consensus       105 ~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~  184 (416)
T 2pm9_A          105 SMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASA  184 (416)
T ss_dssp             EEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEE
T ss_pred             chhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEE
Confidence            56677789999999999998 788887 679999999999876      332   34678999999999998 7899999


Q ss_pred             cCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCC---eEEEEec
Q psy10867        138 GEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDR---TCKIFDL  214 (343)
Q Consensus       138 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~---~i~~wd~  214 (343)
                      +.||.|++||+++.+....+.                ......+|...|.+++|+|++. .++++++.|+   .|++||+
T Consensus       185 ~~dg~v~iwd~~~~~~~~~~~----------------~~~~~~~~~~~v~~~~~~~~~~-~~l~~~~~d~~~~~i~~~d~  247 (416)
T 2pm9_A          185 GSSNFASIWDLKAKKEVIHLS----------------YTSPNSGIKQQLSVVEWHPKNS-TRVATATGSDNDPSILIWDL  247 (416)
T ss_dssp             SSSSCEEEEETTTTEEEEEEC----------------CCCCSSCCCCCEEEEEECSSCT-TEEEEEECCSSSCCCCEEET
T ss_pred             cCCCCEEEEECCCCCcceEEe----------------ccccccccCCceEEEEECCCCC-CEEEEEECCCCCceEEEEeC
Confidence            999999999999876544332                1011123378999999999974 6899999998   9999999


Q ss_pred             CCC-ceEEEee--cCCcEEEEEEcC-CCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccC
Q psy10867        215 CTG-EDLLSLI--LDTRLTCVAFDG-TEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSIT  290 (343)
Q Consensus       215 ~~~-~~~~~~~--~~~~i~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~  290 (343)
                      +++ +....+.  |...+.+++|+| ++++|++++.|+.|++||+++...           +..+.+|...|++++|+|+
T Consensus       248 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~-----------~~~~~~~~~~v~~~~~s~~  316 (416)
T 2pm9_A          248 RNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQ-----------LSQFPARGNWCFKTKFAPE  316 (416)
T ss_dssp             TSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCE-----------EEEEECSSSCCCCEEECTT
T ss_pred             CCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCcc-----------ceeecCCCCceEEEEECCC
Confidence            986 5555565  778899999999 999999999999999999987543           4567789999999999999


Q ss_pred             C-CEEEEEeCCCcEEEEecccceeeeec-----------------------------------c-cCCceEEEEEccCCC
Q psy10867        291 G-ITLLSSSADETLKIWHTISRQCLRTI-----------------------------------Q-HKGPVLGAFLGLLPP  333 (343)
Q Consensus       291 ~-~~l~s~~~dg~i~iwd~~~~~~~~~~-----------------------------------~-~~~~v~~~~~sp~~~  333 (343)
                      + ++|++++.|+.|++||+.+++.....                                   . +..++.+++|+|+|+
T Consensus       317 ~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~  396 (416)
T 2pm9_A          317 APDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGK  396 (416)
T ss_dssp             CTTEEEECCSSSEEEEEESCCCCCSSCC----------------------CCSCCCSSCCCCCSTTCCCSCCCEEETTTE
T ss_pred             CCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccccCCccccCCccceEEeeCCe
Confidence            9 89999999999999999876543221                                   1 456778999999999


Q ss_pred             eeeecccC
Q psy10867        334 AIHDYDFT  341 (343)
Q Consensus       334 ~l~~~~~~  341 (343)
                      +|++++..
T Consensus       397 ~la~~~~d  404 (416)
T 2pm9_A          397 LVQITPDG  404 (416)
T ss_dssp             EECBCTTS
T ss_pred             EEEEeCCC
Confidence            99998743

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=100.00  E-value=8.7e-44  Score=301.03  Aligned_cols=282  Identities=21%  Similarity=0.353  Sum_probs=235.2

Q ss_pred             CCeEEEEecCCceEEEEEe--cCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCC
Q psy10867         14 SGAISVWEPKGGTLLMSYK--GASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAA   91 (343)
Q Consensus        14 dg~i~iwd~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~   91 (343)
                      |++|+|||..+|+.+..+.  +|.. .|++++|+|+|.++++|+.||.|++||+++++.+..+.+|...+.+++++  +.
T Consensus       124 d~tV~lWd~~tg~~~~~~~~~~~~~-~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~--~~  200 (420)
T 4gga_A          124 DNSVYLWSASSGDILQLLQMEQPGE-YISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWN--SY  200 (420)
T ss_dssp             TTEEEEEETTTCCEEEEEECCSTTC-CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TT
T ss_pred             CCEEEEEECCCCCEEEEEEecCCCC-cEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeC--CC
Confidence            8999999999999887765  4566 89999999999999999999999999999999998888999999998874  66


Q ss_pred             EEEE-ecCCeEEEEEccCC-ceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCcc
Q psy10867         92 YIAV-SIETKLHMWQISSG-RLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGV  169 (343)
Q Consensus        92 ~l~~-~~d~~i~v~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~  169 (343)
                      +|++ +.|+.+++||.... ..+..+.+|...+..+.|+|+++++++++.|+.+++|+...+....              
T Consensus       201 ~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~--------------  266 (420)
T 4gga_A          201 ILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGW--------------  266 (420)
T ss_dssp             EEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCS--------------
T ss_pred             EEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccc--------------
Confidence            7776 68999999998765 5567888999999999999999999999999999999998764322              


Q ss_pred             ccccceeeeecccccceEEEEeecCCCceEEEE--eeCCCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEc--
Q psy10867        170 TGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVAS--VSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGT--  245 (343)
Q Consensus       170 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~--~~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~--  245 (343)
                          ..+.....|...|.+++|+|.+. .++++  |+.|++|++||+++++....+.....+.++.|+|+++.+++++  
T Consensus       267 ----~~~~~~~~~~~~V~~~~~~p~~~-~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~  341 (420)
T 4gga_A          267 ----VPLQTFTQHQGAVKAVAWCPWQS-NVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGF  341 (420)
T ss_dssp             ----CCSEEECCCSSCEEEEEECTTCT-TEEEEEECTTTCEEEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECT
T ss_pred             ----eeeeeecccCCceeeeeeCCCcc-cEEEEEeecCCCEEEEEeCCccccceeeccccceeeeeecCCCCeEEEEEec
Confidence                24556678999999999999875 55554  4679999999999999999999999999999999999988764  


Q ss_pred             CCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc-cCCceE
Q psy10867        246 SEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVL  324 (343)
Q Consensus       246 ~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~  324 (343)
                      .|+.|++||+.+...           +..+.+|.+.|++++|+|||++|++|+.|++|++||+....+....+ +...+.
T Consensus       342 ~d~~I~iwd~~~~~~-----------v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~~~~~~~~~~~~~~  410 (420)
T 4gga_A          342 AQNQLVIWKYPTMAK-----------VAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFELDPARRREREKASAA  410 (420)
T ss_dssp             TTCCEEEEETTTCCE-----------EEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCSSCC-----------
T ss_pred             CCCEEEEEECCCCcE-----------EEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCCccchhhhccCCcc
Confidence            799999999987543           55688999999999999999999999999999999998776665555 444433


Q ss_pred             EEEE
Q psy10867        325 GAFL  328 (343)
Q Consensus       325 ~~~~  328 (343)
                      ...|
T Consensus       411 ~~s~  414 (420)
T 4gga_A          411 KSSL  414 (420)
T ss_dssp             ----
T ss_pred             cccc
Confidence            3333

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=100.00  E-value=2.2e-43  Score=290.58  Aligned_cols=284  Identities=16%  Similarity=0.166  Sum_probs=243.2

Q ss_pred             CCceEEEEEecCCCCcceEEEEeCC-ceEEEEEcCCCeEEEEeCCCccc-----ceecccCCcceEEEEECCCCCEEEE-
Q psy10867         23 KGGTLLMSYKGASVLSPHSMCLLGN-DYVLGVEKGKPMIQAWPVNSQEK-----AQLRLICPGRISSMQASPDAAYIAV-   95 (343)
Q Consensus        23 ~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~i~iw~~~~~~~-----~~~~~~~~~~v~~~~~s~~~~~l~~-   95 (343)
                      ++.++..+|++|.+ .|++++|+|+ +.+|++++.|++|+|||+.+.+.     ...+.+|...|.+++|+|++++|++ 
T Consensus        26 ~~~~l~~tL~GH~~-~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~  104 (340)
T 4aow_A           26 EQMTLRGTLKGHNG-WVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSG  104 (340)
T ss_dssp             CEEEEEEEECCCSS-CEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred             CceEEEEEECCccC-CEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEE
Confidence            44566778999999 9999999997 68999999899999999876543     3556789999999999999999997 


Q ss_pred             ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccce
Q psy10867         96 SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEP  175 (343)
Q Consensus        96 ~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (343)
                      +.|+.|++|+............+...+..+.+++++++|++++.|+.+++||+.....                     .
T Consensus       105 ~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~---------------------~  163 (340)
T 4aow_A          105 SWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCK---------------------Y  163 (340)
T ss_dssp             ETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEE---------------------E
T ss_pred             cccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCce---------------------E
Confidence            6899999999999988888888889999999999999999999999999999876532                     3


Q ss_pred             eeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEE
Q psy10867        176 LHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFC  254 (343)
Q Consensus       176 ~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d  254 (343)
                      .....+|...+..++|++++...++++++.|+.|++||+++++.+..+. |...|.+++|+|++++|++|+.|+.|++||
T Consensus       164 ~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd  243 (340)
T 4aow_A          164 TVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWD  243 (340)
T ss_dssp             EECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEE
T ss_pred             EEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence            3445678999999999988765788999999999999999999888876 788999999999999999999999999999


Q ss_pred             eecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc----------cCCceE
Q psy10867        255 LRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ----------HKGPVL  324 (343)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~----------~~~~v~  324 (343)
                      ++.....           ..+. +...+.+++|+|++. +++++.|+.|++||++++..+..+.          |...|+
T Consensus       244 ~~~~~~~-----------~~~~-~~~~v~~~~~~~~~~-~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~  310 (340)
T 4aow_A          244 LNEGKHL-----------YTLD-GGDIINALCFSPNRY-WLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCT  310 (340)
T ss_dssp             TTTTEEE-----------EEEE-CSSCEEEEEECSSSS-EEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEE
T ss_pred             eccCcee-----------eeec-CCceEEeeecCCCCc-eeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEE
Confidence            9875443           2233 456799999999876 5556679999999999887665542          678899


Q ss_pred             EEEEccCCCeeeecccC
Q psy10867        325 GAFLGLLPPAIHDYDFT  341 (343)
Q Consensus       325 ~~~~sp~~~~l~~~~~~  341 (343)
                      +++|+|++++|++++..
T Consensus       311 ~l~~s~dg~~l~sgs~D  327 (340)
T 4aow_A          311 SLAWSADGQTLFAGYTD  327 (340)
T ss_dssp             EEEECTTSSEEEEEETT
T ss_pred             EEEECCCCCEEEEEeCC
Confidence            99999999999998754

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=100.00  E-value=4.1e-44  Score=299.74  Aligned_cols=293  Identities=13%  Similarity=0.088  Sum_probs=240.7

Q ss_pred             EEecCCceEEEEEecCCCCcceEEEEeCCc-eEEEEEcCCCeEEEEeCCCcccceecc--cCCcceEEEEECC-CCCEEE
Q psy10867         19 VWEPKGGTLLMSYKGASVLSPHSMCLLGND-YVLGVEKGKPMIQAWPVNSQEKAQLRL--ICPGRISSMQASP-DAAYIA   94 (343)
Q Consensus        19 iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~i~iw~~~~~~~~~~~~--~~~~~v~~~~~s~-~~~~l~   94 (343)
                      +|++...+....+.+|.. .|.+++|+|++ .++++++.||.|++||+.+++....+.  +|...|.+++|+| ++++|+
T Consensus        57 ~~~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~  135 (383)
T 3ei3_B           57 IRSLKSYKLHRTASPFDR-RVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLF  135 (383)
T ss_dssp             HHHHTTCEEEEEECCCSS-CEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEE
T ss_pred             cccccccceEEeccCCCC-CEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEE
Confidence            455667788889999999 99999999998 889998888999999999887765554  6999999999999 677887


Q ss_pred             E-ecCCeEEEEEccCCceEEEecc---cCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccc
Q psy10867         95 V-SIETKLHMWQISSGRLLATASS---HYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVT  170 (343)
Q Consensus        95 ~-~~d~~i~v~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  170 (343)
                      + +.|+.|++||+.+ ..+..+..   |...|.+++|+|++++|++++.|+.|++||++..                   
T Consensus       136 s~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~-------------------  195 (383)
T 3ei3_B          136 VSSIRGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDGH-------------------  195 (383)
T ss_dssp             EEETTTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETTSC-------------------
T ss_pred             EEeCCCEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECCCC-------------------
Confidence            6 6899999999986 45555544   4478999999999999999999999999999542                   


Q ss_pred             cccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCC----CceEEEeecCCcEEEEEEcC-CCCEEEEEc
Q psy10867        171 GLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCT----GEDLLSLILDTRLTCVAFDG-TEDNIYMGT  245 (343)
Q Consensus       171 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~----~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~  245 (343)
                          .+..+..|...|.+++|+|+++ .++++++.|+.|++||+++    ++.+..+.+...+.+++|+| ++++|++++
T Consensus       196 ----~~~~~~~h~~~v~~~~~~~~~~-~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~  270 (383)
T 3ei3_B          196 ----EIFKEKLHKAKVTHAEFNPRCD-WLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTD  270 (383)
T ss_dssp             ----EEEEEECSSSCEEEEEECSSCT-TEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEE
T ss_pred             ----EEEEeccCCCcEEEEEECCCCC-CEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEc
Confidence                5666778999999999999983 2899999999999999998    66777778899999999999 999999999


Q ss_pred             CCCcEEEEEeecccccccccccCC------CCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc-
Q psy10867        246 SEGVIKSFCLRQVPRTRDHHIQDS------TSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-  318 (343)
Q Consensus       246 ~d~~i~i~d~~~~~~~~~~~~~~~------~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-  318 (343)
                      .|+.|++||+++............      ..+...-.....+..++|+|++++  +++.|+.|++||+.+++.+..+. 
T Consensus       271 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~  348 (383)
T 3ei3_B          271 QRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRD  348 (383)
T ss_dssp             SSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECB
T ss_pred             CCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecC
Confidence            999999999988665433221100      000000111244556778888877  88899999999999999999887 


Q ss_pred             --cCCceEEEEEccCCCeeeecc
Q psy10867        319 --HKGPVLGAFLGLLPPAIHDYD  339 (343)
Q Consensus       319 --~~~~v~~~~~sp~~~~l~~~~  339 (343)
                        +.+.+..++|+|++++|++++
T Consensus       349 ~~~~~~~~~~~~s~~g~~l~s~s  371 (383)
T 3ei3_B          349 PNAAGIISLNKFSPTGDVLASGM  371 (383)
T ss_dssp             TTBCSCCCEEEECTTSSEEEEEE
T ss_pred             CCCCceEEEEEEecCccEEEEec
Confidence              456778889999999999885

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=100.00  E-value=4.2e-43  Score=292.00  Aligned_cols=289  Identities=14%  Similarity=0.151  Sum_probs=251.6

Q ss_pred             eEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-ecCCeEEEE
Q psy10867         26 TLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SIETKLHMW  104 (343)
Q Consensus        26 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~  104 (343)
                      .....+.+|.. .|++++|+|++.++++++.||.|++||+.+++.+..+..|...|.+++|+|++++|++ +.|+.|++|
T Consensus        23 ~~~~~l~~h~~-~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw  101 (369)
T 3zwl_B           23 MKAIKLTGHER-PLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLW  101 (369)
T ss_dssp             EEEEEEECCSS-CEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEE
T ss_pred             cccEEEEEeec-eEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEE
Confidence            34566899999 9999999999999999998899999999999988888899999999999999999987 689999999


Q ss_pred             EccCCceEEEecccCCCeEEEEEecCCCEEEEecCC-----CeEEEeecCccceeeeeecCCCCCCCCccccccceeeee
Q psy10867        105 QISSGRLLATASSHYQPITIVKWSADSNFIVTGGED-----GTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVK  179 (343)
Q Consensus       105 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (343)
                      |+.+++.+..+. +...+.+++|+|+++++++++.+     |.|++||+........+..           ........+
T Consensus       102 d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~-----------~~~~~~~~~  169 (369)
T 3zwl_B          102 DVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTK-----------VSEEPIHKI  169 (369)
T ss_dssp             ETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEE-----------ECSSCSEEE
T ss_pred             ECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecc-----------cccceeeec
Confidence            999999988887 88899999999999999999998     9999999987644332210           011234445


Q ss_pred             ccccc--ceEEEEeecCCCceEEEEeeCCCeEEEEecCC-CceEEEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEe
Q psy10867        180 SQHSL--PVTHVTLSKLGAKSRVASVSHDRTCKIFDLCT-GEDLLSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCL  255 (343)
Q Consensus       180 ~~~~~--~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~-~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~  255 (343)
                      ..|..  .+.+++|+|++  .++++++.||.|++||+++ ++.+..+. +...+.+++|+|++++|++++.|+.|++||+
T Consensus       170 ~~~~~~~~~~~~~~~~~~--~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~  247 (369)
T 3zwl_B          170 ITHEGLDAATVAGWSTKG--KYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDV  247 (369)
T ss_dssp             ECCTTCCCEEEEEECGGG--CEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred             cCCcCccceeEEEEcCCC--CEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEEC
Confidence            56666  99999999998  7999999999999999998 67777766 7888999999999999999999999999999


Q ss_pred             ecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCC--------------cEEEEecccceeeeecc-cC
Q psy10867        256 RQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADE--------------TLKIWHTISRQCLRTIQ-HK  320 (343)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg--------------~i~iwd~~~~~~~~~~~-~~  320 (343)
                      +......           .+. +...+..++|+|+++++++++.++              .+++||+.+++.+..+. |.
T Consensus       248 ~~~~~~~-----------~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~  315 (369)
T 3zwl_B          248 STLQVLK-----------KYE-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHF  315 (369)
T ss_dssp             TTCCEEE-----------EEE-CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCS
T ss_pred             CCCceee-----------eec-CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheeccc
Confidence            8754432           232 678899999999999999999988              89999999999999998 99


Q ss_pred             CceEEEEEccCCCeeeecccC
Q psy10867        321 GPVLGAFLGLLPPAIHDYDFT  341 (343)
Q Consensus       321 ~~v~~~~~sp~~~~l~~~~~~  341 (343)
                      ..|++++|+|++++|++++..
T Consensus       316 ~~v~~~~~s~~~~~l~s~~~d  336 (369)
T 3zwl_B          316 GPLNTVAISPQGTSYASGGED  336 (369)
T ss_dssp             SCEEEEEECTTSSEEEEEETT
T ss_pred             CcEEEEEECCCCCEEEEEcCC
Confidence            999999999999999998754

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.5e-43  Score=294.68  Aligned_cols=279  Identities=17%  Similarity=0.215  Sum_probs=243.4

Q ss_pred             ccceEEEecCC--------CCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceec
Q psy10867          3 LLNEVAFSYDG--------SGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLR   74 (343)
Q Consensus         3 ~v~~~~~s~~~--------dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~   74 (343)
                      +|+++.|++++        ||.|++||+.+++.+..+.+|.. .|.+++|+|++.++++++.||.|++||+.+++.+..+
T Consensus        34 ~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~-~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~  112 (369)
T 3zwl_B           34 PLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTG-TIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATW  112 (369)
T ss_dssp             CEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSS-CEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEE
T ss_pred             eEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCC-cEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEe
Confidence            45555555554        89999999999999999999999 9999999999999999998899999999999887766


Q ss_pred             ccCCcceEEEEECCCCCEEEE-ecC-----CeEEEEEccCCc-----------eEEEecccCC--CeEEEEEecCCCEEE
Q psy10867         75 LICPGRISSMQASPDAAYIAV-SIE-----TKLHMWQISSGR-----------LLATASSHYQ--PITIVKWSADSNFIV  135 (343)
Q Consensus        75 ~~~~~~v~~~~~s~~~~~l~~-~~d-----~~i~v~~~~~~~-----------~~~~~~~~~~--~v~~~~~~~~~~~l~  135 (343)
                      . +...|.+++|+|+++++++ +.+     +.|++||+..+.           ....+..|.+  .+.+++|+|++++|+
T Consensus       113 ~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  191 (369)
T 3zwl_B          113 K-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYII  191 (369)
T ss_dssp             E-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEE
T ss_pred             e-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEE
Confidence            5 8889999999999999997 456     899999998663           3344455665  899999999999999


Q ss_pred             EecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecC
Q psy10867        136 TGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLC  215 (343)
Q Consensus       136 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~  215 (343)
                      +++.||.|++||+++..                     +....+..|...|.+++|+|++  .+|++++.|+.|++||++
T Consensus       192 ~~~~dg~i~i~d~~~~~---------------------~~~~~~~~~~~~v~~~~~~~~~--~~l~~~~~d~~i~v~d~~  248 (369)
T 3zwl_B          192 AGHKDGKISKYDVSNNY---------------------EYVDSIDLHEKSISDMQFSPDL--TYFITSSRDTNSFLVDVS  248 (369)
T ss_dssp             EEETTSEEEEEETTTTT---------------------EEEEEEECCSSCEEEEEECTTS--SEEEEEETTSEEEEEETT
T ss_pred             EEcCCCEEEEEECCCCc---------------------EeEEEEecCCCceeEEEECCCC--CEEEEecCCceEEEEECC
Confidence            99999999999998731                     2555667799999999999998  899999999999999999


Q ss_pred             CCceEEEeecCCcEEEEEEcCCCCEEEEEcCCC--------------cEEEEEeecccccccccccCCCCCCccccccCc
Q psy10867        216 TGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEG--------------VIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQ  281 (343)
Q Consensus       216 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~--------------~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (343)
                      +++.+..+.+...+..++|+|+++++++++.++              .+++||+.....           +..+.+|...
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~-----------~~~~~~~~~~  317 (369)
T 3zwl_B          249 TLQVLKKYETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEE-----------IGRVQGHFGP  317 (369)
T ss_dssp             TCCEEEEEECSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCE-----------EEEEECCSSC
T ss_pred             CCceeeeecCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcc-----------hhheecccCc
Confidence            999999999999999999999999999999888              788998876443           4567789999


Q ss_pred             EEEEEEccCCCEEEEEeCCCcEEEEecccceeeeec
Q psy10867        282 VTSLSCSITGITLLSSSADETLKIWHTISRQCLRTI  317 (343)
Q Consensus       282 v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~  317 (343)
                      |++++|+|++++|++++.||.|++|+++++.....+
T Consensus       318 v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~  353 (369)
T 3zwl_B          318 LNTVAISPQGTSYASGGEDGFIRLHHFEKSYFDFKY  353 (369)
T ss_dssp             EEEEEECTTSSEEEEEETTSEEEEEEECHHHHTCCC
T ss_pred             EEEEEECCCCCEEEEEcCCCeEEEEECccccchhHH
Confidence            999999999999999999999999999887655444

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=100.00  E-value=1.9e-43  Score=336.31  Aligned_cols=336  Identities=12%  Similarity=0.135  Sum_probs=275.4

Q ss_pred             ccceEEEecCC--------CCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceec
Q psy10867          3 LLNEVAFSYDG--------SGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLR   74 (343)
Q Consensus         3 ~v~~~~~s~~~--------dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~   74 (343)
                      .|.++.|++++        ||.|++||+.+++.+..+.+|.. .|.+++|+|++.++++++.|+.|++||+.+++.+..+
T Consensus       617 ~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~-~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~  695 (1249)
T 3sfz_A          617 AVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHED-EVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTY  695 (1249)
T ss_dssp             CEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSS-CEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred             cEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCC-CEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEE
Confidence            45566666554        89999999999999999999999 9999999999999999999999999999999998888


Q ss_pred             ccCCcceEEEEECCC--CCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCcc
Q psy10867         75 LICPGRISSMQASPD--AAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRL  151 (343)
Q Consensus        75 ~~~~~~v~~~~~s~~--~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~  151 (343)
                      ..|...|.+++|+|+  +.++++ +.|+.|++||+.+++.+..+.+|.+.|.+++|+|+++++++++.||.|++||+.++
T Consensus       696 ~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~  775 (1249)
T 3sfz_A          696 DEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSA  775 (1249)
T ss_dssp             ECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGT
T ss_pred             cCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCC
Confidence            899999999999994  456776 68999999999999999999999999999999999999999999999999999988


Q ss_pred             ceeeeeecCCCCCC--------------------CCc-------------cccccceeeeecccccceEEEEeecCCCce
Q psy10867        152 ICKQTVAFGIPGSS--------------------GKG-------------VTGLTEPLHVKSQHSLPVTHVTLSKLGAKS  198 (343)
Q Consensus       152 ~~~~~~~~~~~~~~--------------------~~~-------------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~  198 (343)
                      .....+........                    +..             ............+|...|.+++|+|++  .
T Consensus       776 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~--~  853 (1249)
T 3sfz_A          776 NERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYD--H  853 (1249)
T ss_dssp             EEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSST--T
T ss_pred             cccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCC--C
Confidence            76655542211000                    000             000111122233788999999999999  8


Q ss_pred             EEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccc-----------
Q psy10867        199 RVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHI-----------  266 (343)
Q Consensus       199 ~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-----------  266 (343)
                      ++++++.|+.|++||+.+++.+..+. |...|.+++|+|+++++++++.|+.|++||+...........           
T Consensus       854 ~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~  933 (1249)
T 3sfz_A          854 LAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQEN  933 (1249)
T ss_dssp             EEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETT
T ss_pred             EEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCC
Confidence            99999999999999999998888776 778899999999999999999999999999875322111000           


Q ss_pred             ---------------cCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc-cCCceEEEEEcc
Q psy10867        267 ---------------QDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVLGAFLGL  330 (343)
Q Consensus       267 ---------------~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp  330 (343)
                                     ...........+...+.+++|+|+++++++|+.||.|++||+.+++.+..+. |...|++++|+|
T Consensus       934 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~ 1013 (1249)
T 3sfz_A          934 ETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTA 1013 (1249)
T ss_dssp             EEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECS
T ss_pred             CcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECC
Confidence                           0000001112235679999999999999999999999999999999988888 999999999999


Q ss_pred             CCCeeeecccC
Q psy10867        331 LPPAIHDYDFT  341 (343)
Q Consensus       331 ~~~~l~~~~~~  341 (343)
                      ++++|++++..
T Consensus      1014 dg~~l~s~~~d 1024 (1249)
T 3sfz_A         1014 DGKTLISSSED 1024 (1249)
T ss_dssp             SSSCEEEECSS
T ss_pred             CCCEEEEEcCC
Confidence            99999998753

>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*

Probab=100.00  E-value=3.4e-43  Score=301.53  Aligned_cols=289  Identities=16%  Similarity=0.253  Sum_probs=249.4

Q ss_pred             eEEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEE
Q psy10867          6 EVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQ   85 (343)
Q Consensus         6 ~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~   85 (343)
                      ..+++++.||.|++||+.+++.+..+.+|.. .|.+++|+|++ ++++++.||+|++||+.+++.+..+.+|...|.+++
T Consensus       133 ~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~-~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~  210 (464)
T 3v7d_B          133 NYVITGADDKMIRVYDSINKKFLLQLSGHDG-GVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLD  210 (464)
T ss_dssp             TEEEEEETTSCEEEEETTTTEEEEEECCCSS-CEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEE
T ss_pred             CEEEEEcCCCcEEEEECCCCcEEEEEeCCCc-CEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEE
Confidence            4677888899999999999999999999999 99999999998 666777779999999999998888889999999999


Q ss_pred             EC--CCCCEEEE-ecCCeEEEEEccCCc-----------------------eEEEecccCCCeEEEEEecCCCEEEEecC
Q psy10867         86 AS--PDAAYIAV-SIETKLHMWQISSGR-----------------------LLATASSHYQPITIVKWSADSNFIVTGGE  139 (343)
Q Consensus        86 ~s--~~~~~l~~-~~d~~i~v~~~~~~~-----------------------~~~~~~~~~~~v~~~~~~~~~~~l~s~~~  139 (343)
                      |+  +++.++++ +.|+.|++||+.++.                       .+..+.+|...+.++  +++++++++++.
T Consensus       211 ~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~  288 (464)
T 3v7d_B          211 IVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSY  288 (464)
T ss_dssp             EEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEET
T ss_pred             EecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeC
Confidence            98  57777776 689999999998765                       255677888888877  578899999999


Q ss_pred             CCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCce
Q psy10867        140 DGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGED  219 (343)
Q Consensus       140 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~  219 (343)
                      ||.|++||+++++                      .+..+.+|...|.+++|+|++  .++++++.|+.|++||+++++.
T Consensus       289 d~~i~vwd~~~~~----------------------~~~~~~~~~~~v~~~~~~~~~--~~l~sg~~dg~i~vwd~~~~~~  344 (464)
T 3v7d_B          289 DNTLIVWDVAQMK----------------------CLYILSGHTDRIYSTIYDHER--KRCISASMDTTIRIWDLENGEL  344 (464)
T ss_dssp             TSCEEEEETTTTE----------------------EEEEECCCSSCEEEEEEETTT--TEEEEEETTSCEEEEETTTTEE
T ss_pred             CCeEEEEECCCCc----------------------EEEEecCCCCCEEEEEEcCCC--CEEEEEeCCCcEEEEECCCCcE
Confidence            9999999998864                      455667899999999999998  7999999999999999999999


Q ss_pred             EEEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEe
Q psy10867        220 LLSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSS  298 (343)
Q Consensus       220 ~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~  298 (343)
                      +..+. |...+.+++|+  +++|++++.||.|++||+.+.....            ...|...+..++|+|++++|++++
T Consensus       345 ~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~------------~~~~~~~~~~~~~~~~~~~l~~~~  410 (464)
T 3v7d_B          345 MYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKF------------SYHHTNLSAITTFYVSDNILVSGS  410 (464)
T ss_dssp             EEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEE------------EEECTTCCCEEEEEECSSEEEEEE
T ss_pred             EEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceee------------eecCCCCccEEEEEeCCCEEEEec
Confidence            98887 78889999998  5899999999999999998754321            113566778889999999999998


Q ss_pred             CCCcEEEEecccceeeeec-c-cCCceEEEEEccCCCeeeecc
Q psy10867        299 ADETLKIWHTISRQCLRTI-Q-HKGPVLGAFLGLLPPAIHDYD  339 (343)
Q Consensus       299 ~dg~i~iwd~~~~~~~~~~-~-~~~~v~~~~~sp~~~~l~~~~  339 (343)
                       ||.|++||+.+++.+..+ . +...|.+++|+  ++.+++++
T Consensus       411 -dg~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~--~~~l~~~~  450 (464)
T 3v7d_B          411 -ENQFNIYNLRSGKLVHANILKDADQIWSVNFK--GKTLVAAV  450 (464)
T ss_dssp             -TTEEEEEETTTCCEEESCTTTTCSEEEEEEEE--TTEEEEEE
T ss_pred             -CCeEEEEECCCCcEEehhhccCCCcEEEEEec--CCEEEEEE
Confidence             899999999999999863 3 88999999997  45555543

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=100.00  E-value=2.6e-43  Score=284.22  Aligned_cols=254  Identities=13%  Similarity=0.152  Sum_probs=210.8

Q ss_pred             EEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCc--ccceecccCCcceEEEEECCC--CCEEEE-ecCCeEEE
Q psy10867         29 MSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQ--EKAQLRLICPGRISSMQASPD--AAYIAV-SIETKLHM  103 (343)
Q Consensus        29 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~--~~~~~~~~~~~~v~~~~~s~~--~~~l~~-~~d~~i~v  103 (343)
                      ..+.+|.. .|.+++|+|+|+++++++.|++|+||++.+.  +.+..+.+|.++|.+++|+|+  +++|++ +.|++|++
T Consensus         3 ~~~~~h~~-~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~i   81 (297)
T 2pm7_B            3 VIANAHNE-MIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMI   81 (297)
T ss_dssp             EECCSCSS-CEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEE
T ss_pred             eeccCCcC-ceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEE
Confidence            45778998 9999999999999999999999999999753  556778899999999999864  788887 68999999


Q ss_pred             EEccCCc--eEEEecccCCCeEEEEEecC--CCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeee
Q psy10867        104 WQISSGR--LLATASSHYQPITIVKWSAD--SNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVK  179 (343)
Q Consensus       104 ~~~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (343)
                      ||+++++  .+..+.+|...|.+++|+|+  +.+|++++.|+.|++||++.....                    ....+
T Consensus        82 Wd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~--------------------~~~~~  141 (297)
T 2pm7_B           82 WKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTT--------------------SPIII  141 (297)
T ss_dssp             EEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCB--------------------CCEEE
T ss_pred             EEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCce--------------------eeeee
Confidence            9998874  55677889999999999997  889999999999999999864211                    12455


Q ss_pred             cccccceEEEEeecCCC-----------ceEEEEeeCCCeEEEEecCCCc----eEEEee-cCCcEEEEEEcCCC---CE
Q psy10867        180 SQHSLPVTHVTLSKLGA-----------KSRVASVSHDRTCKIFDLCTGE----DLLSLI-LDTRLTCVAFDGTE---DN  240 (343)
Q Consensus       180 ~~~~~~v~~~~~~~~~~-----------~~~l~~~~~d~~i~~wd~~~~~----~~~~~~-~~~~i~~~~~~~~~---~~  240 (343)
                      .+|...|.+++|+|++.           +.+|++++.|++|++||+++++    ....+. |...|.+++|+|++   ++
T Consensus       142 ~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~  221 (297)
T 2pm7_B          142 DAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSY  221 (297)
T ss_dssp             ECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEE
T ss_pred             ecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceE
Confidence            68999999999999731           1689999999999999998876    344454 77889999999985   89


Q ss_pred             EEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecc
Q psy10867        241 IYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTI  309 (343)
Q Consensus       241 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~  309 (343)
                      |++++.|+.|++||++.........      ......|...|.+++|+|++++||+++.|+.|++|+..
T Consensus       222 las~s~D~~v~iWd~~~~~~~~~~~------~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~  284 (297)
T 2pm7_B          222 MASVSQDRTCIIWTQDNEQGPWKKT------LLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN  284 (297)
T ss_dssp             EEEEETTSCEEEEEESSTTSCCEEE------ESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred             EEEEECCCcEEEEEeCCCCCcccee------eeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEEC
Confidence            9999999999999997643211100      11124678899999999999999999999999999976

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=100.00  E-value=3e-43  Score=315.82  Aligned_cols=283  Identities=15%  Similarity=0.152  Sum_probs=238.1

Q ss_pred             eEEEEEecCCCCcceEEEEeCCc-eEEEEEcCCCeEEEEeCCCcc-----cceecccCCcceEEEEECCCCCEEEE-ecC
Q psy10867         26 TLLMSYKGASVLSPHSMCLLGND-YVLGVEKGKPMIQAWPVNSQE-----KAQLRLICPGRISSMQASPDAAYIAV-SIE   98 (343)
Q Consensus        26 ~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~i~iw~~~~~~-----~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d   98 (343)
                      +....+++|.+ .|++++|+|++ .++++++.|++|++|++.+..     ....+.+|...|.+++|+|++++|++ +.|
T Consensus       373 ~~~~~l~~H~~-~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~D  451 (694)
T 3dm0_A          373 VLKGTMRAHTD-MVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWD  451 (694)
T ss_dssp             EEEEEEECCSS-CEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred             chhhhcccCCc-eeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCC
Confidence            34557899999 99999999864 788899888999999987643     23456789999999999999999997 679


Q ss_pred             CeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeee
Q psy10867         99 TKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHV  178 (343)
Q Consensus        99 ~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (343)
                      +.|++||+.+++.+..+.+|...|.+++|+|++++|++++.|+.|++||+.......                   ....
T Consensus       452 g~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~-------------------~~~~  512 (694)
T 3dm0_A          452 GELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYT-------------------ISEG  512 (694)
T ss_dssp             SEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEE-------------------ECSS
T ss_pred             CcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCccee-------------------eccC
Confidence            999999999999999999999999999999999999999999999999986542211                   1112


Q ss_pred             ecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeec
Q psy10867        179 KSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQ  257 (343)
Q Consensus       179 ~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~  257 (343)
                      ..+|...|.+++|+|++....+++++.|+.|++||+++++....+. |...|.+++|+|++++|++|+.||.|++||+++
T Consensus       513 ~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~  592 (694)
T 3dm0_A          513 GEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAE  592 (694)
T ss_dssp             TTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTT
T ss_pred             CCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCC
Confidence            2468899999999998744689999999999999999999888776 788899999999999999999999999999987


Q ss_pred             ccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc-cC----------------
Q psy10867        258 VPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-HK----------------  320 (343)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~----------------  320 (343)
                      .....           .+. +...|.+++|+|++.+|++++ ++.|++||+++++.+..+. +.                
T Consensus       593 ~~~~~-----------~~~-~~~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  659 (694)
T 3dm0_A          593 GKKLY-----------SLE-ANSVIHALCFSPNRYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATK  659 (694)
T ss_dssp             TEEEE-----------CCB-CSSCEEEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEECCCCC---------------
T ss_pred             CceEE-----------Eec-CCCcEEEEEEcCCCcEEEEEc-CCCEEEEECCCCCChhhhccccccccccccccccccCC
Confidence            65432           222 346799999999998887766 5569999999998887664 11                


Q ss_pred             ---CceEEEEEccCCCeeeecccC
Q psy10867        321 ---GPVLGAFLGLLPPAIHDYDFT  341 (343)
Q Consensus       321 ---~~v~~~~~sp~~~~l~~~~~~  341 (343)
                         ..+++++|+|+|++|++++..
T Consensus       660 ~~~~~~~~l~~spdg~~l~sgs~D  683 (694)
T 3dm0_A          660 RKVIYCTSLNWSADGSTLFSGYTD  683 (694)
T ss_dssp             -CCCCEEEEEECTTSSEEEEEETT
T ss_pred             ceeEEeeeEEEcCCCCEEEEEcCC
Confidence               137899999999999998753

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=100.00  E-value=2.7e-43  Score=293.64  Aligned_cols=303  Identities=15%  Similarity=0.117  Sum_probs=238.0

Q ss_pred             ccceEEEecCC--------CCeEEEEecCCce--EEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccce
Q psy10867          3 LLNEVAFSYDG--------SGAISVWEPKGGT--LLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQ   72 (343)
Q Consensus         3 ~v~~~~~s~~~--------dg~i~iwd~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~   72 (343)
                      +|.++.|++++        ||.|++||+.+++  .+..+.+|.. .|.+++|+|++.++++++.|+.|++||+.+++...
T Consensus        10 ~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~   88 (372)
T 1k8k_C           10 PISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNG-QVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKP   88 (372)
T ss_dssp             CCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSS-CEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEE
T ss_pred             CeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCC-cccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeee
Confidence            45556555554        8999999999887  8899999999 99999999999999999988999999998876443


Q ss_pred             --ecccCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCCce----EEEecccCCCeEEEEEecCCCEEEEecCCCeEEE
Q psy10867         73 --LRLICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGRL----LATASSHYQPITIVKWSADSNFIVTGGEDGTICV  145 (343)
Q Consensus        73 --~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~i  145 (343)
                        ....|...|.+++|+|++++|++ +.|+.|++||+..+..    ......|...|.+++|+|++++|++++.||.|++
T Consensus        89 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~  168 (372)
T 1k8k_C           89 TLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRI  168 (372)
T ss_dssp             EEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred             eEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEE
Confidence              33578899999999999999987 6789999999998863    3334678999999999999999999999999999


Q ss_pred             eecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-
Q psy10867        146 WQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-  224 (343)
Q Consensus       146 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-  224 (343)
                      ||++.........    ...........+.+..+..|...|.+++|+|++  .+|++++.|+.|++||+++++.+..+. 
T Consensus       169 ~d~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~~~d~~i~i~d~~~~~~~~~~~~  242 (372)
T 1k8k_C          169 FSAYIKEVEERPA----PTPWGSKMPFGELMFESSSSCGWVHGVCFSANG--SRVAWVSHDSTVCLADADKKMAVATLAS  242 (372)
T ss_dssp             EECCCTTTSCCCC----CBTTBSCCCTTCEEEECCCCSSCEEEEEECSSS--SEEEEEETTTEEEEEEGGGTTEEEEEEC
T ss_pred             EEccccccccccc----ccccccccchhhheEecCCCCCeEEEEEECCCC--CEEEEEeCCCEEEEEECCCCceeEEEcc
Confidence            9986432111000    000000011234666777899999999999998  799999999999999999999988887 


Q ss_pred             cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeec--cc--cccccc-------------------ccCCCCC------Ccc
Q psy10867        225 LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQ--VP--RTRDHH-------------------IQDSTSN------PDF  275 (343)
Q Consensus       225 ~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~--~~--~~~~~~-------------------~~~~~~~------~~~  275 (343)
                      +..++.+++|+|++++++++ .|+.|++|++..  ..  ......                   ...+...      ..+
T Consensus       243 ~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  321 (372)
T 1k8k_C          243 ETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGL  321 (372)
T ss_dssp             SSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCC
T ss_pred             CCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCccccccc
Confidence            56689999999999988888 899999999987  21  000000                   0001111      223


Q ss_pred             -ccccCcEEEEEEc-cCC---CEEEEEeCCCcEEEEeccccee
Q psy10867        276 -IGHEKQVTSLSCS-ITG---ITLLSSSADETLKIWHTISRQC  313 (343)
Q Consensus       276 -~~~~~~v~~~~~s-~~~---~~l~s~~~dg~i~iwd~~~~~~  313 (343)
                       .+|...|++++|+ ++|   ++|++++.||.|++||+.+++.
T Consensus       322 ~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~~~~  364 (372)
T 1k8k_C          322 DSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLES  364 (372)
T ss_dssp             SSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHHHH
T ss_pred             cccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecChhH
Confidence             4899999999966 666   9999999999999999987654

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=100.00  E-value=1.1e-42  Score=286.29  Aligned_cols=278  Identities=19%  Similarity=0.223  Sum_probs=231.7

Q ss_pred             EEEecCCCCeEEEEecCCc-----eEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcce
Q psy10867          7 VAFSYDGSGAISVWEPKGG-----TLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRI   81 (343)
Q Consensus         7 ~~~s~~~dg~i~iwd~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v   81 (343)
                      +++|++.||+|+|||+.++     .+...+++|.. .|.+++|+|++.++++++.|+.|++|+............+...+
T Consensus        53 ~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~-~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~  131 (340)
T 4aow_A           53 MILSASRDKTIIMWKLTRDETNYGIPQRALRGHSH-FVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDV  131 (340)
T ss_dssp             EEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSS-CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCE
T ss_pred             EEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCC-CEEEEEECCCCCEEEEEcccccceEEeecccceeeeecCCCCce
Confidence            4555555899999998753     46778999999 99999999999999999999999999999988887777888899


Q ss_pred             EEEEECCCCCEEEE-ecCCeEEEEEccCCce-EEEecccCCCeEEEEEecCC--CEEEEecCCCeEEEeecCccceeeee
Q psy10867         82 SSMQASPDAAYIAV-SIETKLHMWQISSGRL-LATASSHYQPITIVKWSADS--NFIVTGGEDGTICVWQLSRLICKQTV  157 (343)
Q Consensus        82 ~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~-~~~~~~~~~~v~~~~~~~~~--~~l~s~~~dg~i~iwd~~~~~~~~~~  157 (343)
                      ..+.+++++.+|++ +.|+.+++||+..... .....+|...+..++|++++  .++++++.|+.|++||+++..     
T Consensus       132 ~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~-----  206 (340)
T 4aow_A          132 LSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCK-----  206 (340)
T ss_dssp             EEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTE-----
T ss_pred             eEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCc-----
Confidence            99999999998887 6899999999876644 34456899999999998854  578899999999999999864     


Q ss_pred             ecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCCcEEEEEEcCC
Q psy10867        158 AFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGT  237 (343)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~  237 (343)
                                       ....+.+|...|++++|+|++  .+|++++.|+.|++||+++.+.+..+.+...+.+++|+|+
T Consensus       207 -----------------~~~~~~~h~~~v~~~~~s~~~--~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~  267 (340)
T 4aow_A          207 -----------------LKTNHIGHTGYLNTVTVSPDG--SLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPN  267 (340)
T ss_dssp             -----------------EEEEECCCSSCEEEEEECTTS--SEEEEEETTCEEEEEETTTTEEEEEEECSSCEEEEEECSS
T ss_pred             -----------------eeeEecCCCCcEEEEEECCCC--CEEEEEeCCCeEEEEEeccCceeeeecCCceEEeeecCCC
Confidence                             455567899999999999999  8999999999999999999999999999999999999998


Q ss_pred             CCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccce
Q psy10867        238 EDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQ  312 (343)
Q Consensus       238 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~  312 (343)
                      +.++ +++.|+.|++||++.........  .........+|...|++++|+|++++|++|+.||.|++||+++|+
T Consensus       268 ~~~~-~~~~d~~i~iwd~~~~~~~~~~~--~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt  339 (340)
T 4aow_A          268 RYWL-CAATGPSIKIWDLEGKIIVDELK--QEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT  339 (340)
T ss_dssp             SSEE-EEEETTEEEEEETTTTEEEEEEC--CC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred             Ccee-eccCCCEEEEEECCCCeEEEecc--ccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence            7655 55579999999988654332221  112233456789999999999999999999999999999999885

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=100.00  E-value=3.1e-43  Score=291.61  Aligned_cols=283  Identities=16%  Similarity=0.179  Sum_probs=234.1

Q ss_pred             EEEEecCCCCcceEEEEeCCc-eEEEEEcC---CCeEEEEeCCCccccee-cccCCcceEEEEECCC---CCEEEE-ecC
Q psy10867         28 LMSYKGASVLSPHSMCLLGND-YVLGVEKG---KPMIQAWPVNSQEKAQL-RLICPGRISSMQASPD---AAYIAV-SIE   98 (343)
Q Consensus        28 ~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~---~~~i~iw~~~~~~~~~~-~~~~~~~v~~~~~s~~---~~~l~~-~~d   98 (343)
                      ...+++|.. .|.+++|+|++ .++++++.   |+.|++||+.+++.... ...|...|.+++|+|+   +.+|++ +.|
T Consensus        11 ~~~~~~h~~-~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d   89 (357)
T 3i2n_A           11 AHIQKGFNY-TVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFG   89 (357)
T ss_dssp             EEEEEECSS-CEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETT
T ss_pred             hhhccCCCC-ceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCC
Confidence            344577988 99999999988 67777765   79999999998876533 3378999999999998   577776 679


Q ss_pred             CeEEEEEccCCc-eEEEecccCCCeEEEEE------ecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCcccc
Q psy10867         99 TKLHMWQISSGR-LLATASSHYQPITIVKW------SADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTG  171 (343)
Q Consensus        99 ~~i~v~~~~~~~-~~~~~~~~~~~v~~~~~------~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  171 (343)
                      +.|++||+.+++ .+..+.+|...|.+++|      +|++++|++++.||.|++||+++...                  
T Consensus        90 g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~------------------  151 (357)
T 3i2n_A           90 GNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDD------------------  151 (357)
T ss_dssp             SCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSS------------------
T ss_pred             CeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCC------------------
Confidence            999999999988 88889999999999965      67899999999999999999988641                  


Q ss_pred             ccceeeeeccc----ccceEEEE----eecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCCcEEEEEEcC---CCCE
Q psy10867        172 LTEPLHVKSQH----SLPVTHVT----LSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDG---TEDN  240 (343)
Q Consensus       172 ~~~~~~~~~~~----~~~v~~~~----~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~---~~~~  240 (343)
                         +...+..|    ...+.+++    |+|++  .++++++.|+.|++||+++++......+...+.+++|+|   ++++
T Consensus       152 ---~~~~~~~~~~~~~~~v~~~~~~~~~~~~~--~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~  226 (357)
T 3i2n_A          152 ---PVANMEPVQGENKRDCWTVAFGNAYNQEE--RVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNK  226 (357)
T ss_dssp             ---CSEEECCCTTSCCCCEEEEEEECCCC-CC--CEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCE
T ss_pred             ---cceeccccCCCCCCceEEEEEEeccCCCC--CEEEEEccCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCE
Confidence               22233333    33788888    67888  899999999999999999999887777899999999999   9999


Q ss_pred             EEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCC-EEEEEeCCCcEEEEecccc--------
Q psy10867        241 IYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGI-TLLSSSADETLKIWHTISR--------  311 (343)
Q Consensus       241 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~s~~~dg~i~iwd~~~~--------  311 (343)
                      +++++.||.|++||++.........      ...+.+|...|++++|+|+++ +|++++.||.|++||+.++        
T Consensus       227 l~~~~~dg~i~i~d~~~~~~~~~~~------~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~  300 (357)
T 3i2n_A          227 LVATSLEGKFHVFDMRTQHPTKGFA------SVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDS  300 (357)
T ss_dssp             EEEEESTTEEEEEEEEEEETTTEEE------EEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCT
T ss_pred             EEEECCCCeEEEEeCcCCCccccee------eeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccC
Confidence            9999999999999999865432211      112348999999999999998 8999999999999999854        


Q ss_pred             -----------eeeeecc-cCCceEEEEEccCCCeee-eccc
Q psy10867        312 -----------QCLRTIQ-HKGPVLGAFLGLLPPAIH-DYDF  340 (343)
Q Consensus       312 -----------~~~~~~~-~~~~v~~~~~sp~~~~l~-~~~~  340 (343)
                                 +.+..+. |..+|++++|+|++++|+ +++.
T Consensus       301 ~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~  342 (357)
T 3i2n_A          301 EGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSF  342 (357)
T ss_dssp             TSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEET
T ss_pred             CCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecC
Confidence                       3555666 899999999999999998 6664

>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*

Probab=100.00  E-value=1.7e-42  Score=295.48  Aligned_cols=291  Identities=18%  Similarity=0.256  Sum_probs=251.6

Q ss_pred             eEEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEE
Q psy10867          6 EVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQ   85 (343)
Q Consensus         6 ~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~   85 (343)
                      ..+++++.||.|++||+.+++.+..+.+|.. .|.+++|+  +.++++++.||.|++||+.+++.+..+..|...|.+++
T Consensus       130 ~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~-~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~  206 (445)
T 2ovr_B          130 NRIVSGSDDNTLKVWSAVTGKCLRTLVGHTG-GVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMH  206 (445)
T ss_dssp             TEEEEEETTSCEEEEETTTCCEEEECCCCSS-CEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEE
T ss_pred             CEEEEEECCCcEEEEECCCCcEEEEEcCCCC-CEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEE
Confidence            4567888899999999999999999999999 99999998  44777777779999999999998888889999999999


Q ss_pred             ECCCCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCC
Q psy10867         86 ASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGS  164 (343)
Q Consensus        86 ~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~  164 (343)
                      |+  +..+++ +.|+.|++||+.+++.+..+.+|...|.+++|  +++++++|+.||.|++||++++.            
T Consensus       207 ~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~------------  270 (445)
T 2ovr_B          207 LH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETET------------  270 (445)
T ss_dssp             EE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTE------------
T ss_pred             ec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCc------------
Confidence            96  445554 78999999999999999999999999999999  78899999999999999998864            


Q ss_pred             CCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCCEEEE
Q psy10867        165 SGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIYM  243 (343)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~  243 (343)
                                .+..+.+|...|.+++|  ++  .++++++.|+.|++||+++++.+..+. +...+.++.++  ++++++
T Consensus       271 ----------~~~~~~~~~~~v~~~~~--~~--~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~  334 (445)
T 2ovr_B          271 ----------CLHTLQGHTNRVYSLQF--DG--IHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVS  334 (445)
T ss_dssp             ----------EEEEECCCSSCEEEEEE--CS--SEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEE--TTEEEE
T ss_pred             ----------EeEEecCCCCceEEEEE--CC--CEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEe--CCEEEE
Confidence                      45556689999999999  55  789999999999999999999988876 66778887775  679999


Q ss_pred             EcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeec------
Q psy10867        244 GTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTI------  317 (343)
Q Consensus       244 ~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~------  317 (343)
                      |+.||.|++||+++......+        .....|...|++++|+  +++|++++.||.|++||+.+++.+..+      
T Consensus       335 ~~~dg~i~vwd~~~~~~~~~~--------~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~  404 (445)
T 2ovr_B          335 GNADSTVKIWDIKTGQCLQTL--------QGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFIRNLVTLESG  404 (445)
T ss_dssp             EETTSCEEEEETTTCCEEEEE--------CSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEEECTTG
T ss_pred             EeCCCeEEEEECCCCcEEEEE--------ccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCCCceeeeeeccccC
Confidence            999999999999875443221        1112388899999995  579999999999999999999998887      


Q ss_pred             ccCCceEEEEEccCCCeeeecccC
Q psy10867        318 QHKGPVLGAFLGLLPPAIHDYDFT  341 (343)
Q Consensus       318 ~~~~~v~~~~~sp~~~~l~~~~~~  341 (343)
                      .+.+.|++++|+|++.+|++++..
T Consensus       405 ~~~~~v~~~~~s~~~~~la~~~~d  428 (445)
T 2ovr_B          405 GSGGVVWRIRASNTKLVCAVGSRN  428 (445)
T ss_dssp             GGTCEEEEEEECSSEEEEEEECSS
T ss_pred             CCCceEEEEEecCCEEEEEEcccC
Confidence            278899999999999999988753

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=100.00  E-value=9.6e-43  Score=286.31  Aligned_cols=268  Identities=13%  Similarity=0.170  Sum_probs=231.0

Q ss_pred             ccceEEEecCC-------CCeEEEEecCCceE---EEEEe--cCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcc-
Q psy10867          3 LLNEVAFSYDG-------SGAISVWEPKGGTL---LMSYK--GASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQE-   69 (343)
Q Consensus         3 ~v~~~~~s~~~-------dg~i~iwd~~~~~~---~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~-   69 (343)
                      +|.++.|++++       ||.|++||+.+++.   +..+.  .|.. .|.+++|+|++.++++++.|+.|++||+.+++ 
T Consensus        53 ~v~~~~~~~~~~~l~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~  131 (337)
T 1gxr_A           53 VVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDN-YIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTP  131 (337)
T ss_dssp             CCCEEEECSSSSEEEEECBSEEEEEETTSTTCCSCSEEEECSCTTS-BEEEEEECTTSSEEEEEESSSEEEEEECCCC--
T ss_pred             ceEEEEEecCCcEEEEcCCCeEEEEECCCCCceeeeecccccCCCC-cEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCc
Confidence            34555555544       89999999987653   33333  6777 99999999999999998888999999999877 


Q ss_pred             -cceecccCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEee
Q psy10867         70 -KAQLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQ  147 (343)
Q Consensus        70 -~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd  147 (343)
                       ....+..|...|.+++|+|++++|++ +.|+.|++||+++++.+..+..|...+.+++|+|++++|++++.||.|++||
T Consensus       132 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d  211 (337)
T 1gxr_A          132 RIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWD  211 (337)
T ss_dssp             EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred             ceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEE
Confidence             44556688899999999999998887 6789999999999999999999999999999999999999999999999999


Q ss_pred             cCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCC
Q psy10867        148 LSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDT  227 (343)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~  227 (343)
                      +++++....                       ..+...+.+++|+|++  .++++++.++.|++||+++++......+..
T Consensus       212 ~~~~~~~~~-----------------------~~~~~~v~~~~~s~~~--~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~  266 (337)
T 1gxr_A          212 LREGRQLQQ-----------------------HDFTSQIFSLGYCPTG--EWLAVGMESSNVEVLHVNKPDKYQLHLHES  266 (337)
T ss_dssp             TTTTEEEEE-----------------------EECSSCEEEEEECTTS--SEEEEEETTSCEEEEETTSSCEEEECCCSS
T ss_pred             CCCCceEee-----------------------ecCCCceEEEEECCCC--CEEEEEcCCCcEEEEECCCCCeEEEcCCcc
Confidence            998754332                       2367889999999999  899999999999999999988776666889


Q ss_pred             cEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEe
Q psy10867        228 RLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWH  307 (343)
Q Consensus       228 ~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd  307 (343)
                      .+.+++|+|++++|++++.||.|++||+......            ....|...+.+++|+|++++|++++.||.|++|+
T Consensus       267 ~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~------------~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~  334 (337)
T 1gxr_A          267 CVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASI------------FQSKESSSVLSCDISVDDKYIVTGSGDKKATVYE  334 (337)
T ss_dssp             CEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE------------EEEECSSCEEEEEECTTSCEEEEEETTSCEEEEE
T ss_pred             ceeEEEECCCCCEEEEecCCCcEEEEECCCCeEE------------EEecCCCcEEEEEECCCCCEEEEecCCCeEEEEE
Confidence            9999999999999999999999999999875432            2235788999999999999999999999999999


Q ss_pred             c
Q psy10867        308 T  308 (343)
Q Consensus       308 ~  308 (343)
                      +
T Consensus       335 ~  335 (337)
T 1gxr_A          335 V  335 (337)
T ss_dssp             E
T ss_pred             E
Confidence            7

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=100.00  E-value=4.5e-43  Score=297.29  Aligned_cols=308  Identities=14%  Similarity=0.151  Sum_probs=238.8

Q ss_pred             ecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCce-EEEEEcCCCeEEEEeC----CCcc------cceeccc--
Q psy10867         10 SYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDY-VLGVEKGKPMIQAWPV----NSQE------KAQLRLI--   76 (343)
Q Consensus        10 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~~~~i~iw~~----~~~~------~~~~~~~--   76 (343)
                      ..+....+.+|++...........|.. .|.+++|+|++. ++++++.||.|++|++    .+++      ....+..  
T Consensus        20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~   98 (425)
T 1r5m_A           20 EDDTNSIDSSDDLDGFVKILKEIVKLD-NIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPF   98 (425)
T ss_dssp             --------------CCCEECEEEEECS-CCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCC
T ss_pred             cCccccccccccchhhhhheeeeeccC-ceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccc
Confidence            333445678899877666666666777 999999999999 9999999999999999    8777      2332222  


Q ss_pred             --------CCcceEEEEECCCCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEee
Q psy10867         77 --------CPGRISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQ  147 (343)
Q Consensus        77 --------~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd  147 (343)
                              |.+.|.+++|+|++++|++ +.|+.|++|| .+++.+..+..|...|.+++|+|++++|++++.||.|++||
T Consensus        99 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd  177 (425)
T 1r5m_A           99 ALSASSGKTTNQVTCLAWSHDGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWN  177 (425)
T ss_dssp             CCC------CBCEEEEEECTTSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEE
T ss_pred             cccccccCCCCceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEE
Confidence                    6779999999999999997 6789999999 67888899999999999999999999999999999999999


Q ss_pred             cCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cC
Q psy10867        148 LSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LD  226 (343)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~  226 (343)
                      +.++.....+.........       ............+.+++|+|++   .+++++.++.|++||+++++.+..+. +.
T Consensus       178 ~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~g~i~~~d~~~~~~~~~~~~~~  247 (425)
T 1r5m_A          178 VISGTVMQHFELKETGGSS-------INAENHSGDGSLGVDVEWVDDD---KFVIPGPKGAIFVYQITEKTPTGKLIGHH  247 (425)
T ss_dssp             TTTTEEEEEECCC----------------------CCCBSCCEEEETT---EEEEECGGGCEEEEETTCSSCSEEECCCS
T ss_pred             CCCCcEEEEeeccccCccc-------eeeccccCCcceeeEEEEcCCC---EEEEEcCCCeEEEEEcCCCceeeeeccCC
Confidence            9987655443211000000       0000011122228899999986   68899999999999999998887776 77


Q ss_pred             CcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEE
Q psy10867        227 TRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIW  306 (343)
Q Consensus       227 ~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw  306 (343)
                      ..+.+++|+|++++|++++.|+.|++||++....           ...+.+|...|.+++|+|++ ++++++.|+.|++|
T Consensus       248 ~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~-----------~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~  315 (425)
T 1r5m_A          248 GPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNS-----------QNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLW  315 (425)
T ss_dssp             SCEEEEEEETTTTEEEEEETTSCEEEECSSSBSC-----------SEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEE
T ss_pred             CceEEEEECCCCCEEEEEcCCCEEEEEECCCCcc-----------ceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEE
Confidence            8899999999999999999999999999887543           44567799999999999999 99999999999999


Q ss_pred             ecccceeeeecc-cCCceEEEEEccCCCeeeecccC
Q psy10867        307 HTISRQCLRTIQ-HKGPVLGAFLGLLPPAIHDYDFT  341 (343)
Q Consensus       307 d~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~~  341 (343)
                      |+.+++.+..+. |...|.+++|+|++++|++++..
T Consensus       316 d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d  351 (425)
T 1r5m_A          316 SLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMD  351 (425)
T ss_dssp             ETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETT
T ss_pred             ECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECC
Confidence            999999999888 88999999999999999998754

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=100.00  E-value=3.6e-43  Score=315.26  Aligned_cols=278  Identities=21%  Similarity=0.237  Sum_probs=230.9

Q ss_pred             eEEEecCCCCeEEEEecCC-----ceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcc
Q psy10867          6 EVAFSYDGSGAISVWEPKG-----GTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGR   80 (343)
Q Consensus         6 ~~~~s~~~dg~i~iwd~~~-----~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~   80 (343)
                      .+++|++.||.|++||+.+     +.....+.+|.. .|.+++|+|++.++++++.|+.|++||+.+++....+.+|...
T Consensus       396 ~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~-~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~  474 (694)
T 3dm0_A          396 DIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSH-FVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKD  474 (694)
T ss_dssp             SEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSS-CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSC
T ss_pred             CEEEEEeCCCcEEEEEccCCCcccccccceecCCCC-cEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCC
Confidence            4677888899999999875     456778999999 9999999999999999999999999999999888888899999


Q ss_pred             eEEEEECCCCCEEEE-ecCCeEEEEEccCCceEEEe---cccCCCeEEEEEecCC--CEEEEecCCCeEEEeecCcccee
Q psy10867         81 ISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATA---SSHYQPITIVKWSADS--NFIVTGGEDGTICVWQLSRLICK  154 (343)
Q Consensus        81 v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~---~~~~~~v~~~~~~~~~--~~l~s~~~dg~i~iwd~~~~~~~  154 (343)
                      |.+++|+|++++|++ +.|++|++||+.........   .+|...|.+++|+|++  ..+++++.|+.|++||+++..  
T Consensus       475 v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~--  552 (694)
T 3dm0_A          475 VLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCK--  552 (694)
T ss_dssp             EEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCC--
T ss_pred             EEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCc--
Confidence            999999999998887 68999999998655433332   4688899999999986  589999999999999998763  


Q ss_pred             eeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCCcEEEEEE
Q psy10867        155 QTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAF  234 (343)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~  234 (343)
                                          ....+.+|...|.+++|+|++  .+|++++.|+.|++||+++++.+..+.....+.+++|
T Consensus       553 --------------------~~~~~~~h~~~v~~v~~spdg--~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~  610 (694)
T 3dm0_A          553 --------------------LRSTLAGHTGYVSTVAVSPDG--SLCASGGKDGVVLLWDLAEGKKLYSLEANSVIHALCF  610 (694)
T ss_dssp             --------------------EEEEECCCSSCEEEEEECTTS--SEEEEEETTSBCEEEETTTTEEEECCBCSSCEEEEEE
T ss_pred             --------------------EEEEEcCCCCCEEEEEEeCCC--CEEEEEeCCCeEEEEECCCCceEEEecCCCcEEEEEE
Confidence                                445667899999999999999  8999999999999999999999888888889999999


Q ss_pred             cCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCC--------CccccccCcEEEEEEccCCCEEEEEeCCCcEEEE
Q psy10867        235 DGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSN--------PDFIGHEKQVTSLSCSITGITLLSSSADETLKIW  306 (343)
Q Consensus       235 ~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~--------~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw  306 (343)
                      +|++.++++++ ++.|++||+++...............        .....+...+++++|+|+|++|++|+.||.|++|
T Consensus       611 sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW  689 (694)
T 3dm0_A          611 SPNRYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVW  689 (694)
T ss_dssp             CSSSSEEEEEE-TTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred             cCCCcEEEEEc-CCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEE
Confidence            99998888765 56699999987654433221110000        0011122347899999999999999999999999


Q ss_pred             ecc
Q psy10867        307 HTI  309 (343)
Q Consensus       307 d~~  309 (343)
                      ++.
T Consensus       690 ~i~  692 (694)
T 3dm0_A          690 GIG  692 (694)
T ss_dssp             EC-
T ss_pred             ecc
Confidence            985

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=100.00  E-value=2e-42  Score=306.84  Aligned_cols=322  Identities=16%  Similarity=0.201  Sum_probs=250.3

Q ss_pred             ccceEEEecCCC------------CeEEEEecCCceEEEEEecCCCCcceEEEEeCCce-EEEEEcCCCeEEEEeCCCcc
Q psy10867          3 LLNEVAFSYDGS------------GAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDY-VLGVEKGKPMIQAWPVNSQE   69 (343)
Q Consensus         3 ~v~~~~~s~~~d------------g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~~~~i~iw~~~~~~   69 (343)
                      +|.++.|++++.            +.|++||  .++.+..+.+|.. .|.+++|+|++. ++++++.|+.|++||+.+++
T Consensus       118 ~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~~-~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~  194 (615)
T 1pgu_A          118 PISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLGEVSGHSQ-RINACHLKQSRPMRSMTVGDDGSVVFYQGPPFK  194 (615)
T ss_dssp             CEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEEECCSCSS-CEEEEEECSSSSCEEEEEETTTEEEEEETTTBE
T ss_pred             cEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcceeeecCCc-cEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcc
Confidence            566777777762            6788888  6788999999999 999999999986 78888888999999999999


Q ss_pred             cceecccCCc---ceEEEEECCC-CCEEEE-ecCCeEEEEEccCCceEEEe-c---ccCCCeEEEEEecCCCEEEEecCC
Q psy10867         70 KAQLRLICPG---RISSMQASPD-AAYIAV-SIETKLHMWQISSGRLLATA-S---SHYQPITIVKWSADSNFIVTGGED  140 (343)
Q Consensus        70 ~~~~~~~~~~---~v~~~~~s~~-~~~l~~-~~d~~i~v~~~~~~~~~~~~-~---~~~~~v~~~~~~~~~~~l~s~~~d  140 (343)
                      ....+..|..   .|.+++|+|+ +++|++ +.|+.|++||+.+++.+..+ .   .|...|.+++|+ ++++|++++.|
T Consensus       195 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d  273 (615)
T 1pgu_A          195 FSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGAD  273 (615)
T ss_dssp             EEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETT
T ss_pred             eeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCC
Confidence            8888888998   9999999999 998887 67999999999999999998 6   899999999999 99999999999


Q ss_pred             CeEEEeecCccceeeeeecCCCCCC----------C---------Ccc----ccccceeeeecccccc------------
Q psy10867        141 GTICVWQLSRLICKQTVAFGIPGSS----------G---------KGV----TGLTEPLHVKSQHSLP------------  185 (343)
Q Consensus       141 g~i~iwd~~~~~~~~~~~~~~~~~~----------~---------~~~----~~~~~~~~~~~~~~~~------------  185 (343)
                      |.|++||+++++....+........          +         ...    ....+++..+.+|...            
T Consensus       274 ~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~l~~~  353 (615)
T 1pgu_A          274 ATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTVNPLISG  353 (615)
T ss_dssp             SEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEETTTTEEE
T ss_pred             CcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEecCcEEE
Confidence            9999999998776655543210000          0         000    0001222223333333            


Q ss_pred             ---------------------eEEEEeecCCC------------------------------------------------
Q psy10867        186 ---------------------VTHVTLSKLGA------------------------------------------------  196 (343)
Q Consensus       186 ---------------------v~~~~~~~~~~------------------------------------------------  196 (343)
                                           |.+++| +++.                                                
T Consensus       354 ~~dg~i~~w~~~~~~~~~~~~v~~~~~-~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~  432 (615)
T 1pgu_A          354 SYDGRIMEWSSSSMHQDHSNLIVSLDN-SKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLIL  432 (615)
T ss_dssp             ETTSCEEETTTTEEECCCCSCEEEEEC-CSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEE
T ss_pred             CCCCeEEEEEchhhcCcccCceEEEEE-CCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEE
Confidence                                 333333 1120                                                


Q ss_pred             -----------------------ceEEEEeeC-CCeEEEEecCCCceE-EEee-cCCcEEEEEEcCCCCEEEEEcCCCcE
Q psy10867        197 -----------------------KSRVASVSH-DRTCKIFDLCTGEDL-LSLI-LDTRLTCVAFDGTEDNIYMGTSEGVI  250 (343)
Q Consensus       197 -----------------------~~~l~~~~~-d~~i~~wd~~~~~~~-~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i  250 (343)
                                             +.++++++. |+.|++||+.+++.. ..+. +...+.+++|+|++++|++++.|+.|
T Consensus       433 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i  512 (615)
T 1pgu_A          433 QSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKI  512 (615)
T ss_dssp             ETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred             eccCCceeeecccCCCceEEEEcCCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCCCEEEEcCCCCeE
Confidence                                   034555555 666666666555443 2222 57789999999999999999999999


Q ss_pred             EEEEeecccccccccccCCCCCCcccc-ccCcEEEEEEcc----------CCCEEEEEeCCCcEEEEecccc-eeeeecc
Q psy10867        251 KSFCLRQVPRTRDHHIQDSTSNPDFIG-HEKQVTSLSCSI----------TGITLLSSSADETLKIWHTISR-QCLRTIQ  318 (343)
Q Consensus       251 ~i~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~----------~~~~l~s~~~dg~i~iwd~~~~-~~~~~~~  318 (343)
                      ++||+.+...           +..+.+ |...|++++|+|          ++++|++++.||.|++||+.++ +++..+.
T Consensus       513 ~iw~~~~~~~-----------~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~  581 (615)
T 1pgu_A          513 LLYDLQSREV-----------KTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALN  581 (615)
T ss_dssp             EEEETTTTEE-----------EECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETT
T ss_pred             EEeeCCCCcc-----------eeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechhhh
Confidence            9999987544           334555 899999999999          9999999999999999999998 7888888


Q ss_pred             -cCCceEEEEEccCCCeeeecccC
Q psy10867        319 -HKGPVLGAFLGLLPPAIHDYDFT  341 (343)
Q Consensus       319 -~~~~v~~~~~sp~~~~l~~~~~~  341 (343)
                       |...|++++|+|+++ |++++..
T Consensus       582 ~h~~~v~~l~~s~~~~-l~s~~~d  604 (615)
T 1pgu_A          582 AHKDGVNNLLWETPST-LVSSGAD  604 (615)
T ss_dssp             SSTTCEEEEEEEETTE-EEEEETT
T ss_pred             cCccceEEEEEcCCCC-eEEecCC
Confidence             999999999999999 8888653

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=100.00  E-value=1.1e-43  Score=295.21  Aligned_cols=296  Identities=15%  Similarity=0.175  Sum_probs=238.5

Q ss_pred             cccceEEEecC------------CCCeEEEEecCCceEEEEEec-----CCCCcceEEEEeCC----ceEEEEEcCCCeE
Q psy10867          2 SLLNEVAFSYD------------GSGAISVWEPKGGTLLMSYKG-----ASVLSPHSMCLLGN----DYVLGVEKGKPMI   60 (343)
Q Consensus         2 ~~v~~~~~s~~------------~dg~i~iwd~~~~~~~~~~~~-----~~~~~v~~~~~~~~----~~~~~~~~~~~~i   60 (343)
                      .+|.++.|+|+            +++.|++||+.+++.+..+..     |.. .|.+++|+|+    +.++++++.||.|
T Consensus        19 ~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~l~~~~~dg~i   97 (366)
T 3k26_A           19 QPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADE-NFYTCAWTYDSNTSHPLLAVAGSRGII   97 (366)
T ss_dssp             SCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTC-CEEEEEEEECTTTCCEEEEEEETTCEE
T ss_pred             CceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCC-cEEEEEeccCCCCCCCEEEEecCCCEE
Confidence            35667777763            368999999998887777664     345 7999999998    7789999888999


Q ss_pred             EEEeCCCcccceecccCCcceEEEEECC-CCCEEEE-ecCCeEEEEEccCCceEEEe---cccCCCeEEEEEecCCCEEE
Q psy10867         61 QAWPVNSQEKAQLRLICPGRISSMQASP-DAAYIAV-SIETKLHMWQISSGRLLATA---SSHYQPITIVKWSADSNFIV  135 (343)
Q Consensus        61 ~iw~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~-~~d~~i~v~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~  135 (343)
                      ++||+.+++.+..+..|...|.+++|+| ++++|++ +.|+.|++||+++++.+..+   .+|...|.+++|+|++++|+
T Consensus        98 ~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  177 (366)
T 3k26_A           98 RIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIM  177 (366)
T ss_dssp             EEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEE
T ss_pred             EEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEE
Confidence            9999999998888888999999999999 8898887 67999999999999988888   68999999999999999999


Q ss_pred             EecCCCeEEEeecCccceeeeeecCCC------CCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeE
Q psy10867        136 TGGEDGTICVWQLSRLICKQTVAFGIP------GSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTC  209 (343)
Q Consensus       136 s~~~dg~i~iwd~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i  209 (343)
                      +++.||.|++||+++......+.....      ...................|...|.+++|+  +  .++++++.|+.|
T Consensus       178 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~--~~l~~~~~d~~i  253 (366)
T 3k26_A          178 SCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--G--DLILSKSCENAI  253 (366)
T ss_dssp             EEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--T--TEEEEECSSSEE
T ss_pred             EecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--C--CEEEEEecCCEE
Confidence            999999999999998755433221000      000000011112334555699999999999  4  689999999999


Q ss_pred             EEEecCCCce--------------EEEee-cCCcEEEEEEcCC--CCEEEEEcCCCcEEEEEeecccccccccccCCCCC
Q psy10867        210 KIFDLCTGED--------------LLSLI-LDTRLTCVAFDGT--EDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSN  272 (343)
Q Consensus       210 ~~wd~~~~~~--------------~~~~~-~~~~i~~~~~~~~--~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~  272 (343)
                      ++||+++++.              +..+. +...+.+++|+|+  +++|++++.||.|++||+.........       .
T Consensus       254 ~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~-------~  326 (366)
T 3k26_A          254 VCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAK-------C  326 (366)
T ss_dssp             EEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCE-------E
T ss_pred             EEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCcccc-------c
Confidence            9999988754              44444 6778999999999  999999999999999999876533211       2


Q ss_pred             Cccccc--cCcEEEEEEccCCCEEEEEeCCCcEEEEecc
Q psy10867        273 PDFIGH--EKQVTSLSCSITGITLLSSSADETLKIWHTI  309 (343)
Q Consensus       273 ~~~~~~--~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~  309 (343)
                      ..+.+|  ...|++++|+|++++|++++.||.|++||+.
T Consensus       327 ~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~  365 (366)
T 3k26_A          327 TTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL  365 (366)
T ss_dssp             EEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred             eEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence            345566  7899999999999999999999999999985

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=100.00  E-value=2e-43  Score=297.05  Aligned_cols=281  Identities=15%  Similarity=0.172  Sum_probs=231.9

Q ss_pred             eEEEecCCCCeEEEEecCCce------EEEEEecCCCCcceEEEEeCC----c---eEEEEEcCCCeEEEEeCCCccc--
Q psy10867          6 EVAFSYDGSGAISVWEPKGGT------LLMSYKGASVLSPHSMCLLGN----D---YVLGVEKGKPMIQAWPVNSQEK--   70 (343)
Q Consensus         6 ~~~~s~~~dg~i~iwd~~~~~------~~~~~~~~~~~~v~~~~~~~~----~---~~~~~~~~~~~i~iw~~~~~~~--   70 (343)
                      .++++++.||.|++||+.+++      .+..+.+|.. .|.+++|+|+    +   .++++++.|+.|++|++.+++.  
T Consensus        27 ~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~  105 (397)
T 1sq9_A           27 SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKS-GLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETK  105 (397)
T ss_dssp             SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTT-CEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTC
T ss_pred             CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCC-cEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccc
Confidence            456677779999999999887      7889999999 9999999999    9   8999988889999999998886  


Q ss_pred             ---ceecccC-----CcceEEEEEC----CCCCE-EEE-ecCCeEEEEEccC------CceEE-----Ee-------ccc
Q psy10867         71 ---AQLRLIC-----PGRISSMQAS----PDAAY-IAV-SIETKLHMWQISS------GRLLA-----TA-------SSH  118 (343)
Q Consensus        71 ---~~~~~~~-----~~~v~~~~~s----~~~~~-l~~-~~d~~i~v~~~~~------~~~~~-----~~-------~~~  118 (343)
                         ...+..|     ...|.+++|+    |++++ |++ +.|+.|++||+.+      ++.+.     .+       ..|
T Consensus       106 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (397)
T 1sq9_A          106 KVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTP  185 (397)
T ss_dssp             CEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSS
T ss_pred             cccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCC
Confidence               6666677     5899999999    99998 876 6899999999998      65554     56       458


Q ss_pred             CCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecc---c---ccceEEEEee
Q psy10867        119 YQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQ---H---SLPVTHVTLS  192 (343)
Q Consensus       119 ~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~v~~~~~~  192 (343)
                      ...|.+++|+|++ ++++++.||.|++||+++..                      .+..+..   |   ...|.+++|+
T Consensus       186 ~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~----------------------~~~~~~~~~~h~~~~~~i~~i~~~  242 (397)
T 1sq9_A          186 SQFATSVDISERG-LIATGFNNGTVQISELSTLR----------------------PLYNFESQHSMINNSNSIRSVKFS  242 (397)
T ss_dssp             CCCCCEEEECTTS-EEEEECTTSEEEEEETTTTE----------------------EEEEEECCC---CCCCCEEEEEEC
T ss_pred             CCCceEEEECCCc-eEEEEeCCCcEEEEECCCCc----------------------eeEEEeccccccccCCccceEEEC
Confidence            8999999999999 99999999999999998864                      3444455   8   8999999999


Q ss_pred             cCCCceEEEEeeCC---CeEEEEecCCCceEEEee--------------cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEe
Q psy10867        193 KLGAKSRVASVSHD---RTCKIFDLCTGEDLLSLI--------------LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCL  255 (343)
Q Consensus       193 ~~~~~~~l~~~~~d---~~i~~wd~~~~~~~~~~~--------------~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~  255 (343)
                      |++  .+|++++.|   +.|++||+++++.+..+.              +...+.+++|+|++++|++++.||.|++||+
T Consensus       243 ~~~--~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~  320 (397)
T 1sq9_A          243 PQG--SLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDV  320 (397)
T ss_dssp             SST--TEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEET
T ss_pred             CCC--CEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEc
Confidence            998  899999999   999999999999888876              6788999999999999999999999999999


Q ss_pred             ecccccccccccC----------CCCCCccccccCcEEEEEEccCC----------CEEEEEeCCCcEEEEecccce
Q psy10867        256 RQVPRTRDHHIQD----------STSNPDFIGHEKQVTSLSCSITG----------ITLLSSSADETLKIWHTISRQ  312 (343)
Q Consensus       256 ~~~~~~~~~~~~~----------~~~~~~~~~~~~~v~~~~~s~~~----------~~l~s~~~dg~i~iwd~~~~~  312 (343)
                      +.......+....          .........|...|++++|+|++          ++|++++.||.|++||+.+|+
T Consensus       321 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g~  397 (397)
T 1sq9_A          321 KTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGGK  397 (397)
T ss_dssp             TTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred             CCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCCCC
Confidence            8765433321000          00000112238999999999998          799999999999999998764

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=100.00  E-value=1.3e-42  Score=317.72  Aligned_cols=274  Identities=15%  Similarity=0.163  Sum_probs=249.1

Q ss_pred             eEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-ecCCeEEEE
Q psy10867         26 TLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SIETKLHMW  104 (343)
Q Consensus        26 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~  104 (343)
                      +..+.+.+|.. .|.+++|+|++.+++++..+|.|++||+.+++.+..+..|..+|.+++|+|++++|++ +.|+.|++|
T Consensus         4 ~~~~~~~~h~~-~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw   82 (814)
T 3mkq_A            4 DIKKTFSNRSD-RVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVF   82 (814)
T ss_dssp             CCEEEEEEECS-CEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEE
T ss_pred             ccceeeecCCC-ceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEE
Confidence            45678899999 9999999999999999998899999999999988888899999999999999999987 678999999


Q ss_pred             EccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeeccccc
Q psy10867        105 QISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSL  184 (343)
Q Consensus       105 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (343)
                      |+.+++.+..+.+|.+.|.+++|+|++++|++++.||.|++||+.++..                     ....+.+|..
T Consensus        83 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~---------------------~~~~~~~~~~  141 (814)
T 3mkq_A           83 NYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWA---------------------LEQTFEGHEH  141 (814)
T ss_dssp             ETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSE---------------------EEEEEECCSS
T ss_pred             ECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCce---------------------EEEEEcCCCC
Confidence            9999999999999999999999999999999999999999999987521                     4556678999


Q ss_pred             ceEEEEeec-CCCceEEEEeeCCCeEEEEecCCCceEEEee--cCCcEEEEEEcC--CCCEEEEEcCCCcEEEEEeeccc
Q psy10867        185 PVTHVTLSK-LGAKSRVASVSHDRTCKIFDLCTGEDLLSLI--LDTRLTCVAFDG--TEDNIYMGTSEGVIKSFCLRQVP  259 (343)
Q Consensus       185 ~v~~~~~~~-~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~--~~~~i~~~~~~~--~~~~l~~~~~d~~i~i~d~~~~~  259 (343)
                      .|.+++|+| ++  ..+++++.||.|++||+++++....+.  +...+.+++|+|  ++.++++++.||.|++||+....
T Consensus       142 ~v~~~~~~p~~~--~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~  219 (814)
T 3mkq_A          142 FVMCVAFNPKDP--STFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKS  219 (814)
T ss_dssp             CEEEEEEETTEE--EEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTE
T ss_pred             cEEEEEEEcCCC--CEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCc
Confidence            999999999 66  799999999999999999888777766  347899999999  99999999999999999987644


Q ss_pred             ccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc-cCCceEEEEEccCCCe
Q psy10867        260 RTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVLGAFLGLLPPA  334 (343)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~  334 (343)
                      .           +..+.+|...|++++|+|++++|++++.||.|++||+.+++.+..+. +...+.+++|+|+++.
T Consensus       220 ~-----------~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~  284 (814)
T 3mkq_A          220 C-----------VATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRK  284 (814)
T ss_dssp             E-----------EEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGG
T ss_pred             E-----------EEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCc
Confidence            3           44567899999999999999999999999999999999999999988 8889999999999984

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=100.00  E-value=3.3e-43  Score=291.37  Aligned_cols=274  Identities=12%  Similarity=0.132  Sum_probs=224.4

Q ss_pred             CCeEEEEecCCceEEEEEe-cCCCCcceEEEEeCC---ceEEEEEcCCCeEEEEeCCCcc-cceecccCCcceEEEE---
Q psy10867         14 SGAISVWEPKGGTLLMSYK-GASVLSPHSMCLLGN---DYVLGVEKGKPMIQAWPVNSQE-KAQLRLICPGRISSMQ---   85 (343)
Q Consensus        14 dg~i~iwd~~~~~~~~~~~-~~~~~~v~~~~~~~~---~~~~~~~~~~~~i~iw~~~~~~-~~~~~~~~~~~v~~~~---   85 (343)
                      ||.|++||+.+++...... +|.. .|.+++|+|+   +.++++++.||.|++||+.+++ ....+..|...|.+++   
T Consensus        43 d~~v~iw~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~  121 (357)
T 3i2n_A           43 TGVIQLYEIQHGDLKLLREIEKAK-PIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIG  121 (357)
T ss_dssp             CEEEEEEEECSSSEEEEEEEEESS-CEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEES
T ss_pred             CcEEEEEeCCCCcccceeeecccC-cEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeecc
Confidence            7899999999887765533 6777 9999999998   6888888888999999999888 7777889999999995   


Q ss_pred             ---ECCCCCEEEE-ecCCeEEEEEccCCc-eEEEecccCC----CeEEEE----EecCCCEEEEecCCCeEEEeecCccc
Q psy10867         86 ---ASPDAAYIAV-SIETKLHMWQISSGR-LLATASSHYQ----PITIVK----WSADSNFIVTGGEDGTICVWQLSRLI  152 (343)
Q Consensus        86 ---~s~~~~~l~~-~~d~~i~v~~~~~~~-~~~~~~~~~~----~v~~~~----~~~~~~~l~s~~~dg~i~iwd~~~~~  152 (343)
                         |+|++++|++ +.|+.|++||+.+++ .+..+..|.+    .+.+++    |+|+++++++++.||.|++||+++..
T Consensus       122 ~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~  201 (357)
T 3i2n_A          122 GLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMA  201 (357)
T ss_dssp             GGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTE
T ss_pred             ccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCc
Confidence               5788988887 689999999999886 6777766554    799998    67899999999999999999999864


Q ss_pred             eeeeeecCCCCCCCCccccccceeeeecccccceEEEEeec---CCCceEEEEeeCCCeEEEEecCCCceEEEe------
Q psy10867        153 CKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSK---LGAKSRVASVSHDRTCKIFDLCTGEDLLSL------  223 (343)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~------  223 (343)
                      .                       .....|...|.+++|+|   ++  .++++++.||.|++||+++++....+      
T Consensus       202 ~-----------------------~~~~~~~~~v~~~~~~~~~~~~--~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~  256 (357)
T 3i2n_A          202 L-----------------------RWETNIKNGVCSLEFDRKDISM--NKLVATSLEGKFHVFDMRTQHPTKGFASVSEK  256 (357)
T ss_dssp             E-----------------------EEEEECSSCEEEEEESCSSSSC--CEEEEEESTTEEEEEEEEEEETTTEEEEEEEE
T ss_pred             e-----------------------eeecCCCCceEEEEcCCCCCCC--CEEEEECCCCeEEEEeCcCCCcccceeeeccC
Confidence            3                       23345888999999999   77  79999999999999999887654433      


Q ss_pred             ecCCcEEEEEEcCCCC-EEEEEcCCCcEEEEEeecccccccccccC--------CCCCCccccccCcEEEEEEccCCCEE
Q psy10867        224 ILDTRLTCVAFDGTED-NIYMGTSEGVIKSFCLRQVPRTRDHHIQD--------STSNPDFIGHEKQVTSLSCSITGITL  294 (343)
Q Consensus       224 ~~~~~i~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~--------~~~~~~~~~~~~~v~~~~~s~~~~~l  294 (343)
                      .+...+.+++|+|+++ ++++++.||.|++||++............        ...+..+.+|...|++++|+|++++|
T Consensus       257 ~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l  336 (357)
T 3i2n_A          257 AHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGL  336 (357)
T ss_dssp             CCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTE
T ss_pred             CCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeE
Confidence            3788899999999998 89999999999999998755432111000        02255677899999999999999999


Q ss_pred             E-EEeCCCcEEEEeccccee
Q psy10867        295 L-SSSADETLKIWHTISRQC  313 (343)
Q Consensus       295 ~-s~~~dg~i~iwd~~~~~~  313 (343)
                      + +++.||.|++||+.+.+.
T Consensus       337 ~~s~~~d~~i~iw~~~~~~~  356 (357)
T 3i2n_A          337 CVCSSFDQTVRVLIVTKLNK  356 (357)
T ss_dssp             EEEEETTSEEEEEEECC---
T ss_pred             EEEecCCCcEEEEECCCccc
Confidence            8 899999999999987654

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.4e-42  Score=281.09  Aligned_cols=269  Identities=14%  Similarity=0.161  Sum_probs=234.7

Q ss_pred             ceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-ecCCeEEE
Q psy10867         25 GTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SIETKLHM  103 (343)
Q Consensus        25 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v  103 (343)
                      .+....+.+|.. .|.+++| |++.++++++.||.|++||+.+++....+..|...|.+++|+|++++|++ +.|+.|++
T Consensus         8 ~~~~~~l~~h~~-~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~   85 (313)
T 3odt_A            8 YQLSATLKGHDQ-DVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMING   85 (313)
T ss_dssp             CEEEEEECCCSS-CEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEE
T ss_pred             HHHHHHhhCCCC-CcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEE
Confidence            477889999999 9999999 88888888888899999999998888888899999999999999999987 68999999


Q ss_pred             EEccCC---ceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeec
Q psy10867        104 WQISSG---RLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKS  180 (343)
Q Consensus       104 ~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (343)
                      |++...   +.+..+.+|...|.+++|  +++++++++.||.|++||...                        ....+.
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d~~~------------------------~~~~~~  139 (313)
T 3odt_A           86 VPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWKEGS------------------------LVYNLQ  139 (313)
T ss_dssp             EETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTE------------------------EEEEEE
T ss_pred             EEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEcCCc------------------------EEEecc
Confidence            998764   557778899999999999  578999999999999999322                        556677


Q ss_pred             ccccceEEEEeec-CCCceEEEEeeCCCeEEEEecCCCceEEEee--cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeec
Q psy10867        181 QHSLPVTHVTLSK-LGAKSRVASVSHDRTCKIFDLCTGEDLLSLI--LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQ  257 (343)
Q Consensus       181 ~~~~~v~~~~~~~-~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~  257 (343)
                      .|...+.++++.| ++  .++++++.|+.|++||.  .+....+.  +...+.+++|+|++. +++++.|+.|++||++.
T Consensus       140 ~~~~~v~~~~~~~~~~--~~l~~~~~d~~i~i~d~--~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~  214 (313)
T 3odt_A          140 AHNASVWDAKVVSFSE--NKFLTASADKTIKLWQN--DKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHT  214 (313)
T ss_dssp             CCSSCEEEEEEEETTT--TEEEEEETTSCEEEEET--TEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTT
T ss_pred             cCCCceeEEEEccCCC--CEEEEEECCCCEEEEec--CceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCc
Confidence            8999999999998 66  79999999999999994  44444444  778899999999998 99999999999999987


Q ss_pred             ccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc-cCCceEEEEEccCCCeee
Q psy10867        258 VPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVLGAFLGLLPPAIH  336 (343)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~  336 (343)
                      ...           +..+.+|...|++++|+|++ .|++++.||.|++||+.+++.+..+. |...|.+++|+|+++++ 
T Consensus       215 ~~~-----------~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-  281 (313)
T 3odt_A          215 GDV-----------LRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGDII-  281 (313)
T ss_dssp             CCE-----------EEEEECCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSCEE-
T ss_pred             hhh-----------hhhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCCEE-
Confidence            543           45677899999999999999 69999999999999999999999998 88899999999999955 


Q ss_pred             ecc
Q psy10867        337 DYD  339 (343)
Q Consensus       337 ~~~  339 (343)
                      +++
T Consensus       282 ~~~  284 (313)
T 3odt_A          282 VGS  284 (313)
T ss_dssp             EEE
T ss_pred             EEe
Confidence            444

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=100.00  E-value=1.3e-42  Score=291.95  Aligned_cols=281  Identities=17%  Similarity=0.182  Sum_probs=239.6

Q ss_pred             EEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcc------cceecccCCcceEEEEECCC----C---CEE
Q psy10867         27 LLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQE------KAQLRLICPGRISSMQASPD----A---AYI   93 (343)
Q Consensus        27 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~------~~~~~~~~~~~v~~~~~s~~----~---~~l   93 (343)
                      ....+.+|.. .|.+++|+|  .++++++.||.|++|++.+++      ....+..|...|.+++|+|+    +   ++|
T Consensus         8 ~~~~~~~h~~-~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l   84 (397)
T 1sq9_A            8 TANAGKAHDA-DIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLV   84 (397)
T ss_dssp             EEEESSCSSS-CEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEE
T ss_pred             hhhhhhhhhc-CeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEE
Confidence            4556789999 999999999  677777777999999999887      56667789999999999999    8   888


Q ss_pred             EE-ecCCeEEEEEccCCce-----EEEeccc-----CCCeEEEEEe----cCCCE-EEEecCCCeEEEeecCc------c
Q psy10867         94 AV-SIETKLHMWQISSGRL-----LATASSH-----YQPITIVKWS----ADSNF-IVTGGEDGTICVWQLSR------L  151 (343)
Q Consensus        94 ~~-~~d~~i~v~~~~~~~~-----~~~~~~~-----~~~v~~~~~~----~~~~~-l~s~~~dg~i~iwd~~~------~  151 (343)
                      ++ +.|+.|++|++.+++.     ...+..|     ...|.+++|+    |++++ |++++.||.|++||+++      .
T Consensus        85 ~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~  164 (397)
T 1sq9_A           85 ATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNS  164 (397)
T ss_dssp             EEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHH
T ss_pred             EEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCcccccccc
Confidence            86 6899999999999887     8888888     5899999999    99999 99999999999999987      4


Q ss_pred             ceeeeeecCCCCCCCCccccccceeeee-------cccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee
Q psy10867        152 ICKQTVAFGIPGSSGKGVTGLTEPLHVK-------SQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI  224 (343)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~  224 (343)
                      .....                 .+...+       ..|...|.+++|+|++   ++++++.|+.|++||+++++.+..+.
T Consensus       165 ~~~~~-----------------~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~l~~~~~dg~i~i~d~~~~~~~~~~~  224 (397)
T 1sq9_A          165 LTLNW-----------------SPTLELQGTVESPMTPSQFATSVDISERG---LIATGFNNGTVQISELSTLRPLYNFE  224 (397)
T ss_dssp             TTTCC-----------------CCEEEEEEEECCSSSSCCCCCEEEECTTS---EEEEECTTSEEEEEETTTTEEEEEEE
T ss_pred             ceeec-----------------cCcceeeeeeccccCCCCCceEEEECCCc---eEEEEeCCCcEEEEECCCCceeEEEe
Confidence            33220                 011133       4588999999999986   89999999999999999999888887


Q ss_pred             c-------CCcEEEEEEcCCCCEEEEEcCC---CcEEEEEeecccccccccccCCCCCCcccc-------------ccCc
Q psy10867        225 L-------DTRLTCVAFDGTEDNIYMGTSE---GVIKSFCLRQVPRTRDHHIQDSTSNPDFIG-------------HEKQ  281 (343)
Q Consensus       225 ~-------~~~i~~~~~~~~~~~l~~~~~d---~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~  281 (343)
                      .       ...+.+++|+|++++|++++.|   +.|++||++....           +..+.+             |...
T Consensus       225 ~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~  293 (397)
T 1sq9_A          225 SQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGER-----------IGSLSVPTHSSQASLGEFAHSSW  293 (397)
T ss_dssp             CCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCE-----------EEEECBC--------CCBSBSSC
T ss_pred             ccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcc-----------cceeccCcccccccccccccCCc
Confidence            5       7889999999999999999999   9999999987544           333445             8999


Q ss_pred             EEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc-------c---------------CCceEEEEEccCC-------
Q psy10867        282 VTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-------H---------------KGPVLGAFLGLLP-------  332 (343)
Q Consensus       282 v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-------~---------------~~~v~~~~~sp~~-------  332 (343)
                      |.+++|+|++++|++++.||.|++||+.+++.+..+.       |               ..+|++++|+|++       
T Consensus       294 v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~  373 (397)
T 1sq9_A          294 VMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGA  373 (397)
T ss_dssp             EEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTC
T ss_pred             EEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccc
Confidence            9999999999999999999999999999999888886       4               7899999999999       


Q ss_pred             ---CeeeecccC
Q psy10867        333 ---PAIHDYDFT  341 (343)
Q Consensus       333 ---~~l~~~~~~  341 (343)
                         ++|++++..
T Consensus       374 ~~~~~l~s~~~d  385 (397)
T 1sq9_A          374 DLNESLCCVCLD  385 (397)
T ss_dssp             TTSCEEEEEETT
T ss_pred             cccceEEEecCC
Confidence               688887643

>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.6e-43  Score=304.07  Aligned_cols=279  Identities=9%  Similarity=0.016  Sum_probs=212.8

Q ss_pred             EEEecCCCCeEEEEecCCceE----EEEEecCCCCcceEEEEeCC------ceEEEEEcCCCeEEEEeCCCcccc-----
Q psy10867          7 VAFSYDGSGAISVWEPKGGTL----LMSYKGASVLSPHSMCLLGN------DYVLGVEKGKPMIQAWPVNSQEKA-----   71 (343)
Q Consensus         7 ~~~s~~~dg~i~iwd~~~~~~----~~~~~~~~~~~v~~~~~~~~------~~~~~~~~~~~~i~iw~~~~~~~~-----   71 (343)
                      ++.|++.|++|+|||+.+++.    ...+.+|.+ .|.+++|+|+      +.+||+++.||+|++||+.+++..     
T Consensus       175 ~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~-~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~  253 (524)
T 2j04_B          175 MFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFG-EVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFK  253 (524)
T ss_dssp             -------CEEEEEEEEETTTCCEEEEEEEEECCC-SEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEE
T ss_pred             hhccCCCCceEEEEEccCCCCCceEEEEEEecCC-cEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccce
Confidence            456778899999999987654    245677777 9999999996      578999988899999999876421     


Q ss_pred             ------eecccCCcceEEEEECCCCCEEEEecCCeEEEEEccCCc-eEEEecccCCCeEEE--EEecCC-CEEEEecCCC
Q psy10867         72 ------QLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSGR-LLATASSHYQPITIV--KWSADS-NFIVTGGEDG  141 (343)
Q Consensus        72 ------~~~~~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~-~~~~~~~~~~~v~~~--~~~~~~-~~l~s~~~dg  141 (343)
                            ..+.+|...|.+++|++++.+++++.||+|++||++++. +...+.+|.+.|.++  .|+|++ ++|++++.|+
T Consensus       254 ~~~~p~~~l~~h~~~v~sv~~s~~~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~  333 (524)
T 2j04_B          254 MCEKPSLTLSLADSLITTFDFLSPTTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDG  333 (524)
T ss_dssp             CCCSCSEEECCTTTCEEEEEESSSSEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTS
T ss_pred             eecCceEEEEcCCCCEEEEEecCCCeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCC
Confidence                  245578899999999987643334789999999998774 455688999999999  567887 8999999999


Q ss_pred             eEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccc--cceEEEEeecCCCceEEEEeeCCCeEEEEecCCCce
Q psy10867        142 TICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHS--LPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGED  219 (343)
Q Consensus       142 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~  219 (343)
                      +|++||+++++...                      .+.+|.  ..|.+++|+|++  ..+++++.|++|++||++++.+
T Consensus       334 tvklWD~~~~~~~~----------------------~~~~~~~~~~v~~v~fsp~~--~~l~s~~~d~tv~lwd~~~~~~  389 (524)
T 2j04_B          334 YFYIFNPKDIATTK----------------------TTVSRFRGSNLVPVVYCPQI--YSYIYSDGASSLRAVPSRAAFA  389 (524)
T ss_dssp             EEEEECGGGHHHHC----------------------EEEEECSCCSCCCEEEETTT--TEEEEECSSSEEEEEETTCTTC
T ss_pred             eEEEEECCCCCccc----------------------ccccccccCcccceEeCCCc--CeEEEeCCCCcEEEEECccccc
Confidence            99999999865432                      223343  257899999998  6899999999999999999988


Q ss_pred             EEEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccc--------------ccccc-----------------
Q psy10867        220 LLSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTR--------------DHHIQ-----------------  267 (343)
Q Consensus       220 ~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~--------------~~~~~-----------------  267 (343)
                      +..+. |...|.+++|+|++++|++|+.|++|++||+.......              .....                 
T Consensus       390 ~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~  469 (524)
T 2j04_B          390 VHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPL  469 (524)
T ss_dssp             CEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSSTTTCC------CCCCEEEECBCCSSSCEEEECCCCCCCC-
T ss_pred             ceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHhhccccccCccceeeeEEEEeccCCCCCeEEccCCceeccc
Confidence            66655 88899999999999999999999999999965321100              00000                 


Q ss_pred             --CCCCCCccccccCcEEEEEEccCCC---EEEEEeCCCcEEEEeccc
Q psy10867        268 --DSTSNPDFIGHEKQVTSLSCSITGI---TLLSSSADETLKIWHTIS  310 (343)
Q Consensus       268 --~~~~~~~~~~~~~~v~~~~~s~~~~---~l~s~~~dg~i~iwd~~~  310 (343)
                        .+..+..+.+|...|.+++|+|+++   .+|+|+.||.|+||++.-
T Consensus       470 ~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~~  517 (524)
T 2j04_B          470 TVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLLTLEYLSL  517 (524)
T ss_dssp             ------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEECSC
T ss_pred             ccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccCceEEEEEccc
Confidence              1334566788999999999999964   999999999999999853

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.7e-43  Score=297.14  Aligned_cols=280  Identities=17%  Similarity=0.230  Sum_probs=236.7

Q ss_pred             cceEEEEeCCce-EEEEE----------cCCCeEEEEeCCCcccc--eecccCCcceEEEEECCCCCEEEE-ecCCeEEE
Q psy10867         38 SPHSMCLLGNDY-VLGVE----------KGKPMIQAWPVNSQEKA--QLRLICPGRISSMQASPDAAYIAV-SIETKLHM  103 (343)
Q Consensus        38 ~v~~~~~~~~~~-~~~~~----------~~~~~i~iw~~~~~~~~--~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v  103 (343)
                      .|.+++|+|++. +++++          +.|+.|++||+.+++..  .....|...|.+++|+|++++|++ +.|+.|++
T Consensus        14 ~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~v   93 (416)
T 2pm9_A           14 RTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDNGSLEL   93 (416)
T ss_dssp             ESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESSSCEEE
T ss_pred             hcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccCCeEEE
Confidence            788999999986 88988          77899999999987632  222368899999999999999987 57899999


Q ss_pred             EEccC----CceEEEecccCCCeEEEEEecC-CCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeee
Q psy10867        104 WQISS----GRLLATASSHYQPITIVKWSAD-SNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHV  178 (343)
Q Consensus       104 ~~~~~----~~~~~~~~~~~~~v~~~~~~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (343)
                      |++.+    .+.+..+.+|...|.+++|+|+ +++|++++.||.|++||+.+........             .......
T Consensus        94 w~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~-------------~~~~~~~  160 (416)
T 2pm9_A           94 YSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNY-------------TPLTPGQ  160 (416)
T ss_dssp             ECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTC-------------CCBCCCC
T ss_pred             eecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccc-------------ccccccc
Confidence            99987    4578889999999999999998 8999999999999999998864110000             0001223


Q ss_pred             ecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeec-------CCcEEEEEEcCCC-CEEEEEcCCC--
Q psy10867        179 KSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLIL-------DTRLTCVAFDGTE-DNIYMGTSEG--  248 (343)
Q Consensus       179 ~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~-------~~~i~~~~~~~~~-~~l~~~~~d~--  248 (343)
                      ...|...|.+++|+|++. .++++++.|+.|++||+++++.+..+..       ...+.+++|+|++ .++++++.|+  
T Consensus       161 ~~~~~~~v~~~~~~~~~~-~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~  239 (416)
T 2pm9_A          161 SMSSVDEVISLAWNQSLA-HVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDND  239 (416)
T ss_dssp             SCCSSCCCCEEEECSSCT-TEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSS
T ss_pred             ccCCCCCeeEEEeCCCCC-cEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCC
Confidence            457889999999999933 7999999999999999999998888874       6789999999997 6899999998  


Q ss_pred             -cEEEEEeecccccccccccCCCCCCccc-cccCcEEEEEEcc-CCCEEEEEeCCCcEEEEecccceeeeecc-cCCceE
Q psy10867        249 -VIKSFCLRQVPRTRDHHIQDSTSNPDFI-GHEKQVTSLSCSI-TGITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVL  324 (343)
Q Consensus       249 -~i~i~d~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~s~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~  324 (343)
                       .|++||++....          +...+. +|...|++++|+| ++++|++++.||.|++||+.+++.+..+. |...|.
T Consensus       240 ~~i~~~d~~~~~~----------~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~  309 (416)
T 2pm9_A          240 PSILIWDLRNANT----------PLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCF  309 (416)
T ss_dssp             CCCCEEETTSTTS----------CSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCC
T ss_pred             ceEEEEeCCCCCC----------CcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceE
Confidence             999999987432          144566 8999999999999 99999999999999999999999999998 899999


Q ss_pred             EEEEccCC-CeeeecccC
Q psy10867        325 GAFLGLLP-PAIHDYDFT  341 (343)
Q Consensus       325 ~~~~sp~~-~~l~~~~~~  341 (343)
                      +++|+|++ ++|++++..
T Consensus       310 ~~~~s~~~~~~l~s~~~d  327 (416)
T 2pm9_A          310 KTKFAPEAPDLFACASFD  327 (416)
T ss_dssp             CEEECTTCTTEEEECCSS
T ss_pred             EEEECCCCCCEEEEEecC
Confidence            99999999 788888754

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=100.00  E-value=4e-42  Score=314.40  Aligned_cols=302  Identities=16%  Similarity=0.155  Sum_probs=255.3

Q ss_pred             ccceEEEecCC--------CCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceec
Q psy10867          3 LLNEVAFSYDG--------SGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLR   74 (343)
Q Consensus         3 ~v~~~~~s~~~--------dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~   74 (343)
                      +|.++.|+|++        +|.|+|||+.+++.+..+.+|.. .|.+++|+|++.++++++.||.|++||+.+++.+..+
T Consensus        15 ~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~-~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~   93 (814)
T 3mkq_A           15 RVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTET-PVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDF   93 (814)
T ss_dssp             CEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSS-CEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred             ceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCC-cEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEE
Confidence            56667777666        79999999999999999999999 9999999999999999999999999999999988888


Q ss_pred             ccCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCC-ceEEEecccCCCeEEEEEec-CCCEEEEecCCCeEEEeecCcc
Q psy10867         75 LICPGRISSMQASPDAAYIAV-SIETKLHMWQISSG-RLLATASSHYQPITIVKWSA-DSNFIVTGGEDGTICVWQLSRL  151 (343)
Q Consensus        75 ~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~-~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~  151 (343)
                      ..|.+.|.+++|+|++++|++ +.|+.|++||+.++ .....+.+|...|.+++|+| +++.|++++.||.|++||+.+.
T Consensus        94 ~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~  173 (814)
T 3mkq_A           94 EAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQS  173 (814)
T ss_dssp             ECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCS
T ss_pred             ecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCC
Confidence            899999999999999998887 67899999999987 66778889999999999999 8899999999999999999876


Q ss_pred             ceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeec--CCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCc
Q psy10867        152 ICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSK--LGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTR  228 (343)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~  228 (343)
                      ....                     .....+...+.+++|+|  ++  .++++++.||.|++||+++++.+..+. +...
T Consensus       174 ~~~~---------------------~~~~~~~~~v~~~~~~~~~~~--~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~  230 (814)
T 3mkq_A          174 TPNF---------------------TLTTGQERGVNYVDYYPLPDK--PYMITASDDLTIKIWDYQTKSCVATLEGHMSN  230 (814)
T ss_dssp             SCSE---------------------EEECCCTTCCCEEEECCSTTC--CEEEEECTTSEEEEEETTTTEEEEEEECCSSC
T ss_pred             ccee---------------------EEecCCCCCEEEEEEEECCCC--CEEEEEeCCCEEEEEECCCCcEEEEEcCCCCC
Confidence            4322                     22234558899999999  66  899999999999999999999888887 7788


Q ss_pred             EEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCE-EEEEeCCCcEEEEe
Q psy10867        229 LTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGIT-LLSSSADETLKIWH  307 (343)
Q Consensus       229 i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~-l~s~~~dg~i~iwd  307 (343)
                      +.+++|+|+++++++++.||.|++||+.+...           ...+..|...+.+++|+|+++. +++++.++.+.+|+
T Consensus       231 v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~-----------~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (814)
T 3mkq_A          231 VSFAVFHPTLPIIISGSEDGTLKIWNSSTYKV-----------EKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLS  299 (814)
T ss_dssp             EEEEEECSSSSEEEEEETTSCEEEEETTTCSE-----------EEEECCSSSSEEEEEECTTCGGGEEEEEETTEEEEEE
T ss_pred             EEEEEEcCCCCEEEEEeCCCeEEEEECCCCcE-----------EEEeecCCCcEEEEEEccCCCceEEEEEeCCCEEEEE
Confidence            99999999999999999999999999887543           4456678889999999999873 24444566788888


Q ss_pred             ccccee----------eee---------------------------------cc-cCCceEEEEEccCCCeeeecc
Q psy10867        308 TISRQC----------LRT---------------------------------IQ-HKGPVLGAFLGLLPPAIHDYD  339 (343)
Q Consensus       308 ~~~~~~----------~~~---------------------------------~~-~~~~v~~~~~sp~~~~l~~~~  339 (343)
                      +..+..          +..                                 +. +...+.+++|+|+|++|++++
T Consensus       300 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~  375 (814)
T 3mkq_A          300 LGNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSLQTKELGSVDVFPQSLAHSPNGRFVTVVG  375 (814)
T ss_dssp             CSCCSCCEEECSSSEEEEECCTTSCTTCEEEEECCSCCCCCSSSCBCCCCEEECCCSSCCSEEEECTTSSEEEEEE
T ss_pred             cCCCCceeEECCCCCEEEECcccccceeeeeeecccccccccCccceeeeecCCCCccCCceeEECCCCCEEEEec
Confidence            754321          110                                 01 334578999999999998875

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=100.00  E-value=2.8e-43  Score=286.48  Aligned_cols=253  Identities=15%  Similarity=0.135  Sum_probs=204.8

Q ss_pred             EEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcc--cceecccCCcceEEEEECC--CCCEEEE-ecCCeEEEE
Q psy10867         30 SYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQE--KAQLRLICPGRISSMQASP--DAAYIAV-SIETKLHMW  104 (343)
Q Consensus        30 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~--~~~~~~~~~~~v~~~~~s~--~~~~l~~-~~d~~i~v~  104 (343)
                      .+.+|.+ .|++++|+|++.++++++.|++|+|||+.+++  .+..+.+|.+.|.+++|+|  ++++|++ +.|++|++|
T Consensus         8 ~~~~H~~-~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iW   86 (316)
T 3bg1_A            8 VDTSHED-MIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIW   86 (316)
T ss_dssp             ------C-CEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEE
T ss_pred             ecccccC-eEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEE
Confidence            4568998 99999999999999999999999999998764  3456779999999999986  3777776 789999999


Q ss_pred             EccCC--ceEEEecccCCCeEEEEEecC--CCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeec
Q psy10867        105 QISSG--RLLATASSHYQPITIVKWSAD--SNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKS  180 (343)
Q Consensus       105 ~~~~~--~~~~~~~~~~~~v~~~~~~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (343)
                      |++++  +....+.+|...|.+++|+|+  +.+|++|+.|+.|++||++.....                   .....+.
T Consensus        87 d~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~-------------------~~~~~~~  147 (316)
T 3bg1_A           87 REENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQW-------------------EVKKINN  147 (316)
T ss_dssp             CCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCE-------------------EECCBTT
T ss_pred             ECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCc-------------------ceeeeec
Confidence            99887  456778899999999999997  789999999999999999864211                   1234456


Q ss_pred             ccccceEEEEeecCCC---------------ceEEEEeeCCCeEEEEecCCCc---eEEEee-cCCcEEEEEEcCCC---
Q psy10867        181 QHSLPVTHVTLSKLGA---------------KSRVASVSHDRTCKIFDLCTGE---DLLSLI-LDTRLTCVAFDGTE---  238 (343)
Q Consensus       181 ~~~~~v~~~~~~~~~~---------------~~~l~~~~~d~~i~~wd~~~~~---~~~~~~-~~~~i~~~~~~~~~---  238 (343)
                      +|...|.+++|+|+..               ..+|++++.|+.|++||++...   .+..+. |...|.+++|+|++   
T Consensus       148 ~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~  227 (316)
T 3bg1_A          148 AHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLP  227 (316)
T ss_dssp             SSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCS
T ss_pred             cccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCC
Confidence            7888999999998731               1589999999999999997652   444444 77889999999986   


Q ss_pred             -CEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecc
Q psy10867        239 -DNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTI  309 (343)
Q Consensus       239 -~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~  309 (343)
                       ++|++++.|++|++||+.......       .....+..|...|.+++|+|++++||+++.|+.|++|+..
T Consensus       228 ~~~las~s~D~~v~iw~~~~~~~~~-------~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~  292 (316)
T 3bg1_A          228 TSTIASCSQDGRVFIWTCDDASSNT-------WSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKES  292 (316)
T ss_dssp             CCEEEEEETTCEEEEEECSSTTCCC-------CBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred             CceEEEEcCCCeEEEEEccCccccc-------hhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence             899999999999999987632110       0022356788999999999999999999999999999975

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.2e-41  Score=276.89  Aligned_cols=269  Identities=17%  Similarity=0.232  Sum_probs=230.9

Q ss_pred             EEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCc---ccceecccCCcceEE
Q psy10867          7 VAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQ---EKAQLRLICPGRISS   83 (343)
Q Consensus         7 ~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~---~~~~~~~~~~~~v~~   83 (343)
                      .+++++.||.|++||+.+++....+..|.. .|.+++|+|++.++++++.|+.+++|++...   +....+..|...|.+
T Consensus        31 ~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~  109 (313)
T 3odt_A           31 KVASVSRDGTVRLWSKDDQWLGTVVYTGQG-FLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCS  109 (313)
T ss_dssp             EEEEEETTSEEEEEEESSSEEEEEEEECSS-CEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEE
T ss_pred             EEEEEEcCCcEEEEECCCCEEEEEeecCCc-cEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEE
Confidence            456666799999999999999999999998 9999999999999999999999999998765   344566789999999


Q ss_pred             EEECCCCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEec-CCCEEEEecCCCeEEEeecCccceeeeeecCC
Q psy10867         84 MQASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSA-DSNFIVTGGEDGTICVWQLSRLICKQTVAFGI  161 (343)
Q Consensus        84 ~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~  161 (343)
                      ++|  ++.++++ +.|+.|++||  .++....+..|...+.+++|.| +++.+++++.||.|++||...           
T Consensus       110 ~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~-----------  174 (313)
T 3odt_A          110 LSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQNDK-----------  174 (313)
T ss_dssp             EEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETTE-----------
T ss_pred             EEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEecCc-----------
Confidence            999  4566665 7899999999  6788888899999999999998 999999999999999999543           


Q ss_pred             CCCCCCccccccceeeeecc-cccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCC
Q psy10867        162 PGSSGKGVTGLTEPLHVKSQ-HSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTED  239 (343)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~  239 (343)
                                   ....+.. |...+.+++|+|++  . +++++.|+.|++||+++++.+..+. +...+.+++|+|++ 
T Consensus       175 -------------~~~~~~~~~~~~i~~~~~~~~~--~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-  237 (313)
T 3odt_A          175 -------------VIKTFSGIHNDVVRHLAVVDDG--H-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-  237 (313)
T ss_dssp             -------------EEEEECSSCSSCEEEEEEEETT--E-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-
T ss_pred             -------------eEEEEeccCcccEEEEEEcCCC--e-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCC-
Confidence                         3444445 88999999999998  5 9999999999999999999998887 78889999999999 


Q ss_pred             EEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeeccc
Q psy10867        240 NIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQH  319 (343)
Q Consensus       240 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~  319 (343)
                      .|++++.||.|++||+++...           ...+..|...|++++|+|+++ +++++.||.|++||+.+++.+.....
T Consensus       238 ~l~~~~~dg~v~iwd~~~~~~-----------~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~~~~~~~~~  305 (313)
T 3odt_A          238 DIVSCGEDRTVRIWSKENGSL-----------KQVITLPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEKSRWASEDEI  305 (313)
T ss_dssp             CEEEEETTSEEEEECTTTCCE-----------EEEEECSSSCEEEEEECTTSC-EEEEETTSCEEEEESCGGGCCC----
T ss_pred             CEEEEecCCEEEEEECCCCce-----------eEEEeccCceEEEEEEccCCC-EEEEeCCCcEEEEeCCCCceeehhhh
Confidence            588999999999999887543           445677888999999999998 66799999999999999887766653


Q ss_pred             C
Q psy10867        320 K  320 (343)
Q Consensus       320 ~  320 (343)
                      .
T Consensus       306 ~  306 (313)
T 3odt_A          306 K  306 (313)
T ss_dssp             -
T ss_pred             h
Confidence            3

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=100.00  E-value=6.1e-42  Score=303.79  Aligned_cols=297  Identities=16%  Similarity=0.169  Sum_probs=255.3

Q ss_pred             ccceEEEecCC-------CCeEEEEecCCc----eEEEEEecCCCCc-ceEEEEeC--CceEEEEEcCCCeEEEEeCCCc
Q psy10867          3 LLNEVAFSYDG-------SGAISVWEPKGG----TLLMSYKGASVLS-PHSMCLLG--NDYVLGVEKGKPMIQAWPVNSQ   68 (343)
Q Consensus         3 ~v~~~~~s~~~-------dg~i~iwd~~~~----~~~~~~~~~~~~~-v~~~~~~~--~~~~~~~~~~~~~i~iw~~~~~   68 (343)
                      .|.++.|++++       ++.|++||+.++    +.+..+.+|.. . |.+++|+|  ++.++++++.||.|++||+.++
T Consensus        20 ~v~~~~~spdg~~l~~~~~~~v~v~~~~~~~~~~~~~~~~~~h~~-~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~   98 (615)
T 1pgu_A           20 FTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGS-SVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFD   98 (615)
T ss_dssp             CCCCCEEETTTTEEEEEETTEEEEEECCSSCCSSCSEEEECTTTT-SCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEE
T ss_pred             ceeEEEECCCCCEEEEecCCeEEEEECCCCCCccccceEEecCCC-ceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCC
Confidence            46677777777       689999999999    89999999999 8 99999999  9999999999999999999755


Q ss_pred             --------ccceecccCCcceEEEEECCCCCEEEEe-cC----CeEEEEEccCCceEEEecccCCCeEEEEEecCCC-EE
Q psy10867         69 --------EKAQLRLICPGRISSMQASPDAAYIAVS-IE----TKLHMWQISSGRLLATASSHYQPITIVKWSADSN-FI  134 (343)
Q Consensus        69 --------~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~d----~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l  134 (343)
                              +....+..|...|.+++|+|++++|+++ .+    +.|++||  .++.+..+.+|...|.+++|+|+++ .+
T Consensus        99 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l  176 (615)
T 1pgu_A           99 KESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLGEVSGHSQRINACHLKQSRPMRS  176 (615)
T ss_dssp             GGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEEECCSCSSCEEEEEECSSSSCEE
T ss_pred             cccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcceeeecCCccEEEEEECCCCCcEE
Confidence                    4556666899999999999999999974 44    5788877  6788899999999999999999998 89


Q ss_pred             EEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeeccccc---ceEEEEeecC-CCceEEEEeeCCCeEE
Q psy10867        135 VTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSL---PVTHVTLSKL-GAKSRVASVSHDRTCK  210 (343)
Q Consensus       135 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~-~~~~~l~~~~~d~~i~  210 (343)
                      ++++.|+.|++||+.+.+                      ....+..|..   .|.+++|+|+ +  .++++++.|+.|+
T Consensus       177 ~~~~~d~~v~vwd~~~~~----------------------~~~~~~~~~~~~~~v~~~~~~~~~~--~~l~~~~~dg~i~  232 (615)
T 1pgu_A          177 MTVGDDGSVVFYQGPPFK----------------------FSASDRTHHKQGSFVRDVEFSPDSG--EFVITVGSDRKIS  232 (615)
T ss_dssp             EEEETTTEEEEEETTTBE----------------------EEEEECSSSCTTCCEEEEEECSTTC--CEEEEEETTCCEE
T ss_pred             EEEeCCCcEEEEeCCCcc----------------------eeeeecccCCCCceEEEEEECCCCC--CEEEEEeCCCeEE
Confidence            999999999999998764                      4455667888   9999999999 8  8999999999999


Q ss_pred             EEecCCCceEEEe-----ecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEE
Q psy10867        211 IFDLCTGEDLLSL-----ILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSL  285 (343)
Q Consensus       211 ~wd~~~~~~~~~~-----~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  285 (343)
                      +||+++++.+..+     .+...+.+++|+ ++++|++++.|+.|++||+++......+..       ....+...+.++
T Consensus       233 vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~-------~~~~~~~~~~~~  304 (615)
T 1pgu_A          233 CFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTL-------DKQQLGNQQVGV  304 (615)
T ss_dssp             EEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEEC-------CTTCGGGCEEEE
T ss_pred             EEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcC-------CCCcccCceeEE
Confidence            9999999999998     678899999999 999999999999999999987554332210       001235678888


Q ss_pred             EEccCCCEEEEEeCCCcEEEEecccceeeeecc-cCCceEEEEEccCCCeeeecc
Q psy10867        286 SCSITGITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVLGAFLGLLPPAIHDYD  339 (343)
Q Consensus       286 ~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~  339 (343)
                      .|+ +++++++++.||.|++||+.+++.+..+. |...|.+++| |+   |++++
T Consensus       305 ~~~-~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~-~~---l~~~~  354 (615)
T 1pgu_A          305 VAT-GNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTV-NP---LISGS  354 (615)
T ss_dssp             EEE-ETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEET-TT---TEEEE
T ss_pred             EeC-CCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEe-cC---cEEEC
Confidence            885 88999999999999999999999998888 8889999999 77   55554

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=100.00  E-value=5.5e-43  Score=333.20  Aligned_cols=295  Identities=17%  Similarity=0.266  Sum_probs=259.3

Q ss_pred             EEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccc---------------
Q psy10867          7 VAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKA---------------   71 (343)
Q Consensus         7 ~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~---------------   71 (343)
                      .+++++.+|.|++||+.+++.+..+.+|.. .|.+++|+|++.++++++.|+.|++|++.+....               
T Consensus       854 ~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~-~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~  932 (1249)
T 3sfz_A          854 LAVIALSQYCVELWNIDSRLKVADCRGHLS-WVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQE  932 (1249)
T ss_dssp             EEEEECSSSCEEEEETTTTEEEEEECCCSS-CEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEET
T ss_pred             EEEEEeCCCeEEEEEcCCCceeeecCCCcc-ceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcC
Confidence            444555589999999999999999999999 9999999999999999998999999997542110               


Q ss_pred             ----------------------eecccCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEe
Q psy10867         72 ----------------------QLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWS  128 (343)
Q Consensus        72 ----------------------~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~  128 (343)
                                            .....+...+.+++|+|+++++++ +.+|.|++|++.+++....+.+|...|.+++|+
T Consensus       933 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s 1012 (1249)
T 3sfz_A          933 NETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFT 1012 (1249)
T ss_dssp             TEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEEC
T ss_pred             CCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEEC
Confidence                                  011123457999999999999997 678999999999999999999999999999999


Q ss_pred             cCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCe
Q psy10867        129 ADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRT  208 (343)
Q Consensus       129 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~  208 (343)
                      |+++++++++.||.|++||+.++..                       .....|...|.+++++|++   .+++++.|+.
T Consensus      1013 ~dg~~l~s~~~dg~i~vwd~~~~~~-----------------------~~~~~~~~~v~~~~~~~~~---~l~~~~~dg~ 1066 (1249)
T 3sfz_A         1013 ADGKTLISSSEDSVIQVWNWQTGDY-----------------------VFLQAHQETVKDFRLLQDS---RLLSWSFDGT 1066 (1249)
T ss_dssp             SSSSCEEEECSSSBEEEEETTTTEE-----------------------ECCBCCSSCEEEEEECSSS---EEEEEESSSE
T ss_pred             CCCCEEEEEcCCCEEEEEECCCCce-----------------------EEEecCCCcEEEEEEcCCC---cEEEEECCCc
Confidence            9999999999999999999998633                       2345789999999999976   6889999999


Q ss_pred             EEEEecCCCceEEEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEE
Q psy10867        209 CKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSC  287 (343)
Q Consensus       209 i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  287 (343)
                      |++||+.+++....+. +...+.+++|+|+++++++++.|+.|++||+.....           +..+.+|...|++++|
T Consensus      1067 v~vwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~~~-----------~~~l~~h~~~v~~~~~ 1135 (1249)
T 3sfz_A         1067 VKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLSP-----------LHELKGHNGCVRCSAF 1135 (1249)
T ss_dssp             EEEEETTTTCCCEEEECCSSCCCCEEECSSSSSCEEECCSSCCCEECSSSSSC-----------SBCCCCCSSCEEEEEE
T ss_pred             EEEEECCCCceeEEEcccCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCcce-----------eeeeccCCCcEEEEEE
Confidence            9999999999988887 788899999999999999999999999999986443           5567889999999999


Q ss_pred             ccCCCEEEEEeCCCcEEEEecccceeeeec---------c-cCCceEEEEEccCCCeeeecc
Q psy10867        288 SITGITLLSSSADETLKIWHTISRQCLRTI---------Q-HKGPVLGAFLGLLPPAIHDYD  339 (343)
Q Consensus       288 s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~---------~-~~~~v~~~~~sp~~~~l~~~~  339 (343)
                      +|++++|++++.||.|++||+.+++.+..+         . |.+.|++++|+|++++|++++
T Consensus      1136 s~dg~~lat~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~fs~dg~~l~s~~ 1197 (1249)
T 3sfz_A         1136 SLDGILLATGDDNGEIRIWNVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKTLVSAG 1197 (1249)
T ss_dssp             CSSSSEEEEEETTSCCCEEESSSSCCCCCCCCCC-------CCSCCCEEEECTTSSCEEEES
T ss_pred             CCCCCEEEEEeCCCEEEEEECCCCceEEEeccccccccccccCceEEEEEECCCCCEEEECC
Confidence            999999999999999999999999888775         3 788999999999999999875

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=100.00  E-value=6.9e-42  Score=285.10  Aligned_cols=278  Identities=10%  Similarity=0.063  Sum_probs=235.5

Q ss_pred             EecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcc--cceecccCCcceEEEEECCCCCEEEE-ecCCeEEEEEcc
Q psy10867         31 YKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQE--KAQLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQIS  107 (343)
Q Consensus        31 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~--~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~  107 (343)
                      +..|.. +|.+++|+|++.++++++.++.|++||+.+++  ....+..|...|.+++|+|++++|++ +.|+.|++||+.
T Consensus         4 ~~~~~~-~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~   82 (372)
T 1k8k_C            4 HSFLVE-PISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLK   82 (372)
T ss_dssp             EESCSS-CCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEE
T ss_pred             ecccCC-CeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECC
Confidence            455777 99999999999999999888999999999886  66777789999999999999999987 678999999999


Q ss_pred             CCceEEE--ecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccc
Q psy10867        108 SGRLLAT--ASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLP  185 (343)
Q Consensus       108 ~~~~~~~--~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (343)
                      +++....  +..|...|.+++|+|++++|++++.|+.|++||++.......                  .......|...
T Consensus        83 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~------------------~~~~~~~~~~~  144 (372)
T 1k8k_C           83 GRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWV------------------CKHIKKPIRST  144 (372)
T ss_dssp             TTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEE------------------EEEECTTCCSC
T ss_pred             CCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCccee------------------eeeeecccCCC
Confidence            8875443  467899999999999999999999999999999987643211                  22333568899


Q ss_pred             eEEEEeecCCCceEEEEeeCCCeEEEEecC------------------CCceEEEee-cCCcEEEEEEcCCCCEEEEEcC
Q psy10867        186 VTHVTLSKLGAKSRVASVSHDRTCKIFDLC------------------TGEDLLSLI-LDTRLTCVAFDGTEDNIYMGTS  246 (343)
Q Consensus       186 v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~------------------~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~  246 (343)
                      |.+++|+|++  .++++++.|+.|++||++                  .++.+..+. +...+.+++|+|++++|++++.
T Consensus       145 i~~~~~~~~~--~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  222 (372)
T 1k8k_C          145 VLSLDWHPNS--VLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSH  222 (372)
T ss_dssp             EEEEEECTTS--SEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEET
T ss_pred             eeEEEEcCCC--CEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeC
Confidence            9999999998  899999999999999953                  667777775 6788999999999999999999


Q ss_pred             CCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEeccc--cee--e--------
Q psy10867        247 EGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTIS--RQC--L--------  314 (343)
Q Consensus       247 d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~--~~~--~--------  314 (343)
                      |+.|++||++....           +..+..|...|.+++|+|++++|+++ .|+.|++|++.+  ++.  +        
T Consensus       223 d~~i~i~d~~~~~~-----------~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~  290 (372)
T 1k8k_C          223 DSTVCLADADKKMA-----------VATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQ  290 (372)
T ss_dssp             TTEEEEEEGGGTTE-----------EEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--
T ss_pred             CCEEEEEECCCCce-----------eEEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCcccc
Confidence            99999999987543           44567888999999999999988887 899999999987  421  0        


Q ss_pred             ----------------------------eec--ccCCceEEEEEc-cCC---CeeeecccC
Q psy10867        315 ----------------------------RTI--QHKGPVLGAFLG-LLP---PAIHDYDFT  341 (343)
Q Consensus       315 ----------------------------~~~--~~~~~v~~~~~s-p~~---~~l~~~~~~  341 (343)
                                                  ..+  .|..+|++++|. ++|   ++|++++..
T Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~D  351 (372)
T 1k8k_C          291 SSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMD  351 (372)
T ss_dssp             ------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETT
T ss_pred             chhhhcchhhhhhhcccccccccCccccccccccccCCcceeEEecCCCcceeeEEEecCC
Confidence                                        222  288999999966 666   899998754

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=100.00  E-value=8.4e-43  Score=289.91  Aligned_cols=286  Identities=13%  Similarity=0.117  Sum_probs=234.2

Q ss_pred             EecCCCCcceEEEEeCC-----ceEEEEEcCCCeEEEEeCCCcccceeccc-----CCcceEEEEECCC----CCEEEE-
Q psy10867         31 YKGASVLSPHSMCLLGN-----DYVLGVEKGKPMIQAWPVNSQEKAQLRLI-----CPGRISSMQASPD----AAYIAV-   95 (343)
Q Consensus        31 ~~~~~~~~v~~~~~~~~-----~~~~~~~~~~~~i~iw~~~~~~~~~~~~~-----~~~~v~~~~~s~~----~~~l~~-   95 (343)
                      ..+|.. .|.+++|+|+     ..+++++.+ +.|++|++.+++.+..+..     |...|.+++|+|+    +.+|++ 
T Consensus        14 ~~~h~~-~v~~i~~~p~~~~~~~~~~~~~~~-~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~   91 (366)
T 3k26_A           14 KEDHNQ-PLFGVQFNWHSKEGDPLVFATVGS-NRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVA   91 (366)
T ss_dssp             ECTTCS-CEEEEEECTTCCTTSCEEEEEEET-TEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEE
T ss_pred             ecCCCC-ceEEEEEecccCCCCceEEEECCC-CEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEe
Confidence            447888 9999999983     346666666 7999999998877644432     5678999999998    567776 


Q ss_pred             ecCCeEEEEEccCCceEEEecccCCCeEEEEEec-CCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccc
Q psy10867         96 SIETKLHMWQISSGRLLATASSHYQPITIVKWSA-DSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTE  174 (343)
Q Consensus        96 ~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (343)
                      +.|+.|++||+.+++.+..+.+|...|.+++|+| ++++|++++.||.|++||+++++....+                 
T Consensus        92 ~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~-----------------  154 (366)
T 3k26_A           92 GSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIF-----------------  154 (366)
T ss_dssp             ETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEE-----------------
T ss_pred             cCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEe-----------------
Confidence            6899999999999999999999999999999999 8999999999999999999986533321                 


Q ss_pred             eeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-----------------------------c
Q psy10867        175 PLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-----------------------------L  225 (343)
Q Consensus       175 ~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-----------------------------~  225 (343)
                        ..+..|...|.+++|+|++  .+|++++.|+.|++||+++++....+.                             +
T Consensus       155 --~~~~~~~~~v~~~~~~~~~--~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (366)
T 3k26_A          155 --GGVEGHRDEVLSADYDLLG--EKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIH  230 (366)
T ss_dssp             --CSTTSCSSCEEEEEECTTS--SEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSC
T ss_pred             --cccccccCceeEEEECCCC--CEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCC
Confidence              1125799999999999998  899999999999999999876543222                             6


Q ss_pred             CCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCC---CCCCccccccCcEEEEEEccC--CCEEEEEeCC
Q psy10867        226 DTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDS---TSNPDFIGHEKQVTSLSCSIT--GITLLSSSAD  300 (343)
Q Consensus       226 ~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~---~~~~~~~~~~~~v~~~~~s~~--~~~l~s~~~d  300 (343)
                      ...|.+++|+  ++++++++.|+.|++||+..............   ..+..+..|...|++++|+|+  +++|++++.|
T Consensus       231 ~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~d  308 (366)
T 3k26_A          231 RNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQV  308 (366)
T ss_dssp             SSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTT
T ss_pred             cceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecC
Confidence            7789999999  77999999999999999987654222111111   124556778899999999999  9999999999


Q ss_pred             CcEEEEecccceeee----ecc-c--CCceEEEEEccCCCeeeecccC
Q psy10867        301 ETLKIWHTISRQCLR----TIQ-H--KGPVLGAFLGLLPPAIHDYDFT  341 (343)
Q Consensus       301 g~i~iwd~~~~~~~~----~~~-~--~~~v~~~~~sp~~~~l~~~~~~  341 (343)
                      |.|++||+.+++...    .+. |  ...|++++|+|++++|++++..
T Consensus       309 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d  356 (366)
T 3k26_A          309 GKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDD  356 (366)
T ss_dssp             SCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETT
T ss_pred             CcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCC
Confidence            999999999876443    555 4  7899999999999999998754

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=100.00  E-value=4.3e-41  Score=274.27  Aligned_cols=275  Identities=21%  Similarity=0.368  Sum_probs=234.1

Q ss_pred             ceEEEecCC------CCeEEEEecCCceEEEEEe--cCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceeccc
Q psy10867          5 NEVAFSYDG------SGAISVWEPKGGTLLMSYK--GASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLI   76 (343)
Q Consensus         5 ~~~~~s~~~------dg~i~iwd~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~   76 (343)
                      +.+.+|+++      |++|+|||+.++++++.++  +|.. .|.+++|+|+++++++|+.||.|++|++++++.+..+.+
T Consensus        29 ~~l~WS~~~~lAvg~D~tV~iWd~~tg~~~~~~~~~~~~~-~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~  107 (318)
T 4ggc_A           29 NLVDWSSGNVLAVALDNSVYLWSASSGDILQLLQMEQPGE-YISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTS  107 (318)
T ss_dssp             BCEEECTTSEEEEEETTEEEEEETTTCCEEEEEECCSTTC-CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC
T ss_pred             eEEEECCCCEEEEEeCCEEEEEECCCCCEEEEEEecCCCC-eEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecC
Confidence            445565554      8999999999999988776  4566 899999999999999999999999999999999988889


Q ss_pred             CCcceEEEEECCCCCEEEE-ecCCeEEEEEccCC-ceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCcccee
Q psy10867         77 CPGRISSMQASPDAAYIAV-SIETKLHMWQISSG-RLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICK  154 (343)
Q Consensus        77 ~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~  154 (343)
                      |...+.++.+  ++.++++ +.++.+++|+...+ ..+..+.+|...+..+.+.++++++++++.||.|++||+++++..
T Consensus       108 h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~  185 (318)
T 4ggc_A          108 HSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGG  185 (318)
T ss_dssp             CSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTB
T ss_pred             ccceEEEeec--CCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCccc
Confidence            9988887665  5667776 67899999998876 456778899999999999999999999999999999999876433


Q ss_pred             eeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEE--EEeeCCCeEEEEecCCCceEEEeecCCcEEEE
Q psy10867        155 QTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRV--ASVSHDRTCKIFDLCTGEDLLSLILDTRLTCV  232 (343)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l--~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~~~  232 (343)
                      ..                  .......+...|.++.++|.+. ..+  ++++.++.|++||.+.........+...+..+
T Consensus       186 ~~------------------~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~  246 (318)
T 4ggc_A          186 WV------------------PLQTFTQHQGAVKAVAWCPWQS-NVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSI  246 (318)
T ss_dssp             SC------------------CSEEECCCCSCEEEEEECTTST-TEEEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEE
T ss_pred             cc------------------ceeeecccCCceEEEEecCCCC-cEEEEEecCCCCEEEEEecccccccccccceeeeeee
Confidence            21                  3445566888999999999875 333  46778999999999999998888899999999


Q ss_pred             EEcCCCCEEEEEc--CCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEeccc
Q psy10867        233 AFDGTEDNIYMGT--SEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTIS  310 (343)
Q Consensus       233 ~~~~~~~~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~  310 (343)
                      .|+|+++.+++++  .|+.|++||+++...           +..+.+|.+.|++++|+|++++|++|+.||+|+|||+.+
T Consensus       247 ~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~-----------~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~  315 (318)
T 4ggc_A          247 LWSPHYKELISGHGFAQNQLVIWKYPTMAK-----------VAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFE  315 (318)
T ss_dssp             EEETTTTEEEEEECTTTCCEEEEETTTCCE-----------EEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSC
T ss_pred             eecccccceEEEEEcCCCEEEEEECCCCcE-----------EEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCC
Confidence            9999999887754  799999999987543           556889999999999999999999999999999999876


Q ss_pred             ce
Q psy10867        311 RQ  312 (343)
Q Consensus       311 ~~  312 (343)
                      ..
T Consensus       316 ~d  317 (318)
T 4ggc_A          316 LD  317 (318)
T ss_dssp             CC
T ss_pred             CC
Confidence            43

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=100.00  E-value=5e-42  Score=313.61  Aligned_cols=324  Identities=10%  Similarity=0.045  Sum_probs=238.8

Q ss_pred             EEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccc-----------eecc
Q psy10867          7 VAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKA-----------QLRL   75 (343)
Q Consensus         7 ~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~-----------~~~~   75 (343)
                      .+++++.|+.|++||+.+++++..+. |.. .|++++|+|++.++++|+.||.|++||+.+++..           ....
T Consensus        71 ~L~S~s~D~~v~lWd~~~~~~~~~~~-~~~-~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~  148 (902)
T 2oaj_A           71 YLVVINAKDTVYVLSLYSQKVLTTVF-VPG-KITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPA  148 (902)
T ss_dssp             EEEEEETTCEEEEEETTTCSEEEEEE-CSS-CEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSS
T ss_pred             EEEEEECcCeEEEEECCCCcEEEEEc-CCC-CEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccc
Confidence            34455558999999999999999887 455 8999999999999999999999999999987653           2335


Q ss_pred             cCCcceEEEEECCCC-CEEEE-ecCCeEEEEEccCCceEEEeccc------------------CCCeEEEEEecCCCEEE
Q psy10867         76 ICPGRISSMQASPDA-AYIAV-SIETKLHMWQISSGRLLATASSH------------------YQPITIVKWSADSNFIV  135 (343)
Q Consensus        76 ~~~~~v~~~~~s~~~-~~l~~-~~d~~i~v~~~~~~~~~~~~~~~------------------~~~v~~~~~~~~~~~l~  135 (343)
                      +|.+.|.+++|+|++ ..|++ +.|+.| +||+++++.+..+..|                  ...|.+++|+|++++|+
T Consensus       149 ~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~la  227 (902)
T 2oaj_A          149 ARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHII  227 (902)
T ss_dssp             SCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEE
T ss_pred             cCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEE
Confidence            788999999999964 55555 678999 9999999988888765                  57799999999999999


Q ss_pred             EecCCCeEEEeecCccceeeeeecC-----CC----------CC------------CCC--c-c-cc-cc-----ceeee
Q psy10867        136 TGGEDGTICVWQLSRLICKQTVAFG-----IP----------GS------------SGK--G-V-TG-LT-----EPLHV  178 (343)
Q Consensus       136 s~~~dg~i~iwd~~~~~~~~~~~~~-----~~----------~~------------~~~--~-~-~~-~~-----~~~~~  178 (343)
                      +++.||.|++||+++++......+.     .+          ..            ...  . . .+ ..     ..+..
T Consensus       228 sgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~  307 (902)
T 2oaj_A          228 TIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTM  307 (902)
T ss_dssp             EEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEE
T ss_pred             EEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEE
Confidence            9999999999999887665421110     00          00            000  0 0 00 00     01111


Q ss_pred             ec------------------------------ccccceEEEEeecC--------CCceEEEEeeCCCeEEEEecCCCceE
Q psy10867        179 KS------------------------------QHSLPVTHVTLSKL--------GAKSRVASVSHDRTCKIFDLCTGEDL  220 (343)
Q Consensus       179 ~~------------------------------~~~~~v~~~~~~~~--------~~~~~l~~~~~d~~i~~wd~~~~~~~  220 (343)
                      +.                              .+...|..+.+.++        .+...+++++.|+.|++||+.++...
T Consensus       308 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~  387 (902)
T 2oaj_A          308 IDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFT  387 (902)
T ss_dssp             EEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEE
T ss_pred             EecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcc
Confidence            11                              23455667776552        01136888889999999999776533


Q ss_pred             EE-------ee-cCCcEE----------------------------------EEEEcCCCCEEEEEcCCCcEEEEEeecc
Q psy10867        221 LS-------LI-LDTRLT----------------------------------CVAFDGTEDNIYMGTSEGVIKSFCLRQV  258 (343)
Q Consensus       221 ~~-------~~-~~~~i~----------------------------------~~~~~~~~~~l~~~~~d~~i~i~d~~~~  258 (343)
                      ..       +. +...|+                                  +++|+|++++|++|+.|++|++||+...
T Consensus       388 ~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g  467 (902)
T 2oaj_A          388 DKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHG  467 (902)
T ss_dssp             CCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCC
T ss_pred             cccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCc
Confidence            22       00 123333                                  4456789999999999999999999875


Q ss_pred             cccccccccCCCCCCc--c-----ccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccce-------------------
Q psy10867        259 PRTRDHHIQDSTSNPD--F-----IGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQ-------------------  312 (343)
Q Consensus       259 ~~~~~~~~~~~~~~~~--~-----~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~-------------------  312 (343)
                      ......       ...  +     .+|...|++++|+||+++||+|+.||+|++||+.+++                   
T Consensus       468 ~~~~~~-------~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~  540 (902)
T 2oaj_A          468 DIQDNA-------SFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRR  540 (902)
T ss_dssp             TTTTTB-------CEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------CCS
T ss_pred             cccCCc-------eEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeee
Confidence            321100       000  1     2788999999999999999999999999999998762                   


Q ss_pred             --------------------------eeeecc-cCCceEEEEEccCCCeeeecccC
Q psy10867        313 --------------------------CLRTIQ-HKGPVLGAFLGLLPPAIHDYDFT  341 (343)
Q Consensus       313 --------------------------~~~~~~-~~~~v~~~~~sp~~~~l~~~~~~  341 (343)
                                                ++..+. |.+.|++++||||| +|++++..
T Consensus       541 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D  595 (902)
T 2oaj_A          541 FSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAA  595 (902)
T ss_dssp             CCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETT
T ss_pred             ccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCC
Confidence                                      356676 99999999999999 99988743

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=100.00  E-value=3.8e-43  Score=293.30  Aligned_cols=297  Identities=12%  Similarity=0.080  Sum_probs=217.7

Q ss_pred             ccceEEEecC--------CCCeEEEEecCCc--eEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcc---
Q psy10867          3 LLNEVAFSYD--------GSGAISVWEPKGG--TLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQE---   69 (343)
Q Consensus         3 ~v~~~~~s~~--------~dg~i~iwd~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~---   69 (343)
                      +|+++.|+++        .||.|++||+.++  +.+..+.+|.. .|.+++|+|++.++++++.|+.|++||+.+++   
T Consensus        13 ~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~-~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~   91 (377)
T 3dwl_C           13 PSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDK-IVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWK   91 (377)
T ss_dssp             CCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSS-CEEEEEECTTTCCEEEEETTSSEEEC------CCC
T ss_pred             cEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCc-eEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCcee
Confidence            4555555554        4899999999988  78888999999 99999999999999999988999999999877   


Q ss_pred             cceecccCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCCc---eEEEecc-cCCCeEEEEEecCCCEEEEecCCCeEE
Q psy10867         70 KAQLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGR---LLATASS-HYQPITIVKWSADSNFIVTGGEDGTIC  144 (343)
Q Consensus        70 ~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~---~~~~~~~-~~~~v~~~~~~~~~~~l~s~~~dg~i~  144 (343)
                      ....+..|...|.+++|+|++++|++ +.|+.|++||+++++   ....+.. |...|.+++|+|++++|++++.|+.|+
T Consensus        92 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~  171 (377)
T 3dwl_C           92 QTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAY  171 (377)
T ss_dssp             CEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEE
T ss_pred             eeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEE
Confidence            44556689999999999999998887 679999999999886   3667777 999999999999999999999999999


Q ss_pred             EeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCce----E
Q psy10867        145 VWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGED----L  220 (343)
Q Consensus       145 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~----~  220 (343)
                      +||++...........    .........+....+ .|...|.+++|+|++  .+|++++.|+.|++||+++++.    +
T Consensus       172 iwd~~~~~~~~~~~~~----~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~--~~l~~~~~d~~i~iwd~~~~~~~~~~~  244 (377)
T 3dwl_C          172 VLSAYVRDVDAKPEAS----VWGSRLPFNTVCAEY-PSGGWVHAVGFSPSG--NALAYAGHDSSVTIAYPSAPEQPPRAL  244 (377)
T ss_dssp             EEEECCSSCC-CCCSC----SSCSCCCEEEEEECC-CCSSSEEEEEECTTS--SCEEEEETTTEEC-CEECSTTSCEEEC
T ss_pred             EEEEEecccCCCcccc----ccccccchhhhhhcc-cCCceEEEEEECCCC--CEEEEEeCCCcEEEEECCCCCCcceee
Confidence            9999754321110000    000000112344555 899999999999999  7999999999999999999887    5


Q ss_pred             EEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeeccccccccccc--CC----------------------------
Q psy10867        221 LSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQ--DS----------------------------  269 (343)
Q Consensus       221 ~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~--~~----------------------------  269 (343)
                      ..+. +...+.+++|+|++++|++++.++.+ +|+...........+.  ..                            
T Consensus       245 ~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (377)
T 3dwl_C          245 ITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRST  323 (377)
T ss_dssp             CCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC------------
T ss_pred             EeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeCCCceEEEeeeccccccccccccccccccccccccccccccccc
Confidence            5554 67789999999999999998766655 7766522110000000  00                            


Q ss_pred             -----------CCCCccccccCcEEEEEEccCC-C---EEEEEeCCCcEEEEec
Q psy10867        270 -----------TSNPDFIGHEKQVTSLSCSITG-I---TLLSSSADETLKIWHT  308 (343)
Q Consensus       270 -----------~~~~~~~~~~~~v~~~~~s~~~-~---~l~s~~~dg~i~iwd~  308 (343)
                                 ........|...|+++++.+.. .   .|++++.||.|++||+
T Consensus       324 ~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl  377 (377)
T 3dwl_C          324 FRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL  377 (377)
T ss_dssp             -------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred             ccchhhccccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence                       0011123499999999976643 3   6999999999999985

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=100.00  E-value=3.8e-42  Score=293.66  Aligned_cols=278  Identities=11%  Similarity=0.089  Sum_probs=220.8

Q ss_pred             CCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcc-----------cceecccCC------------cceEEEEECCCC
Q psy10867         34 ASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQE-----------KAQLRLICP------------GRISSMQASPDA   90 (343)
Q Consensus        34 ~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~-----------~~~~~~~~~------------~~v~~~~~s~~~   90 (343)
                      +.+ .|.+++|+|++.++++|+.||.|++|++.+++           ....+.+|.            ..|.+++|+|++
T Consensus        27 ~~~-~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~  105 (447)
T 3dw8_B           27 EAD-IISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK  105 (447)
T ss_dssp             GGG-SEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred             ccC-cEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence            345 99999999999999999999999999998876           355666887            889999999997


Q ss_pred             --CEEEE-ecCCeEEEEEccCCceE---------------------------------------EE-ecccCCCeEEEEE
Q psy10867         91 --AYIAV-SIETKLHMWQISSGRLL---------------------------------------AT-ASSHYQPITIVKW  127 (343)
Q Consensus        91 --~~l~~-~~d~~i~v~~~~~~~~~---------------------------------------~~-~~~~~~~v~~~~~  127 (343)
                        .+|++ +.|+.|++||+.++...                                       .. ..+|...|.+++|
T Consensus       106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~  185 (447)
T 3dw8_B          106 NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI  185 (447)
T ss_dssp             SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE
T ss_pred             CcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE
Confidence              56665 78999999999764432                                       12 3679999999999


Q ss_pred             ecCCCEEEEecCCCeEEEeecCccc-eeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCC
Q psy10867        128 SADSNFIVTGGEDGTICVWQLSRLI-CKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHD  206 (343)
Q Consensus       128 ~~~~~~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d  206 (343)
                      +|++++|++| .|+.|++||++... ....+..               ....+.+|...|.+++|+|++. .+|++++.|
T Consensus       186 ~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~---------------~~~~~~~~~~~v~~~~~~p~~~-~~l~s~~~d  248 (447)
T 3dw8_B          186 NSDYETYLSA-DDLRINLWHLEITDRSFNIVDI---------------KPANMEELTEVITAAEFHPNSC-NTFVYSSSK  248 (447)
T ss_dssp             CTTSSEEEEE-CSSEEEEEETTEEEEEEEEEEC---------------CCSSGGGCCCCEEEEEECSSCT-TEEEEEETT
T ss_pred             cCCCCEEEEe-CCCeEEEEECCCCCceeeeeec---------------ccccccccCcceEEEEECCCCC-cEEEEEeCC
Confidence            9999999998 79999999998432 2221100               0113567999999999999874 589999999


Q ss_pred             CeEEEEecCCCce----EEEeec-CC------------cEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCC
Q psy10867        207 RTCKIFDLCTGED----LLSLIL-DT------------RLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDS  269 (343)
Q Consensus       207 ~~i~~wd~~~~~~----~~~~~~-~~------------~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~  269 (343)
                      |.|++||+++++.    ...+.. ..            .|.+++|+|++++|++++. +.|++||++....         
T Consensus       249 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~---------  318 (447)
T 3dw8_B          249 GTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENR---------  318 (447)
T ss_dssp             SCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSS---------
T ss_pred             CeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCcc---------
Confidence            9999999999886    566663 32            8999999999999999998 9999999986221         


Q ss_pred             CCCCccccccCc---------------EEEEEEccCCCEEEEEeCCCcEEEEecccceeeee------------------
Q psy10867        270 TSNPDFIGHEKQ---------------VTSLSCSITGITLLSSSADETLKIWHTISRQCLRT------------------  316 (343)
Q Consensus       270 ~~~~~~~~~~~~---------------v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~------------------  316 (343)
                       ++..+.+|...               +..++|+|++++|++++.||.|++||+.+++.+..                  
T Consensus       319 -~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~  397 (447)
T 3dw8_B          319 -PVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKV  397 (447)
T ss_dssp             -CSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCE
T ss_pred             -ccceeeccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcceeeeecccccccccccCCccc
Confidence             24445555432               33499999999999999999999999998876541                  


Q ss_pred             ---------------cccCCceEEEEEccCCCeeeeccc
Q psy10867        317 ---------------IQHKGPVLGAFLGLLPPAIHDYDF  340 (343)
Q Consensus       317 ---------------~~~~~~v~~~~~sp~~~~l~~~~~  340 (343)
                                     +.....|..++|+|++++|++++-
T Consensus       398 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~  436 (447)
T 3dw8_B          398 CASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAVATT  436 (447)
T ss_dssp             ECSSCCCTTCEEGGGCCTTSCCCEEEECSSSSEEEEECS
T ss_pred             cccCCcccccccccccccCCceeEEEECCCCCEEEEEec
Confidence                           123457899999999999998764

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=100.00  E-value=2.4e-41  Score=281.27  Aligned_cols=288  Identities=15%  Similarity=0.205  Sum_probs=234.5

Q ss_pred             eEEEEecCCceEEEEEecCCCCcceEEEEeCC---ceEEEEEcCCCeEEEEeCCC-cccc-eecccCCcceEEEEECCCC
Q psy10867         16 AISVWEPKGGTLLMSYKGASVLSPHSMCLLGN---DYVLGVEKGKPMIQAWPVNS-QEKA-QLRLICPGRISSMQASPDA   90 (343)
Q Consensus        16 ~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~~~~~~~~~~i~iw~~~~-~~~~-~~~~~~~~~v~~~~~s~~~   90 (343)
                      ....|+....+.+..+.+|.. .|.+++|+|+   |.++++++.||.|++||+.+ ++.. ..+..|...|.+++|+|++
T Consensus        20 ~~~~~~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~   98 (368)
T 3mmy_A           20 SATTDNHNPMKDIEVTSSPDD-SIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDG   98 (368)
T ss_dssp             ---CCSSCTTCCEECSSCCSS-CEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTS
T ss_pred             EeccCCCCCcceeEeccCCCC-ceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCC
Confidence            344566667788889999999 9999999999   59999999889999999987 4444 6677899999999999999


Q ss_pred             CEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEE--ecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCC
Q psy10867         91 AYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKW--SADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGK  167 (343)
Q Consensus        91 ~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~  167 (343)
                      ++|++ +.|+.|++||+.+++.+. +..|...|.+++|  +|++++|++++.||.|++||+++++....           
T Consensus        99 ~~l~s~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~-----------  166 (368)
T 3mmy_A           99 SKVFTASCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMV-----------  166 (368)
T ss_dssp             SEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEE-----------
T ss_pred             CEEEEEcCCCcEEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEE-----------
Confidence            98887 679999999999888765 5579999999999  88999999999999999999998754433           


Q ss_pred             ccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee---cCCcEEEEEEcCCCCE----
Q psy10867        168 GVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI---LDTRLTCVAFDGTEDN----  240 (343)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~---~~~~i~~~~~~~~~~~----  240 (343)
                                 +..+ ..+.++.+.+    ..+++++.++.+++|+++.........   ......++++.++...    
T Consensus       167 -----------~~~~-~~~~~~~~~~----~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (368)
T 3mmy_A          167 -----------LQLP-ERCYCADVIY----PMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTG  230 (368)
T ss_dssp             -----------EECS-SCEEEEEEET----TEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEE
T ss_pred             -----------EecC-CCceEEEecC----CeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCe
Confidence                       2333 3566666654    468888899999999998776544332   3455666766665544    


Q ss_pred             EEEEcCCCcEEEEEeecccccccccccCCCCCCccccccC------------cEEEEEEccCCCEEEEEeCCCcEEEEec
Q psy10867        241 IYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEK------------QVTSLSCSITGITLLSSSADETLKIWHT  308 (343)
Q Consensus       241 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~------------~v~~~~~s~~~~~l~s~~~dg~i~iwd~  308 (343)
                      +++++.||.|++||++.......        ...+.+|..            .|++++|+|++++|++++.||.|++||+
T Consensus       231 ~~~~~~dg~i~i~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~  302 (368)
T 3mmy_A          231 FALGSIEGRVAIHYINPPNPAKD--------NFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDK  302 (368)
T ss_dssp             EEEEETTSEEEEEESSCSCHHHH--------SEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEET
T ss_pred             EEEecCCCcEEEEecCCCCcccc--------ceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEEC
Confidence            99999999999999987532111        233444444            7999999999999999999999999999


Q ss_pred             ccceeeeecc-cCCceEEEEEccCCCeeeeccc
Q psy10867        309 ISRQCLRTIQ-HKGPVLGAFLGLLPPAIHDYDF  340 (343)
Q Consensus       309 ~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~  340 (343)
                      .+++++..+. |..+|++++|+|++++|++++-
T Consensus       303 ~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~  335 (368)
T 3mmy_A          303 DARTKLKTSEQLDQPISACCFNHNGNIFAYASS  335 (368)
T ss_dssp             TTTEEEEECCCCSSCEEEEEECTTSSCEEEEEC
T ss_pred             CCCcEEEEecCCCCCceEEEECCCCCeEEEEec
Confidence            9999999998 8999999999999999999863

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=100.00  E-value=7.4e-42  Score=289.55  Aligned_cols=280  Identities=10%  Similarity=0.113  Sum_probs=233.0

Q ss_pred             ceEEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEE
Q psy10867          5 NEVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSM   84 (343)
Q Consensus         5 ~~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~   84 (343)
                      ...+++++.||.|++||+.+++....+.+|.. .|.+++|+|++.++++++.|+.|++||+.+++.+..+..|...|.++
T Consensus       109 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~-~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~  187 (420)
T 3vl1_A          109 MRRFILGTTEGDIKVLDSNFNLQREIDQAHVS-EITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDI  187 (420)
T ss_dssp             SCEEEEEETTSCEEEECTTSCEEEEETTSSSS-CEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEE
T ss_pred             CCEEEEEECCCCEEEEeCCCcceeeecccccC-ccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEE
Confidence            45677778899999999999999998899999 99999999999999999999999999999999888888999999999


Q ss_pred             EECCCCCEEEE-ecCCeEEEEEccCCceEEEecc---cCCCeEEEE---------------------EecCCCEEEEecC
Q psy10867         85 QASPDAAYIAV-SIETKLHMWQISSGRLLATASS---HYQPITIVK---------------------WSADSNFIVTGGE  139 (343)
Q Consensus        85 ~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~---~~~~v~~~~---------------------~~~~~~~l~s~~~  139 (343)
                      +|+|++++|++ +.|+.|++||+++++.+..+..   |...+.+++                     |+|++++|++++.
T Consensus       188 ~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~  267 (420)
T 3vl1_A          188 AIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHV  267 (420)
T ss_dssp             EEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEET
T ss_pred             EEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcC
Confidence            99999998887 6899999999999998888874   344555555                     5688999999999


Q ss_pred             CCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCce
Q psy10867        140 DGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGED  219 (343)
Q Consensus       140 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~  219 (343)
                      ||.|++||++++....                     .....|...|.+++|+|+++ .+|++++.||.|++||+++++.
T Consensus       268 dg~i~i~d~~~~~~~~---------------------~~~~~~~~~v~~~~~~~~~~-~~l~~g~~dg~i~vwd~~~~~~  325 (420)
T 3vl1_A          268 SGVITVHNVFSKEQTI---------------------QLPSKFTCSCNSLTVDGNNA-NYIYAGYENGMLAQWDLRSPEC  325 (420)
T ss_dssp             TSCEEEEETTTCCEEE---------------------EECCTTSSCEEEEEECSSCT-TEEEEEETTSEEEEEETTCTTS
T ss_pred             CCeEEEEECCCCceeE---------------------EcccccCCCceeEEEeCCCC-CEEEEEeCCCeEEEEEcCCCcC
Confidence            9999999998865432                     23346889999999999982 2999999999999999998754


Q ss_pred             -EEEee--cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCC---E
Q psy10867        220 -LLSLI--LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGI---T  293 (343)
Q Consensus       220 -~~~~~--~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~---~  293 (343)
                       +..+.  +...+.++.+ +++++|++++.|+.|++||+...........  ......+..|...|.+++|+|+++   .
T Consensus       326 ~~~~~~~~~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~--~~~~~~~~~~~~~v~~~~~s~~~~~~g~  402 (420)
T 3vl1_A          326 PVGEFLINEGTPINNVYF-AAGALFVSSGFDTSIKLDIISDPESERPAIE--FETPTFLVSNDDAVSQFCYVSDDESNGE  402 (420)
T ss_dssp             CSEEEEESTTSCEEEEEE-ETTEEEEEETTTEEEEEEEECCTTCCSCEEC--TTSCEEECCSSCCCCEEEEECCSSSSCE
T ss_pred             chhhhhccCCCCceEEEe-CCCCEEEEecCCccEEEEeccCCCCCcccee--ccCccEEccCCcceEEEEEccCCCCcce
Confidence             55554  5667888855 5788999999999999999987544332211  111234567889999999999999   7


Q ss_pred             EEEEeCCCcEEEEeccc
Q psy10867        294 LLSSSADETLKIWHTIS  310 (343)
Q Consensus       294 l~s~~~dg~i~iwd~~~  310 (343)
                      +++.+.+|.+.+|++++
T Consensus       403 l~a~g~~g~~~~~~~~~  419 (420)
T 3vl1_A          403 VLEVGKNNFCALYNLSN  419 (420)
T ss_dssp             EEEEETTTEEEEEESCC
T ss_pred             EEEEcCCceEEEEeccC
Confidence            88888899999999864

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=100.00  E-value=1.5e-42  Score=294.66  Aligned_cols=283  Identities=15%  Similarity=0.115  Sum_probs=219.1

Q ss_pred             EEEEEecCCCCcceEEEEeC-CceEEEEEcCCCeEEEEeCCCcccc--eecccCCcceEEEEECC-CCCEEEE-ecCCeE
Q psy10867         27 LLMSYKGASVLSPHSMCLLG-NDYVLGVEKGKPMIQAWPVNSQEKA--QLRLICPGRISSMQASP-DAAYIAV-SIETKL  101 (343)
Q Consensus        27 ~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~i~iw~~~~~~~~--~~~~~~~~~v~~~~~s~-~~~~l~~-~~d~~i  101 (343)
                      .......|.. .|++++|+| ++.+||+|+.||.|+|||+.+++..  ..+.+|.+.|++++|+| ++.+|++ +.|++|
T Consensus       111 ~~~~~~~~~~-~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v  189 (435)
T 4e54_B          111 ILQKAAPFDR-RATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTT  189 (435)
T ss_dssp             SCCEEEECSS-CEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCE
T ss_pred             ecccCCCCCC-CEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEE
Confidence            3445667887 999999999 5678999999999999999877654  33458999999999998 6788886 689999


Q ss_pred             EEEEccCCceEEEecc--cCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeee
Q psy10867        102 HMWQISSGRLLATASS--HYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVK  179 (343)
Q Consensus       102 ~v~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (343)
                      ++||++++........  +...+.+++|+|++++|++|+.||.|++||++..                       .+..+
T Consensus       190 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~-----------------------~~~~~  246 (435)
T 4e54_B          190 RLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGK-----------------------ELWNL  246 (435)
T ss_dssp             EEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSC-----------------------BCCCS
T ss_pred             EEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcc-----------------------eeEEE
Confidence            9999987654433333  3446789999999999999999999999999753                       44566


Q ss_pred             cccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEe----ecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEe
Q psy10867        180 SQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSL----ILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCL  255 (343)
Q Consensus       180 ~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~----~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~  255 (343)
                      .+|...|.+++|+|+++ .++++++.|+.|++||+++.+....+    .|...|.+++|+|++++|++++.||.|++||+
T Consensus       247 ~~h~~~v~~v~~~p~~~-~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~  325 (435)
T 4e54_B          247 RMHKKKVTHVALNPCCD-WFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSA  325 (435)
T ss_dssp             BCCSSCEEEEEECTTCS-SEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEES
T ss_pred             ecccceEEeeeecCCCc-eEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEEC
Confidence            78999999999999985 58889999999999999887654333    36788999999999999999999999999999


Q ss_pred             ecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEe------------CCCcEEEEecccceeeeecc--cCC
Q psy10867        256 RQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSS------------ADETLKIWHTISRQCLRTIQ--HKG  321 (343)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~------------~dg~i~iwd~~~~~~~~~~~--~~~  321 (343)
                      ................     .....+....|+|++.++++++            .++.|++||..+++.+..+.  |..
T Consensus       326 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~  400 (435)
T 4e54_B          326 SQWDCPLGLIPHPHRH-----FQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESS  400 (435)
T ss_dssp             SSSSSEEEECCCCCCC-----CSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCC
T ss_pred             CCCccceEEecccccc-----cccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCC
Confidence            8765433221100000     0001122334555555554443            34679999999999988875  778


Q ss_pred             ceEEE-EEccCCCeeeecc
Q psy10867        322 PVLGA-FLGLLPPAIHDYD  339 (343)
Q Consensus       322 ~v~~~-~~sp~~~~l~~~~  339 (343)
                      .|.++ +|+|+|++|++++
T Consensus       401 ~v~s~~~fspdg~~lasg~  419 (435)
T 4e54_B          401 GISSLNEFNPMGDTLASAM  419 (435)
T ss_dssp             CCCCEEEECTTSSCEEEEC
T ss_pred             cEEEEEEECCCCCEEEEEc
Confidence            88887 6999999999875

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.5e-42  Score=293.01  Aligned_cols=296  Identities=12%  Similarity=0.142  Sum_probs=236.7

Q ss_pred             EEecCCceEEEEE-ecCCCCcceEEEEeC-CceEEEEEcCCCeEEEEeCCC---cccc--eecccCCcceEEEEECCCCC
Q psy10867         19 VWEPKGGTLLMSY-KGASVLSPHSMCLLG-NDYVLGVEKGKPMIQAWPVNS---QEKA--QLRLICPGRISSMQASPDAA   91 (343)
Q Consensus        19 iwd~~~~~~~~~~-~~~~~~~v~~~~~~~-~~~~~~~~~~~~~i~iw~~~~---~~~~--~~~~~~~~~v~~~~~s~~~~   91 (343)
                      .|+ .+++.+..+ ++|.. .|++++|+| ++.++++++.||.|++||+.+   +...  .....|...|.+++|+|+++
T Consensus        47 ~w~-~~g~~~~~~~~~h~~-~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~  124 (437)
T 3gre_A           47 MGN-LRGKLIATLMENEPN-SITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFD  124 (437)
T ss_dssp             GGG-CCCCEEEEECTTTTS-CEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSS
T ss_pred             ccc-ccceEEeeeccCCCC-ceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCC
Confidence            588 478889999 88888 999999999 999999999999999999876   3322  12226899999999999999


Q ss_pred             EEEE-ecCCeEEEEEcc---CCceEEEecc------------cCCCeEEEE--EecCCCEEEEecCCCeEEEeecCccce
Q psy10867         92 YIAV-SIETKLHMWQIS---SGRLLATASS------------HYQPITIVK--WSADSNFIVTGGEDGTICVWQLSRLIC  153 (343)
Q Consensus        92 ~l~~-~~d~~i~v~~~~---~~~~~~~~~~------------~~~~v~~~~--~~~~~~~l~s~~~dg~i~iwd~~~~~~  153 (343)
                      +|++ +.|+.|++||+.   +++....+..            +...+.++.  +++++++|++++.||.|++||+++++.
T Consensus       125 ~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~  204 (437)
T 3gre_A          125 AFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLER  204 (437)
T ss_dssp             EEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCE
T ss_pred             EEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCee
Confidence            8887 689999999994   5555443332            455677777  557899999999999999999998653


Q ss_pred             eeeeecCCCCCCCCccccccceeeeecc--cccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee--cCCcE
Q psy10867        154 KQTVAFGIPGSSGKGVTGLTEPLHVKSQ--HSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI--LDTRL  229 (343)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~--~~~~i  229 (343)
                                            +..+..  |...|++++|+|++  .+|++++.||.|++||+++++.+..+.  +..+|
T Consensus       205 ----------------------~~~~~~~~h~~~v~~~~~s~~~--~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v  260 (437)
T 3gre_A          205 ----------------------LQIIENSPRHGAVSSICIDEEC--CVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPI  260 (437)
T ss_dssp             ----------------------EEEEECCGGGCCEEEEEECTTS--CEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEE
T ss_pred             ----------------------eEEEccCCCCCceEEEEECCCC--CEEEEEcCCCeEEEEEcCCccEEEEEecCCCCce
Confidence                                  344445  88999999999998  899999999999999999999988774  56789


Q ss_pred             EEEEEcC----CCCEEEEEcCCCcEEEEEeecccccccccccCCCC-------------CCcccc--ccCcEEEEEEccC
Q psy10867        230 TCVAFDG----TEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTS-------------NPDFIG--HEKQVTSLSCSIT  290 (343)
Q Consensus       230 ~~~~~~~----~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~-------------~~~~~~--~~~~v~~~~~s~~  290 (343)
                      .+++|+|    ++.+|++++.|+.|++||+++......+.......             ...+.+  |...|++++|+ +
T Consensus       261 ~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~  339 (437)
T 3gre_A          261 THVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-N  339 (437)
T ss_dssp             EEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-T
T ss_pred             EEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-C
Confidence            9996654    67799999999999999998765433222111000             001233  88899999999 7


Q ss_pred             CCEEEEEeCCCcEEEEecccceeeeecc--------------------------------------cCCceEEEEEccC-
Q psy10867        291 GITLLSSSADETLKIWHTISRQCLRTIQ--------------------------------------HKGPVLGAFLGLL-  331 (343)
Q Consensus       291 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~--------------------------------------~~~~v~~~~~sp~-  331 (343)
                      +++|++++.|+.|++||+.+++.+..+.                                      |.+.|++++|+++ 
T Consensus       340 ~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~  419 (437)
T 3gre_A          340 DKILLTDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVD  419 (437)
T ss_dssp             TEEEEEEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESS
T ss_pred             ceEEEecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccC
Confidence            8999999999999999999887766554                                      6788999999998 


Q ss_pred             -CCeeeecccC
Q psy10867        332 -PPAIHDYDFT  341 (343)
Q Consensus       332 -~~~l~~~~~~  341 (343)
                       +.+|++++..
T Consensus       420 ~~~~l~s~~~d  430 (437)
T 3gre_A          420 ETPLLVACDNS  430 (437)
T ss_dssp             SSEEEEEEETT
T ss_pred             CceEEEEEcCC
Confidence             7788888753

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=100.00  E-value=7.5e-43  Score=291.49  Aligned_cols=250  Identities=7%  Similarity=0.007  Sum_probs=203.4

Q ss_pred             EEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCc--ccceecccCCcceEEEEECCCCCEEEE-ecCCeEEEEEc
Q psy10867         30 SYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQ--EKAQLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQI  106 (343)
Q Consensus        30 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~--~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~  106 (343)
                      .++.+.. +|.+++|+|++.++++++.|+.|++||+.++  +....+..|...|.+++|+|++++|++ +.|+.|++||+
T Consensus         6 ~~~~~~~-~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~   84 (377)
T 3dwl_C            6 VLHILPK-PSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEK   84 (377)
T ss_dssp             EEEECSS-CCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC--
T ss_pred             eEecCCC-cEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEc
Confidence            3444566 8999999999999999988899999999987  667778899999999999999998887 67999999999


Q ss_pred             cCCc---eEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecc-c
Q psy10867        107 SSGR---LLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQ-H  182 (343)
Q Consensus       107 ~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  182 (343)
                      .+++   ....+.+|...|.+++|+|++++|++++.|+.|++||+++.....                   ....+.. |
T Consensus        85 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~-------------------~~~~~~~~h  145 (377)
T 3dwl_C           85 RPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWW-------------------VSKHLKRPL  145 (377)
T ss_dssp             ----CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CC-------------------CCEEECSSC
T ss_pred             CCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccce-------------------eeeEeeccc
Confidence            9887   677788899999999999999999999999999999998864211                   2344555 9


Q ss_pred             ccceEEEEeecCCCceEEEEeeCCCeEEEEecC------------------CCceEEEeecCCcEEEEEEcCCCCEEEEE
Q psy10867        183 SLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLC------------------TGEDLLSLILDTRLTCVAFDGTEDNIYMG  244 (343)
Q Consensus       183 ~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~------------------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~  244 (343)
                      ...|.+++|+|++  .+|++++.|+.|++||++                  .++.+..+.|...|.+++|+|++++|+++
T Consensus       146 ~~~v~~~~~~~~~--~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~  223 (377)
T 3dwl_C          146 RSTILSLDWHPNN--VLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYA  223 (377)
T ss_dssp             CSCEEEEEECTTS--SEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEE
T ss_pred             CCCeEEEEEcCCC--CEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEE
Confidence            9999999999998  899999999999999985                  34455555677889999999999999999


Q ss_pred             cCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecc
Q psy10867        245 TSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTI  309 (343)
Q Consensus       245 ~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~  309 (343)
                      +.|+.|++||+.........       +..+.+|...|.+++|+|++++|++++.++.+ +|+..
T Consensus       224 ~~d~~i~iwd~~~~~~~~~~-------~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~  280 (377)
T 3dwl_C          224 GHDSSVTIAYPSAPEQPPRA-------LITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGN  280 (377)
T ss_dssp             ETTTEEC-CEECSTTSCEEE-------CCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECCC
T ss_pred             eCCCcEEEEECCCCCCccee-------eEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeC
Confidence            99999999999876542111       45678899999999999999999999876655 66654

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=100.00  E-value=1.6e-41  Score=279.76  Aligned_cols=285  Identities=10%  Similarity=0.039  Sum_probs=230.2

Q ss_pred             EEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcc---cceecccCCcceEEEEECCCCC-EEEE-ecCCeEEE
Q psy10867         29 MSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQE---KAQLRLICPGRISSMQASPDAA-YIAV-SIETKLHM  103 (343)
Q Consensus        29 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~---~~~~~~~~~~~v~~~~~s~~~~-~l~~-~~d~~i~v  103 (343)
                      ....+|.. .|.+++|+|++.++++++.|+.|++|++.+++   .......|...|.+++|+|+++ +|++ +.|+.|++
T Consensus         5 ~~~~~h~~-~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~   83 (342)
T 1yfq_A            5 QIEQAPKD-YISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILK   83 (342)
T ss_dssp             ECSSCCSS-CEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEE
T ss_pred             ecccCCCC-cEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEE
Confidence            33457888 99999999999999998888999999998776   2344458999999999999999 7776 67999999


Q ss_pred             EEc-cCCceEEEecc--cCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeec
Q psy10867        104 WQI-SSGRLLATASS--HYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKS  180 (343)
Q Consensus       104 ~~~-~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (343)
                      ||+ .+++. ..+.+  |...|.+++|+| +++|++++.|+.|++||+++........             ..+++..+.
T Consensus        84 wd~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~-------------~~~~~~~~~  148 (342)
T 1yfq_A           84 VDLIGSPSF-QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAV-------------KNLNSNNTK  148 (342)
T ss_dssp             ECSSSSSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEE-------------EESCSSSSS
T ss_pred             EEeccCCce-EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccc-------------cCCeeeEEe
Confidence            999 77765 67788  999999999999 9999999999999999998610000000             001222233


Q ss_pred             ccccceEEEEeecCCCceEEEEeeCCCeEEEEecCC-CceE---EEeecCCcEEEEEEcC-CCCEEEEEcCCCcEEEEEe
Q psy10867        181 QHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCT-GEDL---LSLILDTRLTCVAFDG-TEDNIYMGTSEGVIKSFCL  255 (343)
Q Consensus       181 ~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~-~~~~---~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~i~i~d~  255 (343)
                       |...|.+++|+|++    +++++.|+.|++||+++ +...   ....+...+.+++|+| +++++++++.||.|++|++
T Consensus       149 -~~~~v~~~~~~~~~----l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~  223 (342)
T 1yfq_A          149 -VKNKIFTMDTNSSR----LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFF  223 (342)
T ss_dssp             -SCCCEEEEEECSSE----EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEEC
T ss_pred             -eCCceEEEEecCCc----EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEE
Confidence             78899999999863    99999999999999998 5532   2233677899999999 9999999999999999999


Q ss_pred             ecccccccccccCCCCCCcccccc---------CcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc-c-CCceE
Q psy10867        256 RQVPRTRDHHIQDSTSNPDFIGHE---------KQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-H-KGPVL  324 (343)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~---------~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~-~~~v~  324 (343)
                      +......     .......+..|.         ..|++++|+|++++|++++.||.|++||+.+++.+..+. | ..+|.
T Consensus       224 ~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~  298 (342)
T 1yfq_A          224 DDQGDDY-----NSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVV  298 (342)
T ss_dssp             CTTCCST-----TCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEE
T ss_pred             cCCCccc-----ccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcccCCCce
Confidence            8751000     001133455554         499999999999999999999999999999999999998 6 99999


Q ss_pred             EEEEccCCCeeeecccC
Q psy10867        325 GAFLGLLPPAIHDYDFT  341 (343)
Q Consensus       325 ~~~~sp~~~~l~~~~~~  341 (343)
                      +++  |++++|++++..
T Consensus       299 ~~~--~~~~~l~s~s~D  313 (342)
T 1yfq_A          299 KIA--CSDNILCLATSD  313 (342)
T ss_dssp             EEE--ECSSEEEEEEEC
T ss_pred             Eec--CCCCeEEEEecC
Confidence            999  999999998753

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=100.00  E-value=2.3e-41  Score=283.12  Aligned_cols=266  Identities=13%  Similarity=0.108  Sum_probs=215.8

Q ss_pred             EEEecCCCCeEEEEecCCceEEEEEe--cCCCCcceEEEEeC-CceEEEEEcCCCeEEEEeCCCcccceecc---cCCcc
Q psy10867          7 VAFSYDGSGAISVWEPKGGTLLMSYK--GASVLSPHSMCLLG-NDYVLGVEKGKPMIQAWPVNSQEKAQLRL---ICPGR   80 (343)
Q Consensus         7 ~~~s~~~dg~i~iwd~~~~~~~~~~~--~~~~~~v~~~~~~~-~~~~~~~~~~~~~i~iw~~~~~~~~~~~~---~~~~~   80 (343)
                      ++++++.||.|++||+.+++....+.  +|.. .|.+++|+| ++.++++++.|+.|++||+.+.. ...+.   .+...
T Consensus        88 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~-~~~~~~~~~~~~~  165 (383)
T 3ei3_B           88 TVAVGSKGGDIILWDYDVQNKTSFIQGMGPGD-AITGMKFNQFNTNQLFVSSIRGATTLRDFSGSV-IQVFAKTDSWDYW  165 (383)
T ss_dssp             EEEEEEBTSCEEEEETTSTTCEEEECCCSTTC-BEEEEEEETTEEEEEEEEETTTEEEEEETTSCE-EEEEECCCCSSCC
T ss_pred             EEEEEcCCCeEEEEeCCCcccceeeecCCcCC-ceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCc-eEEEeccCCCCCC
Confidence            34444448999999999888877776  5888 999999999 67899999888999999999644 33333   34578


Q ss_pred             eEEEEECCCCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCC-EEEEecCCCeEEEeecCccceeeeee
Q psy10867         81 ISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSN-FIVTGGEDGTICVWQLSRLICKQTVA  158 (343)
Q Consensus        81 v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~  158 (343)
                      |.+++|+|++++|++ +.|+.|++||+ +++.+..+.+|...|.+++|+|+++ +|++++.|+.|++||+++.....   
T Consensus       166 v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~---  241 (383)
T 3ei3_B          166 YCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKN---  241 (383)
T ss_dssp             EEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTT---
T ss_pred             eEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCccc---
Confidence            999999999999997 68899999999 5788889999999999999999999 99999999999999998743211   


Q ss_pred             cCCCCCCCCccccccceeeeecccccceEEEEeec-CCCceEEEEeeCCCeEEEEecCCCceEEEee-c-----------
Q psy10867        159 FGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSK-LGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-L-----------  225 (343)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~-----------  225 (343)
                                     ..+..+ +|...|.+++|+| ++  .+|++++.|+.|++||+++++....+. +           
T Consensus       242 ---------------~~~~~~-~~~~~v~~~~~s~~~~--~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  303 (383)
T 3ei3_B          242 ---------------SYIAEM-PHEKPVNAAYFNPTDS--TKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPI  303 (383)
T ss_dssp             ---------------CEEEEE-ECSSCEEEEEECTTTS--CEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCC
T ss_pred             ---------------ceEEEe-cCCCceEEEEEcCCCC--CEEEEEcCCCcEEEEECCCCccccccccccccccccccce
Confidence                           123333 6899999999999 88  899999999999999999887755544 1           


Q ss_pred             ------CCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCcccc--ccCcEEEEEEccCCCEEEEE
Q psy10867        226 ------DTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIG--HEKQVTSLSCSITGITLLSS  297 (343)
Q Consensus       226 ------~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~s~  297 (343)
                            ...+..++|+|++++  +++.|+.|++||+.+...           +..+.+  |...+..++|+|++++|+++
T Consensus       304 ~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~-----------~~~l~~~~~~~~~~~~~~s~~g~~l~s~  370 (383)
T 3ei3_B          304 KATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGL-----------VHQLRDPNAAGIISLNKFSPTGDVLASG  370 (383)
T ss_dssp             CCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCE-----------EEEECBTTBCSCCCEEEECTTSSEEEEE
T ss_pred             EEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCce-----------eeeecCCCCCceEEEEEEecCccEEEEe
Confidence                  133445666777766  777899999999987554           333444  56778888999999999999


Q ss_pred             eCCCcEEEEeccc
Q psy10867        298 SADETLKIWHTIS  310 (343)
Q Consensus       298 ~~dg~i~iwd~~~  310 (343)
                      + |+.|++||+++
T Consensus       371 s-d~~i~iw~~~~  382 (383)
T 3ei3_B          371 M-GFNILIWNRED  382 (383)
T ss_dssp             E-TTEEEEEECC-
T ss_pred             c-CCcEEEEecCC
Confidence            7 99999999864

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.1e-41  Score=309.60  Aligned_cols=331  Identities=10%  Similarity=0.061  Sum_probs=235.2

Q ss_pred             eEEEecCCCCeEEEEecCCceEE-----------EEEecCCCCcceEEEEeCC-ceEEEEEcCCCeEEEEeCCCccccee
Q psy10867          6 EVAFSYDGSGAISVWEPKGGTLL-----------MSYKGASVLSPHSMCLLGN-DYVLGVEKGKPMIQAWPVNSQEKAQL   73 (343)
Q Consensus         6 ~~~~s~~~dg~i~iwd~~~~~~~-----------~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~i~iw~~~~~~~~~~   73 (343)
                      ..+++++.||.|++||+.+++..           ..+.+|.. .|.+++|+|+ +.++++++.||.| +||+.+++.+..
T Consensus       111 ~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~-~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~  188 (902)
T 2oaj_A          111 DWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLS-PIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQS  188 (902)
T ss_dssp             SEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCC-CCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEE
T ss_pred             CEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCC-CeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEE
Confidence            44555666899999999988764           23466888 9999999996 4788888888999 999999887765


Q ss_pred             cccC------------------CcceEEEEECCCCCEEEE-ecCCeEEEEEccCCceEEE--ec---c------------
Q psy10867         74 RLIC------------------PGRISSMQASPDAAYIAV-SIETKLHMWQISSGRLLAT--AS---S------------  117 (343)
Q Consensus        74 ~~~~------------------~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~--~~---~------------  117 (343)
                      +..|                  ...|.+++|+|+|++|++ +.|+.|++||+++++++..  +.   .            
T Consensus       189 ~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~  268 (902)
T 2oaj_A          189 FIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSS  268 (902)
T ss_dssp             ECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCS
T ss_pred             EecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCc
Confidence            5444                  577999999999999997 6899999999999987653  21   1            


Q ss_pred             -cCCCeEEEEEec----CC-CEEEEecCC-----CeEEEeecCc------------------cceeeeeecC--------
Q psy10867        118 -HYQPITIVKWSA----DS-NFIVTGGED-----GTICVWQLSR------------------LICKQTVAFG--------  160 (343)
Q Consensus       118 -~~~~v~~~~~~~----~~-~~l~s~~~d-----g~i~iwd~~~------------------~~~~~~~~~~--------  160 (343)
                       |...|.+++|++    ++ ..+++|+.|     ..+.+|++..                  ......+...        
T Consensus       269 ~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~  348 (902)
T 2oaj_A          269 TNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNI  348 (902)
T ss_dssp             SCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEE
T ss_pred             cccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEE
Confidence             345799999964    33 467777665     3788888421                  0111111100        


Q ss_pred             ---C---C---CCC----------CCcc--c--ccc-----------------------------------------cee
Q psy10867        161 ---I---P---GSS----------GKGV--T--GLT-----------------------------------------EPL  176 (343)
Q Consensus       161 ---~---~---~~~----------~~~~--~--~~~-----------------------------------------~~~  176 (343)
                         .   +   +..          ...+  .  ...                                         ...
T Consensus       349 ~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~  428 (902)
T 2oaj_A          349 LPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKD  428 (902)
T ss_dssp             EECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCC
T ss_pred             EECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCC
Confidence               0   0   000          0000  0  000                                         000


Q ss_pred             eeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceE----EEe--------ecCCcEEEEEEcCCCCEEEEE
Q psy10867        177 HVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDL----LSL--------ILDTRLTCVAFDGTEDNIYMG  244 (343)
Q Consensus       177 ~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~----~~~--------~~~~~i~~~~~~~~~~~l~~~  244 (343)
                      ..+.+|...+..++|+|++  ++|++|+.|++|++||+.+++..    ...        .|...|.+++|+|++++|++|
T Consensus       429 ~~l~G~~~~v~sv~~spdg--~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsg  506 (902)
T 2oaj_A          429 YLLKGGVRTKRQKLPAEYG--TAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVS  506 (902)
T ss_dssp             CSCCCSBCCCCCCCCCSEE--EEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEE
T ss_pred             CcccCCcCCCCcccccccC--cEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEE
Confidence            1233445555566677887  89999999999999999887531    111        356789999999999999999


Q ss_pred             cCCCcEEEEEeecccccc--------c--cc-----ccC-------------------CCCCCccccccCcEEEEEEccC
Q psy10867        245 TSEGVIKSFCLRQVPRTR--------D--HH-----IQD-------------------STSNPDFIGHEKQVTSLSCSIT  290 (343)
Q Consensus       245 ~~d~~i~i~d~~~~~~~~--------~--~~-----~~~-------------------~~~~~~~~~~~~~v~~~~~s~~  290 (343)
                      +.||+|++||+.......        .  ..     +..                   ..++..+.+|.+.|++++||||
T Consensus       507 s~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpd  586 (902)
T 2oaj_A          507 IETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNI  586 (902)
T ss_dssp             ETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBT
T ss_pred             ecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCC
Confidence            999999999998753100        0  00     000                   0124567789999999999999


Q ss_pred             CCEEEEEeCCCcEEEEecccceeee-----ec--ccCCceEEEEEc-----cCC---CeeeecccC
Q psy10867        291 GITLLSSSADETLKIWHTISRQCLR-----TI--QHKGPVLGAFLG-----LLP---PAIHDYDFT  341 (343)
Q Consensus       291 ~~~l~s~~~dg~i~iwd~~~~~~~~-----~~--~~~~~v~~~~~s-----p~~---~~l~~~~~~  341 (343)
                      | +||+|+.|++|++||++++..+.     .+  .|.+.|++++|+     |||   ++|++++..
T Consensus       587 G-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D  651 (902)
T 2oaj_A          587 G-FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDM  651 (902)
T ss_dssp             S-EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETT
T ss_pred             c-EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecC
Confidence            9 99999999999999998877653     23  377889999999     886   899988753

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=4.7e-41  Score=280.69  Aligned_cols=257  Identities=14%  Similarity=0.180  Sum_probs=217.2

Q ss_pred             ceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCC--CcccceecccCCcceEEEEECCC--CCEEEE-ecCC
Q psy10867         25 GTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVN--SQEKAQLRLICPGRISSMQASPD--AAYIAV-SIET   99 (343)
Q Consensus        25 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~--~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~-~~d~   99 (343)
                      |+++..+.+|.. .|.+++|+|++.++++++.||.|++|++.  +.+....+..|...|.+++|+|+  +++|++ +.|+
T Consensus         1 G~~~~~~~~h~~-~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg   79 (379)
T 3jrp_A            1 GSMVVIANAHNE-LIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDG   79 (379)
T ss_dssp             ----CCEEECCC-CEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTS
T ss_pred             CCccEEecCCcc-cEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCC
Confidence            456778999999 99999999999999999988999999998  55666777789999999999987  888887 6899


Q ss_pred             eEEEEEccCCc--eEEEecccCCCeEEEEEecC--CCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccce
Q psy10867        100 KLHMWQISSGR--LLATASSHYQPITIVKWSAD--SNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEP  175 (343)
Q Consensus       100 ~i~v~~~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (343)
                      .|++||+.+++  .+..+..|...|.+++|+|+  +++|++++.||.|++||++.....                    .
T Consensus        80 ~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~--------------------~  139 (379)
T 3jrp_A           80 KVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTT--------------------S  139 (379)
T ss_dssp             CEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCC--------------------C
T ss_pred             EEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCce--------------------e
Confidence            99999999987  67788889999999999999  999999999999999999876322                    3


Q ss_pred             eeeecccccceEEEEeec-------------CCCceEEEEeeCCCeEEEEecCCCceE----EEee-cCCcEEEEEEcCC
Q psy10867        176 LHVKSQHSLPVTHVTLSK-------------LGAKSRVASVSHDRTCKIFDLCTGEDL----LSLI-LDTRLTCVAFDGT  237 (343)
Q Consensus       176 ~~~~~~~~~~v~~~~~~~-------------~~~~~~l~~~~~d~~i~~wd~~~~~~~----~~~~-~~~~i~~~~~~~~  237 (343)
                      ...+..|...|.+++|+|             ++  .++++++.|+.|++||+++++..    ..+. |...|.+++|+|+
T Consensus       140 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~--~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~  217 (379)
T 3jrp_A          140 PIIIDAHAIGVNSASWAPATIEEDGEHNGTKES--RKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPT  217 (379)
T ss_dssp             EEEEECCTTCEEEEEECCCC----------CTT--CEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCC
T ss_pred             eEEecCCCCceEEEEEcCccccccccccCCCCC--CEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCC
Confidence            345567999999999999             46  79999999999999999877643    3333 6788999999999


Q ss_pred             ---CCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEeccc
Q psy10867        238 ---EDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTIS  310 (343)
Q Consensus       238 ---~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~  310 (343)
                         +++|++++.||.|++||++.........      ......|...|++++|+|++++|++++.||.|++|++..
T Consensus       218 ~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~------~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~  287 (379)
T 3jrp_A          218 VLLRSYLASVSQDRTCIIWTQDNEQGPWKKT------LLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL  287 (379)
T ss_dssp             CSSSEEEEEEETTSCEEEEEESSTTSCCEEE------ESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEE
T ss_pred             CCCCCeEEEEeCCCEEEEEeCCCCCccceee------eeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCC
Confidence               8999999999999999998754221111      223345888999999999999999999999999999874

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=100.00  E-value=2.3e-41  Score=280.35  Aligned_cols=270  Identities=10%  Similarity=0.078  Sum_probs=208.7

Q ss_pred             ccceEEEecCCC---------------CeEEEEecCCceE----------EEEEecCCCCcceEEEEeCCceEEEEE---
Q psy10867          3 LLNEVAFSYDGS---------------GAISVWEPKGGTL----------LMSYKGASVLSPHSMCLLGNDYVLGVE---   54 (343)
Q Consensus         3 ~v~~~~~s~~~d---------------g~i~iwd~~~~~~----------~~~~~~~~~~~v~~~~~~~~~~~~~~~---   54 (343)
                      ||.++.|++++.               +.|++|++..+..          ...+..|.. .|.+++++++  .++++   
T Consensus        16 PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~-~v~s~~~~~~--~~~~g~~~   92 (365)
T 4h5i_A           16 PAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDD-SPTAIDASKG--IILVGCNE   92 (365)
T ss_dssp             CEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSC-CCCEEEEETT--EEEEECCC
T ss_pred             CEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCC-ceEEEEeCCC--EEEEEECC
Confidence            788888888761               2599999865321          234667877 8888887654  33333   


Q ss_pred             --------cCCCeEEEEeCCCcccc-e--------ecccCCcceEEEEECCCCCEEEE---ecCCeEEEEEccCCceEEE
Q psy10867         55 --------KGKPMIQAWPVNSQEKA-Q--------LRLICPGRISSMQASPDAAYIAV---SIETKLHMWQISSGRLLAT  114 (343)
Q Consensus        55 --------~~~~~i~iw~~~~~~~~-~--------~~~~~~~~v~~~~~s~~~~~l~~---~~d~~i~v~~~~~~~~~~~  114 (343)
                              ..|+.+++|++...... .        ....+...+.+++|+|||+++++   +.|++|+|||+++++++..
T Consensus        93 ~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~  172 (365)
T 4h5i_A           93 NSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFE  172 (365)
T ss_dssp             CHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEE
T ss_pred             CccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEE
Confidence                    34578999987654322 1        11134456899999999998864   2589999999999999888


Q ss_pred             ecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecC
Q psy10867        115 ASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKL  194 (343)
Q Consensus       115 ~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  194 (343)
                      +. |.+.|.+++|+|+++++++++.++ +++|+..++...                    .......|...|.+++|+|+
T Consensus       173 ~~-~~~~V~~v~fspdg~~l~s~s~~~-~~~~~~~~~~~~--------------------~~~~~~~~~~~v~~v~fspd  230 (365)
T 4h5i_A          173 IE-TRGEVKDLHFSTDGKVVAYITGSS-LEVISTVTGSCI--------------------ARKTDFDKNWSLSKINFIAD  230 (365)
T ss_dssp             EE-CSSCCCEEEECTTSSEEEEECSSC-EEEEETTTCCEE--------------------EEECCCCTTEEEEEEEEEET
T ss_pred             eC-CCCceEEEEEccCCceEEecccee-EEEEEeccCcce--------------------eeeecCCCCCCEEEEEEcCC
Confidence            85 778899999999999999998655 566666554322                    22334568889999999999


Q ss_pred             CCceEEEEeeCCC----eEEEEecCCCceE----EEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeeccccccccc
Q psy10867        195 GAKSRVASVSHDR----TCKIFDLCTGEDL----LSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHH  265 (343)
Q Consensus       195 ~~~~~l~~~~~d~----~i~~wd~~~~~~~----~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~  265 (343)
                      +  .++++++.|+    .+++|++......    ..+. +...|++++|+|+|++|++|+.|+.|+|||+++.+.     
T Consensus       231 g--~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~-----  303 (365)
T 4h5i_A          231 D--TVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSM-----  303 (365)
T ss_dssp             T--EEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEE-----
T ss_pred             C--CEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcE-----
Confidence            9  8999998887    6889998766542    2222 677899999999999999999999999999987544     


Q ss_pred             ccCCCCCCc-cccccCcEEEEEEccCCCEEEEEeCCCcEEEEeccc
Q psy10867        266 IQDSTSNPD-FIGHEKQVTSLSCSITGITLLSSSADETLKIWHTIS  310 (343)
Q Consensus       266 ~~~~~~~~~-~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~  310 (343)
                            +.. +.+|...|++++|+|||++||+||.|++|+|||+..
T Consensus       304 ------~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~  343 (365)
T 4h5i_A          304 ------SKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPL  343 (365)
T ss_dssp             ------EEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCT
T ss_pred             ------EEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence                  333 468999999999999999999999999999999864

>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1

Probab=100.00  E-value=4.5e-41  Score=285.78  Aligned_cols=286  Identities=19%  Similarity=0.284  Sum_probs=226.9

Q ss_pred             eEEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEE
Q psy10867          6 EVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQ   85 (343)
Q Consensus         6 ~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~   85 (343)
                      ..+++++.||.|++||+.+++.+..+.+|.. .|.+++|  ++.++++|+.||.|++||+.+++.+..+..|...|.+++
T Consensus       144 ~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~-~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~  220 (435)
T 1p22_A          144 QKIVSGLRDNTIKIWDKNTLECKRILTGHTG-SVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLR  220 (435)
T ss_dssp             SEEEEEESSSCEEEEESSSCCEEEEECCCSS-CEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEE
T ss_pred             CEEEEEeCCCeEEEEeCCCCeEEEEEcCCCC-cEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEE
Confidence            4567888899999999999999999999999 9999998  677888888889999999999998888889999999999


Q ss_pred             ECCCCCEEEE-ecCCeEEEEEccCCceE---EEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCC
Q psy10867         86 ASPDAAYIAV-SIETKLHMWQISSGRLL---ATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGI  161 (343)
Q Consensus        86 ~s~~~~~l~~-~~d~~i~v~~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~  161 (343)
                      |++  .++++ +.|+.|++||+.+++..   ..+.+|...|.+++|  +++++++|+.||.|++||++++.         
T Consensus       221 ~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~---------  287 (435)
T 1p22_A          221 FNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCE---------  287 (435)
T ss_dssp             CCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCC---------
T ss_pred             EcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCc---------
Confidence            974  35554 78999999999988654   677889999999999  78899999999999999999864         


Q ss_pred             CCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCCE
Q psy10867        162 PGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDN  240 (343)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~  240 (343)
                                   .+..+.+|...|.++.++  +  .++++++.||.|++||+++++.+..+. |...+.+++|  ++++
T Consensus       288 -------------~~~~~~~~~~~v~~~~~~--~--~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~  348 (435)
T 1p22_A          288 -------------FVRTLNGHKRGIACLQYR--D--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKR  348 (435)
T ss_dssp             -------------EEEEEECCSSCEEEEEEE--T--TEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC--CSSE
T ss_pred             -------------EEEEEcCCCCcEEEEEeC--C--CEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe--cCCE
Confidence                         455566899999999995  3  689999999999999999999998887 7788999998  7889


Q ss_pred             EEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecccC
Q psy10867        241 IYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQHK  320 (343)
Q Consensus       241 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~  320 (343)
                      |++|+.||.|++||+.........  ....++..+.+|...|++++|  ++++|++++.||.|++||+.+..........
T Consensus       349 l~sg~~dg~i~vwd~~~~~~~~~~--~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~  424 (435)
T 1p22_A          349 IVSGAYDGKIKVWDLVAALDPRAP--AGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLNDPAAQAEPPR  424 (435)
T ss_dssp             EEEEETTSCEEEEEHHHHTSTTSC--TTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC-------------
T ss_pred             EEEEeCCCcEEEEECCCCCCcccc--ccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEECCCCCCcccCCCC
Confidence            999999999999999875532211  011135567889999999999  7889999999999999999887766655555


Q ss_pred             CceEEEEEcc
Q psy10867        321 GPVLGAFLGL  330 (343)
Q Consensus       321 ~~v~~~~~sp  330 (343)
                      .+...+.|.+
T Consensus       425 ~~~~~~~~~~  434 (435)
T 1p22_A          425 SPSRTYTYIS  434 (435)
T ss_dssp             ----------
T ss_pred             CCccceeeec
Confidence            5666666654

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=100.00  E-value=6.2e-41  Score=282.70  Aligned_cols=297  Identities=10%  Similarity=0.052  Sum_probs=242.0

Q ss_pred             CCeEEEEecCCceEEEEEecCCCCcceEEEEeC-CceEEEEEcCCCeEEEEeCCCcccceecc-------------cCCc
Q psy10867         14 SGAISVWEPKGGTLLMSYKGASVLSPHSMCLLG-NDYVLGVEKGKPMIQAWPVNSQEKAQLRL-------------ICPG   79 (343)
Q Consensus        14 dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~i~iw~~~~~~~~~~~~-------------~~~~   79 (343)
                      ++.+++|++..++....+.+|.. .|.+++|+| ++.++++++.||.|++||+.+++......             .|..
T Consensus        22 ~~~~~v~~~~~~~~~~~~~~h~~-~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  100 (408)
T 4a11_B           22 ESTRRVLGLELNKDRDVERIHGG-GINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRY  100 (408)
T ss_dssp             HHHHHHHTEEECTTEEECCCCSS-CEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSS
T ss_pred             cCcceeeccccCcceeeeeccCC-cEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCC
Confidence            35678899988888899999999 999999999 99999999988999999999887664432             4899


Q ss_pred             ceEEEEECC-CCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecC---CCEEEEecCCCeEEEeecCcccee
Q psy10867         80 RISSMQASP-DAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSAD---SNFIVTGGEDGTICVWQLSRLICK  154 (343)
Q Consensus        80 ~v~~~~~s~-~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~s~~~dg~i~iwd~~~~~~~  154 (343)
                      .|.+++|+| ++.+|++ +.|+.|++||+.+++....+. +...+.++.|+|.   +.++++++.||.|++||++++.  
T Consensus       101 ~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~--  177 (408)
T 4a11_B          101 SVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGS--  177 (408)
T ss_dssp             CEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSC--
T ss_pred             cEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcc--
Confidence            999999999 6777776 679999999999998887776 6788999999984   4499999999999999998764  


Q ss_pred             eeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCc-eEEEe----------
Q psy10867        155 QTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGE-DLLSL----------  223 (343)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~-~~~~~----------  223 (343)
                                          ....+..|...|.+++|+|+++ .++++++.||.|++||+++++ ....+          
T Consensus       178 --------------------~~~~~~~~~~~v~~~~~~~~~~-~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~  236 (408)
T 4a11_B          178 --------------------CSHILQGHRQEILAVSWSPRYD-YILATASADSRVKLWDVRRASGCLITLDQHNGKKSQA  236 (408)
T ss_dssp             --------------------CCEEECCCCSCEEEEEECSSCT-TEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCC
T ss_pred             --------------------eeeeecCCCCcEEEEEECCCCC-cEEEEEcCCCcEEEEECCCCCccccccccccccccee
Confidence                                4455668999999999999983 369999999999999998775 33333          


Q ss_pred             ------ecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEE
Q psy10867        224 ------ILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSS  297 (343)
Q Consensus       224 ------~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~  297 (343)
                            .+...|.+++|+|++++|++++.||.|++||+.+.........      .........+........+..++++
T Consensus       237 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~  310 (408)
T 4a11_B          237 VESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYG------KVCNNSKKGLKFTVSCGCSSEFVFV  310 (408)
T ss_dssp             TTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCC------CCCCCCSSCCCCEECCSSSSCEEEE
T ss_pred             eccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccc------cccccccccceeEEecCCCceEEEE
Confidence                  3567899999999999999999999999999987654332210      0001111122222223345667777


Q ss_pred             eCCCcEEEEecccceeeeecc-cCCceEEEEEccCCCeeeecccC
Q psy10867        298 SADETLKIWHTISRQCLRTIQ-HKGPVLGAFLGLLPPAIHDYDFT  341 (343)
Q Consensus       298 ~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~~  341 (343)
                      +.|+.|++||+.+++.+..+. |.+.|++++|+|++++|++++..
T Consensus       311 ~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d  355 (408)
T 4a11_B          311 PYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRD  355 (408)
T ss_dssp             EETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEETT
T ss_pred             ecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEECCC
Confidence            889999999999999999998 99999999999999999998754

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=100.00  E-value=2.6e-40  Score=266.74  Aligned_cols=243  Identities=15%  Similarity=0.178  Sum_probs=199.5

Q ss_pred             eecccCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCC--ceEEEecccCCCeEEEEEec--CCCEEEEecCCCeEEEe
Q psy10867         72 QLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQISSG--RLLATASSHYQPITIVKWSA--DSNFIVTGGEDGTICVW  146 (343)
Q Consensus        72 ~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~--~~~~~~~~~~~~v~~~~~~~--~~~~l~s~~~dg~i~iw  146 (343)
                      ..+.+|.+.|.+++|+|+|++|++ +.|++|++||+.++  +.+..+.+|.++|.+++|+|  ++++|++|+.|++|++|
T Consensus         3 ~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iW   82 (297)
T 2pm7_B            3 VIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIW   82 (297)
T ss_dssp             EECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEE
T ss_pred             eeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEE
Confidence            345689999999999999999997 68999999999753  66788999999999999986  48999999999999999


Q ss_pred             ecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCce--EEEe-
Q psy10867        147 QLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGED--LLSL-  223 (343)
Q Consensus       147 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~--~~~~-  223 (343)
                      |++++..                    ..+..+..|...|.+++|+|+..+.+|++++.|+.|++||++++..  ...+ 
T Consensus        83 d~~~~~~--------------------~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~  142 (297)
T 2pm7_B           83 KEENGRW--------------------SQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIID  142 (297)
T ss_dssp             EBSSSCB--------------------CCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEE
T ss_pred             EcCCCce--------------------EEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeee
Confidence            9987531                    1344566799999999999972117999999999999999987642  2333 


Q ss_pred             ecCCcEEEEEEcCC-------------CCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccC
Q psy10867        224 ILDTRLTCVAFDGT-------------EDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSIT  290 (343)
Q Consensus       224 ~~~~~i~~~~~~~~-------------~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~  290 (343)
                      .|...+.+++|+|+             +++|++|+.|+.|++||++.......       ....+.+|...|.+++|+|+
T Consensus       143 ~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~-------~~~~l~~H~~~V~~v~~sp~  215 (297)
T 2pm7_B          143 AHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYV-------LESTLEGHSDWVRDVAWSPT  215 (297)
T ss_dssp             CCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEE-------EEEEECCCSSCEEEEEECCC
T ss_pred             cccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEE-------EEEEecCCCCceEEEEECCC
Confidence            37888999999997             57999999999999999986542211       13457789999999999998


Q ss_pred             C---CEEEEEeCCCcEEEEecccce---eeeec--c-cCCceEEEEEccCCCeeeecccC
Q psy10867        291 G---ITLLSSSADETLKIWHTISRQ---CLRTI--Q-HKGPVLGAFLGLLPPAIHDYDFT  341 (343)
Q Consensus       291 ~---~~l~s~~~dg~i~iwd~~~~~---~~~~~--~-~~~~v~~~~~sp~~~~l~~~~~~  341 (343)
                      +   ++|++++.|++|++||+.+..   ....+  . +...|.+++|+|++++|++++..
T Consensus       216 ~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D  275 (297)
T 2pm7_B          216 VLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGD  275 (297)
T ss_dssp             CSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETT
T ss_pred             CCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCC
Confidence            5   899999999999999997642   11223  2 77899999999999999998753

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=100.00  E-value=5.9e-42  Score=291.05  Aligned_cols=278  Identities=16%  Similarity=0.155  Sum_probs=214.8

Q ss_pred             ccceEEEec---------CCCCeEEEEecCCceE--EEEEecCCCCcceEEEEeC-CceEEEEEcCCCeEEEEeCCCccc
Q psy10867          3 LLNEVAFSY---------DGSGAISVWEPKGGTL--LMSYKGASVLSPHSMCLLG-NDYVLGVEKGKPMIQAWPVNSQEK   70 (343)
Q Consensus         3 ~v~~~~~s~---------~~dg~i~iwd~~~~~~--~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~i~iw~~~~~~~   70 (343)
                      .|++++|+|         +.||.|+|||+.+++.  ...+.+|.. .|++++|+| ++.+|++++.||+|++||++++..
T Consensus       121 ~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~-~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~  199 (435)
T 4e54_B          121 RATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGG-SITGLKFNPLNTNQFYASSMEGTTRLQDFKGNIL  199 (435)
T ss_dssp             CEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSC-CCCEEEECSSCTTEEEEECSSSCEEEEETTSCEE
T ss_pred             CEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCC-CEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCce
Confidence            356666655         4489999999987654  455678998 999999998 678888988889999999987654


Q ss_pred             ceecc--cCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCC-EEEEecCCCeEEEe
Q psy10867         71 AQLRL--ICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSN-FIVTGGEDGTICVW  146 (343)
Q Consensus        71 ~~~~~--~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~dg~i~iw  146 (343)
                      .....  .+...+.+++|+|++++|++ +.||.|++||++ ++.+..+.+|...|.+++|+|++. +|++|+.|+.|++|
T Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~-~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iw  278 (435)
T 4e54_B          200 RVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD-GKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIW  278 (435)
T ss_dssp             EEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESS-SCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEE
T ss_pred             eEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccC-cceeEEEecccceEEeeeecCCCceEEEEecCcceeeEE
Confidence            43332  33456789999999999997 678999999986 456678889999999999999876 78899999999999


Q ss_pred             ecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-c
Q psy10867        147 QLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-L  225 (343)
Q Consensus       147 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~  225 (343)
                      |+++.....                   ......+|...|++++|+|++  .+|++++.|+.|++||+++++....+. +
T Consensus       279 d~~~~~~~~-------------------~~~~~~~h~~~v~~~~~spdg--~~l~s~~~D~~i~iwd~~~~~~~~~~~~~  337 (435)
T 4e54_B          279 DLRQVRGKA-------------------SFLYSLPHRHPVNAACFSPDG--ARLLTTDQKSEIRVYSASQWDCPLGLIPH  337 (435)
T ss_dssp             ETTTCCSSS-------------------CCSBCCBCSSCEEECCBCTTS--SEEEEEESSSCEEEEESSSSSSEEEECCC
T ss_pred             ecccccccc-------------------eEEEeeeccccccceeECCCC--CeeEEEcCCCEEEEEECCCCccceEEecc
Confidence            998764332                   223345799999999999999  899999999999999999988776654 2


Q ss_pred             C------CcEEEEEEcCCCCEEEEEc------------CCCcEEEEEeecccccccccccCCCCCCccccccCcEEEE-E
Q psy10867        226 D------TRLTCVAFDGTEDNIYMGT------------SEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSL-S  286 (343)
Q Consensus       226 ~------~~i~~~~~~~~~~~l~~~~------------~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~  286 (343)
                      .      ..+....|+|++..++++.            .++.|++||..+......          ...+|...|.++ +
T Consensus       338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~----------l~~~~~~~v~s~~~  407 (435)
T 4e54_B          338 PHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQ----------LYDPESSGISSLNE  407 (435)
T ss_dssp             CCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEE----------ECCSSCCCCCCEEE
T ss_pred             cccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEE----------EeCCCCCcEEEEEE
Confidence            1      1234566777777776654            235799999887544321          134677888887 6


Q ss_pred             EccCCCEEEEEeCCCcEEEEecccceee
Q psy10867        287 CSITGITLLSSSADETLKIWHTISRQCL  314 (343)
Q Consensus       287 ~s~~~~~l~s~~~dg~i~iwd~~~~~~~  314 (343)
                      |+|+|++|++|+ |+.|+|||+++++..
T Consensus       408 fspdg~~lasg~-d~~i~iW~~~~gk~r  434 (435)
T 4e54_B          408 FNPMGDTLASAM-GYHILIWSQQEARTR  434 (435)
T ss_dssp             ECTTSSCEEEEC-SSEEEECCCC-----
T ss_pred             ECCCCCEEEEEc-CCcEEEEECCcCeee
Confidence            999999999876 789999999988753

>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*

Probab=100.00  E-value=3.5e-40  Score=282.86  Aligned_cols=294  Identities=17%  Similarity=0.148  Sum_probs=241.5

Q ss_pred             eEEEEEecCCCCc-ceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEEecCCeEEEE
Q psy10867         26 TLLMSYKGASVLS-PHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIETKLHMW  104 (343)
Q Consensus        26 ~~~~~~~~~~~~~-v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~d~~i~v~  104 (343)
                      .....+.+|.. . +.++.++  +.++++++.||.|++||+.+++.+..+.+|.+.|.+++|+|++.+++++.|+.|++|
T Consensus       112 ~~~~~l~~h~~-~v~~~~~~~--~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~~l~s~s~dg~i~vw  188 (464)
T 3v7d_B          112 PQRTTLRGHMT-SVITCLQFE--DNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGILVSGSTDRTVRVW  188 (464)
T ss_dssp             CEEEEEECCSS-SCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTTEEEEEETTSCEEEE
T ss_pred             cceEEEcCCCC-CcEEEEEEC--CCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCCEEEEEeCCCCEEEE
Confidence            45678899987 5 4666664  568888888899999999999998888899999999999998844445889999999


Q ss_pred             EccCCceEEEecccCCCeEEEEEec--CCCEEEEecCCCeEEEeecCccceeeeeecCCCCC-CCCccccccceeeeecc
Q psy10867        105 QISSGRLLATASSHYQPITIVKWSA--DSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGS-SGKGVTGLTEPLHVKSQ  181 (343)
Q Consensus       105 ~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  181 (343)
                      |+++++.+..+.+|.+.|.+++|++  +++++++++.||.|++||+++.............. ..............+.+
T Consensus       189 d~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (464)
T 3v7d_B          189 DIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRG  268 (464)
T ss_dssp             ETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECC
T ss_pred             ECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccC
Confidence            9999999999999999999999984  77899999999999999998865433221100000 00000111123567788


Q ss_pred             cccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccc
Q psy10867        182 HSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPR  260 (343)
Q Consensus       182 ~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~  260 (343)
                      |...+.++  ++++  .++++++.|+.|++||+++++.+..+. +...+.+++|+|+++++++|+.||.|++||+++...
T Consensus       269 ~~~~v~~~--~~~~--~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~  344 (464)
T 3v7d_B          269 HMASVRTV--SGHG--NIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGEL  344 (464)
T ss_dssp             CSSCEEEE--EEET--TEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEE
T ss_pred             ccceEEEE--cCCC--CEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcE
Confidence            98888887  5666  799999999999999999999988887 788899999999999999999999999999987543


Q ss_pred             cccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecccCCceEEEEEccCCCeeeecc
Q psy10867        261 TRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQHKGPVLGAFLGLLPPAIHDYD  339 (343)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~  339 (343)
                                 +..+.+|...|.+++|+  +++|++++.||.|++||+.+++....+.+...+..++|+|++++|++++
T Consensus       345 -----------~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  410 (464)
T 3v7d_B          345 -----------MYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGS  410 (464)
T ss_dssp             -----------EEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEECTTCCCEEEEEECSSEEEEEE
T ss_pred             -----------EEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeeeecCCCCccEEEEEeCCCEEEEec
Confidence                       45677899999999997  5799999999999999999988877777888899999999999999886

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=100.00  E-value=3e-41  Score=279.63  Aligned_cols=270  Identities=13%  Similarity=0.096  Sum_probs=209.1

Q ss_pred             CcceEEEEeCCceEEEEEcCC-------CeEEEEeCCCcccc----------eecccCCcceEEEEECCCCCEEEEe---
Q psy10867         37 LSPHSMCLLGNDYVLGVEKGK-------PMIQAWPVNSQEKA----------QLRLICPGRISSMQASPDAAYIAVS---   96 (343)
Q Consensus        37 ~~v~~~~~~~~~~~~~~~~~~-------~~i~iw~~~~~~~~----------~~~~~~~~~v~~~~~s~~~~~l~~~---   96 (343)
                      ++|++++|+||+++|++|+.+       +.|++|++......          ..+..|...|.+++++  +..++++   
T Consensus        15 ~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~--~~~~~~g~~~   92 (365)
T 4h5i_A           15 YPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDAS--KGIILVGCNE   92 (365)
T ss_dssp             SCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEE--TTEEEEECCC
T ss_pred             CCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeC--CCEEEEEECC
Confidence            489999999999999998653       25999998765432          1244677788888765  4455542   


Q ss_pred             ---------cCCeEEEEEccCCceEE----Ee-----cccCCCeEEEEEecCCCEEEE--ecCCCeEEEeecCccceeee
Q psy10867         97 ---------IETKLHMWQISSGRLLA----TA-----SSHYQPITIVKWSADSNFIVT--GGEDGTICVWQLSRLICKQT  156 (343)
Q Consensus        97 ---------~d~~i~v~~~~~~~~~~----~~-----~~~~~~v~~~~~~~~~~~l~s--~~~dg~i~iwd~~~~~~~~~  156 (343)
                               .|+.+++|++.+.....    ..     ..+...+.+++|+|||+++++  ++.|+.|++||+.++.....
T Consensus        93 ~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~  172 (365)
T 4h5i_A           93 NSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFE  172 (365)
T ss_dssp             CHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEE
T ss_pred             CccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEE
Confidence                     36789999987653221    11     124456899999999998764  55789999999998754332


Q ss_pred             eecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee---cCCcEEEEE
Q psy10867        157 VAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI---LDTRLTCVA  233 (343)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~---~~~~i~~~~  233 (343)
                                            + .|...|.+++|+|++  +++++++.+ .+++|+..+++.+....   +...+.+++
T Consensus       173 ----------------------~-~~~~~V~~v~fspdg--~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~v~  226 (365)
T 4h5i_A          173 ----------------------I-ETRGEVKDLHFSTDG--KVVAYITGS-SLEVISTVTGSCIARKTDFDKNWSLSKIN  226 (365)
T ss_dssp             ----------------------E-ECSSCCCEEEECTTS--SEEEEECSS-CEEEEETTTCCEEEEECCCCTTEEEEEEE
T ss_pred             ----------------------e-CCCCceEEEEEccCC--ceEEeccce-eEEEEEeccCcceeeeecCCCCCCEEEEE
Confidence                                  2 377889999999999  789888855 56666667776654432   566799999


Q ss_pred             EcCCCCEEEEEcCCC----cEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecc
Q psy10867        234 FDGTEDNIYMGTSEG----VIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTI  309 (343)
Q Consensus       234 ~~~~~~~l~~~~~d~----~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~  309 (343)
                      |+|+++++++++.++    .+++|++.........       ...+.+|...|++++|+|||++||+|+.|++|+|||++
T Consensus       227 fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~-------~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~  299 (365)
T 4h5i_A          227 FIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLR-------SKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLK  299 (365)
T ss_dssp             EEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEE-------EEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETT
T ss_pred             EcCCCCEEEEEecCCcceeEEeecccccceeccee-------eeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECC
Confidence            999999999998877    6888888764322111       33567889999999999999999999999999999999


Q ss_pred             cceeeeec-c-cCCceEEEEEccCCCeeeecccC
Q psy10867        310 SRQCLRTI-Q-HKGPVLGAFLGLLPPAIHDYDFT  341 (343)
Q Consensus       310 ~~~~~~~~-~-~~~~v~~~~~sp~~~~l~~~~~~  341 (343)
                      +++++.++ . |..+|++++|+|||++|++++..
T Consensus       300 ~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D  333 (365)
T 4h5i_A          300 DLSMSKIFKQAHSFAITEVTISPDSTYVASVSAA  333 (365)
T ss_dssp             TTEEEEEETTSSSSCEEEEEECTTSCEEEEEETT
T ss_pred             CCcEEEEecCcccCCEEEEEECCCCCEEEEEeCC
Confidence            99999885 5 99999999999999999999864

>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=100.00  E-value=9.9e-42  Score=292.95  Aligned_cols=246  Identities=17%  Similarity=0.153  Sum_probs=195.6

Q ss_pred             EEEEecCCCCcceEEEEeCCc---------eEEEEE-------------------cCCCeEEEEeCCCcccc----eecc
Q psy10867         28 LMSYKGASVLSPHSMCLLGND---------YVLGVE-------------------KGKPMIQAWPVNSQEKA----QLRL   75 (343)
Q Consensus        28 ~~~~~~~~~~~v~~~~~~~~~---------~~~~~~-------------------~~~~~i~iw~~~~~~~~----~~~~   75 (343)
                      ...+. +.+ .|.+++|+|++         .++|++                   +.|++|+||++.+++..    ..+.
T Consensus       127 ~~~~~-~~~-~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~  204 (524)
T 2j04_B          127 GFIYN-VGG-LVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIV  204 (524)
T ss_dssp             EEEEE-CCC---CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEE
T ss_pred             eEEEE-CCC-ceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEE
Confidence            33444 345 88888888875         566653                   46689999999877643    2344


Q ss_pred             cCCcceEEEEECCC------CCEEEE-ecCCeEEEEEccCCce-----------EEEecccCCCeEEEEEecCCCEEEEe
Q psy10867         76 ICPGRISSMQASPD------AAYIAV-SIETKLHMWQISSGRL-----------LATASSHYQPITIVKWSADSNFIVTG  137 (343)
Q Consensus        76 ~~~~~v~~~~~s~~------~~~l~~-~~d~~i~v~~~~~~~~-----------~~~~~~~~~~v~~~~~~~~~~~l~s~  137 (343)
                      .|.+.|.+++|+|+      +.+||+ +.|++|++||+.++..           ...+.+|...|.+++|+++ ..|++|
T Consensus       205 ~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~-~~lasg  283 (524)
T 2j04_B          205 HSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP-TTVVCG  283 (524)
T ss_dssp             ECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS-SEEEEE
T ss_pred             ecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC-CeEEEE
Confidence            67789999999997      568886 7899999999987632           2367789999999999986 489999


Q ss_pred             cCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEE--EeecCCCceEEEEeeCCCeEEEEecC
Q psy10867        138 GEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHV--TLSKLGAKSRVASVSHDRTCKIFDLC  215 (343)
Q Consensus       138 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~~~~~l~~~~~d~~i~~wd~~  215 (343)
                      +.||+|++||++++..                     +...+.+|...|.++  +|+|+++ .+|++++.|++|++||++
T Consensus       284 s~DgtV~lWD~~~~~~---------------------~~~~~~~H~~~V~sv~~~~s~~g~-~~laS~S~D~tvklWD~~  341 (524)
T 2j04_B          284 FKNGFVAEFDLTDPEV---------------------PSFYDQVHDSYILSVSTAYSDFED-TVVSTVAVDGYFYIFNPK  341 (524)
T ss_dssp             ETTSEEEEEETTBCSS---------------------CSEEEECSSSCEEEEEEECCTTSC-CEEEEEETTSEEEEECGG
T ss_pred             eCCCEEEEEECCCCCC---------------------ceEEeecccccEEEEEEEcCCCCC-eEEEEeccCCeEEEEECC
Confidence            9999999999986421                     344567899999999  5677642 589999999999999999


Q ss_pred             CCceEEEee-cC--CcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCC
Q psy10867        216 TGEDLLSLI-LD--TRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGI  292 (343)
Q Consensus       216 ~~~~~~~~~-~~--~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~  292 (343)
                      +++....+. +.  ..+.+++|+|+++.+++++.|+.|++||++....           +..+.+|.+.|++++|+|+++
T Consensus       342 ~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~-----------~~~l~gH~~~V~sva~Sp~g~  410 (524)
T 2j04_B          342 DIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFA-----------VHPLVSRETTITAIGVSRLHP  410 (524)
T ss_dssp             GHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTC-----------CEEEEECSSCEEEEECCSSCC
T ss_pred             CCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECccccc-----------ceeeecCCCceEEEEeCCCCC
Confidence            988765554 32  3478999999999999999999999999987432           445778999999999999999


Q ss_pred             EEEEEeCCCcEEEEecc
Q psy10867        293 TLLSSSADETLKIWHTI  309 (343)
Q Consensus       293 ~l~s~~~dg~i~iwd~~  309 (343)
                      +|++|+.||+|++||+.
T Consensus       411 ~l~Sgs~Dgtv~lwd~~  427 (524)
T 2j04_B          411 MVLAGSADGSLIITNAA  427 (524)
T ss_dssp             BCEEEETTTEEECCBSC
T ss_pred             eEEEEECCCEEEEEech
Confidence            99999999999999853

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=100.00  E-value=7.1e-41  Score=281.79  Aligned_cols=271  Identities=16%  Similarity=0.205  Sum_probs=225.5

Q ss_pred             eEEEecCCCCeEEEEecCCc-e---EEEEEecCCCCcceEEEEeC-CceEEEEEcCCCeEEEEeCCCc-------cccee
Q psy10867          6 EVAFSYDGSGAISVWEPKGG-T---LLMSYKGASVLSPHSMCLLG-NDYVLGVEKGKPMIQAWPVNSQ-------EKAQL   73 (343)
Q Consensus         6 ~~~~s~~~dg~i~iwd~~~~-~---~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~i~iw~~~~~-------~~~~~   73 (343)
                      .++++++++|.|+||++... +   .+..+.+|.. .|.+++|+| ++.++++++.||.|++|++.++       +.+..
T Consensus        48 ~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~-~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~  126 (402)
T 2aq5_A           48 ALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTA-PVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVIT  126 (402)
T ss_dssp             EEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSS-CEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEE
T ss_pred             EEEEEEcCCCEEEEEECccCCCCCCCCceEecCCC-CEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEE
Confidence            34556788999999998654 2   3456788999 999999999 8999999999999999999987       45667


Q ss_pred             cccCCcceEEEEECCCC-CEEEE-ecCCeEEEEEccCCceEEEe--cccCCCeEEEEEecCCCEEEEecCCCeEEEeecC
Q psy10867         74 RLICPGRISSMQASPDA-AYIAV-SIETKLHMWQISSGRLLATA--SSHYQPITIVKWSADSNFIVTGGEDGTICVWQLS  149 (343)
Q Consensus        74 ~~~~~~~v~~~~~s~~~-~~l~~-~~d~~i~v~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~  149 (343)
                      +.+|...|.+++|+|++ .+|++ +.|+.|++||+.+++.+..+  ..|...|.+++|+|++++|++++.||.|++||++
T Consensus       127 ~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~  206 (402)
T 2aq5_A          127 LEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPR  206 (402)
T ss_dssp             EECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETT
T ss_pred             ecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCC
Confidence            77899999999999998 57776 68999999999999999998  7899999999999999999999999999999999


Q ss_pred             ccceeeeeecCCCCCCCCccccccceeeee-cccccc-eEEEEeecCCCceEEEEe---eCCCeEEEEecCCCce---EE
Q psy10867        150 RLICKQTVAFGIPGSSGKGVTGLTEPLHVK-SQHSLP-VTHVTLSKLGAKSRVASV---SHDRTCKIFDLCTGED---LL  221 (343)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-v~~~~~~~~~~~~~l~~~---~~d~~i~~wd~~~~~~---~~  221 (343)
                      ++..                      +..+ ..|... +.++.|+|++  .+++++   +.|+.|++||+++++.   ..
T Consensus       207 ~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~--~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~  262 (402)
T 2aq5_A          207 KGTV----------------------VAEKDRPHEGTRPVHAVFVSEG--KILTTGFSRMSERQVALWDTKHLEEPLSLQ  262 (402)
T ss_dssp             TTEE----------------------EEEEECSSCSSSCCEEEECSTT--EEEEEEECTTCCEEEEEEETTBCSSCSEEE
T ss_pred             CCce----------------------eeeeccCCCCCcceEEEEcCCC--cEEEEeccCCCCceEEEEcCccccCCceEE
Confidence            8653                      3333 467665 8999999998  889998   7999999999998765   33


Q ss_pred             EeecCCcEEEEEEcCCCCEEEE-EcCCCcEEEEEeecccccccccccCCCCCCcccc--ccCcEEEEEEccCCCEEEEEe
Q psy10867        222 SLILDTRLTCVAFDGTEDNIYM-GTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIG--HEKQVTSLSCSITGITLLSSS  298 (343)
Q Consensus       222 ~~~~~~~i~~~~~~~~~~~l~~-~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~s~~  298 (343)
                      .+.+...+.+++|+|++++|++ |+.|+.|++||+......          +..+..  |...|.+++|+|++.++++  
T Consensus       263 ~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~----------~~~l~~~~~~~~v~~~~~sp~~~~~~s--  330 (402)
T 2aq5_A          263 ELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPF----------LHYLSMFSSKESQRGMGYMPKRGLEVN--  330 (402)
T ss_dssp             ECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTC----------EEEEEEECCSSCCSEEEECCGGGSCGG--
T ss_pred             eccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcc----------eEeecccccCCcccceEEeccccccee--
Confidence            3346778999999999999975 557999999999875421          112222  5689999999999998775  


Q ss_pred             CCCcEEEEeccccee
Q psy10867        299 ADETLKIWHTISRQC  313 (343)
Q Consensus       299 ~dg~i~iwd~~~~~~  313 (343)
                      .++.+++|++.++++
T Consensus       331 ~~~~~~~~~l~~~~~  345 (402)
T 2aq5_A          331 KCEIARFYKLHERKC  345 (402)
T ss_dssp             GTEEEEEEEEETTEE
T ss_pred             cceeEEEEEcCCCcE
Confidence            466999999987654

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=100.00  E-value=6.8e-40  Score=270.42  Aligned_cols=278  Identities=12%  Similarity=0.119  Sum_probs=221.4

Q ss_pred             EEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcc----cceecccCCcceEEEEECC--CCCEEEE-ecCCeE
Q psy10867         29 MSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQE----KAQLRLICPGRISSMQASP--DAAYIAV-SIETKL  101 (343)
Q Consensus        29 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~----~~~~~~~~~~~v~~~~~s~--~~~~l~~-~~d~~i  101 (343)
                      ..+.+|.. .|++++|+|++.++++++.||.|++||+.++.    ....+..|...|.+++|+|  ++++|++ +.|+.|
T Consensus         5 ~~~~gH~~-~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v   83 (351)
T 3f3f_A            5 PFDSGHDD-LVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTV   83 (351)
T ss_dssp             CEECCCSS-CEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCE
T ss_pred             ccCccccc-ceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeE
Confidence            34678998 99999999999999999999999999998763    4455668999999999999  5888887 689999


Q ss_pred             EEEEccCC---------ceEEEecccCCCeEEEEEecC--CCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccc
Q psy10867        102 HMWQISSG---------RLLATASSHYQPITIVKWSAD--SNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVT  170 (343)
Q Consensus       102 ~v~~~~~~---------~~~~~~~~~~~~v~~~~~~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  170 (343)
                      ++||+.++         +.+..+..|...|.+++|+|+  +++|++++.||.|++||+++......+.....        
T Consensus        84 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~--------  155 (351)
T 3f3f_A           84 KLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSE--------  155 (351)
T ss_dssp             EEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEE--------
T ss_pred             EEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccccccc--------
Confidence            99999887         557788899999999999999  99999999999999999988765443221000        


Q ss_pred             cccceeeeecccccceEEEEeecC---CCceEEEEeeCCCeEEEEecCCCce--EEEee-cCCcEEEEEEcCCC----CE
Q psy10867        171 GLTEPLHVKSQHSLPVTHVTLSKL---GAKSRVASVSHDRTCKIFDLCTGED--LLSLI-LDTRLTCVAFDGTE----DN  240 (343)
Q Consensus       171 ~~~~~~~~~~~~~~~v~~~~~~~~---~~~~~l~~~~~d~~i~~wd~~~~~~--~~~~~-~~~~i~~~~~~~~~----~~  240 (343)
                       ..........|...+.+++|+|+   +  .++++++.++.+.+|+...++.  +..+. |...|.+++|+|++    ++
T Consensus       156 -~~~~~~~~~~~~~~~~~~~~~p~~~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~  232 (351)
T 3f3f_A          156 -MKVLSIPPANHLQSDFCLSWCPSRFSP--EKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQL  232 (351)
T ss_dssp             -EESCSCCCSSCSCCCEEEEECCCSSSC--CEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEE
T ss_pred             -ccccccccCCcccceeEEEeccCCCCC--cEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceE
Confidence             00001112357889999999997   6  7999999999998888877765  44444 67889999999998    89


Q ss_pred             EEEEcCCCcEEEEEeeccccccccc-----------------------------------ccCCCCCCccccccCcEEEE
Q psy10867        241 IYMGTSEGVIKSFCLRQVPRTRDHH-----------------------------------IQDSTSNPDFIGHEKQVTSL  285 (343)
Q Consensus       241 l~~~~~d~~i~i~d~~~~~~~~~~~-----------------------------------~~~~~~~~~~~~~~~~v~~~  285 (343)
                      |++++.||.|++||++.........                                   ......+..+.+|...|+++
T Consensus       233 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~  312 (351)
T 3f3f_A          233 IATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSV  312 (351)
T ss_dssp             EEEEETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEE
T ss_pred             EEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEE
Confidence            9999999999999998753211100                                   00012345567899999999


Q ss_pred             EEccCCCEEEEEeCCCcEEEEecccceeeeecc
Q psy10867        286 SCSITGITLLSSSADETLKIWHTISRQCLRTIQ  318 (343)
Q Consensus       286 ~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~  318 (343)
                      +|+|++++|++++.||.|++||+.+++.+..+.
T Consensus       313 ~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~  345 (351)
T 3f3f_A          313 SWNLTGTILSSAGDDGKVRLWKATYSNEFKCMS  345 (351)
T ss_dssp             EECSSSCCEEEEETTSCEEEEEECTTSCEEEEE
T ss_pred             EEcCCCCEEEEecCCCcEEEEecCcCcchhhee
Confidence            999999999999999999999999886655543

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=100.00  E-value=6.8e-40  Score=275.60  Aligned_cols=265  Identities=18%  Similarity=0.197  Sum_probs=223.5

Q ss_pred             cceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceeccc-CCcceEEEEECCCCCEEEE-ecCCeEEEEEccCCceEEEe
Q psy10867         38 SPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLI-CPGRISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATA  115 (343)
Q Consensus        38 ~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~  115 (343)
                      .+.+++|++ +.+++++.+ +.|++|++.+++....... |...|.+++|+|++++|++ +.||.|++||+.+++.+..+
T Consensus        95 ~~~~~~~s~-~~l~~~~~d-~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~  172 (401)
T 4aez_A           95 YLNLLDWSN-LNVVAVALE-RNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTM  172 (401)
T ss_dssp             TCBCEEECT-TSEEEEEET-TEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred             eEEEEeecC-CCEEEEECC-CeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEe
Confidence            455677776 345555555 9999999999987765554 7889999999999999997 57999999999999999999


Q ss_pred             cccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCC
Q psy10867        116 SSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLG  195 (343)
Q Consensus       116 ~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  195 (343)
                      .+|...|.+++|  +++.+++++.||.|++||++...                     .....+.+|...|.+++|+|++
T Consensus       173 ~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~---------------------~~~~~~~~~~~~v~~~~~~~~~  229 (401)
T 4aez_A          173 AGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIAN---------------------HQIGTLQGHSSEVCGLAWRSDG  229 (401)
T ss_dssp             CCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSS---------------------CEEEEEECCSSCEEEEEECTTS
T ss_pred             cCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCc---------------------ceeeEEcCCCCCeeEEEEcCCC
Confidence            999999999999  46799999999999999998532                     2556677899999999999998


Q ss_pred             CceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCC-EEEEEc--CCCcEEEEEeecccccccccccCCCC
Q psy10867        196 AKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTED-NIYMGT--SEGVIKSFCLRQVPRTRDHHIQDSTS  271 (343)
Q Consensus       196 ~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~-~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~~  271 (343)
                        .+|++++.|+.|++||+++++....+. +...+.+++|+|++. ++++++  .|+.|++||+.+....          
T Consensus       230 --~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~----------  297 (401)
T 4aez_A          230 --LQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARV----------  297 (401)
T ss_dssp             --SEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEE----------
T ss_pred             --CEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEE----------
Confidence              899999999999999999999888776 788899999999775 555554  7999999999875432          


Q ss_pred             CCccccccCcEEEEEEccCCCEEEEE--eCCCcEEEEecccceeeee--cc-cCCceEEEEEccCCCeeeecccC
Q psy10867        272 NPDFIGHEKQVTSLSCSITGITLLSS--SADETLKIWHTISRQCLRT--IQ-HKGPVLGAFLGLLPPAIHDYDFT  341 (343)
Q Consensus       272 ~~~~~~~~~~v~~~~~s~~~~~l~s~--~~dg~i~iwd~~~~~~~~~--~~-~~~~v~~~~~sp~~~~l~~~~~~  341 (343)
                       ..+ .+...|.+++|+|++++++++  +.||.|++||+.+++....  +. |...|.+++|+|++++|++++..
T Consensus       298 -~~~-~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~d  370 (401)
T 4aez_A          298 -NTV-DAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASD  370 (401)
T ss_dssp             -EEE-ECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTT
T ss_pred             -EEE-eCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCC
Confidence             223 356789999999999999984  4899999999998765554  44 88999999999999999998753

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=100.00  E-value=3.7e-40  Score=281.34  Aligned_cols=283  Identities=12%  Similarity=0.222  Sum_probs=217.2

Q ss_pred             ccceEEEecCC--------CCeEEEEecCCce-----------EEEEEecCC------------CCcceEEEEeCCc--e
Q psy10867          3 LLNEVAFSYDG--------SGAISVWEPKGGT-----------LLMSYKGAS------------VLSPHSMCLLGND--Y   49 (343)
Q Consensus         3 ~v~~~~~s~~~--------dg~i~iwd~~~~~-----------~~~~~~~~~------------~~~v~~~~~~~~~--~   49 (343)
                      +|.++.|++++        ||.|+|||+.+++           ....+.+|.            . .|.+++|+|++  .
T Consensus        30 ~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~-~V~~l~~~~~~~~~  108 (447)
T 3dw8_B           30 IISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEE-KINKIRWLPQKNAA  108 (447)
T ss_dssp             SEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECC-CCCEEEECCCCSSS
T ss_pred             cEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccC-ceEEEEEcCCCCcc
Confidence            45666666655        8999999998877           588899997            7 89999999997  6


Q ss_pred             EEEEEcCCCeEEEEeCCCcccc----------------------------------------eecccCCcceEEEEECCC
Q psy10867         50 VLGVEKGKPMIQAWPVNSQEKA----------------------------------------QLRLICPGRISSMQASPD   89 (343)
Q Consensus        50 ~~~~~~~~~~i~iw~~~~~~~~----------------------------------------~~~~~~~~~v~~~~~s~~   89 (343)
                      ++++++.|+.|++|++.+++..                                        ....+|...|.+++|+|+
T Consensus       109 ~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~  188 (447)
T 3dw8_B          109 QFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSD  188 (447)
T ss_dssp             EEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTT
T ss_pred             eEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCC
Confidence            7777778899999998765431                                        113579999999999999


Q ss_pred             CCEEEEecCCeEEEEEccC-CceEE-------EecccCCCeEEEEEecCC-CEEEEecCCCeEEEeecCccceeeeeecC
Q psy10867         90 AAYIAVSIETKLHMWQISS-GRLLA-------TASSHYQPITIVKWSADS-NFIVTGGEDGTICVWQLSRLICKQTVAFG  160 (343)
Q Consensus        90 ~~~l~~~~d~~i~v~~~~~-~~~~~-------~~~~~~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~  160 (343)
                      +++|+++.|+.|++||+.+ ++.+.       .+.+|...|.+++|+|++ ++|++|+.||.|++||++++....     
T Consensus       189 ~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~-----  263 (447)
T 3dw8_B          189 YETYLSADDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCD-----  263 (447)
T ss_dssp             SSEEEEECSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSC-----
T ss_pred             CCEEEEeCCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCcccc-----
Confidence            9999988899999999984 44444       356899999999999998 999999999999999999875311     


Q ss_pred             CCCCCCCccccccceeeeecccc------------cceEEEEeecCCCceEEEEeeCCCeEEEEecCC-CceEEEeecCC
Q psy10867        161 IPGSSGKGVTGLTEPLHVKSQHS------------LPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCT-GEDLLSLILDT  227 (343)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~------------~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~-~~~~~~~~~~~  227 (343)
                                   .....+..|.            ..|.+++|+|++  .+|++++. +.|++||+++ ++.+..+....
T Consensus       264 -------------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g--~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~  327 (447)
T 3dw8_B          264 -------------RHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSG--RYMMTRDY-LSVKVWDLNMENRPVETYQVHE  327 (447)
T ss_dssp             -------------TTCEEECCC-----CCHHHHHTTCEEEEEECTTS--SEEEEEES-SEEEEEETTCCSSCSCCEESCG
T ss_pred             -------------ceeeEeccCCCccccccccccCceEEEEEECCCC--CEEEEeeC-CeEEEEeCCCCccccceeeccc
Confidence                         0123344444            499999999999  79999998 9999999997 77777776433


Q ss_pred             c----------------EEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccC-CC--------------------
Q psy10867        228 R----------------LTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQD-ST--------------------  270 (343)
Q Consensus       228 ~----------------i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-~~--------------------  270 (343)
                      .                +..++|+|++++|++|+.||.|++||+.+........... ..                    
T Consensus       328 ~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  407 (447)
T 3dw8_B          328 YLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRKKDE  407 (447)
T ss_dssp             GGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSCCCTTC
T ss_pred             cccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcceeeeecccccccccccCCccccccCCccccc
Confidence            3                3349999999999999999999999998754321000000 00                    


Q ss_pred             CCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEec
Q psy10867        271 SNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHT  308 (343)
Q Consensus       271 ~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~  308 (343)
                      .......+...|..++|+|++++||+++.++ +++|..
T Consensus       408 ~~~~~~~~~~~i~~~~~~p~~~~la~~~~~~-~~~~~~  444 (447)
T 3dw8_B          408 ISVDSLDFNKKILHTAWHPKENIIAVATTNN-LYIFQD  444 (447)
T ss_dssp             EEGGGCCTTSCCCEEEECSSSSEEEEECSSC-EEEEEC
T ss_pred             ccccccccCCceeEEEECCCCCEEEEEecce-eeeecc
Confidence            0000113456789999999999999998875 788864

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.3e-40  Score=283.25  Aligned_cols=278  Identities=15%  Similarity=0.228  Sum_probs=215.8

Q ss_pred             ccceEEEec---------CCCCeEEEEecCC---ce---EEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCC-
Q psy10867          3 LLNEVAFSY---------DGSGAISVWEPKG---GT---LLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVN-   66 (343)
Q Consensus         3 ~v~~~~~s~---------~~dg~i~iwd~~~---~~---~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~-   66 (343)
                      +|+++.|++         +.||.|+|||+.+   +.   ....+ .|.. .|.+++|+|++.++++++.||.|++||++ 
T Consensus        65 ~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~-~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~  142 (437)
T 3gre_A           65 SITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSS-TVTQITMIPNFDAFAVSSKDGQIIVLKVNH  142 (437)
T ss_dssp             CEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSS-CEEEEEECTTSSEEEEEETTSEEEEEEEEE
T ss_pred             ceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-cCCC-CEEEEEEeCCCCEEEEEeCCCEEEEEEecc
Confidence            455555555         4489999999876   43   22333 4777 99999999999999999999999999995 


Q ss_pred             --Ccccceecc----------c--CCcceEEEE--ECCCCCEEEE-ecCCeEEEEEccCCceEEEecc--cCCCeEEEEE
Q psy10867         67 --SQEKAQLRL----------I--CPGRISSMQ--ASPDAAYIAV-SIETKLHMWQISSGRLLATASS--HYQPITIVKW  127 (343)
Q Consensus        67 --~~~~~~~~~----------~--~~~~v~~~~--~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~--~~~~v~~~~~  127 (343)
                        +++......          .  +...+.++.  +++++.+|++ +.|+.|++||+++++.+..+..  |.+.|.+++|
T Consensus       143 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~  222 (437)
T 3gre_A          143 YQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICI  222 (437)
T ss_dssp             EEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEE
T ss_pred             ccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEE
Confidence              443332221          1  455667776  5678888887 6889999999999999999988  8999999999


Q ss_pred             ecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeec-ccccceEEEEeec----CCCceEEEE
Q psy10867        128 SADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKS-QHSLPVTHVTLSK----LGAKSRVAS  202 (343)
Q Consensus       128 ~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~----~~~~~~l~~  202 (343)
                      +|++++|++|+.||.|++||++++...                      ..+. .|...|.+++++|    ++  .++++
T Consensus       223 s~~~~~l~s~~~dg~i~iwd~~~~~~~----------------------~~~~~~~~~~v~~~~~~~~~s~~~--~~l~s  278 (437)
T 3gre_A          223 DEECCVLILGTTRGIIDIWDIRFNVLI----------------------RSWSFGDHAPITHVEVCQFYGKNS--VIVVG  278 (437)
T ss_dssp             CTTSCEEEEEETTSCEEEEETTTTEEE----------------------EEEBCTTCEEEEEEEECTTTCTTE--EEEEE
T ss_pred             CCCCCEEEEEcCCCeEEEEEcCCccEE----------------------EEEecCCCCceEEEEeccccCCCc--cEEEE
Confidence            999999999999999999999986533                      3332 5778999997665    45  79999


Q ss_pred             eeCCCeEEEEecCCCceEEEee---------------------------cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEe
Q psy10867        203 VSHDRTCKIFDLCTGEDLLSLI---------------------------LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCL  255 (343)
Q Consensus       203 ~~~d~~i~~wd~~~~~~~~~~~---------------------------~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~  255 (343)
                      ++.|+.|++||+++++.+..+.                           +...|.+++|+ ++++|++|+.|+.|++||+
T Consensus       279 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~  357 (437)
T 3gre_A          279 GSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSL  357 (437)
T ss_dssp             ESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEET
T ss_pred             EcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEEC
Confidence            9999999999999998877776                           33458889999 7799999999999999999


Q ss_pred             ecccccccccc--------------------------cCCCCCCccccccCcEEEEEEccC--CCEEEEEeCCCcEEEEe
Q psy10867        256 RQVPRTRDHHI--------------------------QDSTSNPDFIGHEKQVTSLSCSIT--GITLLSSSADETLKIWH  307 (343)
Q Consensus       256 ~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~s~~~dg~i~iwd  307 (343)
                      .+......+..                          ...........|...|++++|+++  +.+|++|+.||.|++|+
T Consensus       358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~  437 (437)
T 3gre_A          358 NELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ  437 (437)
T ss_dssp             TCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred             CCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence            87665443321                          011112233459999999999998  77999999999999995

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=100.00  E-value=6.1e-40  Score=276.10  Aligned_cols=269  Identities=14%  Similarity=0.164  Sum_probs=222.7

Q ss_pred             cceEEEEeCCceE-EEEEcCCCeEEEEeCCCcc----cceecccCCcceEEEEECC-CCCEEEE-ecCCeEEEEEccCC-
Q psy10867         38 SPHSMCLLGNDYV-LGVEKGKPMIQAWPVNSQE----KAQLRLICPGRISSMQASP-DAAYIAV-SIETKLHMWQISSG-  109 (343)
Q Consensus        38 ~v~~~~~~~~~~~-~~~~~~~~~i~iw~~~~~~----~~~~~~~~~~~v~~~~~s~-~~~~l~~-~~d~~i~v~~~~~~-  109 (343)
                      ....++++|+... +++++.+|.|++|++....    ....+.+|.+.|.+++|+| ++++|++ +.|+.|++||+.++ 
T Consensus        36 ~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~  115 (402)
T 2aq5_A           36 DSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGG  115 (402)
T ss_dssp             SSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTC
T ss_pred             CCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCC
Confidence            4567888988754 4456777999999986542    2345668999999999999 8899987 67999999999987 


Q ss_pred             ------ceEEEecccCCCeEEEEEecCC-CEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeee--c
Q psy10867        110 ------RLLATASSHYQPITIVKWSADS-NFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVK--S  180 (343)
Q Consensus       110 ------~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~  180 (343)
                            +.+..+.+|...|.+++|+|++ ++|++++.||.|++||+++++                      ....+  .
T Consensus       116 ~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~----------------------~~~~~~~~  173 (402)
T 2aq5_A          116 LVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGA----------------------AVLTLGPD  173 (402)
T ss_dssp             CSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTE----------------------EEEEECTT
T ss_pred             CccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCC----------------------ccEEEecC
Confidence                  5678888999999999999998 699999999999999999864                      34444  6


Q ss_pred             ccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEe-e-cCCc-EEEEEEcCCCCEEEEE---cCCCcEEEEE
Q psy10867        181 QHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSL-I-LDTR-LTCVAFDGTEDNIYMG---TSEGVIKSFC  254 (343)
Q Consensus       181 ~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~-~-~~~~-i~~~~~~~~~~~l~~~---~~d~~i~i~d  254 (343)
                      .|...|.+++|+|++  .+|++++.|+.|++||+++++.+..+ . +... +.+++|+|++++|++|   +.|+.|++||
T Consensus       174 ~~~~~v~~~~~~~~~--~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd  251 (402)
T 2aq5_A          174 VHPDTIYSVDWSRDG--ALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWD  251 (402)
T ss_dssp             TCCSCEEEEEECTTS--SCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEE
T ss_pred             CCCCceEEEEECCCC--CEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEc
Confidence            799999999999998  89999999999999999999998887 3 4444 8999999999999999   7999999999


Q ss_pred             eecccccccccccCCCCCCccccccCcEEEEEEccCCCEEE-EEeCCCcEEEEeccccee-eeecc---cCCceEEEEEc
Q psy10867        255 LRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLL-SSSADETLKIWHTISRQC-LRTIQ---HKGPVLGAFLG  329 (343)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-s~~~dg~i~iwd~~~~~~-~~~~~---~~~~v~~~~~s  329 (343)
                      ++.......         .....|...+.+++|+|++++|+ +++.||.|++||+.+++. +..+.   +..+|.+++|+
T Consensus       252 ~~~~~~~~~---------~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~s  322 (402)
T 2aq5_A          252 TKHLEEPLS---------LQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYM  322 (402)
T ss_dssp             TTBCSSCSE---------EEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEEC
T ss_pred             CccccCCce---------EEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEe
Confidence            987543211         11124677899999999999987 455799999999998873 44443   56899999999


Q ss_pred             cCCCeeeecc
Q psy10867        330 LLPPAIHDYD  339 (343)
Q Consensus       330 p~~~~l~~~~  339 (343)
                      |++.++++++
T Consensus       323 p~~~~~~s~~  332 (402)
T 2aq5_A          323 PKRGLEVNKC  332 (402)
T ss_dssp             CGGGSCGGGT
T ss_pred             cccccceecc
Confidence            9999987654

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=100.00  E-value=8.5e-39  Score=270.50  Aligned_cols=267  Identities=19%  Similarity=0.220  Sum_probs=225.7

Q ss_pred             CCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecc--cCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCCceE
Q psy10867         36 VLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRL--ICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGRLL  112 (343)
Q Consensus        36 ~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~  112 (343)
                      ++.++.|+|++++ +||+|.+ ++|+|||..+++..+.+.  .|...|++++|+|+|++|++ +.|+.|++||+.+++.+
T Consensus       105 d~y~~~l~wS~~n-~lAvgld-~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~  182 (420)
T 4gga_A          105 DYYLNLVDWSSGN-VLAVALD-NSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRL  182 (420)
T ss_dssp             CTTCBCEEECTTS-EEEEEET-TEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE
T ss_pred             cccceeEEECCCC-EEEEEeC-CEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEE
Confidence            3356789999875 6777775 899999999998776544  67788999999999999997 68999999999999999


Q ss_pred             EEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEee
Q psy10867        113 ATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLS  192 (343)
Q Consensus       113 ~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  192 (343)
                      ..+.+|...+.++.+  ++..+++|+.|+.+++||......                     .+..+.+|...+..+.++
T Consensus       183 ~~~~~h~~~v~~~s~--~~~~l~sgs~d~~i~~~d~~~~~~---------------------~~~~~~~h~~~~~~~~~~  239 (420)
T 4gga_A          183 RNMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEH---------------------HVATLSGHSQEVCGLRWA  239 (420)
T ss_dssp             EEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSC---------------------EEEEEECCSSCEEEEEEC
T ss_pred             EEEeCCCCceEEEee--CCCEEEEEeCCCceeEeeecccce---------------------eeEEecccccceeeeeec
Confidence            999999999998877  468999999999999999887532                     556678899999999999


Q ss_pred             cCCCceEEEEeeCCCeEEEEecCCCce----EE-EeecCCcEEEEEEcCCCC-EEEE--EcCCCcEEEEEeecccccccc
Q psy10867        193 KLGAKSRVASVSHDRTCKIFDLCTGED----LL-SLILDTRLTCVAFDGTED-NIYM--GTSEGVIKSFCLRQVPRTRDH  264 (343)
Q Consensus       193 ~~~~~~~l~~~~~d~~i~~wd~~~~~~----~~-~~~~~~~i~~~~~~~~~~-~l~~--~~~d~~i~i~d~~~~~~~~~~  264 (343)
                      |++  .++++++.|+.+++||..+++.    +. ...+...|.+++|+|.+. .+++  |+.|+.|++||+.+.....  
T Consensus       240 ~~g--~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~--  315 (420)
T 4gga_A          240 PDG--RHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLS--  315 (420)
T ss_dssp             TTS--SEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEE--
T ss_pred             CCC--CeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccce--
Confidence            999  8999999999999999987753    22 334778899999999765 4444  4579999999998755432  


Q ss_pred             cccCCCCCCccccccCcEEEEEEccCCCEEEEEe--CCCcEEEEecccceeeeecc-cCCceEEEEEccCCCeeeecccC
Q psy10867        265 HIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSS--ADETLKIWHTISRQCLRTIQ-HKGPVLGAFLGLLPPAIHDYDFT  341 (343)
Q Consensus       265 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~--~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~~  341 (343)
                               .+. +...+.++.|+|+++.+++++  .|+.|++||+.+++++.++. |.+.|++++|+|||++|++++..
T Consensus       316 ---------~~~-~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D  385 (420)
T 4gga_A          316 ---------AVD-AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAAD  385 (420)
T ss_dssp             ---------EEE-CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETT
T ss_pred             ---------eec-cccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecC
Confidence                     233 346789999999999888765  78999999999999999999 99999999999999999998753

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=100.00  E-value=5.7e-38  Score=263.23  Aligned_cols=291  Identities=12%  Similarity=0.083  Sum_probs=236.3

Q ss_pred             eEEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEE-EEEcCCCeEEEEeCCCcccceecccCCcceEEE
Q psy10867          6 EVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVL-GVEKGKPMIQAWPVNSQEKAQLRLICPGRISSM   84 (343)
Q Consensus         6 ~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~   84 (343)
                      .++++++.|+.|++||+.+++.+..+..|.  .+.+++|+|++..+ +++..++.|++||+.+++.+..+..+. .+.++
T Consensus         3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~--~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~   79 (391)
T 1l0q_A            3 FAYIANSESDNISVIDVTSNKVTATIPVGS--NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGV   79 (391)
T ss_dssp             EEEEEETTTTEEEEEETTTTEEEEEEECSS--SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEE
T ss_pred             EEEEEcCCCCEEEEEECCCCeEEEEeecCC--CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-Cccce
Confidence            467888899999999999999999999886  68999999999755 677677999999999998876665444 89999


Q ss_pred             EECCCCCEEEE-e-cCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEE-EEecCCCeEEEeecCccceeeeeecCC
Q psy10867         85 QASPDAAYIAV-S-IETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFI-VTGGEDGTICVWQLSRLICKQTVAFGI  161 (343)
Q Consensus        85 ~~s~~~~~l~~-~-~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~s~~~dg~i~iwd~~~~~~~~~~~~~~  161 (343)
                      +|+|++++|+. + .++.|++||+.+++.+..+..+ ..+.+++|+|+++.+ ++++.++.|++||+.+++....     
T Consensus        80 ~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~-----  153 (391)
T 1l0q_A           80 AVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG-KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINT-----  153 (391)
T ss_dssp             EECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEE-----
T ss_pred             EECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEE-----
Confidence            99999998764 4 5699999999999888877755 468999999999977 7888899999999988754332     


Q ss_pred             CCCCCCccccccceeeeecccccceEEEEeecCCCceEE-EEeeCCCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCE
Q psy10867        162 PGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRV-ASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDN  240 (343)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l-~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~  240 (343)
                                       +.. ...+.+++|+|++  ..+ ++++.++.|++||+++++....+.+...+.+++|+|++++
T Consensus       154 -----------------~~~-~~~~~~~~~~~dg--~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~  213 (391)
T 1l0q_A          154 -----------------VSV-GRSPKGIAVTPDG--TKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTK  213 (391)
T ss_dssp             -----------------EEC-CSSEEEEEECTTS--SEEEEEETTTTEEEEEETTTTEEEEEEECSSEEEEEEECTTSSE
T ss_pred             -----------------Eec-CCCcceEEECCCC--CEEEEEeCCCCEEEEEECCCCeEEEEEecCCCccceEECCCCCE
Confidence                             222 3457899999998  555 6788899999999999999888888889999999999999


Q ss_pred             EEEEc---CCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEE-EEEeCCCcEEEEecccceeeee
Q psy10867        241 IYMGT---SEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITL-LSSSADETLKIWHTISRQCLRT  316 (343)
Q Consensus       241 l~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~s~~~dg~i~iwd~~~~~~~~~  316 (343)
                      |++++   .++.|++||+.+...           +..+..|. .+.+++|+|++++| ++++.|+.|++||+.+++.+..
T Consensus       214 l~~~~~~~~~~~v~~~d~~~~~~-----------~~~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~  281 (391)
T 1l0q_A          214 AYVTNVDKYFNTVSMIDTGTNKI-----------TARIPVGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITAT  281 (391)
T ss_dssp             EEEEEECSSCCEEEEEETTTTEE-----------EEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred             EEEEecCcCCCcEEEEECCCCeE-----------EEEEecCC-CccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEE
Confidence            99987   689999999986543           22334443 57899999999877 6778899999999999999888


Q ss_pred             cc-cCCce---EEEEEccCCCeeee
Q psy10867        317 IQ-HKGPV---LGAFLGLLPPAIHD  337 (343)
Q Consensus       317 ~~-~~~~v---~~~~~sp~~~~l~~  337 (343)
                      +. +..+.   ..+.+.|++..+..
T Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~~~  306 (391)
T 1l0q_A          282 MAVGKNPYASGQFIGSIPVQPVYPS  306 (391)
T ss_dssp             EECSSSEECCSSCEEECSSCCCCCB
T ss_pred             EECCcCCCccceeeecccccccccc
Confidence            87 43332   22556665555433

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=100.00  E-value=2.8e-38  Score=257.60  Aligned_cols=265  Identities=20%  Similarity=0.224  Sum_probs=224.0

Q ss_pred             cceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecc--cCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCCceEEE
Q psy10867         38 SPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRL--ICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGRLLAT  114 (343)
Q Consensus        38 ~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~  114 (343)
                      ..++|+||+++ +||+|.+ ++|+|||+++++.++.+.  .|...|.+++|+|++++|++ +.|+.|++|++++++.+..
T Consensus        27 y~~~l~WS~~~-~lAvg~D-~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~  104 (318)
T 4ggc_A           27 YLNLVDWSSGN-VLAVALD-NSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRN  104 (318)
T ss_dssp             TCBCEEECTTS-EEEEEET-TEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEE
T ss_pred             cceEEEECCCC-EEEEEeC-CEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEE
Confidence            35789999987 6777765 899999999998876554  67788999999999999997 6899999999999999999


Q ss_pred             ecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecC
Q psy10867        115 ASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKL  194 (343)
Q Consensus       115 ~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  194 (343)
                      +.+|...+.++.+  ++..+++++.++.+++|+......                     .+..+.+|...+..+.+.++
T Consensus       105 ~~~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~  161 (318)
T 4ggc_A          105 MTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEH---------------------HVATLSGHSQEVCGLRWAPD  161 (318)
T ss_dssp             EECCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSC---------------------EEEEEECCSSCEEEEEECTT
T ss_pred             ecCccceEEEeec--CCCEEEEEecCCceEeeecCCCce---------------------eEEEEcCccCceEEEEEcCC
Confidence            9999998876554  578999999999999999887532                     55667789999999999999


Q ss_pred             CCceEEEEeeCCCeEEEEecCCCceE-----EEeecCCcEEEEEEcCCCCEE---EEEcCCCcEEEEEeecccccccccc
Q psy10867        195 GAKSRVASVSHDRTCKIFDLCTGEDL-----LSLILDTRLTCVAFDGTEDNI---YMGTSEGVIKSFCLRQVPRTRDHHI  266 (343)
Q Consensus       195 ~~~~~l~~~~~d~~i~~wd~~~~~~~-----~~~~~~~~i~~~~~~~~~~~l---~~~~~d~~i~i~d~~~~~~~~~~~~  266 (343)
                      +  .++++++.|+.|++||+++++..     ....+...+.++.++|++..+   ++++.++.|++||.......     
T Consensus       162 ~--~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~-----  234 (318)
T 4ggc_A          162 G--RHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACL-----  234 (318)
T ss_dssp             S--SEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEE-----
T ss_pred             C--CEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccc-----
Confidence            9  89999999999999999987642     222367789999999987643   35678899999998764432     


Q ss_pred             cCCCCCCccccccCcEEEEEEccCCCEEEEEe--CCCcEEEEecccceeeeecc-cCCceEEEEEccCCCeeeecccC
Q psy10867        267 QDSTSNPDFIGHEKQVTSLSCSITGITLLSSS--ADETLKIWHTISRQCLRTIQ-HKGPVLGAFLGLLPPAIHDYDFT  341 (343)
Q Consensus       267 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~--~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~~  341 (343)
                             ....+...+..+.|+|+++.+++++  .|+.|++||+.+++++.++. |.+.|++++|+|++++|++++..
T Consensus       235 -------~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D  305 (318)
T 4ggc_A          235 -------SAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAAD  305 (318)
T ss_dssp             -------EEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETT
T ss_pred             -------ccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecC
Confidence                   2345677899999999999887654  79999999999999999999 99999999999999999998754

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=100.00  E-value=3.1e-39  Score=272.34  Aligned_cols=290  Identities=16%  Similarity=0.184  Sum_probs=221.3

Q ss_pred             EEEecCCCCeEEEEecCCceEEEEEe-------------cCCCCcceEEEEeC-CceEEEEEcCCCeEEEEeCCCcccce
Q psy10867          7 VAFSYDGSGAISVWEPKGGTLLMSYK-------------GASVLSPHSMCLLG-NDYVLGVEKGKPMIQAWPVNSQEKAQ   72 (343)
Q Consensus         7 ~~~s~~~dg~i~iwd~~~~~~~~~~~-------------~~~~~~v~~~~~~~-~~~~~~~~~~~~~i~iw~~~~~~~~~   72 (343)
                      .+++++.||.|++||+.+++....+.             +|.. .|.+++|+| ++.++++++.||.|++||+.+++...
T Consensus        58 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~  136 (408)
T 4a11_B           58 YMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRY-SVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTAD  136 (408)
T ss_dssp             EEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSS-CEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEE
T ss_pred             EEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCC-cEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccce
Confidence            33444448999999999876655443             4777 999999999 77788888888999999999988776


Q ss_pred             ecccCCcceEEEEECCCC---CEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCC-EEEEecCCCeEEEee
Q psy10867         73 LRLICPGRISSMQASPDA---AYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSN-FIVTGGEDGTICVWQ  147 (343)
Q Consensus        73 ~~~~~~~~v~~~~~s~~~---~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~dg~i~iwd  147 (343)
                      .+ .+...+.++.|+|.+   .++++ +.++.|++||+.+++.+..+..|...|.+++|+|+++ .+++++.||.|++||
T Consensus       137 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d  215 (408)
T 4a11_B          137 VF-NFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWD  215 (408)
T ss_dssp             EE-ECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEE
T ss_pred             ec-cCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEE
Confidence            55 477889999999854   47776 6889999999999999999999999999999999998 589999999999999


Q ss_pred             cCccce-eeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeec-
Q psy10867        148 LSRLIC-KQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLIL-  225 (343)
Q Consensus       148 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~-  225 (343)
                      ++.... ...+....       .............|...|.+++|+|++  .+|++++.|+.|++||+++++....... 
T Consensus       216 ~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~~~dg~i~vwd~~~~~~~~~~~~~  286 (408)
T 4a11_B          216 VRRASGCLITLDQHN-------GKKSQAVESANTAHNGKVNGLCFTSDG--LHLLTVGTDNRMRLWNSSNGENTLVNYGK  286 (408)
T ss_dssp             TTCSSCCSEECCTTT-------TCSCCCTTTSSCSCSSCEEEEEECTTS--SEEEEEETTSCEEEEETTTCCBCCCCCCC
T ss_pred             CCCCCcccccccccc-------cccceeeccccccccCceeEEEEcCCC--CEEEEecCCCeEEEEECCCCccceecccc
Confidence            987642 11111000       000111223335789999999999998  8999999999999999998876544321 


Q ss_pred             -----CCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCC
Q psy10867        226 -----DTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSAD  300 (343)
Q Consensus       226 -----~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d  300 (343)
                           ...+........+..+++++.++.|++||+.+...           +..+.+|...|++++|+|++++|++++.|
T Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~-----------~~~~~~~~~~v~~~~~s~~~~~l~s~~~d  355 (408)
T 4a11_B          287 VCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQ-----------ITMLKGHYKTVDCCVFQSNFQELYSGSRD  355 (408)
T ss_dssp             CCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCE-----------EEEECCCSSCEEEEEEETTTTEEEEEETT
T ss_pred             ccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcc-----------eeeeccCCCeEEEEEEcCCCCEEEEECCC
Confidence                 11222223334456677778899999999987543           55677899999999999999999999999


Q ss_pred             CcEEEEecccceeeeecc
Q psy10867        301 ETLKIWHTISRQCLRTIQ  318 (343)
Q Consensus       301 g~i~iwd~~~~~~~~~~~  318 (343)
                      |.|++||+.+++.+....
T Consensus       356 g~i~iw~~~~~~~~~~~~  373 (408)
T 4a11_B          356 CNILAWVPSLYEPVPDDD  373 (408)
T ss_dssp             SCEEEEEECC--------
T ss_pred             CeEEEEeCCCCCccCCCC
Confidence            999999999988776654

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=9.5e-40  Score=294.70  Aligned_cols=254  Identities=14%  Similarity=0.170  Sum_probs=213.6

Q ss_pred             EEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCC--CcccceecccCCcceEEEEECCC--CCEEEE-ecCCeEE
Q psy10867         28 LMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVN--SQEKAQLRLICPGRISSMQASPD--AAYIAV-SIETKLH  102 (343)
Q Consensus        28 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~--~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~-~~d~~i~  102 (343)
                      +..+.+|.+ .|++++|+|++.++++++.||.|++||+.  +++....+.+|.+.|.+++|+|+  +++|++ +.||.|+
T Consensus         2 ~~~l~gH~~-~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~   80 (753)
T 3jro_A            2 VVIANAHNE-LIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVL   80 (753)
T ss_dssp             ------CCC-CEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEE
T ss_pred             eeecccCcc-eeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEE
Confidence            356789999 99999999999999999888999999997  55666777799999999999988  888887 6899999


Q ss_pred             EEEccCCc--eEEEecccCCCeEEEEEecC--CCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeee
Q psy10867        103 MWQISSGR--LLATASSHYQPITIVKWSAD--SNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHV  178 (343)
Q Consensus       103 v~~~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (343)
                      +||+.+++  .+..+.+|...|.+++|+|+  ++.+++|+.||.|++||++.....                    ....
T Consensus        81 vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~--------------------~~~~  140 (753)
T 3jro_A           81 IWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTT--------------------SPII  140 (753)
T ss_dssp             EEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCC--------------------CCEE
T ss_pred             EEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCc--------------------ceeE
Confidence            99999986  67788899999999999999  999999999999999999876322                    3344


Q ss_pred             ecccccceEEEEeecC-------------CCceEEEEeeCCCeEEEEecCCCce----EEEee-cCCcEEEEEEcCC---
Q psy10867        179 KSQHSLPVTHVTLSKL-------------GAKSRVASVSHDRTCKIFDLCTGED----LLSLI-LDTRLTCVAFDGT---  237 (343)
Q Consensus       179 ~~~~~~~v~~~~~~~~-------------~~~~~l~~~~~d~~i~~wd~~~~~~----~~~~~-~~~~i~~~~~~~~---  237 (343)
                      +.+|...|.+++|+|.             +  .++++++.||.|++||++++..    ...+. |...|.+++|+|+   
T Consensus       141 ~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~--~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~  218 (753)
T 3jro_A          141 IDAHAIGVNSASWAPATIEEDGEHNGTKES--RKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLL  218 (753)
T ss_dssp             EECCSSCEEEEEECCCC---------CGGG--CCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSS
T ss_pred             eecCCCceEEEEecCcccccccccccCCCC--CEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCC
Confidence            5679999999999994             5  7999999999999999988743    33443 6888999999999   


Q ss_pred             CCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEeccc
Q psy10867        238 EDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTIS  310 (343)
Q Consensus       238 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~  310 (343)
                      ++++++++.||.|++||+.........      .......|...|++++|+|++++|++++.||.|++|++.+
T Consensus       219 ~~~l~s~s~Dg~I~iwd~~~~~~~~~~------~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~  285 (753)
T 3jro_A          219 RSYLASVSQDRTCIIWTQDNEQGPWKK------TLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL  285 (753)
T ss_dssp             SEEEEEEESSSCEEEEEESSSSSCCBC------CBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCS
T ss_pred             CCEEEEEecCCEEEEecCCCCCCccee------EEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCC
Confidence            899999999999999999875432211      1334556889999999999999999999999999999874

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=100.00  E-value=1.3e-39  Score=264.80  Aligned_cols=241  Identities=15%  Similarity=0.157  Sum_probs=193.4

Q ss_pred             ecccCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCCc--eEEEecccCCCeEEEEEec--CCCEEEEecCCCeEEEee
Q psy10867         73 LRLICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGR--LLATASSHYQPITIVKWSA--DSNFIVTGGEDGTICVWQ  147 (343)
Q Consensus        73 ~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~--~~~~~~~~~~~v~~~~~~~--~~~~l~s~~~dg~i~iwd  147 (343)
                      .+.+|.+.|.+++|+|+|++|++ +.|++|++||+.++.  .+..+.+|.+.|.+++|+|  ++++|++|+.|++|++||
T Consensus         8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd   87 (316)
T 3bg1_A            8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWR   87 (316)
T ss_dssp             ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEEC
T ss_pred             ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEE
Confidence            34589999999999999999997 689999999998875  4677889999999999986  489999999999999999


Q ss_pred             cCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEE---Ee-
Q psy10867        148 LSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLL---SL-  223 (343)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~---~~-  223 (343)
                      ++++..                    +....+.+|...|.+++|+|+..+.+|++++.|+.|++||++.+....   .+ 
T Consensus        88 ~~~~~~--------------------~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~  147 (316)
T 3bg1_A           88 EENGTW--------------------EKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINN  147 (316)
T ss_dssp             CSSSCC--------------------CEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTT
T ss_pred             CCCCcc--------------------eEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeec
Confidence            987531                    134556789999999999998322799999999999999998764322   12 


Q ss_pred             ecCCcEEEEEEcCC-----------------CCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEE
Q psy10867        224 ILDTRLTCVAFDGT-----------------EDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLS  286 (343)
Q Consensus       224 ~~~~~i~~~~~~~~-----------------~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  286 (343)
                      .|...+.+++|+|+                 +++|++|+.|+.|++||++......        +...+.+|...|.+++
T Consensus       148 ~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~--------~~~~l~~h~~~V~~v~  219 (316)
T 3bg1_A          148 AHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWK--------EEQKLEAHSDWVRDVA  219 (316)
T ss_dssp             SSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEE--------EEECCBCCSSCEEEEE
T ss_pred             cccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccc--------eeeecccCCCceEEEE
Confidence            25677999999997                 4789999999999999996432111        1345778999999999


Q ss_pred             EccCC----CEEEEEeCCCcEEEEecccc---e-eeeecc-cCCceEEEEEccCCCeeeecccC
Q psy10867        287 CSITG----ITLLSSSADETLKIWHTISR---Q-CLRTIQ-HKGPVLGAFLGLLPPAIHDYDFT  341 (343)
Q Consensus       287 ~s~~~----~~l~s~~~dg~i~iwd~~~~---~-~~~~~~-~~~~v~~~~~sp~~~~l~~~~~~  341 (343)
                      |+|++    ++|++++.|++|++|++.+.   + ....+. |...|.+++|+|++++|++++..
T Consensus       220 ~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D  283 (316)
T 3bg1_A          220 WAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGD  283 (316)
T ss_dssp             CCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESS
T ss_pred             ecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCC
Confidence            99986    78999999999999998763   1 122334 78899999999999999998754

>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1

Probab=100.00  E-value=2.5e-38  Score=268.88  Aligned_cols=263  Identities=21%  Similarity=0.333  Sum_probs=228.3

Q ss_pred             ecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCCc
Q psy10867         32 KGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGR  110 (343)
Q Consensus        32 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~  110 (343)
                      .+|.. .|.++++  ++.++++|+.||.|++||+.+++....+.+|...|.+++|  ++++|++ +.||.|++||+.+++
T Consensus       130 ~~~~~-~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~  204 (435)
T 1p22_A          130 SETSK-GVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGE  204 (435)
T ss_dssp             CSSCC-CEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCC
T ss_pred             cCCCC-cEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCc
Confidence            34555 6777766  7888888888899999999999988888899999999999  6778886 689999999999999


Q ss_pred             eEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEE
Q psy10867        111 LLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVT  190 (343)
Q Consensus       111 ~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  190 (343)
                      .+..+.+|...|.+++|+  +..+++|+.||.|++||+.+.....                   ....+.+|...|.+++
T Consensus       205 ~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~~~~-------------------~~~~~~~~~~~v~~~~  263 (435)
T 1p22_A          205 MLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDIT-------------------LRRVLVGHRAAVNVVD  263 (435)
T ss_dssp             EEEEECCCCSCEEEEECC--TTEEEEEETTSCEEEEECSSSSCCE-------------------EEEEECCCSSCEEEEE
T ss_pred             EEEEEcCCCCcEEEEEEc--CCEEEEeeCCCcEEEEeCCCCCCce-------------------eeeEecCCCCcEEEEE
Confidence            999999999999999996  4699999999999999998764322                   3356678999999999


Q ss_pred             eecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCC
Q psy10867        191 LSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDS  269 (343)
Q Consensus       191 ~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~  269 (343)
                      +  ++  .++++++.||.|++||+++++.+..+. +...+.++.++  ++++++|+.||.|++||+++...         
T Consensus       264 ~--~~--~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~g~~dg~i~iwd~~~~~~---------  328 (435)
T 1p22_A          264 F--DD--KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGAC---------  328 (435)
T ss_dssp             E--ET--TEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCE---------
T ss_pred             e--CC--CEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeC--CCEEEEEeCCCeEEEEECCCCCE---------
Confidence            9  44  689999999999999999999998887 67889999994  78999999999999999987543         


Q ss_pred             CCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccce---------eeeecc-cCCceEEEEEccCCCeeeecc
Q psy10867        270 TSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQ---------CLRTIQ-HKGPVLGAFLGLLPPAIHDYD  339 (343)
Q Consensus       270 ~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~---------~~~~~~-~~~~v~~~~~sp~~~~l~~~~  339 (343)
                        +..+.+|...|.+++|  ++++|++|+.||.|++||+.+++         ++..+. |.+.|.+++|  ++++|++++
T Consensus       329 --~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s  402 (435)
T 1p22_A          329 --LRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSS  402 (435)
T ss_dssp             --EEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECC
T ss_pred             --EEEEeCCcCcEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEe
Confidence              4567789999999998  78899999999999999998876         777777 9999999999  788899887


Q ss_pred             cC
Q psy10867        340 FT  341 (343)
Q Consensus       340 ~~  341 (343)
                      ..
T Consensus       403 ~D  404 (435)
T 1p22_A          403 HD  404 (435)
T ss_dssp             SS
T ss_pred             CC
Confidence            54

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3e-38  Score=269.50  Aligned_cols=278  Identities=10%  Similarity=-0.001  Sum_probs=221.5

Q ss_pred             cceEEEEeCCceEEEEEcCCCeEEEEeCCCcc---cceecc---------------------------------------
Q psy10867         38 SPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQE---KAQLRL---------------------------------------   75 (343)
Q Consensus        38 ~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~---~~~~~~---------------------------------------   75 (343)
                      ++.+++|+|+|.+++++.+ +.|++||+.+++   .+..+.                                       
T Consensus         6 p~~~v~~s~dg~~l~~~~~-~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (450)
T 2vdu_B            6 PLQNLLTSRDGSLVFAIIK-NCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDSI   84 (450)
T ss_dssp             CCCEEEECSSSSEEEEEET-TEEEEEEEETTTEEEEEEEEECCC------------------------------------
T ss_pred             cEEEEEecCCCCEEEEEeC-CeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCccc
Confidence            7899999999998888876 899999998887   433222                                       


Q ss_pred             ---------------cCCcceEEEEECCCCCEE-EE-ecCCeEEEEEcc--CCceEEEec--ccCCCeEEEEEecCCCEE
Q psy10867         76 ---------------ICPGRISSMQASPDAAYI-AV-SIETKLHMWQIS--SGRLLATAS--SHYQPITIVKWSADSNFI  134 (343)
Q Consensus        76 ---------------~~~~~v~~~~~s~~~~~l-~~-~~d~~i~v~~~~--~~~~~~~~~--~~~~~v~~~~~~~~~~~l  134 (343)
                                     .|.+.|.+++|+|++++| ++ +.|+.|++||+.  +++.+..+.  .|...|.+++|+|++++|
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l  164 (450)
T 2vdu_B           85 KRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTV  164 (450)
T ss_dssp             ---------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEE
T ss_pred             cccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEE
Confidence                           233369999999999986 65 579999999999  888888876  567899999999999999


Q ss_pred             EEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecC---CCceEEEEeeCCCeEEE
Q psy10867        135 VTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKL---GAKSRVASVSHDRTCKI  211 (343)
Q Consensus       135 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~~~l~~~~~d~~i~~  211 (343)
                      ++++.+|.|++|++.+.....                  .....+.+|...|.+++|+|+   +  .+|++++.|+.|++
T Consensus       165 ~~~~~~g~v~~~~~~~~~~~~------------------~~~~~~~~h~~~v~~~~~sp~~~~~--~~l~s~~~d~~i~v  224 (450)
T 2vdu_B          165 IIADKFGDVYSIDINSIPEEK------------------FTQEPILGHVSMLTDVHLIKDSDGH--QFIITSDRDEHIKI  224 (450)
T ss_dssp             EEEETTSEEEEEETTSCCCSS------------------CCCCCSEECSSCEEEEEEEECTTSC--EEEEEEETTSCEEE
T ss_pred             EEEeCCCcEEEEecCCccccc------------------ccceeeecccCceEEEEEcCCCCCC--cEEEEEcCCCcEEE
Confidence            999999999999998764321                  022355679999999999999   7  89999999999999


Q ss_pred             EecCCCceEEEee--cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCC-CC-------------CCcc
Q psy10867        212 FDLCTGEDLLSLI--LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDS-TS-------------NPDF  275 (343)
Q Consensus       212 wd~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~-~~-------------~~~~  275 (343)
                      ||+++++.+..+.  |...|.+++|+ ++++|++++.|+.|++||+.+......+..... ..             ....
T Consensus       225 wd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  303 (450)
T 2vdu_B          225 SHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENN  303 (450)
T ss_dssp             EEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC---------
T ss_pred             EECCCCceeeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhccccccccccccc
Confidence            9999998887743  78899999999 999999999999999999987654333211000 00             0000


Q ss_pred             ccccCcEEEEEEccCCCEEEEEe-CCCcEEEEec--ccc---eeeeecccCCceEEEEEccCCCeeee
Q psy10867        276 IGHEKQVTSLSCSITGITLLSSS-ADETLKIWHT--ISR---QCLRTIQHKGPVLGAFLGLLPPAIHD  337 (343)
Q Consensus       276 ~~~~~~v~~~~~s~~~~~l~s~~-~dg~i~iwd~--~~~---~~~~~~~~~~~v~~~~~sp~~~~l~~  337 (343)
                      ......|.+++|+|++++|++++ .|+.|++|++  .++   +.+..+...+.|.+++|+|++.++++
T Consensus       304 ~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~v~~  371 (450)
T 2vdu_B          304 DIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFPYNVISLSAHNDEFQVTL  371 (450)
T ss_dssp             -CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECSSCEEEEEEETTEEEEEE
T ss_pred             ccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccCCceEEEEecCCcEEEEE
Confidence            12346799999999999999998 8999999999  565   66777774489999999996544443

>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=100.00  E-value=9.5e-41  Score=280.57  Aligned_cols=274  Identities=12%  Similarity=0.029  Sum_probs=219.8

Q ss_pred             ccceEEEecCCCCeEEEEecCCceEEEEEe-cCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCc--
Q psy10867          3 LLNEVAFSYDGSGAISVWEPKGGTLLMSYK-GASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPG--   79 (343)
Q Consensus         3 ~v~~~~~s~~~dg~i~iwd~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~--   79 (343)
                      .|.++.|+|++  .++.|++.+++....+. .|.. .|.+++|+|+|..+|+++.||.|++|+.++  .+..+. |..  
T Consensus        54 ~v~~V~FsPdg--~~~~~~~~~~~~~~~~~~~~~~-~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~  127 (588)
T 2j04_A           54 NLFHVKEFPLE--FENKLDFELAQQNGLLNSQPVC-YPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNL  127 (588)
T ss_dssp             GTEEEEEECCC--CCCTTTTSCCCSSCSSTTSCSC-CEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCS
T ss_pred             cEEEEEECCCC--CcceEEEEeCCCceEeecCCCC-cEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCcc
Confidence            45677788776  56667766655433443 4456 899999999999999999999999999655  444444 554  


Q ss_pred             ---ceEEEEECCCCCEEEE-ecCCeEEEEEccCCce-------EEEe----cccCCCeEEEEEecCCCEEEEecCCCeEE
Q psy10867         80 ---RISSMQASPDAAYIAV-SIETKLHMWQISSGRL-------LATA----SSHYQPITIVKWSADSNFIVTGGEDGTIC  144 (343)
Q Consensus        80 ---~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~-------~~~~----~~~~~~v~~~~~~~~~~~l~s~~~dg~i~  144 (343)
                         .|.+++|||||++||+ +.||+|++||+.++..       +.++    .+|.+.|.+++|+|++  +++++.|+.|+
T Consensus       128 ~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVr  205 (588)
T 2j04_A          128 SSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVF  205 (588)
T ss_dssp             TTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEE
T ss_pred             ccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEE
Confidence               5999999999999997 6799999999998853       5665    6788899999999999  88889999999


Q ss_pred             EeecCccceeeeeecCCCCCCCCccccccceeeee-cccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCce-EEE
Q psy10867        145 VWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVK-SQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGED-LLS  222 (343)
Q Consensus       145 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~-~~~  222 (343)
                      +||+.......                   ..+.+ .+|...|.+++|+  +  ..+++++ +++|++||+.+++. ...
T Consensus       206 lWd~~~~~~~~-------------------~~~tL~~~h~~~V~svaFs--g--~~LASa~-~~tIkLWd~~~~~~~~~~  261 (588)
T 2j04_A          206 SMTVSASSHQP-------------------VSRMIQNASRRKITDLKIV--D--YKVVLTC-PGYVHKIDLKNYSISSLK  261 (588)
T ss_dssp             EECCCSSSSCC-------------------CEEEEECCCSSCCCCEEEE--T--TEEEEEC-SSEEEEEETTTTEEEEEE
T ss_pred             EEECCCCcccc-------------------ceeeecccccCcEEEEEEE--C--CEEEEEe-CCeEEEEECCCCeEEEEE
Confidence            99998764210                   12334 3688999999999  4  5888887 69999999998887 444


Q ss_pred             eecCCcEEEEEE--cCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCC
Q psy10867        223 LILDTRLTCVAF--DGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSAD  300 (343)
Q Consensus       223 ~~~~~~i~~~~~--~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d  300 (343)
                      +.|...+..++|  +|++..+++++.+|+ ++|...                           .++++||+..+++.  |
T Consensus       262 ~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d---------------------------~~~~spd~~l~a~~--d  311 (588)
T 2j04_A          262 TGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLED---------------------------ELHVTADNIIAPYL--E  311 (588)
T ss_dssp             CSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESS---------------------------SEEEECCCSSHHHH--H
T ss_pred             cCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec---------------------------cEEECCCceEEEEc--C
Confidence            468889999999  999999999999999 999754                           15689999888875  8


Q ss_pred             CcEEEEecccceeeeecccCCceEEEEEccCCCeeeecc
Q psy10867        301 ETLKIWHTISRQCLRTIQHKGPVLGAFLGLLPPAIHDYD  339 (343)
Q Consensus       301 g~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~  339 (343)
                      +++++|+...+ .+..+++...|.+++|||||+.+++++
T Consensus       312 ~~v~lW~~~g~-~l~~~~~~~~I~~va~SPdG~~lA~~~  349 (588)
T 2j04_A          312 KKFKKWSTIWN-EFNNYETTLVIHGISLSPDGYSIAIVY  349 (588)
T ss_dssp             HHHHHTTTTTT-SSSSSCCEEEEEEEEECTTSSEEEEEE
T ss_pred             CEEEEEECCCC-ceeeeccceEEEEEEECCCCCEEEEEE
Confidence            99999997544 455666766799999999999999765

>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*

Probab=100.00  E-value=9e-38  Score=266.36  Aligned_cols=264  Identities=18%  Similarity=0.280  Sum_probs=228.1

Q ss_pred             eEEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEE
Q psy10867          6 EVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQ   85 (343)
Q Consensus         6 ~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~   85 (343)
                      .++++++.||.|++||+.+++.+..+.+|.. .|.++++++  ..+++++.||.|++||+.+++.+..+..|...|.+++
T Consensus       170 ~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~-~v~~~~~~~--~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~  246 (445)
T 2ovr_B          170 NIIISGSTDRTLKVWNAETGECIHTLYGHTS-TVRCMHLHE--KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQ  246 (445)
T ss_dssp             TEEEEEETTSCEEEEETTTTEEEEEECCCSS-CEEEEEEET--TEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEE
T ss_pred             CEEEEEeCCCeEEEEECCcCcEEEEECCCCC-cEEEEEecC--CEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEE
Confidence            4577888899999999999999999999999 999999964  4577777779999999999998888889999999999


Q ss_pred             ECCCCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCC
Q psy10867         86 ASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGS  164 (343)
Q Consensus        86 ~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~  164 (343)
                      |  ++.++++ +.|+.|++||+.+++.+..+.+|...|.+++|  ++.++++++.||.|++||+++++            
T Consensus       247 ~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~------------  310 (445)
T 2ovr_B          247 Y--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGN------------  310 (445)
T ss_dssp             E--CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCC------------
T ss_pred             E--CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCC------------
Confidence            9  5666665 78999999999999999999999999999999  78999999999999999998864            


Q ss_pred             CCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee----cCCcEEEEEEcCCCCE
Q psy10867        165 SGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI----LDTRLTCVAFDGTEDN  240 (343)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~----~~~~i~~~~~~~~~~~  240 (343)
                                .+..+.+|...+.++.++  +  .++++++.||.|++||+++++.+..+.    +...|.+++|+  +++
T Consensus       311 ----------~~~~~~~~~~~v~~~~~~--~--~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~  374 (445)
T 2ovr_B          311 ----------CIHTLTGHQSLTSGMELK--D--NILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNF  374 (445)
T ss_dssp             ----------EEEEECCCCSCEEEEEEE--T--TEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSE
T ss_pred             ----------EEEEEcCCcccEEEEEEe--C--CEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCE
Confidence                      445556788889888875  3  689999999999999999999988886    56789999996  689


Q ss_pred             EEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCc----EEEEeccc
Q psy10867        241 IYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADET----LKIWHTIS  310 (343)
Q Consensus       241 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~----i~iwd~~~  310 (343)
                      |++|+.||.|++||+.+.+......      .....+|.+.|++++|+|++.++++|+.||.    |.+||+..
T Consensus       375 l~s~~~dg~v~iwd~~~~~~~~~~~------~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~  442 (445)
T 2ovr_B          375 VITSSDDGTVKLWDLKTGEFIRNLV------TLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDV  442 (445)
T ss_dssp             EEEEETTSEEEEEETTTCCEEEEEE------ECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred             EEEEeCCCeEEEEECCCCceeeeee------ccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCC
Confidence            9999999999999998765433221      0112468889999999999999999999998    99999864

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=4.5e-38  Score=262.64  Aligned_cols=244  Identities=16%  Similarity=0.202  Sum_probs=204.9

Q ss_pred             ccceecccCCcceEEEEECCCCCEEEE-ecCCeEEEEEcc--CCceEEEecccCCCeEEEEEecC--CCEEEEecCCCeE
Q psy10867         69 EKAQLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQIS--SGRLLATASSHYQPITIVKWSAD--SNFIVTGGEDGTI  143 (343)
Q Consensus        69 ~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~--~~~~~~~~~~~~~~v~~~~~~~~--~~~l~s~~~dg~i  143 (343)
                      +.+..+.+|.+.|.+++|+|++++|++ +.|+.|++|++.  +++.+..+.+|...|.+++|+|+  +++|++++.||.|
T Consensus         2 ~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v   81 (379)
T 3jrp_A            2 SMVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKV   81 (379)
T ss_dssp             ---CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCE
T ss_pred             CccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEE
Confidence            445667799999999999999999997 579999999998  55677888999999999999976  8999999999999


Q ss_pred             EEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecC--CCceEEEEeeCCCeEEEEecCCCceE-
Q psy10867        144 CVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKL--GAKSRVASVSHDRTCKIFDLCTGEDL-  220 (343)
Q Consensus       144 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~l~~~~~d~~i~~wd~~~~~~~-  220 (343)
                      ++||+.++...                    ....+..|...|.+++|+|+  +  .++++++.|+.|++||++++... 
T Consensus        82 ~iwd~~~~~~~--------------------~~~~~~~~~~~v~~~~~~~~~~~--~~l~~~~~d~~i~v~d~~~~~~~~  139 (379)
T 3jrp_A           82 LIWKEENGRWS--------------------QIAVHAVHSASVNSVQWAPHEYG--PLLLVASSDGKVSVVEFKENGTTS  139 (379)
T ss_dssp             EEEEEETTEEE--------------------EEEEECCCSSCEEEEEECCGGGC--SEEEEEETTSEEEEEECCTTSCCC
T ss_pred             EEEEcCCCcee--------------------EeeeecCCCcceEEEEeCCCCCC--CEEEEecCCCcEEEEecCCCCcee
Confidence            99999886421                    44556679999999999999  7  79999999999999999987432 


Q ss_pred             -EEe-ecCCcEEEEEEcC-------------CCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEE
Q psy10867        221 -LSL-ILDTRLTCVAFDG-------------TEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSL  285 (343)
Q Consensus       221 -~~~-~~~~~i~~~~~~~-------------~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  285 (343)
                       ..+ .+...+.+++|+|             ++.++++++.|+.|++||++........       ...+.+|...|+++
T Consensus       140 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-------~~~~~~h~~~v~~~  212 (379)
T 3jrp_A          140 PIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVL-------ESTLEGHSDWVRDV  212 (379)
T ss_dssp             EEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEE-------EEEECCCSSCEEEE
T ss_pred             eEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceee-------EEEEecccCcEeEE
Confidence             223 3788899999999             6999999999999999999875433221       34577899999999


Q ss_pred             EEccC---CCEEEEEeCCCcEEEEecccce-----eeeecc-cCCceEEEEEccCCCeeeecccC
Q psy10867        286 SCSIT---GITLLSSSADETLKIWHTISRQ-----CLRTIQ-HKGPVLGAFLGLLPPAIHDYDFT  341 (343)
Q Consensus       286 ~~s~~---~~~l~s~~~dg~i~iwd~~~~~-----~~~~~~-~~~~v~~~~~sp~~~~l~~~~~~  341 (343)
                      +|+|+   +++|++++.||.|++||+.+++     .+.... +...|.+++|+|++++|++++..
T Consensus       213 ~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d  277 (379)
T 3jrp_A          213 AWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGD  277 (379)
T ss_dssp             EECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESS
T ss_pred             EECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCC
Confidence            99999   8999999999999999998863     222222 78899999999999999988653

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=100.00  E-value=1.9e-37  Score=263.50  Aligned_cols=286  Identities=11%  Similarity=0.045  Sum_probs=236.9

Q ss_pred             eEEEEecCCc--eEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccce-----ecccCCcceEEEEECC
Q psy10867         16 AISVWEPKGG--TLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQ-----LRLICPGRISSMQASP   88 (343)
Q Consensus        16 ~i~iwd~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~-----~~~~~~~~v~~~~~s~   88 (343)
                      .|..||..++  +.+..+..+.  .+.+++|+|++.+++++..++.|++||+.+++...     .+..|...|.+++|+|
T Consensus       102 ~l~~~d~~~~~~~~~~~~~~~~--~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~  179 (433)
T 3bws_A          102 KLIALDKEGITHRFISRFKTGF--QPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPE  179 (433)
T ss_dssp             CEEECCBTTCSEEEEEEEECSS--CBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGG
T ss_pred             EEEEECCCCCcceEEEEEcCCC--CceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcC
Confidence            5555666445  6677777665  56799999988999999888999999999888765     3447888999999999


Q ss_pred             CCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEE-EecCCCeEEEeecCccceeeeeecCCCCCCC
Q psy10867         89 DAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIV-TGGEDGTICVWQLSRLICKQTVAFGIPGSSG  166 (343)
Q Consensus        89 ~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~  166 (343)
                      +++++++ +.|+.|++||+++++.+..+..|...+.+++|+|+++.++ +++.|+.|++||+++++....          
T Consensus       180 ~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~----------  249 (433)
T 3bws_A          180 HNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRK----------  249 (433)
T ss_dssp             GTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEE----------
T ss_pred             CCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEE----------
Confidence            9998887 5789999999999999999988999999999999999875 555899999999988754332          


Q ss_pred             CccccccceeeeecccccceEEEEeecCCCceEEEEee--------CCCeEEEEecCCCceEEEeecCCcEEEEEEcCCC
Q psy10867        167 KGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVS--------HDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTE  238 (343)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~--------~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~  238 (343)
                                  +. +...+.+++|+|++  .++++++        .|+.|++||+++++.+..+.+...+.+++|+|++
T Consensus       250 ------------~~-~~~~~~~~~~~~~g--~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g  314 (433)
T 3bws_A          250 ------------TD-KIGLPRGLLLSKDG--KELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTE  314 (433)
T ss_dssp             ------------CC-CCSEEEEEEECTTS--SEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSST
T ss_pred             ------------ec-CCCCceEEEEcCCC--CEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCC
Confidence                        22 23458999999999  6788777        5889999999999888888777789999999999


Q ss_pred             CEE-EEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeC---------------CCc
Q psy10867        239 DNI-YMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSA---------------DET  302 (343)
Q Consensus       239 ~~l-~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~---------------dg~  302 (343)
                      +.+ ++++.++.|++||+.+....           ..+ .+...+.+++|+|++++|++++.               ||.
T Consensus       315 ~~l~~~~~~~~~v~v~d~~~~~~~-----------~~~-~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~  382 (433)
T 3bws_A          315 NKIYVSDMCCSKIEVYDLKEKKVQ-----------KSI-PVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGK  382 (433)
T ss_dssp             TEEEEEETTTTEEEEEETTTTEEE-----------EEE-ECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCE
T ss_pred             CEEEEEecCCCEEEEEECCCCcEE-----------EEe-cCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceE
Confidence            865 55688999999999864432           222 35677999999999998888876               579


Q ss_pred             EEEEecccceeeeecccCCceEEEEEccCCCeeeeccc
Q psy10867        303 LKIWHTISRQCLRTIQHKGPVLGAFLGLLPPAIHDYDF  340 (343)
Q Consensus       303 i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~  340 (343)
                      |++||+.+++.+..+.....+.+++|+|++++|++++.
T Consensus       383 v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~  420 (433)
T 3bws_A          383 VYVIDTTTDTVKEFWEAGNQPTGLDVSPDNRYLVISDF  420 (433)
T ss_dssp             EEEEETTTTEEEEEEECSSSEEEEEECTTSCEEEEEET
T ss_pred             EEEEECCCCcEEEEecCCCCCceEEEcCCCCEEEEEEC
Confidence            99999999999998887778999999999999987753

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=100.00  E-value=3.7e-38  Score=259.58  Aligned_cols=259  Identities=12%  Similarity=0.052  Sum_probs=216.7

Q ss_pred             EEecCCCCeEEEEecCCce---EEEEEecCCCCcceEEEEeCCce-EEEEEcCCCeEEEEeC-CCcccceeccc--CCcc
Q psy10867          8 AFSYDGSGAISVWEPKGGT---LLMSYKGASVLSPHSMCLLGNDY-VLGVEKGKPMIQAWPV-NSQEKAQLRLI--CPGR   80 (343)
Q Consensus         8 ~~s~~~dg~i~iwd~~~~~---~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~~~~i~iw~~-~~~~~~~~~~~--~~~~   80 (343)
                      +++++.||.|++||+.+++   ....+..|.. .|.+++|+|++. ++++++.||.|++||+ .+++. ..+..  |...
T Consensus        26 l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~-~~~~~~~~~~~  103 (342)
T 1yfq_A           26 LLITSWDGSLTVYKFDIQAKNVDLLQSLRYKH-PLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSF-QALTNNEANLG  103 (342)
T ss_dssp             EEEEETTSEEEEEEEETTTTEEEEEEEEECSS-CEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSE-EECBSCCCCSC
T ss_pred             EEEEcCCCeEEEEEeCCCCccccceeeeecCC-ceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCce-EeccccCCCCc
Confidence            3444458999999998776   4555668888 999999999999 8998888899999999 87765 45567  9999


Q ss_pred             eEEEEECCCCCEEEE-ecCCeEEEEEccC---------CceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCc
Q psy10867         81 ISSMQASPDAAYIAV-SIETKLHMWQISS---------GRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSR  150 (343)
Q Consensus        81 v~~~~~s~~~~~l~~-~~d~~i~v~~~~~---------~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~  150 (343)
                      |.+++|+| +.+|++ +.|+.|++||+++         ++++..+. |...|.+++|+|++  +++++.|+.|++||+++
T Consensus       104 v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~  179 (342)
T 1yfq_A          104 ICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPL  179 (342)
T ss_dssp             EEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSE--EEEEESTTEEEEEESSC
T ss_pred             eEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEecCCc--EEEEeCCCeEEEEECCc
Confidence            99999999 877776 7899999999987         76666666 88999999999877  99999999999999987


Q ss_pred             -cceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeec-CCCceEEEEeeCCCeEEEEecCCC------ceEEE
Q psy10867        151 -LICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSK-LGAKSRVASVSHDRTCKIFDLCTG------EDLLS  222 (343)
Q Consensus       151 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~l~~~~~d~~i~~wd~~~~------~~~~~  222 (343)
                       ....                    .......|...+.+++|+| ++  .++++++.||.+++|+++..      +....
T Consensus       180 ~~~~~--------------------~~~~~~~~~~~i~~i~~~~~~~--~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~  237 (342)
T 1yfq_A          180 CEDDN--------------------GTIEESGLKYQIRDVALLPKEQ--EGYACSSIDGRVAVEFFDDQGDDYNSSKRFA  237 (342)
T ss_dssp             CTTCC--------------------CEEEECSCSSCEEEEEECSGGG--CEEEEEETTSEEEEEECCTTCCSTTCTTCEE
T ss_pred             ccccc--------------------ceeeecCCCCceeEEEECCCCC--CEEEEEecCCcEEEEEEcCCCccccccccee
Confidence             4321                    2233446788999999999 88  79999999999999999877      66666


Q ss_pred             ee-cCC---------cEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccc-cCcEEEEEEccCC
Q psy10867        223 LI-LDT---------RLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGH-EKQVTSLSCSITG  291 (343)
Q Consensus       223 ~~-~~~---------~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~s~~~  291 (343)
                      +. +..         .+.+++|+|++++|++++.||.|++||+.+...           +..+.+| ...|++++  |++
T Consensus       238 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~-----------~~~~~~~h~~~v~~~~--~~~  304 (342)
T 1yfq_A          238 FRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKK-----------IKNFAKFNEDSVVKIA--CSD  304 (342)
T ss_dssp             EECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEE-----------EEECCCCSSSEEEEEE--ECS
T ss_pred             eecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhH-----------hhhhhcccCCCceEec--CCC
Confidence            66 433         899999999999999999999999999987544           4456777 99999999  999


Q ss_pred             CEEEEEeCCCc-EEEEe
Q psy10867        292 ITLLSSSADET-LKIWH  307 (343)
Q Consensus       292 ~~l~s~~~dg~-i~iwd  307 (343)
                      ++|++++.||. .+.|.
T Consensus       305 ~~l~s~s~Dg~~~~~~~  321 (342)
T 1yfq_A          305 NILCLATSDDTFKTNAA  321 (342)
T ss_dssp             SEEEEEEECTHHHHCSS
T ss_pred             CeEEEEecCCccccccc
Confidence            99999999998 54444

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=100.00  E-value=8.5e-38  Score=265.01  Aligned_cols=262  Identities=12%  Similarity=0.170  Sum_probs=214.4

Q ss_pred             EEEecCCCCcceEEEEeCC-ceEEEEEcCCCeEEEEeCCC----------cccceecccCCcceEEEEECCCCC-EEEE-
Q psy10867         29 MSYKGASVLSPHSMCLLGN-DYVLGVEKGKPMIQAWPVNS----------QEKAQLRLICPGRISSMQASPDAA-YIAV-   95 (343)
Q Consensus        29 ~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~i~iw~~~~----------~~~~~~~~~~~~~v~~~~~s~~~~-~l~~-   95 (343)
                      .....|.. .|++++|+|+ +.++++++.+|.|++|++..          .+....+..|...|.+++|+|++. +|++ 
T Consensus       122 ~~~~~h~~-~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~  200 (430)
T 2xyi_A          122 EIKINHEG-EVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSA  200 (430)
T ss_dssp             EEEEEESS-CCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEE
T ss_pred             EEEEcCCC-cEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEE
Confidence            44566787 9999999997 68999999889999999986          455566778999999999999988 7776 


Q ss_pred             ecCCeEEEEEccCCce-------EEEecccCCCeEEEEEec-CCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCC
Q psy10867         96 SIETKLHMWQISSGRL-------LATASSHYQPITIVKWSA-DSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGK  167 (343)
Q Consensus        96 ~~d~~i~v~~~~~~~~-------~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~  167 (343)
                      +.||.|++|++.++..       ...+.+|...|.+++|+| ++.+|++++.||.|++||+++....             
T Consensus       201 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~-------------  267 (430)
T 2xyi_A          201 SDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTS-------------  267 (430)
T ss_dssp             CTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSS-------------
T ss_pred             eCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCC-------------
Confidence            6799999999987422       356678999999999999 7789999999999999999975311             


Q ss_pred             ccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCC-CceEEEee-cCCcEEEEEEcCCCC-EEEEE
Q psy10867        168 GVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCT-GEDLLSLI-LDTRLTCVAFDGTED-NIYMG  244 (343)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~-~~~~~~~~-~~~~i~~~~~~~~~~-~l~~~  244 (343)
                            .....+..|...|++++|+|+++ .++++++.||.|++||+++ .+.+..+. |...|.+++|+|+++ +|+++
T Consensus       268 ------~~~~~~~~~~~~v~~i~~~p~~~-~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~  340 (430)
T 2xyi_A          268 ------KPSHTVDAHTAEVNCLSFNPYSE-FILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASS  340 (430)
T ss_dssp             ------SCSEEEECCSSCEEEEEECSSCT-TEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEE
T ss_pred             ------cceeEeecCCCCeEEEEeCCCCC-CEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEE
Confidence                  14455568999999999999984 4799999999999999998 45566666 788999999999985 68899


Q ss_pred             cCCCcEEEEEeeccccccccc---ccCCCCCCccccccCcEEEEEEccCCC-EEEEEeCCCcEEEEecccc
Q psy10867        245 TSEGVIKSFCLRQVPRTRDHH---IQDSTSNPDFIGHEKQVTSLSCSITGI-TLLSSSADETLKIWHTISR  311 (343)
Q Consensus       245 ~~d~~i~i~d~~~~~~~~~~~---~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~s~~~dg~i~iwd~~~~  311 (343)
                      +.|+.|++||+..........   ......+..+.+|...|++++|+|+++ +|++++.||.|++|++...
T Consensus       341 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~  411 (430)
T 2xyi_A          341 GTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAEN  411 (430)
T ss_dssp             ETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred             eCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence            999999999998743221100   000122456678999999999999999 8999999999999998754

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.1e-37  Score=264.26  Aligned_cols=274  Identities=14%  Similarity=0.085  Sum_probs=221.1

Q ss_pred             cccceEEEecCC-------CCeEEEEecCCce---EEEEEecC-------------------------------------
Q psy10867          2 SLLNEVAFSYDG-------SGAISVWEPKGGT---LLMSYKGA-------------------------------------   34 (343)
Q Consensus         2 ~~v~~~~~s~~~-------dg~i~iwd~~~~~---~~~~~~~~-------------------------------------   34 (343)
                      .|+.++.|++++       ++.|++||+.+|+   .+..+..+                                     
T Consensus         5 ~p~~~v~~s~dg~~l~~~~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (450)
T 2vdu_B            5 HPLQNLLTSRDGSLVFAIIKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDSI   84 (450)
T ss_dssp             CCCCEEEECSSSSEEEEEETTEEEEEEEETTTEEEEEEEEECCC------------------------------------
T ss_pred             ccEEEEEecCCCCEEEEEeCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCccc
Confidence            367778777776       5899999999998   66666533                                     


Q ss_pred             -----------------CCCcceEEEEeCCceEE-EEEcCCCeEEEEeCC--Ccccceecc--cCCcceEEEEECCCCCE
Q psy10867         35 -----------------SVLSPHSMCLLGNDYVL-GVEKGKPMIQAWPVN--SQEKAQLRL--ICPGRISSMQASPDAAY   92 (343)
Q Consensus        35 -----------------~~~~v~~~~~~~~~~~~-~~~~~~~~i~iw~~~--~~~~~~~~~--~~~~~v~~~~~s~~~~~   92 (343)
                                       .. .|.+++|+|++.++ ++++.||.|++|++.  +++.+..+.  .|...|.+++|+|++++
T Consensus        85 ~~~~~~~~~~~~~~~~~~~-~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~  163 (450)
T 2vdu_B           85 KRTAAKVPSPGLGAPPIYS-YIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTT  163 (450)
T ss_dssp             ---------------CCCC-CEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSE
T ss_pred             cccCccccCCCCCCCccCC-ceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCE
Confidence                             22 59999999999875 888888999999999  777776654  56789999999999999


Q ss_pred             EEE-ecCCeEEEEEccCCceEE----EecccCCCeEEEEEecC---CCEEEEecCCCeEEEeecCccceeeeeecCCCCC
Q psy10867         93 IAV-SIETKLHMWQISSGRLLA----TASSHYQPITIVKWSAD---SNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGS  164 (343)
Q Consensus        93 l~~-~~d~~i~v~~~~~~~~~~----~~~~~~~~v~~~~~~~~---~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~  164 (343)
                      |++ +.++.|++|++.+++...    .+.+|...|.+++|+|+   +++|++++.|+.|++||++++....         
T Consensus       164 l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~---------  234 (450)
T 2vdu_B          164 VIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVD---------  234 (450)
T ss_dssp             EEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEE---------
T ss_pred             EEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceee---------
Confidence            987 578999999998876543    77789999999999999   9999999999999999998764322         


Q ss_pred             CCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeec-------------------
Q psy10867        165 SGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLIL-------------------  225 (343)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~-------------------  225 (343)
                                  ..+.+|...|.+++|+ ++  .+|++++.|+.|++||+++++.+..+..                   
T Consensus       235 ------------~~~~~h~~~v~~~~~s-d~--~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (450)
T 2vdu_B          235 ------------KWLFGHKHFVSSICCG-KD--YLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQ  299 (450)
T ss_dssp             ------------EECCCCSSCEEEEEEC-ST--TEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC-----
T ss_pred             ------------eeecCCCCceEEEEEC-CC--CEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhccccccccc
Confidence                        2245799999999999 88  8999999999999999999998877752                   


Q ss_pred             -------CCcEEEEEEcCCCCEEEEEc-CCCcEEEEEe--ecccccccccccCCCCCCccccccCcEEEEEEccCCCEEE
Q psy10867        226 -------DTRLTCVAFDGTEDNIYMGT-SEGVIKSFCL--RQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLL  295 (343)
Q Consensus       226 -------~~~i~~~~~~~~~~~l~~~~-~d~~i~i~d~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~  295 (343)
                             ...+.+++|+|++++|++++ .++.|++|++  .......        .+..+..| ..|.+++|+|++.+++
T Consensus       300 ~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~--------~~~~~~~~-~~v~~~~~~~~~~~v~  370 (450)
T 2vdu_B          300 NENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLA--------LKQIITFP-YNVISLSAHNDEFQVT  370 (450)
T ss_dssp             -----CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEE--------EEEEEECS-SCEEEEEEETTEEEEE
T ss_pred             ccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCcee--------eccEeccC-CceEEEEecCCcEEEE
Confidence                   24689999999999999998 8999999999  3321111        13445666 7899999999654444


Q ss_pred             EEeC------CCcEEEEecc
Q psy10867        296 SSSA------DETLKIWHTI  309 (343)
Q Consensus       296 s~~~------dg~i~iwd~~  309 (343)
                      +++.      +..|.+|.+.
T Consensus       371 ~~~~~~~~~~~~~i~v~~~~  390 (450)
T 2vdu_B          371 LDNKESSGVQKNFAKFIEYN  390 (450)
T ss_dssp             ECCTTCCSSCCCSEEEEEEE
T ss_pred             EecccCCCCCCcceEEEEEE
Confidence            4443      4568888764

>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.1e-38  Score=266.45  Aligned_cols=248  Identities=8%  Similarity=-0.012  Sum_probs=200.9

Q ss_pred             cceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEEecCCeEEEEEccCCceEEEec-
Q psy10867         38 SPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATAS-  116 (343)
Q Consensus        38 ~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~-  116 (343)
                      .|.+++|+|||+++|+++.|++|+  |...++   .+.+|...|.+++|+|+|      .++.+.+|+.   +....+. 
T Consensus        17 ~v~sv~~SpDG~~iASas~D~TV~--d~~~~~---~l~gh~~~v~~V~FsPdg------~~~~~~~~~~---~~~~~~~~   82 (588)
T 2j04_A           17 WKNNLTWARDGTLYLTTFPDISIG--QPKYAK---DINCNSKNLFHVKEFPLE------FENKLDFELA---QQNGLLNS   82 (588)
T ss_dssp             SSCCEEECTTSCEEEECSSSEEEE--EECCCS---CCSSBGGGTEEEEEECCC------CCCTTTTSCC---CSSCSSTT
T ss_pred             cEEEEEECCCCCEEEEEcCCceee--cccccc---eecCCCccEEEEEECCCC------CcceEEEEeC---CCceEeec
Confidence            899999999999999999999999  644443   446899999999999999      4555555553   3222333 


Q ss_pred             ccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeeccccc-----ceEEEEe
Q psy10867        117 SHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSL-----PVTHVTL  191 (343)
Q Consensus       117 ~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~v~~~~~  191 (343)
                      .|...|.+++|+|+|.+|++++.||.|++||...                        .+..+. |..     .+.+++|
T Consensus        83 ~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~------------------------~l~~l~-~~~~~~~~sv~svaf  137 (588)
T 2j04_A           83 QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK------------------------MLTNLD-SKGNLSSRTYHCFEW  137 (588)
T ss_dssp             SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE------------------------EEEECC-CSSCSTTTCEEEEEE
T ss_pred             CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc------------------------eeeecc-CCCccccccEEEEEE
Confidence            5688999999999999999999999999999654                        233334 444     5999999


Q ss_pred             ecCCCceEEEEeeCCCeEEEEecCCCce-------EEEee-----cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeeccc
Q psy10867        192 SKLGAKSRVASVSHDRTCKIFDLCTGED-------LLSLI-----LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVP  259 (343)
Q Consensus       192 ~~~~~~~~l~~~~~d~~i~~wd~~~~~~-------~~~~~-----~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~  259 (343)
                      +|+|  ++|++|+.||+|++||+.+++.       +.++.     |...|.+++|+|+|  +++++.|+.|++||+....
T Consensus       138 SPDG--~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~  213 (588)
T 2j04_A          138 NPIE--SSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASS  213 (588)
T ss_dssp             CSSS--SCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSS
T ss_pred             cCCC--CEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCc
Confidence            9999  8999999999999999998763       45543     45689999999999  8888899999999997644


Q ss_pred             ccccccccCCCCCCcc-ccccCcEEEEEEccCCCEEEEEeCCCcEEEEeccccee-eeecccCCceEEEEE--ccCCCee
Q psy10867        260 RTRDHHIQDSTSNPDF-IGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQC-LRTIQHKGPVLGAFL--GLLPPAI  335 (343)
Q Consensus       260 ~~~~~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~-~~~~~~~~~v~~~~~--sp~~~~l  335 (343)
                      ...        ....+ .+|...|.+++|+  ++.||+++ ++.|++||+.+++. ...+.|.+.+..++|  +|+++.|
T Consensus       214 ~~~--------~~~tL~~~h~~~V~svaFs--g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~L  282 (588)
T 2j04_A          214 HQP--------VSRMIQNASRRKITDLKIV--DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTIL  282 (588)
T ss_dssp             SCC--------CEEEEECCCSSCCCCEEEE--TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEE
T ss_pred             ccc--------ceeeecccccCcEEEEEEE--CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEE
Confidence            210        01234 3788899999999  68899887 69999999998887 444469999999999  9999999


Q ss_pred             eecc
Q psy10867        336 HDYD  339 (343)
Q Consensus       336 ~~~~  339 (343)
                      ++++
T Consensus       283 a~a~  286 (588)
T 2j04_A          283 LMSN  286 (588)
T ss_dssp             EECS
T ss_pred             EEEc
Confidence            8887

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=100.00  E-value=1.2e-36  Score=251.38  Aligned_cols=276  Identities=13%  Similarity=0.087  Sum_probs=199.4

Q ss_pred             EEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE--e
Q psy10867         19 VWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV--S   96 (343)
Q Consensus        19 iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~--~   96 (343)
                      ||++.+.+++..++.|.. .|.+++|+|||.++++|.++ .+++|++++++......  ...+..+++.++++.++.  +
T Consensus         3 i~s~~~~~~~~~~~~h~~-~V~~v~fs~dg~~la~g~~~-~~~iw~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~   78 (355)
T 3vu4_A            3 LGSMITRNPIVPENHVSN-PVTDYEFNQDQSCLILSTLK-SFEIYNVHPVAHIMSQE--MRHLSKVRMLHRTNYVAFVTG   78 (355)
T ss_dssp             ----------------CC-CCCEEEECTTSSEEEEECSS-EEEEEEETTEEEEEEEE--CSCCCEEEECTTSSEEEEECS
T ss_pred             cccccccCCccccccCCC-ceEEEEECCCCCEEEEEcCC-EEEEEecCCcceeeeee--cCCeEEEEEcCCCCEEEEEEC
Confidence            577777888888899999 99999999999999999885 58999998877654332  225778889888887753  5


Q ss_pred             cCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCcc-ceeeeeecCCCCCCCCccccccce
Q psy10867         97 IETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRL-ICKQTVAFGIPGSSGKGVTGLTEP  175 (343)
Q Consensus        97 ~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  175 (343)
                      .|+.|++||+.+++.+..+. +...|.+++|+++.  ++++ .|+.|++||+.+. +....+                  
T Consensus        79 ~d~~v~iWd~~~~~~~~~~~-~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~------------------  136 (355)
T 3vu4_A           79 VKEVVHIWDDVKKQDVSRIK-VDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDD------------------  136 (355)
T ss_dssp             STTEEEEEETTTTEEEEEEE-CSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCC------------------
T ss_pred             CccEEEEEECCCCcEEEEEE-CCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEe------------------
Confidence            67899999999999988886 66789999998764  4443 3789999999886 333221                  


Q ss_pred             eeeecccccceEEEEeecCCCceEEEE-eeCCCeEEEEecCCCc----------------eEEEee-cCCcEEEEEEcCC
Q psy10867        176 LHVKSQHSLPVTHVTLSKLGAKSRVAS-VSHDRTCKIFDLCTGE----------------DLLSLI-LDTRLTCVAFDGT  237 (343)
Q Consensus       176 ~~~~~~~~~~v~~~~~~~~~~~~~l~~-~~~d~~i~~wd~~~~~----------------~~~~~~-~~~~i~~~~~~~~  237 (343)
                          ..   +...+++++ .  .++++ |+.||.|++||+++++                .+..+. |...|.+++|+|+
T Consensus       137 ----~~---~~~~~~~s~-~--~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~  206 (355)
T 3vu4_A          137 ----IR---FGGVCEFSN-G--LLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRK  206 (355)
T ss_dssp             ----EE---EEEEEEEET-T--EEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTT
T ss_pred             ----cc---CCceEEEEc-c--EEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCC
Confidence                11   334556666 3  34444 7899999999999865                134444 7889999999999


Q ss_pred             CCEEEEEcCCCc-EEEEEeecccccccccccCCCCCCccc-c-ccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceee
Q psy10867        238 EDNIYMGTSEGV-IKSFCLRQVPRTRDHHIQDSTSNPDFI-G-HEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCL  314 (343)
Q Consensus       238 ~~~l~~~~~d~~-i~i~d~~~~~~~~~~~~~~~~~~~~~~-~-~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~  314 (343)
                      +++|++|+.|++ |++||+++...           +..+. + |...|++++|+|++++|++++.|+.|++||+..+...
T Consensus       207 g~~l~s~s~d~~~v~iwd~~~~~~-----------~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~  275 (355)
T 3vu4_A          207 SDMVATCSQDGTIIRVFKTEDGVL-----------VREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDN  275 (355)
T ss_dssp             SSEEEEEETTCSEEEEEETTTCCE-----------EEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCC
T ss_pred             CCEEEEEeCCCCEEEEEECCCCcE-----------EEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCc
Confidence            999999999998 99999987544           34455 4 8999999999999999999999999999999765311


Q ss_pred             --ee--------------------cc--cCCceEEEEEccCCCeeeecccC
Q psy10867        315 --RT--------------------IQ--HKGPVLGAFLGLLPPAIHDYDFT  341 (343)
Q Consensus       315 --~~--------------------~~--~~~~v~~~~~sp~~~~l~~~~~~  341 (343)
                        ..                    +.  ...+...++|+|++++|++++..
T Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~d  326 (355)
T 3vu4_A          276 KRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHT  326 (355)
T ss_dssp             CSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTT
T ss_pred             ccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCC
Confidence              11                    11  12234679999999999988643

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=100.00  E-value=7.3e-37  Score=252.27  Aligned_cols=246  Identities=13%  Similarity=0.166  Sum_probs=204.7

Q ss_pred             eecccCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCC----ceEEEecccCCCeEEEEEec--CCCEEEEecCCCeEE
Q psy10867         72 QLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQISSG----RLLATASSHYQPITIVKWSA--DSNFIVTGGEDGTIC  144 (343)
Q Consensus        72 ~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~----~~~~~~~~~~~~v~~~~~~~--~~~~l~s~~~dg~i~  144 (343)
                      ..+.+|.+.|++++|+|++++|++ +.|+.|++||+.++    +....+.+|...|.+++|+|  ++++|++++.||.|+
T Consensus         5 ~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~   84 (351)
T 3f3f_A            5 PFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVK   84 (351)
T ss_dssp             CEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEE
T ss_pred             ccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEE
Confidence            445689999999999999999997 67999999999876    46677789999999999999  699999999999999


Q ss_pred             EeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecC--CCceEEEEeeCCCeEEEEecCCCceEEE
Q psy10867        145 VWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKL--GAKSRVASVSHDRTCKIFDLCTGEDLLS  222 (343)
Q Consensus       145 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~l~~~~~d~~i~~wd~~~~~~~~~  222 (343)
                      +||++.+.....             ....+....+..|...|.+++|+|+  +  .++++++.|+.|++||+++++.+..
T Consensus        85 vwd~~~~~~~~~-------------~~~~~~~~~~~~~~~~v~~~~~~~~~~~--~~l~~~~~dg~v~iwd~~~~~~~~~  149 (351)
T 3f3f_A           85 LWEEDPDQEECS-------------GRRWNKLCTLNDSKGSLYSVKFAPAHLG--LKLACLGNDGILRLYDALEPSDLRS  149 (351)
T ss_dssp             EEEECTTSCTTS-------------SCSEEEEEEECCCSSCEEEEEECCGGGC--SEEEEEETTCEEEEEECSSTTCTTC
T ss_pred             EEecCCCccccc-------------ccCcceeeeecccCCceeEEEEcCCCCC--cEEEEecCCCcEEEecCCChHHhcc
Confidence            999987532110             0011256677789999999999999  7  8999999999999999998775433


Q ss_pred             e--------------ecCCcEEEEEEcCC---CCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEE
Q psy10867        223 L--------------ILDTRLTCVAFDGT---EDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSL  285 (343)
Q Consensus       223 ~--------------~~~~~i~~~~~~~~---~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  285 (343)
                      +              .+...+.+++|+|+   +.++++++.++.+.+|+........         +..+.+|...|+++
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~---------~~~~~~h~~~i~~~  220 (351)
T 3f3f_A          150 WTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHV---------AAKLPGHKSLIRSI  220 (351)
T ss_dssp             CEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEE---------EEECCCCCSCEEEE
T ss_pred             ccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceee---------eeecCCCCcceeEE
Confidence            2              24567999999997   8999999999999777765432211         34567899999999


Q ss_pred             EEccCC----CEEEEEeCCCcEEEEecccc----------------------------------------------eeee
Q psy10867        286 SCSITG----ITLLSSSADETLKIWHTISR----------------------------------------------QCLR  315 (343)
Q Consensus       286 ~~s~~~----~~l~s~~~dg~i~iwd~~~~----------------------------------------------~~~~  315 (343)
                      +|+|++    ++|++++.||.|++||+.++                                              +.+.
T Consensus       221 ~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (351)
T 3f3f_A          221 SWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLS  300 (351)
T ss_dssp             EECCCSSCSSEEEEEEETTSCEEEEEEEECC---------------------------------------CCSEEEEEEE
T ss_pred             EECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEE
Confidence            999998    89999999999999999875                                              5666


Q ss_pred             ecc-cCCceEEEEEccCCCeeeecccC
Q psy10867        316 TIQ-HKGPVLGAFLGLLPPAIHDYDFT  341 (343)
Q Consensus       316 ~~~-~~~~v~~~~~sp~~~~l~~~~~~  341 (343)
                      .+. |...|++++|+|++++|++++..
T Consensus       301 ~~~~h~~~v~~~~~s~~~~~l~s~~~d  327 (351)
T 3f3f_A          301 EHDDHNGEVWSVSWNLTGTILSSAGDD  327 (351)
T ss_dssp             EECTTSSCEEEEEECSSSCCEEEEETT
T ss_pred             EEecccccEEEEEEcCCCCEEEEecCC
Confidence            676 88999999999999999998754

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=4.6e-37  Score=252.98  Aligned_cols=257  Identities=11%  Similarity=0.069  Sum_probs=188.6

Q ss_pred             EeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEEecCCeEEEEEcc---------CCceEEE
Q psy10867         44 LLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQIS---------SGRLLAT  114 (343)
Q Consensus        44 ~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~---------~~~~~~~  114 (343)
                      +.+++.++++|+.||.|++||+.+++.+..+.  ...|.++.|+|+  ++.++.|+.|++|+..         +++.+..
T Consensus        44 ~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~--~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~  119 (343)
T 3lrv_A           44 MYYDKWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA--IISRGPCNRLLLLYPGNQITILDSKTNKVLRE  119 (343)
T ss_dssp             SSEEEEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS--EEEECSTTEEEEEETTTEEEEEETTTCCEEEE
T ss_pred             hcCCCCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc--eEEecCCCeEEEEEccCceEEeecCCcceeEE
Confidence            34567788888888999999988887765543  456777778877  4445778888888654         5554544


Q ss_pred             ec-ccCCCeEEEEEec--CCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEe
Q psy10867        115 AS-SHYQPITIVKWSA--DSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTL  191 (343)
Q Consensus       115 ~~-~~~~~v~~~~~~~--~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  191 (343)
                      +. +|.++|.+++|+|  +++++++++.||.|++||++++......                     ...+...+.+++|
T Consensus       120 ~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~---------------------~~~~~~~i~~~~~  178 (343)
T 3lrv_A          120 IEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVH---------------------SAKSDVEYSSGVL  178 (343)
T ss_dssp             EECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEE---------------------CCCSSCCCCEEEE
T ss_pred             eecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEE---------------------ecCCCCceEEEEE
Confidence            44 6778999999999  9999999999999999999987542211                     1235667999999


Q ss_pred             ecCCCceEEEEeeCCCeEEEEecCCCceE-EEee--cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccC
Q psy10867        192 SKLGAKSRVASVSHDRTCKIFDLCTGEDL-LSLI--LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQD  268 (343)
Q Consensus       192 ~~~~~~~~l~~~~~d~~i~~wd~~~~~~~-~~~~--~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~  268 (343)
                      +|++  .++++|+.||.|++||+++++.. ..+.  |..+|.+++|+|++.+|++++ ++.|++||++.......     
T Consensus       179 ~pdg--~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~-----  250 (343)
T 3lrv_A          179 HKDS--LLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLA-----  250 (343)
T ss_dssp             CTTS--CEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBS-----
T ss_pred             CCCC--CEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCccee-----
Confidence            9999  89999999999999999999877 6665  588999999999999999999 55999999988654332     


Q ss_pred             CCCCCccccccCcE--EEEEEccCCCEEEEEeC-CCcEEEEecccceeeeecccCCceEEEEEcc---CCCeeeecc
Q psy10867        269 STSNPDFIGHEKQV--TSLSCSITGITLLSSSA-DETLKIWHTISRQCLRTIQHKGPVLGAFLGL---LPPAIHDYD  339 (343)
Q Consensus       269 ~~~~~~~~~~~~~v--~~~~~s~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp---~~~~l~~~~  339 (343)
                         +..+..|...+  .+++|+|++++|++++. |+.|++|++.+.......   .++..+.|+|   +.+.|++++
T Consensus       251 ---~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~  321 (343)
T 3lrv_A          251 ---YPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTKNWTK---DEESALCLQSDTADFTDMDVVC  321 (343)
T ss_dssp             ---SCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTTTCSEEE---EEEEECCC----CCCCEEEEEE
T ss_pred             ---ecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEcccccceEe---cCceeEecCccccccceeEEEe
Confidence               11222233344  36999999999999998 999999998665432222   3444555555   444444443

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=100.00  E-value=8.8e-37  Score=253.73  Aligned_cols=268  Identities=11%  Similarity=0.106  Sum_probs=214.4

Q ss_pred             eEEEecCCCCeEEEEecCC-ceEE-EEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEE
Q psy10867          6 EVAFSYDGSGAISVWEPKG-GTLL-MSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISS   83 (343)
Q Consensus         6 ~~~~s~~~dg~i~iwd~~~-~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~   83 (343)
                      ..+++++.||.|++||+.+ ++.+ ..+.+|.. .|.+++|+|++.++++++.||.|++||+.+++... ...|...|.+
T Consensus        55 ~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~  132 (368)
T 3mmy_A           55 NFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTG-PVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQ-IAQHDAPVKT  132 (368)
T ss_dssp             EEEEEEETTSEEEEEEECTTSCEEEEEEEECSS-CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEE
T ss_pred             eEEEEECCCCcEEEEEcCCCCceeEEEeccccC-CEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCcee-eccccCceEE
Confidence            3445555589999999987 5555 78889999 99999999999999999988999999999988766 4579999999


Q ss_pred             EEE--CCCCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecC
Q psy10867         84 MQA--SPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFG  160 (343)
Q Consensus        84 ~~~--s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~  160 (343)
                      ++|  +|++++|++ +.|+.|++||+++++.+..+..+. .+.++.+.  ...+++++.++.+++|+++.......    
T Consensus       133 ~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~----  205 (368)
T 3mmy_A          133 IHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPE-RCYCADVI--YPMAVVATAERGLIVYQLENQPSEFR----  205 (368)
T ss_dssp             EEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSS-CEEEEEEE--TTEEEEEEGGGCEEEEECSSSCEEEE----
T ss_pred             EEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCC-CceEEEec--CCeeEEEeCCCcEEEEEeccccchhh----
Confidence            999  899988886 689999999999999888887665 56666665  45788889999999999987543221    


Q ss_pred             CCCCCCCccccccceeeeecccccceEEEEeecCCC--ceEEEEeeCCCeEEEEecCCC---ceEEEeecC-C-------
Q psy10867        161 IPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGA--KSRVASVSHDRTCKIFDLCTG---EDLLSLILD-T-------  227 (343)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~~l~~~~~d~~i~~wd~~~~---~~~~~~~~~-~-------  227 (343)
                                      .....+...+.++++.++..  ...+++++.|+.|++||++..   +....+... .       
T Consensus       206 ----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (368)
T 3mmy_A          206 ----------------RIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSA  269 (368)
T ss_dssp             ----------------ECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CC
T ss_pred             ----------------hccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccc
Confidence                            11123444556666665541  134999999999999999887   445555532 2       


Q ss_pred             -----cEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCc
Q psy10867        228 -----RLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADET  302 (343)
Q Consensus       228 -----~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~  302 (343)
                           .+.+++|+|++++|++++.||.|++||+.+...           +..+.+|...|++++|+|++++|++++.|+.
T Consensus       270 ~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~-----------~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~  338 (368)
T 3mmy_A          270 PQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTK-----------LKTSEQLDQPISACCFNHNGNIFAYASSYDW  338 (368)
T ss_dssp             CEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEE-----------EEECCCCSSCEEEEEECTTSSCEEEEECCCS
T ss_pred             cccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcE-----------EEEecCCCCCceEEEECCCCCeEEEEecccc
Confidence                 699999999999999999999999999987544           4456789999999999999999999999986


Q ss_pred             EEEEecc
Q psy10867        303 LKIWHTI  309 (343)
Q Consensus       303 i~iwd~~  309 (343)
                      .+.|++.
T Consensus       339 ~~~~~~~  345 (368)
T 3mmy_A          339 SKGHEFY  345 (368)
T ss_dssp             TTCGGGC
T ss_pred             ccccccc
Confidence            6666544

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=100.00  E-value=7.6e-36  Score=246.51  Aligned_cols=291  Identities=11%  Similarity=0.116  Sum_probs=212.4

Q ss_pred             cccceEEEecCC-------CCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEE-EEEcCCCeEEEEeCCCccccee
Q psy10867          2 SLLNEVAFSYDG-------SGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVL-GVEKGKPMIQAWPVNSQEKAQL   73 (343)
Q Consensus         2 ~~v~~~~~s~~~-------dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~i~iw~~~~~~~~~~   73 (343)
                      .+|.++.|++++       +..++|||+.+++.......+   .+..+++.+++.++ ++++.++.|++||..+++.+..
T Consensus        20 ~~V~~v~fs~dg~~la~g~~~~~~iw~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~   96 (355)
T 3vu4_A           20 NPVTDYEFNQDQSCLILSTLKSFEIYNVHPVAHIMSQEMR---HLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSR   96 (355)
T ss_dssp             CCCCEEEECTTSSEEEEECSSEEEEEEETTEEEEEEEECS---CCCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEEE
T ss_pred             CceEEEEECCCCCEEEEEcCCEEEEEecCCcceeeeeecC---CeEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEEE
Confidence            467888888887       356899999888776654433   46778888776555 5566678999999999988776


Q ss_pred             cccCCcceEEEEECCCCCEEEEecCCeEEEEEccCC-ceEEEecccCCCeEEEEEecCCCEEEE--ecCCCeEEEeecCc
Q psy10867         74 RLICPGRISSMQASPDAAYIAVSIETKLHMWQISSG-RLLATASSHYQPITIVKWSADSNFIVT--GGEDGTICVWQLSR  150 (343)
Q Consensus        74 ~~~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~s--~~~dg~i~iwd~~~  150 (343)
                      +. +...|.+++|+++.  ++++.++.|++||+.++ +.+..+..   +...+++++  .+++.  |+.||.|++||+++
T Consensus        97 ~~-~~~~v~~v~~~~~~--~~~~~~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~--~~la~~sg~~~g~v~iwd~~~  168 (355)
T 3vu4_A           97 IK-VDAPVKDLFLSREF--IVVSYGDVISVFKFGNPWKRITDDIR---FGGVCEFSN--GLLVYSNEFNLGQIHITKLQS  168 (355)
T ss_dssp             EE-CSSCEEEEEECSSE--EEEEETTEEEEEESSTTCCBSSCCEE---EEEEEEEET--TEEEEEESSCTTCEEEEECCC
T ss_pred             EE-CCCceEEEEEcCCE--EEEEEcCEEEEEECCCCceeeEEecc---CCceEEEEc--cEEEEeCCCcCcEEEEEECCC
Confidence            64 67799999998764  55556899999999988 66555544   445566776  55655  68999999999987


Q ss_pred             cceeeeeecCCCCCCCCccccccce-eeeecccccceEEEEeecCCCceEEEEeeCCCe-EEEEecCCCceEEEee---c
Q psy10867        151 LICKQTVAFGIPGSSGKGVTGLTEP-LHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRT-CKIFDLCTGEDLLSLI---L  225 (343)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~-i~~wd~~~~~~~~~~~---~  225 (343)
                      +.........       .......+ ...+.+|...|.+++|+|++  .+|++++.|++ |++||+++++.+..+.   |
T Consensus       169 ~~~~~~~~~~-------~~~~~~~p~~~~~~~h~~~v~~~~~s~~g--~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h  239 (355)
T 3vu4_A          169 SGSATTQDQG-------VQQKAILGKGVLIKAHTNPIKMVRLNRKS--DMVATCSQDGTIIRVFKTEDGVLVREFRRGLD  239 (355)
T ss_dssp             -------------------------CCEEECCCSSCEEEEEECTTS--SEEEEEETTCSEEEEEETTTCCEEEEEECTTC
T ss_pred             CCcccccccc-------ccccccCcccEEEEccCCceEEEEECCCC--CEEEEEeCCCCEEEEEECCCCcEEEEEEcCCC
Confidence            5421110000       00000113 67788999999999999999  89999999998 9999999999999997   7


Q ss_pred             CCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccC---------CCCCCc--c-ccccCcEEEEEEccCCCE
Q psy10867        226 DTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQD---------STSNPD--F-IGHEKQVTSLSCSITGIT  293 (343)
Q Consensus       226 ~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~---------~~~~~~--~-~~~~~~v~~~~~s~~~~~  293 (343)
                      ...|.+++|+|++++|++++.|+.|++||++.........+..         ......  + ..+......++|++++++
T Consensus       240 ~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~  319 (355)
T 3vu4_A          240 RADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSL  319 (355)
T ss_dssp             CSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEE
T ss_pred             CCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCE
Confidence            8899999999999999999999999999997653222111100         000000  0 111223467899999999


Q ss_pred             EEEEeCCCcEEEEecccce
Q psy10867        294 LLSSSADETLKIWHTISRQ  312 (343)
Q Consensus       294 l~s~~~dg~i~iwd~~~~~  312 (343)
                      |++++.||.+++|++..++
T Consensus       320 l~~~~~dg~~~~~~~~~~~  338 (355)
T 3vu4_A          320 VVVWPHTRMIETFKVVFDD  338 (355)
T ss_dssp             EEEETTTTEEEEEEEEEET
T ss_pred             EEEEeCCCeEEEEEEEcCC
Confidence            9999999999999987644

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=100.00  E-value=1.5e-35  Score=251.94  Aligned_cols=268  Identities=10%  Similarity=0.057  Sum_probs=224.9

Q ss_pred             ceEEEecCCCCeEEEEecCCceEEE-----EEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCc
Q psy10867          5 NEVAFSYDGSGAISVWEPKGGTLLM-----SYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPG   79 (343)
Q Consensus         5 ~~~~~s~~~dg~i~iwd~~~~~~~~-----~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~   79 (343)
                      ..++++++.++.|++||+.+++.+.     .+.+|.. .|.+++|+|++.+++++..++.|++||+.+++.+..+..|..
T Consensus       134 ~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~  212 (433)
T 3bws_A          134 TRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLG-FVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGK  212 (433)
T ss_dssp             SEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCC-EEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSS
T ss_pred             CeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCC-ceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCC
Confidence            3466666778999999999998887     4557887 999999999999999999999999999999888877778889


Q ss_pred             ceEEEEECCCCCEEE-Ee-cCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEec--------CCCeEEEeecC
Q psy10867         80 RISSMQASPDAAYIA-VS-IETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGG--------EDGTICVWQLS  149 (343)
Q Consensus        80 ~v~~~~~s~~~~~l~-~~-~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~--------~dg~i~iwd~~  149 (343)
                      .+.+++|+|++++++ ++ .++.|++||+.+++.+..+..+ ..+.+++|+|+++.+++++        .||.|++||+.
T Consensus       213 ~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~  291 (433)
T 3bws_A          213 WSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKI-GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMD  291 (433)
T ss_dssp             SEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCC-SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETT
T ss_pred             CeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCC-CCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECC
Confidence            999999999998775 44 6899999999999888887754 4589999999999999887        58899999998


Q ss_pred             ccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCCcE
Q psy10867        150 RLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRL  229 (343)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i  229 (343)
                      +++....                       ..+...+.+++|+|+++ .++++++.++.|++||+++++....+.+...+
T Consensus       292 ~~~~~~~-----------------------~~~~~~~~~~~~~~~g~-~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~  347 (433)
T 3bws_A          292 KEKLIDT-----------------------IGPPGNKRHIVSGNTEN-KIYVSDMCCSKIEVYDLKEKKVQKSIPVFDKP  347 (433)
T ss_dssp             TTEEEEE-----------------------EEEEECEEEEEECSSTT-EEEEEETTTTEEEEEETTTTEEEEEEECSSSE
T ss_pred             CCcEEee-----------------------ccCCCCcceEEECCCCC-EEEEEecCCCEEEEEECCCCcEEEEecCCCCC
Confidence            8643322                       23556888999999984 46677789999999999999998888888899


Q ss_pred             EEEEEcCCCCEEEEEcC---------------CCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEE
Q psy10867        230 TCVAFDGTEDNIYMGTS---------------EGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITL  294 (343)
Q Consensus       230 ~~~~~~~~~~~l~~~~~---------------d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l  294 (343)
                      .+++|+|+++++++++.               ||.|++||+.+.+...           .+.. ...+.+++|+|++++|
T Consensus       348 ~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~-----------~~~~-~~~~~~~~~s~dg~~l  415 (433)
T 3bws_A          348 NTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKE-----------FWEA-GNQPTGLDVSPDNRYL  415 (433)
T ss_dssp             EEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEE-----------EEEC-SSSEEEEEECTTSCEE
T ss_pred             CeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEE-----------EecC-CCCCceEEEcCCCCEE
Confidence            99999999999988876               5799999987754322           2333 4578999999999999


Q ss_pred             EEEeC-CCcEEEEeccc
Q psy10867        295 LSSSA-DETLKIWHTIS  310 (343)
Q Consensus       295 ~s~~~-dg~i~iwd~~~  310 (343)
                      ++++. |+.|++|++..
T Consensus       416 ~~~~~~d~~i~v~~~~~  432 (433)
T 3bws_A          416 VISDFLDHQIRVYRRDG  432 (433)
T ss_dssp             EEEETTTTEEEEEEETT
T ss_pred             EEEECCCCeEEEEEecC
Confidence            88775 99999999863

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=100.00  E-value=7.4e-36  Score=253.13  Aligned_cols=241  Identities=17%  Similarity=0.287  Sum_probs=200.7

Q ss_pred             cccCCcceEEEEECCC-CCEEEE-ecCCeEEEEEccC----------CceEEEecccCCCeEEEEEecCCC-EEEEecCC
Q psy10867         74 RLICPGRISSMQASPD-AAYIAV-SIETKLHMWQISS----------GRLLATASSHYQPITIVKWSADSN-FIVTGGED  140 (343)
Q Consensus        74 ~~~~~~~v~~~~~s~~-~~~l~~-~~d~~i~v~~~~~----------~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~d  140 (343)
                      ...|.+.|++++|+|+ +.+|++ +.+|.|++|++.+          ...+..+.+|...|.+++|+|++. +|++|+.|
T Consensus       124 ~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d  203 (430)
T 2xyi_A          124 KINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDD  203 (430)
T ss_dssp             EEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTT
T ss_pred             EEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCC
Confidence            4578999999999997 667776 5789999999987          567778889999999999999988 99999999


Q ss_pred             CeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCC---
Q psy10867        141 GTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTG---  217 (343)
Q Consensus       141 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~---  217 (343)
                      |.|++||+.........               ..+...+..|...|.+++|+|++. .++++++.|+.|++||++++   
T Consensus       204 g~i~vwd~~~~~~~~~~---------------~~~~~~~~~h~~~v~~v~~~p~~~-~~l~s~~~dg~i~i~d~~~~~~~  267 (430)
T 2xyi_A          204 HTICLWDINATPKEHRV---------------IDAKNIFTGHTAVVEDVAWHLLHE-SLFGSVADDQKLMIWDTRNNNTS  267 (430)
T ss_dssp             SCEEEEETTSCCBGGGE---------------EECSEEECCCSSCEEEEEECSSCT-TEEEEEETTSEEEEEETTCSCSS
T ss_pred             CeEEEEeCCCCCCCCce---------------eccceeecCCCCCEeeeEEeCCCC-CEEEEEeCCCeEEEEECCCCCCC
Confidence            99999999874221100               013456678999999999999543 79999999999999999987   


Q ss_pred             ceEEEee-cCCcEEEEEEcCCCC-EEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCC-EE
Q psy10867        218 EDLLSLI-LDTRLTCVAFDGTED-NIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGI-TL  294 (343)
Q Consensus       218 ~~~~~~~-~~~~i~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l  294 (343)
                      +.+..+. +...+.+++|+|+++ ++++|+.||.|++||++....          ++..+..|...|++++|+|+++ +|
T Consensus       268 ~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~----------~~~~~~~h~~~v~~i~~sp~~~~~l  337 (430)
T 2xyi_A          268 KPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKL----------KLHSFESHKDEIFQVQWSPHNETIL  337 (430)
T ss_dssp             SCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTS----------CSEEEECCSSCEEEEEECSSCTTEE
T ss_pred             cceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCC----------CeEEeecCCCCEEEEEECCCCCCEE
Confidence            4555554 788999999999987 688999999999999986432          2556778999999999999985 68


Q ss_pred             EEEeCCCcEEEEeccc--------------ceeeeecc-cCCceEEEEEccCCC-eeeeccc
Q psy10867        295 LSSSADETLKIWHTIS--------------RQCLRTIQ-HKGPVLGAFLGLLPP-AIHDYDF  340 (343)
Q Consensus       295 ~s~~~dg~i~iwd~~~--------------~~~~~~~~-~~~~v~~~~~sp~~~-~l~~~~~  340 (343)
                      ++++.|+.|++||+..              .+.+..+. |...|++++|+|+++ +|++++.
T Consensus       338 ~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~  399 (430)
T 2xyi_A          338 ASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSE  399 (430)
T ss_dssp             EEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEET
T ss_pred             EEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEEC
Confidence            9999999999999987              24555665 888999999999999 6777664

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=7.1e-36  Score=269.51  Aligned_cols=241  Identities=16%  Similarity=0.203  Sum_probs=201.6

Q ss_pred             eecccCCcceEEEEECCCCCEEEE-ecCCeEEEEEcc--CCceEEEecccCCCeEEEEEecC--CCEEEEecCCCeEEEe
Q psy10867         72 QLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQIS--SGRLLATASSHYQPITIVKWSAD--SNFIVTGGEDGTICVW  146 (343)
Q Consensus        72 ~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~--~~~~~~~~~~~~~~v~~~~~~~~--~~~l~s~~~dg~i~iw  146 (343)
                      ..+.+|.+.|++++|+|++++|++ +.||.|++||+.  +++.+..+.+|.++|.+++|+|+  +++|++|+.||.|++|
T Consensus         3 ~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vw   82 (753)
T 3jro_A            3 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIW   82 (753)
T ss_dssp             -----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEE
T ss_pred             eecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEE
Confidence            456689999999999999998887 689999999998  55677888999999999999987  9999999999999999


Q ss_pred             ecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecC--CCceEEEEeeCCCeEEEEecCCCce---EE
Q psy10867        147 QLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKL--GAKSRVASVSHDRTCKIFDLCTGED---LL  221 (343)
Q Consensus       147 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~l~~~~~d~~i~~wd~~~~~~---~~  221 (343)
                      |+.++..                    .....+..|...|.+++|+|+  +  .++++++.||.|++||++++..   ..
T Consensus        83 d~~~~~~--------------------~~~~~~~~h~~~V~~v~~sp~~~~--~~l~sgs~dg~I~vwdl~~~~~~~~~~  140 (753)
T 3jro_A           83 KEENGRW--------------------SQIAVHAVHSASVNSVQWAPHEYG--PLLLVASSDGKVSVVEFKENGTTSPII  140 (753)
T ss_dssp             EEETTEE--------------------EEEEEECCCSSCEEEEEECCGGGC--SEEEEEETTSEEEEEECCSSSCCCCEE
T ss_pred             ECCCCcc--------------------cccccccCCCCCeEEEEECCCCCC--CEEEEEeCCCcEEEEEeecCCCcceeE
Confidence            9987632                    145566789999999999999  7  8999999999999999988732   22


Q ss_pred             EeecCCcEEEEEEcC-------------CCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEc
Q psy10867        222 SLILDTRLTCVAFDG-------------TEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCS  288 (343)
Q Consensus       222 ~~~~~~~i~~~~~~~-------------~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s  288 (343)
                      ...+...+.+++|+|             +++++++|+.||.|++||++........       ...+.+|...|++++|+
T Consensus       141 ~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~-------~~~~~~h~~~V~~l~~s  213 (753)
T 3jro_A          141 IDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVL-------ESTLEGHSDWVRDVAWS  213 (753)
T ss_dssp             EECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEE-------EEEECCCSSCEEEEEEC
T ss_pred             eecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCccccee-------eeeecCCCCcEEEEEec
Confidence            234788999999999             5899999999999999999875432211       44677899999999999


Q ss_pred             cC---CCEEEEEeCCCcEEEEecccce-----eeeecc-cCCceEEEEEccCCCeeeecccC
Q psy10867        289 IT---GITLLSSSADETLKIWHTISRQ-----CLRTIQ-HKGPVLGAFLGLLPPAIHDYDFT  341 (343)
Q Consensus       289 ~~---~~~l~s~~~dg~i~iwd~~~~~-----~~~~~~-~~~~v~~~~~sp~~~~l~~~~~~  341 (343)
                      |+   +++|++++.||.|++||+.+++     .+.... +.+.|++++|+|++++|++++..
T Consensus       214 p~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~D  275 (753)
T 3jro_A          214 PTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGD  275 (753)
T ss_dssp             CCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSS
T ss_pred             cCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCC
Confidence            99   8999999999999999998864     222222 78899999999999999998754

>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A

Probab=100.00  E-value=2.6e-35  Score=233.11  Aligned_cols=260  Identities=13%  Similarity=0.090  Sum_probs=187.0

Q ss_pred             EEecCCCCeEEEEecCCc---eEEEEEecCCCCcceEEEEeCCc-eEEEEEcCCCeE-EEEeC--CCc----ccceeccc
Q psy10867          8 AFSYDGSGAISVWEPKGG---TLLMSYKGASVLSPHSMCLLGND-YVLGVEKGKPMI-QAWPV--NSQ----EKAQLRLI   76 (343)
Q Consensus         8 ~~s~~~dg~i~iwd~~~~---~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~i-~iw~~--~~~----~~~~~~~~   76 (343)
                      ++..-.+..|++|+..++   +.++++++|+. +|..+.+.||. .++..+-.+=.+ .++-+  ...    .......+
T Consensus        56 ~~~~~~~~~v~lw~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~spd~~~~~~~l~s~g  134 (356)
T 2w18_A           56 CIITACEDVVSLWKALDAWQWEKLYTWHFAEV-PVLQIVPVPDVYNLVCVALGNLEIREIRALFCSSDDESEKQVLLKSG  134 (356)
T ss_dssp             EEEEEESSEEEEEEESSSSBEEEEEEEECCSS-CEEEECCCTTCCSCEEEEECSSSEEEEEEECC------CCEEEEEEE
T ss_pred             EEEEeccceEEEcccCCCccceeeEEEeccCc-eeEEEEEcCcccceeeeeeccccccceEEEEECCCccccccEEEeCC
Confidence            444444678999999998   89999999998 99999999964 222222221111 11111  111    11111123


Q ss_pred             CCcceEEEEECCCCCEEEEe---cCCeEEEEEc-cCCceEEEecccCCCeEEEEEec---CCCEEEEecCCCeEEEeecC
Q psy10867         77 CPGRISSMQASPDAAYIAVS---IETKLHMWQI-SSGRLLATASSHYQPITIVKWSA---DSNFIVTGGEDGTICVWQLS  149 (343)
Q Consensus        77 ~~~~v~~~~~s~~~~~l~~~---~d~~i~v~~~-~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~s~~~dg~i~iwd~~  149 (343)
                      |...|..+   ++++++.++   .|+.|++|++ .+|+.+..+.+|...+..++|+|   ++..|++++.|++|+|||+.
T Consensus       135 ~~~~v~~l---~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~  211 (356)
T 2w18_A          135 NIKAVLGL---TKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLK  211 (356)
T ss_dssp             EEEEEEEE---TTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETT
T ss_pred             CeEEEEec---CCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECC
Confidence            44445554   577777774   4999999999 55888888889999999999999   77999999999999999999


Q ss_pred             ccceeeeeecCCCCCCCCccccccceeeeeccc---ccceEEEEeecCCCceEE------------EEeeCCCeEEEEec
Q psy10867        150 RLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQH---SLPVTHVTLSKLGAKSRV------------ASVSHDRTCKIFDL  214 (343)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~l------------~~~~~d~~i~~wd~  214 (343)
                      +++...++                      .+|   ...+.+++|+|++  .++            ++|+.|++|++||.
T Consensus       212 TGk~l~tL----------------------~g~~~~v~~v~~vafSpdG--~~lvs~s~~~~~w~laSGs~D~tIklWd~  267 (356)
T 2w18_A          212 TGQLLKKM----------------------HIDDSYQASVCHKAYSEMG--LLFIVLSHPCAKESESLRSPVFQLIVINP  267 (356)
T ss_dssp             TCCEEEEE----------------------ECCC---CCCEEEEEEETT--EEEEEEC------------CCEEEEEEET
T ss_pred             CCcEEEEE----------------------cCCCcceeeeEEEEECCCC--CEEEEeccCCCcceeeccCCCcEEEEEEC
Confidence            98655443                      333   3467788999998  665            66889999999999


Q ss_pred             CCCceEEEee------cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEE-EEEE
Q psy10867        215 CTGEDLLSLI------LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVT-SLSC  287 (343)
Q Consensus       215 ~~~~~~~~~~------~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~  287 (343)
                      .+++.+..+.      +...+.+..++  +.++++++.|++|+|||+.+.+.           +.++.+|...+. .++|
T Consensus       268 ~tgk~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTIkIWDl~tGk~-----------l~tL~gH~~~vvs~vaf  334 (356)
T 2w18_A          268 KTTLSVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSGTIAIWDLLLGQC-----------TALLPPVSDQHWSFVKW  334 (356)
T ss_dssp             TTTEEEEEEEECCCTTCCCCEEEEEEE--TTEEEEEETTSCEEEEETTTCSE-----------EEEECCC--CCCCEEEE
T ss_pred             CCCEEEEEEEeeccCCCcceeEccccC--CCEEEEEcCCCcEEEEECCCCcE-----------EEEecCCCCCeEEEEEE
Confidence            9998876552      22233333333  77899999999999999987544           556778877655 5899


Q ss_pred             ccCCCEEEEEeCCCcEEEEec
Q psy10867        288 SITGITLLSSSADETLKIWHT  308 (343)
Q Consensus       288 s~~~~~l~s~~~dg~i~iwd~  308 (343)
                      +|||++|++|+.|++|+|||+
T Consensus       335 SPDG~~LaSGS~D~TIklWd~  355 (356)
T 2w18_A          335 SGTDSHLLAGQKDGNIFVYHY  355 (356)
T ss_dssp             CSSSSEEEEECTTSCEEEEEE
T ss_pred             CCCCCEEEEEECCCcEEEecC
Confidence            999999999999999999996

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=100.00  E-value=9.2e-36  Score=249.41  Aligned_cols=278  Identities=10%  Similarity=0.067  Sum_probs=191.3

Q ss_pred             cceEEEEe---CC-ceEEEEEcCCCeEEEEeCCCcccc---------eecccCCcceEEEEEC-----------------
Q psy10867         38 SPHSMCLL---GN-DYVLGVEKGKPMIQAWPVNSQEKA---------QLRLICPGRISSMQAS-----------------   87 (343)
Q Consensus        38 ~v~~~~~~---~~-~~~~~~~~~~~~i~iw~~~~~~~~---------~~~~~~~~~v~~~~~s-----------------   87 (343)
                      ...++.|.   |+ ..++++|.+ +.|.+|+.......         .....+..++..+.|+                 
T Consensus        17 ~p~~~~w~~~~~~~~~l~a~g~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   95 (393)
T 4gq1_A           17 RPYTTTWCSQSPSCSNLLAIGHD-TGITIYCASEEQTPGSTGLTLQELFTIQTGLPTLHLSFSSSCSYSENLHDGDGNVN   95 (393)
T ss_dssp             CEEEEEECTTSGGGTTEEEEEES-SEEEEEEEEECCSSSCCSEEEEEEEEEECSSCEEEEEECTTCEEECC---------
T ss_pred             CCeEEEEeCCCCCCCCEEEEECC-CCEEEEECCCCCcccccccceeeeEEEecCCCeeeEeecCCccccccccCCCccee
Confidence            55667774   22 367777766 78999975322110         0011233344444443                 


Q ss_pred             ---CCCCEEEE-ecCCeEEEEEccCCceE-----EEecccCCCeEEEEEec--------CCCEEEEecCCCeEEEeecCc
Q psy10867         88 ---PDAAYIAV-SIETKLHMWQISSGRLL-----ATASSHYQPITIVKWSA--------DSNFIVTGGEDGTICVWQLSR  150 (343)
Q Consensus        88 ---~~~~~l~~-~~d~~i~v~~~~~~~~~-----~~~~~~~~~v~~~~~~~--------~~~~l~s~~~dg~i~iwd~~~  150 (343)
                         +++.+|++ +.|++|++||+++++..     ..+.+|.+.|.+++|+|        ++++|++++.|++|+|||+++
T Consensus        96 ~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~  175 (393)
T 4gq1_A           96 SSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTD  175 (393)
T ss_dssp             -CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEET
T ss_pred             ecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCC
Confidence               34557776 68999999999988653     34678999999999998        789999999999999999977


Q ss_pred             cceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEe-------
Q psy10867        151 LICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSL-------  223 (343)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~-------  223 (343)
                      ..                      +...+..|..++.+++|+|++. .+|++++.|++|++||+++++.....       
T Consensus       176 ~~----------------------~~~~~~~~~~~v~~v~~~p~~~-~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~  232 (393)
T 4gq1_A          176 EG----------------------PILAGYPLSSPGISVQFRPSNP-NQLIVGERNGNIRIFDWTLNLSAEENSQTELVK  232 (393)
T ss_dssp             TE----------------------EEEEEEECSSCEEEEEEETTEE-EEEEEEETTSEEEEEETTCCC----------CS
T ss_pred             Cc----------------------eeeeecCCCCCcEEEEECCCCC-ceEEecCCCCEEEEEECCCCcccccccccCCcc
Confidence            53                      4445567889999999999873 58999999999999999987654322       


Q ss_pred             -------------------ecCCcEEEEEEc-CCCCEEEEEcCCCcEEEEEeecccccccccccCCC--------CCCcc
Q psy10867        224 -------------------ILDTRLTCVAFD-GTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDST--------SNPDF  275 (343)
Q Consensus       224 -------------------~~~~~i~~~~~~-~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~--------~~~~~  275 (343)
                                         .+...+.++.|+ |+++.+++++.|+.+++||+........+......        .....
T Consensus       233 ~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  312 (393)
T 4gq1_A          233 NPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGI  312 (393)
T ss_dssp             CCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEE
T ss_pred             cceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccc
Confidence                               134457788886 79999999999999999999875543322110000        00011


Q ss_pred             ccccCcEEEEEEcc--CCCEEEEEeCCCcEEEEecccceeeeecc-cCCceEEEEEccCCCeeeeccc
Q psy10867        276 IGHEKQVTSLSCSI--TGITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVLGAFLGLLPPAIHDYDF  340 (343)
Q Consensus       276 ~~~~~~v~~~~~s~--~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~  340 (343)
                      ..+...+ ...++|  ++.++++|+.||.|++||+.+++.+..+. |..+|++++|+|||++|++++-
T Consensus       313 ~~~~~~~-~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~  379 (393)
T 4gq1_A          313 SLFPSLL-GACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATE  379 (393)
T ss_dssp             CSSCCSS-CCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEES
T ss_pred             cccCcce-eEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeC
Confidence            1112222 233444  34467788999999999999998887766 8899999999999999998863

>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A

Probab=100.00  E-value=1.2e-34  Score=243.93  Aligned_cols=281  Identities=15%  Similarity=0.048  Sum_probs=220.9

Q ss_pred             CCCC----eEEEEec--CCceEE--EEEecCCCCcceEEEEeC---------------CceEEEEEcC--C---CeEEEE
Q psy10867         12 DGSG----AISVWEP--KGGTLL--MSYKGASVLSPHSMCLLG---------------NDYVLGVEKG--K---PMIQAW   63 (343)
Q Consensus        12 ~~dg----~i~iwd~--~~~~~~--~~~~~~~~~~v~~~~~~~---------------~~~~~~~~~~--~---~~i~iw   63 (343)
                      .++|    .|++||+  .+++.+  ..+.+|.. .+..+++++               +.++++++.+  +   +.|++|
T Consensus        86 ~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~  164 (415)
T 2hqs_A           86 NPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQ-WLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVS  164 (415)
T ss_dssp             CTTSCEEEEEEEEECSSSTTCEEEEEEEEECGG-GHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEE
T ss_pred             CCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChh-HHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEE
Confidence            4567    8999999  899887  55888887 788887765               4566665554  2   699999


Q ss_pred             eCCCcccceecccCCcceEEEEECCCCCEEEE-ecC---CeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEE-Eec
Q psy10867         64 PVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SIE---TKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIV-TGG  138 (343)
Q Consensus        64 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d---~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-s~~  138 (343)
                      |++.. ..+.+..|...+.+++|+|||+.|+. +.+   ..|++||+.+++.. .+..|.+.+.+++|+||++.|+ +++
T Consensus       165 d~~g~-~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~~la~~~~  242 (415)
T 2hqs_A          165 DYDGY-NQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGSKLAFALS  242 (415)
T ss_dssp             ETTSC-SCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSSEEEEEEC
T ss_pred             cCCCC-CCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcCCCCEEEEEEe
Confidence            99854 45566688899999999999999986 455   39999999998875 4667888999999999999887 666


Q ss_pred             CCCe--EEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeC-CC--eEEEEe
Q psy10867        139 EDGT--ICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSH-DR--TCKIFD  213 (343)
Q Consensus       139 ~dg~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~-d~--~i~~wd  213 (343)
                      .++.  |++||+.++.                       ...+..|...+.+++|+|++  ++|++++. ++  .|++||
T Consensus       243 ~~g~~~i~~~d~~~~~-----------------------~~~l~~~~~~~~~~~~spdg--~~l~~~s~~~g~~~i~~~d  297 (415)
T 2hqs_A          243 KTGSLNLYVMDLASGQ-----------------------IRQVTDGRSNNTEPTWFPDS--QNLAFTSDQAGRPQVYKVN  297 (415)
T ss_dssp             TTSSCEEEEEETTTCC-----------------------EEECCCCSSCEEEEEECTTS--SEEEEEECTTSSCEEEEEE
T ss_pred             cCCCceEEEEECCCCC-----------------------EEeCcCCCCcccceEECCCC--CEEEEEECCCCCcEEEEEE
Confidence            6554  9999998763                       34455678889999999999  67777765 44  688889


Q ss_pred             cCCCceEEEeecCCcEEEEEEcCCCCEEEEEcCC---CcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccC
Q psy10867        214 LCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSE---GVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSIT  290 (343)
Q Consensus       214 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d---~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~  290 (343)
                      +.+++......+...+.+++|+|+|++|++++.+   ..|++||+.+...            ..+..+. .+.+++|+|+
T Consensus       298 ~~~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~------------~~l~~~~-~~~~~~~spd  364 (415)
T 2hqs_A          298 INGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV------------QVLSSTF-LDETPSLAPN  364 (415)
T ss_dssp             TTSSCCEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE------------EECCCSS-SCEEEEECTT
T ss_pred             CCCCCEEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCE------------EEecCCC-CcCCeEEcCC
Confidence            9888754433456778999999999999988764   5899999876432            1233343 7899999999


Q ss_pred             CCEEEEEeCCC---cEEEEecccceeeeecc-cCCceEEEEEccCCCe
Q psy10867        291 GITLLSSSADE---TLKIWHTISRQCLRTIQ-HKGPVLGAFLGLLPPA  334 (343)
Q Consensus       291 ~~~l~s~~~dg---~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~  334 (343)
                      |++|++++.++   .|++||+. ++....+. +.+.|.+++|+|.-.+
T Consensus       365 g~~l~~~s~~~~~~~l~~~d~~-g~~~~~l~~~~~~v~~~~~~~~~~~  411 (415)
T 2hqs_A          365 GTMVIYSSSQGMGSVLNLVSTD-GRFKARLPATDGQVKFPAWSPYLHH  411 (415)
T ss_dssp             SSEEEEEEEETTEEEEEEEETT-SCCEEECCCSSSEEEEEEECCCCCC
T ss_pred             CCEEEEEEcCCCccEEEEEECC-CCcEEEeeCCCCCCcCCcccccccc
Confidence            99999888877   79999986 55566666 8899999999997654

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=100.00  E-value=7.7e-36  Score=249.87  Aligned_cols=252  Identities=10%  Similarity=0.051  Sum_probs=176.3

Q ss_pred             EeCCceEEEEEcCCCeEEEEeCCCcccc-----eecccCCcceEEEEECC--------CCCEEEE-ecCCeEEEEEccCC
Q psy10867         44 LLGNDYVLGVEKGKPMIQAWPVNSQEKA-----QLRLICPGRISSMQASP--------DAAYIAV-SIETKLHMWQISSG  109 (343)
Q Consensus        44 ~~~~~~~~~~~~~~~~i~iw~~~~~~~~-----~~~~~~~~~v~~~~~s~--------~~~~l~~-~~d~~i~v~~~~~~  109 (343)
                      +++++.++++++.|++|+|||..+++..     ..+.+|.+.|++++|+|        |+++||+ +.|++|+|||+.++
T Consensus        97 ~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~  176 (393)
T 4gq1_A           97 SPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDE  176 (393)
T ss_dssp             CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETT
T ss_pred             cCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCC
Confidence            3445678999999999999999887643     34568999999999998        7889997 78999999999999


Q ss_pred             ceEEEecccCCCeEEEEEecCC-CEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCcc---ccccceeeeecccccc
Q psy10867        110 RLLATASSHYQPITIVKWSADS-NFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGV---TGLTEPLHVKSQHSLP  185 (343)
Q Consensus       110 ~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~  185 (343)
                      .++..+..|..+|.+++|+|++ .+|++++.||.|++||++++..................   ...........+|...
T Consensus       177 ~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~  256 (393)
T 4gq1_A          177 GPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASS  256 (393)
T ss_dssp             EEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSS
T ss_pred             ceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeeccccccc
Confidence            8888888899999999999977 48999999999999999987654433211111100000   0011122234578889


Q ss_pred             eEEEEee-cCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEE------------------EEEEcC--CCCEEEE
Q psy10867        186 VTHVTLS-KLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLT------------------CVAFDG--TEDNIYM  243 (343)
Q Consensus       186 v~~~~~~-~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~------------------~~~~~~--~~~~l~~  243 (343)
                      +.++.|+ |++  ..+++++.|+++++||+.+++....+. +...+.                  ...++|  ++.++++
T Consensus       257 v~~v~~~~~dg--~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s  334 (393)
T 4gq1_A          257 LANVRWIGSDG--SGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATA  334 (393)
T ss_dssp             CSEEEEETTTT--CEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEE
T ss_pred             ceeeeeecCCC--CEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEE
Confidence            9999997 677  799999999999999998776554443 221222                  223443  3346677


Q ss_pred             EcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecc
Q psy10867        244 GTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTI  309 (343)
Q Consensus       244 ~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~  309 (343)
                      |+.||.|++||+.....           ...+.+|..+|.+++|+|||++||+++.+| +.+|.+.
T Consensus       335 gs~Dg~V~lwd~~~~~~-----------~~~~~~~~~~V~svafspdG~~LA~as~~G-v~lvrL~  388 (393)
T 4gq1_A          335 HSQHGLIQLINTYEKDS-----------NSIPIQLGMPIVDFCWHQDGSHLAIATEGS-VLLTRLM  388 (393)
T ss_dssp             ETTTTEEEEEETTCTTC-----------CEEEEECSSCEEEEEECTTSSEEEEEESSE-EEEEEEG
T ss_pred             ECCCCEEEEEECCCCcE-----------EEEecCCCCcEEEEEEcCCCCEEEEEeCCC-eEEEEEe
Confidence            88999999999987543           445667889999999999999999998776 6666654

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=100.00  E-value=1.1e-33  Score=237.18  Aligned_cols=252  Identities=12%  Similarity=0.049  Sum_probs=209.2

Q ss_pred             ceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEE-E-ecCCeEEEEEccCCceEEEecccCCCeEEE
Q psy10867         48 DYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIA-V-SIETKLHMWQISSGRLLATASSHYQPITIV  125 (343)
Q Consensus        48 ~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~  125 (343)
                      +.++++++.++.|++||+.+++....+..| ..+.+++|+|++++++ + +.++.|++||+.+++.+..+..+. .+.++
T Consensus         2 ~~l~vs~~~d~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~   79 (391)
T 1l0q_A            2 TFAYIANSESDNISVIDVTSNKVTATIPVG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGV   79 (391)
T ss_dssp             EEEEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEE
T ss_pred             CEEEEEcCCCCEEEEEECCCCeEEEEeecC-CCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-Cccce
Confidence            467888888899999999999888766555 4589999999999774 4 478999999999999988887655 89999


Q ss_pred             EEecCCCEEE-EecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEE-EEe
Q psy10867        126 KWSADSNFIV-TGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRV-ASV  203 (343)
Q Consensus       126 ~~~~~~~~l~-s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l-~~~  203 (343)
                      +|+|++++|+ +++.++.|++||+.+++....                      +. +...+.+++|+|++  +.+ +++
T Consensus        80 ~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~----------------------~~-~~~~~~~~~~s~dg--~~l~~~~  134 (391)
T 1l0q_A           80 AVSPDGKQVYVTNMASSTLSVIDTTSNTVAGT----------------------VK-TGKSPLGLALSPDG--KKLYVTN  134 (391)
T ss_dssp             EECTTSSEEEEEETTTTEEEEEETTTTEEEEE----------------------EE-CSSSEEEEEECTTS--SEEEEEE
T ss_pred             EECCCCCEEEEEECCCCEEEEEECCCCeEEEE----------------------Ee-CCCCcceEEECCCC--CEEEEEe
Confidence            9999999775 555779999999998754332                      22 34568999999998  555 788


Q ss_pred             eCCCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEE-EEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcE
Q psy10867        204 SHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNI-YMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQV  282 (343)
Q Consensus       204 ~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v  282 (343)
                      +.++.|++||+++++.+..+.....+..++|+|+++++ ++++.++.|++||++......           .+ .+...+
T Consensus       135 ~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~-----------~~-~~~~~~  202 (391)
T 1l0q_A          135 NGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVID-----------TV-KVEAAP  202 (391)
T ss_dssp             TTTTEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE-----------EE-ECSSEE
T ss_pred             CCCCEEEEEECCCCcEEEEEecCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEE-----------EE-ecCCCc
Confidence            88999999999999999888878888999999999988 567789999999998754322           12 345678


Q ss_pred             EEEEEccCCCEEEEEe---CCCcEEEEecccceeeeecccCCceEEEEEccCCCeeeec
Q psy10867        283 TSLSCSITGITLLSSS---ADETLKIWHTISRQCLRTIQHKGPVLGAFLGLLPPAIHDY  338 (343)
Q Consensus       283 ~~~~~s~~~~~l~s~~---~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~  338 (343)
                      .+++|+|++++|++++   .++.|++||+.+++.+..+.....+.+++|+|++++|+++
T Consensus       203 ~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~s  261 (391)
T 1l0q_A          203 SGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPDPAGIAVTPDGKKVYVA  261 (391)
T ss_dssp             EEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEE
T ss_pred             cceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCCCccEEEEccCCCEEEEE
Confidence            9999999999998887   6899999999999999888855668999999999988544

>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*

Probab=100.00  E-value=1.7e-32  Score=237.56  Aligned_cols=307  Identities=9%  Similarity=0.016  Sum_probs=237.2

Q ss_pred             ccceEEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeC--CCcccceecccCCcc
Q psy10867          3 LLNEVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPV--NSQEKAQLRLICPGR   80 (343)
Q Consensus         3 ~v~~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~--~~~~~~~~~~~~~~~   80 (343)
                      +-..+.++...++.|.+||..+++++.++..+.  .+..++|+|+|+++++++.++.|.+||+  .+++.+..+. +...
T Consensus       147 p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~--~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~-~g~~  223 (543)
T 1nir_A          147 LPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGY--AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK-IGIE  223 (543)
T ss_dssp             GGGEEEEEEGGGTEEEEEETTTCCEEEEEECST--TEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE-CCSE
T ss_pred             CCCEEEEEEcCCCeEEEEECCCceEEEEEecCc--ccceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe-cCCC
Confidence            334577788889999999999999999998554  4789999999999888888899999999  7777766554 4556


Q ss_pred             eEEEEECC----CCCEEEEe--cCCeEEEEEccCCceEEEecc----------cCC-CeEEEEEecCCC-EEEEecCCCe
Q psy10867         81 ISSMQASP----DAAYIAVS--IETKLHMWQISSGRLLATASS----------HYQ-PITIVKWSADSN-FIVTGGEDGT  142 (343)
Q Consensus        81 v~~~~~s~----~~~~l~~~--~d~~i~v~~~~~~~~~~~~~~----------~~~-~v~~~~~~~~~~-~l~s~~~dg~  142 (343)
                      +..++|+|    ||++|+++  .+++|.+||..+++++..+..          |.. .+..+.++|++. ++++...++.
T Consensus       224 p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~  303 (543)
T 1nir_A          224 ARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGK  303 (543)
T ss_dssp             EEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTE
T ss_pred             cceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCe
Confidence            89999999    99998874  489999999999999888764          223 788999999765 5667778999


Q ss_pred             EEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEE-EeeCCCeEEEEecCCCceEE
Q psy10867        143 ICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVA-SVSHDRTCKIFDLCTGEDLL  221 (343)
Q Consensus       143 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~-~~~~d~~i~~wd~~~~~~~~  221 (343)
                      |.+||..+.....                    +..+ .+...+..+.|+|++  ++++ ++..+++|.+||..+++.+.
T Consensus       304 i~vvd~~~~~~l~--------------------~~~i-~~~~~~~~~~~spdg--~~l~va~~~~~~v~v~D~~tg~l~~  360 (543)
T 1nir_A          304 VLLVNYKDIDNLT--------------------VTSI-GAAPFLHDGGWDSSH--RYFMTAANNSNKVAVIDSKDRRLSA  360 (543)
T ss_dssp             EEEEECTTSSSCE--------------------EEEE-ECCSSCCCEEECTTS--CEEEEEEGGGTEEEEEETTTTEEEE
T ss_pred             EEEEEecCCCcce--------------------eEEe-ccCcCccCceECCCC--CEEEEEecCCCeEEEEECCCCeEEE
Confidence            9999998754322                    1111 245668889999999  5554 55568999999999999888


Q ss_pred             Eee-----cCCcEEEEEEcCC-CCEEEEEc-CCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEE
Q psy10867        222 SLI-----LDTRLTCVAFDGT-EDNIYMGT-SEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITL  294 (343)
Q Consensus       222 ~~~-----~~~~i~~~~~~~~-~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l  294 (343)
                      .+.     |......+ ++|+ +..++++. .|++|.+||+.+.....    ...+.+..+.+|...+..++++|++++|
T Consensus       361 ~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~----~~~~~v~~l~~~g~~~~~v~~~pdg~~l  435 (543)
T 1nir_A          361 LVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQ----YAWKKVAELQGQGGGSLFIKTHPKSSHL  435 (543)
T ss_dssp             EEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTT----TBTSEEEEEECSCSCCCCEECCTTCCEE
T ss_pred             eeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCch----hcCeEEEEEEcCCCCceEEEcCCCCCcE
Confidence            776     22233333 5777 55556654 58999999998732110    0123366778888888999999999999


Q ss_pred             EEEe-------CCCcEEEEecccceee-eec---------ccCCceEEEEEccCCCeeeeccc
Q psy10867        295 LSSS-------ADETLKIWHTISRQCL-RTI---------QHKGPVLGAFLGLLPPAIHDYDF  340 (343)
Q Consensus       295 ~s~~-------~dg~i~iwd~~~~~~~-~~~---------~~~~~v~~~~~sp~~~~l~~~~~  340 (343)
                      ++++       .+++|.+||+.+++.. ..+         ++...+..+.|+|+|+.|+++..
T Consensus       436 ~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~  498 (543)
T 1nir_A          436 YVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVW  498 (543)
T ss_dssp             EECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEE
T ss_pred             EEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEee
Confidence            9987       2679999999998876 443         24678999999999999997643

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}

Probab=100.00  E-value=3.5e-32  Score=246.22  Aligned_cols=302  Identities=10%  Similarity=0.063  Sum_probs=229.7

Q ss_pred             ccceEEEecCC---------CC-----eEEEEecCCceEEEEEecCCC-----------------------CcceEEEEe
Q psy10867          3 LLNEVAFSYDG---------SG-----AISVWEPKGGTLLMSYKGASV-----------------------LSPHSMCLL   45 (343)
Q Consensus         3 ~v~~~~~s~~~---------dg-----~i~iwd~~~~~~~~~~~~~~~-----------------------~~v~~~~~~   45 (343)
                      .+..+.||+++         |+     .|++||+.+++....+..+..                       ..+.+++|+
T Consensus        38 ~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~S  117 (741)
T 2ecf_A           38 TLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWS  117 (741)
T ss_dssp             CCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEEC
T ss_pred             CCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEEC
Confidence            35667777776         46     899999999988777765533                       038899999


Q ss_pred             CCceEEEEEcCCCeEEEEeCCCcc--cceecccCCcceEEEEECCCCCEEEEecCCeEEEEEccCCceEEEecccCCC--
Q psy10867         46 GNDYVLGVEKGKPMIQAWPVNSQE--KAQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQP--  121 (343)
Q Consensus        46 ~~~~~~~~~~~~~~i~iw~~~~~~--~~~~~~~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~~~~~~--  121 (343)
                      |||+.++.+.. +.|.+||+.++.  ....+..+...+..++|+|||++|+.+.++.|++||+.+++.......+...  
T Consensus       118 pDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~~~i~~~d~~~g~~~~~~~~~~~~~~  196 (741)
T 2ecf_A          118 PDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRGRNLWVIDLASGRQMQLTADGSTTIG  196 (741)
T ss_dssp             TTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEETTEEEEEETTTTEEEECCCCCCSSEE
T ss_pred             CCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeCCcEEEEecCCCCEEEeccCCcccee
Confidence            99998888887 899999999882  3344556778899999999999999887889999999988776655444332  


Q ss_pred             --------------eEEEEEecCCCEEEEecCCC---------------------------------eEEEeecCc-cce
Q psy10867        122 --------------ITIVKWSADSNFIVTGGEDG---------------------------------TICVWQLSR-LIC  153 (343)
Q Consensus       122 --------------v~~~~~~~~~~~l~s~~~dg---------------------------------~i~iwd~~~-~~~  153 (343)
                                    +..+.|+|||++|++++.|+                                 .|.+||+.+ ++.
T Consensus       197 ~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~  276 (741)
T 2ecf_A          197 NGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQT  276 (741)
T ss_dssp             ESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCC
T ss_pred             ccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCce
Confidence                          47799999999999987665                                 788888876 542


Q ss_pred             eeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeC-----CCeEEEEecCCCceEEEeecCC-
Q psy10867        154 KQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSH-----DRTCKIFDLCTGEDLLSLILDT-  227 (343)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~-----d~~i~~wd~~~~~~~~~~~~~~-  227 (343)
                      ...                    .....|...+..++| |++  +.|+.++.     +..|++||+.+++....+.... 
T Consensus       277 ~~~--------------------~~~~~~~~~~~~~~~-pDg--~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~  333 (741)
T 2ecf_A          277 QWI--------------------DLGKEQDIYLARVNW-RDP--QHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSP  333 (741)
T ss_dssp             EEE--------------------CCCSCSSEEEEEEEE-EET--TEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECS
T ss_pred             EEe--------------------cCCCCcceEEEEEEe-CCC--CEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCC
Confidence            211                    111247778999999 999  67775543     6789999999998776665322 


Q ss_pred             ----cEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEE-EEccCCCEEE-EEeCCC
Q psy10867        228 ----RLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSL-SCSITGITLL-SSSADE  301 (343)
Q Consensus       228 ----~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~s~~~~~l~-s~~~dg  301 (343)
                          .+..++|+|+|+++++++.+|.+++|.+.....           ...+..|...+..+ .|+|+++.|+ +++.++
T Consensus       334 ~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~-----------~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~  402 (741)
T 2ecf_A          334 TWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK-----------AAALTHGNWSVDELLAVDEKAGLAYFRAGIES  402 (741)
T ss_dssp             SCCCCCSCCEECTTSCEEEEECTTSSCEEEEECSSSC-----------EEESCCSSSCEEEEEEEETTTTEEEEEECSSC
T ss_pred             CcCCcCCceEECCCCeEEEEecCCCccEEEEEcCCCC-----------eeeeeecceEEEeEeEEeCCCCEEEEEEeCCC
Confidence                356899999999999999999888887763211           22345567778887 5999998775 455555


Q ss_pred             --cEEEEeccc-ceeeeecccCCceEEEEEccCCCeeeecc
Q psy10867        302 --TLKIWHTIS-RQCLRTIQHKGPVLGAFLGLLPPAIHDYD  339 (343)
Q Consensus       302 --~i~iwd~~~-~~~~~~~~~~~~v~~~~~sp~~~~l~~~~  339 (343)
                        .+++|++.. +.....+.....+..++|+|||++|+...
T Consensus       403 ~~~~~l~~~~~~g~~~~~l~~~~~~~~~~~spdg~~l~~~~  443 (741)
T 2ecf_A          403 ARESQIYAVPLQGGQPQRLSKAPGMHSASFARNASVYVDSW  443 (741)
T ss_dssp             TTCBEEEEEETTCCCCEECCCSCSEEEEEECTTSSEEEEEE
T ss_pred             CceEEEEEEEcCCCCeeecccCCCceEEEECCCCCEEEEEe
Confidence              899999874 66566676667789999999999988654

>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}

Probab=100.00  E-value=2.7e-30  Score=211.66  Aligned_cols=304  Identities=8%  Similarity=-0.046  Sum_probs=213.4

Q ss_pred             ceEEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCce-EEEEEcCCCeEEEEeCCCccc-ceecccCCcceE
Q psy10867          5 NEVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDY-VLGVEKGKPMIQAWPVNSQEK-AQLRLICPGRIS   82 (343)
Q Consensus         5 ~~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~~~~i~iw~~~~~~~-~~~~~~~~~~v~   82 (343)
                      ..+.++...++.|.+||..+++.+..+..+.. .+ .++|+|+++ +++++..++.|.+||..+++. ......+..+..
T Consensus        10 ~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~   87 (331)
T 3u4y_A           10 NFGIVVEQHLRRISFFSTDTLEILNQITLGYD-FV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMA   87 (331)
T ss_dssp             CEEEEEEGGGTEEEEEETTTCCEEEEEECCCC-EE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCC
T ss_pred             CEEEEEecCCCeEEEEeCcccceeeeEEccCC-cc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCcc
Confidence            34566777789999999999999888887766 66 999999997 555556578999999999887 555555565655


Q ss_pred             EEEECCCCCEEEEecCC----eEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEe-cCCCe-EEEeecCccceeee
Q psy10867         83 SMQASPDAAYIAVSIET----KLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTG-GEDGT-ICVWQLSRLICKQT  156 (343)
Q Consensus        83 ~~~~s~~~~~l~~~~d~----~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~-~~dg~-i~iwd~~~~~~~~~  156 (343)
                      +++|+|++++++++.++    .|.+||+.+++.+..+..+ ....+++|+|++++++++ ..++. |.+|++........
T Consensus        88 ~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~  166 (331)
T 3u4y_A           88 DVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIP-YDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFD  166 (331)
T ss_dssp             CEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECC-TTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEE
T ss_pred             ceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECC-CCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEee
Confidence            59999999988875443    9999999999888877654 456899999999865554 55577 99999986432211


Q ss_pred             eecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCce---EEEeecCCcEEEEE
Q psy10867        157 VAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGED---LLSLILDTRLTCVA  233 (343)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~---~~~~~~~~~i~~~~  233 (343)
                      .                 . .........+..++|+|+++ .+++++..++.|++||+.+++.   +..+.....+..++
T Consensus       167 ~-----------------~-~~~~~~~~~~~~~~~spdg~-~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~  227 (331)
T 3u4y_A          167 T-----------------G-QEFISGGTRPFNITFTPDGN-FAFVANLIGNSIGILETQNPENITLLNAVGTNNLPGTIV  227 (331)
T ss_dssp             E-----------------E-EEEECSSSSEEEEEECTTSS-EEEEEETTTTEEEEEECSSTTSCEEEEEEECSSCCCCEE
T ss_pred             c-----------------C-CccccCCCCccceEECCCCC-EEEEEeCCCCeEEEEECCCCcccceeeeccCCCCCceEE
Confidence            1                 1 11113445678999999993 2455566789999999999998   77777778889999


Q ss_pred             EcCCCCEEEEEc-CCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEe-CCCcEEEEecccc
Q psy10867        234 FDGTEDNIYMGT-SEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSS-ADETLKIWHTISR  311 (343)
Q Consensus       234 ~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~-~dg~i~iwd~~~~  311 (343)
                      |+|++++++++. .++.|.+||+.+............  +............++|+||+++|++++ .++.|.+||+...
T Consensus       228 ~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~  305 (331)
T 3u4y_A          228 VSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHG--LLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGK  305 (331)
T ss_dssp             ECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECC--CCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSC
T ss_pred             ECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccc--cccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCC
Confidence            999999887765 477899999876543111100000  000011112235689999999886555 4669999999765


Q ss_pred             eeeeecccCCceEEEEEccCC
Q psy10867        312 QCLRTIQHKGPVLGAFLGLLP  332 (343)
Q Consensus       312 ~~~~~~~~~~~v~~~~~sp~~  332 (343)
                      ..-........-....++|++
T Consensus       306 ~~~~~~~~~~~g~~~~~~~~~  326 (331)
T 3u4y_A          306 VVGYVAGIEANGGIAICHPDK  326 (331)
T ss_dssp             EEEECTTCCCBSCEEECCCC-
T ss_pred             cccceecccccCCeEEECCcc
Confidence            433222232222334555554

>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A

Probab=100.00  E-value=4.3e-31  Score=209.06  Aligned_cols=285  Identities=11%  Similarity=0.030  Sum_probs=192.9

Q ss_pred             CceEEEEEecCCC---CcceEEEEeCCc---eEEEEEcCCCeEEEEeCCCc---ccceecccCCcceEEEEECCCCCEEE
Q psy10867         24 GGTLLMSYKGASV---LSPHSMCLLGND---YVLGVEKGKPMIQAWPVNSQ---EKAQLRLICPGRISSMQASPDAAYIA   94 (343)
Q Consensus        24 ~~~~~~~~~~~~~---~~v~~~~~~~~~---~~~~~~~~~~~i~iw~~~~~---~~~~~~~~~~~~v~~~~~s~~~~~l~   94 (343)
                      +-+.+.+++...+   ..+.++-|-..+   ..++++.. ..|++|+..++   +.++....|+.+|..+.+.||..-|+
T Consensus        24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~  102 (356)
T 2w18_A           24 NLQLVSELKNPSGSCSVDVSAMFWERAGCKEPCIITACE-DVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLV  102 (356)
T ss_dssp             CEEEEEEECCCCSSCEEEEEEEEEC----CEEEEEEEES-SEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCE
T ss_pred             eeeeeehhcCCCCCeEEEEeeeeeccCCCCccEEEEecc-ceEEEcccCCCccceeeEEEeccCceeEEEEEcCccccee
Confidence            3456667776653   123444444333   35666666 79999999988   77788889999999999999764443


Q ss_pred             E---ecC--CeEEEEEccCC----ceEEEecccCCCeEEEEEecCCCEEEEec--CCCeEEEeecCc-cceeeeeecCCC
Q psy10867         95 V---SIE--TKLHMWQISSG----RLLATASSHYQPITIVKWSADSNFIVTGG--EDGTICVWQLSR-LICKQTVAFGIP  162 (343)
Q Consensus        95 ~---~~d--~~i~v~~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~s~~--~dg~i~iwd~~~-~~~~~~~~~~~~  162 (343)
                      +   |.=  +.|+..-+...    .......+|...|..+   ++++++.+++  .|+.|++|++.. ++          
T Consensus       103 ~~~~~~~~~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l---~~g~lv~ss~~g~d~~V~~~~~s~dG~----------  169 (356)
T 2w18_A          103 CVALGNLEIREIRALFCSSDDESEKQVLLKSGNIKAVLGL---TKRRLVSSSGTLSDQQVEVMTFAEDGG----------  169 (356)
T ss_dssp             EEEECSSSEEEEEEECC------CCEEEEEEEEEEEEEEE---TTTEEEEEESSSTTCEEEEEEECTTSC----------
T ss_pred             eeeeccccccceEEEEECCCccccccEEEeCCCeEEEEec---CCCcEEEecccCCCCcEEEEEECCCCc----------
Confidence            3   221  12222211111    2222223455445443   5676666644  689999999954 32          


Q ss_pred             CCCCCccccccceeeeecccccceEEEEeec-CCCceEEEEeeCCCeEEEEecCCCceEEEee-cC---CcEEEEEEcCC
Q psy10867        163 GSSGKGVTGLTEPLHVKSQHSLPVTHVTLSK-LGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LD---TRLTCVAFDGT  237 (343)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~---~~i~~~~~~~~  237 (343)
                                  .+..+..|...++.++|+| +|.+.+|++++.|++|++||+++++.+.++. ++   ..+.+++|+|+
T Consensus       170 ------------~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpd  237 (356)
T 2w18_A          170 ------------GKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEM  237 (356)
T ss_dssp             ------------EEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEET
T ss_pred             ------------eeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCC
Confidence                        4445567999999999999 3333899999999999999999999999987 32   35778899999


Q ss_pred             CCEE------------EEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEE
Q psy10867        238 EDNI------------YMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKI  305 (343)
Q Consensus       238 ~~~l------------~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~i  305 (343)
                      ++++            ++|+.|++|++||..+.........      ....+|...+.+..+  ++.++|+++.|++|+|
T Consensus       238 G~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~------~~p~Gh~~~~lsg~~--sg~~lASgS~DgTIkI  309 (356)
T 2w18_A          238 GLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLY------CLPPGQAGRFLEGDV--KDHCAAAILTSGTIAI  309 (356)
T ss_dssp             TEEEEEEC------------CCEEEEEEETTTTEEEEEEEE------CCCTTCCCCEEEEEE--ETTEEEEEETTSCEEE
T ss_pred             CCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEe------eccCCCcceeEcccc--CCCEEEEEcCCCcEEE
Confidence            9887            5577899999999887543321100      001355555444444  3789999999999999


Q ss_pred             Eecccceeeeecc-cCCceE-EEEEccCCCeeeecccCC
Q psy10867        306 WHTISRQCLRTIQ-HKGPVL-GAFLGLLPPAIHDYDFTP  342 (343)
Q Consensus       306 wd~~~~~~~~~~~-~~~~v~-~~~~sp~~~~l~~~~~~~  342 (343)
                      ||+.+++++.++. |...+. .++|+|||++|++++...
T Consensus       310 WDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~  348 (356)
T 2w18_A          310 WDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDG  348 (356)
T ss_dssp             EETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTS
T ss_pred             EECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCC
Confidence            9999999999998 766555 689999999999998653

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=4.1e-31  Score=217.49  Aligned_cols=222  Identities=11%  Similarity=0.092  Sum_probs=177.0

Q ss_pred             EEecCCCCeEEEEecC---------CceEEEEEe-cCCCCcceEEEEeC--CceEEEEEcCCCeEEEEeCCCcccceecc
Q psy10867          8 AFSYDGSGAISVWEPK---------GGTLLMSYK-GASVLSPHSMCLLG--NDYVLGVEKGKPMIQAWPVNSQEKAQLRL   75 (343)
Q Consensus         8 ~~s~~~dg~i~iwd~~---------~~~~~~~~~-~~~~~~v~~~~~~~--~~~~~~~~~~~~~i~iw~~~~~~~~~~~~   75 (343)
                      +++++.|+.|++|+..         +++.+..+. .|.. .|.+++|+|  ++.++++++.||.|++||+.+++......
T Consensus        88 ~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~  166 (343)
T 3lrv_A           88 IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSAN-EIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHS  166 (343)
T ss_dssp             EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSS-CEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEEC
T ss_pred             eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCC-CEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEe
Confidence            6788999999999665         555555555 5666 899999999  99999999999999999999988765543


Q ss_pred             -cCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCCceE-EEecc-cCCCeEEEEEecCCCEEEEecCCCeEEEeecCcc
Q psy10867         76 -ICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGRLL-ATASS-HYQPITIVKWSADSNFIVTGGEDGTICVWQLSRL  151 (343)
Q Consensus        76 -~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~-~~~~~-~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~  151 (343)
                       .+...|.+++|+|++.+|++ +.|+.|++||+++++.+ ..+.. |.++|.+++|+|++.+|++++. +.|++||+++.
T Consensus       167 ~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~-~~v~iwd~~~~  245 (343)
T 3lrv_A          167 AKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECD-QTVVCFDLRKD  245 (343)
T ss_dssp             CCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEES-SBEEEEETTSS
T ss_pred             cCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeC-CeEEEEEcCCC
Confidence             45668999999999999997 68999999999999887 78887 9999999999999999999994 59999999987


Q ss_pred             ceeeeeecCCCCCCCCccccccceeeeecccccce--EEEEeecCCCceEEEEeeC-CCeEEEEecCCCceEEEeecCCc
Q psy10867        152 ICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPV--THVTLSKLGAKSRVASVSH-DRTCKIFDLCTGEDLLSLILDTR  228 (343)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~~~~~~~~~~l~~~~~-d~~i~~wd~~~~~~~~~~~~~~~  228 (343)
                      .....+                   ..+..|...+  .+++|+|++  .+|++++. |+.+++|++.+.......   .+
T Consensus       246 ~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~g--~~l~~~s~~d~~i~v~~~~~~~~~~~~---~~  301 (343)
T 3lrv_A          246 VGTLAY-------------------PTYTIPEFKTGTVTYDIDDSG--KNMIAYSNESNSLTIYKFDKKTKNWTK---DE  301 (343)
T ss_dssp             TTCBSS-------------------CCCBC-----CCEEEEECTTS--SEEEEEETTTTEEEEEEECTTTCSEEE---EE
T ss_pred             Ccceee-------------------cccccccccccceEEEECCCC--CEEEEecCCCCcEEEEEEcccccceEe---cC
Confidence            543322                   1112233333  469999999  79999888 999999999776554443   56


Q ss_pred             EEEEEEcC---CCCEEEEEcCCCcEEEEEe
Q psy10867        229 LTCVAFDG---TEDNIYMGTSEGVIKSFCL  255 (343)
Q Consensus       229 i~~~~~~~---~~~~l~~~~~d~~i~i~d~  255 (343)
                      +..++|.|   +.+.+++++.|+.+.++-.
T Consensus       302 ~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~  331 (343)
T 3lrv_A          302 ESALCLQSDTADFTDMDVVCGDGGIAAILK  331 (343)
T ss_dssp             EEECCC----CCCCEEEEEEETTEEEEEEE
T ss_pred             ceeEecCccccccceeEEEecCCceEEEEe
Confidence            78888998   8899999999999988753

>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A

Probab=100.00  E-value=1.5e-31  Score=225.17  Aligned_cols=264  Identities=11%  Similarity=-0.005  Sum_probs=200.3

Q ss_pred             cceEEEEeCCc-eEEEEEc----CCC----eEEEEeC--CCcccc--eecccCCcceEEEEECC--------------CC
Q psy10867         38 SPHSMCLLGND-YVLGVEK----GKP----MIQAWPV--NSQEKA--QLRLICPGRISSMQASP--------------DA   90 (343)
Q Consensus        38 ~v~~~~~~~~~-~~~~~~~----~~~----~i~iw~~--~~~~~~--~~~~~~~~~v~~~~~s~--------------~~   90 (343)
                      .+...+|.+.+ .++++|.    .+|    .++|||+  .+++.+  ..+..|...+..+++++              .+
T Consensus        64 ~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~  143 (415)
T 2hqs_A           64 EVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFR  143 (415)
T ss_dssp             GCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTT
T ss_pred             CcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCC
Confidence            55666777776 4555553    457    8999999  888766  44667777777777664              14


Q ss_pred             CEEE-EecC------CeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCC---eEEEeecCccceeeeeecC
Q psy10867         91 AYIA-VSIE------TKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDG---TICVWQLSRLICKQTVAFG  160 (343)
Q Consensus        91 ~~l~-~~~d------~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg---~i~iwd~~~~~~~~~~~~~  160 (343)
                      ..++ ++.+      +.|++||+.. .....+.+|...+.+++|+|+++.|++++.++   .|++||+.+++.       
T Consensus       144 ~~l~~~s~~~~~~~~~~i~i~d~~g-~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~-------  215 (415)
T 2hqs_A          144 TRIAYVVQTNGGQFPYELRVSDYDG-YNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAV-------  215 (415)
T ss_dssp             CEEEEEEECSSSSCCEEEEEEETTS-CSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-------
T ss_pred             CEEEEEEecCCCCccceEEEEcCCC-CCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcE-------
Confidence            4444 4443      7999999974 44567778999999999999999999999875   999999988632       


Q ss_pred             CCCCCCCccccccceeeeecccccceEEEEeecCCCceEEE-EeeCCCe--EEEEecCCCceEEEeecCCcEEEEEEcCC
Q psy10867        161 IPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVA-SVSHDRT--CKIFDLCTGEDLLSLILDTRLTCVAFDGT  237 (343)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~-~~~~d~~--i~~wd~~~~~~~~~~~~~~~i~~~~~~~~  237 (343)
                                      ..+..|...+.+++|+|++  +.|+ +++.++.  |++||+++++......+...+.+++|+|+
T Consensus       216 ----------------~~l~~~~~~~~~~~~spdg--~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spd  277 (415)
T 2hqs_A          216 ----------------RQVASFPRHNGAPAFSPDG--SKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPD  277 (415)
T ss_dssp             ----------------EEEECCSSCEEEEEECTTS--SEEEEEECTTSSCEEEEEETTTCCEEECCCCSSCEEEEEECTT
T ss_pred             ----------------EEeecCCCcccCEEEcCCC--CEEEEEEecCCCceEEEEECCCCCEEeCcCCCCcccceEECCC
Confidence                            2345677889999999999  6566 6666554  99999998877544446778999999999


Q ss_pred             CCEEEEEcC-CC--cEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCC---CcEEEEecccc
Q psy10867        238 EDNIYMGTS-EG--VIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSAD---ETLKIWHTISR  311 (343)
Q Consensus       238 ~~~l~~~~~-d~--~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d---g~i~iwd~~~~  311 (343)
                      |++|++++. ++  .|++||+.....            ..+..+...+.+++|+|+|++|++++.+   ..|++||+.++
T Consensus       278 g~~l~~~s~~~g~~~i~~~d~~~~~~------------~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~  345 (415)
T 2hqs_A          278 SQNLAFTSDQAGRPQVYKVNINGGAP------------QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATG  345 (415)
T ss_dssp             SSEEEEEECTTSSCEEEEEETTSSCC------------EECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTC
T ss_pred             CCEEEEEECCCCCcEEEEEECCCCCE------------EEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCC
Confidence            999988776 45  577777765431            2234456788999999999999988764   58999999988


Q ss_pred             eeeeecccCCceEEEEEccCCCeeeeccc
Q psy10867        312 QCLRTIQHKGPVLGAFLGLLPPAIHDYDF  340 (343)
Q Consensus       312 ~~~~~~~~~~~v~~~~~sp~~~~l~~~~~  340 (343)
                      +.. .+.....+.+++|+|||++|++++.
T Consensus       346 ~~~-~l~~~~~~~~~~~spdg~~l~~~s~  373 (415)
T 2hqs_A          346 GVQ-VLSSTFLDETPSLAPNGTMVIYSSS  373 (415)
T ss_dssp             CEE-ECCCSSSCEEEEECTTSSEEEEEEE
T ss_pred             CEE-EecCCCCcCCeEEcCCCCEEEEEEc
Confidence            774 3442238999999999999987753

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24

Probab=100.00  E-value=7.1e-31  Score=237.09  Aligned_cols=301  Identities=10%  Similarity=0.062  Sum_probs=210.7

Q ss_pred             CCCeEEEEecCCceEEEEEecCCC--CcceEEEEeCCceEEEEEcCC---------CeEEEEeCCCccccee--cccCCc
Q psy10867         13 GSGAISVWEPKGGTLLMSYKGASV--LSPHSMCLLGNDYVLGVEKGK---------PMIQAWPVNSQEKAQL--RLICPG   79 (343)
Q Consensus        13 ~dg~i~iwd~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~~~~~~---------~~i~iw~~~~~~~~~~--~~~~~~   79 (343)
                      .||.|++||+.+++....+..|..  ..|.+++|+|||+.++.+..+         +.+.+||+.+++....  ...+..
T Consensus        35 ~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~  114 (723)
T 1xfd_A           35 QKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNA  114 (723)
T ss_dssp             SSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSC
T ss_pred             CCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccc
Confidence            478999999999998888887764  138999999999988887653         6888999998876322  224445


Q ss_pred             ceEEEEECCCCCEEEEecCCeEEEEEccCCceEEEecccCCCe------------------EEEEEecCCCEEEEecCCC
Q psy10867         80 RISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPI------------------TIVKWSADSNFIVTGGEDG  141 (343)
Q Consensus        80 ~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~~~~~~v------------------~~~~~~~~~~~l~s~~~dg  141 (343)
                      .+..++|||||+.||.+.++.|++||+.+++.......+...+                  .+++|+|||+.|++++.|+
T Consensus       115 ~~~~~~~SPdG~~la~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~  194 (723)
T 1xfd_A          115 KLQYAGWGPKGQQLIFIFENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAIND  194 (723)
T ss_dssp             CCSBCCBCSSTTCEEEEETTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEEC
T ss_pred             cccccEECCCCCEEEEEECCeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECC
Confidence            5889999999999998777999999999988776665544433                  7899999999999887543


Q ss_pred             ----------------------------------eEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceE
Q psy10867        142 ----------------------------------TICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVT  187 (343)
Q Consensus       142 ----------------------------------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  187 (343)
                                                        .|++||+.++.....+.                .......+...+.
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~----------------~~~~~~~~~~~~~  258 (723)
T 1xfd_A          195 SRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMM----------------PPDDPRMREYYIT  258 (723)
T ss_dssp             TTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECC----------------CCCCGGGSSEEEE
T ss_pred             CccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEee----------------CCccCCCccceeE
Confidence                                              67777776653222111                0001112366789


Q ss_pred             EEEeecCCCceEEEEeeC----CCeEEEEecCCCceEEEee--cCCcE----EEEEEcCCCCEEEE--EcCCC------c
Q psy10867        188 HVTLSKLGAKSRVASVSH----DRTCKIFDLCTGEDLLSLI--LDTRL----TCVAFDGTEDNIYM--GTSEG------V  249 (343)
Q Consensus       188 ~~~~~~~~~~~~l~~~~~----d~~i~~wd~~~~~~~~~~~--~~~~i----~~~~~~~~~~~l~~--~~~d~------~  249 (343)
                      .++|+|++  +++++.+.    +..|++||+.+++....+.  +...+    ..++|+|+|+.|+.  +..++      .
T Consensus       259 ~~~~SpDg--~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~  336 (723)
T 1xfd_A          259 MVKWATST--KVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYH  336 (723)
T ss_dssp             EEEESSSS--EEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEE
T ss_pred             EEEEeCCC--eEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeE
Confidence            99999999  77766543    3689999999988766543  22333    37899999997775  44566      4


Q ss_pred             EEEEEe-ecccccccccccCCCCCCccccccCcEEE-EEEccCCCEEEEEeCC---CcEEEEecccc--eeeeecc----
Q psy10867        250 IKSFCL-RQVPRTRDHHIQDSTSNPDFIGHEKQVTS-LSCSITGITLLSSSAD---ETLKIWHTISR--QCLRTIQ----  318 (343)
Q Consensus       250 i~i~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~s~~~~~l~s~~~d---g~i~iwd~~~~--~~~~~~~----  318 (343)
                      |++||+ ......         +...+..+...+.. ++|+|||+.|+..+.+   +.+++|++...  .....+.    
T Consensus       337 l~~~d~~~~~~~~---------~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~  407 (723)
T 1xfd_A          337 ITVSSSQPNSSND---------NIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLV  407 (723)
T ss_dssp             EEEECSSCCSSSC---------CCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSS
T ss_pred             EEEEeccCCCCcc---------ceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCCCCcceeccccc
Confidence            556662 222100         01122223334444 6999999998766555   78999998643  2333343    


Q ss_pred             cCCceEEEEEccCCCeeeeccc
Q psy10867        319 HKGPVLGAFLGLLPPAIHDYDF  340 (343)
Q Consensus       319 ~~~~v~~~~~sp~~~~l~~~~~  340 (343)
                      +...+..++|+|||++|+...-
T Consensus       408 ~~~~~~~~~~spdg~~l~~~~~  429 (723)
T 1xfd_A          408 ENCTYFSASFSHSMDFFLLKCE  429 (723)
T ss_dssp             SSCCCCEEEECTTSSEEEEECC
T ss_pred             CCCCeEEEEECCCCCEEEEEcc
Confidence            4567899999999999887543

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*

Probab=100.00  E-value=7.8e-31  Score=236.14  Aligned_cols=292  Identities=14%  Similarity=0.098  Sum_probs=211.0

Q ss_pred             EecCCCCeEEEEecCCceEE-EEEecCC-----------------CCcceEEEEeCCceEEEEEcCCCeEEEEeCCCccc
Q psy10867          9 FSYDGSGAISVWEPKGGTLL-MSYKGAS-----------------VLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEK   70 (343)
Q Consensus         9 ~s~~~dg~i~iwd~~~~~~~-~~~~~~~-----------------~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~   70 (343)
                      ++.++++ | +||+.+++.+ ..+..+.                 . .|.+++|+||+.++++ .+ +.+++||+.+++.
T Consensus        39 ~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~-~v~~~~~spd~~~~~~-~~-~~i~~~d~~~~~~  113 (706)
T 2z3z_A           39 VFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAF-PSFRTLDAGRGLVVLF-TQ-GGLVGFDMLARKV  113 (706)
T ss_dssp             EEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------C-CCEEEEETTTTEEEEE-ET-TEEEEEETTTTEE
T ss_pred             EEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhcccccccc-CceeEEECCCCeEEEE-EC-CEEEEEECCCCce
Confidence            3444566 8 9999999873 4443332                 3 6999999999555555 44 8999999998876


Q ss_pred             ceecccCCcceEEEEECCCCCEEEEecCCeEEEEEccC-----CceEEEecccCCC--------------eEEEEEecCC
Q psy10867         71 AQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISS-----GRLLATASSHYQP--------------ITIVKWSADS  131 (343)
Q Consensus        71 ~~~~~~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~-----~~~~~~~~~~~~~--------------v~~~~~~~~~  131 (343)
                      ... ..+...+..++|+|||++|+.+.++.|++|++.+     ++.......+...              +.++.|+|||
T Consensus       114 ~~l-~~~~~~~~~~~~SpdG~~la~~~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg  192 (706)
T 2z3z_A          114 TYL-FDTNEETASLDFSPVGDRVAYVRNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKG  192 (706)
T ss_dssp             EEE-ECCTTCCTTCEECTTSSEEEEEETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTS
T ss_pred             EEc-cCCcccccCCcCCCCCCEEEEEECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCC
Confidence            543 3556778899999999999998899999999998     8776655544443              4789999999


Q ss_pred             CEEEEec---------------------------------CCCeEEEeecCccceeeeeecCCCCCCCCccccccceeee
Q psy10867        132 NFIVTGG---------------------------------EDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHV  178 (343)
Q Consensus       132 ~~l~s~~---------------------------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (343)
                      ++|++++                                 .+..|.+||+.++....                    +..
T Consensus       193 ~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~--------------------~~~  252 (706)
T 2z3z_A          193 SCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVY--------------------LQT  252 (706)
T ss_dssp             SEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEE--------------------CCC
T ss_pred             CEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEe--------------------ecc
Confidence            9999987                                 44679999998764321                    111


Q ss_pred             ecccccceEEEEeecCCCceEEEEeeCCC-----eEEEEecCCCceEEEee---cCC---cEEEEEEcC--CCCEEEEEc
Q psy10867        179 KSQHSLPVTHVTLSKLGAKSRVASVSHDR-----TCKIFDLCTGEDLLSLI---LDT---RLTCVAFDG--TEDNIYMGT  245 (343)
Q Consensus       179 ~~~~~~~v~~~~~~~~~~~~~l~~~~~d~-----~i~~wd~~~~~~~~~~~---~~~---~i~~~~~~~--~~~~l~~~~  245 (343)
                      ...|...+..++|+|++  +.|++++.++     .|++||+.+++....+.   ...   .+..++|+|  +|++++++.
T Consensus       253 ~~~~~~~~~~~~~spdg--~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~  330 (706)
T 2z3z_A          253 GEPKEKFLTNLSWSPDE--NILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSR  330 (706)
T ss_dssp             CSCTTCEEEEEEECTTS--SEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEEC
T ss_pred             CCCCceeEeeEEEECCC--CEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEc
Confidence            12466789999999999  7888877665     89999999984433332   221   246789999  999999999


Q ss_pred             CCCcEEEEEeecccccccccccCCCCCCccccccCcEEE-EEEccCCCEEEEEeC-CC----cEEEEecccceeeeeccc
Q psy10867        246 SEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTS-LSCSITGITLLSSSA-DE----TLKIWHTISRQCLRTIQH  319 (343)
Q Consensus       246 ~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~s~~~~~l~s~~~-dg----~i~iwd~~~~~~~~~~~~  319 (343)
                      .++.+++|++.....          ....+..|...+.. ++|+|+++.|+.++. ++    .|+.||+.+++ ...+.+
T Consensus       331 ~~g~~~l~~~~~~~~----------~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~-~~~l~~  399 (706)
T 2z3z_A          331 RDGWNHLYLYDTTGR----------LIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK-TKDLTP  399 (706)
T ss_dssp             TTSSCEEEEEETTSC----------EEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC-CEESCC
T ss_pred             cCCccEEEEEECCCC----------EEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC-ceeccC
Confidence            999999998873211          12334556677776 799999987765544 44    56677776665 455567


Q ss_pred             CCceEEEEEccCCCeeeecc
Q psy10867        320 KGPVLGAFLGLLPPAIHDYD  339 (343)
Q Consensus       320 ~~~v~~~~~sp~~~~l~~~~  339 (343)
                      ...+.+++|+|||++|+...
T Consensus       400 ~~~~~~~~~spdg~~l~~~~  419 (706)
T 2z3z_A          400 ESGMHRTQLSPDGSAIIDIF  419 (706)
T ss_dssp             SSSEEEEEECTTSSEEEEEE
T ss_pred             CCceEEEEECCCCCEEEEEe
Confidence            77899999999999988654

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=99.98  E-value=4.4e-29  Score=205.35  Aligned_cols=298  Identities=10%  Similarity=0.133  Sum_probs=201.3

Q ss_pred             eEEEec-CCCCeEEEEecC-Cc--eEEEEEecCCCCcceEEEEeCCceEEEEEcCC-CeEEEEeCC--Ccccc--eeccc
Q psy10867          6 EVAFSY-DGSGAISVWEPK-GG--TLLMSYKGASVLSPHSMCLLGNDYVLGVEKGK-PMIQAWPVN--SQEKA--QLRLI   76 (343)
Q Consensus         6 ~~~~s~-~~dg~i~iwd~~-~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-~~i~iw~~~--~~~~~--~~~~~   76 (343)
                      ..+|.+ +.++.|++||+. ++  +.+..+. +.. .+.+++|+|++++++++..+ +.|.+|++.  +++..  .....
T Consensus         5 ~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~   82 (343)
T 1ri6_A            5 QTVYIASPESQQIHVWNLNHEGALTLTQVVD-VPG-QVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESAL   82 (343)
T ss_dssp             EEEEEEEGGGTEEEEEEECTTSCEEEEEEEE-CSS-CCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEC
T ss_pred             EEEEEeCCCCCeEEEEEECCCCcEEEeeeEe-cCC-CCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeecccccc
Confidence            344444 779999999985 34  3344443 455 88999999999866665554 899999987  44432  22322


Q ss_pred             CCcceEEEEECCCCCEEEE-e-cCCeEEEEEcc---CCceEEEecccCCCeEEEEEecCCCEEEEec-CCCeEEEeecCc
Q psy10867         77 CPGRISSMQASPDAAYIAV-S-IETKLHMWQIS---SGRLLATASSHYQPITIVKWSADSNFIVTGG-EDGTICVWQLSR  150 (343)
Q Consensus        77 ~~~~v~~~~~s~~~~~l~~-~-~d~~i~v~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~dg~i~iwd~~~  150 (343)
                       ...+..++|+|++++|++ + .++.|.+||+.   ..+....+..+ ..+.+++|+|+++++++++ .++.|.+||+.+
T Consensus        83 -~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~  160 (343)
T 1ri6_A           83 -PGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGL-DGCHSANISPDNRTLWVPALKQDRICLFTVSD  160 (343)
T ss_dssp             -SSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCC-TTBCCCEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred             -CCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCC-CCceEEEECCCCCEEEEecCCCCEEEEEEecC
Confidence             337889999999997765 4 37899999994   33445555444 4588999999999888776 889999999987


Q ss_pred             -cceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEE-EEeeCCCeEEEEecCC--Cce--EEEee
Q psy10867        151 -LICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRV-ASVSHDRTCKIFDLCT--GED--LLSLI  224 (343)
Q Consensus       151 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l-~~~~~d~~i~~wd~~~--~~~--~~~~~  224 (343)
                       +......                 ...........+..++|+|++  +++ +++..++.+.+||++.  ++.  .....
T Consensus       161 ~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~pdg--~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~  221 (343)
T 1ri6_A          161 DGHLVAQD-----------------PAEVTTVEGAGPRHMVFHPNE--QYAYCVNELNSSVDVWELKDPHGNIECVQTLD  221 (343)
T ss_dssp             TSCEEEEE-----------------EEEEECSTTCCEEEEEECTTS--SEEEEEETTTTEEEEEESSCTTSCCEEEEEEE
T ss_pred             CCceeeec-----------------ccccccCCCCCcceEEECCCC--CEEEEEeCCCCEEEEEEecCCCCcEEEEeecc
Confidence             4321110                 001111234578889999999  555 4555899999999953  433  22222


Q ss_pred             -c------CCcEEEEEEcCCCCEEEEE-cCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEE
Q psy10867        225 -L------DTRLTCVAFDGTEDNIYMG-TSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLS  296 (343)
Q Consensus       225 -~------~~~i~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s  296 (343)
                       .      ...+..++|+|++++|+++ ..++.|.+||+........       .+..+..+.. +..++|+|++++|++
T Consensus       222 ~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~-------~~~~~~~~~~-~~~~~~s~dg~~l~~  293 (343)
T 1ri6_A          222 MMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLS-------KEGFQPTETQ-PRGFNVDHSGKYLIA  293 (343)
T ss_dssp             CSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEE-------EEEEEECSSS-CCCEEECTTSSEEEE
T ss_pred             ccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceE-------EeeeecCCCc-cceEEECCCCCEEEE
Confidence             1      2346789999999988754 5789999999973111100       0222333333 888999999998887


Q ss_pred             Ee-CCCcEEEEecc--cce--eeeecccCCceEEEEEccCCCe
Q psy10867        297 SS-ADETLKIWHTI--SRQ--CLRTIQHKGPVLGAFLGLLPPA  334 (343)
Q Consensus       297 ~~-~dg~i~iwd~~--~~~--~~~~~~~~~~v~~~~~sp~~~~  334 (343)
                      ++ .++.|.+|++.  +++  .+..+.......+++|.|+.+.
T Consensus       294 ~~~~~~~v~v~~~d~~~g~~~~~~~~~~g~~p~~i~~~~~~~~  336 (343)
T 1ri6_A          294 AGQKSHHISVYEIVGEQGLLHEKGRYAVGQGPMWVVVNAHEGG  336 (343)
T ss_dssp             ECTTTCEEEEEEEETTTTEEEEEEEEECSSSCCEEEEEEEC--
T ss_pred             ecCCCCeEEEEEEcCCCceeeEccccccCCCCeeEEEEcccCC
Confidence            77 68999999554  554  3444444456788899887654

>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*

Probab=99.97  E-value=2.9e-29  Score=217.35  Aligned_cols=274  Identities=11%  Similarity=0.036  Sum_probs=211.1

Q ss_pred             EEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-ecCCeEEEEEc--cCCceEEEecccC
Q psy10867         43 CLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQI--SSGRLLATASSHY  119 (343)
Q Consensus        43 ~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~--~~~~~~~~~~~~~  119 (343)
                      +++|++.+++++..+++|.+||..+++.+..+..+.. +..++|+|||++|++ +.++.|.+||+  .+++.+..+.. .
T Consensus       144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~-g  221 (543)
T 1nir_A          144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKI-G  221 (543)
T ss_dssp             CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEEC-C
T ss_pred             ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEec-C
Confidence            4889999999999999999999999998876653333 889999999999887 67899999999  88888888874 4


Q ss_pred             CCeEEEEEec----CCCEEEEecC-CCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccc-cceEEEEeec
Q psy10867        120 QPITIVKWSA----DSNFIVTGGE-DGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHS-LPVTHVTLSK  193 (343)
Q Consensus       120 ~~v~~~~~~~----~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~  193 (343)
                      ..+..++|+|    +++++++++. +++|.+||..+.+....+.....            .......|. ..+..+.++|
T Consensus       222 ~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~------------~~~~~~~~~~~~v~~i~~s~  289 (543)
T 1nir_A          222 IEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGM------------TVDTQTYHPEPRVAAIIASH  289 (543)
T ss_dssp             SEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEE------------CSSSCCEESCCCEEEEEECS
T ss_pred             CCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCc------------ccCccccccCCceEEEEECC
Confidence            5679999999    9999999884 89999999998876665431000            000000122 3788999999


Q ss_pred             CCCceEEEEeeCCCeEEEEecCCCceEE--EeecCCcEEEEEEcCCCCEEEEE-cCCCcEEEEEeecccccccccccCCC
Q psy10867        194 LGAKSRVASVSHDRTCKIFDLCTGEDLL--SLILDTRLTCVAFDGTEDNIYMG-TSEGVIKSFCLRQVPRTRDHHIQDST  270 (343)
Q Consensus       194 ~~~~~~l~~~~~d~~i~~wd~~~~~~~~--~~~~~~~i~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~  270 (343)
                      +++ .++++...++.|.+||+.+.+.+.  .+.+...+..+.|+|++++++++ ..+++|.+||+.+.+.......    
T Consensus       290 ~~~-~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~----  364 (543)
T 1nir_A          290 EHP-EFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDV----  364 (543)
T ss_dssp             SSS-EEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEEC----
T ss_pred             CCC-EEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeecc----
Confidence            875 678888899999999998876554  55566778899999999987765 4589999999987654332210    


Q ss_pred             CCCccccccCcEEEEEEccC-CCEEEEEe-CCCcEEEEeccc-------ceeeeecc-cCCceEEEEEccCCCeeeecc
Q psy10867        271 SNPDFIGHEKQVTSLSCSIT-GITLLSSS-ADETLKIWHTIS-------RQCLRTIQ-HKGPVLGAFLGLLPPAIHDYD  339 (343)
Q Consensus       271 ~~~~~~~~~~~v~~~~~s~~-~~~l~s~~-~dg~i~iwd~~~-------~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~  339 (343)
                         ....|.+....+ ++|+ +.+++++. .|++|.+||+.+       +++++++. +.+.+..++|+|++++|++.+
T Consensus       365 ---g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~  439 (543)
T 1nir_A          365 ---GKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDT  439 (543)
T ss_dssp             ---SSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECC
T ss_pred             ---CCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEec
Confidence               011254433333 4777 66667765 689999999998       89999998 777889999999999999875

>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}

Probab=99.97  E-value=1.2e-29  Score=204.19  Aligned_cols=252  Identities=13%  Similarity=0.073  Sum_probs=193.0

Q ss_pred             EcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEEecCCeEEEEEccC-CceEEEeccc-CCCeEEEEEecCC
Q psy10867         54 EKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISS-GRLLATASSH-YQPITIVKWSADS  131 (343)
Q Consensus        54 ~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~-~~~~~~~~~~-~~~v~~~~~~~~~  131 (343)
                      +..++.|++||+.+++... +..|...|.+++|+|++++|+++.++.|++||+.+ ++.......+ ...+.+++|+|++
T Consensus        18 ~~~~~~i~~~d~~~~~~~~-~~~~~~~v~~~~~spdg~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg   96 (297)
T 2ojh_A           18 GSMRSSIEIFNIRTRKMRV-VWQTPELFEAPNWSPDGKYLLLNSEGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDG   96 (297)
T ss_dssp             CCCCEEEEEEETTTTEEEE-EEEESSCCEEEEECTTSSEEEEEETTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTS
T ss_pred             CCcceeEEEEeCCCCceee-eccCCcceEeeEECCCCCEEEEEcCCeEEEEeCCCCCCceEeccccccccccceEECCCC
Confidence            3456899999999887654 44678899999999999999998899999999999 8877776665 3678899999999


Q ss_pred             CEEEEec--CCCeEEEeec--CccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEE-EeeCC
Q psy10867        132 NFIVTGG--EDGTICVWQL--SRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVA-SVSHD  206 (343)
Q Consensus       132 ~~l~s~~--~dg~i~iwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~-~~~~d  206 (343)
                      ++|++++  .++...+|.+  .+..                       ...+..+ ..+..++|+|++  +.++ +++.+
T Consensus        97 ~~l~~~~~~~~~~~~l~~~~~~~~~-----------------------~~~~~~~-~~~~~~~~spdg--~~l~~~~~~~  150 (297)
T 2ojh_A           97 ALYAISDKVEFGKSAIYLLPSTGGT-----------------------PRLMTKN-LPSYWHGWSPDG--KSFTYCGIRD  150 (297)
T ss_dssp             SEEEEEECTTTSSCEEEEEETTCCC-----------------------CEECCSS-SSEEEEEECTTS--SEEEEEEEET
T ss_pred             CEEEEEEeCCCCcceEEEEECCCCc-----------------------eEEeecC-CCccceEECCCC--CEEEEEECCC
Confidence            9999988  3345555554  4331                       1222222 348889999999  5555 78889


Q ss_pred             CeEEEEecC--CCceEEEeecCCcEEEEEEcCCCCEEEEEc-CCCcEEEEEeecccccccccccCCCCCCccccccCcEE
Q psy10867        207 RTCKIFDLC--TGEDLLSLILDTRLTCVAFDGTEDNIYMGT-SEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVT  283 (343)
Q Consensus       207 ~~i~~wd~~--~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  283 (343)
                      +.+++|+++  +++......+...+.+++|+|++++|++++ .++.+++|++.....          ....+..|...+.
T Consensus       151 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~----------~~~~~~~~~~~~~  220 (297)
T 2ojh_A          151 QVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGS----------SVERITDSAYGDW  220 (297)
T ss_dssp             TEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSS----------CEEECCCCSEEEE
T ss_pred             CceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCC----------CcEEEecCCcccC
Confidence            999999853  444433334677899999999999888765 589999999873221          1334556677899


Q ss_pred             EEEEccCCCEEEEEeCC-----------CcEEEEecccceee--eecc-cCCceEEEEEccCCCeeeecccCC
Q psy10867        284 SLSCSITGITLLSSSAD-----------ETLKIWHTISRQCL--RTIQ-HKGPVLGAFLGLLPPAIHDYDFTP  342 (343)
Q Consensus       284 ~~~~s~~~~~l~s~~~d-----------g~i~iwd~~~~~~~--~~~~-~~~~v~~~~~sp~~~~l~~~~~~~  342 (343)
                      .++|+|++++|++++.+           +.|++||+.+++..  ..+. +...+..++|+|++++|++++..+
T Consensus       221 ~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~  293 (297)
T 2ojh_A          221 FPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP  293 (297)
T ss_dssp             EEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred             CeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence            99999999999988766           56999999887653  3333 678899999999999999887654

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=99.97  E-value=2.9e-28  Score=201.38  Aligned_cols=266  Identities=9%  Similarity=0.013  Sum_probs=207.2

Q ss_pred             cceEEEEeCCceEEEEEcC-------CCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE--ecCCeEEEEEccC
Q psy10867         38 SPHSMCLLGNDYVLGVEKG-------KPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV--SIETKLHMWQISS  108 (343)
Q Consensus        38 ~v~~~~~~~~~~~~~~~~~-------~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~--~~d~~i~v~~~~~  108 (343)
                      .+..++|+|++..++++..       ++.|.+||..+++....... ...+..++|+|++++++.  ..++.|.+||+.+
T Consensus        42 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~  120 (353)
T 3vgz_A           42 GAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHN-DLKPFGATINNTTQTLWFGNTVNSAVTAIDAKT  120 (353)
T ss_dssp             SEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEE-SSCCCSEEEETTTTEEEEEETTTTEEEEEETTT
T ss_pred             CccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEec-CCCcceEEECCCCCEEEEEecCCCEEEEEeCCC
Confidence            6789999999866555542       46899999999887765543 345788999999986554  3468999999999


Q ss_pred             CceEEEecccCCC---------eEEEEEecCCCEEEEec--CCCeEEEeecCccceeeeeecCCCCCCCCccccccceee
Q psy10867        109 GRLLATASSHYQP---------ITIVKWSADSNFIVTGG--EDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLH  177 (343)
Q Consensus       109 ~~~~~~~~~~~~~---------v~~~~~~~~~~~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (343)
                      ++.+..+..+...         +.+++|+|+++++++++  .++.|.+||+.+++...                      
T Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~----------------------  178 (353)
T 3vgz_A          121 GEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKT----------------------  178 (353)
T ss_dssp             CCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEE----------------------
T ss_pred             CeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEE----------------------
Confidence            9988877654322         68899999999877765  47899999998875433                      


Q ss_pred             eecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeec-----CCcEEEEEEcCCCCEEEEEcC-CCcEE
Q psy10867        178 VKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLIL-----DTRLTCVAFDGTEDNIYMGTS-EGVIK  251 (343)
Q Consensus       178 ~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~-----~~~i~~~~~~~~~~~l~~~~~-d~~i~  251 (343)
                      .+..+...+..++|+|++  +++++++.++.|.+||+.+++....+..     ...+..++|+|+++++++++. ++.|.
T Consensus       179 ~~~~~~~~~~~~~~s~dg--~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~  256 (353)
T 3vgz_A          179 AIQNTGKMSTGLALDSEG--KRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVL  256 (353)
T ss_dssp             EECCCCTTCCCCEEETTT--TEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEE
T ss_pred             EecCCCCccceEEECCCC--CEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEE
Confidence            233344557889999999  7888888899999999999998877763     335788999999998877665 59999


Q ss_pred             EEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEe-CCCcEEEEecccceeeeecccCCceEEEEEcc
Q psy10867        252 SFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSS-ADETLKIWHTISRQCLRTIQHKGPVLGAFLGL  330 (343)
Q Consensus       252 i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp  330 (343)
                      +||+.+.+.....           ....  ...++|+|++++++.++ .++.|.+||..+++.+..+.....+.+++|+|
T Consensus       257 ~~d~~~~~~~~~~-----------~~~~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~  323 (353)
T 3vgz_A          257 VVDTRNGNILAKV-----------AAPE--SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPTHPNSLALSA  323 (353)
T ss_dssp             EEETTTCCEEEEE-----------ECSS--CCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECCSEEEEEEECT
T ss_pred             EEECCCCcEEEEE-----------EcCC--CceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecCCCCCeEEEcC
Confidence            9999775543322           1111  25689999999665554 68999999999999998888667889999999


Q ss_pred             CCCeeeecccC
Q psy10867        331 LPPAIHDYDFT  341 (343)
Q Consensus       331 ~~~~l~~~~~~  341 (343)
                      +|++|+++...
T Consensus       324 dg~~l~v~~~~  334 (353)
T 3vgz_A          324 DGKTLYVSVKQ  334 (353)
T ss_dssp             TSCEEEEEEEC
T ss_pred             CCCEEEEEEcc
Confidence            99988876543

>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}

Probab=99.97  E-value=4.5e-29  Score=200.90  Aligned_cols=253  Identities=10%  Similarity=0.014  Sum_probs=190.9

Q ss_pred             CCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCC-cccceecccC-CcceEEEEECCC
Q psy10867         12 DGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNS-QEKAQLRLIC-PGRISSMQASPD   89 (343)
Q Consensus        12 ~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~-~~~~~~~~~~-~~~v~~~~~s~~   89 (343)
                      +.++.|++||+.+++... +..|.. .+.+++|+|++++++++.+ +.|.+||+.+ ++.......+ ...+.+++|+|+
T Consensus        19 ~~~~~i~~~d~~~~~~~~-~~~~~~-~v~~~~~spdg~~l~~~~~-~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spd   95 (297)
T 2ojh_A           19 SMRSSIEIFNIRTRKMRV-VWQTPE-LFEAPNWSPDGKYLLLNSE-GLLYRLSLAGDPSPEKVDTGFATICNNDHGISPD   95 (297)
T ss_dssp             CCCEEEEEEETTTTEEEE-EEEESS-CCEEEEECTTSSEEEEEET-TEEEEEESSSCCSCEECCCTTCCCBCSCCEECTT
T ss_pred             CcceeEEEEeCCCCceee-eccCCc-ceEeeEECCCCCEEEEEcC-CeEEEEeCCCCCCceEeccccccccccceEECCC
Confidence            457999999999888764 445666 8999999999999888875 8999999998 7766655444 467899999999


Q ss_pred             CCEEEEec-----CCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEE-EecCCCeEEEeecCccceeeeeecCCCC
Q psy10867         90 AAYIAVSI-----ETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIV-TGGEDGTICVWQLSRLICKQTVAFGIPG  163 (343)
Q Consensus        90 ~~~l~~~~-----d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-s~~~dg~i~iwd~~~~~~~~~~~~~~~~  163 (343)
                      +++|+++.     ...|..+++.++.. ..+..+ ..+..++|+|+++.|+ +++.++.+++|+++....          
T Consensus        96 g~~l~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~----------  163 (297)
T 2ojh_A           96 GALYAISDKVEFGKSAIYLLPSTGGTP-RLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSG----------  163 (297)
T ss_dssp             SSEEEEEECTTTSSCEEEEEETTCCCC-EECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTC----------
T ss_pred             CCEEEEEEeCCCCcceEEEEECCCCce-EEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCC----------
Confidence            99998743     23555666555553 344433 3489999999999877 777899999998643211          


Q ss_pred             CCCCccccccceeeeecccccceEEEEeecCCCceEEEEee-CCCeEEEEecC-CCceEEEee-cCCcEEEEEEcCCCCE
Q psy10867        164 SSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVS-HDRTCKIFDLC-TGEDLLSLI-LDTRLTCVAFDGTEDN  240 (343)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~-~d~~i~~wd~~-~~~~~~~~~-~~~~i~~~~~~~~~~~  240 (343)
                                 ....+..+...+.+++|+|++  .+++.++ .++.+++|+++ .+.....+. +...+..++|+|++++
T Consensus       164 -----------~~~~~~~~~~~~~~~~~s~dg--~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~  230 (297)
T 2ojh_A          164 -----------VETRLTHGEGRNDGPDYSPDG--RWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDK  230 (297)
T ss_dssp             -----------CEEECCCSSSCEEEEEECTTS--SEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSE
T ss_pred             -----------cceEcccCCCccccceECCCC--CEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCE
Confidence                       234445677889999999999  6666554 58999999886 445555554 5567889999999999


Q ss_pred             EEEEcCC-----------CcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCC
Q psy10867        241 IYMGTSE-----------GVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADE  301 (343)
Q Consensus       241 l~~~~~d-----------~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg  301 (343)
                      |++++.+           +.|++||+.+.....         +..+.+|...+..++|+|++++|++++.+.
T Consensus       231 l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~---------~~~~~~~~~~~~~~~~spdg~~l~~~~~~~  293 (297)
T 2ojh_A          231 VVFVSYDADVFDHPRDLDVRVQLMDMDGGNVET---------LFDLFGGQGTMNSPNWSPDGDEFAYVRYFP  293 (297)
T ss_dssp             EEEEEEETTCCSCCSSEEEEEEEEETTSCSCEE---------EEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred             EEEEEcCCCCCcccccCceEEEEEecCCCCcee---------eeccCCCCcccccceECCCCCEEEEEEecc
Confidence            9988765           569999987643221         223446778899999999999998887664

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=99.97  E-value=1.4e-28  Score=201.84  Aligned_cols=270  Identities=12%  Similarity=0.042  Sum_probs=203.3

Q ss_pred             eEEEecCCCCeEEEEecCCceEEEEEecCCCC-cceEEEEeCCce-EEEEEcCCCeEEEEeCCCcccceecc-cC----C
Q psy10867          6 EVAFSYDGSGAISVWEPKGGTLLMSYKGASVL-SPHSMCLLGNDY-VLGVEKGKPMIQAWPVNSQEKAQLRL-IC----P   78 (343)
Q Consensus         6 ~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~-~v~~~~~~~~~~-~~~~~~~~~~i~iw~~~~~~~~~~~~-~~----~   78 (343)
                      .++++.+.++.|.+||+.+++.+..+...... .+..++|+|+++ +++++..++.|.+||+.+++.+..+. .+    .
T Consensus         2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~   81 (337)
T 1pby_B            2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV   81 (337)
T ss_dssp             EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred             cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccc
Confidence            46888899999999999999999888754421 268999999984 55666767899999999888765443 22    2


Q ss_pred             cceEEEEECCCCCEEEEe-------------cCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEE
Q psy10867         79 GRISSMQASPDAAYIAVS-------------IETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICV  145 (343)
Q Consensus        79 ~~v~~~~~s~~~~~l~~~-------------~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~i  145 (343)
                      ..+..++|+|++++|+++             .++.|.+||+.+++.+..+.. ...+.+++|+|++++++++  ++.|.+
T Consensus        82 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~  158 (337)
T 1pby_B           82 KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHV  158 (337)
T ss_dssp             ECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEE
T ss_pred             ccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEE
Confidence            257789999999888875             479999999999888777764 4457889999999988887  688999


Q ss_pred             eecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEee-CCC-----------------
Q psy10867        146 WQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVS-HDR-----------------  207 (343)
Q Consensus       146 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~-~d~-----------------  207 (343)
                      ||+.+++....+...                    .+..+   +.|+|++  ..++..+ .++                 
T Consensus       159 ~d~~~~~~~~~~~~~--------------------~~~~~---~~~s~dg--~~l~~~~~~~~~~~~~~~~~~~~~~~~~  213 (337)
T 1pby_B          159 MDPEAGTLVEDKPIQ--------------------SWEAE---TYAQPDV--LAVWNQHESSGVMATPFYTARKDIDPAD  213 (337)
T ss_dssp             EETTTTEEEEEECST--------------------TTTTT---TBCCCBC--CCCCCCCTTTTEEEEEEEEEBTTSCTTS
T ss_pred             EECCCCcEeeeeecc--------------------ccCCC---ceeCCCc--cEEeeeccCCCceeeeeecccccccccc
Confidence            999987654433210                    00112   2567776  3333322 222                 


Q ss_pred             ------eEEEEecCCCceEEEee---cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccc
Q psy10867        208 ------TCKIFDLCTGEDLLSLI---LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGH  278 (343)
Q Consensus       208 ------~i~~wd~~~~~~~~~~~---~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~  278 (343)
                            .|.+||+.+++.. ...   +...+..++|+|++++++++  ++.|++||+.+.+...           .+. .
T Consensus       214 ~~~~~~~v~~~d~~~~~~~-~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~-----------~~~-~  278 (337)
T 1pby_B          214 PTAYRTGLLTMDLETGEMA-MREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIK-----------RVP-L  278 (337)
T ss_dssp             GGGEEEEEEEEETTTCCEE-EEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEE-----------EEE-C
T ss_pred             ccccccceEEEeCCCCCce-EeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcc-----------eec-C
Confidence                  5789999998875 322   45578899999999999988  7999999987654322           122 2


Q ss_pred             cCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc
Q psy10867        279 EKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ  318 (343)
Q Consensus       279 ~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~  318 (343)
                      ...+.+++|+|++++|++++.++.|++||+.+++.+..+.
T Consensus       279 ~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~  318 (337)
T 1pby_B          279 PHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVD  318 (337)
T ss_dssp             SSCCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEE
T ss_pred             CCceeeEEECCCCCEEEEEcCCCcEEEEECcCCcEEEEEE
Confidence            3457889999999999988999999999999999888886

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}

Probab=99.97  E-value=3.2e-29  Score=226.85  Aligned_cols=280  Identities=13%  Similarity=-0.004  Sum_probs=201.7

Q ss_pred             cceEEEEeCCceEEEEEcC-CC-----eEEEEeCCCcccceecccCC------------------------cceEEEEEC
Q psy10867         38 SPHSMCLLGNDYVLGVEKG-KP-----MIQAWPVNSQEKAQLRLICP------------------------GRISSMQAS   87 (343)
Q Consensus        38 ~v~~~~~~~~~~~~~~~~~-~~-----~i~iw~~~~~~~~~~~~~~~------------------------~~v~~~~~s   87 (343)
                      .+.+++|+|||+.++.++. ++     .|.+||+.+++.......+.                        ..+..++|+
T Consensus        38 ~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~S  117 (741)
T 2ecf_A           38 TLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWS  117 (741)
T ss_dssp             CCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEEC
T ss_pred             CCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEEC
Confidence            6899999999988888776 67     89999999987665554332                        237899999


Q ss_pred             CCCCEEEEecCCeEEEEEccCCc--eEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCC
Q psy10867         88 PDAAYIAVSIETKLHMWQISSGR--LLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSS  165 (343)
Q Consensus        88 ~~~~~l~~~~d~~i~v~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~  165 (343)
                      |||++|+.+.++.|++||+.++.  ....+..|...+..++|+|||++|+.++. +.|++||+.++..........    
T Consensus       118 pDg~~l~~~~~~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~-~~i~~~d~~~g~~~~~~~~~~----  192 (741)
T 2ecf_A          118 PDAQRLLFPLGGELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRG-RNLWVIDLASGRQMQLTADGS----  192 (741)
T ss_dssp             TTSSEEEEEETTEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEET-TEEEEEETTTTEEEECCCCCC----
T ss_pred             CCCCEEEEEeCCcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeC-CcEEEEecCCCCEEEeccCCc----
Confidence            99999998777999999999883  34566778888999999999999998875 699999998864332111000    


Q ss_pred             CCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCC---------------------------------eEEEE
Q psy10867        166 GKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDR---------------------------------TCKIF  212 (343)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~---------------------------------~i~~w  212 (343)
                      .....+.  ...........+..++|+|++  ++|++++.|+                                 .|++|
T Consensus       193 ~~~~~g~--~~~v~~~~~~~~~~~~~SpDg--~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~  268 (741)
T 2ecf_A          193 TTIGNGI--AEFVADEEMDRHTGYWWAPDD--SAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVI  268 (741)
T ss_dssp             SSEEESC--CCHHHHHHSCCCCSEEECTTS--SCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEE
T ss_pred             cceeccc--cceeeeeccccccceEECCCC--CEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEE
Confidence            0000000  000000001225789999999  7888887665                                 88999


Q ss_pred             ecCC-CceEEEe---ecCCcEEEEEEcCCCCEEEEEcC-----CCcEEEEEeecccccccccccCCCCCCccccccC---
Q psy10867        213 DLCT-GEDLLSL---ILDTRLTCVAFDGTEDNIYMGTS-----EGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEK---  280 (343)
Q Consensus       213 d~~~-~~~~~~~---~~~~~i~~~~~~~~~~~l~~~~~-----d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~---  280 (343)
                      |+.+ ++.....   .+...+..++| |||++|+++..     +..|++||+.+.....           .+..+..   
T Consensus       269 d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~-----------~~~~~~~~~~  336 (741)
T 2ecf_A          269 SPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRV-----------LAHETSPTWV  336 (741)
T ss_dssp             CSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEE-----------EEEEECSSCC
T ss_pred             ECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEE-----------EEEcCCCCcC
Confidence            9988 7765443   24567899999 99999997654     5679999987654322           1222222   


Q ss_pred             -cEEEEEEccCCCEEEEEeCCCcEEEEecc-cceeeeecc-cCCceEEE-EEccCCCeeeecc
Q psy10867        281 -QVTSLSCSITGITLLSSSADETLKIWHTI-SRQCLRTIQ-HKGPVLGA-FLGLLPPAIHDYD  339 (343)
Q Consensus       281 -~v~~~~~s~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~-~~~~v~~~-~~sp~~~~l~~~~  339 (343)
                       .+..++|+|||+++++++.||.++||.+. +++ ...+. +...+..+ .|+|+++.|+..+
T Consensus       337 ~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~  398 (741)
T 2ecf_A          337 PLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRA  398 (741)
T ss_dssp             CCCSCCEECTTSCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEE
T ss_pred             CcCCceEECCCCeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEE
Confidence             34678999999999999999988888765 445 66666 77778887 5999999886543

>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*

Probab=99.97  E-value=1.1e-28  Score=230.67  Aligned_cols=283  Identities=8%  Similarity=0.011  Sum_probs=219.2

Q ss_pred             CeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCC-cccceecccCCcceEEEEECCCCCEE
Q psy10867         15 GAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNS-QEKAQLRLICPGRISSMQASPDAAYI   93 (343)
Q Consensus        15 g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~-~~~~~~~~~~~~~v~~~~~s~~~~~l   93 (343)
                      ...++|....+.....+.+|.. .+.++.|+++ .+++++..++.+.||.+.. +.....+..|. .+..++|+|||+.|
T Consensus       183 ~~~~lw~~~~~~~~~~l~~~~~-~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~-~~~~~~~SpDG~~l  259 (1045)
T 1k32_A          183 TRGKIWIEVNSGAFKKIVDMST-HVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRKHTSFT-DYYPRHLNTDGRRI  259 (1045)
T ss_dssp             TCCEEEEEEETTEEEEEECCSS-CCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEECCCCC-SSCEEEEEESSSCE
T ss_pred             CcCCEEEECCCCCeEECcCCCC-cccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceEecCCC-CcceeeEcCCCCEE
Confidence            3455564333344555688888 9999999998 7777777778999997653 33333343444 46677999999999


Q ss_pred             EEecCCeEEEEEccCCceEEEecc-----------cCCCeEEEEEe-cCCCEEEEecCCCeEEEeecCccceeeeeecCC
Q psy10867         94 AVSIETKLHMWQISSGRLLATASS-----------HYQPITIVKWS-ADSNFIVTGGEDGTICVWQLSRLICKQTVAFGI  161 (343)
Q Consensus        94 ~~~~d~~i~v~~~~~~~~~~~~~~-----------~~~~v~~~~~~-~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~  161 (343)
                      +.+.++.|++|++.... +..+..           |...+.+++|+ |+|+.|++++ ++.+.+|++..+.         
T Consensus       260 a~~~~~~i~~~d~~~~~-l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~---------  328 (1045)
T 1k32_A          260 LFSKGGSIYIFNPDTEK-IEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTY---------  328 (1045)
T ss_dssp             EEEETTEEEEECTTTCC-EEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSB---------
T ss_pred             EEEeCCEEEEecCCceE-eeeeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCc---------
Confidence            98889999999995444 345554           33468999999 9999999888 7899999998753         


Q ss_pred             CCCCCCccccccceeeeeccccc-ceEEEEeecCCCceEEEEeeCCCeEE-EEecCCCceEEEeecCCcEEEEEEcCCCC
Q psy10867        162 PGSSGKGVTGLTEPLHVKSQHSL-PVTHVTLSKLGAKSRVASVSHDRTCK-IFDLCTGEDLLSLILDTRLTCVAFDGTED  239 (343)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~l~~~~~d~~i~-~wd~~~~~~~~~~~~~~~i~~~~~~~~~~  239 (343)
                                    ...+..|.. .+..++|+ ++  +.++.++.++.+. +||+.+++......+...+..++|+|+|+
T Consensus       329 --------------~~~~~~~~~~~~~~~~~s-dg--~~l~~~s~~~~l~~~~d~~~~~~~~l~~~~~~~~~~~~SpDG~  391 (1045)
T 1k32_A          329 --------------VLKVPEPLRIRYVRRGGD-TK--VAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGK  391 (1045)
T ss_dssp             --------------EEECSCCSCEEEEEECSS-SE--EEEEEEETTEEEEEEEETTTCCEEECCCCCCSEEEEEECTTSS
T ss_pred             --------------eEEccCCCcceEEeeeEc-CC--CeEEEEECCCceEEEEECCCCCceEecCCccceeeeEECCCCC
Confidence                          223445666 88999999 88  7888888888899 99998776544334557799999999999


Q ss_pred             EEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCC----------cEEEEecc
Q psy10867        240 NIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADE----------TLKIWHTI  309 (343)
Q Consensus       240 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg----------~i~iwd~~  309 (343)
                      +|++++.++.|++||+.+...           .....+|...+.+++|+|||++|++++.++          .|++||+.
T Consensus       392 ~la~~~~~~~v~~~d~~tg~~-----------~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~  460 (1045)
T 1k32_A          392 FAVVANDRFEIMTVDLETGKP-----------TVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDME  460 (1045)
T ss_dssp             EEEEEETTSEEEEEETTTCCE-----------EEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETT
T ss_pred             EEEEECCCCeEEEEECCCCce-----------EEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECC
Confidence            999999999999999976543           223346888899999999999999887654          89999999


Q ss_pred             cceeeeecc-cCCceEEEEEccCCCeeeeccc
Q psy10867        310 SRQCLRTIQ-HKGPVLGAFLGLLPPAIHDYDF  340 (343)
Q Consensus       310 ~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~  340 (343)
                      +++ +..+. +...+..++|+|||++|+.++.
T Consensus       461 ~g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~  491 (1045)
T 1k32_A          461 GRK-IFAATTENSHDYAPAFDADSKNLYYLSY  491 (1045)
T ss_dssp             TTE-EEECSCSSSBEEEEEECTTSCEEEEEES
T ss_pred             CCc-EEEeeCCCcccCCceEcCCCCEEEEEec
Confidence            888 44454 7788999999999999987664

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=99.97  E-value=6.2e-27  Score=193.35  Aligned_cols=253  Identities=12%  Similarity=0.100  Sum_probs=196.4

Q ss_pred             CCeEEEEecCCceEEEEEecCCCCcceEEEEeCCce-EEEEEcCCCeEEEEeCCCcccceecccCCc---------ceEE
Q psy10867         14 SGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDY-VLGVEKGKPMIQAWPVNSQEKAQLRLICPG---------RISS   83 (343)
Q Consensus        14 dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~---------~v~~   83 (343)
                      ++.|.+||..+++.+..+....  .+..++|+|++. ++++...++.|.+||..+++.+..+..+..         .+..
T Consensus        68 ~~~v~~~d~~~~~~~~~~~~~~--~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (353)
T 3vgz_A           68 GGVVYRLDPVTLEVTQAIHNDL--KPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRE  145 (353)
T ss_dssp             SEEEEEECTTTCCEEEEEEESS--CCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEE
T ss_pred             CccEEEEcCCCCeEEEEEecCC--CcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCce
Confidence            4689999999999988887654  678999999986 666667679999999999887655543322         2788


Q ss_pred             EEECCCCCEEEEe---cCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecC
Q psy10867         84 MQASPDAAYIAVS---IETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFG  160 (343)
Q Consensus        84 ~~~s~~~~~l~~~---~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~  160 (343)
                      ++|+|++++++++   .++.|.+||+.+++.+..+..+...+.+++|+|+++.+++++.++.|.+||+.+++....+.. 
T Consensus       146 ~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~-  224 (353)
T 3vgz_A          146 LVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKL-  224 (353)
T ss_dssp             EEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEEC-
T ss_pred             EEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEc-
Confidence            9999999977753   378999999999998888875666688999999999999999999999999998765543321 


Q ss_pred             CCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEE-eeCCCeEEEEecCCCceEEEeecCCcEEEEEEcCCCC
Q psy10867        161 IPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVAS-VSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTED  239 (343)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~-~~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~  239 (343)
                                       ...++...+..++|+|++  ++++. ...++.|.+||..+++.+..+....+ ..++|+|+++
T Consensus       225 -----------------~~~~~~~~~~~~~~s~dg--~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~~~~s~dg~  284 (353)
T 3vgz_A          225 -----------------LDDGKEHFFINISLDTAR--QRAFITDSKAAEVLVVDTRNGNILAKVAAPES-LAVLFNPARN  284 (353)
T ss_dssp             -----------------CCSSSCCCEEEEEEETTT--TEEEEEESSSSEEEEEETTTCCEEEEEECSSC-CCEEEETTTT
T ss_pred             -----------------CCCCCCcccceEEECCCC--CEEEEEeCCCCEEEEEECCCCcEEEEEEcCCC-ceEEECCCCC
Confidence                             011245568889999998  54544 44569999999999998888875544 5699999999


Q ss_pred             EEEEEc-CCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCC
Q psy10867        240 NIYMGT-SEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADE  301 (343)
Q Consensus       240 ~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg  301 (343)
                      +++++. .++.|.+||..+.+...           .+. ....+.+++|+|+|++|+.+..++
T Consensus       285 ~l~v~~~~~~~v~~~d~~~~~~~~-----------~~~-~~~~~~~~~~s~dg~~l~v~~~~~  335 (353)
T 3vgz_A          285 EAYVTHRQAGKVSVIDAKSYKVVK-----------TFD-TPTHPNSLALSADGKTLYVSVKQK  335 (353)
T ss_dssp             EEEEEETTTTEEEEEETTTTEEEE-----------EEE-CCSEEEEEEECTTSCEEEEEEECC
T ss_pred             EEEEEECCCCeEEEEECCCCeEEE-----------EEe-cCCCCCeEEEcCCCCEEEEEEccc
Confidence            776655 68999999987754432           222 234678999999999777766554

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*

Probab=99.97  E-value=2.1e-27  Score=213.80  Aligned_cols=275  Identities=9%  Similarity=0.080  Sum_probs=197.8

Q ss_pred             ccceEEEecCC------CCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCC-----cccc
Q psy10867          3 LLNEVAFSYDG------SGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNS-----QEKA   71 (343)
Q Consensus         3 ~v~~~~~s~~~------dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~-----~~~~   71 (343)
                      .+..+.||+++      ++.|++||+.+++.... ..+.. .+.+++|+|||+.++.+.+ +.|.+|++.+     ++..
T Consensus        83 ~v~~~~~spd~~~~~~~~~~i~~~d~~~~~~~~l-~~~~~-~~~~~~~SpdG~~la~~~~-~~i~v~~~~~~~~~~g~~~  159 (706)
T 2z3z_A           83 PSFRTLDAGRGLVVLFTQGGLVGFDMLARKVTYL-FDTNE-ETASLDFSPVGDRVAYVRN-HNLYIARGGKLGEGMSRAI  159 (706)
T ss_dssp             CCEEEEETTTTEEEEEETTEEEEEETTTTEEEEE-ECCTT-CCTTCEECTTSSEEEEEET-TEEEEEECBCTTSCCCCCE
T ss_pred             CceeEEECCCCeEEEEECCEEEEEECCCCceEEc-cCCcc-cccCCcCCCCCCEEEEEEC-CeEEEEecCcccccCCCcE
Confidence            36667777764      58999999988876554 44555 7899999999988888765 8999999998     7765


Q ss_pred             eecccCCcc--------------eEEEEECCCCCEEEEec----------------------------------CCeEEE
Q psy10867         72 QLRLICPGR--------------ISSMQASPDAAYIAVSI----------------------------------ETKLHM  103 (343)
Q Consensus        72 ~~~~~~~~~--------------v~~~~~s~~~~~l~~~~----------------------------------d~~i~v  103 (343)
                      .....+...              +.+++|+|||++|+.+.                                  +..|++
T Consensus       160 ~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~  239 (706)
T 2z3z_A          160 AVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGI  239 (706)
T ss_dssp             ESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEE
T ss_pred             EeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEE
Confidence            544433332              48899999999999742                                  357999


Q ss_pred             EEccCCceEEEec--ccCCCeEEEEEecCCCEEEEecCCC-----eEEEeecCccceeeeeecCCCCCCCCcccccccee
Q psy10867        104 WQISSGRLLATAS--SHYQPITIVKWSADSNFIVTGGEDG-----TICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPL  176 (343)
Q Consensus       104 ~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~s~~~dg-----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  176 (343)
                      ||+.+++......  .|...+.+++|+||++.|++++.++     .|.+||+.++.....+.                 .
T Consensus       240 ~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~-----------------~  302 (706)
T 2z3z_A          240 YHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLF-----------------V  302 (706)
T ss_dssp             EETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEE-----------------E
T ss_pred             EECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEE-----------------E
Confidence            9999887655442  4667899999999999999877665     89999998863222110                 0


Q ss_pred             eeecccccceEEEEeec--CCCceEEEEeeCCCeEEEEecC-CCceEEEee-cCCcEEE-EEEcCCCCEEEEEcC-CC--
Q psy10867        177 HVKSQHSLPVTHVTLSK--LGAKSRVASVSHDRTCKIFDLC-TGEDLLSLI-LDTRLTC-VAFDGTEDNIYMGTS-EG--  248 (343)
Q Consensus       177 ~~~~~~~~~v~~~~~~~--~~~~~~l~~~~~d~~i~~wd~~-~~~~~~~~~-~~~~i~~-~~~~~~~~~l~~~~~-d~--  248 (343)
                      .........+..++|+|  ++  +++++++.++.+++|+++ +++.+..+. +...+.. ++|+|+++.|+.++. ++  
T Consensus       303 ~~~~~~~~~~~~~~~sp~~dg--~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~  380 (706)
T 2z3z_A          303 ETDKHYVEPLHPLTFLPGSNN--QFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPL  380 (706)
T ss_dssp             EECSSCCCCCSCCEECTTCSS--EEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTT
T ss_pred             ccCCCeECccCCceeecCCCC--EEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCc
Confidence            00011112346789999  88  789999999999999876 566666665 4455766 799999998876554 44  


Q ss_pred             --cEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCC----CcEEEEecccce
Q psy10867        249 --VIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSAD----ETLKIWHTISRQ  312 (343)
Q Consensus       249 --~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d----g~i~iwd~~~~~  312 (343)
                        .|+.||+.+..            ...+ .|...+.+++|+|||++++..+.+    +.|++||+.+++
T Consensus       381 ~~~l~~~d~~~~~------------~~~l-~~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~  437 (706)
T 2z3z_A          381 ERHFYCIDIKGGK------------TKDL-TPESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS  437 (706)
T ss_dssp             CBEEEEEETTCCC------------CEES-CCSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred             eEEEEEEEcCCCC------------ceec-cCCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence              45555554422            1112 256678999999999988866443    469999998876

>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*

Probab=99.96  E-value=2.3e-27  Score=221.64  Aligned_cols=303  Identities=10%  Similarity=0.028  Sum_probs=225.3

Q ss_pred             cceEEEecCC-------CCeEEEEecCCceEEEEEec-----------CCCCcceEEEEe-CCceEEEEEcCCCeEEEEe
Q psy10867          4 LNEVAFSYDG-------SGAISVWEPKGGTLLMSYKG-----------ASVLSPHSMCLL-GNDYVLGVEKGKPMIQAWP   64 (343)
Q Consensus         4 v~~~~~s~~~-------dg~i~iwd~~~~~~~~~~~~-----------~~~~~v~~~~~~-~~~~~~~~~~~~~~i~iw~   64 (343)
                      +....|++++       ++.|++||+... .+..+..           |.. .+.+++|+ |||+.++.+.. +.+.+|+
T Consensus       247 ~~~~~~SpDG~~la~~~~~~i~~~d~~~~-~l~~l~~~~~~~~~~~~~~~~-~v~~~~~S~pdG~~la~~~~-~~i~~~~  323 (1045)
T 1k32_A          247 YYPRHLNTDGRRILFSKGGSIYIFNPDTE-KIEKIEIGDLESPEDRIISIP-SKFAEDFSPLDGDLIAFVSR-GQAFIQD  323 (1045)
T ss_dssp             SCEEEEEESSSCEEEEETTEEEEECTTTC-CEEECCCCCCCBCCSEEEECG-GGGEEEEEECGGGCEEEEET-TEEEEEC
T ss_pred             cceeeEcCCCCEEEEEeCCEEEEecCCce-EeeeeccCccccccccccccc-ccceeeecCCCCCEEEEEEc-CEEEEEc
Confidence            3455777776       588999998544 3445555           233 68999999 99988887775 8999999


Q ss_pred             CCCcccceecccCCc-ceEEEEECCCCCEEEE-ecCCeEE-EEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCC
Q psy10867         65 VNSQEKAQLRLICPG-RISSMQASPDAAYIAV-SIETKLH-MWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDG  141 (343)
Q Consensus        65 ~~~~~~~~~~~~~~~-~v~~~~~s~~~~~l~~-~~d~~i~-v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg  141 (343)
                      ..+++... +..+.. .+..++|+ ||+.|+. +.++.+. +|++.+++... +.+|...+..++|+||+++|++++.++
T Consensus       324 ~~~~~~~~-~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~-l~~~~~~~~~~~~SpDG~~la~~~~~~  400 (1045)
T 1k32_A          324 VSGTYVLK-VPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEK-FEENLGNVFAMGVDRNGKFAVVANDRF  400 (1045)
T ss_dssp             TTSSBEEE-CSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEE-CCCCCCSEEEEEECTTSSEEEEEETTS
T ss_pred             CCCCceEE-ccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCceE-ecCCccceeeeEECCCCCEEEEECCCC
Confidence            98876554 446666 89999999 9988886 5566888 89998776554 447888999999999999999999999


Q ss_pred             eEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCC----------CeEEE
Q psy10867        142 TICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHD----------RTCKI  211 (343)
Q Consensus       142 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d----------~~i~~  211 (343)
                      .|++||+.+++.                      ......|...+..++|+|++  ++|++++.+          +.|++
T Consensus       401 ~v~~~d~~tg~~----------------------~~~~~~~~~~v~~~~~SpDG--~~la~~~~~~~~~~~~~~~~~i~l  456 (1045)
T 1k32_A          401 EIMTVDLETGKP----------------------TVIERSREAMITDFTISDNS--RFIAYGFPLKHGETDGYVMQAIHV  456 (1045)
T ss_dssp             EEEEEETTTCCE----------------------EEEEECSSSCCCCEEECTTS--CEEEEEEEECSSTTCSCCEEEEEE
T ss_pred             eEEEEECCCCce----------------------EEeccCCCCCccceEECCCC--CeEEEEecCccccccCCCCCeEEE
Confidence            999999988642                      33334688889999999999  778777664          48999


Q ss_pred             EecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeeccccccc----------------------------
Q psy10867        212 FDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRD----------------------------  263 (343)
Q Consensus       212 wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~----------------------------  263 (343)
                      ||+.+++......+...+..++|+|+|++|++++.++...+|+.........                            
T Consensus       457 ~d~~~g~~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  536 (1045)
T 1k32_A          457 YDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSE  536 (1045)
T ss_dssp             EETTTTEEEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGGCCCGGGSCC
T ss_pred             EECCCCcEEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcchhccccccccCceeEEEEeCCCCCCccccCcCccccc
Confidence            9999887433334667788999999999999998887777776442211000                            


Q ss_pred             ---ccccC-CCCCCccccccCcEEEEEEccCCCEEEE-------------EeCCCcEEEEecccceeeeecccCCceEEE
Q psy10867        264 ---HHIQD-STSNPDFIGHEKQVTSLSCSITGITLLS-------------SSADETLKIWHTISRQCLRTIQHKGPVLGA  326 (343)
Q Consensus       264 ---~~~~~-~~~~~~~~~~~~~v~~~~~s~~~~~l~s-------------~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~  326 (343)
                         +.... ...+..+..|...+..++++||++++++             ......|++||+.+++.....   ..+..+
T Consensus       537 ~~~~d~~g~~~~~~~l~~~~~~~~~~~~s~dg~~~~~~~~~g~~~~~~~~~~~~~~l~~~d~~~~~~~~l~---~~v~~~  613 (1045)
T 1k32_A          537 AGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVTEVK---NNLTDL  613 (1045)
T ss_dssp             CCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCCEEEEE---EEEEEE
T ss_pred             cccccccCHhHceEEcCCCCCChhheEEcCCCeEEEEecccCcccccccccCCCceEEEEECCCCcEEEee---cCcceE
Confidence               00000 0012234456778999999999987775             123457888999887753322   568899


Q ss_pred             EEccCCCeeeecc
Q psy10867        327 FLGLLPPAIHDYD  339 (343)
Q Consensus       327 ~~sp~~~~l~~~~  339 (343)
                      +|||||++|++++
T Consensus       614 ~~S~DG~~l~~~~  626 (1045)
T 1k32_A          614 RLSADRKTVMVRK  626 (1045)
T ss_dssp             EECTTSCEEEEEE
T ss_pred             EECCCCCEEEEEc
Confidence            9999999999865

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=99.96  E-value=2.7e-26  Score=189.17  Aligned_cols=274  Identities=12%  Similarity=0.108  Sum_probs=185.8

Q ss_pred             cCCCCeEEEEecC--CceEEE-EEecCCCCcceEEEEeCCceEEEEEcC--CCeEEEEeCCCcccc--eecccCCcceEE
Q psy10867         11 YDGSGAISVWEPK--GGTLLM-SYKGASVLSPHSMCLLGNDYVLGVEKG--KPMIQAWPVNSQEKA--QLRLICPGRISS   83 (343)
Q Consensus        11 ~~~dg~i~iwd~~--~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~--~~~i~iw~~~~~~~~--~~~~~~~~~v~~   83 (343)
                      .+.++.|.+|++.  +++... ....+.. .+..++|+|+|++++++..  ++.|.+|++.+++..  .....+...+..
T Consensus        12 ~~~~~~i~v~~~d~~tg~~~~~~~~~~~~-~p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~   90 (347)
T 3hfq_A           12 KKTSQGIYQGTLDTTAKTLTNDGLLAATQ-NPTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAY   90 (347)
T ss_dssp             SSSCCEEEEEEEETTTTEEEEEEEEEECS-CCCCEEECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSE
T ss_pred             CCCCCCEEEEEEcCCCCeEEEeeeeeccC-CcceEEEccCCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEE
Confidence            3446678777654  565543 2333445 7889999999996655542  589999999766532  333346677889


Q ss_pred             EEECCCCCEEEE-e-cCCeEEEEEcc-CCc--eEEEecc---------cCCCeEEEEEecCCCEEEEecCCCeEEEeecC
Q psy10867         84 MQASPDAAYIAV-S-IETKLHMWQIS-SGR--LLATASS---------HYQPITIVKWSADSNFIVTGGEDGTICVWQLS  149 (343)
Q Consensus        84 ~~~s~~~~~l~~-~-~d~~i~v~~~~-~~~--~~~~~~~---------~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~  149 (343)
                      ++|+|||++|++ + .++.|.+|++. ++.  .+..+..         +...+.+++|+|+++++++...++.|.+|++.
T Consensus        91 ~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~  170 (347)
T 3hfq_A           91 VAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVS  170 (347)
T ss_dssp             EEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEEC
T ss_pred             EEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEEC
Confidence            999999998776 4 57899999996 333  2222221         12348899999999977777778999999998


Q ss_pred             -ccceeeeeecCCCCCCCCccccccceeeeec-ccccceEEEEeecCCCceEEEEeeCCCeEEEEecCC--Cce--EEEe
Q psy10867        150 -RLICKQTVAFGIPGSSGKGVTGLTEPLHVKS-QHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCT--GED--LLSL  223 (343)
Q Consensus       150 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~--~~~--~~~~  223 (343)
                       ++....                    ..... .....+..++|+|+++ .++++...++.+.+|++..  ++.  +..+
T Consensus       171 ~~g~~~~--------------------~~~~~~~~g~~p~~~~~spdg~-~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~  229 (347)
T 3hfq_A          171 DAGQLSE--------------------QSVLTMEAGFGPRHLVFSPDGQ-YAFLAGELSSQIASLKYDTQTGAFTQLGIV  229 (347)
T ss_dssp             TTSCEEE--------------------EEEEECCTTCCEEEEEECTTSS-EEEEEETTTTEEEEEEEETTTTEEEEEEEE
T ss_pred             CCCcEEE--------------------eeeEEcCCCCCCceEEECCCCC-EEEEEeCCCCEEEEEEecCCCCceEEeeee
Confidence             332211                    11111 1233577899999993 2445566789999999874  443  2222


Q ss_pred             e-cC------CcEEEEEEcCCCCEEEE-EcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEE
Q psy10867        224 I-LD------TRLTCVAFDGTEDNIYM-GTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLL  295 (343)
Q Consensus       224 ~-~~------~~i~~~~~~~~~~~l~~-~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~  295 (343)
                      . ..      ..+..++|+|+|++|++ ...++.|.+|++........        +..+..+...+..++|+|||++|+
T Consensus       230 ~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~--------~~~~~~~~~~~~~~~~spdg~~l~  301 (347)
T 3hfq_A          230 KTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTL--------IQQISTEGDFPRDFDLDPTEAFVV  301 (347)
T ss_dssp             ESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEE--------EEEEECSSSCCCEEEECTTSSEEE
T ss_pred             eecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEE--------eEEEecCCCCcCeEEECCCCCEEE
Confidence            2 11      45889999999998865 45689999999974221111        233444556688999999999888


Q ss_pred             EEeCC-CcEEEE--ecccceee
Q psy10867        296 SSSAD-ETLKIW--HTISRQCL  314 (343)
Q Consensus       296 s~~~d-g~i~iw--d~~~~~~~  314 (343)
                      +++.+ +.|.+|  |..+|+..
T Consensus       302 v~~~~~~~v~v~~~d~~tg~l~  323 (347)
T 3hfq_A          302 VVNQNTDNATLYARDLTSGKLS  323 (347)
T ss_dssp             EEETTTTEEEEEEECTTTCCEE
T ss_pred             EEEcCCCcEEEEEEeCCCCeEE
Confidence            87764 899999  55566654

>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}

Probab=99.96  E-value=9.6e-27  Score=190.53  Aligned_cols=264  Identities=10%  Similarity=0.029  Sum_probs=189.5

Q ss_pred             EEeC-CceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-e-cCCeEEEEEccCCce-EEEeccc
Q psy10867         43 CLLG-NDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-S-IETKLHMWQISSGRL-LATASSH  118 (343)
Q Consensus        43 ~~~~-~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~-~d~~i~v~~~~~~~~-~~~~~~~  118 (343)
                      .|.+ .+.++++...++.|.+||..+++.......+...+ .++|+|+++++++ + .++.|.+||+.+++. ...+..+
T Consensus         4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~   82 (331)
T 3u4y_A            4 MFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEG   82 (331)
T ss_dssp             ---CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEEC
T ss_pred             eEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccC
Confidence            3454 45667777777999999999998876665556666 9999999996665 4 378999999999987 7777767


Q ss_pred             CCCeEEEEEecCCCEEEEecCCC---eEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCC
Q psy10867        119 YQPITIVKWSADSNFIVTGGEDG---TICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLG  195 (343)
Q Consensus       119 ~~~v~~~~~~~~~~~l~s~~~dg---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  195 (343)
                      ..+..+++|+|++++++++..++   .|.+||+.+++....+                      . ....+.+++|+|++
T Consensus        83 ~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~----------------------~-~~~~~~~~~~spdg  139 (331)
T 3u4y_A           83 QSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTI----------------------P-IPYDAVGIAISPNG  139 (331)
T ss_dssp             SSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEE----------------------E-CCTTEEEEEECTTS
T ss_pred             CCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEE----------------------E-CCCCccceEECCCC
Confidence            66666699999999999655553   8999999887544332                      2 23456899999999


Q ss_pred             CceEEEEeeCCCe-EEEEecCCCceE-----EEeecCCcEEEEEEcCCCCEEEEE-cCCCcEEEEEeecccccccccccC
Q psy10867        196 AKSRVASVSHDRT-CKIFDLCTGEDL-----LSLILDTRLTCVAFDGTEDNIYMG-TSEGVIKSFCLRQVPRTRDHHIQD  268 (343)
Q Consensus       196 ~~~~l~~~~~d~~-i~~wd~~~~~~~-----~~~~~~~~i~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~  268 (343)
                      + .++++...++. +.+|++.....+     ..+.....+..++|+|++++++++ ..++.|++||+.+......     
T Consensus       140 ~-~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~-----  213 (331)
T 3u4y_A          140 N-GLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITL-----  213 (331)
T ss_dssp             S-CEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEE-----
T ss_pred             C-EEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccce-----
Confidence            3 35555566688 999998764433     222345668999999999976655 4689999999886543110     


Q ss_pred             CCCCCccccccCcEEEEEEccCCCEEEEE-eCCCcEEEEeccccee--eeecc-c----C---CceEEEEEccCCCeeee
Q psy10867        269 STSNPDFIGHEKQVTSLSCSITGITLLSS-SADETLKIWHTISRQC--LRTIQ-H----K---GPVLGAFLGLLPPAIHD  337 (343)
Q Consensus       269 ~~~~~~~~~~~~~v~~~~~s~~~~~l~s~-~~dg~i~iwd~~~~~~--~~~~~-~----~---~~v~~~~~sp~~~~l~~  337 (343)
                         +..+. ....+..++|+|||++|+.+ ..++.|.+||+.+++.  +..+. .    .   .....++|+||+++|++
T Consensus       214 ---~~~~~-~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v  289 (331)
T 3u4y_A          214 ---LNAVG-TNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFI  289 (331)
T ss_dssp             ---EEEEE-CSSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEE
T ss_pred             ---eeecc-CCCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEE
Confidence               11222 23567889999999977655 4578899999998877  33332 1    1   22356899999999876


Q ss_pred             ccc
Q psy10867        338 YDF  340 (343)
Q Consensus       338 ~~~  340 (343)
                      ++.
T Consensus       290 ~~~  292 (331)
T 3u4y_A          290 SAN  292 (331)
T ss_dssp             EET
T ss_pred             ecC
Confidence            643

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=99.96  E-value=9.7e-27  Score=191.37  Aligned_cols=266  Identities=12%  Similarity=0.127  Sum_probs=182.8

Q ss_pred             ceEEEEEcCCCeEEEEeCCC-cccc-eecccCCcceEEEEECCCCCEEEE-ecC-CeEEEEEcc--CCce--EEEecccC
Q psy10867         48 DYVLGVEKGKPMIQAWPVNS-QEKA-QLRLICPGRISSMQASPDAAYIAV-SIE-TKLHMWQIS--SGRL--LATASSHY  119 (343)
Q Consensus        48 ~~~~~~~~~~~~i~iw~~~~-~~~~-~~~~~~~~~v~~~~~s~~~~~l~~-~~d-~~i~v~~~~--~~~~--~~~~~~~~  119 (343)
                      ..+++++..++.|++|++.. ++.. .....+...+..++|+|++++|++ +.+ +.|.+|++.  +++.  +..+..+.
T Consensus         5 ~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~   84 (343)
T 1ri6_A            5 QTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG   84 (343)
T ss_dssp             EEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS
T ss_pred             EEEEEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC
Confidence            45556657679999999853 3221 222356778899999999997776 444 899999997  5553  34444443


Q ss_pred             CCeEEEEEecCCCEEEEec-CCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCce
Q psy10867        120 QPITIVKWSADSNFIVTGG-EDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKS  198 (343)
Q Consensus       120 ~~v~~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~  198 (343)
                       .+..++|+|+++++++++ .++.|.+||+..+....                   ...... ....+.+++|+|++  +
T Consensus        85 -~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~-------------------~~~~~~-~~~~~~~~~~s~dg--~  141 (343)
T 1ri6_A           85 -SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVG-------------------VVDVVE-GLDGCHSANISPDN--R  141 (343)
T ss_dssp             -CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEE-------------------EEEEEC-CCTTBCCCEECTTS--S
T ss_pred             -CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCcccc-------------------cccccc-CCCCceEEEECCCC--C
Confidence             788999999999776665 48899999995221111                   222222 33458899999999  6


Q ss_pred             EEEEee-CCCeEEEEecCC-CceEE----Eee--cCCcEEEEEEcCCCCEEEEE-cCCCcEEEEEeecccccccccccCC
Q psy10867        199 RVASVS-HDRTCKIFDLCT-GEDLL----SLI--LDTRLTCVAFDGTEDNIYMG-TSEGVIKSFCLRQVPRTRDHHIQDS  269 (343)
Q Consensus       199 ~l~~~~-~d~~i~~wd~~~-~~~~~----~~~--~~~~i~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~  269 (343)
                      ++++++ .++.|++||+.+ ++...    ...  ....+..++|+|++++++++ ..++.|.+|++..........    
T Consensus       142 ~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~----  217 (343)
T 1ri6_A          142 TLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECV----  217 (343)
T ss_dssp             EEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEE----
T ss_pred             EEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEE----
Confidence            666665 899999999987 65432    222  34578899999999977665 478999999996421110000    


Q ss_pred             CCCCccc---cccCcEEEEEEccCCCEEE-EEeCCCcEEEEecc----cceeeeecccCCceEEEEEccCCCeeeeccc
Q psy10867        270 TSNPDFI---GHEKQVTSLSCSITGITLL-SSSADETLKIWHTI----SRQCLRTIQHKGPVLGAFLGLLPPAIHDYDF  340 (343)
Q Consensus       270 ~~~~~~~---~~~~~v~~~~~s~~~~~l~-s~~~dg~i~iwd~~----~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~  340 (343)
                      .....+.   .....+..++|+|++++|+ ++..++.|++||+.    +.+.+..+.....+..++|+|++++|++++.
T Consensus       218 ~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~  296 (343)
T 1ri6_A          218 QTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQ  296 (343)
T ss_dssp             EEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEECT
T ss_pred             eeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCccceEEECCCCCEEEEecC
Confidence            0000011   1134577899999998877 45578999999998    3345555554445899999999999888763

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24

Probab=99.96  E-value=3.5e-28  Score=219.50  Aligned_cols=273  Identities=12%  Similarity=0.041  Sum_probs=191.4

Q ss_pred             cceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCc---ceEEEEECCCCCEEEEec----------CCeEEEE
Q psy10867         38 SPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPG---RISSMQASPDAAYIAVSI----------ETKLHMW  104 (343)
Q Consensus        38 ~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~---~v~~~~~s~~~~~l~~~~----------d~~i~v~  104 (343)
                      .+.+++|+|||+++++ +.||.|++||+.+++....+..|..   .|.+++|||||++|+.+.          ++.+++|
T Consensus        18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~   96 (723)
T 1xfd_A           18 HDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLS   96 (723)
T ss_dssp             CCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEE
T ss_pred             cccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEE
Confidence            5678999999998877 4569999999999987766655554   499999999999998743          2789999


Q ss_pred             EccCCceEEEec---ccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecc
Q psy10867        105 QISSGRLLATAS---SHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQ  181 (343)
Q Consensus       105 ~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (343)
                      |+.+++. ..+.   .|...+..++|+|||+.|+.++. +.|++||+.++...........            . ..+.+
T Consensus        97 d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~------------~-~~~~g  161 (723)
T 1xfd_A           97 KIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKE------------G-VIYNG  161 (723)
T ss_dssp             ESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBT------------T-TEEEE
T ss_pred             ECCCCce-EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCC------------C-ceECc
Confidence            9998876 3333   34455889999999999999886 7999999988654322110000            0 00001


Q ss_pred             c---------ccceEEEEeecCCCceEEEEeeCCC----------------------------------eEEEEecCCCc
Q psy10867        182 H---------SLPVTHVTLSKLGAKSRVASVSHDR----------------------------------TCKIFDLCTGE  218 (343)
Q Consensus       182 ~---------~~~v~~~~~~~~~~~~~l~~~~~d~----------------------------------~i~~wd~~~~~  218 (343)
                      +         ...+.+++|+|++  +.|++++.++                                  .|++||+.+++
T Consensus       162 ~~~~v~~ee~~~~~~~~~~SpDg--~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~  239 (723)
T 1xfd_A          162 LSDWLYEEEILKTHIAHWWSPDG--TRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPT  239 (723)
T ss_dssp             ECCHHHHHTTSSSSEEEEECTTS--SEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSC
T ss_pred             ccceeEEEEeccCcceEEECCCC--CEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCc
Confidence            1         1134789999999  7888776543                                  79999999888


Q ss_pred             eEEEeec-------CCcEEEEEEcCCCCEEEEEcC----CCcEEEEEeecccccccccccCCCCCCccc-cccCcE----
Q psy10867        219 DLLSLIL-------DTRLTCVAFDGTEDNIYMGTS----EGVIKSFCLRQVPRTRDHHIQDSTSNPDFI-GHEKQV----  282 (343)
Q Consensus       219 ~~~~~~~-------~~~i~~~~~~~~~~~l~~~~~----d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~-~~~~~v----  282 (343)
                      ....+..       ...+..++|+|||+++++...    +..|++||+.+.....           .+. .+...+    
T Consensus       240 ~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~-----------~~~~~~~~~~~~~~  308 (723)
T 1xfd_A          240 HDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTK-----------KHEDESEAWLHRQN  308 (723)
T ss_dssp             CCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEE-----------EEEEECSSCCCCCC
T ss_pred             eeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceE-----------EEEeccCCEEeccC
Confidence            6555542       456899999999998877643    3579999987654321           111 122333    


Q ss_pred             EEEEEccCCCEEEE--EeCCC------cEEEEe-cccce--eeeecc-cCCceEE-EEEccCCCeeeecc
Q psy10867        283 TSLSCSITGITLLS--SSADE------TLKIWH-TISRQ--CLRTIQ-HKGPVLG-AFLGLLPPAIHDYD  339 (343)
Q Consensus       283 ~~~~~s~~~~~l~s--~~~dg------~i~iwd-~~~~~--~~~~~~-~~~~v~~-~~~sp~~~~l~~~~  339 (343)
                      ..++|+|||+.|+.  +..++      .|++|| ..+++  +...+. ....+.. ++|+|||+.|+..+
T Consensus       309 ~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~  378 (723)
T 1xfd_A          309 EEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLS  378 (723)
T ss_dssp             CCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEE
T ss_pred             CCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEE
Confidence            37899999997774  45666      577777 34444  145554 3445554 69999999997654

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=99.96  E-value=3.7e-27  Score=193.35  Aligned_cols=253  Identities=7%  Similarity=0.009  Sum_probs=189.8

Q ss_pred             eEEEEEcCCCeEEEEeCCCcccceecccCC-c-ceEEEEECCCCCEEEE--ecCCeEEEEEccCCceEEEecc-c----C
Q psy10867         49 YVLGVEKGKPMIQAWPVNSQEKAQLRLICP-G-RISSMQASPDAAYIAV--SIETKLHMWQISSGRLLATASS-H----Y  119 (343)
Q Consensus        49 ~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~-~-~v~~~~~s~~~~~l~~--~~d~~i~v~~~~~~~~~~~~~~-~----~  119 (343)
                      .+++++..++.|.+||..+++.+..+.... . .+..++|+|+++.++.  ..++.|.+||+.+++.+..+.. +    .
T Consensus         2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~   81 (337)
T 1pby_B            2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV   81 (337)
T ss_dssp             EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred             cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccc
Confidence            466777777999999999988775553222 1 5789999999986654  3568999999999988776653 2    1


Q ss_pred             CCeEEEEEecCCCEEEEec------------CCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceE
Q psy10867        120 QPITIVKWSADSNFIVTGG------------EDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVT  187 (343)
Q Consensus       120 ~~v~~~~~~~~~~~l~s~~------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  187 (343)
                      ..+..++|+|++++++++.            .++.|.+||+.+++....+                      . ....+.
T Consensus        82 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~----------------------~-~~~~~~  138 (337)
T 1pby_B           82 KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAF----------------------E-APRQIT  138 (337)
T ss_dssp             ECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEE----------------------E-CCSSCC
T ss_pred             ccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEE----------------------e-CCCCcc
Confidence            2567899999999988886            5799999999886543322                      1 234577


Q ss_pred             EEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcCCC-------------------
Q psy10867        188 HVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEG-------------------  248 (343)
Q Consensus       188 ~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~-------------------  248 (343)
                      .++|+|++  ++++++  ++.|++||+.+++....+........+.|+|+++.+++.+..+                   
T Consensus       139 ~~~~s~dg--~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (337)
T 1pby_B          139 MLAWARDG--SKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADP  214 (337)
T ss_dssp             CEEECTTS--SCEEEE--SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSG
T ss_pred             eeEECCCC--CEEEEe--CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccc
Confidence            89999999  666666  6889999999998887776433112347899998776654433                   


Q ss_pred             -----cEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecccCCce
Q psy10867        249 -----VIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQHKGPV  323 (343)
Q Consensus       249 -----~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v  323 (343)
                           .|.+||+.+.+.. .         ..+..+...+.+++|+|++++++++  ++.|++||+.+++.+..+.....+
T Consensus       215 ~~~~~~v~~~d~~~~~~~-~---------~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~  282 (337)
T 1pby_B          215 TAYRTGLLTMDLETGEMA-M---------REVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLPHSY  282 (337)
T ss_dssp             GGEEEEEEEEETTTCCEE-E---------EEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECSSCC
T ss_pred             cccccceEEEeCCCCCce-E---------eecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCCCce
Confidence                 3578887764332 1         1234455678899999999999888  789999999999988888766678


Q ss_pred             EEEEEccCCCeeeeccc
Q psy10867        324 LGAFLGLLPPAIHDYDF  340 (343)
Q Consensus       324 ~~~~~sp~~~~l~~~~~  340 (343)
                      .+++|+|++++|++++.
T Consensus       283 ~~~~~s~dg~~l~~~~~  299 (337)
T 1pby_B          283 YSVNVSTDGSTVWLGGA  299 (337)
T ss_dssp             CEEEECTTSCEEEEESB
T ss_pred             eeEEECCCCCEEEEEcC
Confidence            99999999999888754

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=99.96  E-value=9.4e-25  Score=180.90  Aligned_cols=291  Identities=10%  Similarity=0.066  Sum_probs=191.9

Q ss_pred             cCCCCeEEEEec--CCceEEEEEecCCCCcceEEEEeCCceEEEEEcCC----CeEEEEeCCC--cccc--eecccCCcc
Q psy10867         11 YDGSGAISVWEP--KGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGK----PMIQAWPVNS--QEKA--QLRLICPGR   80 (343)
Q Consensus        11 ~~~dg~i~iwd~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~----~~i~iw~~~~--~~~~--~~~~~~~~~   80 (343)
                      .++++.|.+|++  .+++.......+.. .+..++|+|+++++++++.+    +.+.+|+++.  ++..  .....+...
T Consensus        23 ~~~~~~i~~~~~d~~~g~~~~~~~~~~~-~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~  101 (361)
T 3scy_A           23 SGNSKGIYTFRFNEETGESLPLSDAEVA-NPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGAD  101 (361)
T ss_dssp             SSSCCEEEEEEEETTTCCEEEEEEEECS-CCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSC
T ss_pred             CCCCCCEEEEEEeCCCCCEEEeecccCC-CCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCC
Confidence            345788999976  45654333222555 78899999999877776664    7999998765  3332  222234556


Q ss_pred             eEEEEECCCCCEEEE-e-cCCeEEEEEccCCceEEEe------cc--------cCCCeEEEEEecCCCEEEEec-CCCeE
Q psy10867         81 ISSMQASPDAAYIAV-S-IETKLHMWQISSGRLLATA------SS--------HYQPITIVKWSADSNFIVTGG-EDGTI  143 (343)
Q Consensus        81 v~~~~~s~~~~~l~~-~-~d~~i~v~~~~~~~~~~~~------~~--------~~~~v~~~~~~~~~~~l~s~~-~dg~i  143 (343)
                      ...+++  ++++|++ + .++.|.+|++.....+..+      .+        +...+.+++|+|+++++++++ .++.|
T Consensus       102 p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v  179 (361)
T 3scy_A          102 PCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQI  179 (361)
T ss_dssp             EEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEE
T ss_pred             cEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEE
Confidence            777888  7877765 3 5789999999754322211      11        123458899999999665554 58899


Q ss_pred             EEeecCccce------eeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEee-CCCeEEEEecCC
Q psy10867        144 CVWQLSRLIC------KQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVS-HDRTCKIFDLCT  216 (343)
Q Consensus       144 ~iwd~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~-~d~~i~~wd~~~  216 (343)
                      .+|++.....      ....               .........+...+..++|+|++  +++++++ .++.|.+||+.+
T Consensus       180 ~v~~~~~~~~~~~~~~l~~~---------------~~~~~~~~~~~~~~~~~~~spdg--~~l~v~~~~~~~v~v~~~~~  242 (361)
T 3scy_A          180 HKFNINPNANADNKEKFLTK---------------GTPEAFKVAPGSGPRHLIFNSDG--KFAYLINEIGGTVIAFRYAD  242 (361)
T ss_dssp             EEEEECTTCCTTTCCCCEEE---------------EEEEEEECCTTCCEEEEEECTTS--SEEEEEETTTCEEEEEEEET
T ss_pred             EEEEEcCCCCcccccceeec---------------ccccceecCCCCCCeEEEEcCCC--CEEEEEcCCCCeEEEEEecC
Confidence            9999876431      1000               00011222344567899999999  6666655 689999999987


Q ss_pred             Cce--EEEee----cCCcEEEEEEcCCCCEEEEEcCC--CcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEc
Q psy10867        217 GED--LLSLI----LDTRLTCVAFDGTEDNIYMGTSE--GVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCS  288 (343)
Q Consensus       217 ~~~--~~~~~----~~~~i~~~~~~~~~~~l~~~~~d--~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s  288 (343)
                      ++.  +..+.    +......++|+|+|++|+++..+  +.|.+|++........       .+..+.. ...+..++|+
T Consensus       243 g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~-------~~~~~~~-g~~~~~~~~s  314 (361)
T 3scy_A          243 GMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLT-------KVGYQLT-GIHPRNFIIT  314 (361)
T ss_dssp             TEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEE-------EEEEEEC-SSCCCEEEEC
T ss_pred             CceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEE-------EeeEecC-CCCCceEEEC
Confidence            754  22222    12347899999999999776654  8999999963211100       0122222 3467889999


Q ss_pred             cCCCEEEEEe-CCCcEEEE--ecccceeeeecc--cCCceEEEEEc
Q psy10867        289 ITGITLLSSS-ADETLKIW--HTISRQCLRTIQ--HKGPVLGAFLG  329 (343)
Q Consensus       289 ~~~~~l~s~~-~dg~i~iw--d~~~~~~~~~~~--~~~~v~~~~~s  329 (343)
                      |||++|++++ .++.|.+|  |..+++......  +...+.++.|.
T Consensus       315 pdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~~~~p~~v~~~  360 (361)
T 3scy_A          315 PNGKYLLVACRDTNVIQIFERDQATGLLTDIKKDIKVDKPVCLKFV  360 (361)
T ss_dssp             TTSCEEEEEETTTTEEEEEEECTTTCCEEECSCCEECSSEEEEEEE
T ss_pred             CCCCEEEEEECCCCCEEEEEEECCCCcEeecceeeeCCCCeEEEEc
Confidence            9999888877 67899996  555777655543  55678898886

>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A

Probab=99.95  E-value=6.8e-27  Score=205.84  Aligned_cols=255  Identities=10%  Similarity=0.006  Sum_probs=185.6

Q ss_pred             cceEEEEeCCceEEEEEcC-CCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEEec----CCeEEEEEccC---C
Q psy10867         38 SPHSMCLLGNDYVLGVEKG-KPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSI----ETKLHMWQISS---G  109 (343)
Q Consensus        38 ~v~~~~~~~~~~~~~~~~~-~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~----d~~i~v~~~~~---~  109 (343)
                      +|.+++|+|||+.++.++. +|+++||++++++..+....+...+..++|+|| ++++++.    +....+|.+..   +
T Consensus        23 ~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g  101 (582)
T 3o4h_A           23 EKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPG  101 (582)
T ss_dssp             CEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTT
T ss_pred             chheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccCCC
Confidence            8999999999987777654 799999999777655544344468999999999 7776543    34455655433   3


Q ss_pred             ceEEEecccCCCeEEEEEecCCCE-EEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEE
Q psy10867        110 RLLATASSHYQPITIVKWSADSNF-IVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTH  188 (343)
Q Consensus       110 ~~~~~~~~~~~~v~~~~~~~~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  188 (343)
                      ... .+.... .+...+|+|+++. +++.+.++.+.+||+.+++...                       +..+..  .+
T Consensus       102 ~~~-~l~~~~-~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~-----------------------l~~~~~--~~  154 (582)
T 3o4h_A          102 EEQ-RLEAVK-PMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRE-----------------------LARLPG--FG  154 (582)
T ss_dssp             CCE-ECTTSC-SBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEE-----------------------EEEESS--CE
T ss_pred             ccc-cccCCC-CceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEE-----------------------eecCCC--ce
Confidence            333 443322 3456788888863 3333444555699998764321                       112222  78


Q ss_pred             EEeecCCCceEEEEeeCC----CeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcCCC--cEEEEEeecccccc
Q psy10867        189 VTLSKLGAKSRVASVSHD----RTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEG--VIKSFCLRQVPRTR  262 (343)
Q Consensus       189 ~~~~~~~~~~~l~~~~~d----~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~--~i~i~d~~~~~~~~  262 (343)
                      ++|+|+|  +++++++.+    +.|++||+.+++......+...+..++|+|||+.|+++..++  .|++||+.+.... 
T Consensus       155 ~~~spDG--~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-  231 (582)
T 3o4h_A          155 FVSDIRG--DLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-  231 (582)
T ss_dssp             EEEEEET--TEEEEEEEEETTEEEEEEEETTTCCCEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-
T ss_pred             EEECCCC--CEEEEEEEcCCCCeEEEEEcCCCCCceEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-
Confidence            9999999  788887777    789999999888765555677899999999999999888888  8999998764432 


Q ss_pred             cccccCCCCCCccccccCcEEEEE--------EccCCCEEEEEeCCCcEEEEecccceeeeecccCCceEEEEEccCCCe
Q psy10867        263 DHHIQDSTSNPDFIGHEKQVTSLS--------CSITGITLLSSSADETLKIWHTISRQCLRTIQHKGPVLGAFLGLLPPA  334 (343)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~v~~~~--------~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~  334 (343)
                                 .+.+|...+..++        |+|||.++++++.|+.+++|++  |+.+.  ...+.+.+++|+ +++.
T Consensus       232 -----------~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~--~~~~~v~~~~~s-dg~~  295 (582)
T 3o4h_A          232 -----------DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID--GERVE--APQGNHGRVVLW-RGKL  295 (582)
T ss_dssp             -----------ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET--TEEEC--CCSSEEEEEEEE-TTEE
T ss_pred             -----------EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE--CCeec--cCCCceEEEEec-CCEE
Confidence                       2344555555555        9999988899999999999999  76655  344678999999 9988


Q ss_pred             eeecc
Q psy10867        335 IHDYD  339 (343)
Q Consensus       335 l~~~~  339 (343)
                      +++++
T Consensus       296 l~~~s  300 (582)
T 3o4h_A          296 VTSHT  300 (582)
T ss_dssp             EEEEE
T ss_pred             EEEEc
Confidence            87654

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}

Probab=99.95  E-value=1.4e-26  Score=208.87  Aligned_cols=296  Identities=10%  Similarity=0.030  Sum_probs=204.2

Q ss_pred             CCCeEEEEecCCceEEEEEecCCC--CcceEEEEeCCceEEEEEcC---------CCeEEEEeCCCcccceecccCCcce
Q psy10867         13 GSGAISVWEPKGGTLLMSYKGASV--LSPHSMCLLGNDYVLGVEKG---------KPMIQAWPVNSQEKAQLRLICPGRI   81 (343)
Q Consensus        13 ~dg~i~iwd~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~~~~~---------~~~i~iw~~~~~~~~~~~~~~~~~v   81 (343)
                      .|+.|++||+.+++....+.++..  ..+.+++|||||+.++.++.         ++.|++||+.+++.+... .....+
T Consensus        34 ~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~-~l~~~~  112 (719)
T 1z68_A           34 ADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGN-ELPRPI  112 (719)
T ss_dssp             TTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSS-CCCSSB
T ss_pred             CCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccce-ecCccc
Confidence            489999999999998877776542  13899999999988877654         589999999998763111 113568


Q ss_pred             EEEEECCCCCEEEEecCCeEEEEEccCCceEEEe-cccCCCe-----------------EEEEEecCCCEEEEecCCC--
Q psy10867         82 SSMQASPDAAYIAVSIETKLHMWQISSGRLLATA-SSHYQPI-----------------TIVKWSADSNFIVTGGEDG--  141 (343)
Q Consensus        82 ~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~-~~~~~~v-----------------~~~~~~~~~~~l~s~~~dg--  141 (343)
                      ..++|||||+.||.+.++.|++|++.+++..... .++...+                 .+++|+|||+.|++++.|.  
T Consensus       113 ~~~~~SPDG~~la~~~~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~  192 (719)
T 1z68_A          113 QYLCWSPVGSKLAYVYQNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTD  192 (719)
T ss_dssp             CCEEECSSTTCEEEEETTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTT
T ss_pred             ccceECCCCCEEEEEECCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCC
Confidence            8999999999999988999999999988776543 2333322                 4899999999999987542  


Q ss_pred             --------------------------------eEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEE
Q psy10867        142 --------------------------------TICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHV  189 (343)
Q Consensus       142 --------------------------------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  189 (343)
                                                      .|++||+.++.......+              .....+.+|...+..+
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~  258 (719)
T 1z68_A          193 IPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEV--------------PVPAMIASSDYYFSWL  258 (719)
T ss_dssp             SCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEEC--------------CCCHHHHTSCEEEEEE
T ss_pred             CceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEc--------------cCCccCCCCcceEEEe
Confidence                                            677888877643200000              0002234678889999


Q ss_pred             EeecCCCceEEEEeeCC----CeEEEEe----cCCCceEEEe-----ecCCcEE-----EEEEcCCCCEEEE--EcCCCc
Q psy10867        190 TLSKLGAKSRVASVSHD----RTCKIFD----LCTGEDLLSL-----ILDTRLT-----CVAFDGTEDNIYM--GTSEGV  249 (343)
Q Consensus       190 ~~~~~~~~~~l~~~~~d----~~i~~wd----~~~~~~~~~~-----~~~~~i~-----~~~~~~~~~~l~~--~~~d~~  249 (343)
                      +|+|++  +++++....    ..|.+||    ..+++....+     .+...+.     .+.|+|+|+.++.  +..+|.
T Consensus       259 ~~SpD~--~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~  336 (719)
T 1z68_A          259 TWVTDE--RVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGY  336 (719)
T ss_dssp             EESSSS--EEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSC
T ss_pred             EEeCCC--eEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCc
Confidence            999997  777764432    3588899    7777654433     2344455     7899999996654  445564


Q ss_pred             --EEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCC-----CcEEEEeccc--ce-eeeecc-
Q psy10867        250 --IKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSAD-----ETLKIWHTIS--RQ-CLRTIQ-  318 (343)
Q Consensus       250 --i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d-----g~i~iwd~~~--~~-~~~~~~-  318 (343)
                        |++||+....            ...+..+...+..+.++ +++.|+..+.+     +..++|.+..  +. ....+. 
T Consensus       337 ~~l~~~~~~~~~------------~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~  403 (719)
T 1z68_A          337 KHIHYIKDTVEN------------AIQITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTC  403 (719)
T ss_dssp             EEEEEESSCSTT------------CEECSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEECSSSSCCEEESST
T ss_pred             eEEEEEECCCCc------------eEecccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeCCCCCCCceeccC
Confidence              5555554422            12334455567777777 77777766554     8899998764  32 122332 


Q ss_pred             ----cCCceEEEEEccCCCeeeec
Q psy10867        319 ----HKGPVLGAFLGLLPPAIHDY  338 (343)
Q Consensus       319 ----~~~~v~~~~~sp~~~~l~~~  338 (343)
                          +...+..+.|+|++++++..
T Consensus       404 ~~~~~~~~~~~~~~s~dg~~l~~~  427 (719)
T 1z68_A          404 HLRKERCQYYTASFSDYAKYYALV  427 (719)
T ss_dssp             TTTTTTBCBEEEEECGGGSSEEEE
T ss_pred             ccCCCCCceEEEEECCCCCEEEEE
Confidence                44578899999999988754

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=99.95  E-value=6.4e-25  Score=180.95  Aligned_cols=293  Identities=11%  Similarity=0.061  Sum_probs=190.8

Q ss_pred             cceEEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCce-EEEEEcCCCeEEEEeCCCcccceeccc-C----
Q psy10867          4 LNEVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDY-VLGVEKGKPMIQAWPVNSQEKAQLRLI-C----   77 (343)
Q Consensus         4 v~~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~~~~i~iw~~~~~~~~~~~~~-~----   77 (343)
                      -..+.++...++.|++||+.+++.+..+..+....+..++|+|+++ +++++..++.|.+||+.+++....... +    
T Consensus        10 ~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~   89 (349)
T 1jmx_B           10 GHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGE   89 (349)
T ss_dssp             TCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTE
T ss_pred             CCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEccccccc
Confidence            3467788888999999999999999888866522578999999986 455666679999999998877654432 2    


Q ss_pred             -CcceEEEEECCCCCEEEEec-------------CCeEEEEEccCCce---EEEecccCCCeEEEEEecCCCEEEEecCC
Q psy10867         78 -PGRISSMQASPDAAYIAVSI-------------ETKLHMWQISSGRL---LATASSHYQPITIVKWSADSNFIVTGGED  140 (343)
Q Consensus        78 -~~~v~~~~~s~~~~~l~~~~-------------d~~i~v~~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~s~~~d  140 (343)
                       ...+..++|+|||++|+++.             ++.|.+||+.+++.   +..+. +...+.+++|+|+++ +++++. 
T Consensus        90 ~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~-l~~~~~-  166 (349)
T 1jmx_B           90 VGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDGS-LYVAGP-  166 (349)
T ss_dssp             EEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSC-EEEESS-
T ss_pred             ccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCcccceeECCCCc-EEEccC-
Confidence             22378899999999888743             48999999988543   23333 334688999999999 555544 


Q ss_pred             CeEEEeecCccceeeeeecCCCCCCCCccccccceeeee--ccc---ccceEEEEeecCCCceEEEEeeCCCeEEEEecC
Q psy10867        141 GTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVK--SQH---SLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLC  215 (343)
Q Consensus       141 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~  215 (343)
                       .|.+||+.+++....+...........   ........  ...   ......+++++++. ...........+..+|..
T Consensus       167 -~i~~~d~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~~~~~~~~~~~  241 (349)
T 1jmx_B          167 -DIYKMDVKTGKYTVALPLRNWNRKGYS---APDVLYFWPHQSPRHEFSMLYTIARFKDDK-QDPATADLLYGYLSVDLK  241 (349)
T ss_dssp             -SEEEECTTTCCEEEEECSTTCCCTTBC---CCBCCCCCCCCCTTCEEEEEEEEEEC--------CCCEEEEEEEEEETT
T ss_pred             -cEEEEeCCCCceeccccccccCCcccc---CccceeeecCCCcceeEEeeeeeeecCCCc-CCccccccceeEEEEecc
Confidence             499999998876655442211100000   00000000  000   00234466665431 000000011112224444


Q ss_pred             CCceEEE--eecCCcEEEEEEcC-CCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCC
Q psy10867        216 TGEDLLS--LILDTRLTCVAFDG-TEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGI  292 (343)
Q Consensus       216 ~~~~~~~--~~~~~~i~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~  292 (343)
                      +++....  -.....+..++|+| ++++++++  ++.|.+||+.+.+....           +. ....+.+++|+|+++
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~-----------~~-~~~~~~~~~~s~dg~  307 (349)
T 1jmx_B          242 TGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKA-----------AN-LDHTYYCVAFDKKGD  307 (349)
T ss_dssp             TCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEE-----------EE-CSSCCCEEEECSSSS
T ss_pred             CCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEE-----------Ec-CCCCccceEECCCCC
Confidence            4432111  11456788999999 99999988  88999999987543221           21 233467899999999


Q ss_pred             EEEEEeCCCcEEEEecccceeeeecc
Q psy10867        293 TLLSSSADETLKIWHTISRQCLRTIQ  318 (343)
Q Consensus       293 ~l~s~~~dg~i~iwd~~~~~~~~~~~  318 (343)
                      +|++++.++.|++||+.+++.+..+.
T Consensus       308 ~l~~~~~~~~v~v~d~~~~~~~~~~~  333 (349)
T 1jmx_B          308 KLYLGGTFNDLAVFNPDTLEKVKNIK  333 (349)
T ss_dssp             CEEEESBSSEEEEEETTTTEEEEEEE
T ss_pred             EEEEecCCCeEEEEeccccceeeeee
Confidence            88888889999999999999888876

>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}

Probab=99.95  E-value=6.2e-26  Score=189.87  Aligned_cols=287  Identities=11%  Similarity=-0.066  Sum_probs=198.8

Q ss_pred             EEecCCceEEEEEecCCCCcceE-----EEEeCCceEEEEEcC-CC--eEEEEeCCCcccceecccCCcceEEEEECCCC
Q psy10867         19 VWEPKGGTLLMSYKGASVLSPHS-----MCLLGNDYVLGVEKG-KP--MIQAWPVNSQEKAQLRLICPGRISSMQASPDA   90 (343)
Q Consensus        19 iwd~~~~~~~~~~~~~~~~~v~~-----~~~~~~~~~~~~~~~-~~--~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~   90 (343)
                      .+|..++..+..+..+.. ....     .+|+|||+.++.... ++  .|.+||+.+++..+....+...+..+.|+|||
T Consensus        14 ~~~~~~g~~~~~lt~~~~-~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg   92 (388)
T 3pe7_A           14 YQDASTGAQVTRLTPPDV-TCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDD   92 (388)
T ss_dssp             EECTTTCCEEEECSCTTS-CEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTS
T ss_pred             EecCCCCcceEEecCCcc-cccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCC
Confidence            457778888888888775 4444     889999987766655 56  48888999988777666666666677899999


Q ss_pred             CEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEE--EecCCCEEEEe----------------------cCCCeEEE
Q psy10867         91 AYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVK--WSADSNFIVTG----------------------GEDGTICV  145 (343)
Q Consensus        91 ~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~l~s~----------------------~~dg~i~i  145 (343)
                      +.|+. +.++.|++||+.+++....+..+...+....  ++|++++++..                      ..+..|.+
T Consensus        93 ~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  172 (388)
T 3pe7_A           93 DALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMR  172 (388)
T ss_dssp             SEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEE
T ss_pred             CEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEE
Confidence            99887 5577999999999988777666666554444  48899988742                      24578999


Q ss_pred             eecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeec-CCCceEEEEeeCC------CeEEEEecCCCc
Q psy10867        146 WQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSK-LGAKSRVASVSHD------RTCKIFDLCTGE  218 (343)
Q Consensus       146 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~l~~~~~d------~~i~~wd~~~~~  218 (343)
                      ||+.+++.                       ..+..+...+..++|+| ++  +.|+..+.+      ..|.++|...++
T Consensus       173 ~d~~~g~~-----------------------~~l~~~~~~~~~~~~sp~dg--~~l~~~~~~~~~~~~~~l~~~d~~~~~  227 (388)
T 3pe7_A          173 VDLKTGES-----------------------TVILQENQWLGHPIYRPYDD--STVAFCHEGPHDLVDARMWLINEDGTN  227 (388)
T ss_dssp             EETTTCCE-----------------------EEEEEESSCEEEEEEETTEE--EEEEEEECSCTTTSSCSEEEEETTSCC
T ss_pred             EECCCCce-----------------------EEeecCCccccccEECCCCC--CEEEEEEecCCCCCcceEEEEeCCCCc
Confidence            99988632                       23334566789999999 98  677766553      378888876655


Q ss_pred             eEEEeecC--CcEEEEEEcCCCCEEEEEcC-CC----cEEEEEeecccccccccccCCCCCCccccccCc---EEEEEEc
Q psy10867        219 DLLSLILD--TRLTCVAFDGTEDNIYMGTS-EG----VIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQ---VTSLSCS  288 (343)
Q Consensus       219 ~~~~~~~~--~~i~~~~~~~~~~~l~~~~~-d~----~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~---v~~~~~s  288 (343)
                      ........  ..+..++|+|+|+.|+..+. ++    .|++||+.+.+...         +..+.++...   ...+.|+
T Consensus       228 ~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~---------l~~~~~~~~~~~~~~~~~~s  298 (388)
T 3pe7_A          228 MRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQ---------LTSMPACSHLMSNYDGSLMV  298 (388)
T ss_dssp             CEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEE---------EEEECCEEEEEECTTSSEEE
T ss_pred             eEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEE---------EEcCCCceeeeecCCCCeEc
Confidence            43333333  35788999999997765433 22    39999988754321         1112111100   1123799


Q ss_pred             cCCCEEEEE---------eCCCcEEEEecccceeeeecccCC-----------ceEEEEEccCCCeeeeccc
Q psy10867        289 ITGITLLSS---------SADETLKIWHTISRQCLRTIQHKG-----------PVLGAFLGLLPPAIHDYDF  340 (343)
Q Consensus       289 ~~~~~l~s~---------~~dg~i~iwd~~~~~~~~~~~~~~-----------~v~~~~~sp~~~~l~~~~~  340 (343)
                      |||+.|+..         ..+..|++||+.+++......+..           .+..++|+|||+.|+..+.
T Consensus       299 pdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~  370 (388)
T 3pe7_A          299 GDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQHRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSD  370 (388)
T ss_dssp             EEECCC------------CCCCEEEEEETTTTEEEEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEEC
T ss_pred             cCCCcceeEeeeccccccCCCCEEEEEeccCCceEEeccccCcccccccccccCCCCccCCCCCCEEEEEec
Confidence            999988754         456689999998877644333544           5788999999999887653

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=99.95  E-value=2.3e-24  Score=177.57  Aligned_cols=268  Identities=13%  Similarity=0.101  Sum_probs=176.6

Q ss_pred             CCeEEEEeCC--Ccccce-ecccCCcceEEEEECCCCCEEEEec---CCeEEEEEccCCc--eEEEecccCCCeEEEEEe
Q psy10867         57 KPMIQAWPVN--SQEKAQ-LRLICPGRISSMQASPDAAYIAVSI---ETKLHMWQISSGR--LLATASSHYQPITIVKWS  128 (343)
Q Consensus        57 ~~~i~iw~~~--~~~~~~-~~~~~~~~v~~~~~s~~~~~l~~~~---d~~i~v~~~~~~~--~~~~~~~~~~~v~~~~~~  128 (343)
                      ++.|.+|.++  +++... ....+...+..++|+|||++++++.   ++.|.+|++.+++  .+..+..+...+..++|+
T Consensus        15 ~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~s   94 (347)
T 3hfq_A           15 SQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVD   94 (347)
T ss_dssp             CCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEE
T ss_pred             CCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEEC
Confidence            3567777654  444432 2234556778899999999555544   5799999998775  344445567788899999


Q ss_pred             cCCCEEEEec-CCCeEEEeecCccceeeeee-cCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCC
Q psy10867        129 ADSNFIVTGG-EDGTICVWQLSRLICKQTVA-FGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHD  206 (343)
Q Consensus       129 ~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d  206 (343)
                      |++++|++++ .++.|.+|++........+. ....+.   .      +.  ...+...+.+++|+|++  +++++...+
T Consensus        95 pdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~---~------p~--~~~~~~~~~~~~~spdg--~l~v~~~~~  161 (347)
T 3hfq_A           95 EARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGH---G------PR--PEQDGSHIHYTDLTPDN--RLAVIDLGS  161 (347)
T ss_dssp             TTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCC---C------SS--TTCSSCCEEEEEECTTS--CEEEEETTT
T ss_pred             CCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCC---C------CC--ccccCCCceEEEECCCC--cEEEEeCCC
Confidence            9999888877 78999999996322111110 000000   0      00  01133458899999999  677777778


Q ss_pred             CeEEEEecC-CCceEEE--ee--cCCcEEEEEEcCCCCEEEE-EcCCCcEEEEEeeccccc-ccc-cccCCCCCCccccc
Q psy10867        207 RTCKIFDLC-TGEDLLS--LI--LDTRLTCVAFDGTEDNIYM-GTSEGVIKSFCLRQVPRT-RDH-HIQDSTSNPDFIGH  278 (343)
Q Consensus       207 ~~i~~wd~~-~~~~~~~--~~--~~~~i~~~~~~~~~~~l~~-~~~d~~i~i~d~~~~~~~-~~~-~~~~~~~~~~~~~~  278 (343)
                      +.|++||+. +++....  +.  ....+..++|+|+|+++++ +..++.|.+|++...... ... ....   ...-...
T Consensus       162 ~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~---~~~~~~~  238 (347)
T 3hfq_A          162 DKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKT---IPADYTA  238 (347)
T ss_dssp             TEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEES---SCTTCCS
T ss_pred             CEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeee---cCCCCCC
Confidence            999999998 5543322  22  2346888999999997766 566889999998852111 000 0000   0000011


Q ss_pred             cCcEEEEEEccCCCEE-EEEeCCCcEEEEeccc-c--eeeeecc-cCCceEEEEEccCCCeeeeccc
Q psy10867        279 EKQVTSLSCSITGITL-LSSSADETLKIWHTIS-R--QCLRTIQ-HKGPVLGAFLGLLPPAIHDYDF  340 (343)
Q Consensus       279 ~~~v~~~~~s~~~~~l-~s~~~dg~i~iwd~~~-~--~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~  340 (343)
                      ...+..++|+|||++| ++...++.|.+|++.. +  +.+..+. +...+..++|+|||++|++++.
T Consensus       239 ~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~  305 (347)
T 3hfq_A          239 HNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQ  305 (347)
T ss_dssp             CCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEET
T ss_pred             CCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEc
Confidence            2458899999999977 4566789999999973 2  4445554 4567899999999999988764

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=99.95  E-value=8.4e-25  Score=180.24  Aligned_cols=252  Identities=10%  Similarity=-0.014  Sum_probs=186.4

Q ss_pred             EEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCC-cceEEEEECCCCCEEEE--ecCCeEEEEEccCCceEEEecc
Q psy10867         41 SMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICP-GRISSMQASPDAAYIAV--SIETKLHMWQISSGRLLATASS  117 (343)
Q Consensus        41 ~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~~--~~d~~i~v~~~~~~~~~~~~~~  117 (343)
                      .+++++++.+++++..++.|.+||..+++.+..+..+. ..+..++|+|++++++.  ..++.|.+||+.+++.+..+..
T Consensus         4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~   83 (349)
T 1jmx_B            4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANL   83 (349)
T ss_dssp             CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEES
T ss_pred             cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEc
Confidence            45678889999988888999999999988775554332 25789999999986654  3578999999999988776653


Q ss_pred             cC------CCeEEEEEecCCCEEEEecCC------------CeEEEeecCccceeeeeecCCCCCCCCccccccceeeee
Q psy10867        118 HY------QPITIVKWSADSNFIVTGGED------------GTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVK  179 (343)
Q Consensus       118 ~~------~~v~~~~~~~~~~~l~s~~~d------------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (343)
                      +.      ..+..++|+|+++++++++.+            +.|.+||+.+++...                   .+...
T Consensus        84 ~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~-------------------~~~~~  144 (349)
T 1jmx_B           84 SSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAK-------------------PVRTF  144 (349)
T ss_dssp             CCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBC-------------------CSEEE
T ss_pred             ccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccc-------------------eeeec
Confidence            22      237789999999999998865            899999998754322                   11122


Q ss_pred             cccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCC-------------------------cEEEEEE
Q psy10867        180 SQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDT-------------------------RLTCVAF  234 (343)
Q Consensus       180 ~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~-------------------------~i~~~~~  234 (343)
                      . +...+.+++|+|++  + +++++  +.|.+||+.+++....+....                         ....+++
T Consensus       145 ~-~~~~~~~~~~s~dg--~-l~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (349)
T 1jmx_B          145 P-MPRQVYLMRAADDG--S-LYVAG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIAR  218 (349)
T ss_dssp             E-CCSSCCCEEECTTS--C-EEEES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEE
T ss_pred             c-CCCcccceeECCCC--c-EEEcc--CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeee
Confidence            2 33468889999999  6 44443  349999999998877765332                         3455677


Q ss_pred             cCCCC-----------EEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEcc-CCCEEEEEeCCCc
Q psy10867        235 DGTED-----------NIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSI-TGITLLSSSADET  302 (343)
Q Consensus       235 ~~~~~-----------~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~s~~~dg~  302 (343)
                      ++++.           ++.....++.+.+|++..                    +...+..++|+| ++++++++  ++.
T Consensus       219 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~sp~dg~~l~~~--~~~  276 (349)
T 1jmx_B          219 FKDDKQDPATADLLYGYLSVDLKTGKTHTQEFAD--------------------LTELYFTGLRSPKDPNQIYGV--LNR  276 (349)
T ss_dssp             C-------CCCEEEEEEEEEETTTCCEEEEEEEE--------------------CSSCEEEEEECSSCTTEEEEE--ESE
T ss_pred             cCCCcCCccccccceeEEEEeccCCcEEeccccc--------------------CCCcceeeEecCCCCCEEEEE--cCe
Confidence            76542           222344556666666532                    345678999999 99999888  889


Q ss_pred             EEEEecccceeeeecccCCceEEEEEccCCCeeeecc
Q psy10867        303 LKIWHTISRQCLRTIQHKGPVLGAFLGLLPPAIHDYD  339 (343)
Q Consensus       303 i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~  339 (343)
                      |.+||+.+++.+..+.....+.+++|+|++++|++++
T Consensus       277 v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~  313 (349)
T 1jmx_B          277 LAKYDLKQRKLIKAANLDHTYYCVAFDKKGDKLYLGG  313 (349)
T ss_dssp             EEEEETTTTEEEEEEECSSCCCEEEECSSSSCEEEES
T ss_pred             EEEEECccCeEEEEEcCCCCccceEECCCCCEEEEec
Confidence            9999999999888887666788999999999988764

>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A

Probab=99.94  E-value=5e-25  Score=193.95  Aligned_cols=258  Identities=13%  Similarity=0.021  Sum_probs=186.9

Q ss_pred             ccceEEEecCC---------CCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcC---CCeEEEEeCCC---
Q psy10867          3 LLNEVAFSYDG---------SGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKG---KPMIQAWPVNS---   67 (343)
Q Consensus         3 ~v~~~~~s~~~---------dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~---~~~i~iw~~~~---   67 (343)
                      +|..+.|++||         +|+++||++.+++..+....+.. .+..++|+|| +++++++.   +...++|.+..   
T Consensus        23 ~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~-~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~  100 (582)
T 3o4h_A           23 EKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPIN-SVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRP  100 (582)
T ss_dssp             CEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCS-EECEECTTCS-EEEEEEECSTTSCCEEEEEEETTST
T ss_pred             chheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeeccccc-ccccccCCCC-eEEEEeccCCCCcceEEEEEeccCC
Confidence            56777777776         78999999966665544444435 8999999999 77776654   34556654432   


Q ss_pred             cccceecccCCcceEEEEECCCCC--EEEEecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCC----C
Q psy10867         68 QEKAQLRLICPGRISSMQASPDAA--YIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGED----G  141 (343)
Q Consensus        68 ~~~~~~~~~~~~~v~~~~~s~~~~--~l~~~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d----g  141 (343)
                      +.... +.. ...+...+|+||++  .++++.++.+.+||+.+++.......+ .  .+++|+|||++|++++.+    +
T Consensus       101 g~~~~-l~~-~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~-~--~~~~~spDG~~la~~~~~~~~~~  175 (582)
T 3o4h_A          101 GEEQR-LEA-VKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLP-G--FGFVSDIRGDLIAGLGFFGGGRV  175 (582)
T ss_dssp             TCCEE-CTT-SCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEES-S--CEEEEEEETTEEEEEEEEETTEE
T ss_pred             Ccccc-ccC-CCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCC-C--ceEEECCCCCEEEEEEEcCCCCe
Confidence            22222 222 22344667888875  444555666669999988766555433 3  789999999999988876    7


Q ss_pred             eEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCC--eEEEEecCCCce
Q psy10867        142 TICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDR--TCKIFDLCTGED  219 (343)
Q Consensus       142 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~--~i~~wd~~~~~~  219 (343)
                      .|++||+.+++                       ...+..|...+..++|+|+|  +.|+++..++  .|++||+.+++.
T Consensus       176 ~i~~~d~~~g~-----------------------~~~l~~~~~~~~~~~~SpDG--~~l~~~~~~~~~~i~~~d~~~~~~  230 (582)
T 3o4h_A          176 SLFTSNLSSGG-----------------------LRVFDSGEGSFSSASISPGM--KVTAGLETAREARLVTVDPRDGSV  230 (582)
T ss_dssp             EEEEEETTTCC-----------------------CEEECCSSCEEEEEEECTTS--CEEEEEECSSCEEEEEECTTTCCE
T ss_pred             EEEEEcCCCCC-----------------------ceEeecCCCccccceECCCC--CEEEEccCCCeeEEEEEcCCCCcE
Confidence            89999998763                       33456788889999999999  7888888888  899999999887


Q ss_pred             EEEee-cCCcEEEEE--------EcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccC
Q psy10867        220 LLSLI-LDTRLTCVA--------FDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSIT  290 (343)
Q Consensus       220 ~~~~~-~~~~i~~~~--------~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~  290 (343)
                      . .+. +...+..++        |+|||..+++++.++.+++|++  .+..           .   .+.+.+.+++|+ +
T Consensus       231 ~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~-----------~---~~~~~v~~~~~s-d  292 (582)
T 3o4h_A          231 E-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID--GERV-----------E---APQGNHGRVVLW-R  292 (582)
T ss_dssp             E-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET--TEEE-----------C---CCSSEEEEEEEE-T
T ss_pred             E-EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE--CCee-----------c---cCCCceEEEEec-C
Confidence            7 443 444555555        9999988899999999999998  2211           0   123568899999 9


Q ss_pred             CCEEEEEeCCC---cEEEEeccc
Q psy10867        291 GITLLSSSADE---TLKIWHTIS  310 (343)
Q Consensus       291 ~~~l~s~~~dg---~i~iwd~~~  310 (343)
                      ++++++++.+.   .+++||...
T Consensus       293 g~~l~~~s~~~~p~~l~~~d~~~  315 (582)
T 3o4h_A          293 GKLVTSHTSLSTPPRIVSLPSGE  315 (582)
T ss_dssp             TEEEEEEEETTEEEEEEEETTCC
T ss_pred             CEEEEEEcCCCCCCeEEEEcCCC
Confidence            99999888774   477777653

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=99.94  E-value=1.3e-24  Score=183.37  Aligned_cols=217  Identities=13%  Similarity=0.109  Sum_probs=161.6

Q ss_pred             eEEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCccc----------c----
Q psy10867          6 EVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEK----------A----   71 (343)
Q Consensus         6 ~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~----------~----   71 (343)
                      .+.|...  +.+++|+... .      .+.. .+..+++++++.+++++..++ +++|+......          .    
T Consensus        16 ~~~F~~~--~~vri~~~~~-~------~~~~-~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~   84 (434)
T 2oit_A           16 DFQFRAL--KKVRIFDSPE-E------LPKE-RSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKV   84 (434)
T ss_dssp             SEEEEEC--CEEECSCCCS-S------CCCS-CCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECC
T ss_pred             cceeeee--eeEEecCCcc-c------cCCC-CccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccC
Confidence            3445444  4678876531 1      1233 678999999988888888755 89887532110          0    


Q ss_pred             -eecccCCcceEEEEECCCCCEEE----E-ecCCeEEEEEccCC--------c---eEEEecccCCCeEEEEEecC-CCE
Q psy10867         72 -QLRLICPGRISSMQASPDAAYIA----V-SIETKLHMWQISSG--------R---LLATASSHYQPITIVKWSAD-SNF  133 (343)
Q Consensus        72 -~~~~~~~~~v~~~~~s~~~~~l~----~-~~d~~i~v~~~~~~--------~---~~~~~~~~~~~v~~~~~~~~-~~~  133 (343)
                       .....+...|.+++|+|++++|+    + +.|+.|++||+.++        +   .+..+.+|...|.+++|+|+ +++
T Consensus        85 ~~~~~~~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~  164 (434)
T 2oit_A           85 QGLLVPMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSM  164 (434)
T ss_dssp             CCEEECCSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTE
T ss_pred             ccccccCCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCE
Confidence             01123556799999999999999    5 46899999998765        1   24566789999999999997 789


Q ss_pred             EEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEe
Q psy10867        134 IVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFD  213 (343)
Q Consensus       134 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd  213 (343)
                      |++++.||.|++||++++.                      ......+|...|.+++|+|++  ++|++|+.||.|++||
T Consensus       165 las~s~Dg~v~iwD~~~~~----------------------~~~~~~~~~~~v~~v~wspdg--~~lasgs~dg~v~iwd  220 (434)
T 2oit_A          165 VAVCLADGSIAVLQVTETV----------------------KVCATLPSTVAVTSVCWSPKG--KQLAVGKQNGTVVQYL  220 (434)
T ss_dssp             EEEEETTSCEEEEEESSSE----------------------EEEEEECGGGCEEEEEECTTS--SCEEEEETTSCEEEEC
T ss_pred             EEEEECCCeEEEEEcCCCc----------------------ceeeccCCCCceeEEEEcCCC--CEEEEEcCCCcEEEEc
Confidence            9999999999999998863                      223344688999999999998  8999999999999999


Q ss_pred             cCCCceEEEee-c-------CCcEEEEEEcCCCCEEEEE-cCCC------cEEEEEeecc
Q psy10867        214 LCTGEDLLSLI-L-------DTRLTCVAFDGTEDNIYMG-TSEG------VIKSFCLRQV  258 (343)
Q Consensus       214 ~~~~~~~~~~~-~-------~~~i~~~~~~~~~~~l~~~-~~d~------~i~i~d~~~~  258 (343)
                      .+ ++....+. +       ...+.+++|++++.++++. ..+|      .+++|++...
T Consensus       221 ~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~  279 (434)
T 2oit_A          221 PT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK  279 (434)
T ss_dssp             TT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred             cC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence            98 55555443 1       1279999999988877653 3343      3899999865

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=99.94  E-value=1.7e-23  Score=173.32  Aligned_cols=278  Identities=12%  Similarity=0.038  Sum_probs=177.3

Q ss_pred             eCCceEEEEE----cCCCeEEEEeC--CCcccceecccCCcceEEEEECCCCCEEEEe-cC----CeEEEEEccC--Cce
Q psy10867         45 LGNDYVLGVE----KGKPMIQAWPV--NSQEKAQLRLICPGRISSMQASPDAAYIAVS-IE----TKLHMWQISS--GRL  111 (343)
Q Consensus        45 ~~~~~~~~~~----~~~~~i~iw~~--~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~d----~~i~v~~~~~--~~~  111 (343)
                      .++..++..|    ..++.|.+|.+  .+++.......+...+..++|+||+++|+++ .+    +.|.+|++..  ++.
T Consensus        10 ~~~~~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~   89 (361)
T 3scy_A           10 TDSELTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTL   89 (361)
T ss_dssp             GGGEEEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEE
T ss_pred             CCCceEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcE
Confidence            3444444444    23468999866  4454432222266778889999999988864 33    7999999876  433


Q ss_pred             --EEEecccCCCeEEEEEecCCCEEEEec-CCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEE
Q psy10867        112 --LATASSHYQPITIVKWSADSNFIVTGG-EDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTH  188 (343)
Q Consensus       112 --~~~~~~~~~~v~~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  188 (343)
                        +.....+......+++  ++++|++++ .++.|.+|++............... .+.       .......+...+.+
T Consensus        90 ~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~-~g~-------~~~~~~~~~~~~~~  159 (361)
T 3scy_A           90 HLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEF-KGS-------GPDKERQTMPHLHC  159 (361)
T ss_dssp             EEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEEC-CCC-------CSCTTTCSSCCEEE
T ss_pred             EEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEc-cCC-------CCCccccCCCcceE
Confidence              3333445556777887  777776665 6889999999754322211000000 000       00001123345688


Q ss_pred             EEeecCCCceEE-EEeeCCCeEEEEecCCCce--------------EEEeecCCcEEEEEEcCCCCEEEEEc-CCCcEEE
Q psy10867        189 VTLSKLGAKSRV-ASVSHDRTCKIFDLCTGED--------------LLSLILDTRLTCVAFDGTEDNIYMGT-SEGVIKS  252 (343)
Q Consensus       189 ~~~~~~~~~~~l-~~~~~d~~i~~wd~~~~~~--------------~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~i  252 (343)
                      ++|+|++  +++ ++...++.+.+|++.....              .........+..++|+|+++++++++ .++.|.+
T Consensus       160 ~~~spdg--~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v  237 (361)
T 3scy_A          160 VRITPDG--KYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIA  237 (361)
T ss_dssp             EEECTTS--SEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEE
T ss_pred             EEECCCC--CEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEE
Confidence            9999999  544 4555589999998875431              12223456688999999999888776 6899999


Q ss_pred             EEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeC--CCcEEEEecc--cce--eeeecccCCceEEE
Q psy10867        253 FCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSA--DETLKIWHTI--SRQ--CLRTIQHKGPVLGA  326 (343)
Q Consensus       253 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~--dg~i~iwd~~--~~~--~~~~~~~~~~v~~~  326 (343)
                      ||+..........      +.....+...+..++|+|||++|+++..  ++.|.+|++.  +++  .+..+.....+.++
T Consensus       238 ~~~~~g~~~~~~~------~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~g~~~~~~  311 (361)
T 3scy_A          238 FRYADGMLDEIQT------VAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLTGIHPRNF  311 (361)
T ss_dssp             EEEETTEEEEEEE------EESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEECSSCCCEE
T ss_pred             EEecCCceEEeEE------EecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecCCCCCceE
Confidence            9998532211000      1112233455789999999998876665  4899999985  444  34444344578899


Q ss_pred             EEccCCCeeeeccc
Q psy10867        327 FLGLLPPAIHDYDF  340 (343)
Q Consensus       327 ~~sp~~~~l~~~~~  340 (343)
                      +|+|||++|++++.
T Consensus       312 ~~spdg~~l~~~~~  325 (361)
T 3scy_A          312 IITPNGKYLLVACR  325 (361)
T ss_dssp             EECTTSCEEEEEET
T ss_pred             EECCCCCEEEEEEC
Confidence            99999999988763

>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...

Probab=99.94  E-value=7.8e-24  Score=174.63  Aligned_cols=282  Identities=12%  Similarity=0.092  Sum_probs=200.6

Q ss_pred             CCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEc----------CCCeEEEEeCCCcccceeccc------C
Q psy10867         14 SGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEK----------GKPMIQAWPVNSQEKAQLRLI------C   77 (343)
Q Consensus        14 dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~----------~~~~i~iw~~~~~~~~~~~~~------~   77 (343)
                      |+.|.+||..+++.+.++..+.. +  .++|+||++++.++.          .++.|.+||..+.+.+..+..      +
T Consensus        30 d~~v~v~D~~t~~~~~~i~~g~~-p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~  106 (361)
T 2oiz_A           30 ESRVHVYDYTNGKFLGMVPTAFN-G--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQG  106 (361)
T ss_dssp             GCEEEEEETTTCCEEEEEECCEE-E--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCB
T ss_pred             cCeEEEEECCCCeEEEEecCCCC-C--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCcccccc
Confidence            68999999999999998887764 4  999999998777764          246799999998877654432      1


Q ss_pred             CcceEEEEECCCCCEEEEe-c--CCeEEEEEccCCceEEE-ecccCCCeEEEEEecCC-CEEEEecCCCeEEEeecCc-c
Q psy10867         78 PGRISSMQASPDAAYIAVS-I--ETKLHMWQISSGRLLAT-ASSHYQPITIVKWSADS-NFIVTGGEDGTICVWQLSR-L  151 (343)
Q Consensus        78 ~~~v~~~~~s~~~~~l~~~-~--d~~i~v~~~~~~~~~~~-~~~~~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~~-~  151 (343)
                      ......++|+|||++|+++ .  ++.|.+||+.+++.+.. +.. . ....+.+.|++ ..+++.+.||.+.+|++.. +
T Consensus       107 g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~-~-~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g  184 (361)
T 2oiz_A          107 LNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAA-A-GCWSVIPQPNRPRSFMTICGDGGLLTINLGEDG  184 (361)
T ss_dssp             CCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGG-T-TEEEEEECTTSSSEEEEEETTSSEEEEEECTTS
T ss_pred             CCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecC-C-CcceeEEcCCCCeeEEEECCCCcEEEEEECCCC
Confidence            2346689999999998874 2  57999999999988877 543 2 23345677765 6778888999999999865 3


Q ss_pred             ceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceE--EEeec----
Q psy10867        152 ICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDL--LSLIL----  225 (343)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~--~~~~~----  225 (343)
                      +......                ....+.....++ .+.+++++  ..++..+.++.+.++|+......  ..+..    
T Consensus       185 ~~~~~~~----------------~~~~~~~~~~~~-~~~~~~~g--~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~  245 (361)
T 2oiz_A          185 KVASQSR----------------SKQMFSVKDDPI-FIAPALDK--DKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDE  245 (361)
T ss_dssp             SEEEEEE----------------CCCCSCTTTSCB-CSCCEECS--SEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHH
T ss_pred             cEeeecc----------------ccceEcCCCCce-EEEecccC--CEEEEEeCCCeEEEEEecCCCceecccccccCcc
Confidence            2221110                000111111221 23345666  45556667899999998755422  22211    


Q ss_pred             -------CCcEEEEEEcCCCCEEEEEcC-----------CCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEE
Q psy10867        226 -------DTRLTCVAFDGTEDNIYMGTS-----------EGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSC  287 (343)
Q Consensus       226 -------~~~i~~~~~~~~~~~l~~~~~-----------d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  287 (343)
                             ......++|+|+++.++++..           .+.|.+||+.+.+.           +..+..+.  +.+++|
T Consensus       246 ~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~-----------v~~i~~~~--p~~ia~  312 (361)
T 2oiz_A          246 DKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQR-----------VARIPGRD--ALSMTI  312 (361)
T ss_dssp             HHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEE-----------EEEEECTT--CCEEEE
T ss_pred             ccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcE-----------EEEEecCC--eeEEEE
Confidence                   111223789999998888643           34899999887554           33445555  899999


Q ss_pred             ccCCCEEEEEeCCCcEEEEecccc--eeeeecc-cCCceEEEEEccCCC
Q psy10867        288 SITGITLLSSSADETLKIWHTISR--QCLRTIQ-HKGPVLGAFLGLLPP  333 (343)
Q Consensus       288 s~~~~~l~s~~~dg~i~iwd~~~~--~~~~~~~-~~~~v~~~~~sp~~~  333 (343)
                      +|||++|++++. +.|.+||..++  +.+.++. .......++++|+|+
T Consensus       313 spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G~  360 (361)
T 2oiz_A          313 DQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPVGG  360 (361)
T ss_dssp             ETTTTEEEEECS-SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred             CCCCCEEEEeCC-CeEEEEECCCCcceeeEEeccCCCCcEEEEecCCCC
Confidence            999999998887 99999999999  9999974 777889999999986

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=99.93  E-value=1.7e-24  Score=182.77  Aligned_cols=230  Identities=10%  Similarity=0.061  Sum_probs=160.7

Q ss_pred             CeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEEecCCeEEEEEccCC----------ceEEE-----ecccCCCe
Q psy10867         58 PMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSG----------RLLAT-----ASSHYQPI  122 (343)
Q Consensus        58 ~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~----------~~~~~-----~~~~~~~v  122 (343)
                      +.+++|+....       .....++.+++++++.+++++....+++|+....          ..+..     ...+...|
T Consensus        23 ~~vri~~~~~~-------~~~~~~n~lavs~~~~~l~~~~~dgv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v   95 (434)
T 2oit_A           23 KKVRIFDSPEE-------LPKERSSLLAVSNKYGLVFAGGASGLQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPI   95 (434)
T ss_dssp             CEEECSCCCSS-------CCCSCCBCEEEETTTTEEEEEETTEEEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCE
T ss_pred             eeEEecCCccc-------cCCCCccEEEEecCCCEEEEECCCEEEEEEchHhhhhcccccCcccccccCccccccCCCcc
Confidence            46888764311       1234678999999999998855444999876421          01111     11356679


Q ss_pred             EEEEEecCCCEEE----EecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCce
Q psy10867        123 TIVKWSADSNFIV----TGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKS  198 (343)
Q Consensus       123 ~~~~~~~~~~~l~----s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~  198 (343)
                      .+++|+|++++|+    +++.|+.|++||+.+.......           ..........+.+|...|.+++|+|+.. .
T Consensus        96 ~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~-----------~~~~~~~~~~~~~h~~~V~~v~~~p~~~-~  163 (434)
T 2oit_A           96 HHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQ-----------QKRPFAYHKLLKDAGGMVIDMKWNPTVP-S  163 (434)
T ss_dssp             EEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCS-----------SCCCSEEEECCCSGGGSEEEEEECSSCT-T
T ss_pred             cEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcC-----------CcceeeeeeccCCCCCceEEEEECCCCC-C
Confidence            9999999999999    8899999999999764110000           0000013455677999999999999832 7


Q ss_pred             EEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCcccc
Q psy10867        199 RVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIG  277 (343)
Q Consensus       199 ~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~  277 (343)
                      +|++++.||+|++||++++....... |...+.+++|+|+|++|++|+.||.|++||++. ........    .......
T Consensus       164 ~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~~-~~~~~~~~----~~~~~~~  238 (434)
T 2oit_A          164 MVAVCLADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPTL-QEKKVIPC----PPFYESD  238 (434)
T ss_dssp             EEEEEETTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTTC-CEEEEECC----CTTCCTT
T ss_pred             EEEEEECCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccCC-cccccccC----CcccCCC
Confidence            99999999999999999886654443 677899999999999999999999999999872 21111100    0000113


Q ss_pred             ccCcEEEEEEccCCCEEEE-EeCCCc------EEEEecccc
Q psy10867        278 HEKQVTSLSCSITGITLLS-SSADET------LKIWHTISR  311 (343)
Q Consensus       278 ~~~~v~~~~~s~~~~~l~s-~~~dg~------i~iwd~~~~  311 (343)
                      |...+.+++|++++.++++ .+.||.      +++|++.+.
T Consensus       239 ~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~  279 (434)
T 2oit_A          239 HPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK  279 (434)
T ss_dssp             SCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred             CceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence            4558999999999887764 344433      899999764

>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...

Probab=99.93  E-value=3e-23  Score=187.29  Aligned_cols=310  Identities=10%  Similarity=0.041  Sum_probs=193.2

Q ss_pred             CCeEEEEecCCceEEEEEecCCCC--cc--eEEEEeCCceEEEEEcCC---------CeEEEEeCCCcccceecccCCcc
Q psy10867         14 SGAISVWEPKGGTLLMSYKGASVL--SP--HSMCLLGNDYVLGVEKGK---------PMIQAWPVNSQEKAQLRLICPGR   80 (343)
Q Consensus        14 dg~i~iwd~~~~~~~~~~~~~~~~--~v--~~~~~~~~~~~~~~~~~~---------~~i~iw~~~~~~~~~~~~~~~~~   80 (343)
                      ||.|++||+.+++....+.+|...  .+  ..++|||||+.++.+..+         +.+.+||+.+++... +..+...
T Consensus        35 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~-l~~~~~~  113 (740)
T 4a5s_A           35 ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLIT-EERIPNN  113 (740)
T ss_dssp             TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECC-SSCCCTT
T ss_pred             CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEE-cccCCCc
Confidence            799999999999988888887631  22  348899999888887764         566799999988654 4466778


Q ss_pred             eEEEEECCCCCEEEEecCCeEEEEEccCCceEEEe-cccCCCe-----------------EEEEEecCCCEEEEecCCC-
Q psy10867         81 ISSMQASPDAAYIAVSIETKLHMWQISSGRLLATA-SSHYQPI-----------------TIVKWSADSNFIVTGGEDG-  141 (343)
Q Consensus        81 v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~-~~~~~~v-----------------~~~~~~~~~~~l~s~~~dg-  141 (343)
                      +...+|||||+.||...++.|++|++.+++..+.. .++...+                 ..+.|+|||+.|+.++.|. 
T Consensus       114 ~~~~~~SPdG~~la~~~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~  193 (740)
T 4a5s_A          114 TQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDT  193 (740)
T ss_dssp             EEEEEECSSTTCEEEEETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECT
T ss_pred             ceeeEECCCCCEEEEEECCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEccc
Confidence            99999999999999888999999999888765432 2333323                 3489999999999876443 


Q ss_pred             eEEEeecCccc-------eeeeeecCCCCCCCCcc-----c-cc---cc--eeeeec------ccccceEEEEeecCCCc
Q psy10867        142 TICVWQLSRLI-------CKQTVAFGIPGSSGKGV-----T-GL---TE--PLHVKS------QHSLPVTHVTLSKLGAK  197 (343)
Q Consensus       142 ~i~iwd~~~~~-------~~~~~~~~~~~~~~~~~-----~-~~---~~--~~~~~~------~~~~~v~~~~~~~~~~~  197 (343)
                      .+.+|++....       ....+..+..+......     . ..   .+  ....+.      +|...+..++|+|++  
T Consensus       194 ~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg--  271 (740)
T 4a5s_A          194 EVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQE--  271 (740)
T ss_dssp             TCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETT--
T ss_pred             CCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCC--
Confidence            35555542111       01111111111110000     0 00   00  111122      377789999999999  


Q ss_pred             eEEEEee----CCCeEEEEecCCCc----e---EEE--eecCCcE-----EEEEEcCCCCEEE-EEc-CCC--cEEEEEe
Q psy10867        198 SRVASVS----HDRTCKIFDLCTGE----D---LLS--LILDTRL-----TCVAFDGTEDNIY-MGT-SEG--VIKSFCL  255 (343)
Q Consensus       198 ~~l~~~~----~d~~i~~wd~~~~~----~---~~~--~~~~~~i-----~~~~~~~~~~~l~-~~~-~d~--~i~i~d~  255 (343)
                      ++++...    .+..|++||+.+++    +   ...  -.+...+     ..+.|+|||+.++ ..+ .+|  .|++||+
T Consensus       272 ~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~  351 (740)
T 4a5s_A          272 RISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQI  351 (740)
T ss_dssp             EEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEET
T ss_pred             eEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEEC
Confidence            6555443    23479999999887    1   111  1233333     3688999999876 554 444  5777776


Q ss_pred             ecccccccccccCCCCCCccccccCcEEEEEEccCCCEEE-EEeC----CCcEEEE--ecccceeeeecc-----cCCce
Q psy10867        256 RQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLL-SSSA----DETLKIW--HTISRQCLRTIQ-----HKGPV  323 (343)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-s~~~----dg~i~iw--d~~~~~~~~~~~-----~~~~v  323 (343)
                      .....            ..+......+..+.. +|++.|+ +++.    .+...||  ++..++....+.     .....
T Consensus       352 ~~~~~------------~~lT~g~~~v~~~~~-~d~~~i~f~~~~~~~~~~~~~ly~v~~~g~~~~~~lt~~~~~~~~~~  418 (740)
T 4a5s_A          352 DKKDC------------TFITKGTWEVIGIEA-LTSDYLYYISNEYKGMPGGRNLYKIQLIDYTKVTCLSCELNPERCQY  418 (740)
T ss_dssp             TCSSC------------EESCCSSSCEEEEEE-ECSSEEEEEESCGGGCTTCBEEEEEETTEEEEEEESSTTTSTTTBCB
T ss_pred             CCCce------------EecccCCEEEEEEEE-EeCCEEEEEEecCCCCCceeEEEEEECCCCCcceeeccccCCCCCce
Confidence            64322            123333445555442 4466554 4443    2344454  554444332343     23578


Q ss_pred             EEEEEccCCCeeeecc
Q psy10867        324 LGAFLGLLPPAIHDYD  339 (343)
Q Consensus       324 ~~~~~sp~~~~l~~~~  339 (343)
                      ..+.|||++++++...
T Consensus       419 ~~~~~S~dg~~~~~~~  434 (740)
T 4a5s_A          419 YSVSFSKEAKYYQLRC  434 (740)
T ss_dssp             EEEEECTTSSEEEEEE
T ss_pred             EEEEECCCCCEEEEEe
Confidence            8999999999877544

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}

Probab=99.93  E-value=6.9e-25  Score=197.85  Aligned_cols=270  Identities=11%  Similarity=0.014  Sum_probs=184.9

Q ss_pred             eEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCc---ceEEEEECCCCCEEEEe-c---------CCeEEEEEc
Q psy10867         40 HSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPG---RISSMQASPDAAYIAVS-I---------ETKLHMWQI  106 (343)
Q Consensus        40 ~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~---~v~~~~~s~~~~~l~~~-~---------d~~i~v~~~  106 (343)
                      .+++|+|++.+++++. ++.|++||+.+++....+..+..   .+.+++|||||++|+.+ .         ++.|++||+
T Consensus        19 ~~~~~s~dg~~~~~~~-d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~   97 (719)
T 1z68_A           19 FFPNWISGQEYLHQSA-DNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDL   97 (719)
T ss_dssp             CCCEESSSSEEEEECT-TSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEET
T ss_pred             CccEECCCCeEEEEcC-CCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEEC
Confidence            4789999998877765 59999999999887766554433   38999999999999864 3         589999999


Q ss_pred             cCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccc-
Q psy10867        107 SSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLP-  185 (343)
Q Consensus       107 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  185 (343)
                      .+++.+... .....+..++|+|||+.|+.+. ++.|++|++.++........+             .....+.++... 
T Consensus        98 ~~g~~~~~~-~l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~-------------~~~~v~~g~~~~v  162 (719)
T 1z68_A           98 SNGEFVRGN-ELPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNG-------------RENKIFNGIPDWV  162 (719)
T ss_dssp             TTTEECCSS-CCCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCC-------------BTTTEEESSCCHH
T ss_pred             CCCccccce-ecCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCC-------------CcCCeEcccccce
Confidence            988762111 1135688999999999999886 689999999876543211000             000011222222 


Q ss_pred             --------eEEEEeecCCCceEEEEeeCCC----------------------------------eEEEEecCCCceE--E
Q psy10867        186 --------VTHVTLSKLGAKSRVASVSHDR----------------------------------TCKIFDLCTGEDL--L  221 (343)
Q Consensus       186 --------v~~~~~~~~~~~~~l~~~~~d~----------------------------------~i~~wd~~~~~~~--~  221 (343)
                              ..+++|+|+|  ++|++++.|.                                  .|++||+.+++..  .
T Consensus       163 ~~ee~~~~~~~~~wSPDG--~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~  240 (719)
T 1z68_A          163 YEEEMLATKYALWWSPNG--KFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQ  240 (719)
T ss_dssp             HHHHTTCSSCCEEECTTS--SEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCE
T ss_pred             eeeecccCcccEEECCCC--CEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCcccee
Confidence                    2589999999  7888877552                                  7899999888753  1


Q ss_pred             Ee-------ecCCcEEEEEEcCCCCEEEEEcCC----CcEEEEE----eecccccccccccCCCCCCcc----ccccCcE
Q psy10867        222 SL-------ILDTRLTCVAFDGTEDNIYMGTSE----GVIKSFC----LRQVPRTRDHHIQDSTSNPDF----IGHEKQV  282 (343)
Q Consensus       222 ~~-------~~~~~i~~~~~~~~~~~l~~~~~d----~~i~i~d----~~~~~~~~~~~~~~~~~~~~~----~~~~~~v  282 (343)
                      .+       .+...+..++|+||++++++....    ..|.+||    +.+...           ...+    .+|...+
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~-----------~~~~~~~~~~~~~~~  309 (719)
T 1z68_A          241 EVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDC-----------PKTQEHIEESRTGWA  309 (719)
T ss_dssp             ECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEEC-----------CGGGEEEEECSSSCS
T ss_pred             EccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCce-----------EEEEecccccCCceE
Confidence            22       145568999999998777764332    2488888    544332           1222    3456666


Q ss_pred             E-----EEEEccCCCEEEE--EeCCC--cEEEEecccceeeeecc-cCCceEEEEEccCCCeeeeccc
Q psy10867        283 T-----SLSCSITGITLLS--SSADE--TLKIWHTISRQCLRTIQ-HKGPVLGAFLGLLPPAIHDYDF  340 (343)
Q Consensus       283 ~-----~~~~s~~~~~l~s--~~~dg--~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~  340 (343)
                      .     .+.|+|||+.|+.  ...+|  .|++||+.+++ ...+. +...+..+.++ +++.|+..+.
T Consensus       310 ~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~-~~~lt~~~~~v~~~~~~-d~~~i~~~~~  375 (719)
T 1z68_A          310 GGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN-AIQITSGKWEAINIFRV-TQDSLFYSSN  375 (719)
T ss_dssp             SSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT-CEECSCSSSCEEEEEEE-CSSEEEEEES
T ss_pred             ccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc-eEecccCceEEEEEEEE-eCCEEEEEEe
Confidence            5     7899999996554  44555  57777877766 34444 55567787777 8887776543

>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1

Probab=99.92  E-value=4.2e-22  Score=165.04  Aligned_cols=265  Identities=10%  Similarity=0.022  Sum_probs=178.6

Q ss_pred             CeEEEEec--CCceEEE--EEe-cCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCC-Ccccceeccc-CCcceEEEEEC
Q psy10867         15 GAISVWEP--KGGTLLM--SYK-GASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVN-SQEKAQLRLI-CPGRISSMQAS   87 (343)
Q Consensus        15 g~i~iwd~--~~~~~~~--~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~-~~~~~~~~~~-~~~~v~~~~~s   87 (343)
                      +.|.+|++  .+++...  ... .... .+..++|+|+++++++++.+ .|.+|++. +++....... ..+.+..++|+
T Consensus        14 ~~i~~~~~d~~~g~l~~~~~~~~~~~~-~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~s   91 (365)
T 1jof_A           14 GAIFTVQFDDEKLTCKLIKRTEIPQDE-PISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDAD   91 (365)
T ss_dssp             CEEEEEEEETTTTEEEEEEEEECCTTC-CCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTT
T ss_pred             CcEEEEEEECCCCCEEEeeEEccCCCC-CCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEEC
Confidence            56887764  5665432  222 2333 67899999999888777774 99999987 6655432211 11235568999


Q ss_pred             CCCCE--EEEe--------------cCCeEEEEEcc-CCceEEEec----ccCCCeEEEEEecCCCEEEEec-CCCeEEE
Q psy10867         88 PDAAY--IAVS--------------IETKLHMWQIS-SGRLLATAS----SHYQPITIVKWSADSNFIVTGG-EDGTICV  145 (343)
Q Consensus        88 ~~~~~--l~~~--------------~d~~i~v~~~~-~~~~~~~~~----~~~~~v~~~~~~~~~~~l~s~~-~dg~i~i  145 (343)
                      |||++  ++++              .++.+.+|++. +++....+.    .+...+.+++|+|+|++++++. .++.|.+
T Consensus        92 pdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~  171 (365)
T 1jof_A           92 TNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWT  171 (365)
T ss_dssp             SCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEE
T ss_pred             CCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEE
Confidence            99994  4443              57899999997 466544443    2456789999999999888765 3679999


Q ss_pred             eecC-ccceeeeeecCCCCCCCCccccccceeeeec--ccccceEEEEeecCCCceEEEEee-CCCeEEEEecC--CCce
Q psy10867        146 WQLS-RLICKQTVAFGIPGSSGKGVTGLTEPLHVKS--QHSLPVTHVTLSKLGAKSRVASVS-HDRTCKIFDLC--TGED  219 (343)
Q Consensus       146 wd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~l~~~~-~d~~i~~wd~~--~~~~  219 (343)
                      |++. +++..                    .+....  .|...+..++|+|++  +++++++ .++.+.+|+++  +++.
T Consensus       172 ~~~~~~g~~~--------------------~~~~~~~~~~g~~p~~~~~spdg--~~l~v~~~~~~~v~v~~~~~~~g~~  229 (365)
T 1jof_A          172 HRKLASGEVE--------------------LVGSVDAPDPGDHPRWVAMHPTG--NYLYALMEAGNRICEYVIDPATHMP  229 (365)
T ss_dssp             EEECTTSCEE--------------------EEEEEECSSTTCCEEEEEECTTS--SEEEEEETTTTEEEEEEECTTTCCE
T ss_pred             EEECCCCCEE--------------------EeeeEecCCCCCCCCEeEECCCC--CEEEEEECCCCeEEEEEEeCCCCcE
Confidence            9998 54321                    111222  245678999999999  6776665 47899999765  5554


Q ss_pred             EE---Eee-cC------C-------cEEEEE-EcCCCCEEEEEcCCC------cEEEEEeecccccccccccCCCCCC-c
Q psy10867        220 LL---SLI-LD------T-------RLTCVA-FDGTEDNIYMGTSEG------VIKSFCLRQVPRTRDHHIQDSTSNP-D  274 (343)
Q Consensus       220 ~~---~~~-~~------~-------~i~~~~-~~~~~~~l~~~~~d~------~i~i~d~~~~~~~~~~~~~~~~~~~-~  274 (343)
                      ..   .+. .+      .       .+..++ |+|+|++|+++..+.      .|.+|++........        +. .
T Consensus       230 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~--------~~~~  301 (365)
T 1jof_A          230 VYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEK--------QLFL  301 (365)
T ss_dssp             EEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEE--------EEEE
T ss_pred             EEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEE--------eeee
Confidence            22   222 11      1       488999 999999998876432      899999963111110        00 1


Q ss_pred             cccccCcEEEEEEcc---CCCEEEEEeCC-CcEEEEecccc
Q psy10867        275 FIGHEKQVTSLSCSI---TGITLLSSSAD-ETLKIWHTISR  311 (343)
Q Consensus       275 ~~~~~~~v~~~~~s~---~~~~l~s~~~d-g~i~iwd~~~~  311 (343)
                      ...+...+..++|+|   ||++|++++.+ +.|++|++...
T Consensus       302 ~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~  342 (365)
T 1jof_A          302 SPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE  342 (365)
T ss_dssp             EECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred             eecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence            222344566789999   89999988764 89999998765

>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}

Probab=99.92  E-value=5.3e-24  Score=178.58  Aligned_cols=283  Identities=8%  Similarity=-0.080  Sum_probs=189.3

Q ss_pred             EEEecCCceEEEEEecCCCCc-----ceEEEEeCCceEEEEEcC---CCeEEEEeCCCcccceecccCCcceEEEEECCC
Q psy10867         18 SVWEPKGGTLLMSYKGASVLS-----PHSMCLLGNDYVLGVEKG---KPMIQAWPVNSQEKAQLRLICPGRISSMQASPD   89 (343)
Q Consensus        18 ~iwd~~~~~~~~~~~~~~~~~-----v~~~~~~~~~~~~~~~~~---~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~   89 (343)
                      ...|..+++.+..+..+.. .     +..++|+|||+.++....   +..|.+|++.+++.......+......+.|+||
T Consensus        13 ~~~d~~~g~~~~~l~~~~~-~~~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spd   91 (396)
T 3c5m_A           13 TFVDSDTQVKVTRLTPTDI-ICHRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTD   91 (396)
T ss_dssp             EEECTTTCCEEEECSCTTS-CEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTT
T ss_pred             eeecCCCCcceEEEecCCC-CccceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCC
Confidence            3458888888888876644 3     788999999987766543   237888899888765544333322334789999


Q ss_pred             CCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEE-------------------EEEecCCCEEEEe-----cCCCeEE
Q psy10867         90 AAYIAV-SIETKLHMWQISSGRLLATASSHYQPITI-------------------VKWSADSNFIVTG-----GEDGTIC  144 (343)
Q Consensus        90 ~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~-------------------~~~~~~~~~l~s~-----~~dg~i~  144 (343)
                      |+.|+. +.++.|++|++.+++.......+......                   +.|+|+++.++..     ..+..|.
T Consensus        92 g~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~  171 (396)
T 3c5m_A           92 ERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLI  171 (396)
T ss_dssp             SSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEE
T ss_pred             CCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEE
Confidence            999876 66778999999988776655544442222                   3456666665544     3566889


Q ss_pred             EeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeec-CCCceEEEEeeCC------CeEEEEecCCC
Q psy10867        145 VWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSK-LGAKSRVASVSHD------RTCKIFDLCTG  217 (343)
Q Consensus       145 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~l~~~~~d------~~i~~wd~~~~  217 (343)
                      +||+.+++.                       ..+..+...+..+.|+| ++  ..|+..+.+      ..|.+||+..+
T Consensus       172 ~~d~~~g~~-----------------------~~~~~~~~~~~~~~~sp~dg--~~l~~~~~~~~~~~~~~l~~~d~~~~  226 (396)
T 3c5m_A          172 KVDIETGEL-----------------------EVIHQDTAWLGHPIYRPFDD--STVGFCHEGPHDLVDARMWLVNEDGS  226 (396)
T ss_dssp             EEETTTCCE-----------------------EEEEEESSCEEEEEEETTEE--EEEEEEECSCSSSCSCCCEEEETTSC
T ss_pred             EEECCCCcE-----------------------EeeccCCcccccceECCCCC--CEEEEEecCCCCCCCceEEEEECCCC
Confidence            999887532                       12224566788999999 67  556555443      46889998766


Q ss_pred             ceEEEeec--CCcEEEEEEcCCCCEEEEEcCC-----CcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEcc-
Q psy10867        218 EDLLSLIL--DTRLTCVAFDGTEDNIYMGTSE-----GVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSI-  289 (343)
Q Consensus       218 ~~~~~~~~--~~~i~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-  289 (343)
                      +.......  ...+..++|+|+|++|+.++.+     +.|++||+.+.....         +..+.+    .. +.|+| 
T Consensus       227 ~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~---------l~~~~~----~~-~~~s~~  292 (396)
T 3c5m_A          227 NVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEE---------VMVMPP----CS-HLMSNF  292 (396)
T ss_dssp             CCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEE---------EEECCS----EE-EEEECS
T ss_pred             ceeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEE---------eeeCCC----CC-CCccCC
Confidence            54332222  2257889999999987776543     449999987643211         111111    22 88999 


Q ss_pred             CCCEEEEEe----------------CCCcEEEEecccceeeeecccCC-----------ceEEEEEccCCCeeeeccc
Q psy10867        290 TGITLLSSS----------------ADETLKIWHTISRQCLRTIQHKG-----------PVLGAFLGLLPPAIHDYDF  340 (343)
Q Consensus       290 ~~~~l~s~~----------------~dg~i~iwd~~~~~~~~~~~~~~-----------~v~~~~~sp~~~~l~~~~~  340 (343)
                      ||+++++++                .+..|++||+.+++......+..           .+..++|+|||+.|+..+.
T Consensus       293 dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~  370 (396)
T 3c5m_A          293 DGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSD  370 (396)
T ss_dssp             SSSEEEEEECCC----------CCCCCCEEEEEETTTTBCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEEC
T ss_pred             CCceEEEecCCcceeeccccccccCCCCcEEEEecccCceEEccCCCCccccccccccCCCCCceEccCCCeEEEEec
Confidence            999888754                34789999998877543222433           2567899999999887653

>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...

Probab=99.92  E-value=6.6e-23  Score=185.10  Aligned_cols=273  Identities=12%  Similarity=0.070  Sum_probs=182.9

Q ss_pred             cceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcc-----eEEEEECCCCCEEEEecC----------CeEE
Q psy10867         38 SPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGR-----ISSMQASPDAAYIAVSIE----------TKLH  102 (343)
Q Consensus        38 ~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~-----v~~~~~s~~~~~l~~~~d----------~~i~  102 (343)
                      ...+++|+||+.+++++  ++.|++||+.+++....+..|...     ...++|||||++|+.+.+          +.+.
T Consensus        18 ~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~   95 (740)
T 4a5s_A           18 KLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYD   95 (740)
T ss_dssp             CCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEE
T ss_pred             cccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEE
Confidence            45689999999999987  599999999999877666555432     244889999999987443          6788


Q ss_pred             EEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeeccc
Q psy10867        103 MWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQH  182 (343)
Q Consensus       103 v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (343)
                      +||+.+++.. .+..|.+.+...+|+|||+.|+.+. ++.|++|++.++...+...   .+          .....+.++
T Consensus        96 ~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~---~g----------~~~~~~~g~  160 (740)
T 4a5s_A           96 IYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITW---TG----------KEDIIYNGI  160 (740)
T ss_dssp             EEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCS---CC----------BTTTEEESB
T ss_pred             EEECCCCcEE-EcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcC---CC----------CccceecCc
Confidence            9999988754 4667788899999999999999885 6899999998765322100   00          000111122


Q ss_pred             c---------cceEEEEeecCCCceEEEEeeCC------------------------------------CeEEEEecCC-
Q psy10867        183 S---------LPVTHVTLSKLGAKSRVASVSHD------------------------------------RTCKIFDLCT-  216 (343)
Q Consensus       183 ~---------~~v~~~~~~~~~~~~~l~~~~~d------------------------------------~~i~~wd~~~-  216 (343)
                      .         .....+.|+|+|  +.|+.++.|                                    ..|++||+.+ 
T Consensus       161 ~~~v~~ee~~~~~~~~~wSpDg--~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~  238 (740)
T 4a5s_A          161 TDWVYEEEVFSAYSALWWSPNG--TFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSL  238 (740)
T ss_dssp             CCHHHHHHTSSSSBCEEECTTS--SEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSC
T ss_pred             ccccccchhcCCCcceEECCCC--CEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCC
Confidence            2         222458999999  677776432                                    1588899988 


Q ss_pred             --Cc--eEEEee-------cCCcEEEEEEcCCCCEEEEEcC----CCcEEEEEeeccc----ccccccccCCCCCCcc--
Q psy10867        217 --GE--DLLSLI-------LDTRLTCVAFDGTEDNIYMGTS----EGVIKSFCLRQVP----RTRDHHIQDSTSNPDF--  275 (343)
Q Consensus       217 --~~--~~~~~~-------~~~~i~~~~~~~~~~~l~~~~~----d~~i~i~d~~~~~----~~~~~~~~~~~~~~~~--  275 (343)
                        ++  ....+.       +...+..++|+|||+.++....    +..|++||+.+..    ...         ...+  
T Consensus       239 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~---------~~~l~~  309 (740)
T 4a5s_A          239 SSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLV---------ARQHIE  309 (740)
T ss_dssp             CSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECG---------GGCEEE
T ss_pred             CCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeE---------EEEeee
Confidence              73  222332       4456899999999997666432    3479999998764    111         1111  


Q ss_pred             ccccCcEE-----EEEEccCCCEEE-EEeC-C--CcEEEEecccceeeeecccCCceEEEEEccCCCeeeecc
Q psy10867        276 IGHEKQVT-----SLSCSITGITLL-SSSA-D--ETLKIWHTISRQCLRTIQHKGPVLGAFLGLLPPAIHDYD  339 (343)
Q Consensus       276 ~~~~~~v~-----~~~~s~~~~~l~-s~~~-d--g~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~  339 (343)
                      .+|...+.     .+.|+|||+.|+ ..+. +  ..|++||+.+++..........+..+. .+|++.|+..+
T Consensus       310 ~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~lT~g~~~v~~~~-~~d~~~i~f~~  381 (740)
T 4a5s_A          310 MSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTFITKGTWEVIGIE-ALTSDYLYYIS  381 (740)
T ss_dssp             ECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCEESCCSSSCEEEEE-EECSSEEEEEE
T ss_pred             ccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceEecccCCEEEEEEE-EEeCCEEEEEE
Confidence            23444443     678999999877 6653 3  368888987766554333445565543 24466655443

>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}

Probab=99.91  E-value=3e-22  Score=167.45  Aligned_cols=264  Identities=12%  Similarity=0.033  Sum_probs=179.9

Q ss_pred             EEEecCCCC--eEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEE
Q psy10867          7 VAFSYDGSG--AISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSM   84 (343)
Q Consensus         7 ~~~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~   84 (343)
                      ++|..+.+|  .|.+||+.+++......++.. .+..++|+||++.|+.+..++.|.+||+.+++.......+...+...
T Consensus        50 l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~-~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~  128 (388)
T 3pe7_A           50 LLFGGAFDGPWNYYLLDLNTQVATQLTEGRGD-NTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYG  128 (388)
T ss_dssp             EEEEECTTSSCEEEEEETTTCEEEECCCSSCB-CSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEE
T ss_pred             EEEEEcCCCCceEEEEeCCCCceEEeeeCCCC-CccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhccccc
Confidence            444444345  588899999988877777766 66678999999888888877899999999988766555555555444


Q ss_pred             E--ECCCCCEEEEe-----------------------cCCeEEEEEccCCceEEEecccCCCeEEEEEec-CCCEEEEec
Q psy10867         85 Q--ASPDAAYIAVS-----------------------IETKLHMWQISSGRLLATASSHYQPITIVKWSA-DSNFIVTGG  138 (343)
Q Consensus        85 ~--~s~~~~~l~~~-----------------------~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~  138 (343)
                      .  ++|+++++++.                       .+..|.+||+.+++... +..+...+..+.|+| +++.|+...
T Consensus       129 ~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~-l~~~~~~~~~~~~sp~dg~~l~~~~  207 (388)
T 3pe7_A          129 TWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTV-ILQENQWLGHPIYRPYDDSTVAFCH  207 (388)
T ss_dssp             EEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEE-EEEESSCEEEEEEETTEEEEEEEEE
T ss_pred             ceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEE-eecCCccccccEECCCCCCEEEEEE
Confidence            3  48999988841                       23689999999887544 445667789999999 999888776


Q ss_pred             CC------CeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccc--cceEEEEeecCCCceEEEEeeC-C---
Q psy10867        139 ED------GTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHS--LPVTHVTLSKLGAKSRVASVSH-D---  206 (343)
Q Consensus       139 ~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~l~~~~~-d---  206 (343)
                      .+      ..|.++|+....                       ...+..+.  ..+..++|+|++  +.|+..+. +   
T Consensus       208 ~~~~~~~~~~l~~~d~~~~~-----------------------~~~l~~~~~~~~~~~~~~spdg--~~l~~~~~~~~~~  262 (388)
T 3pe7_A          208 EGPHDLVDARMWLINEDGTN-----------------------MRKVKTHAEGESCTHEFWVPDG--SALVYVSYLKGSP  262 (388)
T ss_dssp             CSCTTTSSCSEEEEETTSCC-----------------------CEESCCCCTTEEEEEEEECTTS--SCEEEEEEETTCC
T ss_pred             ecCCCCCcceEEEEeCCCCc-----------------------eEEeeeCCCCcccccceECCCC--CEEEEEecCCCCC
Confidence            53      367777876542                       12222233  357788999999  55544332 2   


Q ss_pred             -CeEEEEecCCCceEEEeecCCc------EEEEEEcCCCCEEEEE---------cCCCcEEEEEeecccccccccccCCC
Q psy10867        207 -RTCKIFDLCTGEDLLSLILDTR------LTCVAFDGTEDNIYMG---------TSEGVIKSFCLRQVPRTRDHHIQDST  270 (343)
Q Consensus       207 -~~i~~wd~~~~~~~~~~~~~~~------i~~~~~~~~~~~l~~~---------~~d~~i~i~d~~~~~~~~~~~~~~~~  270 (343)
                       ..|++||+.+++..........      ...++|+|+|+.|+..         ..+..|++||+.+....         
T Consensus       263 ~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~---------  333 (388)
T 3pe7_A          263 DRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQH---------  333 (388)
T ss_dssp             CEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEEE---------
T ss_pred             cceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCceE---------
Confidence             2499999998875433222221      1123799999988764         45668999998764321         


Q ss_pred             CCCccccccC-----------cEEEEEEccCCCEEEEEe-CCCcEEEEecc
Q psy10867        271 SNPDFIGHEK-----------QVTSLSCSITGITLLSSS-ADETLKIWHTI  309 (343)
Q Consensus       271 ~~~~~~~~~~-----------~v~~~~~s~~~~~l~s~~-~dg~i~iwd~~  309 (343)
                         .+..+..           .+..++|+|||+.|+..+ .+|...+|.+.
T Consensus       334 ---~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~  381 (388)
T 3pe7_A          334 ---RVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLAT  381 (388)
T ss_dssp             ---EEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred             ---EeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEE
Confidence               1222333           467889999999887655 56777777553

>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}

Probab=99.90  E-value=2.7e-20  Score=151.63  Aligned_cols=275  Identities=9%  Similarity=-0.037  Sum_probs=198.1

Q ss_pred             CCeEEEEecCCceEEEEEec------CCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEEC
Q psy10867         14 SGAISVWEPKGGTLLMSYKG------ASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQAS   87 (343)
Q Consensus        14 dg~i~iwd~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s   87 (343)
                      ++.|.++|.++++....+..      ... .+..+++.. +++.++...++.|.+||..+++.+..+. .......++++
T Consensus        16 ~~~l~~~d~~t~~~~~~i~~~~n~~~lg~-~~~~i~~~~-~~lyv~~~~~~~v~viD~~t~~~~~~i~-~~~~p~~i~~~   92 (328)
T 3dsm_A           16 NATLSYYDPATCEVENEVFYRANGFKLGD-VAQSMVIRD-GIGWIVVNNSHVIFAIDINTFKEVGRIT-GFTSPRYIHFL   92 (328)
T ss_dssp             CBEEEEEETTTTEEECSHHHHHHSSCCBS-CEEEEEEET-TEEEEEEGGGTEEEEEETTTCCEEEEEE-CCSSEEEEEEE
T ss_pred             CceEEEEECCCCEEhhhhHhhhcCcccCc-cceEEEEEC-CEEEEEEcCCCEEEEEECcccEEEEEcC-CCCCCcEEEEe
Confidence            89999999999987765421      112 467788865 5555555666899999999998876553 34678899999


Q ss_pred             CCCCEEEEe-cCCeEEEEEccCCceEEEecccC-----CCeEEEEEecCCCEEEEec-CCCeEEEeecCccceeeeeecC
Q psy10867         88 PDAAYIAVS-IETKLHMWQISSGRLLATASSHY-----QPITIVKWSADSNFIVTGG-EDGTICVWQLSRLICKQTVAFG  160 (343)
Q Consensus        88 ~~~~~l~~~-~d~~i~v~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~  160 (343)
                      ++++++++. .++.|.+||+.+++....+....     .....+++ .+++.+++.. .++.|.++|+.+++....+.  
T Consensus        93 ~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~--  169 (328)
T 3dsm_A           93 SDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDKVVDELT--  169 (328)
T ss_dssp             ETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTEEEEEEE--
T ss_pred             CCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCeEEEEEE--
Confidence            999766665 78999999999998877665332     14556777 3444444443 48899999999876554332  


Q ss_pred             CCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCC----------CeEEEEecCCCceEEEeec--CCc
Q psy10867        161 IPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHD----------RTCKIFDLCTGEDLLSLIL--DTR  228 (343)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d----------~~i~~wd~~~~~~~~~~~~--~~~  228 (343)
                                           .......++++|++  +++++...+          +.|.++|..+++....+..  ...
T Consensus       170 ---------------------~g~~p~~i~~~~dG--~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~  226 (328)
T 3dsm_A          170 ---------------------IGIQPTSLVMDKYN--KMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDW  226 (328)
T ss_dssp             ---------------------CSSCBCCCEECTTS--EEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCC
T ss_pred             ---------------------cCCCccceEEcCCC--CEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCC
Confidence                                 12234678889988  666666554          7899999999988777764  346


Q ss_pred             EEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEcc-CCCEEEEE----eCCCcE
Q psy10867        229 LTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSI-TGITLLSS----SADETL  303 (343)
Q Consensus       229 i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~s~----~~dg~i  303 (343)
                      ...++++|+++.|+++..  .|.+||..+......         ..+..+......++++| +++++++.    ..++.|
T Consensus       227 p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~---------~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V  295 (328)
T 3dsm_A          227 PSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVR---------PFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIV  295 (328)
T ss_dssp             CEEEEECTTSCEEEEESS--SEEEEETTCSSCCSS---------CSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEE
T ss_pred             ceeEEEecCCCEEEEEcc--EEEEEECCCCceeee---------eeecCCCCceEEEEEcCCCCeEEEEcccccccCCEE
Confidence            899999999999998765  899999876543211         11111245788999999 55556665    578899


Q ss_pred             EEEecccceeeeecccCCceEEEEEc
Q psy10867        304 KIWHTISRQCLRTIQHKGPVLGAFLG  329 (343)
Q Consensus       304 ~iwd~~~~~~~~~~~~~~~v~~~~~s  329 (343)
                      .+||.. ++.+.++........++|-
T Consensus       296 ~v~d~~-g~~~~~i~~G~~P~~~~~~  320 (328)
T 3dsm_A          296 YRYSPQ-GKLIDEFYVGIIPGAFCWK  320 (328)
T ss_dssp             EEECTT-CCEEEEEEEEESEEEEEEE
T ss_pred             EEECCC-CCEEEEEEeccCcceEEEe
Confidence            999997 9999988855555666664

>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1

Probab=99.90  E-value=2.5e-21  Score=160.45  Aligned_cols=260  Identities=11%  Similarity=-0.003  Sum_probs=169.7

Q ss_pred             CeEEEEeC--CCcccceecc---cCCcceEEEEECCCCCEEEEecCCeEEEEEcc-CCceEEEeccc-CCCeEEEEEecC
Q psy10867         58 PMIQAWPV--NSQEKAQLRL---ICPGRISSMQASPDAAYIAVSIETKLHMWQIS-SGRLLATASSH-YQPITIVKWSAD  130 (343)
Q Consensus        58 ~~i~iw~~--~~~~~~~~~~---~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~-~~~~~~~~~~~-~~~v~~~~~~~~  130 (343)
                      +.|.+|++  .+++......   .....+..++|+||+++|+++..+.|.+|++. +++........ .+...+++|+|+
T Consensus        14 ~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spd   93 (365)
T 1jof_A           14 GAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMKKWSSFAVKSPTEIVHEASHPIGGHPRANDADTN   93 (365)
T ss_dssp             CEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBTEEEEEEEEETTEEEEEEEEECCSSGGGGCTTSC
T ss_pred             CcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccceEEEEEECCCCCEEEeeEeecCCCCccEEECCC
Confidence            46777654  4554332211   23346788999999998876433399999997 77665433211 123556899999


Q ss_pred             CCE--EEEec-------------CCCeEEEeecCc-cceeeeeecCCCCCCCCccccccceeeee-cccccceEEEEeec
Q psy10867        131 SNF--IVTGG-------------EDGTICVWQLSR-LICKQTVAFGIPGSSGKGVTGLTEPLHVK-SQHSLPVTHVTLSK  193 (343)
Q Consensus       131 ~~~--l~s~~-------------~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~  193 (343)
                      +++  ++++.             .+|.+.+|++.. +.....+                   ... ..+...+.+++|+|
T Consensus        94 g~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~-------------------~~~~~~~~~~~~~~~~sp  154 (365)
T 1jof_A           94 TRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNV-------------------QNYEYQENTGIHGMVFDP  154 (365)
T ss_dssp             CEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEE-------------------EEEECCTTCCEEEEEECT
T ss_pred             CCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceE-------------------eeEEeCCCCcceEEEECC
Confidence            994  55553             689999999974 3322211                   111 12456789999999


Q ss_pred             CCCceEEEEee-CCCeEEEEecC-CCceE--EEee---cCCcEEEEEEcCCCCEEEEEcC-CCcEEEEEeec--ccccc-
Q psy10867        194 LGAKSRVASVS-HDRTCKIFDLC-TGEDL--LSLI---LDTRLTCVAFDGTEDNIYMGTS-EGVIKSFCLRQ--VPRTR-  262 (343)
Q Consensus       194 ~~~~~~l~~~~-~d~~i~~wd~~-~~~~~--~~~~---~~~~i~~~~~~~~~~~l~~~~~-d~~i~i~d~~~--~~~~~-  262 (343)
                      ++  ++++++. .++.|++||+. +++..  ..+.   +...+..++|+|+|+++++++. ++.|.+|++..  ..... 
T Consensus       155 dG--~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~  232 (365)
T 1jof_A          155 TE--TYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYT  232 (365)
T ss_dssp             TS--SEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEE
T ss_pred             CC--CEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEc
Confidence            99  6666654 46899999998 67653  2333   2456899999999999988764 78999998763  21100 


Q ss_pred             cccccCCCCCCccccccC------cEEEEE-EccCCCEEEEEeCCC------cEEEEecc-cceeee---ecc-cCCceE
Q psy10867        263 DHHIQDSTSNPDFIGHEK------QVTSLS-CSITGITLLSSSADE------TLKIWHTI-SRQCLR---TIQ-HKGPVL  324 (343)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~------~v~~~~-~s~~~~~l~s~~~dg------~i~iwd~~-~~~~~~---~~~-~~~~v~  324 (343)
                      ...+..  ....+.+|..      .+..++ |+|||++|++++.+.      .|.+|++. +++...   ... +...+.
T Consensus       233 ~~~~~~--~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~  310 (365)
T 1jof_A          233 HHSFPL--IPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGH  310 (365)
T ss_dssp             EEEEES--SCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTT
T ss_pred             cceEEc--CCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcc
Confidence            000000  0001122332      588999 999999888765432      89999996 566543   233 445577


Q ss_pred             EEEEcc---CCCeeeeccc
Q psy10867        325 GAFLGL---LPPAIHDYDF  340 (343)
Q Consensus       325 ~~~~sp---~~~~l~~~~~  340 (343)
                      .++|+|   ||++|++++.
T Consensus       311 ~~a~sp~~~dg~~l~v~~~  329 (365)
T 1jof_A          311 SNAVSPCPWSDEWMAITDD  329 (365)
T ss_dssp             CCCEEECTTCTTEEEEECS
T ss_pred             cceecCCCcCCCEEEEEEc
Confidence            899999   8999998764

>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A

Probab=99.90  E-value=1.1e-21  Score=175.34  Aligned_cols=266  Identities=10%  Similarity=-0.001  Sum_probs=181.6

Q ss_pred             EEecCCCCcceEEEEeCCceEEEEE--cCCCeEEEEeCCCcccceecccCCcceE---------EEEEC--CCCCE-EEE
Q psy10867         30 SYKGASVLSPHSMCLLGNDYVLGVE--KGKPMIQAWPVNSQEKAQLRLICPGRIS---------SMQAS--PDAAY-IAV   95 (343)
Q Consensus        30 ~~~~~~~~~v~~~~~~~~~~~~~~~--~~~~~i~iw~~~~~~~~~~~~~~~~~v~---------~~~~s--~~~~~-l~~   95 (343)
                      .+.+|.. .+..+++++++.+++..  ..++...||....+...+.+..+...+.         ...|+  |||+. |+.
T Consensus        18 ~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~   96 (662)
T 3azo_A           18 LVASRSG-RPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVF   96 (662)
T ss_dssp             HHHHTCS-CCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEE
T ss_pred             HHhhcCC-ccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEE
Confidence            3556777 89999999998777777  5568899998544443444445555555         55555  99998 776


Q ss_pred             ec--CCeEEEEEcc--C-CceEEEecc-----cCCCeEEEEEecCCCEEEEecCC----------CeEEEeecCc-----
Q psy10867         96 SI--ETKLHMWQIS--S-GRLLATASS-----HYQPITIVKWSADSNFIVTGGED----------GTICVWQLSR-----  150 (343)
Q Consensus        96 ~~--d~~i~v~~~~--~-~~~~~~~~~-----~~~~v~~~~~~~~~~~l~s~~~d----------g~i~iwd~~~-----  150 (343)
                      +.  +..|.++++.  . ++ ...+..     |...+..++|+|||+.|++++.+          ..|++||+.+     
T Consensus        97 ~~~~~~~l~~~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  175 (662)
T 3azo_A           97 THFGDQRLYAFEPDAPGGAV-PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAAD  175 (662)
T ss_dssp             EBTTTCCEEEECTTSTTCCC-CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTC
T ss_pred             EECCCCeEEEEcCCCCCCCC-CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCcccc
Confidence            54  4567777765  2 44 445554     56678899999999999998876          5899999987     


Q ss_pred             -cceeeeeecCCCCCCCCccccccceeeeec-ccccceEEEEeecCCCceEEEEeeCC--------CeEEEEecC-CC--
Q psy10867        151 -LICKQTVAFGIPGSSGKGVTGLTEPLHVKS-QHSLPVTHVTLSKLGAKSRVASVSHD--------RTCKIFDLC-TG--  217 (343)
Q Consensus       151 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~l~~~~~d--------~~i~~wd~~-~~--  217 (343)
                       +.                       ...+. .+...+..++|+|+|  ++|+.++.+        ..|++||+. ++  
T Consensus       176 ~~~-----------------------~~~l~~~~~~~~~~~~~SpDG--~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~  230 (662)
T 3azo_A          176 RSA-----------------------VRELSDDAHRFVTGPRLSPDG--RQAVWLAWDHPRMPWEGTELKTARVTEDGRF  230 (662)
T ss_dssp             GGG-----------------------SEESSCSCSSEECCCEECTTS--SEEEEEEECTTCCTTTCEEEEEEEECTTSCE
T ss_pred             CCc-----------------------eeEEEecCCCcccCceECCCC--CEEEEEECCCCCCCCCCcEEEEEEECCCCcc
Confidence             42                       12223 445677889999999  788777654        479999998 56  


Q ss_pred             -ceEEEee-cCCcEEEEEEcCCCCEEEEEcCCC--cEEEEEeecccccccccccCCCCCCccccccC--------cEEEE
Q psy10867        218 -EDLLSLI-LDTRLTCVAFDGTEDNIYMGTSEG--VIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEK--------QVTSL  285 (343)
Q Consensus       218 -~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~--~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~--------~v~~~  285 (343)
                       +...... +...+..+.|+|||++++++..++  .|++||+........           ...+..        .+..+
T Consensus       231 ~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l-----------~~~~~~~~~p~w~~~~~~~  299 (662)
T 3azo_A          231 ADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQL-----------CRREEEFAGPLWTPGMRWF  299 (662)
T ss_dssp             EEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEES-----------SCCSSBSSCCCCSTTCCSE
T ss_pred             cccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeec-----------ccccccccCccccccCceE
Confidence             3333333 357899999999999888888888  455555433221110           011111        14568


Q ss_pred             EEccCCCEEEEEeCCCcEEEE--ecccceeeeecc-cCCceEEEEEccCCCeee
Q psy10867        286 SCSITGITLLSSSADETLKIW--HTISRQCLRTIQ-HKGPVLGAFLGLLPPAIH  336 (343)
Q Consensus       286 ~~s~~~~~l~s~~~dg~i~iw--d~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~  336 (343)
                      +|+|+++++++++. +.+++|  |+.+++ +..+. +.+.+..+ |++++..++
T Consensus       300 ~~~~~~~~~~~~~~-~~~~l~~~d~~~~~-~~~l~~~~~~~~~~-~s~~~~~~~  350 (662)
T 3azo_A          300 APLANGLIAVVHGK-GAAVLGILDPESGE-LVDAAGPWTEWAAT-LTVSGTRAV  350 (662)
T ss_dssp             EECTTSCEEEEEBS-SSCEEEEEETTTTE-EEECCSSCCEEEEE-EEEETTEEE
T ss_pred             eEeCCCEEEEEEEc-CccEEEEEECCCCc-EEEecCCCCeEEEE-EecCCCEEE
Confidence            99999999999998 999999  555555 56666 66667666 145555444

>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1

Probab=99.90  E-value=4.2e-20  Score=147.84  Aligned_cols=236  Identities=11%  Similarity=0.073  Sum_probs=174.8

Q ss_pred             cceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecc------cCCcceEEEEE-CCCCCEEEEec--CCeEEEEEccC
Q psy10867         38 SPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRL------ICPGRISSMQA-SPDAAYIAVSI--ETKLHMWQISS  108 (343)
Q Consensus        38 ~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~------~~~~~v~~~~~-s~~~~~l~~~~--d~~i~v~~~~~  108 (343)
                      .+.+++++|++.++++...++.|.+||.+ ++....+.      .+...+..+++ .++++++++..  ++.|.+|+ .+
T Consensus        31 ~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d-~~  108 (286)
T 1q7f_A           31 EPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN-QY  108 (286)
T ss_dssp             CEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC-TT
T ss_pred             CCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC-CC
Confidence            78999999999988888777999999987 44343332      23456889999 57888887753  78999999 56


Q ss_pred             CceEEEec-ccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceE
Q psy10867        109 GRLLATAS-SHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVT  187 (343)
Q Consensus       109 ~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  187 (343)
                      ++.+..+. .+...+.+++++|+++++++...++.|.+||.... ....+                    ....+...+.
T Consensus       109 g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~-~~~~~--------------------~~~~~~~~p~  167 (286)
T 1q7f_A          109 GQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGN-VLHKF--------------------GCSKHLEFPN  167 (286)
T ss_dssp             SCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSC-EEEEE--------------------ECTTTCSSEE
T ss_pred             CcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCC-EEEEe--------------------CCCCccCCcE
Confidence            77776664 34457899999999998888888899999996542 21111                    0113445689


Q ss_pred             EEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecC---CcEEEEEEcCCCCEEEEEcCCC-cEEEEEeeccccccc
Q psy10867        188 HVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILD---TRLTCVAFDGTEDNIYMGTSEG-VIKSFCLRQVPRTRD  263 (343)
Q Consensus       188 ~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~---~~i~~~~~~~~~~~l~~~~~d~-~i~i~d~~~~~~~~~  263 (343)
                      .+++++++  +++++...++.|++||. +++.+..+...   ..+..++++++|+++++...++ .|.+||... ..   
T Consensus       168 ~i~~~~~g--~l~v~~~~~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g-~~---  240 (286)
T 1q7f_A          168 GVVVNDKQ--EIFISDNRAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDG-QL---  240 (286)
T ss_dssp             EEEECSSS--EEEEEEGGGTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTS-CE---
T ss_pred             EEEECCCC--CEEEEECCCCEEEEEcC-CCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCC-CE---
Confidence            99999998  78888788999999996 56666666533   5689999999999888887776 999998542 11   


Q ss_pred             ccccCCCCCCccccc--cCcEEEEEEccCCCEEEEEeCCCcEEEEecccce
Q psy10867        264 HHIQDSTSNPDFIGH--EKQVTSLSCSITGITLLSSSADETLKIWHTISRQ  312 (343)
Q Consensus       264 ~~~~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~  312 (343)
                              +..+..+  ...+.+++++|+|+++++ +.|+.|++|++....
T Consensus       241 --------~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~~~  282 (286)
T 1q7f_A          241 --------ISALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQLA  282 (286)
T ss_dssp             --------EEEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSCCC
T ss_pred             --------EEEEcccCCCCcceeEEECCCCcEEEE-CCCCeEEEEEccccc
Confidence                    1122222  234789999999987777 679999999986543

>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*

Probab=99.89  E-value=2.1e-20  Score=152.45  Aligned_cols=250  Identities=10%  Similarity=0.011  Sum_probs=179.7

Q ss_pred             cceEEEEeCCceEEEEEcCC------------------------CeEEEEeCCCcccceecc-cCCcceEEEEECCCCCE
Q psy10867         38 SPHSMCLLGNDYVLGVEKGK------------------------PMIQAWPVNSQEKAQLRL-ICPGRISSMQASPDAAY   92 (343)
Q Consensus        38 ~v~~~~~~~~~~~~~~~~~~------------------------~~i~iw~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~   92 (343)
                      .+.+++++|+|+++++...+                        +.|.+||..+++...... .+......++++|+|++
T Consensus        25 ~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l  104 (329)
T 3fvz_A           25 QVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNY  104 (329)
T ss_dssp             CEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSCE
T ss_pred             CceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCCCE
Confidence            78999999999999888876                        479999998888765443 34457899999999998


Q ss_pred             EEEe-cCCeEEEEEccCCc-eEEEe---------cccCCCeEEEEEec-CCCEEEEec-CCCeEEEeecCccceeeeeec
Q psy10867         93 IAVS-IETKLHMWQISSGR-LLATA---------SSHYQPITIVKWSA-DSNFIVTGG-EDGTICVWQLSRLICKQTVAF  159 (343)
Q Consensus        93 l~~~-~d~~i~v~~~~~~~-~~~~~---------~~~~~~v~~~~~~~-~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~  159 (343)
                      +++. .++.|++|+..... .+..+         .++......++++| +++++++.+ .++.|++|+.. +.....+..
T Consensus       105 ~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~-g~~~~~~~~  183 (329)
T 3fvz_A          105 WVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPS-GKFVTQWGE  183 (329)
T ss_dssp             EEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTT-SCEEEEECE
T ss_pred             EEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCC-CCEEEEecc
Confidence            8874 57899999975442 44444         23445789999999 788888876 68999999954 433332210


Q ss_pred             CCCCCCCCccccccceeeeecccccceEEEEeecC-CCceEEEEeeCCCeEEEEecCCCceEEEee---cCCcEEEEEEc
Q psy10867        160 GIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKL-GAKSRVASVSHDRTCKIFDLCTGEDLLSLI---LDTRLTCVAFD  235 (343)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~---~~~~i~~~~~~  235 (343)
                      ....  .          ....++...+..++++|+ +  .++++...++.|++||..+++.+..+.   ....+..++++
T Consensus       184 ~g~~--~----------~~~~~~~~~p~gia~d~~~g--~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~  249 (329)
T 3fvz_A          184 ESSG--S----------SPRPGQFSVPHSLALVPHLD--QLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYI  249 (329)
T ss_dssp             ECCS--S----------SCCTTEESCEEEEEEETTTT--EEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEE
T ss_pred             CCCC--C----------CCCCcccCCCcEEEEECCCC--EEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeec
Confidence            0000  0          000123345789999998 6  788888889999999998899888875   34568899999


Q ss_pred             C------CCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecc
Q psy10867        236 G------TEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTI  309 (343)
Q Consensus       236 ~------~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~  309 (343)
                      |      +++..++...+..|++||+.+......+        ....++...+..++++|+|.++++...++.|++|++.
T Consensus       250 pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~--------~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~  321 (329)
T 3fvz_A          250 PGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVF--------KPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLT  321 (329)
T ss_dssp             TTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEE--------CCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEE
T ss_pred             CCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEE--------cCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCC
Confidence            9      3332222334558999998765443221        0113456778999999999888899999999999985


Q ss_pred             c
Q psy10867        310 S  310 (343)
Q Consensus       310 ~  310 (343)
                      .
T Consensus       322 ~  322 (329)
T 3fvz_A          322 E  322 (329)
T ss_dssp             E
T ss_pred             c
Confidence            4

>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A

Probab=99.88  E-value=2.7e-20  Score=152.31  Aligned_cols=272  Identities=8%  Similarity=-0.033  Sum_probs=189.1

Q ss_pred             cceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCCceEEEec
Q psy10867         38 SPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATAS  116 (343)
Q Consensus        38 ~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~  116 (343)
                      .+.+++|+|++..++....++.++.|   .++....+..+...+.+++|+|+++++++ ..++.|.+||..+++......
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~   83 (333)
T 2dg1_A            7 DLPTLFYSGKSNSAVPIISESELQTI---TAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFV   83 (333)
T ss_dssp             CCCBCCSCGGGGCSSCCCCGGGSCEE---ECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEE
T ss_pred             ccceeeecCCccceeEEeecccCccc---ccceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEee
Confidence            57788899887666555555788888   23334444456667899999999998776 467899999998887665544


Q ss_pred             ccCCCeEEEEEecCCCEEEEecCC----CeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEee
Q psy10867        117 SHYQPITIVKWSADSNFIVTGGED----GTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLS  192 (343)
Q Consensus       117 ~~~~~v~~~~~~~~~~~l~s~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  192 (343)
                      .+...+.+++++|+++++++...+    +.|.+||..+......+                    ....+...+..++++
T Consensus        84 ~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~--------------------~~~~~~~~~~~i~~d  143 (333)
T 2dg1_A           84 SHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDII--------------------EDLSTAYCIDDMVFD  143 (333)
T ss_dssp             CSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEE--------------------CSSSSCCCEEEEEEC
T ss_pred             CCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEE--------------------ccCccCCcccceEEC
Confidence            566789999999999988877666    68999998876432111                    001234578899999


Q ss_pred             cCCCceEEEEeeC------CCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEE-cCCCcEEEEEeecc-cccccc
Q psy10867        193 KLGAKSRVASVSH------DRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMG-TSEGVIKSFCLRQV-PRTRDH  264 (343)
Q Consensus       193 ~~~~~~~l~~~~~------d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~-~~~~~~  264 (343)
                      |++  .++++...      .+.|..+|..+++..........+..++|+|+++.|+++ ..++.|.+||+... ......
T Consensus       144 ~~g--~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~  221 (333)
T 2dg1_A          144 SKG--GFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPF  221 (333)
T ss_dssp             TTS--CEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEE
T ss_pred             CCC--CEEEEeccccccCCCceEEEEeCCCCEEEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccc
Confidence            998  66666543      366777776655544333334457899999999866554 56789999998642 111100


Q ss_pred             cccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc-cCC------ceEEEEEccCCCeeee
Q psy10867        265 HIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-HKG------PVLGAFLGLLPPAIHD  337 (343)
Q Consensus       265 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~------~v~~~~~sp~~~~l~~  337 (343)
                      .   ......+.++ ..+..++++++|+++++...++.|.+||. +++.+..+. +..      .+.+++|+||++.|+.
T Consensus       222 ~---~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v  296 (333)
T 2dg1_A          222 G---ATIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLII  296 (333)
T ss_dssp             E---EEEEEECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEE
T ss_pred             c---ceEEEecCCC-CCCCceEECCCCCEEEEEcCCCEEEEECC-CCCEEEEEEcCCCccccccCcceEEECCCCCEEEE
Confidence            0   0000011122 46788999999998888888899999998 566666665 322      6899999999887775


Q ss_pred             cc
Q psy10867        338 YD  339 (343)
Q Consensus       338 ~~  339 (343)
                      ++
T Consensus       297 ~~  298 (333)
T 2dg1_A          297 CS  298 (333)
T ss_dssp             EE
T ss_pred             Ee
Confidence            54

>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}

Probab=99.88  E-value=1.2e-20  Score=158.16  Aligned_cols=257  Identities=10%  Similarity=0.002  Sum_probs=171.1

Q ss_pred             CeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEE-----------
Q psy10867         15 GAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISS-----------   83 (343)
Q Consensus        15 g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~-----------   83 (343)
                      ..|.+||+.+++......++.. ....+.|+|||+.++....++.|.+|++.+++.......+......           
T Consensus        60 ~~l~~~d~~~~~~~~l~~~~~~-~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~  138 (396)
T 3c5m_A           60 RNYYLLNLETQQAVQLTEGKGD-NTFGGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTK  138 (396)
T ss_dssp             CEEEEEETTTTEEEECCCSSCB-CTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSE
T ss_pred             ceEEEEECCCCcEEEeecCCCC-ccccceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCc
Confidence            4788889988876554444433 3445889999988877777689999999988765544433332222           


Q ss_pred             --------EEECCCCCEEEE------ecCCeEEEEEccCCceEEEecccCCCeEEEEEec-CCCEEEEecCC------Ce
Q psy10867         84 --------MQASPDAAYIAV------SIETKLHMWQISSGRLLATASSHYQPITIVKWSA-DSNFIVTGGED------GT  142 (343)
Q Consensus        84 --------~~~s~~~~~l~~------~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~d------g~  142 (343)
                              +.|+|+++.++.      ..+..|++||+.+++..... .+...+..+.|+| +++.|+..+.+      ..
T Consensus       139 ~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~  217 (396)
T 3c5m_A          139 LVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIH-QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDAR  217 (396)
T ss_dssp             EEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEECSCSSSCSCC
T ss_pred             cccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeec-cCCcccccceECCCCCCEEEEEecCCCCCCCce
Confidence                    356788877664      24558999999988765544 4667789999999 78877766543      35


Q ss_pred             EEEeecCccceeeeeecCCCCCCCCccccccceeeeeccc--ccceEEEEeecCCCceEEEEeeCC-----CeEEEEecC
Q psy10867        143 ICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQH--SLPVTHVTLSKLGAKSRVASVSHD-----RTCKIFDLC  215 (343)
Q Consensus       143 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~l~~~~~d-----~~i~~wd~~  215 (343)
                      |.+||+.....                       ..+..+  ...+..++|+|++  +.|+.++.+     +.|++||+.
T Consensus       218 l~~~d~~~~~~-----------------------~~l~~~~~~~~~~~~~~spdg--~~l~~~~~~~~~~~~~l~~~d~~  272 (396)
T 3c5m_A          218 MWLVNEDGSNV-----------------------RKIKEHAEGESCTHEFWIPDG--SAMAYVSYFKGQTDRVIYKANPE  272 (396)
T ss_dssp             CEEEETTSCCC-----------------------EESSCCCTTEEEEEEEECTTS--SCEEEEEEETTTCCEEEEEECTT
T ss_pred             EEEEECCCCce-----------------------eEeeccCCCccccceEECCCC--CEEEEEecCCCCccceEEEEECC
Confidence            88888765421                       111112  2357889999999  666655443     559999998


Q ss_pred             CCceEEEeecCCcEEEEEEcC-CCCEEEEEc----------------CCCcEEEEEeecccccccccccCCCCCCccccc
Q psy10867        216 TGEDLLSLILDTRLTCVAFDG-TEDNIYMGT----------------SEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGH  278 (343)
Q Consensus       216 ~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~----------------~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~  278 (343)
                      +++......... .. +.|+| +++++++++                .+..|++||+......            .+..+
T Consensus       273 ~g~~~~l~~~~~-~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~------------~l~~~  338 (396)
T 3c5m_A          273 TLENEEVMVMPP-CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQ------------KLCKH  338 (396)
T ss_dssp             TCCEEEEEECCS-EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCC------------EEEEC
T ss_pred             CCCeEEeeeCCC-CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceE------------EccCC
Confidence            887654333332 33 89999 999888754                3478999998764321            12223


Q ss_pred             cC-----------cEEEEEEccCCCEEEEEeC-CCcEEEE--ecccce
Q psy10867        279 EK-----------QVTSLSCSITGITLLSSSA-DETLKIW--HTISRQ  312 (343)
Q Consensus       279 ~~-----------~v~~~~~s~~~~~l~s~~~-dg~i~iw--d~~~~~  312 (343)
                      ..           .+..++|+|||+.|+..+. ++...+|  ++.+++
T Consensus       339 ~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~~~~~  386 (396)
T 3c5m_A          339 STSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIADVPESY  386 (396)
T ss_dssp             CCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCTTC
T ss_pred             CCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEEEcccc
Confidence            22           2456789999998876664 5555555  444444

>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*

Probab=99.88  E-value=2e-18  Score=149.33  Aligned_cols=306  Identities=9%  Similarity=-0.001  Sum_probs=212.1

Q ss_pred             ceEEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCC--CcccceecccCCcceE
Q psy10867          5 NEVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVN--SQEKAQLRLICPGRIS   82 (343)
Q Consensus         5 ~~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~--~~~~~~~~~~~~~~v~   82 (343)
                      +.+.++..+++.|.++|..+++.+.++....  .+..+.|+|||+++.+++.++.|.+||+.  +.+.+..... .....
T Consensus       167 ~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~--~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~-G~~P~  243 (567)
T 1qks_A          167 NLFSVTLRDAGQIALIDGSTYEIKTVLDTGY--AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKI-GSEAR  243 (567)
T ss_dssp             GEEEEEETTTTEEEEEETTTCCEEEEEECSS--CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEEC-CSEEE
T ss_pred             ceEEEEeCCCCeEEEEECCCCeEEEEEeCCC--CccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEec-CCCCc
Confidence            3456677778999999999999999988655  67799999999888888888999999995  6665544433 33467


Q ss_pred             EEEEC----CCCCEEEEe--cCCeEEEEEccCCceEEEecc----------cCC-CeEEEEEecCCC-EEEEecCCCeEE
Q psy10867         83 SMQAS----PDAAYIAVS--IETKLHMWQISSGRLLATASS----------HYQ-PITIVKWSADSN-FIVTGGEDGTIC  144 (343)
Q Consensus        83 ~~~~s----~~~~~l~~~--~d~~i~v~~~~~~~~~~~~~~----------~~~-~v~~~~~~~~~~-~l~s~~~dg~i~  144 (343)
                      .++|+    |||++++++  .++.|.++|..+.+.+..+..          |.. .+..+..++++. +++....+|.|.
T Consensus       244 ~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~  323 (567)
T 1qks_A          244 SIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKIL  323 (567)
T ss_dssp             EEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEE
T ss_pred             eeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEE
Confidence            99999    699988863  568999999999988877642          112 577888888755 455556779999


Q ss_pred             EeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEE-EeeCCCeEEEEecCCCceEEEe
Q psy10867        145 VWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVA-SVSHDRTCKIFDLCTGEDLLSL  223 (343)
Q Consensus       145 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~-~~~~d~~i~~wd~~~~~~~~~~  223 (343)
                      ++|........                    +... ........+.|+|++  ++++ +...++.|.++|+.+++.+..+
T Consensus       324 ~vd~~~~~~~~--------------------v~~i-~~~~~~~d~~~~pdg--r~~~va~~~sn~V~ViD~~t~kl~~~i  380 (567)
T 1qks_A          324 LVDYTDLNNLK--------------------TTEI-SAERFLHDGGLDGSH--RYFITAANARNKLVVIDTKEGKLVAIE  380 (567)
T ss_dssp             EEETTCSSEEE--------------------EEEE-ECCSSEEEEEECTTS--CEEEEEEGGGTEEEEEETTTTEEEEEE
T ss_pred             EEecCCCccce--------------------eeee-eccccccCceECCCC--CEEEEEeCCCCeEEEEECCCCcEEEEE
Confidence            99987653211                    1111 233456688999999  5554 4556889999999999887766


Q ss_pred             ec-CCcE---EEEE-EcCCCCEEE-EEc-CCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEE
Q psy10867        224 IL-DTRL---TCVA-FDGTEDNIY-MGT-SEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLS  296 (343)
Q Consensus       224 ~~-~~~i---~~~~-~~~~~~~l~-~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s  296 (343)
                      .. ....   ..+. ++|++..++ ++. .++.|.++|.........    ..+.+..+......-..+..+|++++|.+
T Consensus       381 ~vgg~~Phpg~g~~~~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~----~~kvv~~i~~~g~g~~~i~~~p~~~~l~v  456 (567)
T 1qks_A          381 DTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDPEGHPDN----AWKILDSFPALGGGSLFIKTHPNSQYLYV  456 (567)
T ss_dssp             ECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTT----BTSEEEEEECSCSCCCCEECCTTCSEEEE
T ss_pred             eccCcCCCCccceeeECCCCCcEEEeCCCCCCeEEEecCCCCCCccc----cCEEEEEEecCCCCCEEEEeCCCCCeEEE
Confidence            54 2111   1222 688755554 443 468999999886321100    01113333333233344778999998887


Q ss_pred             EeC-------CCcEEEEecccc-----ee-eeecc---------cCCceEEEEEccCCCeeeeccc
Q psy10867        297 SSA-------DETLKIWHTISR-----QC-LRTIQ---------HKGPVLGAFLGLLPPAIHDYDF  340 (343)
Q Consensus       297 ~~~-------dg~i~iwd~~~~-----~~-~~~~~---------~~~~v~~~~~sp~~~~l~~~~~  340 (343)
                      ...       .+.|.++|+.+.     .. +..+.         ....+..+.|+|+|+++..+..
T Consensus       457 ~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~  522 (567)
T 1qks_A          457 DATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVW  522 (567)
T ss_dssp             ECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEE
T ss_pred             ecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeECCCCCEEEEEee
Confidence            663       359999999877     21 12221         2457899999999999988743

>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A

Probab=99.88  E-value=1.8e-20  Score=167.50  Aligned_cols=268  Identities=11%  Similarity=-0.049  Sum_probs=178.5

Q ss_pred             CCCCeEEEEecCCceEEEEEecCCCCcce---------EEEEe--CCceE-EEEEcC-CCeEEEEeCC--C-cccceecc
Q psy10867         12 DGSGAISVWEPKGGTLLMSYKGASVLSPH---------SMCLL--GNDYV-LGVEKG-KPMIQAWPVN--S-QEKAQLRL   75 (343)
Q Consensus        12 ~~dg~i~iwd~~~~~~~~~~~~~~~~~v~---------~~~~~--~~~~~-~~~~~~-~~~i~iw~~~--~-~~~~~~~~   75 (343)
                      +.++...||....+.....+..+.. .+.         ...|+  |||+. ++.+.+ +..|.++++.  + ++.. .+.
T Consensus        44 ~~~~~~~l~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~~~-~l~  121 (662)
T 3azo_A           44 AEAGRATLVRRRADGAEESALPAPW-NVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAVPR-PLT  121 (662)
T ss_dssp             TTTTEEEEEEECTTSCEEESSCTTC-CBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCCCE-ECS
T ss_pred             ccCCcEEEEEECCCCCcceeCCCCc-cccccccccCCccceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCCCE-ecc
Confidence            3467889998655555666766665 555         66666  99876 655543 4667777776  3 4433 333


Q ss_pred             c-----CCcceEEEEECCCCCEEEE-ecC----------CeEEEEEccC------CceEEEec-ccCCCeEEEEEecCCC
Q psy10867         76 I-----CPGRISSMQASPDAAYIAV-SIE----------TKLHMWQISS------GRLLATAS-SHYQPITIVKWSADSN  132 (343)
Q Consensus        76 ~-----~~~~v~~~~~s~~~~~l~~-~~d----------~~i~v~~~~~------~~~~~~~~-~~~~~v~~~~~~~~~~  132 (343)
                      .     +...+..++|+|||+.|+. +.+          ..|++||+.+      ++.. .+. .+...+..++|+|||+
T Consensus       122 ~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~SpDG~  200 (662)
T 3azo_A          122 PVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVR-ELSDDAHRFVTGPRLSPDGR  200 (662)
T ss_dssp             CCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSE-ESSCSCSSEECCCEECTTSS
T ss_pred             CCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCcee-EEEecCCCcccCceECCCCC
Confidence            3     5678899999999998886 444          4899999987      5544 444 5556788899999999


Q ss_pred             EEEEecCC--------CeEEEeecC-ccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEe
Q psy10867        133 FIVTGGED--------GTICVWQLS-RLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASV  203 (343)
Q Consensus       133 ~l~s~~~d--------g~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~  203 (343)
                      +|+.++.+        ..|.+||+. ++....                   .......+...+..+.|+|++  ++++++
T Consensus       201 ~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~-------------------~~~l~~~~~~~~~~~~~spdg--~l~~~~  259 (662)
T 3azo_A          201 QAVWLAWDHPRMPWEGTELKTARVTEDGRFAD-------------------TRTLLGGPEEAIAQAEWAPDG--SLIVAT  259 (662)
T ss_dssp             EEEEEEECTTCCTTTCEEEEEEEECTTSCEEE-------------------EEEEEEETTBCEEEEEECTTS--CEEEEE
T ss_pred             EEEEEECCCCCCCCCCcEEEEEEECCCCcccc-------------------cEEeCCCCCceEcceEECCCC--eEEEEE
Confidence            99887754        479999998 441100                   222333456789999999999  677788


Q ss_pred             eCCC--eEEEEecCCCceEEEeecCCc---------EEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCC
Q psy10867        204 SHDR--TCKIFDLCTGEDLLSLILDTR---------LTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSN  272 (343)
Q Consensus       204 ~~d~--~i~~wd~~~~~~~~~~~~~~~---------i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~  272 (343)
                      ..++  .|.+||+.+++......+...         +..++|+|++++++++.. +.+++|.+......          +
T Consensus       260 ~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~----------~  328 (662)
T 3azo_A          260 DRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGE----------L  328 (662)
T ss_dssp             CTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTE----------E
T ss_pred             CCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCc----------E
Confidence            8888  677777767665443332221         467899999999999998 99999965532110          2


Q ss_pred             CccccccCcEEEE-EEccCCCEEEEEeCCC--cEEEEecccceee
Q psy10867        273 PDFIGHEKQVTSL-SCSITGITLLSSSADE--TLKIWHTISRQCL  314 (343)
Q Consensus       273 ~~~~~~~~~v~~~-~~s~~~~~l~s~~~dg--~i~iwd~~~~~~~  314 (343)
                      ..+..|...+..+ +++++.-++++++.+.  .|.++|+.+++..
T Consensus       329 ~~l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~  373 (662)
T 3azo_A          329 VDAAGPWTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGRAR  373 (662)
T ss_dssp             EECCSSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCCEE
T ss_pred             EEecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCceE
Confidence            2344566667766 4443333444555554  4556676666543

>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A

Probab=99.88  E-value=3.3e-19  Score=145.86  Aligned_cols=253  Identities=10%  Similarity=0.003  Sum_probs=173.8

Q ss_pred             CCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEE
Q psy10867         14 SGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYI   93 (343)
Q Consensus        14 dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l   93 (343)
                      ++.++.|   .++....+..+.. .+.+++|+|++.+++++..++.|.+||.++++.......+...+.+++++|+++++
T Consensus        26 ~~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~  101 (333)
T 2dg1_A           26 ESELQTI---TAEPWLEISKKGL-QLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLF  101 (333)
T ss_dssp             GGGSCEE---ECEEEEEEESSCC-CEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEE
T ss_pred             cccCccc---ccceeEEEeccCc-cccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEE
Confidence            5667778   4566677777766 78999999999988888877999999998877655443556789999999999988


Q ss_pred             EEec-C----CeEEEEEccCCceEEEec--ccCCCeEEEEEecCCCEEEEecC------CCeEEEeecCccceeeeeecC
Q psy10867         94 AVSI-E----TKLHMWQISSGRLLATAS--SHYQPITIVKWSADSNFIVTGGE------DGTICVWQLSRLICKQTVAFG  160 (343)
Q Consensus        94 ~~~~-d----~~i~v~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~s~~~------dg~i~iwd~~~~~~~~~~~~~  160 (343)
                      ++.. +    +.|.+||.+++.....+.  .+...+.+++++|+++++++...      .+.|..+|..+....      
T Consensus       102 v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~------  175 (333)
T 2dg1_A          102 VCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVT------  175 (333)
T ss_dssp             EEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEE------
T ss_pred             EEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEE------
Confidence            8754 3    589999998877653333  24457899999999988777654      355666665543211      


Q ss_pred             CCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCC-CceEEEe------ec--CCcEEE
Q psy10867        161 IPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCT-GEDLLSL------IL--DTRLTC  231 (343)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~-~~~~~~~------~~--~~~i~~  231 (343)
                                       .+......+..++|+|++. .++++.+.++.|.+||+++ ++....+      ..  ...+..
T Consensus       176 -----------------~~~~~~~~~~~i~~~~dg~-~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~  237 (333)
T 2dg1_A          176 -----------------PIIQNISVANGIALSTDEK-VLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDS  237 (333)
T ss_dssp             -----------------EEEEEESSEEEEEECTTSS-EEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEE
T ss_pred             -----------------EeecCCCcccceEECCCCC-EEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCc
Confidence                             1112334578899999982 2445556688999999864 3333211      11  236788


Q ss_pred             EEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCC
Q psy10867        232 VAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSAD  300 (343)
Q Consensus       232 ~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d  300 (343)
                      ++++++|+++++...++.|.+||... .....+..     .....+|...+.+++|+||++.|+.++.+
T Consensus       238 i~~d~~G~l~v~~~~~~~v~~~d~~g-~~~~~~~~-----~~~~~g~~~~~~~~~~~~dg~~L~v~~~~  300 (333)
T 2dg1_A          238 CCIDSDDNLYVAMYGQGRVLVFNKRG-YPIGQILI-----PGRDEGHMLRSTHPQFIPGTNQLIICSND  300 (333)
T ss_dssp             EEEBTTCCEEEEEETTTEEEEECTTS-CEEEEEEC-----TTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred             eEECCCCCEEEEEcCCCEEEEECCCC-CEEEEEEc-----CCCccccccCcceEEECCCCCEEEEEeCc
Confidence            99999999887777788999998742 22111100     00001222368899999998777655554

>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}

Probab=99.87  E-value=2.7e-19  Score=147.25  Aligned_cols=240  Identities=10%  Similarity=0.078  Sum_probs=162.8

Q ss_pred             CCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCC---C--eEEEEeCCCcccceecccCCcceEEEEECC
Q psy10867         14 SGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGK---P--MIQAWPVNSQEKAQLRLICPGRISSMQASP   88 (343)
Q Consensus        14 dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~---~--~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~   88 (343)
                      ++.|.+||+.+++... +    . .+..++|+|||+.++....+   +  .|.+|++.+++....... .. +..++|+|
T Consensus        42 ~~~l~~~d~~~~~~~~-l----~-~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~-~~-~~~~~wsp  113 (347)
T 2gop_A           42 ENTIVIENLKNNARRF-I----E-NATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEA-KN-IRSLEWNE  113 (347)
T ss_dssp             EEEEEEEETTTCCEEE-E----E-SCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEE-SE-EEEEEECT
T ss_pred             cceEEEEeCCCCceEE-c----c-cCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcC-CC-ccceeECC
Confidence            5689999998876533 3    3 77899999999777665432   2  478888888776554433 33 99999999


Q ss_pred             CCCEEEEe-cC---------------------------CeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCC
Q psy10867         89 DAAYIAVS-IE---------------------------TKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGED  140 (343)
Q Consensus        89 ~~~~l~~~-~d---------------------------~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d  140 (343)
                      ||+.|+.. .+                           ..|++||+.+++.+..+.. . .+..+.|+|++ +++++..+
T Consensus       114 dg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~  190 (347)
T 2gop_A          114 DSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHR  190 (347)
T ss_dssp             TSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEECC
T ss_pred             CCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-EEEEEecc
Confidence            99988863 22                           4799999988876455544 3 78899999999 77777554


Q ss_pred             C-------eEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCC-------
Q psy10867        141 G-------TICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHD-------  206 (343)
Q Consensus       141 g-------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d-------  206 (343)
                      +       ...+|.+.++.                       ...+..+ ..+..+  +|++  +.|+.++.+       
T Consensus       191 ~~~~~~~~~~~l~~~d~~~-----------------------~~~l~~~-~~~~~~--spdg--~~l~~~~~~~~~~~~~  242 (347)
T 2gop_A          191 EIIPQYFKFWDIYIWEDGK-----------------------EEKMFEK-VSFYAV--DSDG--ERILLYGKPEKKYMSE  242 (347)
T ss_dssp             CSSCCSSCCEEEEEEETTE-----------------------EEEEEEE-ESEEEE--EECS--SCEEEEECCSSSCCCS
T ss_pred             cccccccccccEEEeCCCc-----------------------eEEeccC-cceeeE--CCCC--CEEEEEEccccCCccc
Confidence            2       34445443321                       1112223 444444  8998  667666543       


Q ss_pred             -CeEEEEecCCCceEEEee-cCCcEEE-EEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEE
Q psy10867        207 -RTCKIFDLCTGEDLLSLI-LDTRLTC-VAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVT  283 (343)
Q Consensus       207 -~~i~~wd~~~~~~~~~~~-~~~~i~~-~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  283 (343)
                       ..|.+||  +++...... +...+.. +.|+ ++ .+++++.++.+++| +... .           ...+..+...|.
T Consensus       243 ~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g-~-----------~~~~~~~~~~v~  305 (347)
T 2gop_A          243 HNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDG-E-----------IKPIAKGRHWIM  305 (347)
T ss_dssp             SCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESS-S-----------EEEEECSSSEEE
T ss_pred             cceEEEEC--CCceEeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCC-c-----------eEEEecCCCeEE
Confidence             4688888  555433222 3556776 8999 88 88889999999999 8732 1           112333467899


Q ss_pred             EEEEccCCCEEEEEeCCCcE-EEEecccce
Q psy10867        284 SLSCSITGITLLSSSADETL-KIWHTISRQ  312 (343)
Q Consensus       284 ~~~~s~~~~~l~s~~~dg~i-~iwd~~~~~  312 (343)
                      +++|+|  .++++++.++.. .+|.+. ++
T Consensus       306 ~~~~s~--~~~~~~~~~~~~~~l~~~~-g~  332 (347)
T 2gop_A          306 GFDVDE--IVVYLKETATRLRELFTWD-GE  332 (347)
T ss_dssp             EEEESS--SEEEEEECSSSCCEEEEES-SS
T ss_pred             eeeeeC--cEEEEEcCCCChHHheEeC-Cc
Confidence            999999  677777777665 777776 54

>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...

Probab=99.86  E-value=1.1e-19  Score=149.85  Aligned_cols=255  Identities=10%  Similarity=0.009  Sum_probs=171.6

Q ss_pred             CCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEEec-----------CCeEEEEEccCCceEEEeccc------C
Q psy10867         57 KPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSI-----------ETKLHMWQISSGRLLATASSH------Y  119 (343)
Q Consensus        57 ~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-----------d~~i~v~~~~~~~~~~~~~~~------~  119 (343)
                      |+.|.+||..+++.+..+..+..+  .++|+||+++++++.           ++.|.+||+.+++.+..+...      .
T Consensus        30 d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g  107 (361)
T 2oiz_A           30 ESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGL  107 (361)
T ss_dssp             GCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBC
T ss_pred             cCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccC
Confidence            579999999998877665555444  899999999888742           467999999999888777532      2


Q ss_pred             CCeEEEEEecCCCEEEEecC--CCeEEEeecCccceeee-eecCCCCCCCCccccccceeeeecccccceEEEEeecCCC
Q psy10867        120 QPITIVKWSADSNFIVTGGE--DGTICVWQLSRLICKQT-VAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGA  196 (343)
Q Consensus       120 ~~v~~~~~~~~~~~l~s~~~--dg~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  196 (343)
                      .....++++|++++|+++..  ++.|.+||+.+.+.... +.                       .. ....+.+.|++.
T Consensus       108 ~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~-----------------------~~-~~~~v~~~p~~~  163 (361)
T 2oiz_A          108 NYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTA-----------------------AA-GCWSVIPQPNRP  163 (361)
T ss_dssp             CCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGG-----------------------GT-TEEEEEECTTSS
T ss_pred             CCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEec-----------------------CC-CcceeEEcCCCC
Confidence            45678999999999998864  58999999998754433 21                       11 122355677764


Q ss_pred             ceEEEEeeCCCeEEEEecCC-CceEEEe------ecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCC
Q psy10867        197 KSRVASVSHDRTCKIFDLCT-GEDLLSL------ILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDS  269 (343)
Q Consensus       197 ~~~l~~~~~d~~i~~wd~~~-~~~~~~~------~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~  269 (343)
                       ..+++.+.||.+.+|++.. ++.....      ........+.++|++..++..+.++.|.++|+..............
T Consensus       164 -~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~  242 (361)
T 2oiz_A          164 -RSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLL  242 (361)
T ss_dssp             -SEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESC
T ss_pred             -eeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceeccccccc
Confidence             5778888999999998865 5444221      1111122334467777777778889999999864321100000000


Q ss_pred             CC-CCccccccCcEEEEEEccCCCEEEEEeC-----------CCcEEEEecccceeeeecccCCceEEEEEccCCCeeee
Q psy10867        270 TS-NPDFIGHEKQVTSLSCSITGITLLSSSA-----------DETLKIWHTISRQCLRTIQHKGPVLGAFLGLLPPAIHD  337 (343)
Q Consensus       270 ~~-~~~~~~~~~~v~~~~~s~~~~~l~s~~~-----------dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~  337 (343)
                      .. .............++|+|+++.++.+..           .+.|.+||+.+++.+.++.... +.+++|+|||++|++
T Consensus       243 ~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~-p~~ia~spdg~~l~v  321 (361)
T 2oiz_A          243 NDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD-ALSMTIDQQRNLMLT  321 (361)
T ss_dssp             CHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT-CCEEEEETTTTEEEE
T ss_pred             CccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC-eeEEEECCCCCEEEE
Confidence            00 0000000111123789999887776543           3479999999999999998444 999999999999998


Q ss_pred             cc
Q psy10867        338 YD  339 (343)
Q Consensus       338 ~~  339 (343)
                      ++
T Consensus       322 ~n  323 (361)
T 2oiz_A          322 LD  323 (361)
T ss_dssp             EC
T ss_pred             eC
Confidence            76

>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*

Probab=99.86  E-value=2.2e-18  Score=140.52  Aligned_cols=220  Identities=10%  Similarity=0.093  Sum_probs=166.5

Q ss_pred             CeEEEEecCCceEEEEEec-CCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcc-cceec---------ccCCcceEE
Q psy10867         15 GAISVWEPKGGTLLMSYKG-ASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQE-KAQLR---------LICPGRISS   83 (343)
Q Consensus        15 g~i~iwd~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~-~~~~~---------~~~~~~v~~   83 (343)
                      +.|.+||..+++.+..+.. +.. .+..++++|+|.++++...++.|++|+.+... .+..+         ..+......
T Consensus        69 ~~i~~~d~~~g~~~~~~~~~~~~-~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~  147 (329)
T 3fvz_A           69 DTILVIDPNNAEILQSSGKNLFY-LPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTD  147 (329)
T ss_dssp             CCEEEECTTTCCEEEEECTTTCS-SEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEE
T ss_pred             CcEEEEECCCCeEEeccCCCccC-CceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcE
Confidence            3699999988998877653 334 78999999999999998888999999986552 23322         233446899


Q ss_pred             EEECC-CCCEEEEe--cCCeEEEEEccCCceEEEeccc----------CCCeEEEEEecC-CCEEEEecCCCeEEEeecC
Q psy10867         84 MQASP-DAAYIAVS--IETKLHMWQISSGRLLATASSH----------YQPITIVKWSAD-SNFIVTGGEDGTICVWQLS  149 (343)
Q Consensus        84 ~~~s~-~~~~l~~~--~d~~i~v~~~~~~~~~~~~~~~----------~~~v~~~~~~~~-~~~l~s~~~dg~i~iwd~~  149 (343)
                      ++++| ++.++++.  .++.|++|+ .+++.+..+...          ......++++|+ +.++++...++.|++||..
T Consensus       148 ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~  226 (329)
T 3fvz_A          148 VAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTD  226 (329)
T ss_dssp             EEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred             EEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECC
Confidence            99999 78888885  488999999 567777766422          234889999998 7778888889999999998


Q ss_pred             ccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeec------CCCceEEEEeeCCCeEEEEecCCCceEEEe
Q psy10867        150 RLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSK------LGAKSRVASVSHDRTCKIFDLCTGEDLLSL  223 (343)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~------~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~  223 (343)
                      +++....+.                    ...+...+..++++|      ++  ...++...+..+++||..+++.+..+
T Consensus       227 ~G~~~~~~~--------------------~~~~~~~~~~~~~~pg~~~~~~g--~~~v~~~~~~~v~~~~~~~g~~~~~~  284 (329)
T 3fvz_A          227 TKEFVREIK--------------------HASFGRNVFAISYIPGFLFAVNG--KPYFGDQEPVQGFVMNFSSGEIIDVF  284 (329)
T ss_dssp             TCCEEEEEC--------------------CTTTTTCEEEEEEETTEEEEEEC--CCCTTCSCCCCEEEEETTTCCEEEEE
T ss_pred             CCcEEEEEe--------------------ccccCCCcceeeecCCEEEEeCC--CEEeccCCCcEEEEEEcCCCeEEEEE
Confidence            665444331                    123556678888888      33  22333344568999999999998887


Q ss_pred             e----cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecc
Q psy10867        224 I----LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQV  258 (343)
Q Consensus       224 ~----~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~  258 (343)
                      .    +...+..++++|+|..+++...++.|++|++...
T Consensus       285 ~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~~  323 (329)
T 3fvz_A          285 KPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTEK  323 (329)
T ss_dssp             CCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEEC
T ss_pred             cCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCcc
Confidence            4    4456899999999977788888999999998763

>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}

Probab=99.86  E-value=2.3e-19  Score=147.71  Aligned_cols=244  Identities=9%  Similarity=0.030  Sum_probs=162.9

Q ss_pred             cceEEEEeCCceEEEEEc---------CCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-ecC---C--eEE
Q psy10867         38 SPHSMCLLGNDYVLGVEK---------GKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SIE---T--KLH  102 (343)
Q Consensus        38 ~v~~~~~~~~~~~~~~~~---------~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d---~--~i~  102 (343)
                      .+..+++  ||+.++...         .++.|.+|++.+++....     ..+..++|+|||+.|+. +.+   +  .|.
T Consensus        16 ~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l-----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~   88 (347)
T 2gop_A           16 YLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRFI-----ENATMPRISPDGKKIAFMRANEEKKVSEIW   88 (347)
T ss_dssp             EEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEEE-----ESCEEEEECTTSSEEEEEEEETTTTEEEEE
T ss_pred             EcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEEc-----ccCCCeEECCCCCEEEEEEeccCCCcceEE
Confidence            4566677  665554431         136799999988765433     56889999999998886 322   3  488


Q ss_pred             EEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCC---------------------------CeEEEeecCccceee
Q psy10867        103 MWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGED---------------------------GTICVWQLSRLICKQ  155 (343)
Q Consensus       103 v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d---------------------------g~i~iwd~~~~~~~~  155 (343)
                      +|++.+++.......+ . +..++|+|+++.|+.++.+                           ..|.+||+.+++...
T Consensus        89 ~~~~~~g~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~  166 (347)
T 2gop_A           89 VADLETLSSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIE  166 (347)
T ss_dssp             EEETTTTEEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEE
T ss_pred             EEECCCCceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEe
Confidence            8898887765554433 3 9999999999988887632                           568889988764311


Q ss_pred             eeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCC------C-eEEEEecCCCceEEEeecCCc
Q psy10867        156 TVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHD------R-TCKIFDLCTGEDLLSLILDTR  228 (343)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d------~-~i~~wd~~~~~~~~~~~~~~~  228 (343)
                                            .+.. . .+..+.|+|++   +++++..+      . ...+|.+.+++......+ ..
T Consensus       167 ----------------------~l~~-~-~~~~~~~spdg---~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~l~~~-~~  218 (347)
T 2gop_A          167 ----------------------EFEK-P-RFSSGIWHRDK---IVVNVPHREIIPQYFKFWDIYIWEDGKEEKMFEK-VS  218 (347)
T ss_dssp             ----------------------EEEE-E-TTCEEEEETTE---EEEEEECCCSSCCSSCCEEEEEEETTEEEEEEEE-ES
T ss_pred             ----------------------eecC-C-CcccccCCCCe---EEEEEecccccccccccccEEEeCCCceEEeccC-cc
Confidence                                  2222 2 67889999987   55555443      2 334444435544333333 44


Q ss_pred             EEEEEEcCCCCEEEEEcCC--------CcEEEEEeecccccccccccCCCCCCccccccCcEEE-EEEccCCCEEEEEeC
Q psy10867        229 LTCVAFDGTEDNIYMGTSE--------GVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTS-LSCSITGITLLSSSA  299 (343)
Q Consensus       229 i~~~~~~~~~~~l~~~~~d--------~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~s~~~~~l~s~~~  299 (343)
                      +..+  +|+|++|+.++.+        ..|++||  ....           .....++...+.. +.|+ |+ ++++++.
T Consensus       219 ~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~-----------~~l~~~~~~~~~~~~~~s-dg-~~~~~~~  281 (347)
T 2gop_A          219 FYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEV-----------MGILDEVDRGVGQAKIKD-GK-VYFTLFE  281 (347)
T ss_dssp             EEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCE-----------EESSTTCCSEEEEEEEET-TE-EEEEEEE
T ss_pred             eeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCce-----------EeccccCCcccCCccEEc-Cc-EEEEEec
Confidence            4444  9999988877644        3677777  2211           1123345667876 8999 88 8899999


Q ss_pred             CCcEEEEecccceeeeecccCCceEEEEEccCCCeeeec
Q psy10867        300 DETLKIWHTISRQCLRTIQHKGPVLGAFLGLLPPAIHDY  338 (343)
Q Consensus       300 dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~  338 (343)
                      ++.+++| +.+++....+.+.+.|.+++|+|  ..++++
T Consensus       282 ~~~~~l~-~~~g~~~~~~~~~~~v~~~~~s~--~~~~~~  317 (347)
T 2gop_A          282 EGSVNLY-IWDGEIKPIAKGRHWIMGFDVDE--IVVYLK  317 (347)
T ss_dssp             TTEEEEE-EESSSEEEEECSSSEEEEEEESS--SEEEEE
T ss_pred             CCcEEEE-EcCCceEEEecCCCeEEeeeeeC--cEEEEE
Confidence            9999999 88666654445677899999999  555544

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=99.86  E-value=8e-19  Score=138.86  Aligned_cols=244  Identities=14%  Similarity=0.043  Sum_probs=182.3

Q ss_pred             CceEEEEEcCCCeEEEEeCCCcccceecccCC-cceEEEEECCCCCEEEEecCCeEEEEEccCCceEEEecccC-CCeEE
Q psy10867         47 NDYVLGVEKGKPMIQAWPVNSQEKAQLRLICP-GRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHY-QPITI  124 (343)
Q Consensus        47 ~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~~~~-~~v~~  124 (343)
                      .++++++++.++.|.+||.++++.+..+..+. ..+.++.++|+|++++ +.++.|+.||. +|+.+..+..+. ..+.+
T Consensus         4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv-s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~   81 (276)
T 3no2_A            4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF-SYSKGAKMITR-DGRELWNIAAPAGCEMQT   81 (276)
T ss_dssp             CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE-ECBSEEEEECT-TSCEEEEEECCTTCEEEE
T ss_pred             CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE-eCCCCEEEECC-CCCEEEEEcCCCCccccc
Confidence            35777788888999999999999886665554 4788999999999999 56788999998 899998887653 47889


Q ss_pred             EEEecCCCEEEEecC-CCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEe
Q psy10867        125 VKWSADSNFIVTGGE-DGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASV  203 (343)
Q Consensus       125 ~~~~~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~  203 (343)
                      +.+.++|+.+++.+. ++.|..+|. +++....+...                .....+......+++.+++  +++++.
T Consensus        82 ~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~----------------~~~~~~~~~~~~v~~~~~G--~~lv~~  142 (276)
T 3no2_A           82 ARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFE----------------TGIERPHAQFRQINKNKKG--NYLVPL  142 (276)
T ss_dssp             EEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEEC----------------CSCSSGGGSCSCCEECTTS--CEEEEE
T ss_pred             cEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEecc----------------CCCCcccccccCceECCCC--CEEEEe
Confidence            999999999999877 788888886 45554443311                0001122344556778888  799999


Q ss_pred             eCCCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCcccc-ccCcE
Q psy10867        204 SHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIG-HEKQV  282 (343)
Q Consensus       204 ~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~v  282 (343)
                      ..++.|..||.+ |+.+.++.....+..+...++++.++++..++.|..+|..+++...++...      .+.+ .-..+
T Consensus       143 ~~~~~v~~~d~~-G~~~w~~~~~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~------~~~~~~l~~~  215 (276)
T 3no2_A          143 FATSEVREIAPN-GQLLNSVKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNAN------DIEGVQLFFV  215 (276)
T ss_dssp             TTTTEEEEECTT-SCEEEEEECSSCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGG------GSBSCCCSEE
T ss_pred             cCCCEEEEECCC-CCEEEEEECCCCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCC------CCCCcccccc
Confidence            999999999987 999999987777778888999999999988889999998866654433210      0011 12347


Q ss_pred             EEEEEccCCCEEEEEeCC--------CcEEEEec-ccceeeeecc
Q psy10867        283 TSLSCSITGITLLSSSAD--------ETLKIWHT-ISRQCLRTIQ  318 (343)
Q Consensus       283 ~~~~~s~~~~~l~s~~~d--------g~i~iwd~-~~~~~~~~~~  318 (343)
                      ..+...++|+++++....        +..+++++ .+|+.+.++.
T Consensus       216 ~~~~~~~~G~i~v~~~~g~~~~~~~~~~~~~~~~~~~g~~~W~~~  260 (276)
T 3no2_A          216 AQLFPLQNGGLYICNWQGHDREAGKGKHPQLVEIDSEGKVVWQLN  260 (276)
T ss_dssp             EEEEECTTSCEEEEEECTTCTTGGGSCCCSEEEECTTSBEEEEEC
T ss_pred             ccceEcCCCCEEEEeccCccccccccCCceEEEECCCCCEEEEec
Confidence            888899999988877421        23456666 5788888876

>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1

Probab=99.85  E-value=8.2e-18  Score=134.51  Aligned_cols=219  Identities=11%  Similarity=0.125  Sum_probs=160.2

Q ss_pred             EEecCCCCeEEEEecCCceEEEEEec------CCCCcceEEEEe-CCceEEEEEcC-CCeEEEEeCCCcccceecc-cCC
Q psy10867          8 AFSYDGSGAISVWEPKGGTLLMSYKG------ASVLSPHSMCLL-GNDYVLGVEKG-KPMIQAWPVNSQEKAQLRL-ICP   78 (343)
Q Consensus         8 ~~s~~~dg~i~iwd~~~~~~~~~~~~------~~~~~v~~~~~~-~~~~~~~~~~~-~~~i~iw~~~~~~~~~~~~-~~~   78 (343)
                      .++...++.|.+||.. ++.+..+..      +.. .+..+++. +++.++++... ++.|.+|+. +++.+..+. .+.
T Consensus        44 ~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~-~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~-~g~~~~~~~~~~~  120 (286)
T 1q7f_A           44 IVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLL-YPNRVAVVRNSGDIIVTERSPTHQIQIYNQ-YGQFVRKFGATIL  120 (286)
T ss_dssp             EEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBS-SEEEEEEETTTTEEEEEECGGGCEEEEECT-TSCEEEEECTTTC
T ss_pred             EEEECCCCEEEEECCC-CcEEEEecccCCCccccc-CceEEEEEcCCCeEEEEcCCCCCEEEEECC-CCcEEEEecCccC
Confidence            3333446889999976 666666643      224 67899994 78888888742 589999994 455444332 344


Q ss_pred             cceEEEEECCCCCEEEEe-cCCeEEEEEccCCceEEEec--ccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceee
Q psy10867         79 GRISSMQASPDAAYIAVS-IETKLHMWQISSGRLLATAS--SHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQ  155 (343)
Q Consensus        79 ~~v~~~~~s~~~~~l~~~-~d~~i~v~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~  155 (343)
                      ..+..++++|+|+++++. .++.|.+|+. +++.+..+.  .+...+..++++|+++++++...++.|++||.... .  
T Consensus       121 ~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g~-~--  196 (286)
T 1q7f_A          121 QHPRGVTVDNKGRIIVVECKVMRVIIFDQ-NGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQ-Y--  196 (286)
T ss_dssp             SCEEEEEECTTSCEEEEETTTTEEEEECT-TSCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTCC-E--
T ss_pred             CCceEEEEeCCCCEEEEECCCCEEEEEcC-CCCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCCCC-E--
Confidence            578999999999988874 5789999996 466665553  34456899999999998888888899999997542 2  


Q ss_pred             eeecCCCCCCCCccccccceeeeec--ccccceEEEEeecCCCceEEEEeeCCC-eEEEEecCCCceEEEeec---CCcE
Q psy10867        156 TVAFGIPGSSGKGVTGLTEPLHVKS--QHSLPVTHVTLSKLGAKSRVASVSHDR-TCKIFDLCTGEDLLSLIL---DTRL  229 (343)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~l~~~~~d~-~i~~wd~~~~~~~~~~~~---~~~i  229 (343)
                                          +..+.  ++...+..+++++++  +++++...++ .|.+||. +++.+..+..   ...+
T Consensus       197 --------------------~~~~~~~g~~~~p~~i~~d~~G--~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~  253 (286)
T 1q7f_A          197 --------------------LRQIGGEGITNYPIGVGINSNG--EILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQC  253 (286)
T ss_dssp             --------------------EEEESCTTTSCSEEEEEECTTC--CEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCE
T ss_pred             --------------------EEEEccCCccCCCcEEEECCCC--CEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcc
Confidence                                12222  223568899999998  7888877776 9999995 5666666653   2347


Q ss_pred             EEEEEcCCCCEEEEEcCCCcEEEEEeec
Q psy10867        230 TCVAFDGTEDNIYMGTSEGVIKSFCLRQ  257 (343)
Q Consensus       230 ~~~~~~~~~~~l~~~~~d~~i~i~d~~~  257 (343)
                      ..++++|+|+++++ +.++.|++|++..
T Consensus       254 ~~i~~~~~g~l~vs-~~~~~v~v~~~~~  280 (286)
T 1q7f_A          254 FDVALMDDGSVVLA-SKDYRLYIYRYVQ  280 (286)
T ss_dssp             EEEEEETTTEEEEE-ETTTEEEEEECSC
T ss_pred             eeEEECCCCcEEEE-CCCCeEEEEEccc
Confidence            89999999986666 5799999998754

>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A

Probab=99.85  E-value=2.1e-18  Score=136.79  Aligned_cols=241  Identities=6%  Similarity=-0.036  Sum_probs=170.6

Q ss_pred             cceEEEEeCCceEEE-EEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEEecCCeEEEEEccCCceEEEec
Q psy10867         38 SPHSMCLLGNDYVLG-VEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATAS  116 (343)
Q Consensus        38 ~v~~~~~~~~~~~~~-~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~  116 (343)
                      .+.++++++++.+++ +...++.|.+|+..+.........+...+..+++.++++++++..++.|.+||...........
T Consensus        25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~i~~~d~~~~~~~~~~~  104 (270)
T 1rwi_B           25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVLPF  104 (270)
T ss_dssp             CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEETTTEEEEECTTCSCCEECCC
T ss_pred             CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcCCCEEEEEeCCCceEeeeec
Confidence            578899999998877 6466689999998765543322233456788999999997777668899999987654432222


Q ss_pred             ccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCC
Q psy10867        117 SHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGA  196 (343)
Q Consensus       117 ~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  196 (343)
                      .....+..+++.++++++++...++.|.+|+..+....                      .........+..+++++++ 
T Consensus       105 ~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~----------------------~~~~~~~~~p~~i~~~~~g-  161 (270)
T 1rwi_B          105 DGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQT----------------------VLPFTGLNDPDGVAVDNSG-  161 (270)
T ss_dssp             CSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCE----------------------ECCCCSCCSCCCEEECTTC-
T ss_pred             CCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeE----------------------eeccccCCCceeEEEeCCC-
Confidence            33356899999999998887777889999976543211                      1111223457789999988 


Q ss_pred             ceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCcc
Q psy10867        197 KSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDF  275 (343)
Q Consensus       197 ~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~  275 (343)
                       +++++...++.|.+||........... ....+..++++++|..+++...++.|.+||........           ..
T Consensus       162 -~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~-----------~~  229 (270)
T 1rwi_B          162 -NVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTV-----------LP  229 (270)
T ss_dssp             -CEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEE-----------CC
T ss_pred             -CEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCccee-----------ec
Confidence             677777778899999987665443222 22568999999999777777778899999876532111           11


Q ss_pred             ccccCcEEEEEEccCCCEEEEEeCCCcEEEEeccccee
Q psy10867        276 IGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQC  313 (343)
Q Consensus       276 ~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~  313 (343)
                      ..+...+.+++++++|+++++...++.|+++++...+.
T Consensus       230 ~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~~  267 (270)
T 1rwi_B          230 FTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHHH  267 (270)
T ss_dssp             CCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGGS
T ss_pred             cCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCccc
Confidence            12235689999999999888988999999999876543

>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}

Probab=99.84  E-value=5e-18  Score=136.45  Aligned_cols=232  Identities=10%  Similarity=-0.014  Sum_probs=165.1

Q ss_pred             eecccCCcceEEEEECCCCC-EEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecC
Q psy10867         72 QLRLICPGRISSMQASPDAA-YIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLS  149 (343)
Q Consensus        72 ~~~~~~~~~v~~~~~s~~~~-~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~  149 (343)
                      ..+..+.....+++|+|+++ ++++ ..++.|..|+..++  ...+..+...+.+++++|+++++++...++.|.+||..
T Consensus        21 ~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~   98 (296)
T 3e5z_A           21 RRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREP   98 (296)
T ss_dssp             EEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECST
T ss_pred             EEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCC
Confidence            33334556678999999998 5555 56789999999877  56666677789999999999988887778899999997


Q ss_pred             ccceeeeeecCCCCCCCCccccccceeeeec-ccccceEEEEeecCCCceEEEE----ee-------------CCCeEEE
Q psy10867        150 RLICKQTVAFGIPGSSGKGVTGLTEPLHVKS-QHSLPVTHVTLSKLGAKSRVAS----VS-------------HDRTCKI  211 (343)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~l~~----~~-------------~d~~i~~  211 (343)
                      +++.....                   .... .....+..++++|+|  .++++    ++             ..+.|..
T Consensus        99 ~g~~~~~~-------------------~~~~~~~~~~~~~i~~d~~G--~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~  157 (296)
T 3e5z_A           99 GGEWESIA-------------------DSFEGKKLNSPNDVCLAPDG--SLWFSDPTYGIDKPEEGYGGEMELPGRWVFR  157 (296)
T ss_dssp             TCCEEEEE-------------------CEETTEECCCCCCEEECTTS--CEEEEECSHHHHCGGGSSCCCCCSSSCEEEE
T ss_pred             CCcEEEEe-------------------eccCCCCCCCCCCEEECCCC--CEEEECCccccccccccccccccCCCcEEEE
Confidence            76432211                   0011 112356789999998  67776    33             1346666


Q ss_pred             EecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeeccccc-ccccccCCCCCCccccccCcEEEEEEccC
Q psy10867        212 FDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRT-RDHHIQDSTSNPDFIGHEKQVTSLSCSIT  290 (343)
Q Consensus       212 wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~s~~  290 (343)
                      ++.. ++.............++|+|+++.+++.+.++.|++|++...... ...        ..+..+...+..++++++
T Consensus       158 ~~~~-g~~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~--------~~~~~~~~~p~~i~~d~~  228 (296)
T 3e5z_A          158 LAPD-GTLSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQG--------VHFTVEPGKTDGLRVDAG  228 (296)
T ss_dssp             ECTT-SCEEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEE--------EEECCSSSCCCSEEEBTT
T ss_pred             ECCC-CCEEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCC--------eEeeCCCCCCCeEEECCC
Confidence            7655 554433345566889999999999977788899999998732111 000        011123455678999999


Q ss_pred             CCEEEEEeCCCcEEEEecccceeeeecc-cCCceEEEEE-ccCCCeeeecc
Q psy10867        291 GITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVLGAFL-GLLPPAIHDYD  339 (343)
Q Consensus       291 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~-sp~~~~l~~~~  339 (343)
                      |+++++.  ++.|.+||.. ++.+..+. +.. +.+++| +|+++.|++++
T Consensus       229 G~l~v~~--~~~v~~~~~~-g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t  275 (296)
T 3e5z_A          229 GLIWASA--GDGVHVLTPD-GDELGRVLTPQT-TSNLCFGGPEGRTLYMTV  275 (296)
T ss_dssp             SCEEEEE--TTEEEEECTT-SCEEEEEECSSC-CCEEEEESTTSCEEEEEE
T ss_pred             CCEEEEc--CCeEEEECCC-CCEEEEEECCCC-ceeEEEECCCCCEEEEEc
Confidence            9876666  7899999986 78887777 555 999999 68999888765

>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}

Probab=99.84  E-value=4.4e-18  Score=136.75  Aligned_cols=243  Identities=12%  Similarity=0.034  Sum_probs=171.2

Q ss_pred             ceEEEEEecCCCCcceEEEEeCCce-EEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEEec-CCeEE
Q psy10867         25 GTLLMSYKGASVLSPHSMCLLGNDY-VLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSI-ETKLH  102 (343)
Q Consensus        25 ~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-d~~i~  102 (343)
                      +..+..+..+.. ...+++|+|++. +++++..++.|..|+..++  ...+..+...+.+++++|+|+++++.. ++.|.
T Consensus        17 ~~~~~~l~~~~~-~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~   93 (296)
T 3e5z_A           17 GAEARRLADGFT-WTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLE   93 (296)
T ss_dssp             TCCCEEEECCCS-SEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEE
T ss_pred             CCcEEEEecCCc-cccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEE
Confidence            344455555555 778999999997 7888877799999999887  444445667899999999999888754 58999


Q ss_pred             EEEccCCceEEEeccc----CCCeEEEEEecCCCEEEE----ec-------------CCCeEEEeecCccceeeeeecCC
Q psy10867        103 MWQISSGRLLATASSH----YQPITIVKWSADSNFIVT----GG-------------EDGTICVWQLSRLICKQTVAFGI  161 (343)
Q Consensus       103 v~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~s----~~-------------~dg~i~iwd~~~~~~~~~~~~~~  161 (343)
                      +||..+++........    ...+..++++|+|+++++    |+             ..+.|..++.. +          
T Consensus        94 ~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g----------  162 (296)
T 3e5z_A           94 RQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-G----------  162 (296)
T ss_dssp             EECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-S----------
T ss_pred             EEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-C----------
Confidence            9999888765443321    234678999999998887    33             12455555554 2          


Q ss_pred             CCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecC-CCce---EEEee-cCCcEEEEEEcC
Q psy10867        162 PGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLC-TGED---LLSLI-LDTRLTCVAFDG  236 (343)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~-~~~~---~~~~~-~~~~i~~~~~~~  236 (343)
                                   ....+..+......++|+|++  +.+++.+.++.|.+||+. +++.   ...+. ....+..+++++
T Consensus       163 -------------~~~~~~~~~~~~~gi~~s~dg--~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~  227 (296)
T 3e5z_A          163 -------------TLSAPIRDRVKPNGLAFLPSG--NLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDA  227 (296)
T ss_dssp             -------------CEEEEECCCSSEEEEEECTTS--CEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBT
T ss_pred             -------------CEEEeecCCCCCccEEECCCC--CEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECC
Confidence                         122223455667899999999  666778888999999987 4544   22221 234567899999


Q ss_pred             CCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEE-ccCCCEEEEEeCCCcEEEEecccce
Q psy10867        237 TEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSC-SITGITLLSSSADETLKIWHTISRQ  312 (343)
Q Consensus       237 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-s~~~~~l~s~~~dg~i~iwd~~~~~  312 (343)
                      +|+++++.  ++.|.+||... ..           +..+..+.. +++++| +|+++.|++++.+ .+.-++..+.+
T Consensus       228 ~G~l~v~~--~~~v~~~~~~g-~~-----------~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~-~l~~~~~~~~~  288 (296)
T 3e5z_A          228 GGLIWASA--GDGVHVLTPDG-DE-----------LGRVLTPQT-TSNLCFGGPEGRTLYMTVST-EFWSIETNVRG  288 (296)
T ss_dssp             TSCEEEEE--TTEEEEECTTS-CE-----------EEEEECSSC-CCEEEEESTTSCEEEEEETT-EEEEEECSCCB
T ss_pred             CCCEEEEc--CCeEEEECCCC-CE-----------EEEEECCCC-ceeEEEECCCCCEEEEEcCC-eEEEEEccccc
Confidence            99866655  88899998752 21           223444555 889999 5899988888876 34455555544

>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*

Probab=99.84  E-value=3.6e-16  Score=125.64  Aligned_cols=265  Identities=7%  Similarity=-0.034  Sum_probs=188.8

Q ss_pred             cCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceec-ccCCcceEEEEECCCCCEEEEec-CCeEEEEEccCCc
Q psy10867         33 GASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLR-LICPGRISSMQASPDAAYIAVSI-ETKLHMWQISSGR  110 (343)
Q Consensus        33 ~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~-d~~i~v~~~~~~~  110 (343)
                      .+.. .+.++++.++|.+.++...++.|.+||.. ++..... ......+..+++.+++.++++.. ++.|..|+.. ++
T Consensus        12 ~~~~-~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~   88 (299)
T 2z2n_A           12 NQDT-GPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-GI   88 (299)
T ss_dssp             SSSC-CEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SC
T ss_pred             CcCC-CccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-Cc
Confidence            3445 88999999999988887766899999988 5543322 23456789999999999888754 7889999976 44


Q ss_pred             eE-EEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEE
Q psy10867        111 LL-ATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHV  189 (343)
Q Consensus       111 ~~-~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  189 (343)
                      .. ..+......+.++++.++++++++...++.|..||. ++....                     .........+..+
T Consensus        89 ~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~---------------------~~~~~~~~~~~~i  146 (299)
T 2z2n_A           89 IKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIRE---------------------YELPNKGSYPSFI  146 (299)
T ss_dssp             EEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEE---------------------EECSSTTCCEEEE
T ss_pred             EEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEE---------------------ecCCCCCCCCceE
Confidence            32 222234557899999999988888777889999998 432211                     1112234568899


Q ss_pred             EeecCCCceEEEEeeCCCeEEEEecCCCceEEE-ee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeeccccccccccc
Q psy10867        190 TLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLS-LI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQ  267 (343)
Q Consensus       190 ~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~-~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~  267 (343)
                      ++.+++  .++++...++.|..||. +++.... .. ....+..++++++++..++...++.|.+||. ..... ..   
T Consensus       147 ~~~~~g--~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~-~~---  218 (299)
T 2z2n_A          147 TLGSDN--ALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEIT-EF---  218 (299)
T ss_dssp             EECTTS--CEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEE-EE---
T ss_pred             EEcCCC--CEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEE-EE---
Confidence            999988  67777777889999998 6665432 12 2446889999999997777767889999987 33211 11   


Q ss_pred             CCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeee-cc-cCCceEEEEEccCCCeeeec
Q psy10867        268 DSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRT-IQ-HKGPVLGAFLGLLPPAIHDY  338 (343)
Q Consensus       268 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~-~~-~~~~v~~~~~sp~~~~l~~~  338 (343)
                            ....+...+.+++++++|+++++...++.|..||. +++.... +. ....+.++++ ++++..++.
T Consensus       219 ------~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~-~~g~l~v~~  283 (299)
T 2z2n_A          219 ------KIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTS-NNIIEEYPIQIKSAEPHGICF-DGETIWFAM  283 (299)
T ss_dssp             ------ECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEET-TTEEEEEECSSSSCCEEEEEE-CSSCEEEEE
T ss_pred             ------ECCCCCCCceeEEECCCCCEEEeccCCceEEEECC-CCceEEEeCCCCCCccceEEe-cCCCEEEEe
Confidence                  12234467899999999997777667889999998 4543222 22 4567899999 888877664

>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*

Probab=99.83  E-value=2.5e-16  Score=129.94  Aligned_cols=272  Identities=11%  Similarity=-0.006  Sum_probs=183.2

Q ss_pred             eEEEecCC--CC---eEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEc----------CCCeEEEEeCCCccc
Q psy10867          6 EVAFSYDG--SG---AISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEK----------GKPMIQAWPVNSQEK   70 (343)
Q Consensus         6 ~~~~s~~~--dg---~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~----------~~~~i~iw~~~~~~~   70 (343)
                      ..+|..+.  .+   .|.++|..+++.+.++..... +  .++++||++.+..+.          .++.|.+||..+.+.
T Consensus        33 ~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~-p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~  109 (373)
T 2mad_H           33 RRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFL-P--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLP  109 (373)
T ss_pred             CEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCC-C--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcE
Confidence            44566664  33   889999999999988886553 3  999999998877764          347899999988776


Q ss_pred             ceecccC-------CcceEEEEECCCCCEEEEe-c--CCeEEEEEccCCceEEE-ecccCCCeEEEEEecCC-CEEEEec
Q psy10867         71 AQLRLIC-------PGRISSMQASPDAAYIAVS-I--ETKLHMWQISSGRLLAT-ASSHYQPITIVKWSADS-NFIVTGG  138 (343)
Q Consensus        71 ~~~~~~~-------~~~v~~~~~s~~~~~l~~~-~--d~~i~v~~~~~~~~~~~-~~~~~~~v~~~~~~~~~-~~l~s~~  138 (343)
                      +......       ......++|+|||++|+++ .  ++.|.++| .+++.+.. +... +   ++.+.|++ +.+++.+
T Consensus       110 ~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~-~---~~~~~~~~~~~~~~~~  184 (373)
T 2mad_H          110 IADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSP-T---CYHIHPGAPSTFYLLC  184 (373)
T ss_pred             EEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCC-c---eEEEEeCCCceEEEEc
Confidence            6433211       1234589999999998863 2  47899999 99988877 6432 2   24555655 4566777


Q ss_pred             CCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccc-eEEEEeecCCCceEEEEeeCCCeEEEEecCCC
Q psy10867        139 EDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLP-VTHVTLSKLGAKSRVASVSHDRTCKIFDLCTG  217 (343)
Q Consensus       139 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~  217 (343)
                      .||.+.++|. +++......                ..... ....+ .....+.+++. .+++ .+..+.+.+.|+...
T Consensus       185 ~dg~~~~vd~-~g~~~~~~~----------------~~~~~-~~~~p~~~~~~~~~~~~-~~~~-~~~~~~v~vid~~~~  244 (373)
T 2mad_H          185 AQGGLAKTDH-AGGAAGAGL----------------VGAML-TAAQNLLTQPAQANKSG-RIVW-PVYSGKILQADISAA  244 (373)
T ss_pred             CCCCEEEEEC-CCcEEEEEe----------------ccccc-cCCcceeecceeEecCC-EEEE-EcCCceEEEEeccCC
Confidence            8999999999 664432110                00000 11112 12345666653 3333 346789999998755


Q ss_pred             c--eEEEeec-----------CCcEEEEEEcCCCCEEEEEcC----------CCcEEEEEeecccccccccccCCCCCCc
Q psy10867        218 E--DLLSLIL-----------DTRLTCVAFDGTEDNIYMGTS----------EGVIKSFCLRQVPRTRDHHIQDSTSNPD  274 (343)
Q Consensus       218 ~--~~~~~~~-----------~~~i~~~~~~~~~~~l~~~~~----------d~~i~i~d~~~~~~~~~~~~~~~~~~~~  274 (343)
                      .  .+..+..           +.....+.++|+++.++++..          ++.|.++|+.+.+....           
T Consensus       245 ~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~-----------  313 (373)
T 2mad_H          245 GATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQ-----------  313 (373)
T ss_pred             cceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEE-----------
Confidence            3  2222221           233445889999998888653          35799999987655332           


Q ss_pred             cccccCcEEEEEEccCCC-EEEEEe-CCCcEEEEecccceeeeec
Q psy10867        275 FIGHEKQVTSLSCSITGI-TLLSSS-ADETLKIWHTISRQCLRTI  317 (343)
Q Consensus       275 ~~~~~~~v~~~~~s~~~~-~l~s~~-~dg~i~iwd~~~~~~~~~~  317 (343)
                      +. -.....+++|+|||+ +++++. .++.|.++|+.+++.+.++
T Consensus       314 i~-~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i  357 (373)
T 2mad_H          314 IS-LGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQST  357 (373)
T ss_pred             EE-CCCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEeee
Confidence            22 123578999999999 777776 5899999999999999884

>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*

Probab=99.83  E-value=5.9e-18  Score=152.23  Aligned_cols=229  Identities=12%  Similarity=0.069  Sum_probs=160.2

Q ss_pred             CCcceEEEEECCCCCEEEEe--cCC----eEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCe--------
Q psy10867         77 CPGRISSMQASPDAAYIAVS--IET----KLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGT--------  142 (343)
Q Consensus        77 ~~~~v~~~~~s~~~~~l~~~--~d~----~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~--------  142 (343)
                      +...+..++|||||++||.+  .+|    .|++||+.+++.+.....+. .+..++|+||++.|+.++.++.        
T Consensus       123 ~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~-~~~~~~wspDg~~l~~~~~~~~~~~~~~~~  201 (710)
T 2xdw_A          123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERV-KFSCMAWTHDGKGMFYNAYPQQDGKSDGTE  201 (710)
T ss_dssp             SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEE-CSCCEEECTTSSEEEEEECCCCSSCCSSSC
T ss_pred             CCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCc-ccceEEEEeCCCEEEEEEECCccccccccc
Confidence            34468899999999999852  223    89999999998765432222 2678999999999999887765        


Q ss_pred             --------EEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeC-----CCeE
Q psy10867        143 --------ICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSH-----DRTC  209 (343)
Q Consensus       143 --------i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~-----d~~i  209 (343)
                              |++|++.++.....                  .+.....+...+..+.|+|++  ++|+..+.     +..|
T Consensus       202 ~~~~~~~~v~~~~l~t~~~~~~------------------~v~~~~~~~~~~~~~~~SpDg--~~l~~~~~~~~~~~~~l  261 (710)
T 2xdw_A          202 TSTNLHQKLYYHVLGTDQSEDI------------------LCAEFPDEPKWMGGAELSDDG--RYVLLSIREGCDPVNRL  261 (710)
T ss_dssp             CCCCCCCEEEEEETTSCGGGCE------------------EEECCTTCTTCEEEEEECTTS--CEEEEEEECSSSSCCEE
T ss_pred             cccCCCCEEEEEECCCCcccce------------------EEeccCCCCeEEEEEEEcCCC--CEEEEEEEccCCCccEE
Confidence                    99999987542111                  122222345567899999999  67766554     6789


Q ss_pred             EEEecCC------Cc-eEEEee-cCCcEEEEEEcCCCCEEEEEcCC----CcEEEEEeecccccccccccCCCCCCcccc
Q psy10867        210 KIFDLCT------GE-DLLSLI-LDTRLTCVAFDGTEDNIYMGTSE----GVIKSFCLRQVPRTRDHHIQDSTSNPDFIG  277 (343)
Q Consensus       210 ~~wd~~~------~~-~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d----~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~  277 (343)
                      ++||+.+      ++ ....+. +...+.. .|+|+|+.|+..+..    +.|.+||+.......         ...+..
T Consensus       262 ~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~---------~~~l~~  331 (710)
T 2xdw_A          262 WYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESK---------WKVLVP  331 (710)
T ss_dssp             EEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGG---------CEEEEC
T ss_pred             EEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCccc---------ceeccC
Confidence            9999986      53 234443 3333433 588999988776543    368999987643110         122333


Q ss_pred             ccC--cEEEEEEccCCCEEEEEeCCCc--EEEEecccceeeeecc-cCCceEEEEEccCCCeee
Q psy10867        278 HEK--QVTSLSCSITGITLLSSSADET--LKIWHTISRQCLRTIQ-HKGPVLGAFLGLLPPAIH  336 (343)
Q Consensus       278 ~~~--~v~~~~~s~~~~~l~s~~~dg~--i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~  336 (343)
                      |..  .+..++|++++.++++...|+.  |++|++.+|+.+..+. +.+.+..+.++|+++.|+
T Consensus       332 ~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~  395 (710)
T 2xdw_A          332 EHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIF  395 (710)
T ss_dssp             CCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEE
T ss_pred             CCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEE
Confidence            433  6888999988888889888884  5667776787777777 677889999999998766

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=99.83  E-value=4.5e-17  Score=128.83  Aligned_cols=211  Identities=7%  Similarity=-0.049  Sum_probs=166.0

Q ss_pred             ceEEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccC-CcceEE
Q psy10867          5 NEVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLIC-PGRISS   83 (343)
Q Consensus         5 ~~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~-~~~v~~   83 (343)
                      ..++++.++++.|.+||.++|+.+.++..+....+.+++++|+|+++++ . ++.|..||. +++.+..+..+ ...+.+
T Consensus         5 ~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilvs-~-~~~V~~~d~-~G~~~W~~~~~~~~~~~~   81 (276)
T 3no2_A            5 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFS-Y-SKGAKMITR-DGRELWNIAAPAGCEMQT   81 (276)
T ss_dssp             CEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEEE-C-BSEEEEECT-TSCEEEEEECCTTCEEEE
T ss_pred             CcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEEe-C-CCCEEEECC-CCCEEEEEcCCCCccccc
Confidence            4788999999999999999999999999876227899999999999984 3 478999999 67777555443 357889


Q ss_pred             EEECCCCCEEEEe-c-CCeEEEEEccCCceEEEecc------cCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceee
Q psy10867         84 MQASPDAAYIAVS-I-ETKLHMWQISSGRLLATASS------HYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQ  155 (343)
Q Consensus        84 ~~~s~~~~~l~~~-~-d~~i~v~~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~  155 (343)
                      +.+.++|+++++. . ++.|..++. +|+.+..+..      +......+.+.++++++++...++.|..||.. ++...
T Consensus        82 ~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w  159 (276)
T 3no2_A           82 ARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLN  159 (276)
T ss_dssp             EEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEE
T ss_pred             cEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEE
Confidence            9999999999984 4 567888885 6777766541      22234566788999999999999999999998 76655


Q ss_pred             eeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecC-------Cc
Q psy10867        156 TVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILD-------TR  228 (343)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~-------~~  228 (343)
                      ++.                      . ...+.++...+++  +++++++.++.|..+|..+++.+.++...       ..
T Consensus       160 ~~~----------------------~-~~~~~~~~~~~~g--~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~  214 (276)
T 3no2_A          160 SVK----------------------L-SGTPFSSAFLDNG--DCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFF  214 (276)
T ss_dssp             EEE----------------------C-SSCCCEEEECTTS--CEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSE
T ss_pred             EEE----------------------C-CCCccceeEcCCC--CEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccc
Confidence            442                      1 1345567778888  78888888889999999999999998631       12


Q ss_pred             EEEEEEcCCCCEEEEEc
Q psy10867        229 LTCVAFDGTEDNIYMGT  245 (343)
Q Consensus       229 i~~~~~~~~~~~l~~~~  245 (343)
                      +..++..++|+.+++..
T Consensus       215 ~~~~~~~~~G~i~v~~~  231 (276)
T 3no2_A          215 VAQLFPLQNGGLYICNW  231 (276)
T ss_dssp             EEEEEECTTSCEEEEEE
T ss_pred             cccceEcCCCCEEEEec
Confidence            78889999999888873

>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*

Probab=99.83  E-value=6.5e-18  Score=151.95  Aligned_cols=239  Identities=10%  Similarity=-0.024  Sum_probs=161.8

Q ss_pred             cceEEEEeCCceEEEEEcCCC-----eEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-ecCCe-----------
Q psy10867         38 SPHSMCLLGNDYVLGVEKGKP-----MIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SIETK-----------  100 (343)
Q Consensus        38 ~v~~~~~~~~~~~~~~~~~~~-----~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~-----------  100 (343)
                      .+..++|||||++++.+.+++     .|++||+.+++.......+ ..+..++|+|||+.|+. +.++.           
T Consensus       126 ~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~  204 (710)
T 2xdw_A          126 ALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETST  204 (710)
T ss_dssp             EEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCC
T ss_pred             EEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEEEEeCCCEEEEEEECCcccccccccccc
Confidence            578999999998877654432     8999999998876533222 23678999999998885 44433           


Q ss_pred             -----EEEEEccCCc----eEEEecccCCCeEEEEEecCCCEEEEecC-----CCeEEEeecCc------cceeeeeecC
Q psy10867        101 -----LHMWQISSGR----LLATASSHYQPITIVKWSADSNFIVTGGE-----DGTICVWQLSR------LICKQTVAFG  160 (343)
Q Consensus       101 -----i~v~~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-----dg~i~iwd~~~------~~~~~~~~~~  160 (343)
                           |++|++.++.    .+.....|...+..+.|+|||++|+.++.     +..|.+||+.+      +..       
T Consensus       205 ~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~-------  277 (710)
T 2xdw_A          205 NLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGIL-------  277 (710)
T ss_dssp             CCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSC-------
T ss_pred             CCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCcc-------
Confidence                 9999998875    22222335566889999999999887764     56899999876      311       


Q ss_pred             CCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeC----CCeEEEEecCCCce--EEEe-ecCC--cEEE
Q psy10867        161 IPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSH----DRTCKIFDLCTGED--LLSL-ILDT--RLTC  231 (343)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~----d~~i~~wd~~~~~~--~~~~-~~~~--~i~~  231 (343)
                                    ....+..+...+.. .|+|++  ..|+..+.    .+.|.+||+.+++.  ...+ .+..  .+..
T Consensus       278 --------------~~~~l~~~~~~~~~-~~s~dg--~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~  340 (710)
T 2xdw_A          278 --------------KWVKLIDNFEGEYD-YVTNEG--TVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEW  340 (710)
T ss_dssp             --------------CCEEEECSSSSCEE-EEEEET--TEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEE
T ss_pred             --------------ceEEeeCCCCcEEE-EEeccC--CEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEE
Confidence                          12223344444444 478888  44544433    34699999987742  2333 3333  6888


Q ss_pred             EEEcCCCCEEEEEcCCCcE--EEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEE-e---CCCcEEE
Q psy10867        232 VAFDGTEDNIYMGTSEGVI--KSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSS-S---ADETLKI  305 (343)
Q Consensus       232 ~~~~~~~~~l~~~~~d~~i--~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~-~---~dg~i~i  305 (343)
                      ++|++++.++++...++..  ++||+.....           +..+..+...+..+.++|+++.++.. +   ..+.|+.
T Consensus       341 ~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~-----------~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~  409 (710)
T 2xdw_A          341 VACVRSNFLVLCYLHDVKNTLQLHDLATGAL-----------LKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYH  409 (710)
T ss_dssp             EEEETTTEEEEEEEETTEEEEEEEETTTCCE-----------EEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEE
T ss_pred             EEEEcCCEEEEEEEECCEEEEEEEECCCCCE-----------EEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEE
Confidence            9999877888888888855  4555433321           22344456778899999998766532 2   3478999


Q ss_pred             Eecccce
Q psy10867        306 WHTISRQ  312 (343)
Q Consensus       306 wd~~~~~  312 (343)
                      ||+.+++
T Consensus       410 ~d~~tg~  416 (710)
T 2xdw_A          410 CDLTKEE  416 (710)
T ss_dssp             EETTSSS
T ss_pred             EECCCCc
Confidence            9998876

>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...

Probab=99.82  E-value=8.2e-18  Score=136.91  Aligned_cols=279  Identities=13%  Similarity=0.076  Sum_probs=192.3

Q ss_pred             CCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEc----------CCCeEEEEeCCCcccceecccC------
Q psy10867         14 SGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEK----------GKPMIQAWPVNSQEKAQLRLIC------   77 (343)
Q Consensus        14 dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~----------~~~~i~iw~~~~~~~~~~~~~~------   77 (343)
                      ++.|.+.|..+++.+.++..... + . ++++|||+.+..+.          .++.|.+||..+.+.+......      
T Consensus        58 ~~~V~ViD~~t~~v~~~I~vG~~-P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~  134 (386)
T 3sjl_D           58 VTQQFVIDGEAGRVIGMIDGGFL-P-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFL  134 (386)
T ss_dssp             SEEEEEEETTTTEEEEEEEECSS-C-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCC
T ss_pred             CCEEEEEECCCCeEEEEEECCCC-C-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccc
Confidence            57999999999999999987665 4 4 99999997665543          3468999999998877554321      


Q ss_pred             -CcceEEEEECCCCCEEEEe-c--CCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCc-cc
Q psy10867         78 -PGRISSMQASPDAAYIAVS-I--ETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSR-LI  152 (343)
Q Consensus        78 -~~~v~~~~~s~~~~~l~~~-~--d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~-~~  152 (343)
                       ......++|+|||+++.++ .  ++.|.++|+.+++.+.++....  . ...+....+.+++.+.||++.+.++.+ ++
T Consensus       135 ~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g--~-~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~  211 (386)
T 3sjl_D          135 VGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD--C-YHIFPTAPDTFFMHCRDGSLAKVAFGTEGT  211 (386)
T ss_dssp             BSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS--E-EEEEEEETTEEEEEETTSCEEEEECCSSSC
T ss_pred             cCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCC--c-ceeecCCCceeEEECCCCCEEEEECCCCCe
Confidence             1245678999999988863 2  5899999999999988885321  1 223333456777888899999999876 33


Q ss_pred             eeeeeecCCCCCCCCccccccceeeeecccccceE-EEEee-cCCCceEEEEeeCCCeEEEEecCCCce--EEEee----
Q psy10867        153 CKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVT-HVTLS-KLGAKSRVASVSHDRTCKIFDLCTGED--LLSLI----  224 (343)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~-~~~~~~~l~~~~~d~~i~~wd~~~~~~--~~~~~----  224 (343)
                      ......                  ..+.....++. ...|. +++  ++++ .+.+|.+.+.|+.+...  ...+.    
T Consensus       212 v~~~~~------------------~~~~~~~~~~~~~~~~~~~dG--~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~  270 (386)
T 3sjl_D          212 PEITHT------------------EVFHPEDEFLINHPAYSQKAG--RLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTE  270 (386)
T ss_dssp             CEEEEC------------------CCCSCTTSCBCSCCEEETTTT--EEEE-EBTTSEEEEEECTTSSCEECCCEESSCH
T ss_pred             EEEeec------------------ceeccccccccccceeEcCCC--cEEE-EeCCCEEEEEECCCCcceeecceecccc
Confidence            221100                  00001111111 23554 555  4444 55589999999876542  22221    


Q ss_pred             -------cCCcEEEEEEcCCCCEEEEEcC----------CCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEE
Q psy10867        225 -------LDTRLTCVAFDGTEDNIYMGTS----------EGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSC  287 (343)
Q Consensus       225 -------~~~~i~~~~~~~~~~~l~~~~~----------d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  287 (343)
                             .......++++|+++.+++...          .+.|.++|+.+.+....+           . -...+.+|++
T Consensus       271 ~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i-----------~-vg~~~~~lav  338 (386)
T 3sjl_D          271 AERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKF-----------E-MGHEIDSINV  338 (386)
T ss_dssp             HHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEE-----------E-EEEEECEEEE
T ss_pred             ccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEE-----------E-CCCCcceEEE
Confidence                   1223345778999999988753          257999999887654432           1 1236789999


Q ss_pred             ccCCC-EEEEE-eCCCcEEEEecccceeeeecccCCceEEEEEccC
Q psy10867        288 SITGI-TLLSS-SADETLKIWHTISRQCLRTIQHKGPVLGAFLGLL  331 (343)
Q Consensus       288 s~~~~-~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~  331 (343)
                      ++|++ +|++. ..++.|.++|..+++.+.++...+....+.+++|
T Consensus       339 s~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~~~p~~l~~s~d  384 (386)
T 3sjl_D          339 SQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHGPQVITTAD  384 (386)
T ss_dssp             CSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCCCSSCCEEEECC
T ss_pred             CCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCCCCCceeEECCc
Confidence            99997 66654 4589999999999999999997777788888877

>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}

Probab=99.82  E-value=5.8e-18  Score=151.86  Aligned_cols=241  Identities=7%  Similarity=-0.070  Sum_probs=160.9

Q ss_pred             CCCCcceEEEEeCCceEEE-----EEcCCCeEEEEeCCCcccc-eecccCCcceEEEEECCCCCEEEE-ecCCe------
Q psy10867         34 ASVLSPHSMCLLGNDYVLG-----VEKGKPMIQAWPVNSQEKA-QLRLICPGRISSMQASPDAAYIAV-SIETK------  100 (343)
Q Consensus        34 ~~~~~v~~~~~~~~~~~~~-----~~~~~~~i~iw~~~~~~~~-~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~------  100 (343)
                      |.. .+..++|||||++++     .|+++..|++||+.+++.+ ..... ......++|+|||+.|+. +.+..      
T Consensus       119 ~~~-~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~-~~~~~~~~wspDg~~l~~~~~d~~~~~~~~  196 (695)
T 2bkl_A          119 GTV-SLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIE-GGKYATPKWTPDSKGFYYEWLPTDPSIKVD  196 (695)
T ss_dssp             SCE-EEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBS-CCTTCCCEECTTSSEEEEEECCCCTTSCGG
T ss_pred             CCE-EEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccC-cccccceEEecCCCEEEEEEecCCCCCccc
Confidence            443 688999999998888     3444468999999998865 21111 111268999999998886 45444      


Q ss_pred             -------EEEEEccCCc----eEEEecccCCCeEEEEEecCCCEEEEecCCC----eEEEeecCccceeeeeecCCCCCC
Q psy10867        101 -------LHMWQISSGR----LLATASSHYQPITIVKWSADSNFIVTGGEDG----TICVWQLSRLICKQTVAFGIPGSS  165 (343)
Q Consensus       101 -------i~v~~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg----~i~iwd~~~~~~~~~~~~~~~~~~  165 (343)
                             |++|++.++.    ++.....+...+..+.|+|||++|+.++.++    .|.+|+..++.             
T Consensus       197 ~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~-------------  263 (695)
T 2bkl_A          197 ERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKD-------------  263 (695)
T ss_dssp             GGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSS-------------
T ss_pred             cCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCc-------------
Confidence                   9999998875    3333444556789999999999988877665    67777654431             


Q ss_pred             CCccccccceeeeecccccceEEEEeecCCCceEEEEee---CCCeEEEEecCCCce---EEEeec--CCcEEEEEEcCC
Q psy10867        166 GKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVS---HDRTCKIFDLCTGED---LLSLIL--DTRLTCVAFDGT  237 (343)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~---~d~~i~~wd~~~~~~---~~~~~~--~~~i~~~~~~~~  237 (343)
                                ...+..+...+....+ +++  .+++...   .++.|.+||+.+++.   ...+.+  ...+..++++ +
T Consensus       264 ----------~~~l~~~~~~~~~~~~-~~g--~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~  329 (695)
T 2bkl_A          264 ----------FRLLVKGVGAKYEVHA-WKD--RFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-G  329 (695)
T ss_dssp             ----------CEEEEECSSCCEEEEE-ETT--EEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-T
T ss_pred             ----------eEEeecCCCceEEEEe-cCC--cEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-C
Confidence                      2222334445555555 677  5333333   258899999987753   333333  3457888888 6


Q ss_pred             CCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccc-cCcEEEEEEccCCCEEEE----EeCCCcEEEEecccce
Q psy10867        238 EDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGH-EKQVTSLSCSITGITLLS----SSADETLKIWHTISRQ  312 (343)
Q Consensus       238 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~s----~~~dg~i~iwd~~~~~  312 (343)
                      +.++++...|+..++|.+......          ...+..+ ...+..++++|+++.++.    ....+.|++||+.+++
T Consensus       330 ~~lv~~~~~dg~~~l~~~~~~g~~----------~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~  399 (695)
T 2bkl_A          330 GHLSLEYLKDATSEVRVATLKGKP----------VRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGK  399 (695)
T ss_dssp             TEEEEEEEETTEEEEEEEETTCCE----------EEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCC
T ss_pred             CEEEEEEEECCEEEEEEEeCCCCe----------eEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence            777888888999888877631110          1122223 556778889999887662    2335789999998775


Q ss_pred             e
Q psy10867        313 C  313 (343)
Q Consensus       313 ~  313 (343)
                      .
T Consensus       400 ~  400 (695)
T 2bkl_A          400 S  400 (695)
T ss_dssp             E
T ss_pred             E
Confidence            3

>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}

Probab=99.82  E-value=3.5e-17  Score=133.22  Aligned_cols=249  Identities=9%  Similarity=-0.035  Sum_probs=173.8

Q ss_pred             CCeEEEEeCCCcccceecc------cCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEec
Q psy10867         57 KPMIQAWPVNSQEKAQLRL------ICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSA  129 (343)
Q Consensus        57 ~~~i~iw~~~~~~~~~~~~------~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~  129 (343)
                      ++.|.++|.++++......      ........+.+. +++++++ ..++.|.+||..+++.+.++.. ......+++++
T Consensus        16 ~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~~-~~~p~~i~~~~   93 (328)
T 3dsm_A           16 NATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRITG-FTSPRYIHFLS   93 (328)
T ss_dssp             CBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEEC-CSSEEEEEEEE
T ss_pred             CceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcCC-CCCCcEEEEeC
Confidence            5899999999888664331      122346778775 3444444 5678999999999999888853 45688999999


Q ss_pred             CCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEee-CCCe
Q psy10867        130 DSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVS-HDRT  208 (343)
Q Consensus       130 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~-~d~~  208 (343)
                      +++.+++...++.|.+||..+.+....+..+.                 ..+.......+++ .++  .++++.. .++.
T Consensus        94 ~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~-----------------~~~~~~~p~~i~~-~~~--~lyv~~~~~~~~  153 (328)
T 3dsm_A           94 DEKAYVTQIWDYRIFIINPKTYEITGYIECPD-----------------MDMESGSTEQMVQ-YGK--YVYVNCWSYQNR  153 (328)
T ss_dssp             TTEEEEEEBSCSEEEEEETTTTEEEEEEECTT-----------------CCTTTCBCCCEEE-ETT--EEEEEECTTCCE
T ss_pred             CCeEEEEECCCCeEEEEECCCCeEEEEEEcCC-----------------ccccCCCcceEEE-ECC--EEEEEcCCCCCE
Confidence            88655555478999999999876554443110                 0011123455666 344  4555544 4899


Q ss_pred             EEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcCC----------CcEEEEEeecccccccccccCCCCCCccccc
Q psy10867        209 CKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSE----------GVIKSFCLRQVPRTRDHHIQDSTSNPDFIGH  278 (343)
Q Consensus       209 i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d----------~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~  278 (343)
                      |.++|..+++....+........++++|+|++++++..+          +.|.++|..+........         +. .
T Consensus       154 v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~---------~~-~  223 (328)
T 3dsm_A          154 ILKIDTETDKVVDELTIGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFK---------FK-L  223 (328)
T ss_dssp             EEEEETTTTEEEEEEECSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEE---------CC-T
T ss_pred             EEEEECCCCeEEEEEEcCCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEe---------cC-C
Confidence            999999999988888876677889999999877766554          789999987654322111         11 1


Q ss_pred             cCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeee--cc-cCCceEEEEEccCCCeeeecc
Q psy10867        279 EKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRT--IQ-HKGPVLGAFLGLLPPAIHDYD  339 (343)
Q Consensus       279 ~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~--~~-~~~~v~~~~~sp~~~~l~~~~  339 (343)
                      ...+..++++|++++|+.+..  .|.+||..+++....  +. .......++++|++..|++++
T Consensus       224 g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~  285 (328)
T 3dsm_A          224 GDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVAD  285 (328)
T ss_dssp             TCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEE
T ss_pred             CCCceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEc
Confidence            236789999999998887755  899999988876432  12 246789999999666666654

>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*

Probab=99.82  E-value=1.8e-16  Score=137.20  Aligned_cols=273  Identities=11%  Similarity=0.002  Sum_probs=190.8

Q ss_pred             eCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-ecCCeEEEEEcc--CCceEEEecccCCC
Q psy10867         45 LGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQIS--SGRLLATASSHYQP  121 (343)
Q Consensus        45 ~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~--~~~~~~~~~~~~~~  121 (343)
                      +|++.++++..+++.|.++|..+++.+..+.. ...+..+.|+|||+++.+ +.++.|.+||+.  +++.+..+.... .
T Consensus       164 d~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~-g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~-~  241 (567)
T 1qks_A          164 DLENLFSVTLRDAGQIALIDGSTYEIKTVLDT-GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS-E  241 (567)
T ss_dssp             CGGGEEEEEETTTTEEEEEETTTCCEEEEEEC-SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCS-E
T ss_pred             CCCceEEEEeCCCCeEEEEECCCCeEEEEEeC-CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCC-C
Confidence            35567888888889999999999987765533 345779999999998876 678899999996  788887776533 3


Q ss_pred             eEEEEEe----cCCCEEEEecC-CCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeeccccc-ceEEEEeecCC
Q psy10867        122 ITIVKWS----ADSNFIVTGGE-DGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSL-PVTHVTLSKLG  195 (343)
Q Consensus       122 v~~~~~~----~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~  195 (343)
                      ...++|+    |||++++++.. +++|.++|..+.+....+......            ......|.. .+..+..++++
T Consensus       242 P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~------------~~~~~~~p~~rva~i~~s~~~  309 (567)
T 1qks_A          242 ARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMT------------YDEQEYHPEPRVAAILASHYR  309 (567)
T ss_dssp             EEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEEC------------TTTCCEESCCCEEEEEECSSS
T ss_pred             CceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccc------------cccccccCCCceEEEEEcCCC
Confidence            6789999    69998887765 589999999988776655311000            000001222 57788888886


Q ss_pred             CceEEEEeeCCCeEEEEecCCCceE--EEeecCCcEEEEEEcCCCCEEEEEc-CCCcEEEEEeecccccccccccCCCCC
Q psy10867        196 AKSRVASVSHDRTCKIFDLCTGEDL--LSLILDTRLTCVAFDGTEDNIYMGT-SEGVIKSFCLRQVPRTRDHHIQDSTSN  272 (343)
Q Consensus       196 ~~~~l~~~~~d~~i~~wd~~~~~~~--~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~~  272 (343)
                      + .+++....+|.|.++|..+.+.+  ..+........+.|+|++++++++. .++.|.++|+.+.+......      +
T Consensus       310 ~-~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~------v  382 (567)
T 1qks_A          310 P-EFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIED------T  382 (567)
T ss_dssp             S-EEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEE------C
T ss_pred             C-EEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEe------c
Confidence            5 66777778899999998876533  3334556688899999999987765 57899999998765433221      1


Q ss_pred             CccccccCcEEEEEEccCCCEE-EEEe-CCCcEEEEeccc-------ceeeeecc-cCCceEEEEEccCCCeeeecc
Q psy10867        273 PDFIGHEKQVTSLSCSITGITL-LSSS-ADETLKIWHTIS-------RQCLRTIQ-HKGPVLGAFLGLLPPAIHDYD  339 (343)
Q Consensus       273 ~~~~~~~~~v~~~~~s~~~~~l-~s~~-~dg~i~iwd~~~-------~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~  339 (343)
                      ..-..|.+.-..+ ++|++..+ +++. .++.|.++|..+       .+.++++. ....-..+..+|++++|.+..
T Consensus       383 gg~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~  458 (567)
T 1qks_A          383 GGQTPHPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDA  458 (567)
T ss_dssp             SSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEEC
T ss_pred             cCcCCCCccceee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEec
Confidence            0012243222222 58875544 4443 468999999987       66777777 333335578999999998865

>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*

Probab=99.81  E-value=2.2e-15  Score=121.06  Aligned_cols=256  Identities=7%  Similarity=-0.045  Sum_probs=177.3

Q ss_pred             CCeEEEEecCCceEEEEE-ecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCccccee-cccCCcceEEEEECCCCC
Q psy10867         14 SGAISVWEPKGGTLLMSY-KGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQL-RLICPGRISSMQASPDAA   91 (343)
Q Consensus        14 dg~i~iwd~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~-~~~~~~~v~~~~~s~~~~   91 (343)
                      ++.|.+||.. ++..... ..+.. .+.++++++++.+.++...++.|..|+.. ++.... .......+..+++.++++
T Consensus        35 ~~~v~~~d~~-~~~~~~~~~~~~~-~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~  111 (299)
T 2z2n_A           35 ANMISCINLD-GKITEYPLPTPDA-KVMCLTISSDGEVWFTENAANKIGRITKK-GIIKEYTLPNPDSAPYGITEGPNGD  111 (299)
T ss_dssp             TTEEEEECTT-CCEEEEECSSTTC-CEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSC
T ss_pred             CCcEEEEcCC-CCeEEecCCcccC-ceeeEEECCCCCEEEeCCCCCeEEEECCC-CcEEEEeCCCcCCCceeeEECCCCC
Confidence            5789999987 5543322 22344 78999999999988888766889999986 332221 112455789999999998


Q ss_pred             EEEEe-cCCeEEEEEccCCceEEE-ecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCcc
Q psy10867         92 YIAVS-IETKLHMWQISSGRLLAT-ASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGV  169 (343)
Q Consensus        92 ~l~~~-~d~~i~v~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~  169 (343)
                      ++++. .++.|.+||. +++.... ...+...+..+++.++++.+++...++.|..||. ++....              
T Consensus       112 l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~--------------  175 (299)
T 2z2n_A          112 IWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITE--------------  175 (299)
T ss_dssp             EEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEE--------------
T ss_pred             EEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEE--------------
Confidence            88875 5789999998 6654432 2334567899999999988887777889999998 543211              


Q ss_pred             ccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee---cCCcEEEEEEcCCCCEEEEEcC
Q psy10867        170 TGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI---LDTRLTCVAFDGTEDNIYMGTS  246 (343)
Q Consensus       170 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~---~~~~i~~~~~~~~~~~l~~~~~  246 (343)
                             .........+..+++++++  .++++...++.|.+||. +++... +.   ....+..++++++|+.+++...
T Consensus       176 -------~~~~~~~~~~~~i~~~~~g--~l~v~~~~~~~i~~~~~-~g~~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~~  244 (299)
T 2z2n_A          176 -------FKIPTPASGPVGITKGNDD--ALWFVEIIGNKIGRITT-SGEITE-FKIPTPNARPHAITAGAGIDLWFTEWG  244 (299)
T ss_dssp             -------EECSSTTCCEEEEEECTTS--SEEEEETTTTEEEEECT-TCCEEE-EECSSTTCCEEEEEECSTTCEEEEETT
T ss_pred             -------eeCCCCCCcceeEEECCCC--CEEEEccCCceEEEECC-CCcEEE-EECCCCCCCceeEEECCCCCEEEeccC
Confidence                   1112234567899999988  67777667889999998 666433 32   2356899999999986666667


Q ss_pred             CCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccce
Q psy10867        247 EGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQ  312 (343)
Q Consensus       247 d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~  312 (343)
                      ++.|..||...  ....+         .+..+...+.++++ ++++++++.. .+.|..++..+++
T Consensus       245 ~~~i~~~d~~g--~~~~~---------~~~~~~~~~~~i~~-~~g~l~v~~~-~~~l~~~~~~~~~  297 (299)
T 2z2n_A          245 ANKIGRLTSNN--IIEEY---------PIQIKSAEPHGICF-DGETIWFAME-CDKIGKLTLIKDN  297 (299)
T ss_dssp             TTEEEEEETTT--EEEEE---------ECSSSSCCEEEEEE-CSSCEEEEET-TTEEEEEEEC---
T ss_pred             CceEEEECCCC--ceEEE---------eCCCCCCccceEEe-cCCCEEEEec-CCcEEEEEcCccc
Confidence            88999999732  11111         12233467899999 8888776655 5677777776543

>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A

Probab=99.79  E-value=1.9e-16  Score=125.40  Aligned_cols=228  Identities=8%  Similarity=-0.032  Sum_probs=158.8

Q ss_pred             eEEE-ecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEE
Q psy10867          6 EVAF-SYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSM   84 (343)
Q Consensus         6 ~~~~-s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~   84 (343)
                      .+.+ +...++.|.+||..++........+.. .+.++++++++.++++.. ++.|.+|+..+.............+..+
T Consensus        36 ~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~-~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~~~~~~~~~~p~~i  113 (270)
T 1rwi_B           36 NVYVTSEGMYGRVVKLATGSTGTTVLPFNGLY-QPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQTVLPFDGLNYPEGL  113 (270)
T ss_dssp             CEEEEECSSSCEEEEECC-----EECCCCSCC-SCCCEEECTTCCEEEEET-TTEEEEECTTCSCCEECCCCSCSSEEEE
T ss_pred             CEEEEccCCCCcEEEecCCCcccceEeeCCcC-CcceeEECCCCCEEEEcC-CCEEEEEeCCCceEeeeecCCcCCCcce
Confidence            3444 334567888888755443322223334 788999999998777776 5899999987665433322333578999


Q ss_pred             EECCCCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCC
Q psy10867         85 QASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPG  163 (343)
Q Consensus        85 ~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~  163 (343)
                      ++.++|+++++ ..++.|.+|+..+.............+.+++++++++++++...++.|.+||........        
T Consensus       114 ~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~--------  185 (270)
T 1rwi_B          114 AVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVV--------  185 (270)
T ss_dssp             EECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEE--------
T ss_pred             EECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEe--------
Confidence            99999997777 457899999866554443333333467889999999977777778899999987653211        


Q ss_pred             CCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCCEEE
Q psy10867        164 SSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIY  242 (343)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~  242 (343)
                                    ....+...+..+++++++  .++++...++.|.+||........... ....+..++++++|+.++
T Consensus       186 --------------~~~~~~~~p~~i~~d~~g--~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v  249 (270)
T 1rwi_B          186 --------------LPFTDITAPWGIAVDEAG--TVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYV  249 (270)
T ss_dssp             --------------CCCSSCCSEEEEEECTTC--CEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEE
T ss_pred             --------------ecccCCCCceEEEECCCC--CEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEE
Confidence                          111223567899999998  677777778999999986654433221 235689999999999888


Q ss_pred             EEcCCCcEEEEEeeccc
Q psy10867        243 MGTSEGVIKSFCLRQVP  259 (343)
Q Consensus       243 ~~~~d~~i~i~d~~~~~  259 (343)
                      +...++.|+++++...+
T Consensus       250 ~~~~~~~v~~~~~~~~~  266 (270)
T 1rwi_B          250 ADRGNDRVVKLTSLEHH  266 (270)
T ss_dssp             EEGGGTEEEEECCCGGG
T ss_pred             EECCCCEEEEEcCCCcc
Confidence            88889999999987644

>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...

Probab=99.79  E-value=3.6e-16  Score=126.70  Aligned_cols=235  Identities=10%  Similarity=0.017  Sum_probs=163.5

Q ss_pred             cceEEEEeCCceEEEE-------EcCCCeEEEEeCCCcccceecc----cCCcceEEEEECCC-CCEEEEecCCeEEEEE
Q psy10867         38 SPHSMCLLGNDYVLGV-------EKGKPMIQAWPVNSQEKAQLRL----ICPGRISSMQASPD-AAYIAVSIETKLHMWQ  105 (343)
Q Consensus        38 ~v~~~~~~~~~~~~~~-------~~~~~~i~iw~~~~~~~~~~~~----~~~~~v~~~~~s~~-~~~l~~~~d~~i~v~~  105 (343)
                      .+.+++|++++.++++       +..++.|.+|+..+++......    ++...+..++++++ +++++++..+.|.+||
T Consensus        19 ~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~~l~~~d   98 (314)
T 1pjx_A           19 GAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLLVVQ   98 (314)
T ss_dssp             TCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTTEEEEEE
T ss_pred             CccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECCCCEEEEe
Confidence            6789999999988887       4555899999988776543322    14467899999999 8877776666899999


Q ss_pred             ccCCceEEE-ecc----cCCCeEEEEEecCCCEEEEecCC---------------CeEEEeecCccceeeeeecCCCCCC
Q psy10867        106 ISSGRLLAT-ASS----HYQPITIVKWSADSNFIVTGGED---------------GTICVWQLSRLICKQTVAFGIPGSS  165 (343)
Q Consensus       106 ~~~~~~~~~-~~~----~~~~v~~~~~~~~~~~l~s~~~d---------------g~i~iwd~~~~~~~~~~~~~~~~~~  165 (343)
                      .. ++.... ...    ....+.++++.++++++++...+               +.|..++.. ++..           
T Consensus        99 ~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~-----------  165 (314)
T 1pjx_A           99 TD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMI-----------  165 (314)
T ss_dssp             TT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEE-----------
T ss_pred             CC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEE-----------
Confidence            88 765443 221    12357899999999887776654               567777654 3211           


Q ss_pred             CCccccccceeeeecccccceEEEEee----cCCCceEE-EEeeCCCeEEEEecC-CCce-----EEEeecC--CcEEEE
Q psy10867        166 GKGVTGLTEPLHVKSQHSLPVTHVTLS----KLGAKSRV-ASVSHDRTCKIFDLC-TGED-----LLSLILD--TRLTCV  232 (343)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~v~~~~~~----~~~~~~~l-~~~~~d~~i~~wd~~-~~~~-----~~~~~~~--~~i~~~  232 (343)
                                  .+..+......++++    |++  +.+ ++...++.|.+||.+ +++.     ...+...  ..+..+
T Consensus       166 ------------~~~~~~~~~~~i~~~~~~d~dg--~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i  231 (314)
T 1pjx_A          166 ------------QVDTAFQFPNGIAVRHMNDGRP--YQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGM  231 (314)
T ss_dssp             ------------EEEEEESSEEEEEEEECTTSCE--EEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEE
T ss_pred             ------------EeccCCCCcceEEEecccCCCC--CEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCce
Confidence                        111233456788999    887  554 444568999999986 4432     1122212  568889


Q ss_pred             EEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEE-EEeCCCcEEEEeccc
Q psy10867        233 AFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLL-SSSADETLKIWHTIS  310 (343)
Q Consensus       233 ~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-s~~~dg~i~iwd~~~  310 (343)
                      +++++|+++++...++.|.+||..+...           ...+..+...+.+++|+|+++.|+ +...++.|..|++..
T Consensus       232 ~~d~~G~l~v~~~~~~~i~~~d~~~g~~-----------~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~  299 (314)
T 1pjx_A          232 DFDEDNNLLVANWGSSHIEVFGPDGGQP-----------KMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR  299 (314)
T ss_dssp             EEBTTCCEEEEEETTTEEEEECTTCBSC-----------SEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred             EECCCCCEEEEEcCCCEEEEEcCCCCcE-----------eEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence            9999999888877788999998764332           222334456789999999999554 555668899999864

>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}

Probab=99.78  E-value=1.2e-14  Score=116.85  Aligned_cols=261  Identities=7%  Similarity=-0.055  Sum_probs=186.1

Q ss_pred             cceEEEEeCCceEEEEEcCCCeEEEEeCCCccccee-cccCCcceEEEEECCCCCEEEEec-CCeEEEEEccCCceEE-E
Q psy10867         38 SPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQL-RLICPGRISSMQASPDAAYIAVSI-ETKLHMWQISSGRLLA-T  114 (343)
Q Consensus        38 ~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~-~~~~~~~v~~~~~s~~~~~l~~~~-d~~i~v~~~~~~~~~~-~  114 (343)
                      .+.++++.++|.+.++...++.|.+|+.. ++.... .......+..+++.+++.++++.. ++.|..||.. ++... .
T Consensus        21 ~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~   98 (300)
T 2qc5_A           21 GPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTEYP   98 (300)
T ss_dssp             CEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEE
T ss_pred             CcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEEec
Confidence            78999999999988888766899999988 554332 223346789999999999888754 6889999987 65432 2


Q ss_pred             ecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecC
Q psy10867        115 ASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKL  194 (343)
Q Consensus       115 ~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  194 (343)
                      +......+.++++.++++++++...++.|..+|.. +....                     .........+..+++.++
T Consensus        99 ~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~---------------------~~~~~~~~~~~~i~~d~~  156 (300)
T 2qc5_A           99 LPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYE---------------------YDLPNKGSYPAFITLGSD  156 (300)
T ss_dssp             CSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEE---------------------EECSSTTCCEEEEEECTT
T ss_pred             CCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEE---------------------ccCCCCCCCceeEEECCC
Confidence            22234678999999999988887778899999987 32211                     111223456889999998


Q ss_pred             CCceEEEEeeCCCeEEEEecCCCceEEEee---cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCC
Q psy10867        195 GAKSRVASVSHDRTCKIFDLCTGEDLLSLI---LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTS  271 (343)
Q Consensus       195 ~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~---~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~  271 (343)
                      +  +++++...++.|..+|. +++... +.   ....+..++++++++..++....+.|.+||... .. ...       
T Consensus       157 g--~l~v~~~~~~~i~~~~~-~g~~~~-~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~g-~~-~~~-------  223 (300)
T 2qc5_A          157 N--ALWFTENQNNSIGRITN-TGKLEE-YPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITTTG-EI-SEY-------  223 (300)
T ss_dssp             S--SEEEEETTTTEEEEECT-TCCEEE-EECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTTC-CE-EEE-------
T ss_pred             C--CEEEEecCCCeEEEECC-CCcEEE-eeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcCCC-cE-EEE-------
Confidence            8  66666666789999998 555443 33   234688999999998777776778899998722 11 111       


Q ss_pred             CCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeee-cc-cCCceEEEEEccCCCeeeec
Q psy10867        272 NPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRT-IQ-HKGPVLGAFLGLLPPAIHDY  338 (343)
Q Consensus       272 ~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~-~~-~~~~v~~~~~sp~~~~l~~~  338 (343)
                        ....+...+.+++++++|+++++...++.|..||. +++.... +. ....+.+++++++|+..++.
T Consensus       224 --~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~  289 (300)
T 2qc5_A          224 --DIPTPNARPHAITAGKNSEIWFTEWGANQIGRITN-DNTIQEYQLQTENAEPHGITFGKDGSVWFAL  289 (300)
T ss_dssp             --ECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECT-TSCEEEEECCSTTCCCCCEEECTTSCEEEEC
T ss_pred             --ECCCCCCCceEEEECCCCCEEEeccCCCeEEEECC-CCcEEEEECCccCCccceeEeCCCCCEEEEc
Confidence              11223456889999999997777767789999998 4543321 22 34668899999999876654

>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}

Probab=99.78  E-value=3.6e-17  Score=146.73  Aligned_cols=226  Identities=15%  Similarity=0.026  Sum_probs=155.2

Q ss_pred             CCcceEEEEECCCCCEEEEe------cCCeEEEEEccCCceEEEecccCCCe--EEEEEecCCCEEEEecCCCe------
Q psy10867         77 CPGRISSMQASPDAAYIAVS------IETKLHMWQISSGRLLATASSHYQPI--TIVKWSADSNFIVTGGEDGT------  142 (343)
Q Consensus        77 ~~~~v~~~~~s~~~~~l~~~------~d~~i~v~~~~~~~~~~~~~~~~~~v--~~~~~~~~~~~l~s~~~dg~------  142 (343)
                      |...+..++|||||++||.+      .+..|++||+.+++.+.  ..+...+  ..++|+||++.|+.++.|..      
T Consensus       119 ~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~--~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~  196 (695)
T 2bkl_A          119 GTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK--VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVD  196 (695)
T ss_dssp             SCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS--SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGG
T ss_pred             CCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC--CcccCcccccceEEecCCCEEEEEEecCCCCCccc
Confidence            44578999999999999941      23589999999988641  1122222  67999999999999888765      


Q ss_pred             -------EEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCC----eEEE
Q psy10867        143 -------ICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDR----TCKI  211 (343)
Q Consensus       143 -------i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~----~i~~  211 (343)
                             |++|++.++.....                  .+.....+...+..+.|+|+|  ++|+..+.++    .|++
T Consensus       197 ~~~~~~~v~~~~l~t~~~~~~------------------lv~~~~~~~~~~~~~~~SpDG--~~l~~~~~~~~~~~~l~~  256 (695)
T 2bkl_A          197 ERPGYTTIRYHTLGTEPSKDT------------------VVHERTGDPTTFLQSDLSRDG--KYLFVYILRGWSENDVYW  256 (695)
T ss_dssp             GGGGGCEEEEEETTSCGGGCE------------------EEECCCCCTTCEEEEEECTTS--CCEEEEEEETTTEEEEEE
T ss_pred             cCCCCCEEEEEECCCCchhce------------------EEEecCCCCEEEEEEEECCCC--CEEEEEEeCCCCceEEEE
Confidence                   99999987642111                  222333455678899999999  6777666555    7788


Q ss_pred             EecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcC----CCcEEEEEeecccccccccccCCCCCCccccc--cCcEEEE
Q psy10867        212 FDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTS----EGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGH--EKQVTSL  285 (343)
Q Consensus       212 wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~----d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~  285 (343)
                      ||..+++...............+ ++++ ++..+.    ++.|.+||+.+.....         ...+..+  ...+..+
T Consensus       257 ~~~~~~~~~~l~~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~---------~~~l~~~~~~~~l~~~  325 (695)
T 2bkl_A          257 KRPGEKDFRLLVKGVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARAS---------WKEIVPEDSSASLLSV  325 (695)
T ss_dssp             ECTTCSSCEEEEECSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGG---------CEEEECCCSSCEEEEE
T ss_pred             EcCCCCceEEeecCCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccC---------CeEEecCCCCCeEEEE
Confidence            87766655444445555566666 5666 554433    5789999987643210         1112222  4457888


Q ss_pred             EEccCCCEEEEEeCCCcEEEEecc-cceeeeecc-c-CCceEEEEEccCCCeee
Q psy10867        286 SCSITGITLLSSSADETLKIWHTI-SRQCLRTIQ-H-KGPVLGAFLGLLPPAIH  336 (343)
Q Consensus       286 ~~s~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~-~-~~~v~~~~~sp~~~~l~  336 (343)
                      +|+ ++.++++...|+..++|.+. +++.+..+. + .+.+..++++|+++.|+
T Consensus       326 ~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~  378 (695)
T 2bkl_A          326 SIV-GGHLSLEYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAY  378 (695)
T ss_dssp             EEE-TTEEEEEEEETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEE
T ss_pred             EEE-CCEEEEEEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEE
Confidence            888 77788899999988888665 466566665 3 66788899999998776

>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*

Probab=99.78  E-value=3.3e-15  Score=123.22  Aligned_cols=265  Identities=7%  Similarity=-0.141  Sum_probs=176.0

Q ss_pred             EeCCceEEEEEcC--CC---eEEEEeCCCcccceecccCCcceEEEEECCCCCEEEEec-----------CCeEEEEEcc
Q psy10867         44 LLGNDYVLGVEKG--KP---MIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSI-----------ETKLHMWQIS  107 (343)
Q Consensus        44 ~~~~~~~~~~~~~--~~---~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-----------d~~i~v~~~~  107 (343)
                      ..|++..+.....  ..   .|.++|..+++.+..+.....+  .++++|||+++..+.           ++.|.+||..
T Consensus        28 ~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~  105 (373)
T 2mad_H           28 PGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPV  105 (373)
T ss_pred             CCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECC
Confidence            3466665555442  23   8899999998877555443333  999999999888742           5689999999


Q ss_pred             CCceEEEeccc-------CCCeEEEEEecCCCEEEEecC--CCeEEEeecCccceeee-eecCCCCCCCCccccccceee
Q psy10867        108 SGRLLATASSH-------YQPITIVKWSADSNFIVTGGE--DGTICVWQLSRLICKQT-VAFGIPGSSGKGVTGLTEPLH  177 (343)
Q Consensus       108 ~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~s~~~--dg~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  177 (343)
                      +.+.+..+...       ......+.|+|||++|+.+..  ++.|.++| .+++.... +.                   
T Consensus       106 t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~-------------------  165 (373)
T 2mad_H          106 TFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLS-------------------  165 (373)
T ss_pred             CCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcC-------------------
Confidence            88887766422       123458999999999998874  57899999 88754433 21                   


Q ss_pred             eecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee------cCCc-EEEEEEcCCCCEEEEEcCCCcE
Q psy10867        178 VKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI------LDTR-LTCVAFDGTEDNIYMGTSEGVI  250 (343)
Q Consensus       178 ~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~------~~~~-i~~~~~~~~~~~l~~~~~d~~i  250 (343)
                          ..   .++.+.|.++ ..+++.+.||.+.++|. +++......      ...+ .....+.+++..++..+..+.+
T Consensus       166 ----~~---~~~~~~~~~~-~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v  236 (373)
T 2mad_H          166 ----SP---TCYHIHPGAP-STFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKI  236 (373)
T ss_pred             ----CC---ceEEEEeCCC-ceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceE
Confidence                11   1245566664 56677788999999999 887663322      1112 2335667776665555578899


Q ss_pred             EEEEeecccccc--cccccCCCCCCccccccCcEEEEEEccCCCEEEEEeC----------CCcEEEEecccceeeeecc
Q psy10867        251 KSFCLRQVPRTR--DHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSA----------DETLKIWHTISRQCLRTIQ  318 (343)
Q Consensus       251 ~i~d~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~----------dg~i~iwd~~~~~~~~~~~  318 (343)
                      .+.|+.......  .+....... ............+.++|+++.++.+..          ++.|.++|+.+++.+.++.
T Consensus       237 ~vid~~~~~~~v~~~~~~~~~~~-~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~  315 (373)
T 2mad_H          237 LQADISAAGATNKAPIDALSGGR-KADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQIS  315 (373)
T ss_pred             EEEeccCCcceEeeeeeecCCcc-cccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEE
Confidence            999986532111  110000000 000001223445789999988777643          3579999999999999998


Q ss_pred             cCCceEEEEEccCCC-eeeeccc
Q psy10867        319 HKGPVLGAFLGLLPP-AIHDYDF  340 (343)
Q Consensus       319 ~~~~v~~~~~sp~~~-~l~~~~~  340 (343)
                      .......++|+|||+ .++++..
T Consensus       316 ~g~~p~~i~~s~Dg~~~l~v~~~  338 (373)
T 2mad_H          316 LGHDVDAISVAQDGGPDLYALSA  338 (373)
T ss_pred             CCCCcCeEEECCCCCeEEEEEcC
Confidence            666789999999999 6777653

>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...

Probab=99.77  E-value=1.9e-15  Score=122.37  Aligned_cols=234  Identities=8%  Similarity=-0.002  Sum_probs=160.8

Q ss_pred             CcceEEEEECCCCCEEEE--------ecCCeEEEEEccCCceEEEec----ccCCCeEEEEEecC-CCEEEEecCCCeEE
Q psy10867         78 PGRISSMQASPDAAYIAV--------SIETKLHMWQISSGRLLATAS----SHYQPITIVKWSAD-SNFIVTGGEDGTIC  144 (343)
Q Consensus        78 ~~~v~~~~~s~~~~~l~~--------~~d~~i~v~~~~~~~~~~~~~----~~~~~v~~~~~~~~-~~~l~s~~~dg~i~  144 (343)
                      .....+++|++++.++++        ..++.|.+||..+++......    ++...+.+++++++ ++++++.. .+.|.
T Consensus        17 ~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~-~~~l~   95 (314)
T 1pjx_A           17 IPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM-RLGLL   95 (314)
T ss_dssp             CTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET-TTEEE
T ss_pred             CCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC-CCCEE
Confidence            345689999999998887        567899999988887643322    24567899999998 76555544 44788


Q ss_pred             EeecCccceeee-eecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCC---------------Ce
Q psy10867        145 VWQLSRLICKQT-VAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHD---------------RT  208 (343)
Q Consensus       145 iwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d---------------~~  208 (343)
                      +||.. ++.... ..                .  ........+..+++++++  .++++...+               +.
T Consensus        96 ~~d~~-g~~~~~~~~----------------~--~~~~~~~~~~~i~~d~~g--~l~v~~~~~~~~~~~~~~~~~~~~~~  154 (314)
T 1pjx_A           96 VVQTD-GTFEEIAKK----------------D--SEGRRMQGCNDCAFDYEG--NLWITAPAGEVAPADYTRSMQEKFGS  154 (314)
T ss_dssp             EEETT-SCEEECCSB----------------C--TTSCBCBCCCEEEECTTS--CEEEEECBCBCTTSCCCBTTSSSCEE
T ss_pred             EEeCC-CCEEEEEec----------------c--CCCccccCCcCEEECCCC--CEEEEecCcccccccccccccCCCCe
Confidence            99987 532211 00                0  000122457899999998  677666554               57


Q ss_pred             EEEEecCCCceEEEeecCCcEEEEEEc----CCCCEEEEE-cCCCcEEEEEeecccccccccccCCCCCCcccccc-CcE
Q psy10867        209 CKIFDLCTGEDLLSLILDTRLTCVAFD----GTEDNIYMG-TSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHE-KQV  282 (343)
Q Consensus       209 i~~wd~~~~~~~~~~~~~~~i~~~~~~----~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~v  282 (343)
                      |..||.. ++.............++++    |+++.|+++ ..++.|.+||+.........     .....+..+. ..+
T Consensus       155 l~~~~~~-g~~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~-----~~~~~~~~~~~~~p  228 (314)
T 1pjx_A          155 IYCFTTD-GQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENK-----KVWGHIPGTHEGGA  228 (314)
T ss_dssp             EEEECTT-SCEEEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEE-----EEEEECCCCSSCEE
T ss_pred             EEEECCC-CCEEEeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccc-----eEEEECCCCCCCCC
Confidence            8888865 5554433444557889999    999776655 56789999998631111000     0011223333 567


Q ss_pred             EEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc-cCCceEEEEEccCCCeeeecc
Q psy10867        283 TSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVLGAFLGLLPPAIHDYD  339 (343)
Q Consensus       283 ~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~  339 (343)
                      ..++++++|+++++...++.|.+||..+++.+..+. +...+.+++|+|+++.|++++
T Consensus       229 ~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~  286 (314)
T 1pjx_A          229 DGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTE  286 (314)
T ss_dssp             EEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEE
T ss_pred             CceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEe
Confidence            889999999988888888999999998788777776 557899999999999666554

>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}

Probab=99.76  E-value=2.3e-16  Score=130.74  Aligned_cols=278  Identities=12%  Similarity=0.045  Sum_probs=185.1

Q ss_pred             CeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEc----------CCCeEEEEeCCCcccceecccC-------
Q psy10867         15 GAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEK----------GKPMIQAWPVNSQEKAQLRLIC-------   77 (343)
Q Consensus        15 g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~----------~~~~i~iw~~~~~~~~~~~~~~-------   77 (343)
                      +.|.+.|..+++.+.++..... +  .++++||++.+..+.          .++.|.++|..+.+.+......       
T Consensus        99 ~~VsVID~~t~~vv~~I~vG~~-P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~  175 (426)
T 3c75_H           99 TQQFVIDGSTGRILGMTDGGFL-P--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLV  175 (426)
T ss_dssp             EEEEEEETTTTEEEEEEEECSS-C--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCB
T ss_pred             CeEEEEECCCCEEEEEEECCCC-C--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCcccccc
Confidence            7999999999999999987765 5  899999997666554          3478999999998877544311       


Q ss_pred             CcceEEEEECCCCCEEEEe-c--CCeEEEEEccCCceEEEecccCCCeEEEEEecCC-CEEEEecCCCeEEEeecCccce
Q psy10867         78 PGRISSMQASPDAAYIAVS-I--ETKLHMWQISSGRLLATASSHYQPITIVKWSADS-NFIVTGGEDGTICVWQLSRLIC  153 (343)
Q Consensus        78 ~~~v~~~~~s~~~~~l~~~-~--d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~  153 (343)
                      ......++|+|||++|.++ .  ++.|.+.|+.+++.+..+....  .  ....|++ ..+++.+.||.+.+.+..+++.
T Consensus       176 g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g--~--~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v  251 (426)
T 3c75_H          176 GTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPD--C--YHIFPASPTVFYMNCRDGSLARVDFADGET  251 (426)
T ss_dssp             SCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS--E--EEEEEEETTEEEEEETTSSEEEEECCTTCC
T ss_pred             CCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCC--c--eeeccCCCcEEEEEcCCCCEEEEECCCCcE
Confidence            1234678999999988874 2  5789999999999888776421  1  2334433 4556666778877777744432


Q ss_pred             eeeeecCCCCCCCCccccccceeeeecccccc-eEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEE--Eeec-----
Q psy10867        154 KQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLP-VTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLL--SLIL-----  225 (343)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~--~~~~-----  225 (343)
                      .....                  ..+.....+ ...+.+.+++  ..++..+..+.+.+.|........  .+..     
T Consensus       252 ~~~~~------------------~~~~v~~~p~~~~~~~~~dg--~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~  311 (426)
T 3c75_H          252 KVTNT------------------EVFHTEDELLINHPAFSLRS--GRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAE  311 (426)
T ss_dssp             EEEEC------------------CCCSCTTSCBCSCCEECTTT--CEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTT
T ss_pred             EEEee------------------eeeccCCCceeeEeeecCCC--CEEEEEeCCCcEEEEeccCCceEEeeeeeeccccc
Confidence            21100                  000001111 1134667887  445555667899999986554221  1110     


Q ss_pred             ------CCcEEEEEEcCCCCEEEEEcC----------CCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEcc
Q psy10867        226 ------DTRLTCVAFDGTEDNIYMGTS----------EGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSI  289 (343)
Q Consensus       226 ------~~~i~~~~~~~~~~~l~~~~~----------d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~  289 (343)
                            ......++++|+++.+++...          ++.|.++|+.+.+....           +.. ......+.|+|
T Consensus       312 i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~-----------I~v-g~~P~gia~sp  379 (426)
T 3c75_H          312 RADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINK-----------IEL-GHEIDSINVSQ  379 (426)
T ss_dssp             GGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEE-----------EEE-EEEECEEEECC
T ss_pred             cccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEE-----------EEC-CCCcCeEEEcc
Confidence                  111223689999998888643          35799999988665433           221 23578999999


Q ss_pred             CCC-EEEEEe-CCCcEEEEecccceeeeecccCCceEEEEEccC
Q psy10867        290 TGI-TLLSSS-ADETLKIWHTISRQCLRTIQHKGPVLGAFLGLL  331 (343)
Q Consensus       290 ~~~-~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~  331 (343)
                      ||+ ++++.. .++.|.++|+.+++.+.++...+.-..+..+||
T Consensus       380 Dg~~~lyv~n~~s~~VsVID~~t~kvv~tI~~vG~~P~~i~~~~  423 (426)
T 3c75_H          380 DAEPLLYALSAGTQTLHIYDAATGEELRSVDQLGRGPQIITTHD  423 (426)
T ss_dssp             SSSCEEEEEETTTTEEEEEETTTCCEEEEECCCSSSCCEEECCC
T ss_pred             CCCEEEEEEcCCCCeEEEEECCCCCEEEEecCCCCCCcEEEcCC
Confidence            999 888887 589999999999999999742222222555554

>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}

Probab=99.75  E-value=7.1e-14  Score=112.26  Aligned_cols=258  Identities=7%  Similarity=-0.000  Sum_probs=176.1

Q ss_pred             EecCCCCeEEEEecCCceEEE-EEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCccccee-cccCCcceEEEEE
Q psy10867          9 FSYDGSGAISVWEPKGGTLLM-SYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQL-RLICPGRISSMQA   86 (343)
Q Consensus         9 ~s~~~dg~i~iwd~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~-~~~~~~~v~~~~~   86 (343)
                      ++...++.|.+||.. ++... .+..... .+.++++.+++.+.++...++.|..||.. ++.... .......+..+++
T Consensus        35 v~~~~~~~v~~~~~~-~~~~~~~~~~~~~-~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~  111 (300)
T 2qc5_A           35 FTQHKANKISSLDQS-GRIKEFEVPTPDA-KVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITE  111 (300)
T ss_dssp             EEETTTTEEEEECTT-SCEEEEECSSTTC-CEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEE
T ss_pred             EEcCCCCeEEEECCC-CceEEEECCCCCC-cceeEEECCCCCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCccceE
Confidence            333346889999987 55443 2222334 78999999999888887766899999988 544322 2223467899999


Q ss_pred             CCCCCEEEEec-CCeEEEEEccCCceEE-EecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCC
Q psy10867         87 SPDAAYIAVSI-ETKLHMWQISSGRLLA-TASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGS  164 (343)
Q Consensus        87 s~~~~~l~~~~-d~~i~v~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~  164 (343)
                      .++++++++.. ++.|..++.. ++... .+......+..+++.+++++.++...++.|..+|. ++....         
T Consensus       112 ~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~---------  180 (300)
T 2qc5_A          112 GLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEE---------  180 (300)
T ss_dssp             CSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEE---------
T ss_pred             CCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEE---------
Confidence            99999888754 7799999987 65543 23334567899999999997777776789999998 432211         


Q ss_pred             CCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEe-e-cCCcEEEEEEcCCCCEEE
Q psy10867        165 SGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSL-I-LDTRLTCVAFDGTEDNIY  242 (343)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~-~-~~~~i~~~~~~~~~~~l~  242 (343)
                                  .....+...+..+++.+++  .++++....+.|.+||. +++..... . ....+.+++++++++..+
T Consensus       181 ------------~~~~~~~~~~~~i~~d~~g--~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v  245 (300)
T 2qc5_A          181 ------------YPLPTNAAAPVGITSGNDG--ALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWF  245 (300)
T ss_dssp             ------------EECSSTTCCEEEEEECTTS--SEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEE
T ss_pred             ------------eeCCCCCCCcceEEECCCC--CEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEE
Confidence                        1112234568899999988  67776666788999998 55543321 1 245688999999998766


Q ss_pred             EEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEec
Q psy10867        243 MGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHT  308 (343)
Q Consensus       243 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~  308 (343)
                      +...++.|..||... . ....         .+......+.+++++++|+++++.. . .|..+|.
T Consensus       246 ~~~~~~~i~~~~~~g-~-~~~~---------~~~~~~~~~~~i~~~~~g~l~v~~~-~-~i~~~~p  298 (300)
T 2qc5_A          246 TEWGANQIGRITNDN-T-IQEY---------QLQTENAEPHGITFGKDGSVWFALK-C-KIGKLNL  298 (300)
T ss_dssp             EETTTTEEEEECTTS-C-EEEE---------ECCSTTCCCCCEEECTTSCEEEECS-S-EEEEEEE
T ss_pred             eccCCCeEEEECCCC-c-EEEE---------ECCccCCccceeEeCCCCCEEEEcc-C-ceEEeCC
Confidence            666678999998732 1 1111         1122334578899999998666655 4 6766664

>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B

Probab=99.74  E-value=3.1e-14  Score=114.24  Aligned_cols=230  Identities=11%  Similarity=0.012  Sum_probs=146.9

Q ss_pred             cceEEEEeC-CceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEEecCCeEEEEEccCCceEEEec
Q psy10867         38 SPHSMCLLG-NDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATAS  116 (343)
Q Consensus        38 ~v~~~~~~~-~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~  116 (343)
                      -..+..|+| ++.++.+...++.|..||..+++... . .....+.+++++++|+++++. ++.|.+||.++++......
T Consensus        14 ~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~-~-~~~~~~~~i~~~~dG~l~v~~-~~~l~~~d~~~g~~~~~~~   90 (297)
T 3g4e_A           14 CGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQR-V-TMDAPVSSVALRQSGGYVATI-GTKFCALNWKEQSAVVLAT   90 (297)
T ss_dssp             BEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEE-E-ECSSCEEEEEEBTTSSEEEEE-TTEEEEEETTTTEEEEEEE
T ss_pred             cccCCeEECCCCEEEEEECCCCEEEEEECCCCcEEE-E-eCCCceEEEEECCCCCEEEEE-CCeEEEEECCCCcEEEEEe
Confidence            556889998 46788888777999999998876532 2 345679999999999966665 6789999998876543322


Q ss_pred             c----cCCCeEEEEEecCCCEEEEecCC---------CeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccc
Q psy10867        117 S----HYQPITIVKWSADSNFIVTGGED---------GTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHS  183 (343)
Q Consensus       117 ~----~~~~v~~~~~~~~~~~l~s~~~d---------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (343)
                      .    ....+..++++|+|+++++...+         ..-.+|.+....                      .......+.
T Consensus        91 ~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g----------------------~~~~~~~~~  148 (297)
T 3g4e_A           91 VDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH----------------------HVKKYFDQV  148 (297)
T ss_dssp             CCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS----------------------CEEEEEEEE
T ss_pred             cCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC----------------------CEEEEeecc
Confidence            1    12357889999999966654221         122333332210                      000111122


Q ss_pred             cceEEEEeecCCCceEEEEeeCCCeEEEEecC--CCceEEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeeccccc
Q psy10867        184 LPVTHVTLSKLGAKSRVASVSHDRTCKIFDLC--TGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRT  261 (343)
Q Consensus       184 ~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~--~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~  261 (343)
                      ...+.++|+|+++ .++++.+.++.|.+||+.  ++.....                            ++         
T Consensus       149 ~~pngi~~spdg~-~lyv~~~~~~~i~~~~~d~~~G~~~~~----------------------------~~---------  190 (297)
T 3g4e_A          149 DISNGLDWSLDHK-IFYYIDSLSYSVDAFDYDLQTGQISNR----------------------------RS---------  190 (297)
T ss_dssp             SBEEEEEECTTSC-EEEEEEGGGTEEEEEEECTTTCCEEEE----------------------------EE---------
T ss_pred             ccccceEEcCCCC-EEEEecCCCCcEEEEeccCCCCcccCc----------------------------EE---------
Confidence            3345566666652 233344445556666542  2221000                            00         


Q ss_pred             ccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc-cCCceEEEEEc-cCCCeeeecc
Q psy10867        262 RDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVLGAFLG-LLPPAIHDYD  339 (343)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~s-p~~~~l~~~~  339 (343)
                                ...+..+...+..++++++|++.++...++.|..||..+++.+..+. +...+++++|. |+++.|+.++
T Consensus       191 ----------~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~  260 (297)
T 3g4e_A          191 ----------VYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVTC  260 (297)
T ss_dssp             ----------EEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBEEEEEEESGGGCEEEEEE
T ss_pred             ----------EEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCceEEEEeCCCCCEEEEEc
Confidence                      01111223457789999999888888788899999999899998888 55789999998 8988887655


Q ss_pred             c
Q psy10867        340 F  340 (343)
Q Consensus       340 ~  340 (343)
                      .
T Consensus       261 ~  261 (297)
T 3g4e_A          261 A  261 (297)
T ss_dssp             B
T ss_pred             C
Confidence            3

>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}

Probab=99.74  E-value=2.5e-14  Score=119.60  Aligned_cols=249  Identities=8%  Similarity=-0.027  Sum_probs=163.4

Q ss_pred             cceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEEe-cCC--eEEEEEccCCceEEE
Q psy10867         38 SPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVS-IET--KLHMWQISSGRLLAT  114 (343)
Q Consensus        38 ~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~d~--~i~v~~~~~~~~~~~  114 (343)
                      .+..+++++++.++++...++.|++||.+++......... .... ++|+|+++.|+++ .++  .|.+++...+.....
T Consensus       132 ~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~-~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~  209 (409)
T 3hrp_A          132 YMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGF-KGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTR  209 (409)
T ss_dssp             CEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETC-CBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEE
T ss_pred             CceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccC-CCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeEE
Confidence            6789999999999888887789999999887765444332 2333 9999999877763 434  899999887655444


Q ss_pred             e----cccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccc--eEE
Q psy10867        115 A----SSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLP--VTH  188 (343)
Q Consensus       115 ~----~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--v~~  188 (343)
                      +    ......+.+++++|++..|+.+..++.|..||..+.........                  ...++...  ...
T Consensus       210 ~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~------------------~~~g~~~~~P~~~  271 (409)
T 3hrp_A          210 IGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQL------------------ELSGSLGTNPGPY  271 (409)
T ss_dssp             EEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEEC------------------CCCSCCCCSSCCE
T ss_pred             eeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecc------------------cccCCCCCCcccc
Confidence            4    22445678899999555555577788999999987542111000                  01111111  128


Q ss_pred             EEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecC---------------CcEEEEEEcCCCCEEEEEc-CCCcEEE
Q psy10867        189 VTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILD---------------TRLTCVAFDGTEDNIYMGT-SEGVIKS  252 (343)
Q Consensus       189 ~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~---------------~~i~~~~~~~~~~~l~~~~-~d~~i~i  252 (343)
                      ++|+|++. .++++-..++.|+.|+... +........               .....++++|+|+++++-. .++.|+.
T Consensus       272 ia~~p~~g-~lyv~d~~~~~I~~~~~~g-~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~  349 (409)
T 3hrp_A          272 LIYYFVDS-NFYMSDQNLSSVYKITPDG-ECEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRK  349 (409)
T ss_dssp             EEEETTTT-EEEEEETTTTEEEEECTTC-CEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEE
T ss_pred             EEEeCCCC-EEEEEeCCCCEEEEEecCC-CEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEE
Confidence            99999532 6777777889999999754 322222221               3478999999999777777 7899999


Q ss_pred             EEeecccccccccc--cCC-CCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEec
Q psy10867        253 FCLRQVPRTRDHHI--QDS-TSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHT  308 (343)
Q Consensus       253 ~d~~~~~~~~~~~~--~~~-~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~  308 (343)
                      |++...........  ..+ ..-......-.....+++++++.++++-..++.|+.+++
T Consensus       350 ~~~~~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~  408 (409)
T 3hrp_A          350 LDILDGYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV  408 (409)
T ss_dssp             EETTTTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred             EECCCCEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence            99644321110000  000 000000011246889999999988888888888988775

>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}

Probab=99.73  E-value=9.4e-16  Score=138.53  Aligned_cols=224  Identities=13%  Similarity=0.108  Sum_probs=150.3

Q ss_pred             cceEEEEECCCCCEEEEe--cC----CeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCe----------
Q psy10867         79 GRISSMQASPDAAYIAVS--IE----TKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGT----------  142 (343)
Q Consensus        79 ~~v~~~~~s~~~~~l~~~--~d----~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~----------  142 (343)
                      ..+..++|||||++||.+  .+    ..|++||+.+++.+... .+...+..++|+|| +.|+.++.++.          
T Consensus       163 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~-~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~  240 (741)
T 1yr2_A          163 TALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADE-LKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALN  240 (741)
T ss_dssp             EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEE-EEEEESCCCEESTT-SEEEEEECCCC--------CC
T ss_pred             EEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCcc-CCCceeccEEEECC-CEEEEEEecCcccccccccCC
Confidence            468899999999999863  22    36999999999876532 12222357899999 98888776553          


Q ss_pred             ----EEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCC-----CeEEEEe
Q psy10867        143 ----ICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHD-----RTCKIFD  213 (343)
Q Consensus       143 ----i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d-----~~i~~wd  213 (343)
                          |++|++.++.....                  .+.....+...+..+.|+|+|  ++|+..+.+     ..|++||
T Consensus       241 ~~~~v~~~~lgt~~~~~~------------------lv~~~~~~~~~~~~~~~SpDG--~~l~~~~~~~~~~~~~l~~~d  300 (741)
T 1yr2_A          241 YNQTVWLHRLGTPQSADQ------------------PVFATPELPKRGHGASVSSDG--RWVVITSSEGTDPVNTVHVAR  300 (741)
T ss_dssp             CCCEEEEEETTSCGGGCE------------------EEECCTTCTTCEEEEEECTTS--CEEEEEEECTTCSCCEEEEEE
T ss_pred             CCCEEEEEECCCCchhCE------------------EEeccCCCCeEEEEEEECCCC--CEEEEEEEccCCCcceEEEEE
Confidence                88888876532111                  222222333458899999999  677766644     4899999


Q ss_pred             cCCC--ceEEEee-cCCcEEEEEEcCCCCEEEEEcC----CCcEEEEEeeccc-ccccccccCCCCCCccccccCcEEEE
Q psy10867        214 LCTG--EDLLSLI-LDTRLTCVAFDGTEDNIYMGTS----EGVIKSFCLRQVP-RTRDHHIQDSTSNPDFIGHEKQVTSL  285 (343)
Q Consensus       214 ~~~~--~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~----d~~i~i~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~  285 (343)
                      +.++  +....+. ........ ++|+++.|+..+.    ++.|.+||+.... ..          ...+..+...+..+
T Consensus       301 ~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~----------~~l~~~~~~~l~~~  369 (741)
T 1yr2_A          301 VTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRF----------DTVVPESKDNLESV  369 (741)
T ss_dssp             EETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEE----------EEEECCCSSEEEEE
T ss_pred             CCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCcccc----------EEEecCCCCeEEEE
Confidence            9877  4133333 33344444 3488998888765    3459999987632 11          11123344456677


Q ss_pred             EEccCCCEEEEEeCCCcEEEEecc-cceeeeecc--cCCceEEEEEccCCCeee
Q psy10867        286 SCSITGITLLSSSADETLKIWHTI-SRQCLRTIQ--HKGPVLGAFLGLLPPAIH  336 (343)
Q Consensus       286 ~~s~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~--~~~~v~~~~~sp~~~~l~  336 (343)
                      +++ ++.++++...|+..++|.+. +++....+.  ..+.+..+.++|+++.|+
T Consensus       370 ~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~  422 (741)
T 1yr2_A          370 GIA-GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAY  422 (741)
T ss_dssp             EEE-BTEEEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEE
T ss_pred             EEE-CCEEEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEE
Confidence            887 66788888899988777654 466666665  467789999999998766

>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*

Probab=99.72  E-value=7.9e-15  Score=119.96  Aligned_cols=170  Identities=14%  Similarity=0.101  Sum_probs=135.0

Q ss_pred             cceEEEEeCCceEEEEEcCCCeEEEEeCCCcc---------cc-eecccCCcceEEEEECCCCCEEEEecCCeEEEEEcc
Q psy10867         38 SPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQE---------KA-QLRLICPGRISSMQASPDAAYIAVSIETKLHMWQIS  107 (343)
Q Consensus        38 ~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~---------~~-~~~~~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~  107 (343)
                      .+..+++++...++++|+.+ .+.+|++++.+         .. .....+.. |+.++|  |+++|+++.++.|++||+.
T Consensus        39 ~~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~~~~~l~v~dv~  114 (388)
T 1xip_A           39 SLQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVSTRNALYSLDLE  114 (388)
T ss_dssp             CCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEEESSEEEEEESS
T ss_pred             cccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEEcCCcEEEEEch
Confidence            68999999998888888874 67789876544         11 12234566 999999  9999998899999999998


Q ss_pred             CCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceE
Q psy10867        108 SGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVT  187 (343)
Q Consensus       108 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  187 (343)
                      +.........|..++.++.+.+.  .+++++.||.|.+||+.++...                          .+...|+
T Consensus       115 sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~--------------------------~~~~~Vs  166 (388)
T 1xip_A          115 ELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTK--------------------------QLAQNVT  166 (388)
T ss_dssp             STTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEE--------------------------EEEESEE
T ss_pred             hhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCccc--------------------------cccCCce
Confidence            87766667778888988887654  3888899999999999875321                          1456899


Q ss_pred             EEEeecCCCceEEEEeeCCCeEEEEecCCCce--EEEe------e----cCCcEEEEEEcCCCCEEEE
Q psy10867        188 HVTLSKLGAKSRVASVSHDRTCKIFDLCTGED--LLSL------I----LDTRLTCVAFDGTEDNIYM  243 (343)
Q Consensus       188 ~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~--~~~~------~----~~~~i~~~~~~~~~~~l~~  243 (343)
                      +++|+|+|    ++.|..||.+++|+.+.++.  ..++      .    +...|.++.|.+++.++++
T Consensus       167 ~v~WSpkG----~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~  230 (388)
T 1xip_A          167 SFDVTNSQ----LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV  230 (388)
T ss_dssp             EEEECSSE----EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred             EEEEcCCc----eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence            99999987    57788999999999877765  5555      2    4677999999999998887

>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...

Probab=99.72  E-value=2.8e-15  Score=122.07  Aligned_cols=267  Identities=7%  Similarity=-0.079  Sum_probs=175.0

Q ss_pred             EEEeCCceEEEEEcC-----CCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEEec-----------CCeEEEEE
Q psy10867         42 MCLLGNDYVLGVEKG-----KPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSI-----------ETKLHMWQ  105 (343)
Q Consensus        42 ~~~~~~~~~~~~~~~-----~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-----------d~~i~v~~  105 (343)
                      ....|++..+.....     ++.|.++|..+++.+........+ . ++++|||+++.++.           ++.|.+||
T Consensus        38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD  115 (386)
T 3sjl_D           38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFD  115 (386)
T ss_dssp             CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred             eccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEE
Confidence            445688755555543     479999999999988666544444 4 99999999776532           56899999


Q ss_pred             ccCCceEEEecccC-------CCeEEEEEecCCCEEEEecC--CCeEEEeecCccceeeeeecCCCCCCCCcccccccee
Q psy10867        106 ISSGRLLATASSHY-------QPITIVKWSADSNFIVTGGE--DGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPL  176 (343)
Q Consensus       106 ~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  176 (343)
                      ..+++.+..+.-..       .....+.|+|||++++.+..  ++.|.++|+.+.+...++..                 
T Consensus       116 ~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v-----------------  178 (386)
T 3sjl_D          116 PVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDV-----------------  178 (386)
T ss_dssp             TTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEEC-----------------
T ss_pred             CCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEEC-----------------
Confidence            99999888774321       23567999999999888764  68999999999876665431                 


Q ss_pred             eeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCC-CceEEEee-c----CCcE-EEEEEc-CCCCEEEEEcCCC
Q psy10867        177 HVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCT-GEDLLSLI-L----DTRL-TCVAFD-GTEDNIYMGTSEG  248 (343)
Q Consensus       177 ~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~-~~~~~~~~-~----~~~i-~~~~~~-~~~~~l~~~~~d~  248 (343)
                           . +   +..+.|.+. ..+++.+.||.+.+.++.+ ++...... .    ..++ ....|. ++|++++ .+.+|
T Consensus       179 -----~-g---~~~~~P~g~-~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g  247 (386)
T 3sjl_D          179 -----P-D---CYHIFPTAP-DTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTG  247 (386)
T ss_dssp             -----C-S---EEEEEEEET-TEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTS
T ss_pred             -----C-C---cceeecCCC-ceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEE-EeCCC
Confidence                 0 0   112234433 4666778888888888876 55432211 1    1122 124554 6776555 45589


Q ss_pred             cEEEEEeeccccc--ccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeC----------CCcEEEEecccceeeee
Q psy10867        249 VIKSFCLRQVPRT--RDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSA----------DETLKIWHTISRQCLRT  316 (343)
Q Consensus       249 ~i~i~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~----------dg~i~iwd~~~~~~~~~  316 (343)
                      .|++.|+......  ..+.+.... .....-.......++++++++.++....          .+.|.+.|+.+++.+.+
T Consensus       248 ~V~v~d~~~~~~~v~~~~~~~~~~-~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~  326 (386)
T 3sjl_D          248 KIHQIDLSSGDAKFLPAVEALTEA-ERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAK  326 (386)
T ss_dssp             EEEEEECTTSSCEECCCEESSCHH-HHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEE
T ss_pred             EEEEEECCCCcceeecceeccccc-cccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEE
Confidence            9999998754321  111000000 0000001223335777999988776643          25799999999999999


Q ss_pred             cccCCceEEEEEccCCC-eeeecc
Q psy10867        317 IQHKGPVLGAFLGLLPP-AIHDYD  339 (343)
Q Consensus       317 ~~~~~~v~~~~~sp~~~-~l~~~~  339 (343)
                      +....++..++++||++ +|++.+
T Consensus       327 i~vg~~~~~lavs~D~~~~ly~tn  350 (386)
T 3sjl_D          327 FEMGHEIDSINVSQDEKPLLYALS  350 (386)
T ss_dssp             EEEEEEECEEEECSSSSCEEEEEE
T ss_pred             EECCCCcceEEECCCCCeEEEEEc
Confidence            98666899999999997 677654

>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B

Probab=99.71  E-value=6.2e-14  Score=112.46  Aligned_cols=216  Identities=11%  Similarity=0.122  Sum_probs=149.6

Q ss_pred             eEEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceeccc----CCcce
Q psy10867          6 EVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLI----CPGRI   81 (343)
Q Consensus         6 ~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~----~~~~v   81 (343)
                      .+.++...++.|..||..+++. ..+.. .. .+.+++++|+|.++++. . +.|.+||.++++.......    ....+
T Consensus        26 ~l~~~d~~~~~i~~~d~~~~~~-~~~~~-~~-~~~~i~~~~dG~l~v~~-~-~~l~~~d~~~g~~~~~~~~~~~~~~~~~  100 (297)
T 3g4e_A           26 SLLFVDIPAKKVCRWDSFTKQV-QRVTM-DA-PVSSVALRQSGGYVATI-G-TKFCALNWKEQSAVVLATVDNDKKNNRF  100 (297)
T ss_dssp             EEEEEETTTTEEEEEETTTCCE-EEEEC-SS-CEEEEEEBTTSSEEEEE-T-TEEEEEETTTTEEEEEEECCTTCSSEEE
T ss_pred             EEEEEECCCCEEEEEECCCCcE-EEEeC-CC-ceEEEEECCCCCEEEEE-C-CeEEEEECCCCcEEEEEecCCCCCCCCC
Confidence            4555555678999999887765 33433 34 78999999999977765 4 6899999987765432221    23458


Q ss_pred             EEEEECCCCCEEEEec----------CCeEEEEEccC-CceEEEecccCCCeEEEEEecCCCEE-EEecCCCeEEEeecC
Q psy10867         82 SSMQASPDAAYIAVSI----------ETKLHMWQISS-GRLLATASSHYQPITIVKWSADSNFI-VTGGEDGTICVWQLS  149 (343)
Q Consensus        82 ~~~~~s~~~~~l~~~~----------d~~i~v~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l-~s~~~dg~i~iwd~~  149 (343)
                      +.+++.|+|+++++..          ...-.+|.+.. ++.. .+..+......++|+|+++.| ++.+.++.|.+|++.
T Consensus       101 ~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~-~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d  179 (297)
T 3g4e_A          101 NDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVK-KYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYD  179 (297)
T ss_dssp             EEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEE-EEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEEC
T ss_pred             CCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEE-EEeeccccccceEEcCCCCEEEEecCCCCcEEEEecc
Confidence            8999999999888642          12344555443 3333 333344456899999999866 455667899999874


Q ss_pred             --ccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecC-
Q psy10867        150 --RLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILD-  226 (343)
Q Consensus       150 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~-  226 (343)
                        ++.....                 +....+..+...+..+++++++  ++.++....+.|..||..+++.+..+..+ 
T Consensus       180 ~~~G~~~~~-----------------~~~~~~~~~~~~p~g~~~d~~G--~lwva~~~~~~v~~~d~~tG~~~~~i~~p~  240 (297)
T 3g4e_A          180 LQTGQISNR-----------------RSVYKLEKEEQIPDGMCIDAEG--KLWVACYNGGRVIRLDPVTGKRLQTVKLPV  240 (297)
T ss_dssp             TTTCCEEEE-----------------EEEEECCGGGCEEEEEEEBTTS--CEEEEEETTTEEEEECTTTCCEEEEEECSS
T ss_pred             CCCCcccCc-----------------EEEEECCCCCCCCCeeEECCCC--CEEEEEcCCCEEEEEcCCCceEEEEEECCC
Confidence              3322110                 1222233344567899999998  77777777889999999889998888855 


Q ss_pred             CcEEEEEEc-CCCCEEEEEcC
Q psy10867        227 TRLTCVAFD-GTEDNIYMGTS  246 (343)
Q Consensus       227 ~~i~~~~~~-~~~~~l~~~~~  246 (343)
                      ..+++++|. |+++.|++.+.
T Consensus       241 ~~~t~~~f~g~d~~~L~vt~~  261 (297)
T 3g4e_A          241 DKTTSCCFGGKNYSEMYVTCA  261 (297)
T ss_dssp             SBEEEEEEESGGGCEEEEEEB
T ss_pred             CCceEEEEeCCCCCEEEEEcC
Confidence            679999998 88888877654

>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}

Probab=99.71  E-value=7.5e-15  Score=132.67  Aligned_cols=239  Identities=8%  Similarity=-0.004  Sum_probs=154.5

Q ss_pred             cceEEEEeCCceEEEEEcCC-----CeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-ecCC------------
Q psy10867         38 SPHSMCLLGNDYVLGVEKGK-----PMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SIET------------   99 (343)
Q Consensus        38 ~v~~~~~~~~~~~~~~~~~~-----~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~------------   99 (343)
                      .+..++|||||+.++.+.++     ..|++||+.+++.+... .+...+..++|+|| +.|+. ..++            
T Consensus       164 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~-~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~  241 (741)
T 1yr2_A          164 ALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADE-LKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNY  241 (741)
T ss_dssp             EEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEE-EEEEESCCCEESTT-SEEEEEECCCC--------CCC
T ss_pred             EEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCcc-CCCceeccEEEECC-CEEEEEEecCcccccccccCCC
Confidence            67889999999877765542     36999999998875432 12222357899999 87775 4332            


Q ss_pred             --eEEEEEccCCce--EEEec--ccCCCeEEEEEecCCCEEEEecCCC-----eEEEeecCccceeeeeecCCCCCCCCc
Q psy10867        100 --KLHMWQISSGRL--LATAS--SHYQPITIVKWSADSNFIVTGGEDG-----TICVWQLSRLICKQTVAFGIPGSSGKG  168 (343)
Q Consensus       100 --~i~v~~~~~~~~--~~~~~--~~~~~v~~~~~~~~~~~l~s~~~dg-----~i~iwd~~~~~~~~~~~~~~~~~~~~~  168 (343)
                        .|++|++.++..  ...+.  .+...+..+.|+|||++|+..+.++     .|.+||+.++...              
T Consensus       242 ~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~--------------  307 (741)
T 1yr2_A          242 NQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIG--------------  307 (741)
T ss_dssp             CCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEEC--------------
T ss_pred             CCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCc--------------
Confidence              499999977652  22333  3334588999999999888776543     8999998765210              


Q ss_pred             cccccceeeeecccccceEEEEeecCCCceEEEEeeC----CCeEEEEecCCCc-eEEE-ee-cCCcEEEEEEcCCCCEE
Q psy10867        169 VTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSH----DRTCKIFDLCTGE-DLLS-LI-LDTRLTCVAFDGTEDNI  241 (343)
Q Consensus       169 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~----d~~i~~wd~~~~~-~~~~-~~-~~~~i~~~~~~~~~~~l  241 (343)
                            ....+..+...+... ++|++  ..|+..+.    ++.|.+||+.++. .... +. ....+..+.++ ++.++
T Consensus       308 ------~~~~l~~~~~~~~~~-~~~dg--~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv  377 (741)
T 1yr2_A          308 ------PVTALIPDLKAQWDF-VDGVG--DQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLF  377 (741)
T ss_dssp             ------CCEEEECSSSSCEEE-EEEET--TEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEE
T ss_pred             ------ccEEecCCCCceEEE-EeccC--CEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEE
Confidence                  012222333344444 34777  55655554    4569999998752 3233 33 33446677887 56677


Q ss_pred             EEEcCCCcEEEEEeecccccccccccCCCCCCcccc-ccCcEEEEEEccCCCEEEE----EeCCCcEEEEecccce
Q psy10867        242 YMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIG-HEKQVTSLSCSITGITLLS----SSADETLKIWHTISRQ  312 (343)
Q Consensus       242 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s----~~~dg~i~iwd~~~~~  312 (343)
                      ++...++..++|.+......          ...+.. +...+..+.++|+++.|+.    ....+.|++||+.+++
T Consensus       378 ~~~~~dg~~~l~~~~~~g~~----------~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~  443 (741)
T 1yr2_A          378 ASYIHDAKSQVLAFDLDGKP----------AGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAK  443 (741)
T ss_dssp             EEEEETTEEEEEEEETTSCE----------EEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred             EEEEECCEEEEEEEeCCCCc----------eeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence            77888998888876521110          112222 3567888999999886652    2334789999998776

>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}

Probab=99.71  E-value=9.4e-15  Score=119.70  Aligned_cols=262  Identities=10%  Similarity=0.068  Sum_probs=168.2

Q ss_pred             cceEEEEeCCceEEEEEc--CCCeEEEEeCCCccccee------cccCCcceEEEEECCCCCEEEEe-c-----CCeEEE
Q psy10867         38 SPHSMCLLGNDYVLGVEK--GKPMIQAWPVNSQEKAQL------RLICPGRISSMQASPDAAYIAVS-I-----ETKLHM  103 (343)
Q Consensus        38 ~v~~~~~~~~~~~~~~~~--~~~~i~iw~~~~~~~~~~------~~~~~~~v~~~~~s~~~~~l~~~-~-----d~~i~v  103 (343)
                      .+..++++|+|+++++..  .++.++||.+.+++....      ...+...+..+++.++++++++. .     ++.|.+
T Consensus        18 ~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~   97 (343)
T 2qe8_A           18 APGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVA   97 (343)
T ss_dssp             CEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEE
T ss_pred             CcceEEECCCCCEEEEeCCCCCCceEEEEECCCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEE
Confidence            789999999999888853  224355555544443211      11244679999999999877763 2     579999


Q ss_pred             EEccCCceEEEeccc------CCCeEEEEEecCCCE-EEEec---CCCeEEEeecCccceeeeeecCCCCCCCCcccccc
Q psy10867        104 WQISSGRLLATASSH------YQPITIVKWSADSNF-IVTGG---EDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLT  173 (343)
Q Consensus       104 ~~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~-l~s~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (343)
                      ||+.+++.+..+...      ...+..+++++++.. +++-.   .++.|.+||+.+++...                  
T Consensus        98 ~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r------------------  159 (343)
T 2qe8_A           98 WDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAAR------------------  159 (343)
T ss_dssp             EETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEE------------------
T ss_pred             EECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEE------------------
Confidence            999999877665422      235689999986544 45544   57899999998764322                  


Q ss_pred             ceeeeecccccceE-EEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcCCC-cEE
Q psy10867        174 EPLHVKSQHSLPVT-HVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEG-VIK  251 (343)
Q Consensus       174 ~~~~~~~~~~~~v~-~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~-~i~  251 (343)
                          .+.+|..... ...+.+++  ..+.+.+.++.++.|.             ..+..++|+|+++.|+++...+ .++
T Consensus       160 ----~~~~~~~~~~~~~~~~~~g--~~~~~~~~~g~~~~~~-------------~~~~gia~s~dg~~ly~~~~~~~~l~  220 (343)
T 2qe8_A          160 ----VLQGYPGIAPEDIDLVIDG--VPVQIGQPDGTVIRPH-------------LGVNGIVLDAENEWLYLSPMHSTSMY  220 (343)
T ss_dssp             ----ECTTCTTTSCCSCCCEETT--EECBEECTTSCEECCC-------------CCEEEEEECTTSCEEEEEESSCSEEE
T ss_pred             ----EecCCCcccccccceeECC--EEEEeccCCCceecee-------------cccceeEeccCCCEEEEEeCCCCeEE
Confidence                2222211100 13344566  5666677777776653             2367899999999998887665 454


Q ss_pred             EEEeecccccc--cccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc--cCCceEEEE
Q psy10867        252 SFCLRQVPRTR--DHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ--HKGPVLGAF  327 (343)
Q Consensus       252 i~d~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~--~~~~v~~~~  327 (343)
                      .++........  ....  .. .....++......++++++|+++++...++.|.+||..+++......  ....+.+++
T Consensus       221 ~~~~~~~~~~~~~~~~~--~~-~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va  297 (343)
T 2qe8_A          221 RIKSADLSNLQLTDAEL--GS-KIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFN  297 (343)
T ss_dssp             EEEHHHHTCTTCCHHHH--HT-TCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEE
T ss_pred             EEEHHHhcCCCCChhhh--hc-ceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeE
Confidence            44433211100  0000  00 00112344456779999999999999999999999985666433333  245689999


Q ss_pred             EccCCCeeeecc
Q psy10867        328 LGLLPPAIHDYD  339 (343)
Q Consensus       328 ~sp~~~~l~~~~  339 (343)
                      |.++++++++.+
T Consensus       298 ~~~~g~l~v~~~  309 (343)
T 2qe8_A          298 FGSDGYLYFDCN  309 (343)
T ss_dssp             ECTTSCEEEEEC
T ss_pred             ECCCCcEEEEeC
Confidence            999998777654

>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1

Probab=99.70  E-value=4e-15  Score=121.45  Aligned_cols=269  Identities=10%  Similarity=-0.031  Sum_probs=177.9

Q ss_pred             eEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEc----------CCCeEEEEeCCCcccceecccC-------C
Q psy10867         16 AISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEK----------GKPMIQAWPVNSQEKAQLRLIC-------P   78 (343)
Q Consensus        16 ~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~----------~~~~i~iw~~~~~~~~~~~~~~-------~   78 (343)
                      .|.+.|..+++.+.++..... +  .+.++||++.+..+.          .++.|.+||..+++.+..+...       .
T Consensus        47 ~vsvID~~t~~v~~~i~vG~~-P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g  123 (368)
T 1mda_H           47 ENWVSCAGCGVTLGHSLGAFL-S--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVG  123 (368)
T ss_dssp             EEEEEETTTTEEEEEEEECTT-C--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBS
T ss_pred             eEEEEECCCCeEEEEEeCCCC-C--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccC
Confidence            888999999999999987775 5  799999997666664          3578999999999988665422       1


Q ss_pred             cceEEEEECCCCCEEEEec---CCeEEE--EEccCCceEEEecccCCCeEEEEEecCCC-EEEEecCCCeEEEeecCc--
Q psy10867         79 GRISSMQASPDAAYIAVSI---ETKLHM--WQISSGRLLATASSHYQPITIVKWSADSN-FIVTGGEDGTICVWQLSR--  150 (343)
Q Consensus        79 ~~v~~~~~s~~~~~l~~~~---d~~i~v--~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~dg~i~iwd~~~--  150 (343)
                      .....++++|||++++++.   ++.+.+  +|+.+   +..+... +.   ..+.|+++ .+++.+.||.+.+.|+.+  
T Consensus       124 ~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~-~~---~~~~p~g~~~~~~~~~dg~~~~vd~~~~~  196 (368)
T 1mda_H          124 PRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSA-SC---FHIHPGAAATHYLGSCPASLAASDLAAAP  196 (368)
T ss_dssp             CCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECS-SC---CCCEEEETTEEECCCCTTSCEEEECCSSC
T ss_pred             CCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECC-Cc---eEEccCCCeEEEEEcCCCCEEEEECcccc
Confidence            2356899999999888742   467888  99877   4444321 11   22345443 455666788888888876  


Q ss_pred             ---cceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCc--eEEEeec
Q psy10867        151 ---LICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGE--DLLSLIL  225 (343)
Q Consensus       151 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~--~~~~~~~  225 (343)
                         ++.....                 . ....-...+.   . .+++  ..++..+. +.+.+.|..+..  .+..+..
T Consensus       197 ~~~~~v~~~~-----------------t-~~i~vg~~P~---~-~~~~--~~~~~vs~-~~V~viD~~~~~~~v~~~~~~  251 (368)
T 1mda_H          197 AAAGIVGAQC-----------------T-GAQNCSSQAA---Q-ANYP--GMLVWAVA-SSILQGDIPAAGATMKAAIDG  251 (368)
T ss_dssp             CCCEECCCCS-----------------C-TTSCBCSCCE---E-ETTT--TEEEECBS-SCCEEEECCSSCCEEECCCCS
T ss_pred             ccCCeEEEEe-----------------e-eeeeCCCCcc---c-cccC--CEEEEEcC-CEEEEEECCCCcceEEEEEEe
Confidence               2211100                 0 0000112222   2 5555  34444445 899999986543  2222211


Q ss_pred             -----------CCcEEEEEEcCCCCEEEEEcC-C--------CcEEEEEeecccccccccccCCCCCCccccccCcEEEE
Q psy10867        226 -----------DTRLTCVAFDGTEDNIYMGTS-E--------GVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSL  285 (343)
Q Consensus       226 -----------~~~i~~~~~~~~~~~l~~~~~-d--------~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  285 (343)
                                 +.....++++|+++.++++.. .        +.+.++|+.+.+....           +... .....+
T Consensus       252 ~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~-----------i~vg-~~p~gi  319 (368)
T 1mda_H          252 NESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGP-----------ISNG-HDSDAI  319 (368)
T ss_dssp             SCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEEC-----------CEEE-EEECEE
T ss_pred             ccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEE-----------EECC-CCcceE
Confidence                       111222789999999987643 2        3566999988655332           3222 258899


Q ss_pred             EEccCCC-EEEEEe-CCCcEEEEecccceeeeecccCCceEEEEEccC
Q psy10867        286 SCSITGI-TLLSSS-ADETLKIWHTISRQCLRTIQHKGPVLGAFLGLL  331 (343)
Q Consensus       286 ~~s~~~~-~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~  331 (343)
                      +|+|||+ .+++.. .++.|.++|+.+++.+.++........+++.+.
T Consensus       320 ~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg~~P~~i~~~~~  367 (368)
T 1mda_H          320 IAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDKGPESLSVQNE  367 (368)
T ss_dssp             EECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCCSCCCEEECCCC
T ss_pred             EECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEECCCCCCEEEeecC
Confidence            9999998 455666 589999999999999999986666677777653

>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}

Probab=99.70  E-value=1.5e-14  Score=128.85  Aligned_cols=306  Identities=10%  Similarity=0.045  Sum_probs=192.8

Q ss_pred             ceEEEecCCCCeEEEEecCCceEEEEEecCCCCc----------ceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceec
Q psy10867          5 NEVAFSYDGSGAISVWEPKGGTLLMSYKGASVLS----------PHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLR   74 (343)
Q Consensus         5 ~~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~----------v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~   74 (343)
                      ...+|..+.++.|..+|..+|+.+.++.......          -..+++. ++++++ +..|+.|..+|..+++.+...
T Consensus        70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~v~v-~~~dg~l~AlDa~TG~~~W~~  147 (689)
T 1yiq_A           70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVW-KGKVYV-GVLDGRLEAIDAKTGQRAWSV  147 (689)
T ss_dssp             TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEE-TTEEEE-ECTTSEEEEEETTTCCEEEEE
T ss_pred             CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEE-CCEEEE-EccCCEEEEEECCCCCEeeee
Confidence            4566777778999999999999999987643201          0122332 445444 445599999999999887433


Q ss_pred             cc--CCcceEEEEECC---CCCEEEEe------cCCeEEEEEccCCceEEEecccC------------------------
Q psy10867         75 LI--CPGRISSMQASP---DAAYIAVS------IETKLHMWQISSGRLLATASSHY------------------------  119 (343)
Q Consensus        75 ~~--~~~~v~~~~~s~---~~~~l~~~------~d~~i~v~~~~~~~~~~~~~~~~------------------------  119 (343)
                      ..  +......+..+|   ++.+++.+      .++.|+.||..+|+.+..+....                        
T Consensus       148 ~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w  227 (689)
T 1yiq_A          148 DTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAY  227 (689)
T ss_dssp             ECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTH
T ss_pred             cCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCcee
Confidence            22  111111112222   56555543      26899999999999887664210                        


Q ss_pred             -------CCeEEEEEecCCCEEEEecCCCe-------------------EEEeecCccceeeeeecCCCCCCCCcccccc
Q psy10867        120 -------QPITIVKWSADSNFIVTGGEDGT-------------------ICVWQLSRLICKQTVAFGIPGSSGKGVTGLT  173 (343)
Q Consensus       120 -------~~v~~~~~~~~~~~l~s~~~dg~-------------------i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (343)
                             .....+++.|+...++.++.++.                   |..+|..+++....++......         
T Consensus       228 ~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~---------  298 (689)
T 1yiq_A          228 VEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDA---------  298 (689)
T ss_dssp             HHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCC---------
T ss_pred             eecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCccc---------
Confidence                   01125788888889999888764                   9999999998777654210000         


Q ss_pred             ceeeeecccccceEEEEeecCCC-ceEEEEeeCCCeEEEEecCCCceEEEeecCC--c----------------------
Q psy10867        174 EPLHVKSQHSLPVTHVTLSKLGA-KSRVASVSHDRTCKIFDLCTGEDLLSLILDT--R----------------------  228 (343)
Q Consensus       174 ~~~~~~~~~~~~v~~~~~~~~~~-~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~--~----------------------  228 (343)
                         ..+ ....++.......++. ...++.++.+|.++++|.++|+.+.......  .                      
T Consensus       299 ---wd~-~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~  374 (689)
T 1yiq_A          299 ---WDY-TATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWK  374 (689)
T ss_dssp             ---SCC-CCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTT
T ss_pred             ---ccc-cCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccC
Confidence               000 0111122222223441 1378899999999999999999885543211  0                      


Q ss_pred             ----------------EEEEEEcCCCCEEEEEcC---------------------------------------------C
Q psy10867        229 ----------------LTCVAFDGTEDNIYMGTS---------------------------------------------E  247 (343)
Q Consensus       229 ----------------i~~~~~~~~~~~l~~~~~---------------------------------------------d  247 (343)
                                      -..++|+|+..++++...                                             +
T Consensus       375 ~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~  454 (689)
T 1yiq_A          375 NGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWS  454 (689)
T ss_dssp             SSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCE
T ss_pred             CCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcc
Confidence                            112688998888887643                                             2


Q ss_pred             CcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecccC--CceEE
Q psy10867        248 GVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQHK--GPVLG  325 (343)
Q Consensus       248 ~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~--~~v~~  325 (343)
                      |.|+.||+.+.+.....           ..+ .+...-.+...+.+++.++.||.|+.||.++|+.+.+++..  ....-
T Consensus       455 g~l~A~D~~tG~~~W~~-----------~~~-~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p  522 (689)
T 1yiq_A          455 GKLIAWDPVKQQAAWEV-----------PYV-TIFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAP  522 (689)
T ss_dssp             EEEEEEETTTTEEEEEE-----------EES-SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCC
T ss_pred             eeEEEEECCCCCeEeEc-----------cCC-CCccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCc
Confidence            66777777765543322           111 22222345567789999999999999999999999998822  22244


Q ss_pred             EEEccCCCeeee
Q psy10867        326 AFLGLLPPAIHD  337 (343)
Q Consensus       326 ~~~sp~~~~l~~  337 (343)
                      +.|..+|+..++
T Consensus       523 ~ty~~~G~qyv~  534 (689)
T 1yiq_A          523 VTYSVDGEQYVT  534 (689)
T ss_dssp             EEEEETTEEEEE
T ss_pred             eEEEECCEEEEE
Confidence            677888875543

>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}

Probab=99.69  E-value=4.9e-15  Score=122.85  Aligned_cols=253  Identities=8%  Similarity=-0.077  Sum_probs=170.8

Q ss_pred             CeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEEe-----------cCCeEEEEEccCCceEEEeccc-------C
Q psy10867         58 PMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVS-----------IETKLHMWQISSGRLLATASSH-------Y  119 (343)
Q Consensus        58 ~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-----------~d~~i~v~~~~~~~~~~~~~~~-------~  119 (343)
                      +.|.++|..+.+.+..+.....+  .++++||+++|.++           .++.|.++|..+++.+..+.-.       .
T Consensus        99 ~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g  176 (426)
T 3c75_H           99 TQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVG  176 (426)
T ss_dssp             EEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBS
T ss_pred             CeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccC
Confidence            69999999999988666544445  89999999977763           2568999999999988776421       1


Q ss_pred             CCeEEEEEecCCCEEEEecC--CCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCc
Q psy10867        120 QPITIVKWSADSNFIVTGGE--DGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAK  197 (343)
Q Consensus       120 ~~v~~~~~~~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  197 (343)
                      .....+.|+||+++++.+..  ++.|.+.|+.+.+...++..+                       .   +....|++. 
T Consensus       177 ~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~-----------------------g---~~~~~p~g~-  229 (426)
T 3c75_H          177 TYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVP-----------------------D---CYHIFPASP-  229 (426)
T ss_dssp             CCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECC-----------------------S---EEEEEEEET-
T ss_pred             CCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcC-----------------------C---ceeeccCCC-
Confidence            23467899999999998864  578999999998766554310                       0   123344443 


Q ss_pred             eEEEEeeCCCeEEEEecCCCceEEE----eec-CCc-EEEEEEcCCCCEEEEEcCCCcEEEEEeecccccc--cccccCC
Q psy10867        198 SRVASVSHDRTCKIFDLCTGEDLLS----LIL-DTR-LTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTR--DHHIQDS  269 (343)
Q Consensus       198 ~~l~~~~~d~~i~~wd~~~~~~~~~----~~~-~~~-i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~--~~~~~~~  269 (343)
                      ..+++.+.||.+.+.+..+++....    +.. ..+ ...+.+.+++..++.....+.+.+.|+.......  .+.....
T Consensus       230 ~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~  309 (426)
T 3c75_H          230 TVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTE  309 (426)
T ss_dssp             TEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCT
T ss_pred             cEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccc
Confidence            4556666778877777765555432    111 111 1235679999988888888999999986532111  0000000


Q ss_pred             CCCCccccccCcEEEEEEccCCCEEEEEeC----------CCcEEEEecccceeeeecccCCceEEEEEccCCC-eeeec
Q psy10867        270 TSNPDFIGHEKQVTSLSCSITGITLLSSSA----------DETLKIWHTISRQCLRTIQHKGPVLGAFLGLLPP-AIHDY  338 (343)
Q Consensus       270 ~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~----------dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~-~l~~~  338 (343)
                      ..+ ...........++++|+++.++....          ++.|.+.|+.+++.+.++........++|+|||+ +++++
T Consensus       310 ~~i-~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~~P~gia~spDg~~~lyv~  388 (426)
T 3c75_H          310 AER-ADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGHEIDSINVSQDAEPLLYAL  388 (426)
T ss_dssp             TTG-GGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECCSSSCEEEEE
T ss_pred             ccc-ccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCCCcCeEEEccCCCEEEEEE
Confidence            000 00001112223689999887766542          3579999999999999998555789999999999 88877


Q ss_pred             cc
Q psy10867        339 DF  340 (343)
Q Consensus       339 ~~  340 (343)
                      .+
T Consensus       389 n~  390 (426)
T 3c75_H          389 SA  390 (426)
T ss_dssp             ET
T ss_pred             cC
Confidence            64

>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}

Probab=99.68  E-value=1.4e-13  Score=115.14  Aligned_cols=235  Identities=8%  Similarity=-0.008  Sum_probs=153.1

Q ss_pred             EEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCC--eEEEEeCCCcccceec----ccCCcc
Q psy10867          7 VAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKP--MIQAWPVNSQEKAQLR----LICPGR   80 (343)
Q Consensus         7 ~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~--~i~iw~~~~~~~~~~~----~~~~~~   80 (343)
                      +.++...++.|++||..+++.........  ... ++|+|++..+..+..++  .|.+++...+.....+    ......
T Consensus       144 lyv~d~~~~~I~~id~~~g~~~~~~~~~~--~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~  220 (409)
T 3hrp_A          144 VLAYQRDDPRVRLISVDDNKVTTVHPGFK--GGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGK  220 (409)
T ss_dssp             EEEEETTTTEEEEEETTTTEEEEEEETCC--BCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSC
T ss_pred             EEEEecCCCcEEEEECCCCEEEEeeccCC--CCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCC
Confidence            44444446899999998777766555533  445 99999998777666544  7888887765443222    224566


Q ss_pred             eEEEEECC-CCCEEEEecCCeEEEEEccCCceEEE----ecccCCCe--EEEEEecC-CCEEEEecCCCeEEEeecCccc
Q psy10867         81 ISSMQASP-DAAYIAVSIETKLHMWQISSGRLLAT----ASSHYQPI--TIVKWSAD-SNFIVTGGEDGTICVWQLSRLI  152 (343)
Q Consensus        81 v~~~~~s~-~~~~l~~~~d~~i~v~~~~~~~~~~~----~~~~~~~v--~~~~~~~~-~~~l~s~~~dg~i~iwd~~~~~  152 (343)
                      +.+++++| ++.++++..++.|+.||..++.....    ..++...-  ..++|+|+ +.++++-..++.|+.|+.....
T Consensus       221 p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~~  300 (409)
T 3hrp_A          221 IGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGEC  300 (409)
T ss_dssp             CCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCCE
T ss_pred             cEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCCE
Confidence            78899999 56666655678999999987764332    22222222  38999994 6666666778899999986531


Q ss_pred             eeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEee-CCCeEEEEecCCCceEEEeec------
Q psy10867        153 CKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVS-HDRTCKIFDLCTGEDLLSLIL------  225 (343)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~-~d~~i~~wd~~~~~~~~~~~~------  225 (343)
                        ..+. +.....+     ...- ......-.....++++|++  .++++-+ .++.|+.||+.+++.......      
T Consensus       301 --~~~~-g~~~~~g-----~~dg-~~~~~~~~~P~gia~d~dG--~lyvad~~~~~~I~~~~~~~G~v~~~~g~~~~~g~  369 (409)
T 3hrp_A          301 --EWFC-GSATQKT-----VQDG-LREEALFAQPNGMTVDEDG--NFYIVDGFKGYCLRKLDILDGYVSTVAGQVDVASQ  369 (409)
T ss_dssp             --EEEE-ECTTCCS-----CBCE-EGGGCBCSSEEEEEECTTC--CEEEEETTTTCEEEEEETTTTEEEEEEECTTCBSC
T ss_pred             --EEEE-eCCCCCC-----cCCC-cccccEeCCCeEEEEeCCC--CEEEEeCCCCCEEEEEECCCCEEEEEeCCCCCCCc
Confidence              1111 0000000     0000 0001112457899999998  7777777 889999999877765433322      


Q ss_pred             ---------CCcEEEEEEcCCCCEEEEEcCCCcEEEEEe
Q psy10867        226 ---------DTRLTCVAFDGTEDNIYMGTSEGVIKSFCL  255 (343)
Q Consensus       226 ---------~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~  255 (343)
                               -.....+++++++.++++-..++.|+.+++
T Consensus       370 ~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~  408 (409)
T 3hrp_A          370 IDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV  408 (409)
T ss_dssp             CCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred             CCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence                     135889999999877777778888888765

>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}

Probab=99.68  E-value=5.5e-14  Score=113.26  Aligned_cols=230  Identities=9%  Similarity=-0.019  Sum_probs=154.7

Q ss_pred             cccCCcceEEEEECCCCC-EEEEe-cCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCcc
Q psy10867         74 RLICPGRISSMQASPDAA-YIAVS-IETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRL  151 (343)
Q Consensus        74 ~~~~~~~v~~~~~s~~~~-~l~~~-~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~  151 (343)
                      +...........|+|+++ +++++ .++.|..|+. +++ ...+..+...+..++++++++++++...++.|.+|+.. +
T Consensus        40 l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g  116 (305)
T 3dr2_A           40 LYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-G  116 (305)
T ss_dssp             EECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred             EecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-C
Confidence            334455677899999998 44453 5789999997 454 34555566778999999999977776667889999986 3


Q ss_pred             ceeeeeecCCCCCCCCccccccceeeeecc-cccceEEEEeecCCCceEEEE----eeC-------------CCeEEEEe
Q psy10867        152 ICKQTVAFGIPGSSGKGVTGLTEPLHVKSQ-HSLPVTHVTLSKLGAKSRVAS----VSH-------------DRTCKIFD  213 (343)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~l~~----~~~-------------d~~i~~wd  213 (343)
                      .... +                  .....+ ....+..+++.|++  .++++    |..             .+.|..||
T Consensus       117 ~~~~-~------------------~~~~~~~~~~~~~~i~~d~dG--~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d  175 (305)
T 3dr2_A          117 QAHL-L------------------VGRYAGKRLNSPNDLIVARDG--AIWFTDPPFGLRKPSQGCPADPELAHHSVYRLP  175 (305)
T ss_dssp             CEEE-E------------------ECEETTEECSCCCCEEECTTS--CEEEECCSGGGSCGGGSCCCCCSSSCEEEEEEC
T ss_pred             CEEE-E------------------EeccCCCccCCCCCEEECCCC--CEEEeCcCCCccccccccccccccCCCeEEEEc
Confidence            2211 1                  001111 12346789999998  67775    332             35688888


Q ss_pred             cCCCceEEEeecCCcEEEEEEcCCCCEEEEEcCC------CcEEEEEeecccccccccccCCCCCCccccccCcEEEEEE
Q psy10867        214 LCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSE------GVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSC  287 (343)
Q Consensus       214 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d------~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  287 (343)
                      ..+++..... .......++|+|+++.|+++...      +.|++|++.... ......     ..  ......+..+++
T Consensus       176 ~~~g~~~~~~-~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~-----~~--~~~~~~pdgi~~  246 (305)
T 3dr2_A          176 PDGSPLQRMA-DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRH-----FA--SVPDGLPDGFCV  246 (305)
T ss_dssp             SSSCCCEEEE-EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE-EEEEEE-----EE--CCSSSCCCSEEE
T ss_pred             CCCCcEEEEe-cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC-ccCCeE-----EE--ECCCCCCCeEEE
Confidence            7777655443 44457889999999988887665      789999987532 110000     00  011234557899


Q ss_pred             ccCCCEEEEEeCCCcEEEEecccceeeeecccCCceEEEEEccCCCeeeecc
Q psy10867        288 SITGITLLSSSADETLKIWHTISRQCLRTIQHKGPVLGAFLGLLPPAIHDYD  339 (343)
Q Consensus       288 s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~  339 (343)
                      +++|++.++ +.+ .|.+|+. +++.+..+.....+.+++|+|+++.|+.++
T Consensus       247 d~~G~lwv~-~~~-gv~~~~~-~g~~~~~~~~~~~~~~~~f~~d~~~L~it~  295 (305)
T 3dr2_A          247 DRGGWLWSS-SGT-GVCVFDS-DGQLLGHIPTPGTASNCTFDQAQQRLFITG  295 (305)
T ss_dssp             CTTSCEEEC-CSS-EEEEECT-TSCEEEEEECSSCCCEEEECTTSCEEEEEE
T ss_pred             CCCCCEEEe-cCC-cEEEECC-CCCEEEEEECCCceeEEEEeCCCCEEEEEc
Confidence            999995544 455 4999997 677777777444689999999998887654

>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1

Probab=99.67  E-value=1.8e-14  Score=127.99  Aligned_cols=306  Identities=9%  Similarity=0.041  Sum_probs=195.4

Q ss_pred             ceEEEecCCCCeEEEEecCCceEEEEEecCCCC----------cceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceec
Q psy10867          5 NEVAFSYDGSGAISVWEPKGGTLLMSYKGASVL----------SPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLR   74 (343)
Q Consensus         5 ~~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~----------~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~   74 (343)
                      ...+|..+.++.|..+|..+|+.+.+++.....          ....+++. ++++++ +..++.|..+|..+++.+..+
T Consensus        77 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~-~~~v~v-~~~dg~l~alD~~tG~~~W~~  154 (677)
T 1kb0_A           77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALW-KGKVYV-GAWDGRLIALDAATGKEVWHQ  154 (677)
T ss_dssp             TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEE-TTEEEE-ECTTSEEEEEETTTCCEEEEE
T ss_pred             CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEE-CCEEEE-EcCCCEEEEEECCCCCEEeee
Confidence            445677777899999999999999988765320          11233332 344444 455599999999999887444


Q ss_pred             ccC-C----cceEEEEECCCCCEEEEec------CCeEEEEEccCCceEEEecccCCC----------------------
Q psy10867         75 LIC-P----GRISSMQASPDAAYIAVSI------ETKLHMWQISSGRLLATASSHYQP----------------------  121 (343)
Q Consensus        75 ~~~-~----~~v~~~~~s~~~~~l~~~~------d~~i~v~~~~~~~~~~~~~~~~~~----------------------  121 (343)
                      ... .    ..+..--...++.+++.+.      ++.|+.+|..+|+.+..+......                      
T Consensus       155 ~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~  234 (677)
T 1kb0_A          155 NTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGK  234 (677)
T ss_dssp             ETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGC
T ss_pred             cCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCc
Confidence            332 1    1111100011455555432      689999999999988776532111                      


Q ss_pred             ----------eEEEEEecCCCEEEEecCCC-------------------eEEEeecCccceeeeeecCCCCCCCCccccc
Q psy10867        122 ----------ITIVKWSADSNFIVTGGEDG-------------------TICVWQLSRLICKQTVAFGIPGSSGKGVTGL  172 (343)
Q Consensus       122 ----------v~~~~~~~~~~~l~s~~~dg-------------------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~  172 (343)
                                ...++++|++..++.++.++                   .|..+|..+++....++.......       
T Consensus       235 ~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~w-------  307 (677)
T 1kb0_A          235 WWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNW-------  307 (677)
T ss_dssp             HHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCS-------
T ss_pred             eeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCccc-------
Confidence                      12578888888888887664                   499999999887776542110000       


Q ss_pred             cceeeeecccccceEEEEeecCCC-ceEEEEeeCCCeEEEEecCCCceEEEeecCC------------cE----------
Q psy10867        173 TEPLHVKSQHSLPVTHVTLSKLGA-KSRVASVSHDRTCKIFDLCTGEDLLSLILDT------------RL----------  229 (343)
Q Consensus       173 ~~~~~~~~~~~~~v~~~~~~~~~~-~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~------------~i----------  229 (343)
                           .... ......+....+|. ...++.++.+|.++++|.++|+.+..+....            ++          
T Consensus       308 -----d~~~-~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~  381 (677)
T 1kb0_A          308 -----DYTS-TQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSK  381 (677)
T ss_dssp             -----CCCC-CSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTS
T ss_pred             -----cccc-CCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCC
Confidence                 0000 11122223333441 1468889999999999999999987765221            01          


Q ss_pred             --------------EEEEEcCCCCEEEEEcCC-------------------------------------------CcEEE
Q psy10867        230 --------------TCVAFDGTEDNIYMGTSE-------------------------------------------GVIKS  252 (343)
Q Consensus       230 --------------~~~~~~~~~~~l~~~~~d-------------------------------------------~~i~i  252 (343)
                                    ..++++|+..++++...+                                           |.|..
T Consensus       382 ~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A  461 (677)
T 1kb0_A          382 PQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLA  461 (677)
T ss_dssp             CEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEE
T ss_pred             ccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEE
Confidence                          146889998888886432                                           67888


Q ss_pred             EEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecccC--CceEEEEEcc
Q psy10867        253 FCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQHK--GPVLGAFLGL  330 (343)
Q Consensus       253 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~--~~v~~~~~sp  330 (343)
                      ||+.+.+......            +..++....+..++.+++.++.||.+++||.++|+.+.++...  ....-+.|.+
T Consensus       462 ~D~~tG~~~W~~~------------~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~  529 (677)
T 1kb0_A          462 WDPVAQKAAWSVE------------HVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMV  529 (677)
T ss_dssp             EETTTTEEEEEEE------------ESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEE
T ss_pred             EeCCCCcEEeecC------------CCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCEEEEe
Confidence            8887765433221            2223344456677888889999999999999999999999822  2234466778


Q ss_pred             CCCeeee
Q psy10867        331 LPPAIHD  337 (343)
Q Consensus       331 ~~~~l~~  337 (343)
                      +|+..++
T Consensus       530 ~G~~~v~  536 (677)
T 1kb0_A          530 DGRQYVS  536 (677)
T ss_dssp             TTEEEEE
T ss_pred             CCEEEEE
Confidence            8875543

>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1

Probab=99.67  E-value=5.4e-13  Score=108.40  Aligned_cols=224  Identities=9%  Similarity=0.009  Sum_probs=149.1

Q ss_pred             eEEEEECCCCC-EEEEe-cCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeee
Q psy10867         81 ISSMQASPDAA-YIAVS-IETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVA  158 (343)
Q Consensus        81 v~~~~~s~~~~-~l~~~-~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~  158 (343)
                      .....|+|++. ++++. .++.|..||..+++.. .+. ....+.+++|+|+++++++. . ..|.+||..++...... 
T Consensus        51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~v~~i~~~~dg~l~v~~-~-~gl~~~d~~~g~~~~~~-  125 (326)
T 2ghs_A           51 GEGPTFDPASGTAWWFNILERELHELHLASGRKT-VHA-LPFMGSALAKISDSKQLIAS-D-DGLFLRDTATGVLTLHA-  125 (326)
T ss_dssp             EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEE-CSSCEEEEEEEETTEEEEEE-T-TEEEEEETTTCCEEEEE-
T ss_pred             CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEE-CCCcceEEEEeCCCeEEEEE-C-CCEEEEECCCCcEEEEe-
Confidence            46778999755 44453 5789999999877543 332 34679999999999877765 3 35999998776432111 


Q ss_pred             cCCCCCCCCccccccceeeeec--ccccceEEEEeecCCCceEEEEeeC------CCeEEEEecCCCceEEEeecCCcEE
Q psy10867        159 FGIPGSSGKGVTGLTEPLHVKS--QHSLPVTHVTLSKLGAKSRVASVSH------DRTCKIFDLCTGEDLLSLILDTRLT  230 (343)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~l~~~~~------d~~i~~wd~~~~~~~~~~~~~~~i~  230 (343)
                                         ...  .....+..++++|++  .++++...      .+.|..++  +++............
T Consensus       126 -------------------~~~~~~~~~~~~~i~~d~~G--~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~~~~~  182 (326)
T 2ghs_A          126 -------------------ELESDLPGNRSNDGRMHPSG--ALWIGTMGRKAETGAGSIYHVA--KGKVTKLFADISIPN  182 (326)
T ss_dssp             -------------------CSSTTCTTEEEEEEEECTTS--CEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEESSEE
T ss_pred             -------------------eCCCCCCCCCCCCEEECCCC--CEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCCcccC
Confidence                               000  112458899999998  55554432      25566666  454433223334577


Q ss_pred             EEEEcCCCCEEEEE-cCCCcEEEEEee--cc-cccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEE
Q psy10867        231 CVAFDGTEDNIYMG-TSEGVIKSFCLR--QV-PRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIW  306 (343)
Q Consensus       231 ~~~~~~~~~~l~~~-~~d~~i~i~d~~--~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw  306 (343)
                      .++|+|+++.++.+ +.++.|.+||+.  +. .....      .....+......+..++++++|+++++...++.|..|
T Consensus       183 ~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~------~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~  256 (326)
T 2ghs_A          183 SICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKA------EVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRY  256 (326)
T ss_dssp             EEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCC------EEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEE
T ss_pred             CeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCc------eEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEE
Confidence            89999999977665 557899999986  32 11000      0011122234557789999999888777777899999


Q ss_pred             ecccceeeeecc-cCCceEEEEEc-cCCCeeeecc
Q psy10867        307 HTISRQCLRTIQ-HKGPVLGAFLG-LLPPAIHDYD  339 (343)
Q Consensus       307 d~~~~~~~~~~~-~~~~v~~~~~s-p~~~~l~~~~  339 (343)
                      |. +++.+..+. +...+++++|+ |+++.|+.++
T Consensus       257 d~-~g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~  290 (326)
T 2ghs_A          257 DT-DGNHIARYEVPGKQTTCPAFIGPDASRLLVTS  290 (326)
T ss_dssp             CT-TCCEEEEEECSCSBEEEEEEESTTSCEEEEEE
T ss_pred             CC-CCCEEEEEECCCCCcEEEEEecCCCCEEEEEe
Confidence            98 677777777 55679999998 9988776554

>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1

Probab=99.66  E-value=2.9e-13  Score=110.02  Aligned_cols=220  Identities=12%  Similarity=-0.014  Sum_probs=147.4

Q ss_pred             cceEEEEeCC-ceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEEecCCeEEEEEccCCceEEEec
Q psy10867         38 SPHSMCLLGN-DYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATAS  116 (343)
Q Consensus        38 ~v~~~~~~~~-~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~  116 (343)
                      ...+.+|+|+ +.++.+...++.|..|+..+++....  .....+.+++|+|+|++++++. ..|.+||..+++......
T Consensus        50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~--~~~~~v~~i~~~~dg~l~v~~~-~gl~~~d~~~g~~~~~~~  126 (326)
T 2ghs_A           50 LGEGPTFDPASGTAWWFNILERELHELHLASGRKTVH--ALPFMGSALAKISDSKQLIASD-DGLFLRDTATGVLTLHAE  126 (326)
T ss_dssp             BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEEE--ECSSCEEEEEEEETTEEEEEET-TEEEEEETTTCCEEEEEC
T ss_pred             CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEEE--ECCCcceEEEEeCCCeEEEEEC-CCEEEEECCCCcEEEEee
Confidence            3467899996 67777777778999999988764332  2346799999999999888764 459999998887543322


Q ss_pred             c---c-CCCeEEEEEecCCCEEEEecC------CCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccce
Q psy10867        117 S---H-YQPITIVKWSADSNFIVTGGE------DGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPV  186 (343)
Q Consensus       117 ~---~-~~~v~~~~~~~~~~~l~s~~~------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  186 (343)
                      .   . ...+.+++++|+|+++++...      .+.|..++  +++.                       ..+..+....
T Consensus       127 ~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~-----------------------~~~~~~~~~~  181 (326)
T 2ghs_A          127 LESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKV-----------------------TKLFADISIP  181 (326)
T ss_dssp             SSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEE-----------------------EEEEEEESSE
T ss_pred             CCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcE-----------------------EEeeCCCccc
Confidence            1   1 235889999999997665432      24455555  3321                       1111223456


Q ss_pred             EEEEeecCCCceEE-EEeeCCCeEEEEecC--CC-ce-----EEEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEee
Q psy10867        187 THVTLSKLGAKSRV-ASVSHDRTCKIFDLC--TG-ED-----LLSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLR  256 (343)
Q Consensus       187 ~~~~~~~~~~~~~l-~~~~~d~~i~~wd~~--~~-~~-----~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~  256 (343)
                      ..++|+|++  +.+ ++.+.++.|.+||+.  ++ +.     ...+. ....+..++++++|++.++...++.|.+||..
T Consensus       182 ~~i~~s~dg--~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~  259 (326)
T 2ghs_A          182 NSICFSPDG--TTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTD  259 (326)
T ss_dssp             EEEEECTTS--CEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECTT
T ss_pred             CCeEEcCCC--CEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECCC
Confidence            789999998  544 555667899999986  55 32     11221 23457889999999877776667889999873


Q ss_pred             cccccccccccCCCCCCccccccCcEEEEEEc-cCCCEEEEEeC
Q psy10867        257 QVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCS-ITGITLLSSSA  299 (343)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s-~~~~~l~s~~~  299 (343)
                       ...           +..+..+...+++++|+ ++++.|+.++.
T Consensus       260 -g~~-----------~~~i~~~~~~~~~~af~g~d~~~L~vt~~  291 (326)
T 2ghs_A          260 -GNH-----------IARYEVPGKQTTCPAFIGPDASRLLVTSA  291 (326)
T ss_dssp             -CCE-----------EEEEECSCSBEEEEEEESTTSCEEEEEEB
T ss_pred             -CCE-----------EEEEECCCCCcEEEEEecCCCCEEEEEec
Confidence             222           22233445579999998 88876655443

>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*

Probab=99.65  E-value=1.2e-14  Score=118.96  Aligned_cols=182  Identities=12%  Similarity=0.040  Sum_probs=133.7

Q ss_pred             CeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEE
Q psy10867        121 PITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRV  200 (343)
Q Consensus       121 ~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l  200 (343)
                      ++..+++++...++++|+.++ +++|++........-.   .   ..     .++... ..+.. |+.++|  ++  .+|
T Consensus        39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~---~---~~-----~~~~~~-~~lp~-V~~l~f--d~--~~L  100 (388)
T 1xip_A           39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSD---S---TP-----LTFKWE-KEIPD-VIFVCF--HG--DQV  100 (388)
T ss_dssp             CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSS---S---CC-----CCCSEE-EECTT-EEEEEE--ET--TEE
T ss_pred             cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccc---c---cc-----ccceEE-eeCCC-eeEEEE--CC--CEE
Confidence            688999999999999999874 6669987653110000   0   00     012111 23555 999999  66  678


Q ss_pred             EEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCcccccc
Q psy10867        201 ASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHE  279 (343)
Q Consensus       201 ~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~  279 (343)
                      +++ .++.|++||+++........ +..++.++.+.+.  .+++++.||.|.+||+......               .+.
T Consensus       101 ~v~-~~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~---------------~~~  162 (388)
T 1xip_A          101 LVS-TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTK---------------QLA  162 (388)
T ss_dssp             EEE-ESSEEEEEESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEE---------------EEE
T ss_pred             EEE-cCCcEEEEEchhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCccc---------------ccc
Confidence            887 88999999998776554443 5667888777655  3888899999999999864321               145


Q ss_pred             CcEEEEEEccCCCEEEEEeCCCcEEEEeccccee--eeec------c----cCCceEEEEEccCCCeeeeccc
Q psy10867        280 KQVTSLSCSITGITLLSSSADETLKIWHTISRQC--LRTI------Q----HKGPVLGAFLGLLPPAIHDYDF  340 (343)
Q Consensus       280 ~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~--~~~~------~----~~~~v~~~~~sp~~~~l~~~~~  340 (343)
                      ..|++++|||+|  ++.|..||.+++|+...++.  ..++      .    |...|.++.|.+++++|++...
T Consensus       163 ~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y~~  233 (388)
T 1xip_A          163 QNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFGN  233 (388)
T ss_dssp             ESEEEEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEEEC
T ss_pred             CCceEEEEcCCc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEEcC
Confidence            689999999999  78899999999999887775  4555      2    5678999999999999987653

>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}

Probab=99.63  E-value=6.3e-13  Score=107.04  Aligned_cols=212  Identities=13%  Similarity=0.072  Sum_probs=146.8

Q ss_pred             EEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceeccc----CCcceE
Q psy10867          7 VAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLI----CPGRIS   82 (343)
Q Consensus         7 ~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~----~~~~v~   82 (343)
                      +.|+...++.|..|+. +++ ...+..+.. .+..++++++|+++++...++.|.+|+.+ ++.......    ....+.
T Consensus        59 l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~-~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~  134 (305)
T 3dr2_A           59 LVWSDLVGRRVLGWRE-DGT-VDVLLDATA-FTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPN  134 (305)
T ss_dssp             EEEEETTTTEEEEEET-TSC-EEEEEESCS-CEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECEETTEECSCCC
T ss_pred             EEEEECCCCEEEEEeC-CCC-EEEEeCCCC-ccceeeECCCCCEEEEECCCCEEEEECCC-CCEEEEEeccCCCccCCCC
Confidence            5666666789999987 554 345555566 78999999999988887766789999986 443322111    123467


Q ss_pred             EEEECCCCCEEEE----ec--------------CCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCC----
Q psy10867         83 SMQASPDAAYIAV----SI--------------ETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGED----  140 (343)
Q Consensus        83 ~~~~s~~~~~l~~----~~--------------d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d----  140 (343)
                      .+++.|+|+++++    +.              .+.|..+|..+++.....  .......++|+|+++.|+.+...    
T Consensus       135 ~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~spdg~~lyv~~~~~~~~  212 (305)
T 3dr2_A          135 DLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPNGLAFSPDEQTLYVSQTPEQGH  212 (305)
T ss_dssp             CEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEEEEEECTTSSEEEEEECCC---
T ss_pred             CEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCCCcceEEcCCCCEEEEEecCCcCC
Confidence            8999999998885    21              256888887777654433  34457889999999977776654    


Q ss_pred             --CeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCc
Q psy10867        141 --GTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGE  218 (343)
Q Consensus       141 --g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~  218 (343)
                        +.|.+|++.... ....                  .............+++++++  ++. ++..+ .|.+|+. .++
T Consensus       213 ~~~~i~~~~~~~~~-l~~~------------------~~~~~~~~~~pdgi~~d~~G--~lw-v~~~~-gv~~~~~-~g~  268 (305)
T 3dr2_A          213 GSVEITAFAWRDGA-LHDR------------------RHFASVPDGLPDGFCVDRGG--WLW-SSSGT-GVCVFDS-DGQ  268 (305)
T ss_dssp             CCCEEEEEEEETTE-EEEE------------------EEEECCSSSCCCSEEECTTS--CEE-ECCSS-EEEEECT-TSC
T ss_pred             CCCEEEEEEecCCC-ccCC------------------eEEEECCCCCCCeEEECCCC--CEE-EecCC-cEEEECC-CCC
Confidence              689999987543 1110                  00111123345678899998  544 44444 4999997 677


Q ss_pred             eEEEeecCCcEEEEEEcCCCCEEEEEcCCC
Q psy10867        219 DLLSLILDTRLTCVAFDGTEDNIYMGTSEG  248 (343)
Q Consensus       219 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~  248 (343)
                      .+..+..+..+.+++|.|+++.|++++.++
T Consensus       269 ~~~~~~~~~~~~~~~f~~d~~~L~it~~~~  298 (305)
T 3dr2_A          269 LLGHIPTPGTASNCTFDQAQQRLFITGGPC  298 (305)
T ss_dssp             EEEEEECSSCCCEEEECTTSCEEEEEETTE
T ss_pred             EEEEEECCCceeEEEEeCCCCEEEEEcCCe
Confidence            777777666789999999999998887654

>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A

Probab=99.62  E-value=1.1e-12  Score=108.90  Aligned_cols=279  Identities=12%  Similarity=0.090  Sum_probs=172.9

Q ss_pred             ceEEEecCCCCeEEEEecCCceEEEEEecCC--------CCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceeccc
Q psy10867          5 NEVAFSYDGSGAISVWEPKGGTLLMSYKGAS--------VLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLI   76 (343)
Q Consensus         5 ~~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~--------~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~   76 (343)
                      ...+|.++.++.|..+|..+|+.+..+....        ...+.+.-...++.+++... ++.|..+|..+++.......
T Consensus        53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~-~g~l~a~d~~tG~~~W~~~~  131 (376)
T 3q7m_A           53 DNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSE-KAQVYALNTSDGTVAWQTKV  131 (376)
T ss_dssp             TTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEET-TSEEEEEETTTCCEEEEEEC
T ss_pred             CCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcC-CCEEEEEECCCCCEEEEEeC
Confidence            3456777778999999999999988776632        10222222223556665554 48999999999887643332


Q ss_pred             CCcceEEEEECCCCCEEEEecCCeEEEEEccCCceEEEecccCCCe-----EEEEEecCCCEEEEecCCCeEEEeecCcc
Q psy10867         77 CPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPI-----TIVKWSADSNFIVTGGEDGTICVWQLSRL  151 (343)
Q Consensus        77 ~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~~~~~~v-----~~~~~~~~~~~l~s~~~dg~i~iwd~~~~  151 (343)
                      .......... .++.+++.+.++.|..+|..+|+.+..........     .....  .+..++.++.++.+..+|..++
T Consensus       132 ~~~~~~~p~~-~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~--~~~~v~~g~~~g~l~~~d~~tG  208 (376)
T 3q7m_A          132 AGEALSRPVV-SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTT--AFGAAVVGGDNGRVSAVLMEQG  208 (376)
T ss_dssp             SSCCCSCCEE-ETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEE--ETTEEEECCTTTEEEEEETTTC
T ss_pred             CCceEcCCEE-ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEE--ECCEEEEEcCCCEEEEEECCCC
Confidence            2211111112 25666666788999999999999887765432211     11222  2456788888999999999998


Q ss_pred             ceeeeeecCCCCCCCCccccccceeeee-cccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCCcEE
Q psy10867        152 ICKQTVAFGIPGSSGKGVTGLTEPLHVK-SQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLT  230 (343)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~  230 (343)
                      +.........+....        ....+ .....++    + .+   ..++.++.++.+..+|.++++.+....... ..
T Consensus       209 ~~~w~~~~~~~~~~~--------~~~~~~~~~~~p~----~-~~---~~v~~~~~~g~l~~~d~~tG~~~w~~~~~~-~~  271 (376)
T 3q7m_A          209 QMIWQQRISQATGST--------EIDRLSDVDTTPV----V-VN---GVVFALAYNGNLTALDLRSGQIMWKRELGS-VN  271 (376)
T ss_dssp             CEEEEEECCC-------------------CCCCCCE----E-ET---TEEEEECTTSCEEEEETTTCCEEEEECCCC-EE
T ss_pred             cEEEEEecccCCCCc--------ccccccccCCCcE----E-EC---CEEEEEecCcEEEEEECCCCcEEeeccCCC-CC
Confidence            776654321110000        00000 0001111    1 12   367777889999999999999887766433 33


Q ss_pred             EEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEeccc
Q psy10867        231 CVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTIS  310 (343)
Q Consensus       231 ~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~  310 (343)
                      .+..  ++..+++++.++.+..+|..+.+.......        .  ....+.....  .+..|+.++.+|.|..+|..+
T Consensus       272 ~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~--------~--~~~~~~~~~~--~~~~l~v~~~~g~l~~~d~~t  337 (376)
T 3q7m_A          272 DFIV--DGNRIYLVDQNDRVMALTIDGGVTLWTQSD--------L--LHRLLTSPVL--YNGNLVVGDSEGYLHWINVED  337 (376)
T ss_dssp             EEEE--ETTEEEEEETTCCEEEEETTTCCEEEEECT--------T--TTSCCCCCEE--ETTEEEEECTTSEEEEEETTT
T ss_pred             CceE--ECCEEEEEcCCCeEEEEECCCCcEEEeecc--------c--CCCcccCCEE--ECCEEEEEeCCCeEEEEECCC
Confidence            4443  367888888899999999887654332210        0  0111122222  245788888999999999999


Q ss_pred             ceeeeecc
Q psy10867        311 RQCLRTIQ  318 (343)
Q Consensus       311 ~~~~~~~~  318 (343)
                      |+.+..+.
T Consensus       338 G~~~~~~~  345 (376)
T 3q7m_A          338 GRFVAQQK  345 (376)
T ss_dssp             CCEEEEEE
T ss_pred             CcEEEEEe
Confidence            99888776

>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*

Probab=99.61  E-value=6.8e-14  Score=125.34  Aligned_cols=237  Identities=12%  Similarity=0.088  Sum_probs=151.7

Q ss_pred             cceEEEEeCCceEEEEE-----cCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-ecC-------------
Q psy10867         38 SPHSMCLLGNDYVLGVE-----KGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SIE-------------   98 (343)
Q Consensus        38 ~v~~~~~~~~~~~~~~~-----~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d-------------   98 (343)
                      .+..++|||||++++.+     ++...|++||+.+++.+... ........++|+ |++.|+. ..+             
T Consensus       130 ~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~-~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~  207 (693)
T 3iuj_A          130 ALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETP-LKDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQ  207 (693)
T ss_dssp             EEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEE-EEEEESCCCEEE-TTTEEEEEESSCCC-------CCC
T ss_pred             EEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccc-cCCceeccEEEe-CCCEEEEEEecCcccccccccCCC
Confidence            68889999999887743     22357999999998865431 111123578899 9987775 444             


Q ss_pred             CeEEEEEccCCc----eEEEecc-cCCCeEEEEEecCCCEEEEec----CCCeEEEeecCccceeeeeecCCCCCCCCcc
Q psy10867         99 TKLHMWQISSGR----LLATASS-HYQPITIVKWSADSNFIVTGG----EDGTICVWQLSRLICKQTVAFGIPGSSGKGV  169 (343)
Q Consensus        99 ~~i~v~~~~~~~----~~~~~~~-~~~~v~~~~~~~~~~~l~s~~----~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~  169 (343)
                      ..|++|++.++.    ++..... |......+.|+||+++|+...    .+..|.++|+.++..                
T Consensus       208 ~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~----------------  271 (693)
T 3iuj_A          208 HKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENA----------------  271 (693)
T ss_dssp             CEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTC----------------
T ss_pred             cEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCC----------------
Confidence            249999998764    2333333 455678899999999876543    235899999876521                


Q ss_pred             ccccceeeeecccccceEEEEeecCCCceEEEEeeCC---CeEEEEecCCCce--EEEe-ecCCcEEEEEEcCCCCEEEE
Q psy10867        170 TGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHD---RTCKIFDLCTGED--LLSL-ILDTRLTCVAFDGTEDNIYM  243 (343)
Q Consensus       170 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d---~~i~~wd~~~~~~--~~~~-~~~~~i~~~~~~~~~~~l~~  243 (343)
                           ....+..+....... +++++. .+++....+   +.|..+|+.++..  ...+ .+...+.  .|+++++.|+.
T Consensus       272 -----~~~~l~~~~~~~~~~-~~~~g~-~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~  342 (693)
T 3iuj_A          272 -----PLLTVQGDLDADVSL-VDNKGS-TLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFA  342 (693)
T ss_dssp             -----CCEEEECSSSSCEEE-EEEETT-EEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEE
T ss_pred             -----ceEEEeCCCCceEEE-EeccCC-EEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEE
Confidence                 122233444444444 566663 455554443   6899999988754  2233 3444444  88999998887


Q ss_pred             EcCCC---cEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCC----CcEEEEecccce
Q psy10867        244 GTSEG---VIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSAD----ETLKIWHTISRQ  312 (343)
Q Consensus       244 ~~~d~---~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d----g~i~iwd~~~~~  312 (343)
                      ...++   .|++||+..... ...         .+ .....+..+.++++++.|+....+    +.|+.||+.+++
T Consensus       343 ~~~~~g~~~l~~~d~~g~~~-~~l---------~~-p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~  407 (693)
T 3iuj_A          343 EYMVDATARVEQFDYEGKRV-REV---------AL-PGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGA  407 (693)
T ss_dssp             EEEETTEEEEEEECTTSCEE-EEE---------CC-SSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCC
T ss_pred             EEEECCeeEEEEEECCCCee-EEe---------ec-CCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCe
Confidence            66544   678888764221 111         11 133457777888888866655444    789999987765

>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A

Probab=99.60  E-value=1.4e-13  Score=116.81  Aligned_cols=287  Identities=8%  Similarity=0.020  Sum_probs=189.5

Q ss_pred             EEEecCCCCeEEEEecCCceEEEEEecCC---------------------------------------CCcceEEEEeC-
Q psy10867          7 VAFSYDGSGAISVWEPKGGTLLMSYKGAS---------------------------------------VLSPHSMCLLG-   46 (343)
Q Consensus         7 ~~~s~~~dg~i~iwd~~~~~~~~~~~~~~---------------------------------------~~~v~~~~~~~-   46 (343)
                      ..+|++..|.++|+-+.+++.+..+....                                       + .....+.|. 
T Consensus        17 ~f~s~g~~g~~~v~g~ps~r~~~~i~vf~~~~~~g~g~~~es~~~l~~~~~~~~~~~~~~~g~~~~~~g-d~hh~~~s~t   95 (595)
T 1fwx_A           17 GFWSSGQSGEMRILGIPSMRELMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAANGKRIHDNG-DLHHVHMSFT   95 (595)
T ss_dssp             EEECCBTTCEEEEEEETTCCEEEEEESSSCCTTTCTTTBHHHHHHHHTTCCHHHHHHHHHTTCSSCCCC-CBCCEEEEEE
T ss_pred             EEeeCCcCceEEEEecCCcceEEEeeeecCCCCcccCCchhHHHHHhccCCccchhhhhccCceecccC-CCCccccCCC
Confidence            34566668999999999988887653210                                       1 222355554 


Q ss_pred             ----CceEEEEE-cCCCeEEEEeCCCcccceecc-cCCcceEEEEE-C-CCCCEEEEec-------------------CC
Q psy10867         47 ----NDYVLGVE-KGKPMIQAWPVNSQEKAQLRL-ICPGRISSMQA-S-PDAAYIAVSI-------------------ET   99 (343)
Q Consensus        47 ----~~~~~~~~-~~~~~i~iw~~~~~~~~~~~~-~~~~~v~~~~~-s-~~~~~l~~~~-------------------d~   99 (343)
                          ||+++... .+++.|.+.|+.+.++.++.. ........+++ + |+++++.++.                   ++
T Consensus        96 ~g~~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~  175 (595)
T 1fwx_A           96 EGKYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVN  175 (595)
T ss_dssp             TTEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEE
T ss_pred             CCCcCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCc
Confidence                77666554 445689999999998776443 23345788888 5 8999888752                   34


Q ss_pred             eEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCe---------------EEEeecCccceeeeeecCCCCC
Q psy10867        100 KLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGT---------------ICVWQLSRLICKQTVAFGIPGS  164 (343)
Q Consensus       100 ~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~---------------i~iwd~~~~~~~~~~~~~~~~~  164 (343)
                      .+.++|.++.+...++.--. ....++++|+|+++++.+.+..               |.+.|....             
T Consensus       176 ~vtvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~-------------  241 (595)
T 1fwx_A          176 VFTAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEI-------------  241 (595)
T ss_dssp             EEEEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHH-------------
T ss_pred             eEEEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccce-------------
Confidence            79999999988887776322 3467889999999998886542               223322211             


Q ss_pred             CCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCC--Cce-EEEeecCCcEEEEEEcCCCCEE
Q psy10867        165 SGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCT--GED-LLSLILDTRLTCVAFDGTEDNI  241 (343)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~--~~~-~~~~~~~~~i~~~~~~~~~~~l  241 (343)
                                        .      .+.++|.  +...    +.+.+.|.++  ++. +..+.......++.++|||+++
T Consensus       242 ------------------~------~~v~~Gk--~~~i----~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v  291 (595)
T 1fwx_A          242 ------------------E------KAIAAGD--YQEL----NGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHL  291 (595)
T ss_dssp             ------------------H------HHHHHTC--SEEE----TTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEE
T ss_pred             ------------------e------EeccCCC--eeEE----CcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEE
Confidence                              0      1334453  2222    4599999998  555 6677777788899999999988


Q ss_pred             EEEc-CCCcEEEEEeecccccccccccCCCC-CCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEeccc---------
Q psy10867        242 YMGT-SEGVIKSFCLRQVPRTRDHHIQDSTS-NPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTIS---------  310 (343)
Q Consensus       242 ~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~---------  310 (343)
                      ++++ .+.+|.++|+.+......-.+..... .... .-......++|+|+|...++.-.|+.|.+||+.+         
T Consensus       292 ~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v-~vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~  370 (595)
T 1fwx_A          292 CVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEP-ELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEK  370 (595)
T ss_dssp             EEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECC-BCCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCS
T ss_pred             EEeCCCCCeEEEEECcccccccccccCcccceEEEc-CCCCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccc
Confidence            8765 58899999999653110000000000 1111 1234578899999995555777899999999987         


Q ss_pred             -ceeeeecc-cCCce-----EEEEEccCCCeeeecc
Q psy10867        311 -RQCLRTIQ-HKGPV-----LGAFLGLLPPAIHDYD  339 (343)
Q Consensus       311 -~~~~~~~~-~~~~v-----~~~~~sp~~~~l~~~~  339 (343)
                       .+.+.++. +..+-     ....++|||++|++++
T Consensus       371 ~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~N  406 (595)
T 1fwx_A          371 VDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLS  406 (595)
T ss_dssp             CCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEE
T ss_pred             cceeEEEeecccccccceeccceEeCCCCCEEEEcC
Confidence             45666666 43322     1235689999999864

>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}

Probab=99.60  E-value=8e-13  Score=108.46  Aligned_cols=230  Identities=10%  Similarity=0.037  Sum_probs=151.6

Q ss_pred             CCCCEEEE-e-cCCeEEEEEccCC----ceEEEec------c-cCCCeEEEEEecCCCEEEEecCC------CeEEEeec
Q psy10867         88 PDAAYIAV-S-IETKLHMWQISSG----RLLATAS------S-HYQPITIVKWSADSNFIVTGGED------GTICVWQL  148 (343)
Q Consensus        88 ~~~~~l~~-~-~d~~i~v~~~~~~----~~~~~~~------~-~~~~v~~~~~~~~~~~l~s~~~d------g~i~iwd~  148 (343)
                      +++++|.+ + .++.|+++|+.+.    +...+++      . ....-..+...|++ .++++..+      |.|.+.|.
T Consensus        93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~  171 (462)
T 2ece_A           93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH  171 (462)
T ss_dssp             CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred             ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence            78888886 3 5789999998755    5555553      1 11234567888999 66665554      78999999


Q ss_pred             CccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEee-------------------CCCeE
Q psy10867        149 SRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVS-------------------HDRTC  209 (343)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~-------------------~d~~i  209 (343)
                      .+.+...++..+                   ......-..+.|+|++  +.+++..                   ...+|
T Consensus       172 ~T~~v~~~~~~~-------------------~~~~~~~Yd~~~~p~~--~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V  230 (462)
T 2ece_A          172 YSFEPLGKWEID-------------------RGDQYLAYDFWWNLPN--EVLVSSEWAVPNTIEDGLKLEHLKDRYGNRI  230 (462)
T ss_dssp             TTCCEEEECCSB-------------------CTTCCCCCCEEEETTT--TEEEECBCCCHHHHTTCCCTTTHHHHSCCEE
T ss_pred             CCCeEEEEEccC-------------------CCCccccceEEECCCC--CEEEEccCcCccccccccchhhhhhccCCEE
Confidence            988766554311                   0111223468889998  6777764                   37899


Q ss_pred             EEEecCCCceEEEeecC---CcEEEEEE--cCCCCEEEEEc------CCCcEEEEEeeccccc--ccccccCCCCCCcc-
Q psy10867        210 KIFDLCTGEDLLSLILD---TRLTCVAF--DGTEDNIYMGT------SEGVIKSFCLRQVPRT--RDHHIQDSTSNPDF-  275 (343)
Q Consensus       210 ~~wd~~~~~~~~~~~~~---~~i~~~~~--~~~~~~l~~~~------~d~~i~i~d~~~~~~~--~~~~~~~~~~~~~~-  275 (343)
                      .+||+.+++.+.++...   .....+.|  +|+++++++++      .+++|.+|......-.  ..+.+........+ 
T Consensus       231 ~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp  310 (462)
T 2ece_A          231 HFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLP  310 (462)
T ss_dssp             EEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCC
T ss_pred             EEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCcccccccc
Confidence            99999999888888764   34556656  99999998877      4568887766531100  00000000000011 


Q ss_pred             ------ccccCcEEEEEEccCCCEEEEEeC-CCcEEEEeccc---ceeeeecccCC---------------ceEEEEEcc
Q psy10867        276 ------IGHEKQVTSLSCSITGITLLSSSA-DETLKIWHTIS---RQCLRTIQHKG---------------PVLGAFLGL  330 (343)
Q Consensus       276 ------~~~~~~v~~~~~s~~~~~l~s~~~-dg~i~iwd~~~---~~~~~~~~~~~---------------~v~~~~~sp  330 (343)
                            .+-......+.+||||++|.++.. .+.|.+||+..   .+.+..+...+               ....++++|
T Consensus       311 ~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSp  390 (462)
T 2ece_A          311 EILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISR  390 (462)
T ss_dssp             GGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECT
T ss_pred             ccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcC
Confidence                  111245788999999998876654 68999999863   35555554321               368899999


Q ss_pred             CCCeeeecc
Q psy10867        331 LPPAIHDYD  339 (343)
Q Consensus       331 ~~~~l~~~~  339 (343)
                      ||++|++++
T Consensus       391 DGk~LyVaN  399 (462)
T 2ece_A          391 DGRRVYVTN  399 (462)
T ss_dssp             TSSEEEEEC
T ss_pred             CCCEEEEEc
Confidence            999999876

>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1

Probab=99.59  E-value=7.8e-14  Score=113.85  Aligned_cols=253  Identities=8%  Similarity=-0.140  Sum_probs=162.8

Q ss_pred             ceEEEEEcCCC----eEEEEeCCCcccceecccCCcceEEEEECCCCCEEEEec-----------CCeEEEEEccCCceE
Q psy10867         48 DYVLGVEKGKP----MIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSI-----------ETKLHMWQISSGRLL  112 (343)
Q Consensus        48 ~~~~~~~~~~~----~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-----------d~~i~v~~~~~~~~~  112 (343)
                      .+++++...++    .|.++|..+++.+..+.....+  .+.++||++++.++.           ++.|.+||+.+++.+
T Consensus        32 ~~~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv  109 (368)
T 1mda_H           32 RRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPI  109 (368)
T ss_dssp             TEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEE
T ss_pred             CeEEEECCccCCccceEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEE
Confidence            34555555445    8889999999988666544455  799999998888642           578999999999999


Q ss_pred             EEeccc-------CCCeEEEEEecCCCEEEEecC--CCeEEE--eecCccceeeeeecCCCCCCCCccccccceeeeecc
Q psy10867        113 ATASSH-------YQPITIVKWSADSNFIVTGGE--DGTICV--WQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQ  181 (343)
Q Consensus       113 ~~~~~~-------~~~v~~~~~~~~~~~l~s~~~--dg~i~i--wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (343)
                      .++...       ......+.++|||++++++..  +..+.+  +|..+   ...+.                    . +
T Consensus       110 ~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~--------------------v-~  165 (368)
T 1mda_H          110 ADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTK--------------------S-A  165 (368)
T ss_dssp             EEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEE--------------------C-S
T ss_pred             EEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEE--------------------C-C
Confidence            887533       123568999999999998864  467888  99877   22221                    0 0


Q ss_pred             cccceEEEEeecCCCceEEEEeeCCCeEEEEecCC-----CceEEE----ee-cCCcEEEEEEcCCCCEEEEEcCCCcEE
Q psy10867        182 HSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCT-----GEDLLS----LI-LDTRLTCVAFDGTEDNIYMGTSEGVIK  251 (343)
Q Consensus       182 ~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~-----~~~~~~----~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~  251 (343)
                        .   +..+.|++. ..+++.+.|+.+.+.|+.+     ++....    +. ...+.   . .+++..++..+. +.+.
T Consensus       166 --~---~~~~~p~g~-~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~---~-~~~~~~~~~vs~-~~V~  234 (368)
T 1mda_H          166 --S---CFHIHPGAA-ATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA---Q-ANYPGMLVWAVA-SSIL  234 (368)
T ss_dssp             --S---CCCCEEEET-TEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE---E-ETTTTEEEECBS-SCCE
T ss_pred             --C---ceEEccCCC-eEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc---c-cccCCEEEEEcC-CEEE
Confidence              0   022345554 4556677788888888876     433211    11 12233   3 666676666666 9999


Q ss_pred             EEEeeccccc--ccccccCCC-CCCccccccCcEEEEEEccCCCEEEEEeC---------CCcEEEEecccceeeeeccc
Q psy10867        252 SFCLRQVPRT--RDHHIQDST-SNPDFIGHEKQVTSLSCSITGITLLSSSA---------DETLKIWHTISRQCLRTIQH  319 (343)
Q Consensus       252 i~d~~~~~~~--~~~~~~~~~-~~~~~~~~~~~v~~~~~s~~~~~l~s~~~---------dg~i~iwd~~~~~~~~~~~~  319 (343)
                      +.|+......  ..+.+.... .....  .......++++||++.++.+..         ++.+.++|+.+++.+.++..
T Consensus       235 viD~~~~~~~v~~~~~~~~~~~~~~~~--~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~v  312 (368)
T 1mda_H          235 QGDIPAAGATMKAAIDGNESGRKADNF--RSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISN  312 (368)
T ss_dssp             EEECCSSCCEEECCCCSSCTHHHHTTE--EECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEE
T ss_pred             EEECCCCcceEEEEEEecccccccccc--ccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEEC
Confidence            9998642211  101000000 00000  0111122689999988776533         23566999999999999985


Q ss_pred             CCceEEEEEccCCCeeeecc
Q psy10867        320 KGPVLGAFLGLLPPAIHDYD  339 (343)
Q Consensus       320 ~~~v~~~~~sp~~~~l~~~~  339 (343)
                      ......++|+|||++++.++
T Consensus       313 g~~p~gi~~s~Dg~~l~va~  332 (368)
T 1mda_H          313 GHDSDAIIAAQDGASDNYAN  332 (368)
T ss_dssp             EEEECEEEECCSSSCEEEEE
T ss_pred             CCCcceEEECCCCCEEEEEc
Confidence            55789999999999765544

>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}

Probab=99.59  E-value=7.1e-14  Score=113.94  Aligned_cols=278  Identities=10%  Similarity=0.004  Sum_probs=178.6

Q ss_pred             EEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEE
Q psy10867          7 VAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQA   86 (343)
Q Consensus         7 ~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~   86 (343)
                      .++.++.++.|..|| .+++.+..+..+.. .+.++...+++.+.++ .. + +..+|. +++................+
T Consensus        32 ~l~v~t~~~~l~~~d-~~g~~~~~~~~~~~-~~~~~~~~~~g~l~v~-t~-~-l~~~d~-~g~~~~~~~~~~~~~~~~~~  105 (330)
T 3hxj_A           32 TIYLGSSNKNLYAIN-TDGSVKWFFKSGEI-IECRPSIGKDGTIYFG-SD-K-VYAINP-DGTEKWRFDTKKAIVSDFTI  105 (330)
T ss_dssp             CEECSSTTTTTEEEC-TTSCEEESSCGGGE-EEECCEETTTTEECCS-SC-E-EEEECC-CGGGGGGSCC-----CCEEE
T ss_pred             eEEEEcCCCEEEEEC-CCCcEEEEEecCCC-cccceEEecCCcEEEe-cC-c-EEEECC-CCcEEEEEECCCCcccCceE
Confidence            455566678899999 88988777665554 5677777778876664 34 3 888886 55544333222222222333


Q ss_pred             CCCCCEEEEecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCC
Q psy10867         87 SPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSG  166 (343)
Q Consensus        87 s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~  166 (343)
                      . ++.+.+++.++.|..+|.. ++.......+...+.++...+++. ++.++.++.|..+|.. +......         
T Consensus       106 ~-~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~---------  172 (330)
T 3hxj_A          106 F-EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRF---------  172 (330)
T ss_dssp             E-TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEE---------
T ss_pred             E-CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEE---------
Confidence            3 6666667778999999988 777766665555566677776666 6667788999999988 5433322         


Q ss_pred             CccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeec-CCcEEEEEEcCCCCEEEEEc
Q psy10867        167 KGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLIL-DTRLTCVAFDGTEDNIYMGT  245 (343)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~  245 (343)
                                   ......+.++...+++  .+ ..++  +.+..+| .+++....... ...+.++...+++. |++++
T Consensus       173 -------------~~~~~~~~~~~~d~~g--~l-~v~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t  232 (330)
T 3hxj_A          173 -------------KTNDAITSAASIGKDG--TI-YFGS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGT-IYVTS  232 (330)
T ss_dssp             -------------ECSSCCCSCCEECTTC--CE-EEES--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSC-EEEEE
T ss_pred             -------------ecCCCceeeeEEcCCC--EE-EEEe--CEEEEEC-CCCcEEEEEccCCcceeceEECCCCe-EEEEc
Confidence                         1223445666676666  44 4444  8899999 78877776653 34577888888775 55566


Q ss_pred             CCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc-cCCceE
Q psy10867        246 SEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVL  324 (343)
Q Consensus       246 ~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~  324 (343)
                      .++.+..+|.. .....           .+......+..+.+.+++ .|..++.+|.|..+|. +++.+..+. ....+.
T Consensus       233 ~~~gl~~~~~~-g~~~~-----------~~~~~~~~~~~~~~~~~g-~l~v~t~~ggl~~~d~-~g~~~~~~~~~~~~~~  298 (330)
T 3hxj_A          233 LDGHLYAINPD-GTEKW-----------RFKTGKRIESSPVIGNTD-TIYFGSYDGHLYAINP-DGTEKWNFETGSWIIA  298 (330)
T ss_dssp             TTTEEEEECTT-SCEEE-----------EEECSSCCCSCCEECTTS-CEEEECTTCEEEEECT-TSCEEEEEECSSCCCS
T ss_pred             CCCeEEEECCC-CCEeE-----------EeeCCCCccccceEcCCC-eEEEecCCCCEEEECC-CCcEEEEEEcCCcccc
Confidence            67788888642 22211           111122223344555555 5667778888999995 777777766 555677


Q ss_pred             EEEEccCCCeeee
Q psy10867        325 GAFLGLLPPAIHD  337 (343)
Q Consensus       325 ~~~~sp~~~~l~~  337 (343)
                      ++...++++..+.
T Consensus       299 ~~~~d~~g~l~~g  311 (330)
T 3hxj_A          299 TPVIDENGTIYFG  311 (330)
T ss_dssp             CCEECTTCCEEEE
T ss_pred             ceEEcCCCEEEEE
Confidence            7788788876654

>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*

Probab=99.55  E-value=8.2e-13  Score=118.37  Aligned_cols=227  Identities=14%  Similarity=0.100  Sum_probs=145.6

Q ss_pred             CCcceEEEEECCCCCEEEEe-----cC-CeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCC---------
Q psy10867         77 CPGRISSMQASPDAAYIAVS-----IE-TKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDG---------  141 (343)
Q Consensus        77 ~~~~v~~~~~s~~~~~l~~~-----~d-~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg---------  141 (343)
                      +...+..++|||||++||-+     .+ ..|++||+.+++.+.... +......++|+ |++.|+.++.+.         
T Consensus       127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~-~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~  204 (693)
T 3iuj_A          127 GTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPL-KDVKFSGISWL-GNEGFFYSSYDKPDGSELSAR  204 (693)
T ss_dssp             SCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEE-EEEESCCCEEE-TTTEEEEEESSCCC-------
T ss_pred             CcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcccc-CCceeccEEEe-CCCEEEEEEecCccccccccc
Confidence            44578899999999999842     11 479999999998654311 11112467899 999998887764         


Q ss_pred             ----eEEEeecCccceeeeeecCCCCCCCCccccccceeeeecc-cccceEEEEeecCCCceEEE-Eee---CCCeEEEE
Q psy10867        142 ----TICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQ-HSLPVTHVTLSKLGAKSRVA-SVS---HDRTCKIF  212 (343)
Q Consensus       142 ----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~l~-~~~---~d~~i~~w  212 (343)
                          .|++|++.+.....                  ..+..... |......+.++|++  ++|+ +.+   .++.|+++
T Consensus       205 ~~~~~v~~~~lgt~~~~~------------------~~v~~~~~~~~~~~~~~~~SpDg--~~l~~~~~~~~~~~~i~~~  264 (693)
T 3iuj_A          205 TDQHKVYFHRLGTAQEDD------------------RLVFGAIPAQHHRYVGATVTEDD--RFLLISAANSTSGNRLYVK  264 (693)
T ss_dssp             CCCCEEEEEETTSCGGGC------------------EEEESCSGGGCCSEEEEEECTTS--CEEEEEEESSSSCCEEEEE
T ss_pred             CCCcEEEEEECCCCcccc------------------eEEEecCCCCCeEEEEEEEcCCC--CEEEEEEccCCCCcEEEEE
Confidence                39999987753211                  12222233 44557889999999  5554 333   23589999


Q ss_pred             ecCCCc-eEEEee-cCCcEEEEEEcCCCCEEEEEcC----CCcEEEEEeecccccccccccCCCCCCccccccCcEEEEE
Q psy10867        213 DLCTGE-DLLSLI-LDTRLTCVAFDGTEDNIYMGTS----EGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLS  286 (343)
Q Consensus       213 d~~~~~-~~~~~~-~~~~i~~~~~~~~~~~l~~~~~----d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  286 (343)
                      |+.++. ....+. ........ +++++..|+..+.    .+.|..+|+.......         ...+..|...+.  .
T Consensus       265 d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~---------~~~l~~~~~~~~--~  332 (693)
T 3iuj_A          265 DLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAH---------WRDLIPERQQVL--T  332 (693)
T ss_dssp             ETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGG---------CEEEECCCSSCE--E
T ss_pred             ECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccc---------cEEEecCCCCEE--E
Confidence            998764 233333 33334443 6677776665443    3578888887643210         123444555554  8


Q ss_pred             EccCCCEEEEEeCCC---cEEEEecccceeeeecc--cCCceEEEEEccCCCeeeec
Q psy10867        287 CSITGITLLSSSADE---TLKIWHTISRQCLRTIQ--HKGPVLGAFLGLLPPAIHDY  338 (343)
Q Consensus       287 ~s~~~~~l~s~~~dg---~i~iwd~~~~~~~~~~~--~~~~v~~~~~sp~~~~l~~~  338 (343)
                      |+++++.|+....++   .|++|++..+ ....+.  ..+.+..+.++|+++.|+..
T Consensus       333 ~s~~g~~lv~~~~~~g~~~l~~~d~~g~-~~~~l~~p~~~~~~~~~~~~d~~~l~~~  388 (693)
T 3iuj_A          333 VHSGSGYLFAEYMVDATARVEQFDYEGK-RVREVALPGLGSVSGFNGKHDDPALYFG  388 (693)
T ss_dssp             EEEETTEEEEEEEETTEEEEEEECTTSC-EEEEECCSSSSEEEECCCCTTCSCEEEE
T ss_pred             EEEECCEEEEEEEECCeeEEEEEECCCC-eeEEeecCCCceEEeeecCCCCCEEEEE
Confidence            899998887665543   6899998744 344444  44567788888888876643

>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1

Probab=99.53  E-value=4.8e-12  Score=112.52  Aligned_cols=255  Identities=11%  Similarity=0.076  Sum_probs=165.2

Q ss_pred             eEEEecCCCCeEEEEecCCceEEEEEecC-CC---CcceE-EEEeCCceEEEEEcC-----CCeEEEEeCCCcccceecc
Q psy10867          6 EVAFSYDGSGAISVWEPKGGTLLMSYKGA-SV---LSPHS-MCLLGNDYVLGVEKG-----KPMIQAWPVNSQEKAQLRL   75 (343)
Q Consensus         6 ~~~~s~~~dg~i~iwd~~~~~~~~~~~~~-~~---~~v~~-~~~~~~~~~~~~~~~-----~~~i~iw~~~~~~~~~~~~   75 (343)
                      ..+|.++.|+.|..+|..+|+.+.++..+ ..   ..+.+ ... .++.+++....     ++.|..+|..+++.+..+.
T Consensus       129 ~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v-~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~  207 (677)
T 1kb0_A          129 GKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRV-FKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWF  207 (677)
T ss_dssp             TEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEE-ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred             CEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEE-ECCEEEEEecccccCCCCEEEEEECCCCcEEEEec
Confidence            45777788999999999999999998865 20   01221 122 25666665542     5899999999998774332


Q ss_pred             cCCc--------------------------------ceEEEEECCCCCEEEEe-cC-------------------CeEEE
Q psy10867         76 ICPG--------------------------------RISSMQASPDAAYIAVS-IE-------------------TKLHM  103 (343)
Q Consensus        76 ~~~~--------------------------------~v~~~~~s~~~~~l~~~-~d-------------------~~i~v  103 (343)
                      ....                                ....+++.|++.++..+ .+                   +.|..
T Consensus       208 ~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~A  287 (677)
T 1kb0_A          208 SVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVA  287 (677)
T ss_dssp             SSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEE
T ss_pred             cCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEE
Confidence            1110                                11256788887777753 22                   25999


Q ss_pred             EEccCCceEEEecc--cC-------CCeEEEEEecCC---CEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCcccc
Q psy10867        104 WQISSGRLLATASS--HY-------QPITIVKWSADS---NFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTG  171 (343)
Q Consensus       104 ~~~~~~~~~~~~~~--~~-------~~v~~~~~~~~~---~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  171 (343)
                      +|..+|+.+..++.  |.       ....-+....+|   ..++.++.+|.+.++|..+++.+....+....-. .....
T Consensus       288 lD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~-~~~d~  366 (677)
T 1kb0_A          288 LDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWA-SGYDK  366 (677)
T ss_dssp             ECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSE-EEECT
T ss_pred             EECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcc-cccCC
Confidence            99999998877653  21       122233344477   6899999999999999999988877654321100 00000


Q ss_pred             ccceee------------eecccc--cceEEEEeecCCCceEEEEeeC--------------------------------
Q psy10867        172 LTEPLH------------VKSQHS--LPVTHVTLSKLGAKSRVASVSH--------------------------------  205 (343)
Q Consensus       172 ~~~~~~------------~~~~~~--~~v~~~~~~~~~~~~~l~~~~~--------------------------------  205 (343)
                      ...++.            ...+..  ..-..++++|+.  .++++...                                
T Consensus       367 ~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~--~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~  444 (677)
T 1kb0_A          367 HGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQT--GLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAK  444 (677)
T ss_dssp             TSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTT--TEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCE
T ss_pred             CCceeeccccCcCCCccEECcCcccccCCCCceEcCCC--CEEEEeChhcceeeeccccccccccccccccccccccccc
Confidence            000000            000000  001256778876  45555332                                


Q ss_pred             -----------CCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccc
Q psy10867        206 -----------DRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDH  264 (343)
Q Consensus       206 -----------d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~  264 (343)
                                 .+.|..||+.+++.+.++.+..+.....+...+..+++++.||.+++||.++.+....+
T Consensus       445 ~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~  514 (677)
T 1kb0_A          445 FFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEA  514 (677)
T ss_dssp             EECSSCCCSCCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred             ccccccCCCCCccEEEEEeCCCCcEEeecCCCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeee
Confidence                       27899999999999999887766666667778889999999999999999987765544

>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}

Probab=99.52  E-value=8e-12  Score=111.36  Aligned_cols=257  Identities=9%  Similarity=0.055  Sum_probs=161.3

Q ss_pred             eEEEecCCCCeEEEEecCCceEEEEEecC-CCCcceEEEEeC---CceEEEEEc-----CCCeEEEEeCCCcccceeccc
Q psy10867          6 EVAFSYDGSGAISVWEPKGGTLLMSYKGA-SVLSPHSMCLLG---NDYVLGVEK-----GKPMIQAWPVNSQEKAQLRLI   76 (343)
Q Consensus         6 ~~~~s~~~dg~i~iwd~~~~~~~~~~~~~-~~~~v~~~~~~~---~~~~~~~~~-----~~~~i~iw~~~~~~~~~~~~~   76 (343)
                      ..+|.++.|+.|..+|..+|+.+.++... .......+..+|   ++.+++...     .+|.|..||..+++.+..+..
T Consensus       122 g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~  201 (689)
T 1yiq_A          122 GKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYT  201 (689)
T ss_dssp             TEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred             CEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecc
Confidence            46777888999999999999999888763 110111222222   666666543     258999999999987643321


Q ss_pred             C---C----------------------------cceEEEEECCCCCEEEEe-cCC-------------------eEEEEE
Q psy10867         77 C---P----------------------------GRISSMQASPDAAYIAVS-IET-------------------KLHMWQ  105 (343)
Q Consensus        77 ~---~----------------------------~~v~~~~~s~~~~~l~~~-~d~-------------------~i~v~~  105 (343)
                      .   .                            ..-..+++.|++.++..+ .++                   .|..+|
T Consensus       202 ~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD  281 (689)
T 1yiq_A          202 VPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVN  281 (689)
T ss_dssp             SCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEE
T ss_pred             cCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEE
Confidence            0   0                            011256788877777763 333                   499999


Q ss_pred             ccCCceEEEecc--cC-------CCeEEEEEecCCC---EEEEecCCCeEEEeecCccceeeeeecCCCC-------CCC
Q psy10867        106 ISSGRLLATASS--HY-------QPITIVKWSADSN---FIVTGGEDGTICVWQLSRLICKQTVAFGIPG-------SSG  166 (343)
Q Consensus       106 ~~~~~~~~~~~~--~~-------~~v~~~~~~~~~~---~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~-------~~~  166 (343)
                      .++|+.+..++.  |.       .+........+++   .++.++.+|.++++|..+++.+....+....       ...
T Consensus       282 ~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~  361 (689)
T 1yiq_A          282 ADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTG  361 (689)
T ss_dssp             TTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTT
T ss_pred             ccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCC
Confidence            999999877753  21       1222222333565   7889999999999999999887655432210       000


Q ss_pred             Ccc--------ccccceeeeecccc--cceEEEEeecCCCceEEEEeeC-------------------------------
Q psy10867        167 KGV--------TGLTEPLHVKSQHS--LPVTHVTLSKLGAKSRVASVSH-------------------------------  205 (343)
Q Consensus       167 ~~~--------~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~l~~~~~-------------------------------  205 (343)
                      ...        ....+......+..  ..-..++++|+.  .++++...                               
T Consensus       362 ~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~--~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  439 (689)
T 1yiq_A          362 RPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDT--GLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMM  439 (689)
T ss_dssp             EEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTT--TEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCC
T ss_pred             CcccchhhccccCCCCeeEeCCCcccccCCCcceECCCC--CEEEEeccccceeeeeccccccccccccccccCcccccc
Confidence            000        00000000000000  011236677765  44444311                               


Q ss_pred             --------------CCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccc
Q psy10867        206 --------------DRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDH  264 (343)
Q Consensus       206 --------------d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~  264 (343)
                                    +|.|+.||+.+++.+.++....+...-.+...+.++++++.||.++.||.++++...++
T Consensus       440 p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~  512 (689)
T 1yiq_A          440 PEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQ  512 (689)
T ss_dssp             CSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred             CcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCCccCccceECCCEEEEECCCCcEEEEECCCCccceee
Confidence                          48899999999999999887665555566677889999999999999999987765443

>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}

Probab=99.52  E-value=2.3e-11  Score=99.91  Aligned_cols=232  Identities=10%  Similarity=0.013  Sum_probs=147.9

Q ss_pred             eEEEecCCCCeEEEEecCCc----eEEEEEe-------cCCCCcceEEEEeCCceEEEEEcCC------CeEEEEeCCCc
Q psy10867          6 EVAFSYDGSGAISVWEPKGG----TLLMSYK-------GASVLSPHSMCLLGNDYVLGVEKGK------PMIQAWPVNSQ   68 (343)
Q Consensus         6 ~~~~s~~~dg~i~iwd~~~~----~~~~~~~-------~~~~~~v~~~~~~~~~~~~~~~~~~------~~i~iw~~~~~   68 (343)
                      .+.+++-.++.|+|.|+.+.    +..++++       .... ....+..+|+| ++++...+      |.|.++|.++.
T Consensus        97 ~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s-~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~  174 (462)
T 2ece_A           97 FLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYS-RLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSF  174 (462)
T ss_dssp             EEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEE-EEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTC
T ss_pred             EEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCC-cccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCC
Confidence            35556666899999998765    6677773       1222 56778889999 55554443      68999999999


Q ss_pred             ccceecccCC---cceEEEEECCCCCEEEEec--------------------CCeEEEEEccCCceEEEeccc-C-CCeE
Q psy10867         69 EKAQLRLICP---GRISSMQASPDAAYIAVSI--------------------ETKLHMWQISSGRLLATASSH-Y-QPIT  123 (343)
Q Consensus        69 ~~~~~~~~~~---~~v~~~~~s~~~~~l~~~~--------------------d~~i~v~~~~~~~~~~~~~~~-~-~~v~  123 (343)
                      +.+.......   ..-..+.|+|+++.++++.                    ..+|.+||+.+++.++++... . ....
T Consensus       175 ~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~  254 (462)
T 2ece_A          175 EPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMAL  254 (462)
T ss_dssp             CEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEE
T ss_pred             eEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccc
Confidence            8886554221   2244688899999988874                    679999999998888777642 1 2345


Q ss_pred             EEEE--ecCCCEEEEec------CCCeEEEeecCccceee--eeecCCCCCCCCccccccceeeeecccccceEEEEeec
Q psy10867        124 IVKW--SADSNFIVTGG------EDGTICVWQLSRLICKQ--TVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSK  193 (343)
Q Consensus       124 ~~~~--~~~~~~l~s~~------~dg~i~iwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  193 (343)
                      .+.|  +|++++++.+.      .+++|.+|..+.+....  .+..........    .......+.+-......+.+++
T Consensus       255 ~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~----lp~~~~~f~~~~~~pa~I~lS~  330 (462)
T 2ece_A          255 ELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGN----LPEILKPFKAVPPLVTDIDISL  330 (462)
T ss_dssp             EEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSS----CCGGGGGGTEECCCCCCEEECT
T ss_pred             eeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCcccccc----ccccccccccCCCceeEEEECC
Confidence            6666  99999877766      46688887765432111  110000000000    0000000000024578899999


Q ss_pred             CCCceEEEE-eeCCCeEEEEecCC---CceEEEeecCC---------------cEEEEEEcCCCCEEEEEc
Q psy10867        194 LGAKSRVAS-VSHDRTCKIFDLCT---GEDLLSLILDT---------------RLTCVAFDGTEDNIYMGT  245 (343)
Q Consensus       194 ~~~~~~l~~-~~~d~~i~~wd~~~---~~~~~~~~~~~---------------~i~~~~~~~~~~~l~~~~  245 (343)
                      ++  ++|.+ .-..+.|.+||+..   .+.+..+...+               ....++++|+|++|+++.
T Consensus       331 DG--rfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN  399 (462)
T 2ece_A          331 DD--KFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN  399 (462)
T ss_dssp             TS--CEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred             CC--CEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence            99  45544 44578999999863   34444444331               368899999999999986

>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}

Probab=99.50  E-value=2.7e-14  Score=117.90  Aligned_cols=256  Identities=10%  Similarity=0.021  Sum_probs=140.4

Q ss_pred             ceEEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCc-ceE-
Q psy10867          5 NEVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPG-RIS-   82 (343)
Q Consensus         5 ~~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~-~v~-   82 (343)
                      ...+|.++.||.|+.||..+|+.+.+++.  . .+.+..+.+++.++++++.|+.|..||..+++.+.....+.. .+. 
T Consensus         9 ~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~-~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~   85 (369)
T 2hz6_A            9 ETLLFVSTLDGSLHAVSKRTGSIKWTLKE--D-PVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQA   85 (369)
T ss_dssp             TTEEEEEETTSEEEEEETTTCCEEEEEEC--C-CSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTT
T ss_pred             CCEEEEEcCCCEEEEEECCCCCEEEEecC--C-CceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccccc
Confidence            45788888999999999999999999887  3 555555667787777777779999999988887644332211 110 


Q ss_pred             EEEECCCCCEEEEecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCC
Q psy10867         83 SMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIP  162 (343)
Q Consensus        83 ~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~  162 (343)
                      ...+..++.+++++.++.|+.||..+|+.+..+..+.    ...++|++..+++++.|+.|+.||.++++.......   
T Consensus        86 sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~---  158 (369)
T 2hz6_A           86 SPCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATY---  158 (369)
T ss_dssp             CSCC-----CCCCEEEEEEEEECCC--------------------------EEEEEEEEEEECCCSSSSSCCCEEEE---
T ss_pred             CceEecCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccccCCEEEEEecCCEEEEEECCCCCEEEeEec---
Confidence            1111134444445778999999999999887776543    234567888899999999999999999876554320   


Q ss_pred             CCCCCccccccceeeeecccccceEEEEeecCC-CceEEEEeeCCCeEEEEecCCCceEEEeecCCcEEE-EEEcCCCCE
Q psy10867        163 GSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLG-AKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTC-VAFDGTEDN  240 (343)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~~-~~~~~~~~~  240 (343)
                                    .   ..    ....+.++. ....+++++.+|.++.||.++++.+..+....++.. ..+++++..
T Consensus       159 --------------~---~~----~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~pv~~~~~~~~dg~~  217 (369)
T 2hz6_A          159 --------------F---DY----AASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNYASPVVAFYVWQREGLR  217 (369)
T ss_dssp             --------------E---EE----CCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEECSSCEEEEEECTTSSCE
T ss_pred             --------------c---cc----cCccccCCccccceEEEECCCCEEEEEECCCCcEEEEecCCCceEEEEEecCCceE
Confidence                          0   01    112222210 002567788999999999999999998887776654 344455542


Q ss_pred             E----EEEcCCCcEEEEEeeccc----ccccccccCCCCCCccccccCcEEEEEEcc--CCCEEEEEeCCCcEEEEecc
Q psy10867        241 I----YMGTSEGVIKSFCLRQVP----RTRDHHIQDSTSNPDFIGHEKQVTSLSCSI--TGITLLSSSADETLKIWHTI  309 (343)
Q Consensus       241 l----~~~~~d~~i~i~d~~~~~----~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~--~~~~l~s~~~dg~i~iwd~~  309 (343)
                      .    +.+  ++.++.+|..+++    ......         ..   ..+.    +|  .+..|+.++.||.++.++..
T Consensus       218 ~v~~~~~~--~~~l~~ld~~tG~~~~~~~W~~~---------~~---~~~~----sp~~~~g~lyv~~~~G~l~al~~~  278 (369)
T 2hz6_A          218 KVMHINVA--VETLRYLTFMSGEVGRITKWKYP---------FP---KETE----AKSKLTPTLYVGKYSTSLYASPSM  278 (369)
T ss_dssp             EECCEEEE--HHHHHHHHHHHHHHHHHHTSCCC---------CC---CHHH----HHHHSEEEECBEECSSCEECCEEE
T ss_pred             eccceeec--ccceeeeehhcCCcccceeeeec---------cC---cccc----ccccccceEEEecccCCEEecCcc
Confidence            1    112  3445666665543    222111         00   1110    12  23467777888888888765

>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}

Probab=99.48  E-value=1.9e-14  Score=118.80  Aligned_cols=204  Identities=13%  Similarity=0.101  Sum_probs=114.8

Q ss_pred             CCCEEEEecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCc
Q psy10867         89 DAAYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKG  168 (343)
Q Consensus        89 ~~~~l~~~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~  168 (343)
                      ++.+++++.|+.|+.||..+|+.+..+..  +.+.+..+..++..+++++.||.|+.||..+++........        
T Consensus         9 ~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~--------   78 (369)
T 2hz6_A            9 ETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFT--------   78 (369)
T ss_dssp             TTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCC--------
T ss_pred             CCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeecc--------
Confidence            34444457899999999999999888775  45555556667778888899999999999887654432100        


Q ss_pred             cccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcCCC
Q psy10867        169 VTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEG  248 (343)
Q Consensus       169 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~  248 (343)
                             .... ....++    +. .+  ..+++++.++.++.||.++|+.+..+.....   ..++|++..+++++.++
T Consensus        79 -------~~~~-~~~sp~----~~-~~--~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~---~~~~p~~~~v~~~~~dg  140 (369)
T 2hz6_A           79 -------IPEL-VQASPC----RS-SD--GILYMGKKQDIWYVIDLLTGEKQQTLSSAFA---DSLSPSTSLLYLGRTEY  140 (369)
T ss_dssp             -------HHHH-HTTCSC----C--------CCCCEEEEEEEEECCC-------------------------EEEEEEEE
T ss_pred             -------Cccc-cccCce----Ee-cC--CEEEEEeCCCEEEEEECCCCcEEEEecCCCc---ccccccCCEEEEEecCC
Confidence                   0000 001111    11 22  4678888999999999999999887765432   34567888999999999


Q ss_pred             cEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCC---CEEEEEeCCCcEEEEecccceeeeecccCCceEE
Q psy10867        249 VIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITG---ITLLSSSADETLKIWHTISRQCLRTIQHKGPVLG  325 (343)
Q Consensus       249 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~---~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~  325 (343)
                      .|+.||.++++.....           ..+  ......++++.   ..+++++.||.|+.||..+|+.+.++....++..
T Consensus       141 ~v~a~d~~tG~~~W~~-----------~~~--~~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~pv~~  207 (369)
T 2hz6_A          141 TITMYDTKTRELRWNA-----------TYF--DYAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNYASPVVA  207 (369)
T ss_dssp             EEECCCSSSSSCCCEE-----------EEE--EECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEECSSCEEE
T ss_pred             EEEEEECCCCCEEEeE-----------ecc--cccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEecCCCceEE
Confidence            9999999876543322           111  11222333332   5677888999999999999999988885566544


Q ss_pred             -EEEccCCC
Q psy10867        326 -AFLGLLPP  333 (343)
Q Consensus       326 -~~~sp~~~  333 (343)
                       ..+++++.
T Consensus       208 ~~~~~~dg~  216 (369)
T 2hz6_A          208 FYVWQREGL  216 (369)
T ss_dssp             EEECTTSSC
T ss_pred             EEEecCCce
Confidence             45666764

>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*

Probab=99.48  E-value=1.7e-10  Score=89.20  Aligned_cols=211  Identities=9%  Similarity=0.063  Sum_probs=145.9

Q ss_pred             ceEEEEEecCCCCcceEEEEeCCceEEEEEc--CCCeEEEEeCCCcccceeccc-CCcceEEEEECCCCCEEE-E-ecCC
Q psy10867         25 GTLLMSYKGASVLSPHSMCLLGNDYVLGVEK--GKPMIQAWPVNSQEKAQLRLI-CPGRISSMQASPDAAYIA-V-SIET   99 (343)
Q Consensus        25 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~--~~~~i~iw~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~-~-~~d~   99 (343)
                      .+.+.++..........++|+|++.+.++..  .++.|+++|+.+++.+..... .......+++.  +..|. + -.++
T Consensus         9 ~~vv~~~p~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~   86 (266)
T 2iwa_A            9 VEVLNEFPHDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKN   86 (266)
T ss_dssp             EEEEEEEECCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCS
T ss_pred             ceEEEEEECCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCC
Confidence            4567777654431358999999887777654  257999999999998765432 11222345554  44444 3 3578


Q ss_pred             eEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeee
Q psy10867        100 KLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVK  179 (343)
Q Consensus       100 ~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (343)
                      .+.++|..+.+.+.++......  ...+++|++.++.+..++.|.++|..+.+....+..                 ...
T Consensus        87 ~v~viD~~t~~v~~~i~~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~V-----------------g~~  147 (266)
T 2iwa_A           87 IGFIYDRRTLSNIKNFTHQMKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNV-----------------KYN  147 (266)
T ss_dssp             EEEEEETTTTEEEEEEECCSSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEEC-----------------EET
T ss_pred             EEEEEECCCCcEEEEEECCCCC--eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEE-----------------CCC
Confidence            9999999999988888532111  234566888777777788999999998776655431                 110


Q ss_pred             cccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecC--------------CcEEEEEEcCCCCEEEE-E
Q psy10867        180 SQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILD--------------TRLTCVAFDGTEDNIYM-G  244 (343)
Q Consensus       180 ~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~--------------~~i~~~~~~~~~~~l~~-~  244 (343)
                      ...-..++.+.+. ++  .+++....++.|.+.|..+++.+..+...              .....++|+|+++.+++ +
T Consensus       148 ~~p~~~~nele~~-dg--~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTg  224 (266)
T 2iwa_A          148 GHRVIRLNELEYI-NG--EVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTG  224 (266)
T ss_dssp             TEECCCEEEEEEE-TT--EEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEE
T ss_pred             CcccccceeEEEE-CC--EEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEEC
Confidence            0111236677877 56  56666667899999999999999888742              35689999999876655 5


Q ss_pred             cCCCcEEEEEeeccc
Q psy10867        245 TSEGVIKSFCLRQVP  259 (343)
Q Consensus       245 ~~d~~i~i~d~~~~~  259 (343)
                      ...+.+...++....
T Consensus       225 k~~~~v~~i~l~~~~  239 (266)
T 2iwa_A          225 KLWPKLFEIKLHLVR  239 (266)
T ss_dssp             TTCSEEEEEEEEECC
T ss_pred             CCCCeEEEEEEeccc
Confidence            568899999988743

>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}

Probab=99.47  E-value=1.3e-11  Score=101.09  Aligned_cols=198  Identities=8%  Similarity=0.021  Sum_probs=128.2

Q ss_pred             cceEEEEeCCceEEEEEcC-----CCeEEEEeCCCcccceeccc------CCcceEEEEECCCC-CEEEE-e---cCCeE
Q psy10867         38 SPHSMCLLGNDYVLGVEKG-----KPMIQAWPVNSQEKAQLRLI------CPGRISSMQASPDA-AYIAV-S---IETKL  101 (343)
Q Consensus        38 ~v~~~~~~~~~~~~~~~~~-----~~~i~iw~~~~~~~~~~~~~------~~~~v~~~~~s~~~-~~l~~-~---~d~~i  101 (343)
                      .+..+++++++++.++...     ++.|.+||+.+++.+..+..      +...+..+++++++ ..+++ .   .++.|
T Consensus        68 ~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i  147 (343)
T 2qe8_A           68 TVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAAL  147 (343)
T ss_dssp             CEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEE
T ss_pred             EeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeE
Confidence            7899999999988877643     47899999998875543321      22356899999865 44444 3   56899


Q ss_pred             EEEEccCCceEEEecccC-----------------------------CCeEEEEEecCCCEEEEecCCC-eEEEeecCcc
Q psy10867        102 HMWQISSGRLLATASSHY-----------------------------QPITIVKWSADSNFIVTGGEDG-TICVWQLSRL  151 (343)
Q Consensus       102 ~v~~~~~~~~~~~~~~~~-----------------------------~~v~~~~~~~~~~~l~s~~~dg-~i~iwd~~~~  151 (343)
                      .+||+.+++....+.+|.                             ..+..|+|+|+++.|+.+..++ .+..++....
T Consensus       148 ~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~  227 (343)
T 2qe8_A          148 IRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADL  227 (343)
T ss_dssp             EEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHH
T ss_pred             EEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHh
Confidence            999999888766654421                             2357899999999888876655 4444433210


Q ss_pred             ceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeec--CCcE
Q psy10867        152 ICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLIL--DTRL  229 (343)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~--~~~i  229 (343)
                      ... .+.       .   ......+ ...++......+++++++  .++++...++.|.+||..+++.......  ...+
T Consensus       228 ~~~-~~~-------~---~~~~~~~-~~~g~~g~pdgia~d~~G--~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p  293 (343)
T 2qe8_A          228 SNL-QLT-------D---AELGSKI-ERYSEKPICDGISIDKDH--NIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWT  293 (343)
T ss_dssp             TCT-TCC-------H---HHHHTTC-EEEEECCSCSCEEECTTC--CEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCE
T ss_pred             cCC-CCC-------h---hhhhcce-EecccCCCCceEEECCCC--CEEEEccCCCeEEEEECCCCCEEEEEECCceecC
Confidence            000 000       0   0000000 111233456779999998  7888888899999999856654333322  3458


Q ss_pred             EEEEEcCCCCEEEEEcCCCc
Q psy10867        230 TCVAFDGTEDNIYMGTSEGV  249 (343)
Q Consensus       230 ~~~~~~~~~~~l~~~~~d~~  249 (343)
                      ..++|.+++.++++....+.
T Consensus       294 ~~va~~~~g~l~v~~~~~~~  313 (343)
T 2qe8_A          294 DSFNFGSDGYLYFDCNQLHH  313 (343)
T ss_dssp             EEEEECTTSCEEEEECCGGG
T ss_pred             CeeEECCCCcEEEEeCcccc
Confidence            89999999887777664443

>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1

Probab=99.47  E-value=5.4e-11  Score=105.76  Aligned_cols=303  Identities=10%  Similarity=0.084  Sum_probs=183.2

Q ss_pred             ceEEEecCCCCeEEEEecCCceEEEEEecCCCCc----------ceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceec
Q psy10867          5 NEVAFSYDGSGAISVWEPKGGTLLMSYKGASVLS----------PHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLR   74 (343)
Q Consensus         5 ~~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~----------v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~   74 (343)
                      ...+|..+.++.|..+|..+|+.+.+++......          -..+++. ++++++ +..++.|..+|..+++.+...
T Consensus        66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~v-~~~dg~l~alD~~tG~~~W~~  143 (668)
T 1kv9_A           66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALW-GDKVYV-GTLDGRLIALDAKTGKAIWSQ  143 (668)
T ss_dssp             TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEE-BTEEEE-ECTTSEEEEEETTTCCEEEEE
T ss_pred             CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEEE-CCEEEE-EcCCCEEEEEECCCCCEeeee
Confidence            4456677778899999999999999887543201          0123332 344444 455599999999999877443


Q ss_pred             ccC-CcceEEEEECC---CCCEEEEec------CCeEEEEEccCCceEEEeccc---C----------------------
Q psy10867         75 LIC-PGRISSMQASP---DAAYIAVSI------ETKLHMWQISSGRLLATASSH---Y----------------------  119 (343)
Q Consensus        75 ~~~-~~~v~~~~~s~---~~~~l~~~~------d~~i~v~~~~~~~~~~~~~~~---~----------------------  119 (343)
                      ... ......+..+|   ++.+++...      ++.|..+|..+|+.+..+...   .                      
T Consensus       144 ~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w  223 (668)
T 1kv9_A          144 QTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYW  223 (668)
T ss_dssp             ECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHH
T ss_pred             ccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCcccee
Confidence            321 10001111111   455555432      589999999999988776421   0                      


Q ss_pred             ------CCeEEEEEecCCCEEEEecCCCe-------------------EEEeecCccceeeeeecCCCCCCCCccccccc
Q psy10867        120 ------QPITIVKWSADSNFIVTGGEDGT-------------------ICVWQLSRLICKQTVAFGIPGSSGKGVTGLTE  174 (343)
Q Consensus       120 ------~~v~~~~~~~~~~~l~s~~~dg~-------------------i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (343)
                            .....+++.|+...++.++.++.                   |..+|..+++....++.......         
T Consensus       224 ~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~w---------  294 (668)
T 1kv9_A          224 KLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSW---------  294 (668)
T ss_dssp             HHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCS---------
T ss_pred             eeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccc---------
Confidence                  01124678888888888887763                   99999999987776542100000         


Q ss_pred             eeeeecccccceEEEEeecCCC-ceEEEEeeCCCeEEEEecCCCceEEEeecCC-------------cE-----------
Q psy10867        175 PLHVKSQHSLPVTHVTLSKLGA-KSRVASVSHDRTCKIFDLCTGEDLLSLILDT-------------RL-----------  229 (343)
Q Consensus       175 ~~~~~~~~~~~v~~~~~~~~~~-~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~-------------~i-----------  229 (343)
                         .+ ....+.....+..++. ...++.++.+|.++++|.++|+.+.......             ++           
T Consensus       295 ---d~-~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~  370 (668)
T 1kv9_A          295 ---DF-TATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEP  370 (668)
T ss_dssp             ---CC-CCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSC
T ss_pred             ---cc-cCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCe
Confidence               00 0012222223333441 1268899999999999999999885543211             00           


Q ss_pred             -------------EEEEEcCCCCEEEEEc------------------------------------CCCcEEEEEeecccc
Q psy10867        230 -------------TCVAFDGTEDNIYMGT------------------------------------SEGVIKSFCLRQVPR  260 (343)
Q Consensus       230 -------------~~~~~~~~~~~l~~~~------------------------------------~d~~i~i~d~~~~~~  260 (343)
                                   ..++++|+...+++..                                    .+|.|..||+.+.+.
T Consensus       371 ~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~  450 (668)
T 1kv9_A          371 IVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKA  450 (668)
T ss_dssp             EEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEE
T ss_pred             eEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcE
Confidence                         1267788777766522                                    236677788776554


Q ss_pred             cccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecccCCce--EEEEEccCCCe
Q psy10867        261 TRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQHKGPV--LGAFLGLLPPA  334 (343)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v--~~~~~sp~~~~  334 (343)
                      .....            +........+...+.+++.++.|+.|+.||.++|+.+..++....+  .-+.+..+|+.
T Consensus       451 ~W~~~------------~~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~~~~~~p~~~~~~G~~  514 (668)
T 1kv9_A          451 AWKVP------------YPTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFELAGRQ  514 (668)
T ss_dssp             EEEEE------------ESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred             EEEcc------------CCCCCcCceeEeCCCEEEEECCcccchhhhhhcChhheEecCCCCcccCceEEEECCEE
Confidence            33221            1112222334456778899999999999999999999988733222  22344556653

>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1

Probab=99.46  E-value=8.7e-10  Score=86.83  Aligned_cols=246  Identities=7%  Similarity=-0.049  Sum_probs=153.2

Q ss_pred             EEEEEcCCCeEEEEeCCCcccc-----eecccCCcceEEEEECCCCCEEE-E-ecCCeEEEEEccCCceEEEecccCCCe
Q psy10867         50 VLGVEKGKPMIQAWPVNSQEKA-----QLRLICPGRISSMQASPDAAYIA-V-SIETKLHMWQISSGRLLATASSHYQPI  122 (343)
Q Consensus        50 ~~~~~~~~~~i~iw~~~~~~~~-----~~~~~~~~~v~~~~~s~~~~~l~-~-~~d~~i~v~~~~~~~~~~~~~~~~~~v  122 (343)
                      +|..+.. +.|+.++++.....     ..+......+..++|++++..|. + ..++.|..+++..+.....+.......
T Consensus         3 ~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p   81 (267)
T 1npe_A            3 HLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSP   81 (267)
T ss_dssp             EEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCE
T ss_pred             EEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCc
Confidence            4444444 57888888765432     11112234578999999765555 4 356799999987665444443333567


Q ss_pred             EEEEEecCCCE-EEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEE
Q psy10867        123 TIVKWSADSNF-IVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVA  201 (343)
Q Consensus       123 ~~~~~~~~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~  201 (343)
                      ..+++.|++.. +++-...+.|.++++......                      ............++++|++. .+++
T Consensus        82 ~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~----------------------~~~~~~~~~P~~i~vd~~~g-~lyv  138 (267)
T 1npe_A           82 EGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRR----------------------VLFDTGLVNPRGIVTDPVRG-NLYW  138 (267)
T ss_dssp             EEEEEETTTTEEEEEETTTTEEEEEETTSCSCE----------------------EEECSSCSSEEEEEEETTTT-EEEE
T ss_pred             cEEEEEecCCeEEEEECCCCEEEEEEcCCCCEE----------------------EEEECCCCCccEEEEeeCCC-EEEE
Confidence            89999996554 445556788999998653211                      01111224568999999652 4444


Q ss_pred             EeeC--CCeEEEEecCCCceEEEee--cCCcEEEEEEcCCCCEEEEEc-CCCcEEEEEeecccccccccccCCCCCCccc
Q psy10867        202 SVSH--DRTCKIFDLCTGEDLLSLI--LDTRLTCVAFDGTEDNIYMGT-SEGVIKSFCLRQVPRTRDHHIQDSTSNPDFI  276 (343)
Q Consensus       202 ~~~~--d~~i~~wd~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~  276 (343)
                      +...  .+.|..+++.. +....+.  .......++++|++..|+++. ..+.|.++|+........           ..
T Consensus       139 ~~~~~~~~~I~~~~~dg-~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~-----------~~  206 (267)
T 1npe_A          139 TDWNRDNPKIETSHMDG-TNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKV-----------LE  206 (267)
T ss_dssp             EECCSSSCEEEEEETTS-CCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEE-----------EE
T ss_pred             EECCCCCcEEEEEecCC-CCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEE-----------ec
Confidence            4433  46888888753 3333332  234578999999887776654 567899999865322110           11


Q ss_pred             cccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecccC--CceEEEEEccCCC
Q psy10867        277 GHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQHK--GPVLGAFLGLLPP  333 (343)
Q Consensus       277 ~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~--~~v~~~~~sp~~~  333 (343)
                       .......++.. ++.++++....+.|..+|..+++.+.++...  .....+++.|++.
T Consensus       207 -~~~~P~gi~~d-~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~~~~p~gi~~~~~~~  263 (267)
T 1npe_A          207 -GLQYPFAVTSY-GKNLYYTDWKTNSVIAMDLAISKEMDTFHPHKQTRLYGITIALSQC  263 (267)
T ss_dssp             -CCCSEEEEEEE-TTEEEEEETTTTEEEEEETTTTEEEEEECCSSCCCCCCEEEECSCC
T ss_pred             -CCCCceEEEEe-CCEEEEEECCCCeEEEEeCCCCCceEEEccccccccceeeecCccC
Confidence             12234566654 3444455556689999999999998888732  2578889998875

>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A

Probab=99.45  E-value=3.7e-11  Score=99.75  Aligned_cols=254  Identities=13%  Similarity=0.063  Sum_probs=158.3

Q ss_pred             EEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcce-----
Q psy10867          7 VAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRI-----   81 (343)
Q Consensus         7 ~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v-----   81 (343)
                      .++.++.++.|..+|..+|+.+..+..... ........ ++.+++.. .++.+..+|..+++.+..........     
T Consensus       105 ~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~-~~~~p~~~-~~~v~v~~-~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~  181 (376)
T 3q7m_A          105 HVYIGSEKAQVYALNTSDGTVAWQTKVAGE-ALSRPVVS-DGLVLIHT-SNGQLQALNEADGAVKWTVNLDMPSLSLRGE  181 (376)
T ss_dssp             EEEEEETTSEEEEEETTTCCEEEEEECSSC-CCSCCEEE-TTEEEEEC-TTSEEEEEETTTCCEEEEEECCC-----CCC
T ss_pred             EEEEEcCCCEEEEEECCCCCEEEEEeCCCc-eEcCCEEE-CCEEEEEc-CCCeEEEEECCCCcEEEEEeCCCCceeecCC
Confidence            455666789999999999999988876653 22233333 45555544 45899999999988764433221110     


Q ss_pred             EEEEECCCCCEEEEecCCeEEEEEccCCceEEEecccCCC-------eEEEEEec--CCCEEEEecCCCeEEEeecCccc
Q psy10867         82 SSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQP-------ITIVKWSA--DSNFIVTGGEDGTICVWQLSRLI  152 (343)
Q Consensus        82 ~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~~~~~~-------v~~~~~~~--~~~~l~s~~~dg~i~iwd~~~~~  152 (343)
                      ...... ++.+++...++.+..+|..+|+.+.........       +..+.-.|  .+..++.++.++.+..+|..+++
T Consensus       182 ~~~~~~-~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~  260 (376)
T 3q7m_A          182 SAPTTA-FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQ  260 (376)
T ss_dssp             CCCEEE-TTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCC
T ss_pred             CCcEEE-CCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCc
Confidence            111111 455555567899999999999887665432110       00011111  34677788889999999999886


Q ss_pred             eeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cC-CcEE
Q psy10867        153 CKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LD-TRLT  230 (343)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~-~~i~  230 (343)
                      ......                        ......+...  +  ..++.++.++.+..+|..+++.+.... .. ....
T Consensus       261 ~~w~~~------------------------~~~~~~~~~~--~--~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~  312 (376)
T 3q7m_A          261 IMWKRE------------------------LGSVNDFIVD--G--NRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLT  312 (376)
T ss_dssp             EEEEEC------------------------CCCEEEEEEE--T--TEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCC
T ss_pred             EEeecc------------------------CCCCCCceEE--C--CEEEEEcCCCeEEEEECCCCcEEEeecccCCCccc
Confidence            554331                        1122333333  3  467778889999999999999887765 22 2222


Q ss_pred             EEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEE-EEEEccCCCEEEEEeCCCcEEEEe
Q psy10867        231 CVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVT-SLSCSITGITLLSSSADETLKIWH  307 (343)
Q Consensus       231 ~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~s~~~~~l~s~~~dg~i~iwd  307 (343)
                      ....  .+..|++++.+|.++++|..+.+......           .....+. ....  .+..|+.++.+|.|+.|+
T Consensus       313 ~~~~--~~~~l~v~~~~g~l~~~d~~tG~~~~~~~-----------~~~~~~~~~~~~--~~~~l~v~~~~G~l~~~~  375 (376)
T 3q7m_A          313 SPVL--YNGNLVVGDSEGYLHWINVEDGRFVAQQK-----------VDSSGFQTEPVA--ADGKLLIQAKDGTVYSIT  375 (376)
T ss_dssp             CCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEE-----------CCTTCBCSCCEE--ETTEEEEEBTTSCEEEEE
T ss_pred             CCEE--ECCEEEEEeCCCeEEEEECCCCcEEEEEe-----------cCCCcceeCCEE--ECCEEEEEeCCCEEEEEe
Confidence            2333  25789999999999999988765433221           1111111 1122  245788888999999887

>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*

Probab=99.43  E-value=6.2e-11  Score=103.24  Aligned_cols=305  Identities=10%  Similarity=0.043  Sum_probs=180.7

Q ss_pred             ceEEEecCC-CCeEEEEec-CCceEEEEEecCCCCcc----------eEEEEeCCceEEEEEcCCCeEEEEeCCCcccce
Q psy10867          5 NEVAFSYDG-SGAISVWEP-KGGTLLMSYKGASVLSP----------HSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQ   72 (343)
Q Consensus         5 ~~~~~s~~~-dg~i~iwd~-~~~~~~~~~~~~~~~~v----------~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~   72 (343)
                      ...+|..+. ++.|.-+|. .+|+.+.+++......+          ..+++. ++++++. ..++.+..+|..+++.+.
T Consensus        62 ~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~v~-~~dg~l~alD~~tG~~~W  139 (571)
T 2ad6_A           62 GDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYG-AGQIVKK-QANGHLLALDAKTGKINW  139 (571)
T ss_dssp             TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEE-TTEEEEE-CTTSEEEEEETTTCCEEE
T ss_pred             CCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEE-CCEEEEE-eCCCEEEEEECCCCCEEE
Confidence            345667777 889999999 99999988765432011          123332 4455544 445899999999998774


Q ss_pred             ecccCC--c--ceEE-EEECCCCCEEEEec------CCeEEEEEccCCceEEEecccCCC--------------------
Q psy10867         73 LRLICP--G--RISS-MQASPDAAYIAVSI------ETKLHMWQISSGRLLATASSHYQP--------------------  121 (343)
Q Consensus        73 ~~~~~~--~--~v~~-~~~s~~~~~l~~~~------d~~i~v~~~~~~~~~~~~~~~~~~--------------------  121 (343)
                      ......  .  .+.+ ... .++.+++.+.      ++.|..+|..+|+.+.++......                    
T Consensus       140 ~~~~~~~~~~~~~~~~P~v-~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~  218 (571)
T 2ad6_A          140 EVEVCDPKVGSTLTQAPFV-AKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFG  218 (571)
T ss_dssp             EEECCCGGGTCBCCSCCEE-ETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSS
T ss_pred             EecCCCCCccceeccCCEE-ECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCcccccccccccccc
Confidence            332111  0  1111 011 1566665543      789999999999988766432110                    


Q ss_pred             -----------------e-EEEEEecCCCEEEEecCC----------------CeEEEeecCccceeeeeecCCCCCCCC
Q psy10867        122 -----------------I-TIVKWSADSNFIVTGGED----------------GTICVWQLSRLICKQTVAFGIPGSSGK  167 (343)
Q Consensus       122 -----------------v-~~~~~~~~~~~l~s~~~d----------------g~i~iwd~~~~~~~~~~~~~~~~~~~~  167 (343)
                                       + ..+++.++...++.+..+                +.|..+|..+++....++......   
T Consensus       219 ~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~---  295 (571)
T 2ad6_A          219 LGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDE---  295 (571)
T ss_dssp             HHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCS---
T ss_pred             cccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcc---
Confidence                             0 135566666666665532                358999999988776554210000   


Q ss_pred             ccccccceeeeecccccceEEEEeecCCCc-eEEEEeeCCCeEEEEecCCCceEEEeecCC--------------cE---
Q psy10867        168 GVTGLTEPLHVKSQHSLPVTHVTLSKLGAK-SRVASVSHDRTCKIFDLCTGEDLLSLILDT--------------RL---  229 (343)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~--------------~i---  229 (343)
                               ........++. +....++.. ..++.++.+|.++++|.++++.+.......              ++   
T Consensus       296 ---------~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~  365 (571)
T 2ad6_A          296 ---------WDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDP  365 (571)
T ss_dssp             ---------SCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECG
T ss_pred             ---------cccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceeccc
Confidence                     00001112221 222234510 256778889999999999999988765322              11   


Q ss_pred             -----------------------EEEEEcCCCCEEEEEcC-------------------------------------CCc
Q psy10867        230 -----------------------TCVAFDGTEDNIYMGTS-------------------------------------EGV  249 (343)
Q Consensus       230 -----------------------~~~~~~~~~~~l~~~~~-------------------------------------d~~  249 (343)
                                             ..++++|+..++++...                                     +|.
T Consensus       366 ~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~  445 (571)
T 2ad6_A          366 EFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQ  445 (571)
T ss_dssp             GGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEE
T ss_pred             ccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCe
Confidence                                   23578888888877643                                     356


Q ss_pred             EEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecccCCce--EEEE
Q psy10867        250 IKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQHKGPV--LGAF  327 (343)
Q Consensus       250 i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v--~~~~  327 (343)
                      |..||+.+.+......            +...+....+...+..++.++.||.|+.+|.++|+.+.+++....+  .-+.
T Consensus       446 l~a~D~~tG~~~W~~~------------~~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~  513 (571)
T 2ad6_A          446 IRAFDLTTGKAKWTKW------------EKFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMT  513 (571)
T ss_dssp             EEEECTTTCCEEEEEE------------ESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEE
T ss_pred             EEEEECCCCCEEEEec------------CCCCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeeeEE
Confidence            6677766544332211            1111222222334567777999999999999999999998733322  2244


Q ss_pred             EccCCCeeee
Q psy10867        328 LGLLPPAIHD  337 (343)
Q Consensus       328 ~sp~~~~l~~  337 (343)
                      +..+|+.++.
T Consensus       514 ~~~~G~~yv~  523 (571)
T 2ad6_A          514 YSFKGKQYIG  523 (571)
T ss_dssp             EEETTEEEEE
T ss_pred             EEECCEEEEE
Confidence            5677776554

>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*

Probab=99.43  E-value=8.3e-09  Score=94.17  Aligned_cols=292  Identities=10%  Similarity=0.041  Sum_probs=187.2

Q ss_pred             CeEEEEecCCceEEEEEe-cCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceeccc-------CCcceEEEEE
Q psy10867         15 GAISVWEPKGGTLLMSYK-GASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLI-------CPGRISSMQA   86 (343)
Q Consensus        15 g~i~iwd~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~-------~~~~v~~~~~   86 (343)
                      +.|..||..+++...... .... .|.++...+++.+.++... +-+.+||..+++.......       ....|.++..
T Consensus       193 ~Gl~~~~~~~~~~~~~~~~~~~~-~i~~i~~d~~g~lwigt~~-~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~  270 (795)
T 4a2l_A          193 DGLYTYSITQKTFEKVIPILGTK-QIQAILQQSPTRIWVATEG-AGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAM  270 (795)
T ss_dssp             SCEEEEETTTCCEEECC----CC-CEEEEEEEETTEEEEEEBS-SCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEE
T ss_pred             CCEEEEeCCCCeEEEecCCCCCC-eeEEEEEcCCCCEEEEECC-CCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEE
Confidence            458888877665443211 1234 7889988888888877755 3488899877654433221       2356999999


Q ss_pred             CCCCCEEEEecCCeEEEEEccCCceEEEecc-------cCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeec
Q psy10867         87 SPDAAYIAVSIETKLHMWQISSGRLLATASS-------HYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAF  159 (343)
Q Consensus        87 s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~~-------~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~  159 (343)
                      .++|.+.+++.+ .|.+|+..+++.......       ....|.++...++|. |..|+.++-|..++..+.........
T Consensus       271 d~~g~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~  348 (795)
T 4a2l_A          271 DSQNRLWIGTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGG-MWLGTYFGGLNYYHPIRNRFKNIRNI  348 (795)
T ss_dssp             CTTSCEEEEESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSC-EEEEESSSCEEEECGGGGSSEEECCC
T ss_pred             cCCCCEEEEeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcC-EEEEECCCCeEEeCCCcccceEEcCC
Confidence            999988887655 688999877654433211       235799999988876 55667777799998765432111000


Q ss_pred             CCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee---------cCCcEE
Q psy10867        160 GIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI---------LDTRLT  230 (343)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~---------~~~~i~  230 (343)
                                     .. ...-....|.++...+++   .|..|+.++-|..||..+++......         ....|.
T Consensus       349 ---------------~~-~~~l~~~~V~~i~~d~~g---~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~  409 (795)
T 4a2l_A          349 ---------------PY-KNSLSDNVVSCIVEDKDK---NLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIK  409 (795)
T ss_dssp             ---------------TT-SSSCSCSSEEEEEECTTS---CEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEE
T ss_pred             ---------------CC-CCCCCCCeeEEEEECCCC---CEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEE
Confidence                           00 000124568899888877   36667788789999987765433221         135689


Q ss_pred             EEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEeccc
Q psy10867        231 CVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTIS  310 (343)
Q Consensus       231 ~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~  310 (343)
                      +++..++++.|.+|+.++-|.++|..+..... +..  ..  .  ......|.++...++|++.+.. .+ -|.+||..+
T Consensus       410 ~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~-~~~--~~--~--~l~~~~v~~i~~d~~g~lwigt-~~-Gl~~~~~~~  480 (795)
T 4a2l_A          410 AVYVDEKKSLVYIGTHAGGLSILHRNSGQVEN-FNQ--RN--S--QLVNENVYAILPDGEGNLWLGT-LS-ALVRFNPEQ  480 (795)
T ss_dssp             EEEEETTTTEEEEEETTTEEEEEETTTCCEEE-ECT--TT--S--CCSCSCEEEEEECSSSCEEEEE-SS-CEEEEETTT
T ss_pred             EEEEcCCCCEEEEEeCcCceeEEeCCCCcEEE-eec--CC--C--CcCCCeeEEEEECCCCCEEEEe-cC-ceeEEeCCC
Confidence            99999988867778877779999876543211 100  00  0  0234578999988888755544 44 588999877


Q ss_pred             ceeeeecc-------cCCceEEEEEccCCCeeeec
Q psy10867        311 RQCLRTIQ-------HKGPVLGAFLGLLPPAIHDY  338 (343)
Q Consensus       311 ~~~~~~~~-------~~~~v~~~~~sp~~~~l~~~  338 (343)
                      ++......       ....|.++...++|+..+..
T Consensus       481 ~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt  515 (795)
T 4a2l_A          481 RSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGG  515 (795)
T ss_dssp             TEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEE
T ss_pred             CeEEEccccccccccCCceEEEEEECCCCCEEEEe
Confidence            65433221       23568899999888776543

>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1

Probab=99.40  E-value=3.5e-09  Score=83.37  Aligned_cols=248  Identities=8%  Similarity=-0.038  Sum_probs=149.6

Q ss_pred             EEEecCCCCeEEEEecCCceE-----EEEEecCCCCcceEEEEeCC-ceEEEEEcCCCeEEEEeCCCcccceecccCCcc
Q psy10867          7 VAFSYDGSGAISVWEPKGGTL-----LMSYKGASVLSPHSMCLLGN-DYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGR   80 (343)
Q Consensus         7 ~~~s~~~dg~i~iwd~~~~~~-----~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~   80 (343)
                      +.|+..  +.|+.+++.....     ...+..... .+..++++++ +.++++....+.|..++..+.............
T Consensus         4 l~~~~~--~~I~~~~~~g~~~~~~~~~~~~~~~~~-~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~   80 (267)
T 1npe_A            4 LLFAQT--GKIERLPLERNTMKKTEAKAFLHIPAK-VIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGS   80 (267)
T ss_dssp             EEEEEE--EEEEEEEESSSCBCGGGCEEEEEEEEE-EEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCC
T ss_pred             EEEEcC--CeEEEEEecCcccccccceeeecCCCC-cEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCC
Confidence            445442  4788888865432     112222223 6789999985 577777766789999998876543333223356


Q ss_pred             eEEEEECCCCCEEE-E-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecC---CCeEEEeecCccceee
Q psy10867         81 ISSMQASPDAAYIA-V-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGE---DGTICVWQLSRLICKQ  155 (343)
Q Consensus        81 v~~~~~s~~~~~l~-~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~---dg~i~iwd~~~~~~~~  155 (343)
                      ...+++.|++..|. + ...+.|.+++++.................++++|++..|+.+..   .+.|..+++..... .
T Consensus        81 p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~-~  159 (267)
T 1npe_A           81 PEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNR-R  159 (267)
T ss_dssp             EEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCC-E
T ss_pred             ccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCc-E
Confidence            78999999765444 4 34679999998754333233222245789999996665554443   36788888764211 1


Q ss_pred             eeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCCcEEEEEEc
Q psy10867        156 TVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFD  235 (343)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~  235 (343)
                                         .+  ..........+++++++. .++++-...+.|.++|..................++..
T Consensus       160 -------------------~~--~~~~~~~P~gia~d~~~~-~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~P~gi~~d  217 (267)
T 1npe_A          160 -------------------IL--AQDNLGLPNGLTFDAFSS-QLCWVDAGTHRAECLNPAQPGRRKVLEGLQYPFAVTSY  217 (267)
T ss_dssp             -------------------EE--ECTTCSCEEEEEEETTTT-EEEEEETTTTEEEEEETTEEEEEEEEECCCSEEEEEEE
T ss_pred             -------------------EE--EECCCCCCcEEEEcCCCC-EEEEEECCCCEEEEEecCCCceEEEecCCCCceEEEEe
Confidence                               01  112234578899999763 55566667789999998755443333333345566664


Q ss_pred             CCCCEEEEE-cCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCC
Q psy10867        236 GTEDNIYMG-TSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGI  292 (343)
Q Consensus       236 ~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~  292 (343)
                        +..|+++ ..++.|.++|..+......+.          .+.......+++.|++.
T Consensus       218 --~~~lyva~~~~~~v~~~d~~~g~~~~~i~----------~g~~~~p~gi~~~~~~~  263 (267)
T 1npe_A          218 --GKNLYYTDWKTNSVIAMDLAISKEMDTFH----------PHKQTRLYGITIALSQC  263 (267)
T ss_dssp             --TTEEEEEETTTTEEEEEETTTTEEEEEEC----------CSSCCCCCCEEEECSCC
T ss_pred             --CCEEEEEECCCCeEEEEeCCCCCceEEEc----------cccccccceeeecCccC
Confidence              4555555 456899999987654332211          11112356677777753

>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A

Probab=99.40  E-value=2.1e-11  Score=103.71  Aligned_cols=275  Identities=10%  Similarity=-0.018  Sum_probs=167.7

Q ss_pred             CCCeEEEEecCCceEEEEEecCCCCcceEEEE-e-CCceEEEEEc------------------CCCeEEEEeCCCcccce
Q psy10867         13 GSGAISVWEPKGGTLLMSYKGASVLSPHSMCL-L-GNDYVLGVEK------------------GKPMIQAWPVNSQEKAQ   72 (343)
Q Consensus        13 ~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~-~-~~~~~~~~~~------------------~~~~i~iw~~~~~~~~~   72 (343)
                      .++.|.+-|+.+.+....+.-.....+..+++ + |++.++.++.                  .++.+.+.|.++.+...
T Consensus       110 ~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~  189 (595)
T 1fwx_A          110 ANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAW  189 (595)
T ss_dssp             TTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEE
T ss_pred             CCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEE
Confidence            36789999999999888665443226788888 4 8887777763                  33588999999887764


Q ss_pred             ecccCCcceEEEEECCCCCEEEE-ecCC---------------eEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEE
Q psy10867         73 LRLICPGRISSMQASPDAAYIAV-SIET---------------KLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVT  136 (343)
Q Consensus        73 ~~~~~~~~v~~~~~s~~~~~l~~-~~d~---------------~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s  136 (343)
                      ...... ....++++|+|+++.+ +.+.               .|.+.|....+               .+.++|+....
T Consensus       190 qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~---------------~~v~~Gk~~~i  253 (595)
T 1fwx_A          190 QVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIE---------------KAIAAGDYQEL  253 (595)
T ss_dssp             EEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHH---------------HHHHHTCSEEE
T ss_pred             EEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeecccee---------------EeccCCCeeEE
Confidence            443222 4567889999999887 3332               24444432221               12234444333


Q ss_pred             ecCCCeEEEeecCc--cce-eeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEe
Q psy10867        137 GGEDGTICVWQLSR--LIC-KQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFD  213 (343)
Q Consensus       137 ~~~dg~i~iwd~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd  213 (343)
                          +.|.+.|..+  +.. ...+.                       -.....++.++|+|. ..++++..+.++.++|
T Consensus       254 ----~~V~VID~~~~~~~~~~~~Ip-----------------------vg~~PhGv~~sPDGk-~v~V~~~~s~~VsVid  305 (595)
T 1fwx_A          254 ----NGVKVVDGRKEASSLFTRYIP-----------------------IANNPHGCNMAPDKK-HLCVAGKLSPTVTVLD  305 (595)
T ss_dssp             ----TTEEEEECSGGGCCSSEEEEE-----------------------EESSCCCEEECTTSS-EEEEECTTSSBEEEEE
T ss_pred             ----CcEEEEeCcccCCceeEEEEe-----------------------cCCCceEEEEcCCCC-EEEEeCCCCCeEEEEE
Confidence                4599999987  322 22221                       123556899999994 4555666789999999


Q ss_pred             cCCCc------------eEEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCc
Q psy10867        214 LCTGE------------DLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQ  281 (343)
Q Consensus       214 ~~~~~------------~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (343)
                      +.+.+            .............++|+|+|....+...|++|.+||+........-. .....+..+..|..+
T Consensus       306 ~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~-~~~~vi~kidV~yqp  384 (595)
T 1fwx_A          306 VTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGE-KVDPIKDKLDVHYQP  384 (595)
T ss_dssp             GGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTC-SCCCEEEEEECSSCE
T ss_pred             CcccccccccccCcccceEEEcCCCCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhccc-ccceeEEEeeccccc
Confidence            98663            34555567789999999999433445679999999988621100000 000112333333222


Q ss_pred             -----EEEEEEccCCCEEEEEeC---CCcE----------EEEeccccee--eeecccCCceEEEEEccCC
Q psy10867        282 -----VTSLSCSITGITLLSSSA---DETL----------KIWHTISRQC--LRTIQHKGPVLGAFLGLLP  332 (343)
Q Consensus       282 -----v~~~~~s~~~~~l~s~~~---dg~i----------~iwd~~~~~~--~~~~~~~~~v~~~~~sp~~  332 (343)
                           -..+.++|||++|+++..   |+.+          .++|+..++.  +...........+.+.|..
T Consensus       385 Gh~~~~~g~t~~~DGk~l~~~Nk~skdr~~~~gp~~~~~~ql~dis~~~m~lv~d~p~~~ePh~~~i~~~~  455 (595)
T 1fwx_A          385 GHLKTVMGETLDATNDWLVCLSKFSKDRFLNVGPLKPENDQLIDISGDKMVLVHDGPTFAEPHDAIAVHPS  455 (595)
T ss_dssp             EEEEETTTTSTTCCSSEEEEEESCCTTSSCCCCSSCCEEEEEEECSSSSCEEEEEEEESSCCCCEEEECTT
T ss_pred             ccceeccceEeCCCCCEEEEcCCCCccccccCCCCCCCcceEEEcCCCcEEEEEEEcCCCCCCceEEccHH
Confidence                 123356899999998753   4321          8899965542  2222233344445555544

>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}

Probab=99.39  E-value=1e-10  Score=95.18  Aligned_cols=215  Identities=13%  Similarity=0.046  Sum_probs=149.2

Q ss_pred             EEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEE
Q psy10867          7 VAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQA   86 (343)
Q Consensus         7 ~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~   86 (343)
                      .++.++.++.|..+|.. ++....+..+.. .+.++...+++.+.++..+ +.|..+|.. ++...........+.++..
T Consensus       109 ~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~-~~~~~~~~~~g~l~vgt~~-~~l~~~d~~-g~~~~~~~~~~~~~~~~~~  184 (330)
T 3hxj_A          109 ILYVTSMDGHLYAINTD-GTEKWRFKTKKA-IYATPIVSEDGTIYVGSND-NYLYAINPD-GTEKWRFKTNDAITSAASI  184 (330)
T ss_dssp             EEEEECTTSEEEEECTT-SCEEEEEECSSC-CCSCCEECTTSCEEEECTT-SEEEEECTT-SCEEEEEECSSCCCSCCEE
T ss_pred             EEEEEecCCEEEEEcCC-CCEEEEEcCCCc-eeeeeEEcCCCEEEEEcCC-CEEEEECCC-CCEeEEEecCCCceeeeEE
Confidence            45556667889999988 888777776665 6778888888887776554 889999988 6655444444456677778


Q ss_pred             CCCCCEEEEecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCC
Q psy10867         87 SPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSG  166 (343)
Q Consensus        87 s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~  166 (343)
                      .+++.+.+++  +.|..+| .+++.+.........+.++...+++. +..++.++.+..+|... ......         
T Consensus       185 d~~g~l~v~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~~g-~~~~~~---------  250 (330)
T 3hxj_A          185 GKDGTIYFGS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAINPDG-TEKWRF---------  250 (330)
T ss_dssp             CTTCCEEEES--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSC-EEEEETTTEEEEECTTS-CEEEEE---------
T ss_pred             cCCCEEEEEe--CEEEEEC-CCCcEEEEEccCCcceeceEECCCCe-EEEEcCCCeEEEECCCC-CEeEEe---------
Confidence            7788877777  8899999 77877777666666788888887765 55566678888887533 222221         


Q ss_pred             CccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeec-CCcEEEEEEcCCCCEEEEEc
Q psy10867        167 KGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLIL-DTRLTCVAFDGTEDNIYMGT  245 (343)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~  245 (343)
                                   ......+..+.+.+++   .|..++.+|.+..+|. +++.+..+.. ...+.++...+++. |++++
T Consensus       251 -------------~~~~~~~~~~~~~~~g---~l~v~t~~ggl~~~d~-~g~~~~~~~~~~~~~~~~~~d~~g~-l~~gt  312 (330)
T 3hxj_A          251 -------------KTGKRIESSPVIGNTD---TIYFGSYDGHLYAINP-DGTEKWNFETGSWIIATPVIDENGT-IYFGT  312 (330)
T ss_dssp             -------------ECSSCCCSCCEECTTS---CEEEECTTCEEEEECT-TSCEEEEEECSSCCCSCCEECTTCC-EEEEC
T ss_pred             -------------eCCCCccccceEcCCC---eEEEecCCCCEEEECC-CCcEEEEEEcCCccccceEEcCCCE-EEEEc
Confidence                         1122223334455454   5777888889999995 7777776664 34466777777765 66788


Q ss_pred             CCCcEEEEEeec
Q psy10867        246 SEGVIKSFCLRQ  257 (343)
Q Consensus       246 ~d~~i~i~d~~~  257 (343)
                      .+|.+++.....
T Consensus       313 ~~G~~~~~~~~~  324 (330)
T 3hxj_A          313 RNGKFYALFNLE  324 (330)
T ss_dssp             TTSCEEEEEC--
T ss_pred             CCCeEEEEeccc
Confidence            999999887654

>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*

Probab=99.39  E-value=5e-10  Score=97.57  Aligned_cols=305  Identities=11%  Similarity=0.023  Sum_probs=178.3

Q ss_pred             ceEEEecCC-CCeEEEEec-CCceEEEEEecCCCC----------cceEEEEeC-Cce---EEEEEcCCCeEEEEeCCCc
Q psy10867          5 NEVAFSYDG-SGAISVWEP-KGGTLLMSYKGASVL----------SPHSMCLLG-NDY---VLGVEKGKPMIQAWPVNSQ   68 (343)
Q Consensus         5 ~~~~~s~~~-dg~i~iwd~-~~~~~~~~~~~~~~~----------~v~~~~~~~-~~~---~~~~~~~~~~i~iw~~~~~   68 (343)
                      ...+|..+. ++.|.-+|. .+|+.+.+++.....          ....++++| ++.   .+..+..++.+.-+|..++
T Consensus        62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG  141 (599)
T 1w6s_A           62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETG  141 (599)
T ss_dssp             TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTC
T ss_pred             CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCC
Confidence            455677777 889999999 899999888764321          113456654 333   1444555599999999999


Q ss_pred             ccceecccCC----cceEE-EEECCCCCEEEEe------cCCeEEEEEccCCceEEEecccCCC----------------
Q psy10867         69 EKAQLRLICP----GRISS-MQASPDAAYIAVS------IETKLHMWQISSGRLLATASSHYQP----------------  121 (343)
Q Consensus        69 ~~~~~~~~~~----~~v~~-~~~s~~~~~l~~~------~d~~i~v~~~~~~~~~~~~~~~~~~----------------  121 (343)
                      +.+.......    ..+.+ ... .++.+++.+      .++.|+.+|.++|+.+-.+......                
T Consensus       142 ~~~W~~~~~~~~~~~~~~ssP~v-~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~  220 (599)
T 1w6s_A          142 ETVWKVENSDIKVGSTLTIAPYV-VKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHY  220 (599)
T ss_dssp             CEEEEEECCCGGGTCBCCSCCEE-ETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGG
T ss_pred             CEEEeecCCCCCccceeecCCEE-ECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCccccccccccccccccc
Confidence            8773322111    01111 011 155555543      2789999999999988766432110                


Q ss_pred             ---------------------e-EEEEEecCCCEEEEecCC----------------CeEEEeecCccceeeeeecCCCC
Q psy10867        122 ---------------------I-TIVKWSADSNFIVTGGED----------------GTICVWQLSRLICKQTVAFGIPG  163 (343)
Q Consensus       122 ---------------------v-~~~~~~~~~~~l~s~~~d----------------g~i~iwd~~~~~~~~~~~~~~~~  163 (343)
                                           + ..+++.++...++.+..+                +.|..+|.++++....++.....
T Consensus       221 g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d  300 (599)
T 1w6s_A          221 GQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHD  300 (599)
T ss_dssp             CCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTC
T ss_pred             cccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCc
Confidence                                 0 134566677777777654                37999999998877665421000


Q ss_pred             CCCCccccccceeeeecccccceEEEEee-cCCCc-eEEEEeeCCCeEEEEecCCCceEEEeecCC--------------
Q psy10867        164 SSGKGVTGLTEPLHVKSQHSLPVTHVTLS-KLGAK-SRVASVSHDRTCKIFDLCTGEDLLSLILDT--------------  227 (343)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~-~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~--------------  227 (343)
                      .            ..+.....++. +... .+++. ..++.++.+|.++++|.++++.+.......              
T Consensus       301 ~------------wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~  367 (599)
T 1w6s_A          301 E------------WDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQ  367 (599)
T ss_dssp             S------------SCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCC
T ss_pred             c------------ccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCcccccccccCCCc
Confidence            0            00001111221 2221 23311 356778899999999999999987765221              


Q ss_pred             cE--------------------------EEEEEcCCCCEEEEEcCC----------------------------------
Q psy10867        228 RL--------------------------TCVAFDGTEDNIYMGTSE----------------------------------  247 (343)
Q Consensus       228 ~i--------------------------~~~~~~~~~~~l~~~~~d----------------------------------  247 (343)
                      ++                          ..++++|+..++++...+                                  
T Consensus       368 p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~  447 (599)
T 1w6s_A          368 PVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQ  447 (599)
T ss_dssp             EEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTT
T ss_pred             eeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceeccCCcCCcc
Confidence            11                          246778887777665322                                  


Q ss_pred             -----CcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecccCCc
Q psy10867        248 -----GVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQHKGP  322 (343)
Q Consensus       248 -----~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~  322 (343)
                           |.|..||+.+.+......            +..+...-.+...+.+++.++.|+.|+.||.++|+.+.+++....
T Consensus       448 ~~~~~G~l~A~D~~tG~~~W~~~------------~~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g  515 (599)
T 1w6s_A          448 NYEGLGQIKAYNAITGDYKWEKM------------ERFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSG  515 (599)
T ss_dssp             TTBCCEEEEEECTTTCCEEEEEE------------ESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSC
T ss_pred             cCCCcCeEEEEECCCCCEEeEec------------CCCCccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEeeCCCC
Confidence                 344444444433222111            000111111122466778899999999999999999999872222


Q ss_pred             --eEEEEEccCCCee
Q psy10867        323 --VLGAFLGLLPPAI  335 (343)
Q Consensus       323 --v~~~~~sp~~~~l  335 (343)
                        ..-+.+..+|+..
T Consensus       516 ~~~~P~~y~~~G~qy  530 (599)
T 1w6s_A          516 AIGYPMTYTHKGTQY  530 (599)
T ss_dssp             CCSCCEEEEETTEEE
T ss_pred             cEeccEEEEeCCEEE
Confidence              2235666777643

>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*

Probab=99.38  E-value=5.2e-08  Score=88.93  Aligned_cols=289  Identities=9%  Similarity=-0.004  Sum_probs=184.8

Q ss_pred             eEEEEecCCceEEEEEec-------CCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecc------cCCcceE
Q psy10867         16 AISVWEPKGGTLLMSYKG-------ASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRL------ICPGRIS   82 (343)
Q Consensus        16 ~i~iwd~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~------~~~~~v~   82 (343)
                      -|.+||..+++.......       ... .|.++...++|.+-++... +-|..|+..+........      -....|.
T Consensus       283 Gl~~~~~~~~~~~~~~~~~~~~~~l~~~-~i~~i~~D~~g~lWigt~~-~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~  360 (795)
T 4a2l_A          283 DLNIYHEGTDSFASYSSNPVENGSLSQR-SVRSIFMDSQGGMWLGTYF-GGLNYYHPIRNRFKNIRNIPYKNSLSDNVVS  360 (795)
T ss_dssp             CEEEEETTTTEEEEECCCTTSTTSCSSS-CEEEEEECTTSCEEEEESS-SCEEEECGGGGSSEEECCCTTSSSCSCSSEE
T ss_pred             hhheEcCCCCeEEEEecCCCCCCCCCCC-cEEEEEEeCCcCEEEEECC-CCeEEeCCCcccceEEcCCCCCCCCCCCeeE
Confidence            477888877664433211       123 7899999999988877765 668888876654332211      1235699


Q ss_pred             EEEECCCCCEEEEecCCeEEEEEccCCceEEEecc--------cCCCeEEEEEecCCCEEEEecCCCeEEEeecCcccee
Q psy10867         83 SMQASPDAAYIAVSIETKLHMWQISSGRLLATASS--------HYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICK  154 (343)
Q Consensus        83 ~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~~--------~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~  154 (343)
                      ++...++|.+.+++.++.|..|+..+++.......        ....|.++...++++.|..|+.++-|..+|..++...
T Consensus       361 ~i~~d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~  440 (795)
T 4a2l_A          361 CIVEDKDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVE  440 (795)
T ss_dssp             EEEECTTSCEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEE
T ss_pred             EEEECCCCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEE
Confidence            99999999988888887899999887765433211        2357899998888875667777778999998876432


Q ss_pred             eeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-------cCC
Q psy10867        155 QTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-------LDT  227 (343)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-------~~~  227 (343)
                      ....                .  ........|.++...+++  .+. .|+. +-+.+||..+++......       ...
T Consensus       441 ~~~~----------------~--~~~l~~~~v~~i~~d~~g--~lw-igt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~  498 (795)
T 4a2l_A          441 NFNQ----------------R--NSQLVNENVYAILPDGEG--NLW-LGTL-SALVRFNPEQRSFTTIEKEKDGTPVVSK  498 (795)
T ss_dssp             EECT----------------T--TSCCSCSCEEEEEECSSS--CEE-EEES-SCEEEEETTTTEEEECCBCTTCCBCCCC
T ss_pred             Eeec----------------C--CCCcCCCeeEEEEECCCC--CEE-EEec-CceeEEeCCCCeEEEccccccccccCCc
Confidence            2100                0  000134578888888877  444 4444 458889987765432211       125


Q ss_pred             cEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEe
Q psy10867        228 RLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWH  307 (343)
Q Consensus       228 ~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd  307 (343)
                      .|.++...+++...+.. . +-+..||..+...  .+..  ..  .........|.++...++|++.++. .. -|..||
T Consensus       499 ~i~~i~~d~~g~lWigt-~-~Gl~~~~~~~~~~--~~~~--~~--~~~~l~~~~i~~i~~d~~g~lWigT-~~-Gl~~~d  568 (795)
T 4a2l_A          499 QITTLFRDSHKRLWIGG-E-EGLSVFKQEGLDI--QKAS--IL--PVSNVTKLFTNCIYEASNGIIWVGT-RE-GFYCFN  568 (795)
T ss_dssp             CEEEEEECTTCCEEEEE-S-SCEEEEEEETTEE--EECC--CS--CSCGGGGSCEEEEEECTTSCEEEEE-SS-CEEEEE
T ss_pred             eEEEEEECCCCCEEEEe-C-CceEEEeCCCCeE--EEec--CC--CCCCCCCCeeEEEEECCCCCEEEEe-CC-CceeEC
Confidence            68999999988766554 4 5588888765432  1100  00  0011235679999999988865544 34 588899


Q ss_pred             cccceeeeecc----cCCceEEEEEccCCCeeeec
Q psy10867        308 TISRQCLRTIQ----HKGPVLGAFLGLLPPAIHDY  338 (343)
Q Consensus       308 ~~~~~~~~~~~----~~~~v~~~~~sp~~~~l~~~  338 (343)
                      ..+++....-.    ....|.++...++|+..+++
T Consensus       569 ~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lWi~t  603 (795)
T 4a2l_A          569 EKDKQIKRYNTTNGLPNNVVYGILEDSFGRLWLST  603 (795)
T ss_dssp             TTTTEEEEECGGGTCSCSCEEEEEECTTSCEEEEE
T ss_pred             CCCCcEEEeCCCCCCchhheEEEEECCCCCEEEEc
Confidence            87665433211    34568888888888876654

>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}

Probab=99.37  E-value=2.3e-09  Score=81.77  Aligned_cols=196  Identities=11%  Similarity=0.056  Sum_probs=132.4

Q ss_pred             eEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEEecCCeEEEEE
Q psy10867         26 TLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQ  105 (343)
Q Consensus        26 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~  105 (343)
                      +.+.++......-...+.|+. +.+..+...+|.|+.+|+++++.+.........-..+++..+.-+.++-.++.+.+||
T Consensus        44 ~Vv~~~phd~~~ftqGL~~~~-~~Ly~stG~~g~v~~iD~~Tgkv~~~~l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D  122 (268)
T 3nok_A           44 HIIREYPHATNAFTQGLVFHQ-GHFFESTGHQGTLRQLSLESAQPVWMERLGNIFAEGLASDGERLYQLTWTEGLLFTWS  122 (268)
T ss_dssp             EEEEEEECCTTCCEEEEEEET-TEEEEEETTTTEEEECCSSCSSCSEEEECTTCCEEEEEECSSCEEEEESSSCEEEEEE
T ss_pred             EEEEEEcCCCccccceEEEEC-CEEEEEcCCCCEEEEEECCCCcEEeEECCCCcceeEEEEeCCEEEEEEccCCEEEEEE
Confidence            456666544431347889985 5666666666899999999999886552211112345555333333345689999999


Q ss_pred             ccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccc
Q psy10867        106 ISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLP  185 (343)
Q Consensus       106 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (343)
                      .++.+.+.++..... -..++  ++++.|+.+..++.|.++|..+.+....+..                 ..-...-..
T Consensus       123 ~~Tl~~~~ti~~~~e-GwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V-----------------~~~g~~v~~  182 (268)
T 3nok_A          123 GMPPQRERTTRYSGE-GWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQV-----------------KLRGQPVEL  182 (268)
T ss_dssp             TTTTEEEEEEECSSC-CCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEEC-----------------EETTEECCC
T ss_pred             CCcCcEEEEEeCCCc-eeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEe-----------------CCCCccccc
Confidence            999999988874322 23444  5678777777789999999999877665531                 110111224


Q ss_pred             eEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecC--------------CcEEEEEEcCCCCEEEEEc
Q psy10867        186 VTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILD--------------TRLTCVAFDGTEDNIYMGT  245 (343)
Q Consensus       186 v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~--------------~~i~~~~~~~~~~~l~~~~  245 (343)
                      ++.+.|. ++  .+++....++.|.+.|.++++.+..+...              ...+.|+++|+++.|++.+
T Consensus       183 lNeLe~~-dG--~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG  253 (268)
T 3nok_A          183 INELECA-NG--VIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG  253 (268)
T ss_dssp             EEEEEEE-TT--EEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred             ccccEEe-CC--EEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence            5667776 55  66666667889999999999998887632              3578999999877666654

>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*

Probab=99.36  E-value=1.7e-10  Score=89.11  Aligned_cols=196  Identities=10%  Similarity=0.004  Sum_probs=132.8

Q ss_pred             ceEEEecccCC--CeEEEEEecCCCEEEEecC--CCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccc
Q psy10867        110 RLLATASSHYQ--PITIVKWSADSNFIVTGGE--DGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLP  185 (343)
Q Consensus       110 ~~~~~~~~~~~--~v~~~~~~~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (343)
                      +.+.++. |..  ....+.|+|++.++++.+.  ++.|.+.|+.+++....+..                    .. ...
T Consensus        10 ~vv~~~p-~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l--------------------~~-~~f   67 (266)
T 2iwa_A           10 EVLNEFP-HDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKM--------------------DD-SYF   67 (266)
T ss_dssp             EEEEEEE-CCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEEC--------------------CT-TCC
T ss_pred             eEEEEEE-CCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEec--------------------CC-Ccc
Confidence            3445553 443  3589999998765555543  57999999999877665431                    11 112


Q ss_pred             eEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecC-CcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccc
Q psy10867        186 VTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILD-TRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDH  264 (343)
Q Consensus       186 v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~-~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~  264 (343)
                      ...+++.  +. .+.++.-.++.+.++|..+.+.+.++... ..  ...++++++.++++..++.|.++|..+.+.....
T Consensus        68 geGi~~~--g~-~lyv~t~~~~~v~viD~~t~~v~~~i~~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I  142 (266)
T 2iwa_A           68 GEGLTLL--NE-KLYQVVWLKNIGFIYDRRTLSNIKNFTHQMKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKH  142 (266)
T ss_dssp             EEEEEEE--TT-EEEEEETTCSEEEEEETTTTEEEEEEECCSSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEE
T ss_pred             eEEEEEe--CC-EEEEEEecCCEEEEEECCCCcEEEEEECCCCC--eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEE
Confidence            2345554  32 56666667899999999999999988755 22  2445668888888878899999998876554432


Q ss_pred             cccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecccC--------------CceEEEEEcc
Q psy10867        265 HIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQHK--------------GPVLGAFLGL  330 (343)
Q Consensus       265 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~--------------~~v~~~~~sp  330 (343)
                      ...      .-...-..++.+.|. ++...+....++.|.+-|..+++.+..+...              .....++|+|
T Consensus       143 ~Vg------~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~  215 (266)
T 2iwa_A          143 NVK------YNGHRVIRLNELEYI-NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQ  215 (266)
T ss_dssp             ECE------ETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEET
T ss_pred             EEC------CCCcccccceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcC
Confidence            210      000011246778887 7766666656789999999999998888621              3568999999


Q ss_pred             CCCeeeecc
Q psy10867        331 LPPAIHDYD  339 (343)
Q Consensus       331 ~~~~l~~~~  339 (343)
                      +++.|++++
T Consensus       216 ~~~~lfVTg  224 (266)
T 2iwa_A          216 ENKRIFVTG  224 (266)
T ss_dssp             TTTEEEEEE
T ss_pred             CCCEEEEEC
Confidence            998776654

>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1

Probab=99.36  E-value=4.6e-10  Score=97.91  Aligned_cols=304  Identities=12%  Similarity=0.047  Sum_probs=174.3

Q ss_pred             eEEEecCCCCeEEEEecCCceEEEEEecCCCCcc--------eEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccC
Q psy10867          6 EVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSP--------HSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLIC   77 (343)
Q Consensus         6 ~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v--------~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~   77 (343)
                      ..+|.++.++.|.-+|..+|+.+.++........        ..+++. ++++++.. .++.|.-+|..+++.+......
T Consensus        69 g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~-~~~v~~~t-~dg~l~AlD~~TG~~~W~~~~~  146 (582)
T 1flg_A           69 GVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIY-GDKVFFGT-LDASVVALNKNTGKVVWKKKFA  146 (582)
T ss_dssp             TEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEE-TTEEEEEE-TTTEEEEEESSSCCEEEEEECS
T ss_pred             CEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEE-CCEEEEEe-CCCEEEEEECCCCCEEeeecCC
Confidence            3455555544599999999999998876542110        223332 45555544 4589999999999877333211


Q ss_pred             Cc----ceE-EEEECC---CCC-EEEEe-------cCCeEEEEEccCCceEEEecccCCCe-------------------
Q psy10867         78 PG----RIS-SMQASP---DAA-YIAVS-------IETKLHMWQISSGRLLATASSHYQPI-------------------  122 (343)
Q Consensus        78 ~~----~v~-~~~~s~---~~~-~l~~~-------~d~~i~v~~~~~~~~~~~~~~~~~~v-------------------  122 (343)
                      ..    .+. ......   +++ .++++       .++.|+-+|..+|+.+-........+                   
T Consensus       147 ~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w  226 (582)
T 1flg_A          147 DHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKAPSW  226 (582)
T ss_dssp             CGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSCTTCTTS
T ss_pred             CCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCCCccccccccCcccccccccccccC
Confidence            10    111 001111   232 44442       26899999999998876543211000                   


Q ss_pred             ----------------------EEEEEecCCCEEEEecC--------------------C----CeEEEeecCccceeee
Q psy10867        123 ----------------------TIVKWSADSNFIVTGGE--------------------D----GTICVWQLSRLICKQT  156 (343)
Q Consensus       123 ----------------------~~~~~~~~~~~l~s~~~--------------------d----g~i~iwd~~~~~~~~~  156 (343)
                                            ..+++.|+...++.+..                    |    +.|..+|..+++....
T Consensus       227 ~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~  306 (582)
T 1flg_A          227 PDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWF  306 (582)
T ss_dssp             CBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEE
T ss_pred             CCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEEE
Confidence                                  12456666666766552                    2    5899999999887776


Q ss_pred             eecCCCCCCCCccccccceeeeecccccceEEEEee-cCCCc-eEEEEeeCCCeEEEEecCCCceEEEeecCCc------
Q psy10867        157 VAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLS-KLGAK-SRVASVSHDRTCKIFDLCTGEDLLSLILDTR------  228 (343)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~-~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~------  228 (343)
                      ++......            ..+.....++. +... .+++. ..++.++.+|.++++|.++++.+..+.....      
T Consensus       307 ~q~~~~d~------------wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~  373 (582)
T 1flg_A          307 YQHTPNDA------------WDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASH  373 (582)
T ss_dssp             EESSTTCC------------SCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEE
T ss_pred             EeCCCCCc------------ccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCcccccc
Confidence            54210000            00001111221 1221 34411 2678889999999999999999877653220      


Q ss_pred             --------E--------------------------------EEEEEcCCCCEEEEEcC----------------------
Q psy10867        229 --------L--------------------------------TCVAFDGTEDNIYMGTS----------------------  246 (343)
Q Consensus       229 --------i--------------------------------~~~~~~~~~~~l~~~~~----------------------  246 (343)
                              +                                ..++++|+...+++...                      
T Consensus       374 ~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~  453 (582)
T 1flg_A          374 IDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGM  453 (582)
T ss_dssp             ECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCE
T ss_pred             ccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCceecc
Confidence                    0                                13466676666665432                      


Q ss_pred             -----------CCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeee
Q psy10867        247 -----------EGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLR  315 (343)
Q Consensus       247 -----------d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~  315 (343)
                                 +|.|..||+.+.+.......            ..++..-.....+.+++.++.||.++.||.++|+.+.
T Consensus       454 ~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~------------~~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW  521 (582)
T 1flg_A          454 GFRIKRMYDDHVGSLRAMDPVSGKVVWEHKE------------HLPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELW  521 (582)
T ss_dssp             EEEEEESCSSCSEEEEEECTTTCCEEEEEEE------------SSCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEE
T ss_pred             ceeecCCCCCCcceEEEEECCCCCEEEEecC------------CCCCcccceEeCCCEEEEECCCCcEEEEECCCCCEEE
Confidence                       45666677666544332210            0111111112245678889999999999999999999


Q ss_pred             ecccCCceE--EEEEccCCCeee
Q psy10867        316 TIQHKGPVL--GAFLGLLPPAIH  336 (343)
Q Consensus       316 ~~~~~~~v~--~~~~sp~~~~l~  336 (343)
                      +++....+.  -+.|..+|+..+
T Consensus       522 ~~~~~~g~~a~P~~y~~~G~qYv  544 (582)
T 1flg_A          522 KFQTGSGIVSPPITWEQDGEQYL  544 (582)
T ss_dssp             EEECSSCCCSCCEEEEETTEEEE
T ss_pred             EecCCCCcccCceEEEECCEEEE
Confidence            998444443  366777887444

>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A

Probab=99.36  E-value=1.8e-09  Score=82.43  Aligned_cols=193  Identities=12%  Similarity=0.085  Sum_probs=131.4

Q ss_pred             eEEEEEecCCCCcceEEEEeCCceEEEEEcCCC--eEEEEeCCCcccceecccCCcceE--EEEECCCCCEEEE--ecCC
Q psy10867         26 TLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKP--MIQAWPVNSQEKAQLRLICPGRIS--SMQASPDAAYIAV--SIET   99 (343)
Q Consensus        26 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~--~i~iw~~~~~~~~~~~~~~~~~v~--~~~~s~~~~~l~~--~~d~   99 (343)
                      +.++++......-...+.|+ ++.+..+.+.+|  .|+.+|+++++.+...... ....  .+++  ++..|..  -.++
T Consensus        32 ~vv~~~phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~-~~~FgeGit~--~g~~ly~ltw~~~  107 (262)
T 3nol_A           32 QIVHSYPHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELG-KRYFGEGISD--WKDKIVGLTWKNG  107 (262)
T ss_dssp             EEEEEEECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECC-TTCCEEEEEE--ETTEEEEEESSSS
T ss_pred             EEEEEecCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecC-CccceeEEEE--eCCEEEEEEeeCC
Confidence            45666754443234789998 566666655545  8999999999987655432 2332  3444  3444443  4688


Q ss_pred             eEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeee
Q psy10867        100 KLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVK  179 (343)
Q Consensus       100 ~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (343)
                      .+.+||.++.+.+.++.....   ...++++++.|+.+..++.|.++|..+.+....+..                 . .
T Consensus       108 ~v~v~D~~t~~~~~ti~~~~e---G~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V-----------------~-~  166 (262)
T 3nol_A          108 LGFVWNIRNLRQVRSFNYDGE---GWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITV-----------------T-A  166 (262)
T ss_dssp             EEEEEETTTCCEEEEEECSSC---CCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEEC-----------------E-E
T ss_pred             EEEEEECccCcEEEEEECCCC---ceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEe-----------------c-c
Confidence            999999999999988874322   223345777777776678899999999877665431                 1 1


Q ss_pred             cccc-cceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecC-------------CcEEEEEEcCCCCEEEEEc
Q psy10867        180 SQHS-LPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILD-------------TRLTCVAFDGTEDNIYMGT  245 (343)
Q Consensus       180 ~~~~-~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~-------------~~i~~~~~~~~~~~l~~~~  245 (343)
                      .+.. ..++.+.+. ++  .+.+..-.++.|.+.|.++++.+..+...             ...+.++|+|+++.|++.+
T Consensus       167 ~g~~~~~lNELe~~-~G--~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG  243 (262)
T 3nol_A          167 HGEELPELNELEWV-DG--EIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTG  243 (262)
T ss_dssp             TTEECCCEEEEEEE-TT--EEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred             CCccccccceeEEE-CC--EEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEEC
Confidence            1111 335567776 56  66666667889999999999998888742             2468999999988887766


Q ss_pred             C
Q psy10867        246 S  246 (343)
Q Consensus       246 ~  246 (343)
                      .
T Consensus       244 K  244 (262)
T 3nol_A          244 K  244 (262)
T ss_dssp             T
T ss_pred             C
Confidence            4

>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A

Probab=99.32  E-value=4.5e-10  Score=85.71  Aligned_cols=193  Identities=9%  Similarity=0.037  Sum_probs=129.4

Q ss_pred             eEEEecccCCC--eEEEEEecCCCEEEEecCCC--eEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccce
Q psy10867        111 LLATASSHYQP--ITIVKWSADSNFIVTGGEDG--TICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPV  186 (343)
Q Consensus       111 ~~~~~~~~~~~--v~~~~~~~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  186 (343)
                      .+.++ .|...  ...+.|+ ++.++.+.+.+|  .|+.+|+.+++....+.+                    . ....-
T Consensus        33 vv~~~-phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l--------------------~-~~~Fg   89 (262)
T 3nol_A           33 IVHSY-PHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIEL--------------------G-KRYFG   89 (262)
T ss_dssp             EEEEE-ECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEEC--------------------C-TTCCE
T ss_pred             EEEEe-cCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEec--------------------C-Cccce
Confidence            34555 34433  4789998 677777777766  899999999877665431                    1 11111


Q ss_pred             EEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccc
Q psy10867        187 THVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHI  266 (343)
Q Consensus       187 ~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~  266 (343)
                      ..+++.  ++ .+.+..-.++.+.+||..+.+.+.++.....-..++  ++++.|+.+..++.|.++|..+.+.......
T Consensus        90 eGit~~--g~-~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~eG~glt--~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V  164 (262)
T 3nol_A           90 EGISDW--KD-KIVGLTWKNGLGFVWNIRNLRQVRSFNYDGEGWGLT--HNDQYLIMSDGTPVLRFLDPESLTPVRTITV  164 (262)
T ss_dssp             EEEEEE--TT-EEEEEESSSSEEEEEETTTCCEEEEEECSSCCCCEE--ECSSCEEECCSSSEEEEECTTTCSEEEEEEC
T ss_pred             eEEEEe--CC-EEEEEEeeCCEEEEEECccCcEEEEEECCCCceEEe--cCCCEEEEECCCCeEEEEcCCCCeEEEEEEe
Confidence            224443  32 455556678999999999999999998654333343  5678888877788899999887665443321


Q ss_pred             cCCCCCCcccccc-CcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeeccc-------------CCceEEEEEccCC
Q psy10867        267 QDSTSNPDFIGHE-KQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQH-------------KGPVLGAFLGLLP  332 (343)
Q Consensus       267 ~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-------------~~~v~~~~~sp~~  332 (343)
                      .       ..+.. ..++.+.|. +|+..+..-.++.|.+.|..+|+.+..+..             ..-.+.++|+|++
T Consensus       165 ~-------~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~  236 (262)
T 3nol_A          165 T-------AHGEELPELNELEWV-DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEH  236 (262)
T ss_dssp             E-------ETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTT
T ss_pred             c-------cCCccccccceeEEE-CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCC
Confidence            0       01111 335567776 777666665688999999999999888762             1345899999988


Q ss_pred             Ceeeecc
Q psy10867        333 PAIHDYD  339 (343)
Q Consensus       333 ~~l~~~~  339 (343)
                      +.|++.+
T Consensus       237 ~~lfVTG  243 (262)
T 3nol_A          237 HRLFVTG  243 (262)
T ss_dssp             TEEEEEE
T ss_pred             CEEEEEC
Confidence            7776543

>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*

Probab=99.28  E-value=7.9e-09  Score=83.71  Aligned_cols=238  Identities=8%  Similarity=-0.049  Sum_probs=143.5

Q ss_pred             cceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecc-------------------cCCcceEEEEECC-CCCEEEEec
Q psy10867         38 SPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRL-------------------ICPGRISSMQASP-DAAYIAVSI   97 (343)
Q Consensus        38 ~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~-------------------~~~~~v~~~~~s~-~~~~l~~~~   97 (343)
                      ...++++.+++.++.++..++.|..|+..+++......                   .....+..+++.+ +++++++..
T Consensus        20 ~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~   99 (322)
T 2fp8_A           20 APNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDC   99 (322)
T ss_dssp             CCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEET
T ss_pred             CceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEEC
Confidence            56789999999866666666899999887654332110                   0113578899997 777777766


Q ss_pred             CCeEEEEEccCCceEEEec---c-cCCCeEEEEEec-CCCEEEEecC-----------------CCeEEEeecCccceee
Q psy10867         98 ETKLHMWQISSGRLLATAS---S-HYQPITIVKWSA-DSNFIVTGGE-----------------DGTICVWQLSRLICKQ  155 (343)
Q Consensus        98 d~~i~v~~~~~~~~~~~~~---~-~~~~v~~~~~~~-~~~~l~s~~~-----------------dg~i~iwd~~~~~~~~  155 (343)
                      .+.|..+|..++.......   + .......+++.+ +|+..++-..                 ++.|..+|..++....
T Consensus       100 ~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~  179 (322)
T 2fp8_A          100 YYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTL  179 (322)
T ss_dssp             TTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEE
T ss_pred             CCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEE
Confidence            6668888876553322111   1 123467899999 8887666432                 3678888876543211


Q ss_pred             eeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceE-EEEeeCCCeEEEEecCCCc--eEEEe-ecCCcEEE
Q psy10867        156 TVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSR-VASVSHDRTCKIFDLCTGE--DLLSL-ILDTRLTC  231 (343)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-l~~~~~d~~i~~wd~~~~~--~~~~~-~~~~~i~~  231 (343)
                                             +.........++++|++  +. +++-+..+.|..|++....  ....+ .... ...
T Consensus       180 -----------------------~~~~~~~p~gia~~~dg--~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~g  233 (322)
T 2fp8_A          180 -----------------------LLKELHVPGGAEVSADS--SFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGN  233 (322)
T ss_dssp             -----------------------EEEEESCCCEEEECTTS--SEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEE
T ss_pred             -----------------------eccCCccCcceEECCCC--CEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCC
Confidence                                   11112345679999998  54 4454667899999987521  11222 2333 788


Q ss_pred             EEEcCCCCEEEEEcC----------CCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCC
Q psy10867        232 VAFDGTEDNIYMGTS----------EGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADE  301 (343)
Q Consensus       232 ~~~~~~~~~l~~~~~----------d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg  301 (343)
                      ++++++|++.++...          .+.|..+|.. ......+....+.       .-..++.+++ .+++++++...++
T Consensus       234 i~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~-------~~~~~~~~~~-~~g~L~v~~~~~~  304 (322)
T 2fp8_A          234 IKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEF-GNILEVIPLPPPF-------AGEHFEQIQE-HDGLLYIGTLFHG  304 (322)
T ss_dssp             EEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTT-SCEEEEEECCTTT-------TTSCCCEEEE-ETTEEEEECSSCS
T ss_pred             eEECCCCCEEEEecCcccccccCCCccEEEEECCC-CCEEEEEECCCCC-------ccccceEEEE-eCCEEEEeecCCC
Confidence            999999986665543          3567777653 2211111110000       0234566666 4666666666778


Q ss_pred             cEEEEeccc
Q psy10867        302 TLKIWHTIS  310 (343)
Q Consensus       302 ~i~iwd~~~  310 (343)
                      .|..+++..
T Consensus       305 ~i~~~~~~~  313 (322)
T 2fp8_A          305 SVGILVYDK  313 (322)
T ss_dssp             EEEEEEC--
T ss_pred             ceEEEeccc
Confidence            898888753

>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3

Probab=99.28  E-value=4.6e-08  Score=78.54  Aligned_cols=249  Identities=7%  Similarity=0.005  Sum_probs=148.1

Q ss_pred             CceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEEec--CC-e
Q psy10867         24 GGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSI--ET-K  100 (343)
Q Consensus        24 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--d~-~  100 (343)
                      ..+.+..+... . ....+++++++.++++...++.|..||..... .... ........+++.++|+++++..  ++ .
T Consensus        21 ~~~~~~~~p~~-~-~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~-~~~~-~~~~~p~gia~~~dG~l~vad~~~~~~~   96 (306)
T 2p4o_A           21 PAKIITSFPVN-T-FLENLASAPDGTIFVTNHEVGEIVSITPDGNQ-QIHA-TVEGKVSGLAFTSNGDLVATGWNADSIP   96 (306)
T ss_dssp             CEEEEEEECTT-C-CEEEEEECTTSCEEEEETTTTEEEEECTTCCE-EEEE-ECSSEEEEEEECTTSCEEEEEECTTSCE
T ss_pred             CceEeEeCCCC-C-CcceEEECCCCCEEEEeCCCCeEEEECCCCce-EEEE-eCCCCceeEEEcCCCcEEEEeccCCcce
Confidence            35566666554 3 67899999999988887677899999987643 2222 2345788999999999877742  22 5


Q ss_pred             EEEEEccCCceEEEecc-cCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeee
Q psy10867        101 LHMWQISSGRLLATASS-HYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVK  179 (343)
Q Consensus       101 i~v~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (343)
                      |..++..+++....... .......++..+++..+++-..++.|..+|...+.......... .          .. ...
T Consensus        97 v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~-~----------~~-~~~  164 (306)
T 2p4o_A           97 VVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPM-L----------AR-SNS  164 (306)
T ss_dssp             EEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGG-G----------SC-SST
T ss_pred             EEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCc-c----------cc-ccc
Confidence            77778777775433221 12233455555555555555568889888876532110000000 0          00 000


Q ss_pred             cccccceEEEEeecCCCceEEEEeeCCCeEEEEecCC-Cce--EEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEee
Q psy10867        180 SQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCT-GED--LLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLR  256 (343)
Q Consensus       180 ~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~-~~~--~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~  256 (343)
                      .........+  ++++. .++++-+..+.|..+++.. ++.  ...+........++++++|+++++....+.|.++|..
T Consensus       165 ~~~~~~pngi--s~dg~-~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~  241 (306)
T 2p4o_A          165 ESVFPAANGL--KRFGN-FLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPD  241 (306)
T ss_dssp             TCCSCSEEEE--EEETT-EEEEEETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECBTTCCEEEECTT
T ss_pred             cCCCCcCCCc--CcCCC-EEEEEeCCCCEEEEEEeCCCCCCCccEEEeccCCCCCeEECCCCCEEEEeCCCCeEEEECCC
Confidence            0111234445  77763 4566666788999999874 321  1222222345678999999877776668899999864


Q ss_pred             cccccccccccCCCCCCccccccCcEEEEEEc---cCCCEEEEEeCCC
Q psy10867        257 QVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCS---ITGITLLSSSADE  301 (343)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s---~~~~~l~s~~~dg  301 (343)
                      . ....         +..+......+++++|.   |+++.|+.++..+
T Consensus       242 G-~~~~---------~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~~~  279 (306)
T 2p4o_A          242 R-STTI---------IAQAEQGVIGSTAVAFGQTEGDCTAIYVVTNGG  279 (306)
T ss_dssp             C-CEEE---------EECGGGTCTTEEEEEECCSTTTTTEEEEEECTT
T ss_pred             C-CEEE---------EeecccccCCceEEEEecccCCCCEEEEECCCC
Confidence            2 1100         00112223568899998   8877776655443

>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}

Probab=99.26  E-value=2.2e-09  Score=81.93  Aligned_cols=193  Identities=7%  Similarity=-0.027  Sum_probs=130.0

Q ss_pred             ceEEEecccCC--CeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceE
Q psy10867        110 RLLATASSHYQ--PITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVT  187 (343)
Q Consensus       110 ~~~~~~~~~~~--~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  187 (343)
                      +.+.++ .|..  ....+.|+ ++.++.+.+.+|.|+.+|+.+++....+                     +.. ...-.
T Consensus        44 ~Vv~~~-phd~~~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~---------------------l~~-~~Fge   99 (268)
T 3nok_A           44 HIIREY-PHATNAFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME---------------------RLG-NIFAE   99 (268)
T ss_dssp             EEEEEE-ECCTTCCEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE---------------------ECT-TCCEE
T ss_pred             EEEEEE-cCCCccccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE---------------------CCC-Cccee
Confidence            344455 3433  34788887 4677788888999999999998765432                     111 11112


Q ss_pred             EEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeeccccccccccc
Q psy10867        188 HVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQ  267 (343)
Q Consensus       188 ~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~  267 (343)
                      .+++.  ++ .+.+..-.++.+.+||..+.+.+.++.....-..++  ++++.|+.+..++.|.++|..+.+........
T Consensus       100 Git~~--g~-~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~  174 (268)
T 3nok_A          100 GLASD--GE-RLYQLTWTEGLLFTWSGMPPQRERTTRYSGEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVK  174 (268)
T ss_dssp             EEEEC--SS-CEEEEESSSCEEEEEETTTTEEEEEEECSSCCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECE
T ss_pred             EEEEe--CC-EEEEEEccCCEEEEEECCcCcEEEEEeCCCceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeC
Confidence            34443  32 456666678999999999999999998655444444  56888888888999999998886654433211


Q ss_pred             CCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecccC--------------CceEEEEEccCCC
Q psy10867        268 DSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQHK--------------GPVLGAFLGLLPP  333 (343)
Q Consensus       268 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~--------------~~v~~~~~sp~~~  333 (343)
                            .-...-..++.+.|. +|+..+..-.+..|.+.|..+|+.+..+...              .-.+.++|+|+++
T Consensus       175 ------~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~  247 (268)
T 3nok_A          175 ------LRGQPVELINELECA-NGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSG  247 (268)
T ss_dssp             ------ETTEECCCEEEEEEE-TTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTC
T ss_pred             ------CCCcccccccccEEe-CCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCC
Confidence                  000011245667776 7766655556789999999999998887611              3568999999876


Q ss_pred             eeeec
Q psy10867        334 AIHDY  338 (343)
Q Consensus       334 ~l~~~  338 (343)
                      .|++.
T Consensus       248 rlfVT  252 (268)
T 3nok_A          248 RIFMT  252 (268)
T ss_dssp             CEEEE
T ss_pred             EEEEe
Confidence            66543

>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}

Probab=99.25  E-value=5.2e-08  Score=73.77  Aligned_cols=196  Identities=10%  Similarity=0.053  Sum_probs=129.8

Q ss_pred             ceEEEEEecCCCCcceEEEEeCCceEEEEEcCC--CeEEEEeCCCcccceecccCCc-ceEEEEECCCCCEEE--EecCC
Q psy10867         25 GTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGK--PMIQAWPVNSQEKAQLRLICPG-RISSMQASPDAAYIA--VSIET   99 (343)
Q Consensus        25 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~i~iw~~~~~~~~~~~~~~~~-~v~~~~~s~~~~~l~--~~~d~   99 (343)
                      -+.+.++......-...+.|++ +.+..+....  ..|+.+|+.+++.+........ .-..+++.  +..|.  +-.++
T Consensus         9 ~~v~~~~phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~--~~~ly~ltw~~~   85 (243)
T 3mbr_X            9 YRVVKRYPHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW--RDRLIQLTWRNH   85 (243)
T ss_dssp             EEEEEEEECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSS
T ss_pred             eEEEEEcCCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe--CCEEEEEEeeCC
Confidence            3566777544432566899987 5555555443  4899999999998765532221 11234443  33333  34689


Q ss_pred             eEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeee
Q psy10867        100 KLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVK  179 (343)
Q Consensus       100 ~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (343)
                      .+.+||.++.+.+.++...... ..++  ++++.|+.+..++.|.++|..+.+....+...                 .-
T Consensus        86 ~v~v~D~~tl~~~~ti~~~~~G-wglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~-----------------~~  145 (243)
T 3mbr_X           86 EGFVYDLATLTPRARFRYPGEG-WALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVT-----------------AG  145 (243)
T ss_dssp             EEEEEETTTTEEEEEEECSSCC-CEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECE-----------------ET
T ss_pred             EEEEEECCcCcEEEEEeCCCCc-eEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEc-----------------cC
Confidence            9999999999999888743322 3444  56776776667889999999998776655311                 10


Q ss_pred             cccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecC--------------CcEEEEEEcCCCCEEEEEc
Q psy10867        180 SQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILD--------------TRLTCVAFDGTEDNIYMGT  245 (343)
Q Consensus       180 ~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~--------------~~i~~~~~~~~~~~l~~~~  245 (343)
                      ...-..++.+.+. ++  .+++..-.+..|.+.|.++++.+..+...              ...+.|+++|+++.|++.+
T Consensus       146 g~~~~~lNeLe~~-~G--~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG  222 (243)
T 3mbr_X          146 GRPLDNLNELEWV-NG--ELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG  222 (243)
T ss_dssp             TEECCCEEEEEEE-TT--EEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred             CcccccceeeEEe-CC--EEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence            0011344566655 55  56666656889999999999998887621              2468999999888777765


Q ss_pred             C
Q psy10867        246 S  246 (343)
Q Consensus       246 ~  246 (343)
                      .
T Consensus       223 K  223 (243)
T 3mbr_X          223 K  223 (243)
T ss_dssp             T
T ss_pred             C
Confidence            3

>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}

Probab=99.25  E-value=3.4e-07  Score=83.43  Aligned_cols=287  Identities=8%  Similarity=-0.042  Sum_probs=176.8

Q ss_pred             eEEEEecCCceEEEEEec-------CCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecc-------------
Q psy10867         16 AISVWEPKGGTLLMSYKG-------ASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRL-------------   75 (343)
Q Consensus        16 ~i~iwd~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~-------------   75 (343)
                      -|.+||..+++...-...       ... .|.++...++|.+.++... +-|.+++..+.+......             
T Consensus       231 Gl~~~d~~~~~~~~~~~~~~~~~~l~~~-~i~~i~~d~~g~lWigt~~-~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~  308 (781)
T 3v9f_A          231 GLALFNANTETFTNFHNNPGNIHGALSS-YIFSIKQLKDNKLWIATEL-NGIMILDLQQNQFLLPEQIRFEFIREGDNNY  308 (781)
T ss_dssp             EEEEEETTTTEEEC-----------CCC-CEEEEEECTTSEEEEEESS-SCEEEEETTCC---------CEEECBCSSTT
T ss_pred             cHheECCCCCcEEEEEcCCCccccccCc-eEEEEEECCCCCEEEEeCC-CCeEEECCCCCeeeeeeccccccccCCCCCC
Confidence            578888766654332111       123 7899999899988887764 458888887665432111             


Q ss_pred             -cCCcceEEEEECCCCCEEEEecCCeEEEEEccCCceEEEec---------ccCCCeEEEEEecCCCEEEEecCCCeEEE
Q psy10867         76 -ICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATAS---------SHYQPITIVKWSADSNFIVTGGEDGTICV  145 (343)
Q Consensus        76 -~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~---------~~~~~v~~~~~~~~~~~l~s~~~dg~i~i  145 (343)
                       .....|.++...++|.+-+++.++.|..++..++.......         .....|.++...+++. |..|+.++-|..
T Consensus       309 ~l~~~~v~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-lWigt~~~Gl~~  387 (781)
T 3v9f_A          309 SLSNASARYIFQDSFNNIWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGK-LWIGTDGGGINV  387 (781)
T ss_dssp             SBSSSCEEEEEECSSCCEEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSC-EEEEEBSSCEEE
T ss_pred             CCCCCeEEEEEEeCCCCEEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCC-EEEEeCCCcEEE
Confidence             12456999999999998888878889999987655432211         1235688998887776 555665667888


Q ss_pred             eecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-
Q psy10867        146 WQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-  224 (343)
Q Consensus       146 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-  224 (343)
                      +|..+.......                   .........|.++...+++  . |..|+.++-+..+|.++++.. .+. 
T Consensus       388 ~~~~~~~~~~~~-------------------~~~~~~~~~v~~i~~d~~g--~-lWigt~~~Gl~~~~~~~~~~~-~~~~  444 (781)
T 3v9f_A          388 FENGKRVAIYNK-------------------ENRELLSNSVLCSLKDSEG--N-LWFGTYLGNISYYNTRLKKFQ-IIEL  444 (781)
T ss_dssp             EETTEEEEECC------------------------CCCSBEEEEEECTTS--C-EEEEETTEEEEEECSSSCEEE-ECCS
T ss_pred             EECCCCeEEEcc-------------------CCCCCCCcceEEEEECCCC--C-EEEEeccCCEEEEcCCCCcEE-Eecc
Confidence            998764321100                   0001234568888888776  3 555777777999998776543 332 


Q ss_pred             ---cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCC
Q psy10867        225 ---LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADE  301 (343)
Q Consensus       225 ---~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg  301 (343)
                         ....|.++...+++.. .+|+. +-|..+|..+.........      .........|.++...++|++.+. +.++
T Consensus       445 ~~~~~~~v~~i~~d~~g~l-wigt~-~Gl~~~~~~~~~~~~~~~~------~~~~~~~~~i~~i~~d~~g~lWig-t~~~  515 (781)
T 3v9f_A          445 EKNELLDVRVFYEDKNKKI-WIGTH-AGVFVIDLASKKVIHHYDT------SNSQLLENFVRSIAQDSEGRFWIG-TFGG  515 (781)
T ss_dssp             TTTCCCCEEEEEECTTSEE-EEEET-TEEEEEESSSSSCCEEECT------TTSSCSCSCEEEEEECTTCCEEEE-ESSS
T ss_pred             CCCCCCeEEEEEECCCCCE-EEEEC-CceEEEeCCCCeEEecccC------cccccccceeEEEEEcCCCCEEEE-EcCC
Confidence               2356899998887764 44555 5588888765322111000      000011467899999888875554 4434


Q ss_pred             cEEEEecccceeeeecc----cCCceEEEEEccCCCeeee
Q psy10867        302 TLKIWHTISRQCLRTIQ----HKGPVLGAFLGLLPPAIHD  337 (343)
Q Consensus       302 ~i~iwd~~~~~~~~~~~----~~~~v~~~~~sp~~~~l~~  337 (343)
                      -|..||..+++......    ....|.++...++|...++
T Consensus       516 Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~  555 (781)
T 3v9f_A          516 GVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLA  555 (781)
T ss_dssp             CEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEEE
T ss_pred             CEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEEE
Confidence            47788877655433211    3456889999888886654

>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1

Probab=99.22  E-value=8.3e-09  Score=91.81  Aligned_cols=256  Identities=13%  Similarity=0.123  Sum_probs=156.6

Q ss_pred             eEEEecCCCCeEEEEecCCceEEEEEecCCC---CcceE-EEEeCCceEEEEEcC-----CCeEEEEeCCCcccceeccc
Q psy10867          6 EVAFSYDGSGAISVWEPKGGTLLMSYKGASV---LSPHS-MCLLGNDYVLGVEKG-----KPMIQAWPVNSQEKAQLRLI   76 (343)
Q Consensus         6 ~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~---~~v~~-~~~~~~~~~~~~~~~-----~~~i~iw~~~~~~~~~~~~~   76 (343)
                      ..+|.++.|+.|..+|..+|+.+.++.....   ..+.+ ..+ .++.+++....     +|.|..+|..+++.+..+..
T Consensus       118 ~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v-~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~  196 (668)
T 1kv9_A          118 DKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRV-VKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYT  196 (668)
T ss_dssp             TEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEE-ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred             CEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEE-ECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecc
Confidence            4567778899999999999999988876421   01111 111 15666655432     48999999999987743321


Q ss_pred             ---CCc----------------------------ceEEEEECCCCCEEEEe-cCC-------------------eEEEEE
Q psy10867         77 ---CPG----------------------------RISSMQASPDAAYIAVS-IET-------------------KLHMWQ  105 (343)
Q Consensus        77 ---~~~----------------------------~v~~~~~s~~~~~l~~~-~d~-------------------~i~v~~  105 (343)
                         ...                            ....+++.|+..++..+ .++                   .|..+|
T Consensus       197 ~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD  276 (668)
T 1kv9_A          197 VPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIR  276 (668)
T ss_dssp             SCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEEC
T ss_pred             cCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEc
Confidence               000                            01236777776666653 333                   499999


Q ss_pred             ccCCceEEEecc--cC-------CCeEEEEEecCCC---EEEEecCCCeEEEeecCccceeeeeecCCCC-------CCC
Q psy10867        106 ISSGRLLATASS--HY-------QPITIVKWSADSN---FIVTGGEDGTICVWQLSRLICKQTVAFGIPG-------SSG  166 (343)
Q Consensus       106 ~~~~~~~~~~~~--~~-------~~v~~~~~~~~~~---~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~-------~~~  166 (343)
                      ..+|+.+..++.  |.       .+.....+..+++   .++.++.+|.+.++|..+++.+....+....       ...
T Consensus       277 ~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g  356 (668)
T 1kv9_A          277 PDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATG  356 (668)
T ss_dssp             TTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTC
T ss_pred             CCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccC
Confidence            999999877753  22       2333333334665   6889999999999999999887554432200       000


Q ss_pred             Ccccc-----ccceeeeeccccc--ceEEEEeecCCCceEEEE------------------------------------e
Q psy10867        167 KGVTG-----LTEPLHVKSQHSL--PVTHVTLSKLGAKSRVAS------------------------------------V  203 (343)
Q Consensus       167 ~~~~~-----~~~~~~~~~~~~~--~v~~~~~~~~~~~~~l~~------------------------------------~  203 (343)
                      .....     ..+......+..+  .-..++++|+.  .+++.                                    .
T Consensus       357 ~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~--g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~  434 (668)
T 1kv9_A          357 RPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGT--GLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAA  434 (668)
T ss_dssp             CEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTT--TEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGG
T ss_pred             CccccccccccCCeeEECCCCccccCCCcceECCCC--CEEEEeccccceEeeeeccccccccccccCccccccCCCCCC
Confidence            00000     0000000000000  01124555554  23222                                    1


Q ss_pred             eCCCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccc
Q psy10867        204 SHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDH  264 (343)
Q Consensus       204 ~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~  264 (343)
                      ..+|.|..||+.+++.+.+.....+.....+...+.++++++.|+.++.||.++.+....+
T Consensus       435 ~~~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~  495 (668)
T 1kv9_A          435 VVSGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQF  495 (668)
T ss_dssp             GCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred             CccceEEEEeCCCCcEEEEccCCCCCcCceeEeCCCEEEEECCcccchhhhhhcChhheEe
Confidence            2348899999999999998886655554455567889999999999999999887665443

>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3

Probab=99.22  E-value=8.1e-08  Score=77.12  Aligned_cols=225  Identities=8%  Similarity=0.024  Sum_probs=139.3

Q ss_pred             cceEEEEECCCCCEEEEe-cCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCC--CeEEEeecCccceee
Q psy10867         79 GRISSMQASPDAAYIAVS-IETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGED--GTICVWQLSRLICKQ  155 (343)
Q Consensus        79 ~~v~~~~~s~~~~~l~~~-~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d--g~i~iwd~~~~~~~~  155 (343)
                      .....++|+++++++++. .++.|..||... +....+. .......+++.++++++++....  ..|..+|..+++...
T Consensus        32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g-~~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~  109 (306)
T 2p4o_A           32 TFLENLASAPDGTIFVTNHEVGEIVSITPDG-NQQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVET  109 (306)
T ss_dssp             CCEEEEEECTTSCEEEEETTTTEEEEECTTC-CEEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEE
T ss_pred             CCcceEEECCCCCEEEEeCCCCeEEEECCCC-ceEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEE
Confidence            457789999999987775 678999999764 3333332 23468899999999966655332  246667766654321


Q ss_pred             eeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCce-EEEe-------e---
Q psy10867        156 TVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGED-LLSL-------I---  224 (343)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~-~~~~-------~---  224 (343)
                      ..                    .. ........++..+.+  ..+++-..++.|.++|..+++. +...       .   
T Consensus       110 ~~--------------------~~-~~~~~~~g~~~~~~~--~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~  166 (306)
T 2p4o_A          110 LL--------------------TL-PDAIFLNGITPLSDT--QYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSES  166 (306)
T ss_dssp             EE--------------------EC-TTCSCEEEEEESSSS--EEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTC
T ss_pred             EE--------------------eC-CCccccCcccccCCC--cEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccC
Confidence            11                    11 111223444545544  5555555688999999765431 1110       0   


Q ss_pred             cCCcEEEEEEcCCCCEEEEE-cCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcE
Q psy10867        225 LDTRLTCVAFDGTEDNIYMG-TSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETL  303 (343)
Q Consensus       225 ~~~~i~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i  303 (343)
                      .-.....+  +|+++.|+++ ...+.|..|++........        ...+. .......++++++|+++++....+.|
T Consensus       167 ~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~--------~~~~~-~~~~P~gi~vd~dG~l~va~~~~~~V  235 (306)
T 2p4o_A          167 VFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGE--------PEIFV-EQTNIDDFAFDVEGNLYGATHIYNSV  235 (306)
T ss_dssp             CSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCC--------CEEEE-ESCCCSSEEEBTTCCEEEECBTTCCE
T ss_pred             CCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCc--------cEEEe-ccCCCCCeEECCCCCEEEEeCCCCeE
Confidence            01124455  7888877665 4578999999874211100        01111 11345678999999988887778899


Q ss_pred             EEEecccceee--eecc-cCCceEEEEEc---cCCCeeeeccc
Q psy10867        304 KIWHTISRQCL--RTIQ-HKGPVLGAFLG---LLPPAIHDYDF  340 (343)
Q Consensus       304 ~iwd~~~~~~~--~~~~-~~~~v~~~~~s---p~~~~l~~~~~  340 (343)
                      .++|.. ++..  ..+. .....++++|.   |+++.|+.++.
T Consensus       236 ~~~~~~-G~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~  277 (306)
T 2p4o_A          236 VRIAPD-RSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTN  277 (306)
T ss_dssp             EEECTT-CCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEEC
T ss_pred             EEECCC-CCEEEEeecccccCCceEEEEecccCCCCEEEEECC
Confidence            999975 6553  2344 33668999999   89888877653

>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}

Probab=99.21  E-value=2e-07  Score=84.98  Aligned_cols=286  Identities=9%  Similarity=-0.016  Sum_probs=174.5

Q ss_pred             CeEEEEecCCceEEEEEe--------------cCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecc-----
Q psy10867         15 GAISVWEPKGGTLLMSYK--------------GASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRL-----   75 (343)
Q Consensus        15 g~i~iwd~~~~~~~~~~~--------------~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~-----   75 (343)
                      +-|.++|..+++......              .... .|.++...++|.+-++... +-|..++..+........     
T Consensus       278 ~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~-~v~~i~~D~~g~lWigt~~-~Gl~~~~~~~~~~~~~~~~~~~~  355 (781)
T 3v9f_A          278 NGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNA-SARYIFQDSFNNIWIGTWG-GGINFISNAPPTFHTWSYSPTQM  355 (781)
T ss_dssp             SCEEEEETTCC---------CEEECBCSSTTSBSSS-CEEEEEECSSCCEEEEEBS-SCEEEECSSCCSCEEEC----CC
T ss_pred             CCeEEECCCCCeeeeeeccccccccCCCCCCCCCCC-eEEEEEEeCCCCEEEEecC-CeEEEeCCCCCcceeeccCcccc
Confidence            457778876654322111              1223 7889999998887777655 568888877654332211     


Q ss_pred             ----cCCcceEEEEECCCCCEEEEecCCeEEEEEccCCceEEEe---cccCCCeEEEEEecCCCEEEEecCCCeEEEeec
Q psy10867         76 ----ICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATA---SSHYQPITIVKWSADSNFIVTGGEDGTICVWQL  148 (343)
Q Consensus        76 ----~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~  148 (343)
                          .....|.++...++|.+.+++.++.|..|+..++......   ......|.++...+++.+ ..|+.++-+..+|.
T Consensus       356 ~~~~l~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~l-Wigt~~~Gl~~~~~  434 (781)
T 3v9f_A          356 NESSLSNKVVSSVCDDGQGKLWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNL-WFGTYLGNISYYNT  434 (781)
T ss_dssp             CSSCCSSSCEEEEEECTTSCEEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCE-EEEETTEEEEEECS
T ss_pred             ccCCCCCcceEEEEEcCCCCEEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCE-EEEeccCCEEEEcC
Confidence                1235699999988898888877777999997654332111   123457889988777764 44676677899988


Q ss_pred             CccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeec---
Q psy10867        149 SRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLIL---  225 (343)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~---  225 (343)
                      .++......                    ........|.++...+++  . |..|+. +-|..||..+++.......   
T Consensus       435 ~~~~~~~~~--------------------~~~~~~~~v~~i~~d~~g--~-lwigt~-~Gl~~~~~~~~~~~~~~~~~~~  490 (781)
T 3v9f_A          435 RLKKFQIIE--------------------LEKNELLDVRVFYEDKNK--K-IWIGTH-AGVFVIDLASKKVIHHYDTSNS  490 (781)
T ss_dssp             SSCEEEECC--------------------STTTCCCCEEEEEECTTS--E-EEEEET-TEEEEEESSSSSCCEEECTTTS
T ss_pred             CCCcEEEec--------------------cCCCCCCeEEEEEECCCC--C-EEEEEC-CceEEEeCCCCeEEecccCccc
Confidence            765321100                    001234578888888777  4 444555 5688899877665433221   


Q ss_pred             ---CCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCc
Q psy10867        226 ---DTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADET  302 (343)
Q Consensus       226 ---~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~  302 (343)
                         ...+.++...++|...+ |+.++-+..||....... .+..     ...  -....|.++...++|++.++. .+|.
T Consensus       491 ~~~~~~i~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~-~~~~-----~~~--l~~~~i~~i~~d~~g~lWi~T-~~Gl  560 (781)
T 3v9f_A          491 QLLENFVRSIAQDSEGRFWI-GTFGGGVGIYTPDMQLVR-KFNQ-----YEG--FCSNTINQIYRSSKGQMWLAT-GEGL  560 (781)
T ss_dssp             SCSCSCEEEEEECTTCCEEE-EESSSCEEEECTTCCEEE-EECT-----TTT--CSCSCEEEEEECTTSCEEEEE-TTEE
T ss_pred             ccccceeEEEEEcCCCCEEE-EEcCCCEEEEeCCCCeEE-EccC-----CCC--CCCCeeEEEEECCCCCEEEEE-CCCc
Confidence               35689999998887555 444344777776442211 1100     001  124578999998888755544 4665


Q ss_pred             EEEEecccceeeeecc-----cCCceEEEEEccCCCeeeec
Q psy10867        303 LKIWHTISRQCLRTIQ-----HKGPVLGAFLGLLPPAIHDY  338 (343)
Q Consensus       303 i~iwd~~~~~~~~~~~-----~~~~v~~~~~sp~~~~l~~~  338 (343)
                      |..||..+++.. .+.     ....|.++...++|...+++
T Consensus       561 v~~~d~~~~~~~-~~~~~~gl~~~~i~~i~~d~~g~lW~~t  600 (781)
T 3v9f_A          561 VCFPSARNFDYQ-VFQRKEGLPNTHIRAISEDKNGNIWAST  600 (781)
T ss_dssp             EEESCTTTCCCE-EECGGGTCSCCCCCEEEECSSSCEEEEC
T ss_pred             eEEECCCCCcEE-EccccCCCCCceEEEEEECCCCCEEEEc
Confidence            588888766532 222     23467888888888776654

>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}

Probab=99.20  E-value=1.2e-08  Score=77.34  Aligned_cols=193  Identities=10%  Similarity=0.033  Sum_probs=128.5

Q ss_pred             eEEEecccC--CCeEEEEEecCCCEEEEecCCC--eEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccce
Q psy10867        111 LLATASSHY--QPITIVKWSADSNFIVTGGEDG--TICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPV  186 (343)
Q Consensus       111 ~~~~~~~~~--~~v~~~~~~~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  186 (343)
                      .+.++ .|.  .....+.|++ +.++.+.+.+|  .|+.+|+.+++......++                    . ...-
T Consensus        11 v~~~~-phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~--------------------~-~~fg   67 (243)
T 3mbr_X           11 VVKRY-PHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVP--------------------P-PYFG   67 (243)
T ss_dssp             EEEEE-ECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECC--------------------T-TCCE
T ss_pred             EEEEc-CCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCC--------------------C-Ccce
Confidence            44555 354  3467899986 56666767654  8999999998776554311                    1 1111


Q ss_pred             EEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccc
Q psy10867        187 THVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHI  266 (343)
Q Consensus       187 ~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~  266 (343)
                      ..+++.  ++ .+....-.++.+.+||..+.+.+.++.....-..++  ++++.|+++..++.|.++|..+........+
T Consensus        68 eGi~~~--~~-~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V  142 (243)
T 3mbr_X           68 AGIVAW--RD-RLIQLTWRNHEGFVYDLATLTPRARFRYPGEGWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKV  142 (243)
T ss_dssp             EEEEEE--TT-EEEEEESSSSEEEEEETTTTEEEEEEECSSCCCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred             eEEEEe--CC-EEEEEEeeCCEEEEEECCcCcEEEEEeCCCCceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEE
Confidence            233443  32 566666779999999999999999998655444454  5677888877799999999888665443321


Q ss_pred             cCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc-c-------------CCceEEEEEccCC
Q psy10867        267 QDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-H-------------KGPVLGAFLGLLP  332 (343)
Q Consensus       267 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~-------------~~~v~~~~~sp~~  332 (343)
                      .      .-...-..++.+.+. +|+..+..-.+..|.+.|..+|+.+..+. .             ..-.+.++++|++
T Consensus       143 ~------~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~  215 (243)
T 3mbr_X          143 T------AGGRPLDNLNELEWV-NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEH  215 (243)
T ss_dssp             E------ETTEECCCEEEEEEE-TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTT
T ss_pred             c------cCCcccccceeeEEe-CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCC
Confidence            1      000011245566665 67666555567799999999999988875 1             1246899999987


Q ss_pred             Ceeeec
Q psy10867        333 PAIHDY  338 (343)
Q Consensus       333 ~~l~~~  338 (343)
                      +.|++.
T Consensus       216 ~~lfVT  221 (243)
T 3mbr_X          216 DRLFVT  221 (243)
T ss_dssp             TEEEEE
T ss_pred             CEEEEE
Confidence            776654

>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*

Probab=99.18  E-value=2.6e-08  Score=86.81  Aligned_cols=255  Identities=10%  Similarity=0.019  Sum_probs=152.2

Q ss_pred             eEEEecCCCCeEEEEecCCceEEEEEecCCC---Ccce-EEEEeCCceEEEEEcC-----CCeEEEEeCCCcccceeccc
Q psy10867          6 EVAFSYDGSGAISVWEPKGGTLLMSYKGASV---LSPH-SMCLLGNDYVLGVEKG-----KPMIQAWPVNSQEKAQLRLI   76 (343)
Q Consensus         6 ~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~---~~v~-~~~~~~~~~~~~~~~~-----~~~i~iw~~~~~~~~~~~~~   76 (343)
                      ..+|.++.++.|..+|..+|+.+.+++....   ..+. +.... ++.+++....     ++.|..+|..+++.+..+..
T Consensus       116 ~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~-~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~  194 (571)
T 2ad6_A          116 GQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVA-KDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFA  194 (571)
T ss_dssp             TEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE-TTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred             CEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEEE-CCEEEEEecCCccCCCCEEEEEECCCCcEEEEEcc
Confidence            4566777789999999999999988764331   0111 11122 5666666552     58999999999887633321


Q ss_pred             CCcc-------------------------------------e-EEEEECCCCCEEEE-ec------------C----CeE
Q psy10867         77 CPGR-------------------------------------I-SSMQASPDAAYIAV-SI------------E----TKL  101 (343)
Q Consensus        77 ~~~~-------------------------------------v-~~~~~s~~~~~l~~-~~------------d----~~i  101 (343)
                      ....                                     + ..+++.++...+.. ..            +    +.|
T Consensus       195 ~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v  274 (571)
T 2ad6_A          195 TGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTI  274 (571)
T ss_dssp             SSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEE
T ss_pred             CCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEE
Confidence            1100                                     0 12455555444443 21            1    369


Q ss_pred             EEEEccCCceEEEecc--cC--------CCeEEEEEecCCC---EEEEecCCCeEEEeecCccceeeeeecCCCCCCCCc
Q psy10867        102 HMWQISSGRLLATASS--HY--------QPITIVKWSADSN---FIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKG  168 (343)
Q Consensus       102 ~v~~~~~~~~~~~~~~--~~--------~~v~~~~~~~~~~---~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~  168 (343)
                      ..+|..+|+.+-.++.  |.        .++. +...++|+   .++.++.+|.+.++|..+++.+....+.........
T Consensus       275 ~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~  353 (571)
T 2ad6_A          275 WGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKK  353 (571)
T ss_dssp             EEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEE
T ss_pred             EEEecCCCcEEEEecCCCCcccccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCcccccc
Confidence            9999999998877653  21        2221 22234674   577889999999999999988877654321000000


Q ss_pred             cc-cccceee--------------eeccccc--ceEEEEeecCCCceEEEEee---------------------------
Q psy10867        169 VT-GLTEPLH--------------VKSQHSL--PVTHVTLSKLGAKSRVASVS---------------------------  204 (343)
Q Consensus       169 ~~-~~~~~~~--------------~~~~~~~--~v~~~~~~~~~~~~~l~~~~---------------------------  204 (343)
                      .. ....++.              ...+..+  .-..++++|+.  .+++...                           
T Consensus       354 ~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~--g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~  431 (571)
T 2ad6_A          354 VDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPES--RTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAM  431 (571)
T ss_dssp             ECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTT--TEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEE
T ss_pred             ccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCC--CEEEEEchhccccccccccccccCCcccccccee
Confidence            00 0000100              0000000  01235666665  3443322                           


Q ss_pred             ----------CCCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccc
Q psy10867        205 ----------HDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDH  264 (343)
Q Consensus       205 ----------~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~  264 (343)
                                .++.|..||..+++.+.++.....+....+...+..+++++.|+.|+.+|.++.+....+
T Consensus       432 ~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~  501 (571)
T 2ad6_A          432 YPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNF  501 (571)
T ss_dssp             EECTTSTTSCCCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred             ccCccccCCCCCCeEEEEECCCCCEEEEecCCCCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEE
Confidence                      358999999999999998876555444333445678888999999999999887765544

>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*

Probab=99.17  E-value=5.2e-08  Score=78.87  Aligned_cols=223  Identities=9%  Similarity=-0.062  Sum_probs=136.1

Q ss_pred             ceEEEEECCCCCEEEE-ecCCeEEEEEccCCceEEEecc--------------------cCCCeEEEEEec-CCCEEEEe
Q psy10867         80 RISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATASS--------------------HYQPITIVKWSA-DSNFIVTG  137 (343)
Q Consensus        80 ~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~--------------------~~~~v~~~~~~~-~~~~l~s~  137 (343)
                      ....+++.++++++.+ ..++.|..|+..+++... +..                    ....+..+++.+ +++ |+.+
T Consensus        20 ~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~-l~v~   97 (322)
T 2fp8_A           20 APNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVD-FAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ-LYIV   97 (322)
T ss_dssp             CCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEE-EEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE-EEEE
T ss_pred             CceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEE-EecccccccccccccccchhccccCCCCceEEEcCCCCc-EEEE
Confidence            4567889999984554 577899999987654432 210                    113578999997 565 4444


Q ss_pred             cCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeec-ccccceEEEEeec-CCCceEEEEeeC----------
Q psy10867        138 GEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKS-QHSLPVTHVTLSK-LGAKSRVASVSH----------  205 (343)
Q Consensus       138 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~-~~~~~~l~~~~~----------  205 (343)
                      ...+.+..+|..++.... +.                  .... ........+++.+ ++  .+.++-..          
T Consensus        98 d~~~~i~~~d~~~g~~~~-~~------------------~~~~~~~~~~p~~i~~d~~~G--~l~v~d~~~~~~~~~~~~  156 (322)
T 2fp8_A           98 DCYYHLSVVGSEGGHATQ-LA------------------TSVDGVPFKWLYAVTVDQRTG--IVYFTDVSTLYDDRGVQQ  156 (322)
T ss_dssp             ETTTEEEEECTTCEECEE-EE------------------SEETTEECSCEEEEEECTTTC--CEEEEESCSSCCTTCHHH
T ss_pred             ECCCCEEEEeCCCCEEEE-ec------------------ccCCCCcccccceEEEecCCC--EEEEECCcccccccccce
Confidence            444558888876542211 10                  0001 1123467899999 88  55555322          


Q ss_pred             -------CCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEE-cCCCcEEEEEeecccccccccccCCCCCCcccc
Q psy10867        206 -------DRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMG-TSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIG  277 (343)
Q Consensus       206 -------d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~  277 (343)
                             ++.|..||..+++.............++++|+++.|+++ ..++.|.+|++...... .        ...+..
T Consensus       157 ~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~-~--------~~~~~~  227 (322)
T 2fp8_A          157 IMDTSDKTGRLIKYDPSTKETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKG-T--------AEVLVK  227 (322)
T ss_dssp             HHHHTCCCEEEEEEETTTTEEEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTT-C--------EEEEEE
T ss_pred             ehcccCCCceEEEEeCCCCEEEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCC-c--------cceEEe
Confidence                   377889998766543333323345679999999977766 55789999998752110 0        001111


Q ss_pred             ccCcEEEEEEccCCCEEEEEeC----------CCcEEEEecccceeeeecc-c----CCceEEEEEccCCCeeee
Q psy10867        278 HEKQVTSLSCSITGITLLSSSA----------DETLKIWHTISRQCLRTIQ-H----KGPVLGAFLGLLPPAIHD  337 (343)
Q Consensus       278 ~~~~v~~~~~s~~~~~l~s~~~----------dg~i~iwd~~~~~~~~~~~-~----~~~v~~~~~sp~~~~l~~  337 (343)
                      ..+ ...++++++|++.++...          .+.|..+|. .++.+..+. .    ...++.+++ .+++..++
T Consensus       228 ~~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~-~G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~  299 (322)
T 2fp8_A          228 IPN-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDE-FGNILEVIPLPPPFAGEHFEQIQE-HDGLLYIG  299 (322)
T ss_dssp             CSS-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECT-TSCEEEEEECCTTTTTSCCCEEEE-ETTEEEEE
T ss_pred             CCC-CCCeEECCCCCEEEEecCcccccccCCCccEEEEECC-CCCEEEEEECCCCCccccceEEEE-eCCEEEEe
Confidence            122 778999999987766544          467888886 577777665 2    234667766 34444433

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=99.14  E-value=7.6e-07  Score=72.74  Aligned_cols=242  Identities=8%  Similarity=-0.063  Sum_probs=151.9

Q ss_pred             cceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEE-E-ecCCeEEEEEccCCceEEEe
Q psy10867         38 SPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIA-V-SIETKLHMWQISSGRLLATA  115 (343)
Q Consensus        38 ~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-~-~~d~~i~v~~~~~~~~~~~~  115 (343)
                      ...|.+..++..++++..  ..|+..++......... .....+..++|.+.+..|. + ...+.|+.+++..+.....+
T Consensus        35 ~~~C~~~~~~~~ll~~~~--~~I~~i~~~g~~~~~~~-~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~  111 (349)
T 3v64_C           35 RRSCKALGPEPVLLFANR--IDIRQVLPHRSEYTLLL-NNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVV  111 (349)
T ss_dssp             SSCEEESSSCCEEEEECB--SCEEEECTTSCCEEEEE-CSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE
T ss_pred             CCcccccccCceeEeecc--cceEEEeCCCCeeEEee-cCCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEE
Confidence            446666666555555543  46888888765544333 3345678999997655554 5 35679999998876544444


Q ss_pred             cccCCCeEEEEEecC-CCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecC
Q psy10867        116 SSHYQPITIVKWSAD-SNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKL  194 (343)
Q Consensus       116 ~~~~~~v~~~~~~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  194 (343)
                      .........+++.+. +++.++-...+.|.+.++.....                      .............++++|.
T Consensus       112 ~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~----------------------~~l~~~~l~~P~~iavdp~  169 (349)
T 3v64_C          112 STGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR----------------------KVLLWQSLEKPRAIALHPM  169 (349)
T ss_dssp             CSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC----------------------EEEECTTCSCEEEEEEETT
T ss_pred             eCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCce----------------------EEEEeCCCCCcceEEEecC
Confidence            333344578999874 44555656678899998875421                      1111223345789999986


Q ss_pred             CCceEEEEeeCC-CeEEEEecCCCceEEEee--cCCcEEEEEEcCCCCEEEEEc-CCCcEEEEEeecccccccccccCCC
Q psy10867        195 GAKSRVASVSHD-RTCKIFDLCTGEDLLSLI--LDTRLTCVAFDGTEDNIYMGT-SEGVIKSFCLRQVPRTRDHHIQDST  270 (343)
Q Consensus       195 ~~~~~l~~~~~d-~~i~~wd~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~  270 (343)
                      +. .++++-... +.|..+++... ....+.  .-.....++++|++..|+.+. ..+.|..+|+.......        
T Consensus       170 ~g-~ly~td~~~~~~I~r~~~dG~-~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~--------  239 (349)
T 3v64_C          170 EG-TIYWTDWGNTPRIEASSMDGS-GRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKA--------  239 (349)
T ss_dssp             TT-EEEEEECSSSCEEEEEETTSC-SCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE--------
T ss_pred             cC-eEEEeccCCCCEEEEEeCCCC-CcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEE--------
Confidence            53 555555555 78988887543 333332  234578999999887777664 46788888876422111        


Q ss_pred             CCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc
Q psy10867        271 SNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ  318 (343)
Q Consensus       271 ~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~  318 (343)
                         .+.........+++ ..+.++++-...+.|..++..+|+.+..+.
T Consensus       240 ---~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G~~~~~i~  283 (349)
T 3v64_C          240 ---VISQGLPHPFAITV-FEDSLYWTDWHTKSINSANKFTGKNQEIIR  283 (349)
T ss_dssp             ---EECSSCSSEEEEEE-ETTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred             ---EEeCCCCCceEEEE-ECCEEEEecCCCCeEEEEEccCCCccEEec
Confidence               11112345677888 355566666677888888877777666655

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=99.13  E-value=5.1e-07  Score=74.83  Aligned_cols=251  Identities=8%  Similarity=-0.080  Sum_probs=153.2

Q ss_pred             eEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEE-E-ecCCeEEEEEccCCceEEEecc
Q psy10867         40 HSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIA-V-SIETKLHMWQISSGRLLATASS  117 (343)
Q Consensus        40 ~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-~-~~d~~i~v~~~~~~~~~~~~~~  117 (343)
                      .|.+..+.+.++++. . ..|+..++......... .....+..++|.+.+..|. + ...+.|+.+++..+.....+..
T Consensus        80 ~C~~~~~~~~l~~~~-~-~~I~~i~~~~~~~~~~~-~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~  156 (386)
T 3v65_B           80 SCKALGPEPVLLFAN-R-IDIRQVLPHRSEYTLLL-NNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVST  156 (386)
T ss_dssp             CEEECSSCCEEEEEC-B-SCEEEECTTSCCCEEEE-CSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECS
T ss_pred             eECCccccceeEeec-C-ccceeeccCCCcEEEEe-cCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeC
Confidence            444544544444443 3 56888888776544433 3345688999997655444 5 3567999999887654444433


Q ss_pred             cCCCeEEEEEecCC-CEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCC
Q psy10867        118 HYQPITIVKWSADS-NFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGA  196 (343)
Q Consensus       118 ~~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  196 (343)
                      .......+++.+.+ +++++-...+.|.+.++.....                      .............+++.|.+.
T Consensus       157 ~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~----------------------~~l~~~~l~~P~giavdp~~g  214 (386)
T 3v65_B          157 GLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR----------------------KVLLWQSLEKPRAIALHPMEG  214 (386)
T ss_dssp             SCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSC----------------------EEEECSSCSCEEEEEEETTTT
T ss_pred             CCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCce----------------------EEeecCCCCCCcEEEEEcCCC
Confidence            33445678888754 4555556677888888865321                      111122335678999998663


Q ss_pred             ceEEEEeeCC-CeEEEEecCCCceEEEee-cCCcEEEEEEcCCCCEEEEEc-CCCcEEEEEeecccccccccccCCCCCC
Q psy10867        197 KSRVASVSHD-RTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIYMGT-SEGVIKSFCLRQVPRTRDHHIQDSTSNP  273 (343)
Q Consensus       197 ~~~l~~~~~d-~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~~~  273 (343)
                       .++++-... +.|..+++.......... .-.....++++|++..|+.+. ..+.|..+|+.......           
T Consensus       215 -~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~-----------  282 (386)
T 3v65_B          215 -TIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKA-----------  282 (386)
T ss_dssp             -EEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEE-----------
T ss_pred             -eEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEE-----------
Confidence             455554444 788888876433322222 234578999998877777664 46778888876422111           


Q ss_pred             ccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc-cCCceEEEEE
Q psy10867        274 DFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVLGAFL  328 (343)
Q Consensus       274 ~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~  328 (343)
                      .+.........+++ ..+.++++-...+.|..++..+|+.+..+. .......+++
T Consensus       283 ~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G~~~~~i~~~~~~p~gi~v  337 (386)
T 3v65_B          283 VISQGLPHPFAITV-FEDSLYWTDWHTKSINSANKFTGKNQEIIRNKLHFPMDIHT  337 (386)
T ss_dssp             EECSSCSSEEEEEE-ETTEEEEEETTTTEEEEEETTTCCSCEEEECSCSCCCCEEE
T ss_pred             EEECCCCCceEEEE-ECCEEEEeeCCCCeEEEEECCCCcceEEEccCCCCCceEEE
Confidence            11112345677888 445566676777889999877777766665 3233444443

>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A

Probab=99.07  E-value=9.1e-08  Score=85.25  Aligned_cols=273  Identities=10%  Similarity=-0.017  Sum_probs=148.2

Q ss_pred             eEEEEeC-CceEEEEEcCCC-----------eEEEEeCCCcccceecc---cCCcceEEEEECCCCCEEEEe--cCCeEE
Q psy10867         40 HSMCLLG-NDYVLGVEKGKP-----------MIQAWPVNSQEKAQLRL---ICPGRISSMQASPDAAYIAVS--IETKLH  102 (343)
Q Consensus        40 ~~~~~~~-~~~~~~~~~~~~-----------~i~iw~~~~~~~~~~~~---~~~~~v~~~~~s~~~~~l~~~--~d~~i~  102 (343)
                      .+.++.| ++++++.|+.+.           .+.+||..+++......   .+.....++++.+++++++.|  .+..+.
T Consensus       189 ~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~  268 (656)
T 1k3i_A          189 AAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTS  268 (656)
T ss_dssp             SEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEE
T ss_pred             eeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceE
Confidence            4667777 888887765322           58899998876543221   222334457788899988874  345899


Q ss_pred             EEEccCCceEEEecccCC-CeEEEEEecCCCEEEEec-CC-----CeEEEeecCccceeeeeecCCCCCCCCccccccce
Q psy10867        103 MWQISSGRLLATASSHYQ-PITIVKWSADSNFIVTGG-ED-----GTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEP  175 (343)
Q Consensus       103 v~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~s~~-~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (343)
                      +||..+++-...-..+.. .-.+++..++++.++.|+ .+     ..+.+||..+..-...-...            ..+
T Consensus       269 ~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~------------~~p  336 (656)
T 1k3i_A          269 LYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAK------------VNP  336 (656)
T ss_dssp             EEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSC------------SGG
T ss_pred             EecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCcc------------ccc
Confidence            999988765433222222 123456667899999988 44     46899999875422110000            000


Q ss_pred             eeeecccccceEEEEeecCCCceEEEEee---------CCCeEEEEecCCCceEEEeecC----------CcEEEEEEcC
Q psy10867        176 LHVKSQHSLPVTHVTLSKLGAKSRVASVS---------HDRTCKIFDLCTGEDLLSLILD----------TRLTCVAFDG  236 (343)
Q Consensus       176 ~~~~~~~~~~v~~~~~~~~~~~~~l~~~~---------~d~~i~~wd~~~~~~~~~~~~~----------~~i~~~~~~~  236 (343)
                      .... .+.     ..+..++  ..++.++         ....+..||..+..........          ..-.++.|..
T Consensus       337 ~~~~-~~~-----~~~~~~~--~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~  408 (656)
T 1k3i_A          337 MLTA-DKQ-----GLYRSDN--HAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDA  408 (656)
T ss_dssp             GCCC-CTT-----GGGTTTC--SCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEET
T ss_pred             cccc-ccc-----ceeecCC--ceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccC
Confidence            0000 000     0011122  2333333         2346788888776543322211          1234455543


Q ss_pred             -CCCEEEEEcCCC-----------cEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCC----
Q psy10867        237 -TEDNIYMGTSEG-----------VIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSAD----  300 (343)
Q Consensus       237 -~~~~l~~~~~d~-----------~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d----  300 (343)
                       +++.+++|+.++           .|.+||..+..-...   .    ...+.. ...-.+++..|++++++.|+.+    
T Consensus       409 ~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~---~----~~~mp~-~R~~~~~~~l~~g~i~v~GG~~~~~~  480 (656)
T 1k3i_A          409 VKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVF---A----SNGLYF-ARTFHTSVVLPDGSTFITGGQRRGIP  480 (656)
T ss_dssp             TTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEE---C----TTCCSS-CCBSCEEEECTTSCEEEECCBSBCCT
T ss_pred             CCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEE---c----cCCCCC-CcccCCeEECCCCCEEEECCcccCcC
Confidence             677777777532           466666543211000   0    001111 1112234566899999999864    


Q ss_pred             -------CcEEEEecccceeee--ecc-cCCceEEEEEccCCCeeeeccc
Q psy10867        301 -------ETLKIWHTISRQCLR--TIQ-HKGPVLGAFLGLLPPAIHDYDF  340 (343)
Q Consensus       301 -------g~i~iwd~~~~~~~~--~~~-~~~~v~~~~~sp~~~~l~~~~~  340 (343)
                             ..+.+||..+++-..  .+. .........+.|+++.++.++.
T Consensus       481 ~~~~~~~~~v~~ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~  530 (656)
T 1k3i_A          481 FEDSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGG  530 (656)
T ss_dssp             TCCCSBCCCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred             cCCCCcccceEEEcCCCCceeecCCCCCccccccHhhcCCCcEEEecCCC
Confidence                   468999988765332  222 1222334567799999998874

>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*

Probab=99.05  E-value=2.4e-07  Score=80.87  Aligned_cols=253  Identities=9%  Similarity=0.021  Sum_probs=147.7

Q ss_pred             EEecCCCCeEEEEecCCceEEEEEecCCC---Ccce-EEEEeCCceEEEEEc-----CCCeEEEEeCCCcccceecccCC
Q psy10867          8 AFSYDGSGAISVWEPKGGTLLMSYKGASV---LSPH-SMCLLGNDYVLGVEK-----GKPMIQAWPVNSQEKAQLRLICP   78 (343)
Q Consensus         8 ~~s~~~dg~i~iwd~~~~~~~~~~~~~~~---~~v~-~~~~~~~~~~~~~~~-----~~~~i~iw~~~~~~~~~~~~~~~   78 (343)
                      +|.++.|+.|..+|..+|+.+.+......   ..+. ...+. ++.+++.+.     .++.|+-+|..+++.+..+....
T Consensus       124 V~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~-~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~  202 (599)
T 1w6s_A          124 ILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVV-KDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATG  202 (599)
T ss_dssp             EEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE-TTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSS
T ss_pred             EEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEEE-CCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCC
Confidence            67777899999999999999988765331   0111 11222 566666553     25899999999998763322111


Q ss_pred             cc-------------------------------------e-EEEEECCCCCEEEE-ecC----------------CeEEE
Q psy10867         79 GR-------------------------------------I-SSMQASPDAAYIAV-SIE----------------TKLHM  103 (343)
Q Consensus        79 ~~-------------------------------------v-~~~~~s~~~~~l~~-~~d----------------~~i~v  103 (343)
                      ..                                     + ..+++.++..++.. ..+                +.|..
T Consensus       203 ~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~A  282 (599)
T 1w6s_A          203 PDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFG  282 (599)
T ss_dssp             CHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEE
T ss_pred             CccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEE
Confidence            00                                     0 12344455555554 222                48999


Q ss_pred             EEccCCceEEEecccC----------CCeEEEEEe-cCC---CEEEEecCCCeEEEeecCccceeeeeecCCCC------
Q psy10867        104 WQISSGRLLATASSHY----------QPITIVKWS-ADS---NFIVTGGEDGTICVWQLSRLICKQTVAFGIPG------  163 (343)
Q Consensus       104 ~~~~~~~~~~~~~~~~----------~~v~~~~~~-~~~---~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~------  163 (343)
                      +|.++|+.+-.++...          .++. +... .+|   +.++.++.+|.+.++|..+++.+....+....      
T Consensus       283 ld~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~  361 (599)
T 1w6s_A          283 RDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSV  361 (599)
T ss_dssp             EETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEE
T ss_pred             EeCCCCceeeEeecCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCccccccc
Confidence            9999999887765321          1221 2222 467   56777899999999999999888776543210      


Q ss_pred             --CCCCccc-------cccceeeeecccc--cceEEEEeecCCCceEEEE------------------------------
Q psy10867        164 --SSGKGVT-------GLTEPLHVKSQHS--LPVTHVTLSKLGAKSRVAS------------------------------  202 (343)
Q Consensus       164 --~~~~~~~-------~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~l~~------------------------------  202 (343)
                        ..+....       ...+......+..  ..-..++++|+.  .+++.                              
T Consensus       362 ~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~--~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~  439 (599)
T 1w6s_A          362 DLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKR--ELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMY  439 (599)
T ss_dssp             CTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTT--TEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEE
T ss_pred             ccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCC--CEEEEeccccceeeecccccccCCcceecccceec
Confidence              0000000       0000000000000  001123344432  12211                              


Q ss_pred             ---ee------CCCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccc
Q psy10867        203 ---VS------HDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDH  264 (343)
Q Consensus       203 ---~~------~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~  264 (343)
                         .+      ..|.|..||+.+++.+.+.....+...-.+...+..++.++.|+.++.||.++.+.....
T Consensus       440 ~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~  510 (599)
T 1w6s_A          440 PGPKGDRQNYEGLGQIKAYNAITGDYKWEKMERFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKF  510 (599)
T ss_dssp             ECTTSBTTTTBCCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred             cCCcCCcccCCCcCeEEEEECCCCCEEeEecCCCCccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEe
Confidence               11      458999999999999988875443322223335778888999999999999998776554

>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1

Probab=99.01  E-value=3.2e-07  Score=80.14  Aligned_cols=256  Identities=13%  Similarity=0.077  Sum_probs=147.9

Q ss_pred             eEEEecCCCCeEEEEecCCceEEEEEecCCC---Ccce-EEEEeCC---ce-EEEEEc------CCCeEEEEeCCCcccc
Q psy10867          6 EVAFSYDGSGAISVWEPKGGTLLMSYKGASV---LSPH-SMCLLGN---DY-VLGVEK------GKPMIQAWPVNSQEKA   71 (343)
Q Consensus         6 ~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~---~~v~-~~~~~~~---~~-~~~~~~------~~~~i~iw~~~~~~~~   71 (343)
                      ..+|.++.++.|..+|..+|+.+.+++....   ..+. +..+..+   ++ .+..+.      .++.|.-+|..+++.+
T Consensus       118 ~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~  197 (582)
T 1flg_A          118 DKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEI  197 (582)
T ss_dssp             TEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEE
T ss_pred             CEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEE
Confidence            3466667789999999999999988765431   0111 1112222   21 344433      2589999999998876


Q ss_pred             eecccCCcce-----------------------------------------EEEEECCCCCEEEE-ec------------
Q psy10867         72 QLRLICPGRI-----------------------------------------SSMQASPDAAYIAV-SI------------   97 (343)
Q Consensus        72 ~~~~~~~~~v-----------------------------------------~~~~~s~~~~~l~~-~~------------   97 (343)
                      -........+                                         ..+++.|+..++.. ..            
T Consensus       198 W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~  277 (582)
T 1flg_A          198 WMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTA  277 (582)
T ss_dssp             EEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSC
T ss_pred             eecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCccccc
Confidence            4322110000                                         12445555555553 21            


Q ss_pred             --------C----CeEEEEEccCCceEEEecc--cC--------CCeEEEEEe-cCCC---EEEEecCCCeEEEeecCcc
Q psy10867         98 --------E----TKLHMWQISSGRLLATASS--HY--------QPITIVKWS-ADSN---FIVTGGEDGTICVWQLSRL  151 (343)
Q Consensus        98 --------d----~~i~v~~~~~~~~~~~~~~--~~--------~~v~~~~~~-~~~~---~l~s~~~dg~i~iwd~~~~  151 (343)
                              |    +.|..+|..+|+.+-.++.  |.        .++. +... .+|+   .++.++.+|.++++|..++
T Consensus       278 ~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG  356 (582)
T 1flg_A          278 KGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNG  356 (582)
T ss_dssp             TTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTTC
T ss_pred             CCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCCC
Confidence                    2    5899999999999877643  32        1221 2221 4664   7888999999999999999


Q ss_pred             ceeeeeecCCCCC--------CCCcc-----c--------cccceeeeeccccc--ceEEEEeecCCCceEEEEe-----
Q psy10867        152 ICKQTVAFGIPGS--------SGKGV-----T--------GLTEPLHVKSQHSL--PVTHVTLSKLGAKSRVASV-----  203 (343)
Q Consensus       152 ~~~~~~~~~~~~~--------~~~~~-----~--------~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~l~~~-----  203 (343)
                      +.+..........        .+...     .        ...+.........+  .-..++++|+.  .+++..     
T Consensus       357 ~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~--g~~yv~~~~~~  434 (582)
T 1flg_A          357 KLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDT--GLFYVPANHWK  434 (582)
T ss_dssp             CEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTT--CCEEEEEECEE
T ss_pred             CEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCC--CEEEEechhcc
Confidence            8887766432100        00000     0        00000000000000  01134445443  222221     


Q ss_pred             ----------------------------eCCCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEe
Q psy10867        204 ----------------------------SHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCL  255 (343)
Q Consensus       204 ----------------------------~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~  255 (343)
                                                  ..+|.|..||+.+++.+.+.....+...-.....+.++++++.|+.++.||.
T Consensus       435 ~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g~~dg~l~A~D~  514 (582)
T 1flg_A          435 EDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGTGDGYFKAFDA  514 (582)
T ss_dssp             EEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEECTTSEEEEEET
T ss_pred             eeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCCCCcccceEeCCCEEEEECCCCcEEEEEC
Confidence                                        1368999999999999988875544332222334778888999999999999


Q ss_pred             ecccccccc
Q psy10867        256 RQVPRTRDH  264 (343)
Q Consensus       256 ~~~~~~~~~  264 (343)
                      ++.+...++
T Consensus       515 ~tG~~lW~~  523 (582)
T 1flg_A          515 KSGKELWKF  523 (582)
T ss_dssp             TTCCEEEEE
T ss_pred             CCCCEEEEe
Confidence            987766544

>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}

Probab=99.00  E-value=1.8e-06  Score=66.38  Aligned_cols=208  Identities=11%  Similarity=0.094  Sum_probs=134.5

Q ss_pred             EEecCCCCcceEEEEeCC-ceEEEEEcCCCeEEEEeCCCcccceecc-cCCcceEEEEECCCCCEEEEe-cCCeEEEEEc
Q psy10867         30 SYKGASVLSPHSMCLLGN-DYVLGVEKGKPMIQAWPVNSQEKAQLRL-ICPGRISSMQASPDAAYIAVS-IETKLHMWQI  106 (343)
Q Consensus        30 ~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~i~iw~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~-~d~~i~v~~~  106 (343)
                      .+.+-.. .+..++++|+ +.++++...++.|...|.. ++.++... ........+++.+++.++++. .++.+.++++
T Consensus        21 ~l~g~~~-~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v   98 (255)
T 3qqz_A           21 EIAGITN-NISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISL   98 (255)
T ss_dssp             ECTTCCS-CEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEE
T ss_pred             ECCCccc-CcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEc
Confidence            4556666 8999999986 5777777778899999988 66554432 323567889999999876764 4678999988


Q ss_pred             cCCce---EEEec------ccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceee
Q psy10867        107 SSGRL---LATAS------SHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLH  177 (343)
Q Consensus       107 ~~~~~---~~~~~------~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (343)
                      .....   +....      ..+.....++|.|.++.|+++.+.....+|.++.......+.            ....+..
T Consensus        99 ~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~------------i~~~~~~  166 (255)
T 3qqz_A           99 TPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELH------------ISKDKAL  166 (255)
T ss_dssp             CTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCE------------EEECHHH
T ss_pred             CCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCcee------------eecchhh
Confidence            65542   22221      134457899999998877777765555666654210000000            0000000


Q ss_pred             eecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecC----------CcEEEEEEcCCCCEEEEEcCC
Q psy10867        178 VKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILD----------TRLTCVAFDGTEDNIYMGTSE  247 (343)
Q Consensus       178 ~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~----------~~i~~~~~~~~~~~l~~~~~d  247 (343)
                      .-..+...+.+++++|... ++++.....+.+..+|. +++.+..+...          .....++|.++|+. ++.+.-
T Consensus       167 ~~~~~~~d~S~l~~dp~tg-~lliLS~~s~~L~~~d~-~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~l-yIvsE~  243 (255)
T 3qqz_A          167 QRQFTLDDVSGAEFNQQKN-TLLVLSHESRALQEVTL-VGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNI-YIVSEP  243 (255)
T ss_dssp             HHTCCSSCCCEEEEETTTT-EEEEEETTTTEEEEECT-TCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCE-EEEETT
T ss_pred             ccccccCCceeEEEcCCCC-eEEEEECCCCeEEEEcC-CCCEEEEEEcCCccCCcccccCCCCeeEECCCCCE-EEEcCC
Confidence            0011234578999999864 67777778899999995 46676666533          25789999999984 444666


Q ss_pred             CcEEEEE
Q psy10867        248 GVIKSFC  254 (343)
Q Consensus       248 ~~i~i~d  254 (343)
                      +.++.|.
T Consensus       244 n~~y~f~  250 (255)
T 3qqz_A          244 NRFYRFT  250 (255)
T ss_dssp             TEEEEEE
T ss_pred             ceEEEEE
Confidence            6666554

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=98.99  E-value=5.2e-06  Score=66.80  Aligned_cols=226  Identities=12%  Similarity=-0.002  Sum_probs=138.8

Q ss_pred             CeEEEEeCCCcccceecccCCcceEEEEECCCCCEEE-E-ecCCeEEEEEccC----CceEEEecccCCCeEEEEEecCC
Q psy10867         58 PMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIA-V-SIETKLHMWQISS----GRLLATASSHYQPITIVKWSADS  131 (343)
Q Consensus        58 ~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-~-~~d~~i~v~~~~~----~~~~~~~~~~~~~v~~~~~~~~~  131 (343)
                      ..|+..++.+.+..... ........++|.+++..|. + ...+.|..+++..    ......+.........+++.+.+
T Consensus        10 ~~I~~i~~~~~~~~~~~-~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~   88 (316)
T 1ijq_A           10 HEVRKMTLDRSEYTSLI-PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIH   88 (316)
T ss_dssp             SSEEEEETTSCCCEEEE-CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTT
T ss_pred             CeEEEEECCCcceEehh-cCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecC
Confidence            46899999887655443 3345678999998665444 5 3568999999876    22222333222445789998744


Q ss_pred             -CEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCC-CeE
Q psy10867        132 -NFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHD-RTC  209 (343)
Q Consensus       132 -~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d-~~i  209 (343)
                       ++.++-...+.|.+.++......                      ............++++|.+. .++++.... +.|
T Consensus        89 ~~ly~~d~~~~~I~~~~~~g~~~~----------------------~~~~~~~~~P~~iavdp~~g-~ly~~d~~~~~~I  145 (316)
T 1ijq_A           89 SNIYWTDSVLGTVSVADTKGVKRK----------------------TLFRENGSKPRAIVVDPVHG-FMYWTDWGTPAKI  145 (316)
T ss_dssp             TEEEEEETTTTEEEEEETTSSSEE----------------------EEEECTTCCEEEEEEETTTT-EEEEEECSSSCEE
T ss_pred             CeEEEEECCCCEEEEEeCCCCceE----------------------EEEECCCCCcceEEeCCCCC-EEEEEccCCCCeE
Confidence             44555567789999998753211                      11112334678999998652 444444333 788


Q ss_pred             EEEecCCCceEEEee--cCCcEEEEEEcCCCCEEEEEc-CCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEE
Q psy10867        210 KIFDLCTGEDLLSLI--LDTRLTCVAFDGTEDNIYMGT-SEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLS  286 (343)
Q Consensus       210 ~~wd~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  286 (343)
                      ...++. ++....+.  .-.....++++|++..|+.+. ..+.|..+|+...... .        +............++
T Consensus       146 ~~~~~d-G~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~-~--------~~~~~~~~~~P~gia  215 (316)
T 1ijq_A          146 KKGGLN-GVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRK-T--------ILEDEKRLAHPFSLA  215 (316)
T ss_dssp             EEEETT-SCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE-E--------EEECTTTTSSEEEEE
T ss_pred             EEEcCC-CCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceE-E--------EeecCCccCCcEEEE
Confidence            888875 44433332  234578999999888777664 4678999998642211 1        000111123456788


Q ss_pred             EccCCCEEEEEeCCCcEEEEecccceeeeecc
Q psy10867        287 CSITGITLLSSSADETLKIWHTISRQCLRTIQ  318 (343)
Q Consensus       287 ~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~  318 (343)
                      +. .+.++++-...+.|..++..+|+.+..+.
T Consensus       216 v~-~~~ly~~d~~~~~V~~~~~~~g~~~~~i~  246 (316)
T 1ijq_A          216 VF-EDKVFWTDIINEAIFSANRLTGSDVNLLA  246 (316)
T ss_dssp             EE-TTEEEEEETTTTEEEEEETTTCCCCEEEE
T ss_pred             EE-CCEEEEEECCCCeEEEEeCCCCcceEEEe
Confidence            75 45666666677889999987777665554

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=98.98  E-value=8.4e-06  Score=67.86  Aligned_cols=243  Identities=10%  Similarity=-0.052  Sum_probs=148.8

Q ss_pred             EEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEE-E-ecCCeEEEEEccCC----ceEEEecccCCCeE
Q psy10867         50 VLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIA-V-SIETKLHMWQISSG----RLLATASSHYQPIT  123 (343)
Q Consensus        50 ~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-~-~~d~~i~v~~~~~~----~~~~~~~~~~~~v~  123 (343)
                      ++..+.. ..|+..++......... .....+..++|.+.+..|. + ...+.|+.+++...    .....+........
T Consensus        85 ~ll~~~~-~~I~~i~l~~~~~~~~~-~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~  162 (400)
T 3p5b_L           85 YLFFTNR-HEVRKMTLDRSEYTSLI-PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD  162 (400)
T ss_dssp             EEEEEET-TEEEEECTTSCSCEEEE-CSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEE
T ss_pred             eeEEecc-ceeEEEccCCcceeEec-cccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcc
Confidence            3444444 68999998876554433 4456788999998655444 4 35678999998652    23333333445678


Q ss_pred             EEEEec-CCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEE
Q psy10867        124 IVKWSA-DSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVAS  202 (343)
Q Consensus       124 ~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~  202 (343)
                      .+++.+ .+++.++-...+.|.+.++......                      ............+++.|.+. .++++
T Consensus       163 glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~----------------------~l~~~~~~~P~~iavdp~~g-~ly~t  219 (400)
T 3p5b_L          163 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRK----------------------TLFRENGSKPRAIVVDPVHG-FMYWT  219 (400)
T ss_dssp             EEEEETTTTEEEEEETTTTEEEEECTTTCSEE----------------------EEEECSSCCEEEEEEETTTT-EEEEE
T ss_pred             cEEEEecCCceEEEECCCCeEEEEeCCCCceE----------------------EEEeCCCCCcceEEEecccC-eEEEE
Confidence            899987 4555556666788999998764221                      11122334578999998652 44444


Q ss_pred             ee-CCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCCEEEEEc-CCCcEEEEEeecccccccccccCCCCCCcccccc
Q psy10867        203 VS-HDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIYMGT-SEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHE  279 (343)
Q Consensus       203 ~~-~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~  279 (343)
                      -. ..+.|...++.......... .-.....+++++++..|+.+. ..+.|..+|+........         ......-
T Consensus       220 d~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~---------~~~~~~l  290 (400)
T 3p5b_L          220 DWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTI---------LEDEKRL  290 (400)
T ss_dssp             ECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEE---------EECSSTT
T ss_pred             eCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEE---------EeCCCCC
Confidence            32 24788888876433332222 235688999999888887764 467899988765322111         0111122


Q ss_pred             CcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc-cCCceEEEE
Q psy10867        280 KQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVLGAF  327 (343)
Q Consensus       280 ~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~  327 (343)
                      .....+++. .+.++++-...+.|..+|..+|+.+..+. ......++.
T Consensus       291 ~~P~gl~v~-~~~lywtd~~~~~V~~~~~~~G~~~~~i~~~~~~p~~i~  338 (400)
T 3p5b_L          291 AHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMV  338 (400)
T ss_dssp             SSEEEEEEE-TTEEEEEESSSCSEEEEESSSCCCCEEEECSCSCEEEEE
T ss_pred             CCCEEEEEe-CCEEEEecCCCCeEEEEEcCCCCceEEEecCCCCCceEE
Confidence            345677773 44566666777899999988887776665 333344543

>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}

Probab=98.90  E-value=1e-06  Score=74.02  Aligned_cols=245  Identities=8%  Similarity=-0.021  Sum_probs=144.4

Q ss_pred             cceEEEEeCC---ceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEEecC----C-eEEEEEccCC
Q psy10867         38 SPHSMCLLGN---DYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIE----T-KLHMWQISSG  109 (343)
Q Consensus        38 ~v~~~~~~~~---~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~d----~-~i~v~~~~~~  109 (343)
                      .+..++++|+   +.++++-.. +.|+.++..+++..... ........++++++|+++++...    . .+...+...+
T Consensus       140 ~P~gvavd~~s~~g~Lyv~D~~-~~I~~id~~~g~v~~~~-~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~  217 (433)
T 4hw6_A          140 NIWRMMFDPNSNYDDLYWVGQR-DAFRHVDFVNQYVDIKT-TNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASG  217 (433)
T ss_dssp             CCCEEEECTTTTTCEEEEECBT-SCEEEEETTTTEEEEEC-CCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGT
T ss_pred             CCceEEEccccCCCEEEEEeCC-CCEEEEECCCCEEEEee-cCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCC
Confidence            5779999984   777777665 78999999877655433 34556899999999996666432    1 2444443322


Q ss_pred             ce-EEEecccCCCeEEEEEec-CCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceE
Q psy10867        110 RL-LATASSHYQPITIVKWSA-DSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVT  187 (343)
Q Consensus       110 ~~-~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  187 (343)
                      .. ...+. .......++++| ++.++++-..++.|..+|..++.....+                   .. .+......
T Consensus       218 ~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~-------------------~~-~~~~~~~~  276 (433)
T 4hw6_A          218 FTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEE-------------------VM-MDTKGSNF  276 (433)
T ss_dssp             TCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEE-------------------EE-CSCCSSCE
T ss_pred             eecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEE-------------------ec-cCCCCCcc
Confidence            21 11121 223456788999 6766666667788999998765431111                   00 01112234


Q ss_pred             EEEeecCCCceEEEEeeCCCeEEEEecC--CCce--EEEeec----------------CCcEEEEEE---------cCCC
Q psy10867        188 HVTLSKLGAKSRVASVSHDRTCKIFDLC--TGED--LLSLIL----------------DTRLTCVAF---------DGTE  238 (343)
Q Consensus       188 ~~~~~~~~~~~~l~~~~~d~~i~~wd~~--~~~~--~~~~~~----------------~~~i~~~~~---------~~~~  238 (343)
                      .++++|+++ .++++-...+.|+.++..  +++.  ...+..                -.....+++         .+++
T Consensus       277 ~ia~dpdG~-~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g  355 (433)
T 4hw6_A          277 HIVWHPTGD-WAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEY  355 (433)
T ss_dssp             EEEECTTSS-EEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCE
T ss_pred             cEEEeCCCC-EEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCC
Confidence            699999983 255666667899998765  2321  111111                123677899         6777


Q ss_pred             CEEEEEcCCCcEEEEEeecccccccccccCCC-CC-------CccccccCcEEEEEEc-cCCCEEEEEeCCCcEEEEecc
Q psy10867        239 DNIYMGTSEGVIKSFCLRQVPRTRDHHIQDST-SN-------PDFIGHEKQVTSLSCS-ITGITLLSSSADETLKIWHTI  309 (343)
Q Consensus       239 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~-~~-------~~~~~~~~~v~~~~~s-~~~~~l~s~~~dg~i~iwd~~  309 (343)
                      .+.++-..++.|+.++... . ..... .... ..       ......-.....|+++ +++.++++-..++.|+.++++
T Consensus       356 ~lyvaD~~n~~I~~~~~~G-~-v~t~~-G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e  432 (433)
T 4hw6_A          356 DFYFCDRDSHTVRVLTPEG-R-VTTYA-GRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE  432 (433)
T ss_dssp             EEEEEETTTTEEEEECTTS-E-EEEEE-CCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred             cEEEEECCCCEEEEECCCC-C-EEEEE-eCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence            7776667778898887422 1 11100 0000 00       0000112347889999 677766666677788887764

>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A

Probab=98.90  E-value=1.6e-06  Score=69.25  Aligned_cols=202  Identities=15%  Similarity=0.238  Sum_probs=127.3

Q ss_pred             EEEEecCCeEEEEEccCCceEEEecccCCCeEEEEEecC----CC---EEEEec-C--CCeEEEeecC--ccceeeeeec
Q psy10867         92 YIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSAD----SN---FIVTGG-E--DGTICVWQLS--RLICKQTVAF  159 (343)
Q Consensus        92 ~l~~~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~----~~---~l~s~~-~--dg~i~iwd~~--~~~~~~~~~~  159 (343)
                      +|++...+.+.+||+ +|+.++.+..  +.+..+..-|+    ++   ++++.. .  +++|.+|++.  +.. ...+. 
T Consensus        43 ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~~i~-  117 (355)
T 3amr_A           43 LITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQSMT-  117 (355)
T ss_dssp             EEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EEECS-
T ss_pred             EEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-eeecc-
Confidence            344567789999999 8998888864  56777777663    22   223333 3  5789999774  321 11110 


Q ss_pred             CCCCCCCCccccccceeeeecccccceEEEEe--ecCCCceEEEEeeCCCeEEEEecC-------CCceEEEeecCCcEE
Q psy10867        160 GIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTL--SKLGAKSRVASVSHDRTCKIFDLC-------TGEDLLSLILDTRLT  230 (343)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~l~~~~~d~~i~~wd~~-------~~~~~~~~~~~~~i~  230 (343)
                                    ............+..+++  +|.....+++....+|.+..|++.       +.+.++++...+.+.
T Consensus       118 --------------~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~E  183 (355)
T 3amr_A          118 --------------DPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTE  183 (355)
T ss_dssp             --------------CTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEE
T ss_pred             --------------ccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcc
Confidence                          000000011155677787  664422468888889999999883       446678888888999


Q ss_pred             EEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCcc--ccccCcEEEEEE--ccCCC-EEEEEe-CCCcEE
Q psy10867        231 CVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDF--IGHEKQVTSLSC--SITGI-TLLSSS-ADETLK  304 (343)
Q Consensus       231 ~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~--s~~~~-~l~s~~-~dg~i~  304 (343)
                      .+...+....|+++-.+.-|..++.+......      ...+..+  ..-...+..|++  .++++ +|++++ .+.++.
T Consensus       184 gcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~------~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~  257 (355)
T 3amr_A          184 GMAADDEYGRLYIAEEDEAIWKFSAEPDGGSN------GTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYA  257 (355)
T ss_dssp             EEEEETTTTEEEEEETTTEEEEEECSTTSCSC------CEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEE
T ss_pred             eEEEcCCCCeEEEecccceEEEEeCCcCCCCC------ceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEE
Confidence            99999999999999998766666644322100      0001111  112235788887  45555 566555 677999


Q ss_pred             EEecc-cceeeeecc
Q psy10867        305 IWHTI-SRQCLRTIQ  318 (343)
Q Consensus       305 iwd~~-~~~~~~~~~  318 (343)
                      +||.. +.+.+..|.
T Consensus       258 Vydr~~~~~~vg~f~  272 (355)
T 3amr_A          258 IYDRQGKNKYVADFR  272 (355)
T ss_dssp             EEESSTTCCEEEEEE
T ss_pred             EEECCCCCcEEEEEE
Confidence            99996 677777775

>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}

Probab=98.88  E-value=2.7e-06  Score=71.50  Aligned_cols=235  Identities=7%  Similarity=-0.022  Sum_probs=134.5

Q ss_pred             ceEEEEECC-C-CCEEEEecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecC-CC----eEEEeecCccc
Q psy10867         80 RISSMQASP-D-AAYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGE-DG----TICVWQLSRLI  152 (343)
Q Consensus        80 ~v~~~~~s~-~-~~~l~~~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-dg----~i~iwd~~~~~  152 (343)
                      ....++++| + +.++++...+.|+.+|+.++....... .......++|+++++.|+.+.. ++    .+...+. .+.
T Consensus       138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~-~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g~  215 (430)
T 3tc9_A          138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYS-GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ESG  215 (430)
T ss_dssp             CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEEC-CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GGT
T ss_pred             CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEec-CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CCc
Confidence            456889997 3 455555444889999987765444333 4456789999999996555543 22    2333333 221


Q ss_pred             eeeeeecCCCCCCCCccccccceeeeecccccceEEEEeec-CCCceEEEEeeCCCeEEEEecCCCceEEEeec--CCcE
Q psy10867        153 CKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSK-LGAKSRVASVSHDRTCKIFDLCTGEDLLSLIL--DTRL  229 (343)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~--~~~i  229 (343)
                      ...                    ...+. .......++++| ++  .++++-..++.|..++...+........  ....
T Consensus       216 ~~~--------------------~~~l~-~~~~p~giavdp~~g--~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P  272 (430)
T 3tc9_A          216 FKV--------------------ITELT-KGQNCNGAETHPING--ELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWE  272 (430)
T ss_dssp             SCS--------------------EEEEE-ECSSCCCEEECTTTC--CEEEEETTTTEEEEEETTTTEEEEEEECSSSSCC
T ss_pred             eee--------------------eeeec-cCCCceEEEEeCCCC--EEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcc
Confidence            110                    01111 123456788999 56  6666666788999999876654232222  2457


Q ss_pred             EEEEEcCCCCEEEEE-cCCCcEEEEEeeccccc----ccccccCCCC-CCc---cccccCcEE-EEEEc--------cCC
Q psy10867        230 TCVAFDGTEDNIYMG-TSEGVIKSFCLRQVPRT----RDHHIQDSTS-NPD---FIGHEKQVT-SLSCS--------ITG  291 (343)
Q Consensus       230 ~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~----~~~~~~~~~~-~~~---~~~~~~~v~-~~~~s--------~~~  291 (343)
                      ..++|+|++++|+++ ...+.|..++.......    ..+.-..+.. ...   ....-.... .++..        +++
T Consensus       273 ~gia~~pdG~~lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g  352 (430)
T 3tc9_A          273 FHIQFHPSGNYAYIVVVNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEY  352 (430)
T ss_dssp             EEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCE
T ss_pred             eeEEEcCCCCEEEEEECCCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCC
Confidence            889999999966554 56788999887642110    0000000000 000   000111233 55553        346


Q ss_pred             CEEEEEeCCCcEEEEecccceeeeeccc------------------CCceEEEEEccCCCeeeeccc
Q psy10867        292 ITLLSSSADETLKIWHTISRQCLRTIQH------------------KGPVLGAFLGLLPPAIHDYDF  340 (343)
Q Consensus       292 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~------------------~~~v~~~~~sp~~~~l~~~~~  340 (343)
                      .++++-...+.|+.++ .+|+.......                  -.....++++|++..|+.++.
T Consensus       353 ~lyvaD~~n~~I~~i~-~~G~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~  418 (430)
T 3tc9_A          353 DFYFCDRENHCIRILT-PQGRVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDR  418 (430)
T ss_dssp             EEEEEEGGGTEEEEEC-TTSEEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEG
T ss_pred             eEEEEECCCcEEEEEC-CCCcEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEEC
Confidence            6666666778899988 45654333211                  125789999996566665543

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=98.87  E-value=2e-05  Score=65.31  Aligned_cols=217  Identities=6%  Similarity=-0.096  Sum_probs=135.2

Q ss_pred             CeEEEEecCCceEEEEEecCCCCcceEEEEeC-CceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCE-
Q psy10867         15 GAISVWEPKGGTLLMSYKGASVLSPHSMCLLG-NDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAY-   92 (343)
Q Consensus        15 g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~-   92 (343)
                      ..|+..++..++....+... . .+..++|.+ ++.++.+-...+.|..++.+.................+++.+.+.. 
T Consensus        96 ~~I~~i~~~~~~~~~~~~~~-~-~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~l  173 (386)
T 3v65_B           96 IDIRQVLPHRSEYTLLLNNL-E-NAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKL  173 (386)
T ss_dssp             SCEEEECTTSCCCEEEECSC-S-CEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEE
T ss_pred             ccceeeccCCCcEEEEecCC-C-ccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeE
Confidence            45777887665554444433 3 678999996 5677777767789999998876544333333334567888875544 


Q ss_pred             EEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEec-CC-CeEEEeecCccceeeeeecCCCCCCCCcc
Q psy10867         93 IAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGG-ED-GTICVWQLSRLICKQTVAFGIPGSSGKGV  169 (343)
Q Consensus        93 l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~~  169 (343)
                      +++ ...+.|.+.+++.......+.........+++.|.+..|+... .. +.|...++.....                
T Consensus       174 Y~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~----------------  237 (386)
T 3v65_B          174 YWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGR----------------  237 (386)
T ss_dssp             EEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC----------------
T ss_pred             EEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCc----------------
Confidence            444 4567899998875544444444445678999998666555444 33 6788887765321                


Q ss_pred             ccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCCEEEEEcCCC
Q psy10867        170 TGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIYMGTSEG  248 (343)
Q Consensus       170 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~  248 (343)
                            .......-.....++++|++. .+.++-+..+.|..+|+........+. .......+++. .+..+++-...+
T Consensus       238 ------~~~~~~~~~~PnGlavd~~~~-~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav~-~~~ly~td~~~~  309 (386)
T 3v65_B          238 ------RIIADTHLFWPNGLTIDYAGR-RMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVF-EDSLYWTDWHTK  309 (386)
T ss_dssp             ------EEEECSSCSCEEEEEEEGGGT-EEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEEE-TTEEEEEETTTT
T ss_pred             ------EEEEECCCCCeeeEEEeCCCC-EEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEEE-CCEEEEeeCCCC
Confidence                  111112234578999997653 566666677899999986433322222 23456777773 344555555677


Q ss_pred             cEEEEEeec
Q psy10867        249 VIKSFCLRQ  257 (343)
Q Consensus       249 ~i~i~d~~~  257 (343)
                      .|..++..+
T Consensus       310 ~V~~~~~~~  318 (386)
T 3v65_B          310 SINSANKFT  318 (386)
T ss_dssp             EEEEEETTT
T ss_pred             eEEEEECCC
Confidence            888877443

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=98.87  E-value=1.9e-05  Score=64.50  Aligned_cols=217  Identities=6%  Similarity=-0.091  Sum_probs=133.3

Q ss_pred             CeEEEEecCCceEEEEEecCCCCcceEEEEeC-CceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCC-E
Q psy10867         15 GAISVWEPKGGTLLMSYKGASVLSPHSMCLLG-NDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAA-Y   92 (343)
Q Consensus        15 g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~   92 (343)
                      ..|+..++........+... . .+..++|++ ++.++.+-...+.|..++++.................+++.+.+. +
T Consensus        53 ~~I~~i~~~g~~~~~~~~~~-~-~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~l  130 (349)
T 3v64_C           53 IDIRQVLPHRSEYTLLLNNL-E-NAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKL  130 (349)
T ss_dssp             SCEEEECTTSCCEEEEECSC-S-CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEE
T ss_pred             cceEEEeCCCCeeEEeecCC-C-ceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeE
Confidence            34777777655444434333 3 678999996 566777766668999999887654443333334557888887554 4


Q ss_pred             EEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEe-cCC-CeEEEeecCccceeeeeecCCCCCCCCcc
Q psy10867         93 IAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTG-GED-GTICVWQLSRLICKQTVAFGIPGSSGKGV  169 (343)
Q Consensus        93 l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~-~~d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~~  169 (343)
                      +.+ ...+.|.+.+++.......+.........+++.|.+..|+.. ... +.|...++......               
T Consensus       131 y~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~---------------  195 (349)
T 3v64_C          131 YWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRR---------------  195 (349)
T ss_dssp             EEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE---------------
T ss_pred             EEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcE---------------
Confidence            445 456799999987554443443344567899999865554444 344 67888887653111               


Q ss_pred             ccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCCEEEEEcCCC
Q psy10867        170 TGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIYMGTSEG  248 (343)
Q Consensus       170 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~  248 (343)
                             ......-.....++++|++. .+.++-+..+.|..+|+........+. .......+++. .+..+++-...+
T Consensus       196 -------~~~~~~~~~PnGla~d~~~~-~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav~-~~~ly~td~~~~  266 (349)
T 3v64_C          196 -------IIADTHLFWPNGLTIDYAGR-RMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVF-EDSLYWTDWHTK  266 (349)
T ss_dssp             -------ESCCSSCSCEEEEEEETTTT-EEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEE-TTEEEEEETTTT
T ss_pred             -------EEEECCCCCcceEEEeCCCC-EEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEEE-CCEEEEecCCCC
Confidence                   11112234578999998663 555666667899999986433322222 23456777773 344444555677


Q ss_pred             cEEEEEeec
Q psy10867        249 VIKSFCLRQ  257 (343)
Q Consensus       249 ~i~i~d~~~  257 (343)
                      .|..++..+
T Consensus       267 ~V~~~~~~~  275 (349)
T 3v64_C          267 SINSANKFT  275 (349)
T ss_dssp             EEEEEETTT
T ss_pred             eEEEEEccC
Confidence            787777433

>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A

Probab=98.86  E-value=9.5e-07  Score=78.72  Aligned_cols=256  Identities=9%  Similarity=-0.018  Sum_probs=139.0

Q ss_pred             eEEEEecCCceE--EEEEecCCCCcceEEEEeCCceEEEEEc-CCCeEEEEeCCCcccceecccCCcc-eEEEEECCCCC
Q psy10867         16 AISVWEPKGGTL--LMSYKGASVLSPHSMCLLGNDYVLGVEK-GKPMIQAWPVNSQEKAQLRLICPGR-ISSMQASPDAA   91 (343)
Q Consensus        16 ~i~iwd~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~i~iw~~~~~~~~~~~~~~~~~-v~~~~~s~~~~   91 (343)
                      .+.+||..+++-  +..+.........++++.+++++++.|+ .+..+.+||..+.+.......+..+ -.+++..++++
T Consensus       220 ~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~  299 (656)
T 1k3i_A          220 LTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGR  299 (656)
T ss_dssp             EEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSC
T ss_pred             EEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCe
Confidence            578899887653  2333332221344577888888887776 4468999998876654332212222 23455667888


Q ss_pred             EEEE-e-cC-----CeEEEEEccCCceEEEe----cccCCCeEEEEEecCCCEEEEecCCC---------eEEEeecCcc
Q psy10867         92 YIAV-S-IE-----TKLHMWQISSGRLLATA----SSHYQPITIVKWSADSNFIVTGGEDG---------TICVWQLSRL  151 (343)
Q Consensus        92 ~l~~-~-~d-----~~i~v~~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~l~s~~~dg---------~i~iwd~~~~  151 (343)
                      +++. | .+     ..+.+||..+++-...-    ......-....+..+++.++.|+.+|         .+..||..+.
T Consensus       300 iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~  379 (656)
T 1k3i_A          300 VFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGS  379 (656)
T ss_dssp             EEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTT
T ss_pred             EEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCc
Confidence            8887 4 23     46999999887644320    00000000011223455555554443         4667777664


Q ss_pred             ceeeeeecCCCCCCCCccccccceeeee----cccccceEEEEeec-CCCceEEEEeeCCC-----------eEEEEecC
Q psy10867        152 ICKQTVAFGIPGSSGKGVTGLTEPLHVK----SQHSLPVTHVTLSK-LGAKSRVASVSHDR-----------TCKIFDLC  215 (343)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~v~~~~~~~-~~~~~~l~~~~~d~-----------~i~~wd~~  215 (343)
                      .......                 ....    ......-.++.+.. ++  ++++.|+.++           .+.+||..
T Consensus       380 ~w~~~~~-----------------~~~~~~~~~~~~~~~~av~~~~~~~--~i~v~GG~~~~~~~~~~~~~~~v~~yd~~  440 (656)
T 1k3i_A          380 GDVKSAG-----------------KRQSNRGVAPDAMCGNAVMYDAVKG--KILTFGGSPDYQDSDATTNAHIITLGEPG  440 (656)
T ss_dssp             CEEEEEE-----------------ECEETTEECCCCBTCEEEEEETTTT--EEEEECCBSSSSSSBCCCCEEEEECCSTT
T ss_pred             ceeecCC-----------------ccccccccCCCCCCCceEeccCCCC--eEEEEeCCCCCCCCCcCCcceEEEcCCCC
Confidence            3221110                 0000    00011223444433 44  7888887543           68888887


Q ss_pred             CCceEEEe--e--cCCcEEEEEEcCCCCEEEEEcCC-----------CcEEEEEeecccccccccccCCCCCCccccccC
Q psy10867        216 TGEDLLSL--I--LDTRLTCVAFDGTEDNIYMGTSE-----------GVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEK  280 (343)
Q Consensus       216 ~~~~~~~~--~--~~~~i~~~~~~~~~~~l~~~~~d-----------~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (343)
                      +.+-....  .  ....-.+++..|+++.+++|+.+           ..+.+||..+..-..         +..+.....
T Consensus       441 ~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~---------~~~~~~~R~  511 (656)
T 1k3i_A          441 TSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYK---------QNPNSIVRV  511 (656)
T ss_dssp             SCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEE---------CCCCSSCCC
T ss_pred             CCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceee---------cCCCCCccc
Confidence            76654432  2  22223456677899999998754           468899986532110         111111122


Q ss_pred             cEEEEEEccCCCEEEEEeC
Q psy10867        281 QVTSLSCSITGITLLSSSA  299 (343)
Q Consensus       281 ~v~~~~~s~~~~~l~s~~~  299 (343)
                      ......+.|++++++.|+.
T Consensus       512 ~hs~a~ll~dg~v~v~GG~  530 (656)
T 1k3i_A          512 YHSISLLLPDGRVFNGGGG  530 (656)
T ss_dssp             TTEEEEECTTSCEEEEECC
T ss_pred             cccHhhcCCCcEEEecCCC
Confidence            2234456789999999885

>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}

Probab=98.84  E-value=1.2e-05  Score=67.62  Aligned_cols=230  Identities=7%  Similarity=-0.050  Sum_probs=125.8

Q ss_pred             CeEEEEecCCceEEEEEecCCCCcceEEEEeCCce-EEEEEcCCC----eEEEEeCCCcccc--eecccCCcceEEEEEC
Q psy10867         15 GAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDY-VLGVEKGKP----MIQAWPVNSQEKA--QLRLICPGRISSMQAS   87 (343)
Q Consensus        15 g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~~~----~i~iw~~~~~~~~--~~~~~~~~~v~~~~~s   87 (343)
                      +.|+.+|+.+++...... ... ....+++++++. ++++...++    .+..++. .+...  ..+. .......++++
T Consensus       159 ~~I~~id~~~~~v~~~~~-~~~-~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g~~~~~~~l~-~~~~p~giavd  234 (430)
T 3tc9_A          159 HPTRLIDFEKEYVSTVYS-GLS-KVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ESGFKVITELT-KGQNCNGAETH  234 (430)
T ss_dssp             EEEEEEETTTTEEEEEEC-CCS-CEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GGTSCSEEEEE-ECSSCCCEEEC
T ss_pred             CcEEEEECCCCEEEEEec-CCC-CcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CCceeeeeeec-cCCCceEEEEe
Confidence            677888876655443333 334 689999999987 555544222    2333333 33222  1221 22345678899


Q ss_pred             C-CCCEEEEe-cCCeEEEEEccCCceEEEec-ccCCCeEEEEEecCCCE-EEEecCCCeEEEeecCcc--ce--eeeeec
Q psy10867         88 P-DAAYIAVS-IETKLHMWQISSGRLLATAS-SHYQPITIVKWSADSNF-IVTGGEDGTICVWQLSRL--IC--KQTVAF  159 (343)
Q Consensus        88 ~-~~~~l~~~-~d~~i~v~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~-l~s~~~dg~i~iwd~~~~--~~--~~~~~~  159 (343)
                      | ++.++++. .++.|..++..++....... ........++|+|++++ +++-...+.|..++....  ..  ...+..
T Consensus       235 p~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag  314 (430)
T 3tc9_A          235 PINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDWKTKRLTTPYIVCG  314 (430)
T ss_dssp             TTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEE
T ss_pred             CCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCcccccccceEEEec
Confidence            9 67777764 56799999988665422222 12234678999999994 455556788999887642  11  111110


Q ss_pred             CCCCCCCCccccccceeeeecccccceE-EEEeecC------CCceEEEEeeCCCeEEEEecCCCceEEEeec-------
Q psy10867        160 GIPGSSGKGVTGLTEPLHVKSQHSLPVT-HVTLSKL------GAKSRVASVSHDRTCKIFDLCTGEDLLSLIL-------  225 (343)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~------~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~-------  225 (343)
                      . .+..+.. .    - ......-.... .+++.++      ..+.++++-...+.|+.++ .+++.......       
T Consensus       315 ~-~g~~g~~-d----g-~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~-~~G~v~~~~g~g~~~~~G  386 (430)
T 3tc9_A          315 Q-QGAKDWV-D----G-VGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILT-PQGRVTTFAGRGSNGTSG  386 (430)
T ss_dssp             C-TTCBCCB-C----E-EGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEEC-TTSEEEEEEECCTTSSSS
T ss_pred             c-CCCCCCC-C----C-CCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEEC-CCCcEEEEEeCCCCCCCc
Confidence            0 0000000 0    0 00000111233 4555431      1225666666678899888 45644333221       


Q ss_pred             --C---------CcEEEEEEcCC-CCEEEEEcCCCcEEEEEee
Q psy10867        226 --D---------TRLTCVAFDGT-EDNIYMGTSEGVIKSFCLR  256 (343)
Q Consensus       226 --~---------~~i~~~~~~~~-~~~l~~~~~d~~i~i~d~~  256 (343)
                        .         .....++++|+ +.++++-..+..|+.++++
T Consensus       387 ~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e  429 (430)
T 3tc9_A          387 YNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYE  429 (430)
T ss_dssp             CBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred             ccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence              1         14789999995 5455555567788887754

>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}

Probab=98.83  E-value=9.9e-06  Score=62.26  Aligned_cols=212  Identities=10%  Similarity=0.132  Sum_probs=127.5

Q ss_pred             cccCCcceEEEEECCCCCEEEE--ecCCeEEEEEccCCceEEEecc-cCCCeEEEEEecCCCEEEEecCCCeEEEeecCc
Q psy10867         74 RLICPGRISSMQASPDAAYIAV--SIETKLHMWQISSGRLLATASS-HYQPITIVKWSADSNFIVTGGEDGTICVWQLSR  150 (343)
Q Consensus        74 ~~~~~~~v~~~~~s~~~~~l~~--~~d~~i~v~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~  150 (343)
                      +.+-...+..++|.|++..|.+  ..++.|...|.. ++.+..+.- -....-.|++.+++.++++.-.++.+.++++..
T Consensus        22 l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~  100 (255)
T 3qqz_A           22 IAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTP  100 (255)
T ss_dssp             CTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECT
T ss_pred             CCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCC
Confidence            3355567999999998765554  456789999987 887777642 224678899998888777766778999998876


Q ss_pred             cceeeeeecCCCCCCCCccccccceee-e--ecccccceEEEEeecCCCceEEEEeeCCCeEEEEecC---CCceEEEee
Q psy10867        151 LICKQTVAFGIPGSSGKGVTGLTEPLH-V--KSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLC---TGEDLLSLI  224 (343)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~---~~~~~~~~~  224 (343)
                      ........                ... .  ..........++++|.+  +.|+++.+.....+|.++   ....+....
T Consensus       101 ~~~i~~~~----------------~~~~~~~~~~~N~g~EGLA~d~~~--~~L~va~E~~p~~i~~~~g~~~~~~l~i~~  162 (255)
T 3qqz_A          101 NSEVKILK----------------KIKIPLQESPTNCGFEGLAYSRQD--HTFWFFKEKNPIEVYKVNGLLSSNELHISK  162 (255)
T ss_dssp             TCCEEEEE----------------EEECCCSSCCCSSCCEEEEEETTT--TEEEEEEESSSEEEEEEESTTCSSCCEEEE
T ss_pred             CCeeeeee----------------eeccccccccccCCcceEEEeCCC--CEEEEEECcCCceEEEEcccccCCceeeec
Confidence            54321111                000 0  11234567899999988  455555554444555443   111122221


Q ss_pred             --------cCCcEEEEEEcCCCC-EEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEE
Q psy10867        225 --------LDTRLTCVAFDGTED-NIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLL  295 (343)
Q Consensus       225 --------~~~~i~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~  295 (343)
                              .-..+..++++|... +++.+..+..+..+|.... ......+..+  ...+...-.....|+|.++|++.+
T Consensus       163 ~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~-~~~~~~L~~g--~~~l~~~~~qpEGia~d~~G~lyI  239 (255)
T 3qqz_A          163 DKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGE-VIGEMSLTKG--SRGLSHNIKQAEGVAMDASGNIYI  239 (255)
T ss_dssp             CHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCC-EEEEEECSTT--GGGCSSCCCSEEEEEECTTCCEEE
T ss_pred             chhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCC-EEEEEEcCCc--cCCcccccCCCCeeEECCCCCEEE
Confidence                    123578999999755 4555666778888886643 2221111100  000101113567899999998555


Q ss_pred             EEeCCCcEEEEec
Q psy10867        296 SSSADETLKIWHT  308 (343)
Q Consensus       296 s~~~dg~i~iwd~  308 (343)
                      + ++.+.++.+.-
T Consensus       240 v-sE~n~~y~f~~  251 (255)
T 3qqz_A          240 V-SEPNRFYRFTP  251 (255)
T ss_dssp             E-ETTTEEEEEEC
T ss_pred             E-cCCceEEEEEe
Confidence            5 67776666653

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=98.82  E-value=1.9e-05  Score=63.40  Aligned_cols=225  Identities=11%  Similarity=-0.015  Sum_probs=137.3

Q ss_pred             CeEEEEeCCCccc-ceecccCCcceEEEEECCCCC-EEEE-ecCCeEEEEEccCCce-EEEecccCCCeEEEEEec-CCC
Q psy10867         58 PMIQAWPVNSQEK-AQLRLICPGRISSMQASPDAA-YIAV-SIETKLHMWQISSGRL-LATASSHYQPITIVKWSA-DSN  132 (343)
Q Consensus        58 ~~i~iw~~~~~~~-~~~~~~~~~~v~~~~~s~~~~-~l~~-~~d~~i~v~~~~~~~~-~~~~~~~~~~v~~~~~~~-~~~  132 (343)
                      ..|+..+++.... .............++|.+.+. ++.+ ...+.|+.+++..+.. ...+.........+++.+ .++
T Consensus        13 ~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~   92 (318)
T 3sov_A           13 RDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEK   92 (318)
T ss_dssp             EEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTE
T ss_pred             CeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCe
Confidence            5799999887642 222222334577899998554 4445 3567999999876632 112222223466888987 445


Q ss_pred             EEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEe-eCCCeEEE
Q psy10867        133 FIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASV-SHDRTCKI  211 (343)
Q Consensus       133 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~-~~d~~i~~  211 (343)
                      ++++-...+.|.++++......                      ............+++.|.+. .++.+- +..+.|..
T Consensus        93 ly~~d~~~~~I~~~~~dG~~~~----------------------~l~~~~~~~P~giavdp~~g-~ly~td~~~~~~I~r  149 (318)
T 3sov_A           93 LYWTDSETNRIEVSNLDGSLRK----------------------VLFWQELDQPRAIALDPSSG-FMYWTDWGEVPKIER  149 (318)
T ss_dssp             EEEEETTTTEEEEEETTSCSCE----------------------EEECSSCSSEEEEEEEGGGT-EEEEEECSSSCEEEE
T ss_pred             EEEEECCCCEEEEEECCCCcEE----------------------EEEeCCCCCccEEEEeCCCC-EEEEEecCCCCEEEE
Confidence            5556566788999998753211                      11123345578999998652 444443 23578888


Q ss_pred             EecCCCceEEEee--cCCcEEEEEEcCCCCEEEEEc-CCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEc
Q psy10867        212 FDLCTGEDLLSLI--LDTRLTCVAFDGTEDNIYMGT-SEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCS  288 (343)
Q Consensus       212 wd~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s  288 (343)
                      .++.. .....+.  .-.....++++|++..|+.+. ..+.|..+|+....... +          ..+.......+++.
T Consensus       150 ~~~dG-~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~-~----------~~~~~~~P~glav~  217 (318)
T 3sov_A          150 AGMDG-SSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQA-V----------VKGSLPHPFALTLF  217 (318)
T ss_dssp             EETTS-CSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE-E----------ECSCCSCEEEEEEE
T ss_pred             EEcCC-CCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEE-E----------ecCCCCCceEEEEe
Confidence            88753 3333332  234578999999877777664 56789999886422111 0          11123456677775


Q ss_pred             cCCCEEEEEeCCCcEEEEecccceeeeecc
Q psy10867        289 ITGITLLSSSADETLKIWHTISRQCLRTIQ  318 (343)
Q Consensus       289 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~  318 (343)
                      . +.++++-...+.|..++..+|+....+.
T Consensus       218 ~-~~lywtd~~~~~V~~~~~~~G~~~~~i~  246 (318)
T 3sov_A          218 E-DILYWTDWSTHSILACNKYTGEGLREIH  246 (318)
T ss_dssp             T-TEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred             C-CEEEEEecCCCeEEEEECCCCCceEEEe
Confidence            3 4555566677889999987787665554

>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}

Probab=98.79  E-value=1.7e-05  Score=66.70  Aligned_cols=230  Identities=10%  Similarity=-0.012  Sum_probs=126.9

Q ss_pred             CeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCC---C-eEEEEeCCCcccceecccCCcceEEEEECC-C
Q psy10867         15 GAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGK---P-MIQAWPVNSQEKAQLRLICPGRISSMQASP-D   89 (343)
Q Consensus        15 g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~---~-~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~-~   89 (343)
                      +.|+.+|..+++..... .... .+..+++++++.++++....   . .+...+...+...............+++.| +
T Consensus       162 ~~I~~id~~~g~v~~~~-~~~~-~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~~~~~P~giavd~~~  239 (433)
T 4hw6_A          162 DAFRHVDFVNQYVDIKT-TNIG-QCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGFTERLSLCNARGAKTCAVHPQN  239 (433)
T ss_dssp             SCEEEEETTTTEEEEEC-CCCS-CEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTTCCEEEEEECSSBCCCEECTTT
T ss_pred             CCEEEEECCCCEEEEee-cCCC-CccEEEECCCCCEEEEcCCCCcccceEEEEECCCCeeccccccccCCCCEEEEeCCC
Confidence            56777777666554433 3333 68999999999866665421   1 233333222111001111223456788999 6


Q ss_pred             CCEEEEe-cCCeEEEEEccCCceEEEe-c-ccCCCeEEEEEecCCCEE-EEecCCCeEEEeecCc--ccee--eeeecCC
Q psy10867         90 AAYIAVS-IETKLHMWQISSGRLLATA-S-SHYQPITIVKWSADSNFI-VTGGEDGTICVWQLSR--LICK--QTVAFGI  161 (343)
Q Consensus        90 ~~~l~~~-~d~~i~v~~~~~~~~~~~~-~-~~~~~v~~~~~~~~~~~l-~s~~~dg~i~iwd~~~--~~~~--~~~~~~~  161 (343)
                      +.++++. .++.|+.++..++.....+ . +....-..++|+|+++.| ++-...+.|..++...  +...  ..+.. .
T Consensus       240 G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag-~  318 (433)
T 4hw6_A          240 GKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCG-Q  318 (433)
T ss_dssp             CCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEE-C
T ss_pred             CeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEe-c
Confidence            7776664 5678999998877662222 2 112223579999999844 4555678899987653  2111  11100 0


Q ss_pred             CCCCCCccccccceeeeecccccceEEEEe---------ecCCCceEEEEeeCCCeEEEEecCCCceEEEeec-------
Q psy10867        162 PGSSGKGVTGLTEPLHVKSQHSLPVTHVTL---------SKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLIL-------  225 (343)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~---------~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~-------  225 (343)
                      .+..+.. ..     ......-.....+++         .+++  .++++-...+.|+.++. ++........       
T Consensus       319 ~g~~g~~-dg-----~~~~a~~~~P~giav~~n~~y~~dd~~g--~lyvaD~~n~~I~~~~~-~G~v~t~~G~g~~~~~G  389 (433)
T 4hw6_A          319 HSSPGWV-DG-----MGTGARLWGPNQGIFVKNEAYAGEEDEY--DFYFCDRDSHTVRVLTP-EGRVTTYAGRGNSREWG  389 (433)
T ss_dssp             TTCCCCB-CE-----EGGGSBCSSEEEEEEEECGGGTTSSCCE--EEEEEETTTTEEEEECT-TSEEEEEECCCTTCSSC
T ss_pred             CCCCccC-CC-----cccceEEcCCccEEEEccccccccCCCC--cEEEEECCCCEEEEECC-CCCEEEEEeCCCCCccc
Confidence            0000000 00     000111234667888         5555  67777777889999984 5543322211       


Q ss_pred             -----------CCcEEEEEEc-CCCCEEEEEcCCCcEEEEEee
Q psy10867        226 -----------DTRLTCVAFD-GTEDNIYMGTSEGVIKSFCLR  256 (343)
Q Consensus       226 -----------~~~i~~~~~~-~~~~~l~~~~~d~~i~i~d~~  256 (343)
                                 -.....++++ +++.++++-..++.|+.++++
T Consensus       390 ~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e  432 (433)
T 4hw6_A          390 YVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE  432 (433)
T ss_dssp             CBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred             cCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence                       1236789999 555555555567788887764

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=98.79  E-value=3.2e-05  Score=62.20  Aligned_cols=223  Identities=7%  Similarity=-0.097  Sum_probs=137.4

Q ss_pred             EEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCC-ceEEEEEcCCCeEEEEeCCC----cccceecccCCcce
Q psy10867          7 VAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGN-DYVLGVEKGKPMIQAWPVNS----QEKAQLRLICPGRI   81 (343)
Q Consensus         7 ~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~i~iw~~~~----~~~~~~~~~~~~~v   81 (343)
                      ++|+..  ..|+..|+.+.+....+... . .+..++|++. +.++.+....+.|..+++.+    ..............
T Consensus         4 ll~~~~--~~I~~i~~~~~~~~~~~~~~-~-~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p   79 (316)
T 1ijq_A            4 LFFTNR--HEVRKMTLDRSEYTSLIPNL-R-NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAP   79 (316)
T ss_dssp             EEEECB--SSEEEEETTSCCCEEEECSC-S-SEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCC
T ss_pred             EEEECC--CeEEEEECCCcceEehhcCC-C-ceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCc
Confidence            455554  45889999877665555443 3 6789999985 57777776678999999876    22222222222456


Q ss_pred             EEEEECCCC-CEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecC-C-CeEEEeecCccceeeee
Q psy10867         82 SSMQASPDA-AYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGE-D-GTICVWQLSRLICKQTV  157 (343)
Q Consensus        82 ~~~~~s~~~-~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-d-g~i~iwd~~~~~~~~~~  157 (343)
                      ..+++.+.+ ++.++ ...+.|.+++++.......+.........+++.|.+..|+.+.. . +.|...++..... .  
T Consensus        80 ~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~-~--  156 (316)
T 1ijq_A           80 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI-Y--  156 (316)
T ss_dssp             CEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCE-E--
T ss_pred             CEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCe-E--
Confidence            788888644 44445 46789999998754443333333456789999986665554443 2 6788887754311 1  


Q ss_pred             ecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-c---CCcEEEEE
Q psy10867        158 AFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-L---DTRLTCVA  233 (343)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~---~~~i~~~~  233 (343)
                                         ......-.....+++++++. .++++-+..+.|..+|+... ....+. .   ......++
T Consensus       157 -------------------~~~~~~~~~P~gla~d~~~~-~lY~~D~~~~~I~~~d~dg~-~~~~~~~~~~~~~~P~gia  215 (316)
T 1ijq_A          157 -------------------SLVTENIQWPNGITLDLLSG-RLYWVDSKLHSISSIDVNGG-NRKTILEDEKRLAHPFSLA  215 (316)
T ss_dssp             -------------------EEECSSCSCEEEEEEETTTT-EEEEEETTTTEEEEEETTSC-SCEEEEECTTTTSSEEEEE
T ss_pred             -------------------EEEECCCCCceEEEEeccCC-EEEEEECCCCeEEEEecCCC-ceEEEeecCCccCCcEEEE
Confidence                               11112334678999998763 55556666789999998643 333332 1   23466777


Q ss_pred             EcCCCCEEEEEcCCCcEEEEEeecc
Q psy10867        234 FDGTEDNIYMGTSEGVIKSFCLRQV  258 (343)
Q Consensus       234 ~~~~~~~l~~~~~d~~i~i~d~~~~  258 (343)
                      +. .+..+++-...+.|..++..+.
T Consensus       216 v~-~~~ly~~d~~~~~V~~~~~~~g  239 (316)
T 1ijq_A          216 VF-EDKVFWTDIINEAIFSANRLTG  239 (316)
T ss_dssp             EE-TTEEEEEETTTTEEEEEETTTC
T ss_pred             EE-CCEEEEEECCCCeEEEEeCCCC
Confidence            75 3445555556778888886543

>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}

Probab=98.77  E-value=2.1e-06  Score=77.72  Aligned_cols=193  Identities=12%  Similarity=0.121  Sum_probs=107.3

Q ss_pred             ceEEEEEC-CCCCEEEEe--cC----CeEEEEEccCC-ceEE-EecccCCCeEEEEEecCCCEEEEecCC-----CeEEE
Q psy10867         80 RISSMQAS-PDAAYIAVS--IE----TKLHMWQISSG-RLLA-TASSHYQPITIVKWSADSNFIVTGGED-----GTICV  145 (343)
Q Consensus        80 ~v~~~~~s-~~~~~l~~~--~d----~~i~v~~~~~~-~~~~-~~~~~~~~v~~~~~~~~~~~l~s~~~d-----g~i~i  145 (343)
                      .+...+|| |||++||-+  .+    ..|+++|+.++ +.+. .+.   .....+.|+||++.|+....+     ..|.+
T Consensus       175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~  251 (751)
T 2xe4_A          175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVWR  251 (751)
T ss_dssp             EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEEEE
T ss_pred             EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCCCEEEE
Confidence            67889999 999988842  22    25999999988 6321 111   113468899999888776654     35777


Q ss_pred             eecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEee---CCCeEEEEecCCCc-eE-
Q psy10867        146 WQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVS---HDRTCKIFDLCTGE-DL-  220 (343)
Q Consensus       146 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~---~d~~i~~wd~~~~~-~~-  220 (343)
                      +++.+......                  .+.. .........+.|+|++  ++|+..+   ....|+++|+.++. .. 
T Consensus       252 ~~lgt~~~~~~------------------lv~~-~~~~~~~~~~~~SpDg--~~l~~~~~~~~~~~l~~~d~~~~~~~~~  310 (751)
T 2xe4_A          252 HVMGKLQSEDV------------------CLYE-EHNPLFSAFMYKAADT--NTLCIGSQSPETAEVHLLDLRKGNAHNT  310 (751)
T ss_dssp             EETTSCGGGCE------------------EEEE-CCCTTCEEEEEECTTS--SEEEEEEECSSCEEEEEEESSSCTTCCC
T ss_pred             EECCCCchhcE------------------EEEe-cCCCceEEEEEECCCC--CEEEEEecCCCCceEEEEECCCCCCCce
Confidence            78766432110                  1111 1222345678999999  5665544   24568889988763 22 


Q ss_pred             -EEee--cCCcEEEEEEcCCCCEEEEEcCC--C--cEEEEEeecccccccccccCCCCCCc-cccccC--cEEEEEEccC
Q psy10867        221 -LSLI--LDTRLTCVAFDGTEDNIYMGTSE--G--VIKSFCLRQVPRTRDHHIQDSTSNPD-FIGHEK--QVTSLSCSIT  290 (343)
Q Consensus       221 -~~~~--~~~~i~~~~~~~~~~~l~~~~~d--~--~i~i~d~~~~~~~~~~~~~~~~~~~~-~~~~~~--~v~~~~~s~~  290 (343)
                       ..+.  ......++.|+..+.+++....+  +  .|..+|+.....           ... +..+..  .+..+.+. .
T Consensus       311 ~~~l~~~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~-----------~~~~li~~~~~~~l~~~~~~-~  378 (751)
T 2xe4_A          311 LEIVRPREKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQPSD-----------WSHVLVDHSEDVFMESIAVR-S  378 (751)
T ss_dssp             EEESSCCCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTSTTC-----------CCCEEECCCSSEEEEEEEEC-S
T ss_pred             eEEeecCCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCccc-----------ceeeEECCCCCcEEEEEEEE-C
Confidence             3332  23345555555433344444433  3  455555442111           112 222332  34455554 2


Q ss_pred             CCEEEEEeCCCc--EEEEec
Q psy10867        291 GITLLSSSADET--LKIWHT  308 (343)
Q Consensus       291 ~~~l~s~~~dg~--i~iwd~  308 (343)
                      +.++++...++.  |+++++
T Consensus       379 ~~lv~~~~~~g~~~l~~~dl  398 (751)
T 2xe4_A          379 NYLVVAGRRAGLTRIWTMMA  398 (751)
T ss_dssp             SEEEEEEEETTEEEEEEEEC
T ss_pred             CEEEEEEEeCCEEEEEEEec
Confidence            345567777775  455564

>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}

Probab=98.72  E-value=6e-05  Score=61.53  Aligned_cols=239  Identities=8%  Similarity=-0.048  Sum_probs=127.2

Q ss_pred             CcceEEEEECCCCCEEEEecCCeEEEEEccCCce--EEEec---ccCCCeEEEEEecC---CCEEEEecC-C-----CeE
Q psy10867         78 PGRISSMQASPDAAYIAVSIETKLHMWQISSGRL--LATAS---SHYQPITIVKWSAD---SNFIVTGGE-D-----GTI  143 (343)
Q Consensus        78 ~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~--~~~~~---~~~~~v~~~~~~~~---~~~l~s~~~-d-----g~i  143 (343)
                      -.....++|.|+|+++++...+.|++++  +++.  +..+.   ........|+++|+   +..|+.+.. .     +.|
T Consensus        30 l~~P~~ia~~pdG~l~V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v  107 (352)
T 2ism_A           30 LEVPWALAFLPDGGMLIAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQV  107 (352)
T ss_dssp             CSCEEEEEECTTSCEEEEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEE
T ss_pred             CCCceEEEEcCCCeEEEEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEE
Confidence            3456799999999988887779999998  4432  22221   12356789999998   444444332 2     567


Q ss_pred             EEeecCccceeeeeecCCCCCCCCccccccceeeeec---ccccceEEEEeecCCCceEEEEeeC-------------CC
Q psy10867        144 CVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKS---QHSLPVTHVTLSKLGAKSRVASVSH-------------DR  207 (343)
Q Consensus       144 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~l~~~~~-------------d~  207 (343)
                      ..++..........                ..+..+.   ........++|.|++  .++++.+.             .+
T Consensus       108 ~r~~~~~~~~~~~~----------------~l~~~~p~~~~~~h~~~~l~~~pdG--~Lyv~~G~~~~~~~~~d~~~~~g  169 (352)
T 2ism_A          108 VRLRHLGERGVLDR----------------VVLDGIPARPHGLHSGGRIAFGPDG--MLYVTTGEVYERELAQDLASLGG  169 (352)
T ss_dssp             EEEEECSSCEEEEE----------------EEEEEECCCTTCCCCCCCEEECTTS--CEEEECCCTTCGGGGGCTTCSSS
T ss_pred             EEEEeCCCCcCceE----------------EEEEeCCCCCCCCcCCceEEECCCC--CEEEEECCCCCCccccCCCCCce
Confidence            77777643211000                0111111   111233689999998  56665432             25


Q ss_pred             eEEEEecCC--------------CceEEEeecCCcEEEEEEcC-CCCEEEEEcCCCcE------EEEEeecccccc----
Q psy10867        208 TCKIFDLCT--------------GEDLLSLILDTRLTCVAFDG-TEDNIYMGTSEGVI------KSFCLRQVPRTR----  262 (343)
Q Consensus       208 ~i~~wd~~~--------------~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~i------~i~d~~~~~~~~----  262 (343)
                      .|.-++...              ...+... .......++|+| ++.++++-.....+      .+.-+.......    
T Consensus       170 ~I~ri~~dG~~p~~npf~~~~~~~~~i~a~-G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~  248 (352)
T 2ism_A          170 KILRLTPEGEPAPGNPFLGRRGARPEVYSL-GHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRV  248 (352)
T ss_dssp             EEEEECTTSSBCTTCTTTTCTTSCTTEEEE-CCSEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTC
T ss_pred             EEEEEcCCCCCCCCCcccCCCCCCccEEEE-cCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcc
Confidence            666666542              0111111 223467789999 55544443222221      122222211000    


Q ss_pred             cc---cccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEeccccee------eee-cccCCceEEEEEccCC
Q psy10867        263 DH---HIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQC------LRT-IQHKGPVLGAFLGLLP  332 (343)
Q Consensus       263 ~~---~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~------~~~-~~~~~~v~~~~~sp~~  332 (343)
                      ..   ......+...+. +......++| .+|.++++.-..+.|...+++....      ... +.....+..+++.|||
T Consensus       249 ~g~~~~~~~~~p~~~~~-~~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG  326 (352)
T 2ism_A          249 VGRGNDPRYRDPLYFWP-QGFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDG  326 (352)
T ss_dssp             CSCCCCTTSCCCSEECT-TCCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTS
T ss_pred             cCCCCCCCCcCCeEecC-CCCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCC
Confidence            00   000011222332 2335677888 5677776666677788777764421      112 2234678999999999


Q ss_pred             Ceeeecc
Q psy10867        333 PAIHDYD  339 (343)
Q Consensus       333 ~~l~~~~  339 (343)
                      ...++..
T Consensus       327 ~lyv~~~  333 (352)
T 2ism_A          327 ALYVTTS  333 (352)
T ss_dssp             CEEEEEC
T ss_pred             cEEEEEe
Confidence            7766643

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=98.71  E-value=7.4e-05  Score=62.16  Aligned_cols=219  Identities=7%  Similarity=-0.116  Sum_probs=134.5

Q ss_pred             CeEEEEecCCceEEEEEecCCCCcceEEEEeC-CceEEEEEcCCCeEEEEeCCCcc----cceecccCCcceEEEEECCC
Q psy10867         15 GAISVWEPKGGTLLMSYKGASVLSPHSMCLLG-NDYVLGVEKGKPMIQAWPVNSQE----KAQLRLICPGRISSMQASPD   89 (343)
Q Consensus        15 g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~i~iw~~~~~~----~~~~~~~~~~~v~~~~~s~~   89 (343)
                      ..|+..++........+.. .. .+..++|++ ++.+..+-...+.|+.+++....    ..............+++.+.
T Consensus        92 ~~I~~i~l~~~~~~~~~~~-~~-~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~  169 (400)
T 3p5b_L           92 HEVRKMTLDRSEYTSLIPN-LR-NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI  169 (400)
T ss_dssp             TEEEEECTTSCSCEEEECS-CS-CEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETT
T ss_pred             ceeEEEccCCcceeEeccc-cC-cceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEec
Confidence            5788888876654444443 33 788999997 46666666666889999887632    22233234456788999874


Q ss_pred             -CCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecC--CCeEEEeecCccceeeeeecCCCCCC
Q psy10867         90 -AAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGE--DGTICVWQLSRLICKQTVAFGIPGSS  165 (343)
Q Consensus        90 -~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~  165 (343)
                       +++.++ ...+.|.+.+++.......+.........|++.|.+..|+....  .+.|...++.....            
T Consensus       170 ~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~------------  237 (400)
T 3p5b_L          170 HSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI------------  237 (400)
T ss_dssp             TTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSC------------
T ss_pred             CCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCcc------------
Confidence             445555 45679999998765544444444456789999996665555442  36788888765321            


Q ss_pred             CCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeec---CCcEEEEEEcCCCCEEE
Q psy10867        166 GKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLIL---DTRLTCVAFDGTEDNIY  242 (343)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~---~~~i~~~~~~~~~~~l~  242 (343)
                                .......-.....|++++++. .+.++-+..+.|..+|+...........   -.....+++. .+..++
T Consensus       238 ----------~~~~~~~l~~P~glavd~~~~-~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lyw  305 (400)
T 3p5b_L          238 ----------YSLVTENIQWPNGITLDLLSG-RLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFW  305 (400)
T ss_dssp             ----------EEEECSSCSCEEEEEEETTTT-EEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEE
T ss_pred             ----------EEEEECCCCceEEEEEEeCCC-EEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEE
Confidence                      111122335678999998763 4555556678999999865433222222   2345566663 234444


Q ss_pred             EEcCCCcEEEEEeeccc
Q psy10867        243 MGTSEGVIKSFCLRQVP  259 (343)
Q Consensus       243 ~~~~d~~i~i~d~~~~~  259 (343)
                      +-...+.|..+|..++.
T Consensus       306 td~~~~~V~~~~~~~G~  322 (400)
T 3p5b_L          306 TDIINEAIFSANRLTGS  322 (400)
T ss_dssp             EESSSCSEEEEESSSCC
T ss_pred             ecCCCCeEEEEEcCCCC
Confidence            55567788888855443

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=98.71  E-value=0.00011  Score=66.34  Aligned_cols=227  Identities=9%  Similarity=-0.065  Sum_probs=136.3

Q ss_pred             CeEEEEeCCCcccceecccCCcceEEEEECCCCCE-EEE-ecCCeEEEEEccCC----ceEEEecccCCCeEEEEEecCC
Q psy10867         58 PMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAY-IAV-SIETKLHMWQISSG----RLLATASSHYQPITIVKWSADS  131 (343)
Q Consensus        58 ~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~-l~~-~~d~~i~v~~~~~~----~~~~~~~~~~~~v~~~~~~~~~  131 (343)
                      ..|+..++......... .....+..++|.+.+.. +.+ ...+.|+.+++...    .....+.........|++.+.+
T Consensus       404 ~~Ir~i~l~~~~~~~l~-~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~  482 (791)
T 3m0c_C          404 HEVRKMTLDRSEYTSLI-PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIH  482 (791)
T ss_dssp             SSEEEECTTSCCCEEEE-CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTT
T ss_pred             cceeEeeccCCcceeee-cCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecC
Confidence            46888888766544433 34566789999885544 445 35678999998753    2233343344556789998866


Q ss_pred             C-EEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeC-CCeE
Q psy10867        132 N-FIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSH-DRTC  209 (343)
Q Consensus       132 ~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~-d~~i  209 (343)
                      . ++++-...+.|.+.++......                      ............|++.|... .++++-.. .+.|
T Consensus       483 ~~LY~tD~~~~~I~v~~ldG~~~~----------------------~l~~~~l~~P~gIaVDp~~g-~LYwtD~g~~~~I  539 (791)
T 3m0c_C          483 SNIYWTDSVLGTVSVADTKGVKRK----------------------TLFRENGSKPRAIVVDPVHG-FMYWTDWGTPAKI  539 (791)
T ss_dssp             TEEEEEETTTTEEEEEETTSSSEE----------------------EEEECTTCCEEEEEEETTTT-EEEEEECSSSCEE
T ss_pred             CcEEEEecCCCeEEEEeCCCCeEE----------------------EEEeCCCCCcceEEEecCCC-CEEEecCCCCCeE
Confidence            4 5555566789999998754211                      11122334578999999752 44444323 3789


Q ss_pred             EEEecCCCceEEEeec-CCcEEEEEEcCCCCEEEEEc-CCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEE
Q psy10867        210 KIFDLCTGEDLLSLIL-DTRLTCVAFDGTEDNIYMGT-SEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSC  287 (343)
Q Consensus       210 ~~wd~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  287 (343)
                      ...++........+.. -.....|++++.+..|+.+. ..+.|..+++.........         .-...-....+|++
T Consensus       540 ~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~---------~~~~~l~~P~glav  610 (791)
T 3m0c_C          540 KKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTIL---------EDEKRLAHPFSLAV  610 (791)
T ss_dssp             EEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE---------ECTTTTSSEEEEEE
T ss_pred             EEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEe---------cCCCccCCCCEEEE
Confidence            8888764433332222 35688999998888777764 4567888887653221110         00011223456666


Q ss_pred             ccCCCEEEEEeCCCcEEEEecccceeeeecc
Q psy10867        288 SITGITLLSSSADETLKIWHTISRQCLRTIQ  318 (343)
Q Consensus       288 s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~  318 (343)
                      .. ++++++-...+.|...|..+|+.+..+.
T Consensus       611 ~~-~~lYwtD~~~~~I~~~dk~tG~~~~~l~  640 (791)
T 3m0c_C          611 FE-DKVFWTDIINEAIFSANRLTGSDVNLLA  640 (791)
T ss_dssp             ET-TEEEEEETTTTEEEEEETTTCCCCEEEE
T ss_pred             eC-CEEEEEECCCCEEEEEeCCCCcceEEee
Confidence            43 3445555566788888877776665554

>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}

Probab=98.71  E-value=3.9e-06  Score=75.94  Aligned_cols=131  Identities=9%  Similarity=0.012  Sum_probs=77.4

Q ss_pred             eEEEEecCCc-eEEEE-EecCCCCcceEEEEeCCceEEEEEcCC-----CeEEEEeCCCcccc--eecc-cCCcceEEEE
Q psy10867         16 AISVWEPKGG-TLLMS-YKGASVLSPHSMCLLGNDYVLGVEKGK-----PMIQAWPVNSQEKA--QLRL-ICPGRISSMQ   85 (343)
Q Consensus        16 ~i~iwd~~~~-~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~~~~-----~~i~iw~~~~~~~~--~~~~-~~~~~v~~~~   85 (343)
                      .|+++|+.++ +.+.. +.   . ....++|+||++.|+....+     ..|.++++.+++..  .++. ........+.
T Consensus       202 ~l~v~dl~~g~~~l~~~~~---~-~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~  277 (751)
T 2xe4_A          202 TIEFKRISDPSQTIADKVS---G-TNGEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMY  277 (751)
T ss_dssp             EEEEEETTCTTCCCCCCEE---E-ECSCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEE
T ss_pred             EEEEEECCCCCEeCCcccc---C-ceeeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEE
Confidence            4899999888 63211 11   1 23578899998544443332     26788888776532  2221 2233467889


Q ss_pred             ECCCCCEEEE-e---cCCeEEEEEccCC--ce--EEEecccCCCeEEEEEecCCCEEEEecCC----CeEEEeecCc
Q psy10867         86 ASPDAAYIAV-S---IETKLHMWQISSG--RL--LATASSHYQPITIVKWSADSNFIVTGGED----GTICVWQLSR  150 (343)
Q Consensus        86 ~s~~~~~l~~-~---~d~~i~v~~~~~~--~~--~~~~~~~~~~v~~~~~~~~~~~l~s~~~d----g~i~iwd~~~  150 (343)
                      |+|||++|+. +   ....|+++|+.++  +.  ........+....+.|+..+.+++....+    ..|..+++.+
T Consensus       278 ~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~  354 (751)
T 2xe4_A          278 KAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQ  354 (751)
T ss_dssp             ECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTS
T ss_pred             ECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCC
Confidence            9999998885 3   2347899999876  33  33333445556666665444444444433    3566666654

>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}

Probab=98.67  E-value=8.1e-05  Score=60.15  Aligned_cols=230  Identities=11%  Similarity=0.070  Sum_probs=126.8

Q ss_pred             cceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecc---cCCcceEEEEECCCCCEEEEecCCeEEEEEccCCce-EE
Q psy10867         38 SPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRL---ICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRL-LA  113 (343)
Q Consensus        38 ~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~---~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~-~~  113 (343)
                      .+.++.+.| +.+++++.. +.|.. ..+.++.-....   .+++.+..+.+.+++.+++++.++.|.. ..+.|+. ..
T Consensus        81 ~~~~i~~~~-~~~~~~g~~-g~i~~-S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~v~~-S~DgG~tW~~  156 (327)
T 2xbg_A           81 RFNSVSFQG-NEGWIVGEP-PIMLH-TTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMITNVGAIYR-TKDSGKNWQA  156 (327)
T ss_dssp             EEEEEEEET-TEEEEEEET-TEEEE-ESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEETTCCEEE-ESSTTSSEEE
T ss_pred             cEEEEEecC-CeEEEEECC-CeEEE-ECCCCCCceECccccCCCCCeEEEEEECCCCEEEEeCCccEEE-EcCCCCCCEE
Confidence            678999987 556666655 64443 223333222111   2345678888877888888776765432 2223432 22


Q ss_pred             EecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeec
Q psy10867        114 TASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSK  193 (343)
Q Consensus       114 ~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  193 (343)
                      ........+..+.+.+++.+++.+...+..+-+|-. +..                   ++.+  .......+..+.+.+
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~g-G~t-------------------W~~~--~~~~~~~~~~~~~~~  214 (327)
T 2xbg_A          157 LVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPG-QTA-------------------WEPH--NRTTSRRLHNMGFTP  214 (327)
T ss_dssp             EECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTT-CSS-------------------CEEE--ECCSSSCEEEEEECT
T ss_pred             eecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCC-CCc-------------------eeEC--CCCCCCccceeEECC
Confidence            233455678999999988877776554333333321 111                   0111  122445678888888


Q ss_pred             CCCceEEEEeeCCCeEEEEecCCCceEEEeec-----CCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccC
Q psy10867        194 LGAKSRVASVSHDRTCKIFDLCTGEDLLSLIL-----DTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQD  268 (343)
Q Consensus       194 ~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~-----~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~  268 (343)
                      ++  .+ +.++.+|.+++.+...++.-..+..     ...+..+.+.+++..++++. ++.|. +...... ....    
T Consensus       215 ~g--~~-~~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i~-~S~DgG~-tW~~----  284 (327)
T 2xbg_A          215 DG--RL-WMIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGALL-CSQDGGQ-TWQQ----  284 (327)
T ss_dssp             TS--CE-EEEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCEE-EESSTTS-SCEE----
T ss_pred             CC--CE-EEEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeC-CCeEE-EeCCCCc-ccEE----
Confidence            77  44 4555678877764232333222221     23588999998877766654 66552 3322221 1110    


Q ss_pred             CCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEe
Q psy10867        269 STSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWH  307 (343)
Q Consensus       269 ~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd  307 (343)
                         +.........+..+.|.++++ +++++.+|.|.-++
T Consensus       285 ---~~~~~~~~~~~~~v~~~~~~~-~~~~G~~G~i~~~~  319 (327)
T 2xbg_A          285 ---DVDVKKVPSNFYKILFFSPDQ-GFILGQKGILLRYV  319 (327)
T ss_dssp             ---CGGGTTSSSCCCEEEEEETTE-EEEECSTTEEEEEC
T ss_pred             ---cCccCCCCCCeEEEEEECCCc-eEEEcCCceEEEEc
Confidence               111111234567888876554 66667788777665

>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}

Probab=98.62  E-value=0.00012  Score=59.69  Aligned_cols=238  Identities=13%  Similarity=0.074  Sum_probs=123.6

Q ss_pred             cceEEEEeCCceEEEEEcCCCeEEEEeCCCcccc--e---ecccCCcceEEEEECCC---C-CEEEE-ecC-----CeEE
Q psy10867         38 SPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKA--Q---LRLICPGRISSMQASPD---A-AYIAV-SIE-----TKLH  102 (343)
Q Consensus        38 ~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~--~---~~~~~~~~v~~~~~s~~---~-~~l~~-~~d-----~~i~  102 (343)
                      ....++|.|+|+++++-.. |.|.+++  +++..  .   ...........++|+|+   + .+.++ ...     +.|.
T Consensus        32 ~P~~ia~~pdG~l~V~e~~-g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~  108 (352)
T 2ism_A           32 VPWALAFLPDGGMLIAERP-GRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVV  108 (352)
T ss_dssp             CEEEEEECTTSCEEEEETT-TEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEE
T ss_pred             CceEEEEcCCCeEEEEeCC-CeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEE
Confidence            6789999999998887766 9999998  33321  1   11122456889999998   4 44444 222     6788


Q ss_pred             EEEccCCce------EEEec---ccCCCeEEEEEecCCCEEEEecCC-------------CeEEEeecCccceeeeeecC
Q psy10867        103 MWQISSGRL------LATAS---SHYQPITIVKWSADSNFIVTGGED-------------GTICVWQLSRLICKQTVAFG  160 (343)
Q Consensus       103 v~~~~~~~~------~~~~~---~~~~~v~~~~~~~~~~~l~s~~~d-------------g~i~iwd~~~~~~~~~~~~~  160 (343)
                      .++...+..      +..+.   ........++|.|+|.+.++.+..             |.|..++....     +...
T Consensus       109 r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~-----~p~~  183 (352)
T 2ism_A          109 RLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGE-----PAPG  183 (352)
T ss_dssp             EEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSS-----BCTT
T ss_pred             EEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCC-----CCCC
Confidence            888765421      11232   111223689999999876664432             34544444321     0000


Q ss_pred             CCCCCCCccccccceeeeecccccceEEEEeec-CCCceEEEEeeCCCe--------EEEEecCCCc-------------
Q psy10867        161 IPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSK-LGAKSRVASVSHDRT--------CKIFDLCTGE-------------  218 (343)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~l~~~~~d~~--------i~~wd~~~~~-------------  218 (343)
                      .+....   ......+ ...++ .....++|+| ++  .++++-...+.        |.+.  ..+.             
T Consensus       184 npf~~~---~~~~~~i-~a~G~-rnp~g~a~d~~~g--~l~v~d~g~~~~~~~~~dei~~i--~~G~nyGwp~~~g~~~~  254 (352)
T 2ism_A          184 NPFLGR---RGARPEV-YSLGH-RNPQGLAWHPKTG--ELFSSEHGPSGEQGYGHDEVNLI--VPGGNYGWPRVVGRGND  254 (352)
T ss_dssp             CTTTTC---TTSCTTE-EEECC-SEECCCEECTTTC--CEEEEEECC------CCCEEEEE--CTTCBCCTTTCCSCCCC
T ss_pred             CcccCC---CCCCccE-EEEcC-CCcccEEEECCCC--CEEEEEcCCCCCCCCCCeEEEEe--ccCCcCCCCcccCCCCC
Confidence            000000   0000011 11223 2356788998 55  44444322222        3332  2222             


Q ss_pred             -----eEEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCE
Q psy10867        219 -----DLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGIT  293 (343)
Q Consensus       219 -----~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~  293 (343)
                           +...+........++| .++..+++....+.|...++..........    . ...+......+..+++.|||.+
T Consensus       255 ~~~~~p~~~~~~~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~----~-~~~~~~~~~rp~~v~~~pdG~l  328 (352)
T 2ism_A          255 PRYRDPLYFWPQGFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVL----R-VETALSGFGRLREVQVGPDGAL  328 (352)
T ss_dssp             TTSCCCSEECTTCCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEE----E-EEEEEESSCCEEEEEECTTSCE
T ss_pred             CCCcCCeEecCCCCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeec----c-hheecccCCCeeEEEECCCCcE
Confidence                 2222322334667777 456666666667788888877543210000    0 0011112356889999999986


Q ss_pred             EEEEe
Q psy10867        294 LLSSS  298 (343)
Q Consensus       294 l~s~~  298 (343)
                      +++..
T Consensus       329 yv~~~  333 (352)
T 2ism_A          329 YVTTS  333 (352)
T ss_dssp             EEEEC
T ss_pred             EEEEe
Confidence            66653

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*

Probab=98.61  E-value=0.00024  Score=62.64  Aligned_cols=235  Identities=9%  Similarity=-0.051  Sum_probs=146.0

Q ss_pred             CCceEEEEEcCCCeEEEEeCCCcccceecc-cCCcceEEEEECCCCCEEE-E-ecCCeEEEEEccCCceEEEecccCCCe
Q psy10867         46 GNDYVLGVEKGKPMIQAWPVNSQEKAQLRL-ICPGRISSMQASPDAAYIA-V-SIETKLHMWQISSGRLLATASSHYQPI  122 (343)
Q Consensus        46 ~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~-~-~~d~~i~v~~~~~~~~~~~~~~~~~~v  122 (343)
                      |...++.+ .. ..|+..++++........ .....+..++|.+.+..|. + ..++.|+.++++.......+.......
T Consensus         5 p~~~Ll~s-~~-~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P   82 (628)
T 4a0p_A            5 PEAFLLFS-RR-ADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYP   82 (628)
T ss_dssp             CCCEEEEE-ET-TEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCC
T ss_pred             CCcEEEEE-eC-CcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCc
Confidence            44445554 44 689999998765432222 2345688999998665555 4 357899999987654444443333456


Q ss_pred             EEEEEecCCC-EEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEE
Q psy10867        123 TIVKWSADSN-FIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVA  201 (343)
Q Consensus       123 ~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~  201 (343)
                      ..+++.+.+. +.++-...+.|.+.++......                      ......-.....+++.|... .+++
T Consensus        83 ~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~----------------------~l~~~~l~~P~~iavdp~~G-~lY~  139 (628)
T 4a0p_A           83 EGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQ----------------------VLVWKDLDSPRALALDPAEG-FMYW  139 (628)
T ss_dssp             CEEEEETTTTEEEEEETTTTEEEEEETTSTTCE----------------------EEECSSCCCEEEEEEETTTT-EEEE
T ss_pred             ceEEEEeCCCEEEEEECCCCEEEEEecCCCcEE----------------------EEEeCCCCCcccEEEccCCC-eEEE
Confidence            7889987554 4455556788999998754211                      11112334568999998542 4444


Q ss_pred             Ee-eCCCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEc-CCCcEEEEEeecccccccccccCCCCCCcccccc
Q psy10867        202 SV-SHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGT-SEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHE  279 (343)
Q Consensus       202 ~~-~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~  279 (343)
                      +- +..+.|...++...........-.....++++++++.|+.+. ..+.|..+|+..... .           .+....
T Consensus       140 tD~g~~~~I~r~~~dG~~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~-----------v~~~~l  207 (628)
T 4a0p_A          140 TEWGGKPKIDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-E-----------VIADDL  207 (628)
T ss_dssp             EECSSSCEEEEEETTSCSCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-E-----------EEEECC
T ss_pred             eCCCCCCEEEEEeCCCCceEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-E-----------EeeccC
Confidence            43 235778888876544433333445688999999888777764 467888888865322 1           122223


Q ss_pred             CcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc
Q psy10867        280 KQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ  318 (343)
Q Consensus       280 ~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~  318 (343)
                      .....+++.. +.++++-...+.|...|..+|+....+.
T Consensus       208 ~~P~glav~~-~~ly~tD~~~~~I~~~dk~tg~~~~~l~  245 (628)
T 4a0p_A          208 PHPFGLTQYQ-DYIYWTDWSRRSIERANKTSGQNRTIIQ  245 (628)
T ss_dssp             SCEEEEEEET-TEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred             CCceEEEEEC-CEEEEecCCCCEEEEEECCCCCceEEEe
Confidence            3456788765 4555565567889989877776554443

>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A

Probab=98.60  E-value=0.00011  Score=58.70  Aligned_cols=198  Identities=11%  Similarity=0.118  Sum_probs=123.2

Q ss_pred             ccceEEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCce-------EEEEE-cC--CCeEEEEeCC--Cccc
Q psy10867          3 LLNEVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDY-------VLGVE-KG--KPMIQAWPVN--SQEK   70 (343)
Q Consensus         3 ~v~~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~-------~~~~~-~~--~~~i~iw~~~--~~~~   70 (343)
                      +-.++++..+.++-+.+||+ +|+.++.+..  + .++.+..-|+-.       ++++. ..  +++|.+|++.  +++ 
T Consensus        38 p~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g-~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-  112 (355)
T 3amr_A           38 PQNSKLITTNKKSGLVVYSL-DGKMLHSYNT--G-KLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-  112 (355)
T ss_dssp             GGGCEEEEEETTTEEEEEET-TSCEEEEECC--S-CEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-
T ss_pred             CCccEEEEEcCCCCEEEEcC-CCcEEEEccC--C-CcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-
Confidence            34566777788899999999 8999998875  3 567777666321       33444 33  5799999663  333 


Q ss_pred             ceeccc------CC-cceEEEEE--CCC-CC-EEE-EecCCeEEEEEcc-------CCceEEEecccCCCeEEEEEecCC
Q psy10867         71 AQLRLI------CP-GRISSMQA--SPD-AA-YIA-VSIETKLHMWQIS-------SGRLLATASSHYQPITIVKWSADS  131 (343)
Q Consensus        71 ~~~~~~------~~-~~v~~~~~--s~~-~~-~l~-~~~d~~i~v~~~~-------~~~~~~~~~~~~~~v~~~~~~~~~  131 (343)
                      +.....      .. ..+..+++  +|. ++ ++. +..+|.+..|++.       +.+.++++.. .+.+..+...+..
T Consensus       113 l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~  191 (355)
T 3amr_A          113 LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDEY  191 (355)
T ss_dssp             EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETTT
T ss_pred             eeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCCC
Confidence            322211      11 45666777  774 44 333 4678999999883       2355666654 3568889999888


Q ss_pred             CEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeee--cccccceEEEEee--cCCCceEEEEee-CC
Q psy10867        132 NFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVK--SQHSLPVTHVTLS--KLGAKSRVASVS-HD  206 (343)
Q Consensus       132 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~--~~~~~~~l~~~~-~d  206 (343)
                      ..|+.+-++..|..++.+......                 .+.+...  ..-...+..|++.  +++. .+|++++ .+
T Consensus       192 g~Lyv~eEd~GIw~~da~p~~~~~-----------------~~~v~~~~~g~l~aDvEGLai~~~~~g~-gyLivSsQG~  253 (355)
T 3amr_A          192 GRLYIAEEDEAIWKFSAEPDGGSN-----------------GTVIDRADGRHLTRDIEGLTIYYAADGK-GYLMASSQGN  253 (355)
T ss_dssp             TEEEEEETTTEEEEEECSTTSCSC-----------------CEEEEEBSSSSBCSCEEEEEEEECGGGC-EEEEEEEGGG
T ss_pred             CeEEEecccceEEEEeCCcCCCCC-----------------ceEEEEecCCccccCcceEEEEecCCCC-EEEEEEcCCC
Confidence            899999998766666644221000                 0122221  1222467888884  4443 2455544 57


Q ss_pred             CeEEEEecC-CCceEEEee
Q psy10867        207 RTCKIFDLC-TGEDLLSLI  224 (343)
Q Consensus       207 ~~i~~wd~~-~~~~~~~~~  224 (343)
                      +++.+||.+ +.+.+..+.
T Consensus       254 ~s~~Vydr~~~~~~vg~f~  272 (355)
T 3amr_A          254 SSYAIYDRQGKNKYVADFR  272 (355)
T ss_dssp             TEEEEEESSTTCCEEEEEE
T ss_pred             CEEEEEECCCCCcEEEEEE
Confidence            899999986 556666554

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*

Probab=98.60  E-value=0.00026  Score=62.36  Aligned_cols=314  Identities=9%  Similarity=-0.009  Sum_probs=166.3

Q ss_pred             EecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCC-ceEEEEEcC-CCeEEEEeCCCcccceecccCCcceEEEEE
Q psy10867          9 FSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGN-DYVLGVEKG-KPMIQAWPVNSQEKAQLRLICPGRISSMQA   86 (343)
Q Consensus         9 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~-~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~   86 (343)
                      ++-.+.+.|.+.++........+...-. .+..|++.|. |.++.+-.. .+.|...+++...........-...+.+++
T Consensus       100 ~~d~~~~~I~v~~~dG~~~~~l~~~~l~-~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glal  178 (619)
T 3s94_A          100 WTDSETNRIEVSNLDGSLRKVLFWQELD-QPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTL  178 (619)
T ss_dssp             EEETTTTEEEEEETTSCSCEEEECSSCS-CCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEEEE
T ss_pred             EEeCCCCEEEEEECCCCCEEEEEeCCCC-CCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEEEE
Confidence            3333467888888754333222333444 7889999986 556555432 357777777654433333233456789999


Q ss_pred             CCCCCEEEE--ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCC-
Q psy10867         87 SPDAAYIAV--SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPG-  163 (343)
Q Consensus        87 s~~~~~l~~--~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~-  163 (343)
                      .+++..|..  ...+.|...+++.........+.......+++.++ ..+++-...+.|...|..+++....+...... 
T Consensus       179 d~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~-~ly~td~~~~~V~~~d~~tg~~~~~i~~~~~~p  257 (619)
T 3s94_A          179 DYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED-ILYWTDWSTHSILACNKYTGEGLREIHSDIFSP  257 (619)
T ss_dssp             ETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSS-EEEEECTTTCSEEEEESSSCCCCEECCSCCCCC
T ss_pred             EccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCC-EEEEecCCCCEEEEEECCCCcccEEEecCCCCC
Confidence            987665554  45678999988644332222212222346777654 45555556778988888776544333211100 


Q ss_pred             -------------CCCCcc--ccccceeeeecccccceEEEEeecCC-------------CceEEEEeeCCCeEEEEecC
Q psy10867        164 -------------SSGKGV--TGLTEPLHVKSQHSLPVTHVTLSKLG-------------AKSRVASVSHDRTCKIFDLC  215 (343)
Q Consensus       164 -------------~~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~-------------~~~~l~~~~~d~~i~~wd~~  215 (343)
                                   ......  ...-..+.........-.|.  +|.|             +..+|+.+ ..+.|+..++.
T Consensus       258 ~~i~v~~~~~qp~~~n~C~~~ng~Cs~lCl~~~~~~~~~C~--C~~g~~l~~d~~~C~~~~~~~Ll~~-~~~~i~~i~l~  334 (619)
T 3s94_A          258 MDIHAFSQQRQPNATNPCGIDNGGCSHLCLMSPVKPFYQCA--CPTGVKLLENGKTCKDGATELLLLA-RRTDLRRISLD  334 (619)
T ss_dssp             SEEEECCGGGSCCCCCTTTTTGGGCSSEEEECSSTTSEEEE--CCTTCCBCTTSSCBCSSCSEEEEEE-ESSCEEEEESS
T ss_pred             cEEEEEccccCCCccccccCCCCcccceEECCCCCCCceEe--CCchheecccCcccCCCCceEEEEE-cccceEEEecC
Confidence                         000000  00001111111111111221  2221             11233333 34567777776


Q ss_pred             CCceE-EEee--cCCcEEEEEEcCCCCEEEEEc-CCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccC-
Q psy10867        216 TGEDL-LSLI--LDTRLTCVAFDGTEDNIYMGT-SEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSIT-  290 (343)
Q Consensus       216 ~~~~~-~~~~--~~~~i~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-  290 (343)
                      ..... ..+.  .-..+..++|++.+..|+.+. ..+.|+.+++.......           .....-..+..+++.+. 
T Consensus       335 ~~~~~~~~~~~~~l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~-----------v~~~~~~~p~GlAvD~~~  403 (619)
T 3s94_A          335 TPDFTDIVLQLEDIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQF-----------VVTAQIAHPDGIAVDWVA  403 (619)
T ss_dssp             STTCCCEECCCSCCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE-----------EECSSCSCCCEEEEETTT
T ss_pred             CCccceeEEeccccCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEE-----------EEECCCCCcCceEEeccc
Confidence            55421 1122  234578899999777666654 57788888876532111           11112245678999874 


Q ss_pred             CCEEEEEeCCCcEEEEecccceeeeecc--cCCceEEEEEccCCCeeeecc
Q psy10867        291 GITLLSSSADETLKIWHTISRQCLRTIQ--HKGPVLGAFLGLLPPAIHDYD  339 (343)
Q Consensus       291 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~--~~~~v~~~~~sp~~~~l~~~~  339 (343)
                      +++.++-+..+.|.+.++... ....+.  ......++++.|...+|+.++
T Consensus       404 ~~lY~tD~~~~~I~v~~~~G~-~~~~l~~~~l~~P~~iavdp~~G~ly~tD  453 (619)
T 3s94_A          404 RNLYWTDTGTDRIEVTRLNGT-MRKILISEDLEEPRAIVLDPMVGYMYWTD  453 (619)
T ss_dssp             TEEEEEETTTTEEEEEETTSC-SCEEEECTTCCSEEEEEEETTTTEEEEEE
T ss_pred             CcEEEEeCCCCcEEEEeCCCC-eEEEEEECCCCCeeeEEEEcCCCcEEEec
Confidence            445556666788999987643 333332  445688999999766665544

>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}

Probab=98.59  E-value=9.7e-05  Score=62.45  Aligned_cols=263  Identities=10%  Similarity=0.002  Sum_probs=143.2

Q ss_pred             ceEEEEeCC--ceEEEEEcCCCeEEEEeCCCcccceeccc---CCcceEEEEE-------CCCCCEEE-EecCC------
Q psy10867         39 PHSMCLLGN--DYVLGVEKGKPMIQAWPVNSQEKAQLRLI---CPGRISSMQA-------SPDAAYIA-VSIET------   99 (343)
Q Consensus        39 v~~~~~~~~--~~~~~~~~~~~~i~iw~~~~~~~~~~~~~---~~~~v~~~~~-------s~~~~~l~-~~~d~------   99 (343)
                      ...|+|+|.  +.++++....+.|++.|++++........   .......++|       ++++..|. +...+      
T Consensus       141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~  220 (496)
T 3kya_A          141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDES  220 (496)
T ss_dssp             EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGE
T ss_pred             CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccC
Confidence            468999983  56666665556899999888776543322   2235899999       99998444 43322      


Q ss_pred             -eEEEEEccC-CceE-----EEecccCCCeEEEEEec-CCCEEEEecCCCeEEEeecC-------ccceeeeeecCCCCC
Q psy10867        100 -KLHMWQISS-GRLL-----ATASSHYQPITIVKWSA-DSNFIVTGGEDGTICVWQLS-------RLICKQTVAFGIPGS  164 (343)
Q Consensus       100 -~i~v~~~~~-~~~~-----~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~-------~~~~~~~~~~~~~~~  164 (343)
                       .|.+++... +...     ..+.... ....++++| ++.++++-..++.|..+|+.       ++..........   
T Consensus       221 ~~V~~i~r~~~G~~~~~~~~~~v~~~~-~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~---  296 (496)
T 3kya_A          221 PSVYIIKRNADGTFDDRSDIQLIAAYK-QCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNN---  296 (496)
T ss_dssp             EEEEEEECCTTSCCSTTSCEEEEEEES-CCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGC---
T ss_pred             ceEEEEecCCCCceeecccceeeccCC-CceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccc---
Confidence             366665443 2221     2222222 345778899 45556666778899999997       332200000000   


Q ss_pred             CCCccccccceeeeecccccceEEEEeecCCCce-EEEEeeCCCeEEEEecC--CCce--EEEeec----C---------
Q psy10867        165 SGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKS-RVASVSHDRTCKIFDLC--TGED--LLSLIL----D---------  226 (343)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~~~~~d~~i~~wd~~--~~~~--~~~~~~----~---------  226 (343)
                           ....+.+.. .+.......++|+|++  + ++++-+....|+.++..  ++..  ...+..    .         
T Consensus       297 -----~g~~~~l~~-~~~~~~p~~ia~~p~G--~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~  368 (496)
T 3kya_A          297 -----PNTFKQLFT-IADPSWEFQIFIHPTG--KYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTE  368 (496)
T ss_dssp             -----TTTEEEEEE-CSSSSCCEEEEECTTS--SEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGG
T ss_pred             -----ccccceeEe-cCCCCCceEEEEcCCC--CEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccc
Confidence                 000001111 1223456799999999  5 45555677889986653  3221  011211    0         


Q ss_pred             ---CcEE-EEEEc-------CCCCEEEEEcCCCcEEEEEeecccccccccccCCCC--------C------CccccccCc
Q psy10867        227 ---TRLT-CVAFD-------GTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTS--------N------PDFIGHEKQ  281 (343)
Q Consensus       227 ---~~i~-~~~~~-------~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~--------~------~~~~~~~~~  281 (343)
                         .... .++..       +++.++++-..+..|+.++... . ...+. ..+..        .      ......-..
T Consensus       369 a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~~G-~-v~Tia-G~g~~~~~~~~~~~G~~dG~~~~~a~f~~  445 (496)
T 3kya_A          369 ARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVTPEG-I-VSTYA-GRGASTSLADGNQWGTDDGDLREVARFRD  445 (496)
T ss_dssp             CBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEECTTC-B-EEEEE-ESCTTHHHHHSCSCCCCCEETTTTCCCSS
T ss_pred             cccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEeCCC-C-EEEEe-cccccccccCccccccCCCCchhhhhcCC
Confidence               1234 45554       4556666666788898887322 1 11110 00000        0      000111235


Q ss_pred             EEEEEEccC-CCEEEEEeCCCcEEEEecccceeeee
Q psy10867        282 VTSLSCSIT-GITLLSSSADETLKIWHTISRQCLRT  316 (343)
Q Consensus       282 v~~~~~s~~-~~~l~s~~~dg~i~iwd~~~~~~~~~  316 (343)
                      ...|+++++ +.++++=..+..|+.++++.......
T Consensus       446 P~gIavd~~~g~lyVaD~~N~rIrki~~~~~~~~~~  481 (496)
T 3kya_A          446 VSGLVYDDVKEMFYVHDQVGHTIRTISMEQEENVAG  481 (496)
T ss_dssp             EEEEEEETTTTEEEEEETTTTEEEEEEECCCC----
T ss_pred             CcEEEEECCCCEEEEEeCCCCEEEEEECCCCccccc
Confidence            788999997 77777777788999999876554443

>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}

Probab=98.57  E-value=0.00016  Score=58.34  Aligned_cols=260  Identities=11%  Similarity=-0.034  Sum_probs=142.3

Q ss_pred             cceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceec-c---cCCcceEEEEECCCCCEEEEecCCeEEEEEccCCceEE
Q psy10867         38 SPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLR-L---ICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLA  113 (343)
Q Consensus        38 ~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~-~---~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~  113 (343)
                      .+.++.|.+++..++++.. |.| +...+.++.-... .   .....+..+.|.+ +..++++..+.|.. ..+.|+.-.
T Consensus        37 ~~~~v~~~~~~~~~~~G~~-g~i-~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~~~~~~g~~g~i~~-S~DgG~tW~  112 (327)
T 2xbg_A           37 TILDMSFIDRHHGWLVGVN-ATL-METRDGGQTWEPRTLVLDHSDYRFNSVSFQG-NEGWIVGEPPIMLH-TTDGGQSWS  112 (327)
T ss_dssp             CEEEEEESSSSCEEEEETT-TEE-EEESSTTSSCEECCCCCSCCCCEEEEEEEET-TEEEEEEETTEEEE-ESSTTSSCE
T ss_pred             cEEEEEECCCCcEEEEcCC-CeE-EEeCCCCCCCeECCCCCCCCCccEEEEEecC-CeEEEEECCCeEEE-ECCCCCCce
Confidence            7899999887777777765 755 3333333221111 1   1244688999986 56666677775544 333343322


Q ss_pred             Eec---ccCCCeEEEEEecCCCEEEEecCCCeEE-EeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEE
Q psy10867        114 TAS---SHYQPITIVKWSADSNFIVTGGEDGTIC-VWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHV  189 (343)
Q Consensus       114 ~~~---~~~~~v~~~~~~~~~~~l~s~~~dg~i~-iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  189 (343)
                      ...   .+.+.+..+.+.+++..++.+. +|.|. -.|  .+..-.                   .+  .......+..+
T Consensus       113 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~g~v~~S~D--gG~tW~-------------------~~--~~~~~~~~~~~  168 (327)
T 2xbg_A          113 QIPLDPKLPGSPRLIKALGNGSAEMITN-VGAIYRTKD--SGKNWQ-------------------AL--VQEAIGVMRNL  168 (327)
T ss_dssp             ECCCCTTCSSCEEEEEEEETTEEEEEET-TCCEEEESS--TTSSEE-------------------EE--ECSCCCCEEEE
T ss_pred             ECccccCCCCCeEEEEEECCCCEEEEeC-CccEEEEcC--CCCCCE-------------------Ee--ecCCCcceEEE
Confidence            222   2335577888877777666654 45442 222  121111                   11  12334567889


Q ss_pred             EeecCCCceEEEEeeCCCeEEEEec--CCCceEEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeeccccccccccc
Q psy10867        190 TLSKLGAKSRVASVSHDRTCKIFDL--CTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQ  267 (343)
Q Consensus       190 ~~~~~~~~~~l~~~~~d~~i~~wd~--~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~  267 (343)
                      .+.+++  .+++.+...+..+-.|-  .+-+.+ .......+..+.+.+++..+++ +.+|.+++.+......-..    
T Consensus       169 ~~~~~~--~~~~~g~~G~~~~S~d~gG~tW~~~-~~~~~~~~~~~~~~~~g~~~~~-~~~G~~~~s~~D~G~tW~~----  240 (327)
T 2xbg_A          169 NRSPSG--EYVAVSSRGSFYSTWEPGQTAWEPH-NRTTSRRLHNMGFTPDGRLWMI-VNGGKIAFSDPDNSENWGE----  240 (327)
T ss_dssp             EECTTS--CEEEEETTSSEEEEECTTCSSCEEE-ECCSSSCEEEEEECTTSCEEEE-ETTTEEEEEETTEEEEECC----
T ss_pred             EEcCCC--cEEEEECCCcEEEEeCCCCCceeEC-CCCCCCccceeEECCCCCEEEE-eCCceEEEecCCCCCeeEe----
Confidence            999877  66665544443444442  222222 1224567889999998876654 4577777663211111000    


Q ss_pred             CCCCCCcc-ccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc----cCCceEEEEEccCCCeeeecc
Q psy10867        268 DSTSNPDF-IGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ----HKGPVLGAFLGLLPPAIHDYD  339 (343)
Q Consensus       268 ~~~~~~~~-~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~----~~~~v~~~~~sp~~~~l~~~~  339 (343)
                          +..- ..+...+..+.+.+++.+++++ .+|.| ++....|+.-..+.    ....+.++.|.++++.++++.
T Consensus       241 ----~~~~~~~~~~~~~~v~~~~~~~~~~~g-~~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~~~~~G~  311 (327)
T 2xbg_A          241 ----LLSPLRRNSVGFLDLAYRTPNEVWLAG-GAGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQGFILGQ  311 (327)
T ss_dssp             ----CBCTTSSCCSCEEEEEESSSSCEEEEE-STTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETTEEEEECS
T ss_pred             ----ccCCcccCCcceEEEEecCCCEEEEEe-CCCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCCceEEEcC
Confidence                0000 0122358889999887766665 46766 34444454433333    235678898987776665543

>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1

Probab=98.56  E-value=0.00019  Score=58.74  Aligned_cols=217  Identities=10%  Similarity=0.159  Sum_probs=142.5

Q ss_pred             CCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEE
Q psy10867         14 SGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYI   93 (343)
Q Consensus        14 dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l   93 (343)
                      ...|.|-|+..+..+.+-.-..    -+.-.+|..+++|.-.. .++.|+|+++.+.++...- ...|.-=.|- +.+.|
T Consensus        47 ~~~vvIiDl~~~~~~~rrpi~A----dsAIMnP~~~iiALrag-~~lQiFnle~K~klks~~~-~e~VvfWkWi-s~~~l  119 (494)
T 1bpo_A           47 QAQVVIIDMNDPSNPIRRPISA----DSAIMNPASKVIALKAG-KTLQIFNIEMKSKMKAHTM-TDDVTFWKWI-SLNTV  119 (494)
T ss_dssp             CCEEEEEETTSTTSCEEEECCC----SEEEECSSSSCEEEEET-TEEEEEETTTTEEEEEEEC-SSCCCEEEEE-ETTEE
T ss_pred             CCeEEEEECCCCCcceeccccc----ceeeeCCCCcEEEEecC-CeEEEEchHHhhhhcceec-CCCceEEEec-CCCeE
Confidence            4577788877654433222221    24556888888888776 8999999999887765543 3355555665 34556


Q ss_pred             EEecCCeEEEEEccC-CceEEEecccC----CCeEEEEEecCCCEEEEec-------CCCeEEEeecCccceeeeeecCC
Q psy10867         94 AVSIETKLHMWQISS-GRLLATASSHY----QPITIVKWSADSNFIVTGG-------EDGTICVWQLSRLICKQTVAFGI  161 (343)
Q Consensus        94 ~~~~d~~i~v~~~~~-~~~~~~~~~~~----~~v~~~~~~~~~~~l~s~~-------~dg~i~iwd~~~~~~~~~~~~~~  161 (343)
                      +--.+..|+-|++.. ..+.+.+..|.    ..|..-..+++.++++..+       -.|.+.+|..+..          
T Consensus       120 ~lVT~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~----------  189 (494)
T 1bpo_A          120 ALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK----------  189 (494)
T ss_dssp             EEECSSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC----------
T ss_pred             EEEcCCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccc----------
Confidence            666688999999974 35666666553    3566666778888776543       2467888888775          


Q ss_pred             CCCCCCccccccceeeeecccccceEEEEeecCCCc-eEEEEeeC---CCeEEEEecCCC---c-----eEEEeec----
Q psy10867        162 PGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAK-SRVASVSH---DRTCKIFDLCTG---E-----DLLSLIL----  225 (343)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~l~~~~~---d~~i~~wd~~~~---~-----~~~~~~~----  225 (343)
                                   .-+.+++|......+.+..+... .+++.+..   .+.+++-++...   .     ....+..    
T Consensus       190 -------------~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~  256 (494)
T 1bpo_A          190 -------------VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEA  256 (494)
T ss_dssp             -------------CEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTS
T ss_pred             -------------ccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCccc
Confidence                         55667788776665555432211 33444433   278999988543   1     1111111    


Q ss_pred             -CCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccc
Q psy10867        226 -DTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPR  260 (343)
Q Consensus       226 -~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~  260 (343)
                       ..-..++..++....++.-+.-|.|++||+.+...
T Consensus       257 ~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~  292 (494)
T 1bpo_A          257 QNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTC  292 (494)
T ss_dssp             TTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCE
T ss_pred             ccCceeEEEecccCCEEEEEecCceEEEEeccccee
Confidence             22367888999999999999999999999998644

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=98.56  E-value=0.00016  Score=58.00  Aligned_cols=226  Identities=7%  Similarity=-0.076  Sum_probs=137.7

Q ss_pred             eEEEecCCCCeEEEEecCCce--EEEEEecCCCCcceEEEEeC-CceEEEEEcCCCeEEEEeCCCcccc-eecccCCcce
Q psy10867          6 EVAFSYDGSGAISVWEPKGGT--LLMSYKGASVLSPHSMCLLG-NDYVLGVEKGKPMIQAWPVNSQEKA-QLRLICPGRI   81 (343)
Q Consensus         6 ~~~~s~~~dg~i~iwd~~~~~--~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~i~iw~~~~~~~~-~~~~~~~~~v   81 (343)
                      .++|+.  ...|+..++....  ....+.+. . .+.+++|.+ ++.+..+-...+.|..++.++.... ..........
T Consensus         6 ~ll~~~--~~~I~~i~l~~~~~~~~~~~~~~-~-~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p   81 (318)
T 3sov_A            6 LLLYAN--RRDLRLVDATNGKENATIVVGGL-E-DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSP   81 (318)
T ss_dssp             EEEEEC--EEEEEEEETTCTTSCCEEEEEEE-E-EEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCC
T ss_pred             EEEEEc--cCeEEEEECCCCceEEEEEecCC-C-ccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCc
Confidence            455654  3578889987653  22222222 2 567899998 4677777666689999998876432 2222223456


Q ss_pred             EEEEECCCC-CEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEec--CCCeEEEeecCccceeeee
Q psy10867         82 SSMQASPDA-AYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGG--EDGTICVWQLSRLICKQTV  157 (343)
Q Consensus        82 ~~~~~s~~~-~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~--~dg~i~iwd~~~~~~~~~~  157 (343)
                      ..+++.+.+ .++.+ ...+.|.+++++.......+.........+++.|.+..|+.+.  ..+.|...++.....    
T Consensus        82 ~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~----  157 (318)
T 3sov_A           82 DGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR----  157 (318)
T ss_dssp             CEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSC----
T ss_pred             cEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCe----
Confidence            678888744 44445 4567999999875443333334445678999998655555544  357788887764311    


Q ss_pred             ecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcC
Q psy10867        158 AFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDG  236 (343)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~  236 (343)
                                        .......-...+.+++++++. .+.++-+..+.|..+|+.......... .......+++..
T Consensus       158 ------------------~~~~~~~l~~Pnglavd~~~~-~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~  218 (318)
T 3sov_A          158 ------------------FIIINSEIYWPNGLTLDYEEQ-KLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFE  218 (318)
T ss_dssp             ------------------EEEECSSCSCEEEEEEETTTT-EEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEET
T ss_pred             ------------------EEEEECCCCCccEEEEeccCC-EEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeC
Confidence                              111112234568999998663 556666678899999986433222222 234466777753


Q ss_pred             CCCEEEEEcCCCcEEEEEeeccc
Q psy10867        237 TEDNIYMGTSEGVIKSFCLRQVP  259 (343)
Q Consensus       237 ~~~~l~~~~~d~~i~i~d~~~~~  259 (343)
                       +..+.+-...+.|..++..++.
T Consensus       219 -~~lywtd~~~~~V~~~~~~~G~  240 (318)
T 3sov_A          219 -DILYWTDWSTHSILACNKYTGE  240 (318)
T ss_dssp             -TEEEEEETTTTEEEEEETTTCC
T ss_pred             -CEEEEEecCCCeEEEEECCCCC
Confidence             3444455567788888875544

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=98.55  E-value=3.3e-06  Score=75.47  Aligned_cols=219  Identities=7%  Similarity=-0.124  Sum_probs=126.5

Q ss_pred             CeEEEEecCCceEEEEEecCCCCcceEEEEeCC-ceEEEEEcCCCeEEEEeCCC----cccceecccCCcceEEEEECCC
Q psy10867         15 GAISVWEPKGGTLLMSYKGASVLSPHSMCLLGN-DYVLGVEKGKPMIQAWPVNS----QEKAQLRLICPGRISSMQASPD   89 (343)
Q Consensus        15 g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~i~iw~~~~----~~~~~~~~~~~~~v~~~~~s~~   89 (343)
                      +.|+..++.+.+....+... . .+..++|.+. +.++.+-...+.|+.+++.+    ................|++.+.
T Consensus       386 ~~I~~id~~~~~~~~~~~~~-~-~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~  463 (699)
T 1n7d_A          386 HEVRKMTLDRSEYTSLIPNL-R-NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI  463 (699)
T ss_dssp             TC-CEECTTSCCEECCSCCC-T-TCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCS
T ss_pred             cceEEEeCCCCcceeeeccC-c-ceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEee
Confidence            46777787766554444433 3 6778999985 45655555567899999875    2222222222234566888754


Q ss_pred             -CCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecC--CCeEEEeecCccceeeeeecCCCCCC
Q psy10867         90 -AAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGE--DGTICVWQLSRLICKQTVAFGIPGSS  165 (343)
Q Consensus        90 -~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~  165 (343)
                       ++++++ ...+.|.++++........+.........+++.|.+..|+.+..  .+.|..+++......           
T Consensus       464 ~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~-----------  532 (699)
T 1n7d_A          464 HSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY-----------  532 (699)
T ss_dssp             SSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCC-----------
T ss_pred             CCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCee-----------
Confidence             455555 45678999998755444444333345678899986655554442  267777776542110           


Q ss_pred             CCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeec---CCcEEEEEEcCCCCEEE
Q psy10867        166 GKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLIL---DTRLTCVAFDGTEDNIY  242 (343)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~---~~~i~~~~~~~~~~~l~  242 (343)
                                 ......-.....|+++|++. .++++-+..+.|..+++........+..   ......+++..+ .+++
T Consensus       533 -----------~l~~~~l~~PnGlavd~~~~-~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lyw  599 (699)
T 1n7d_A          533 -----------SLVTENIQWPNGITLDLLSG-RLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFW  599 (699)
T ss_dssp             -----------EESCSSCSSCCCEEECTTTC-CEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEE
T ss_pred             -----------EEEeCCCCCccEEEEeccCC-EEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEE
Confidence                       01111224467899998763 5666666778999999864333222221   122345555543 3444


Q ss_pred             EEcCCCcEEEEEeeccc
Q psy10867        243 MGTSEGVIKSFCLRQVP  259 (343)
Q Consensus       243 ~~~~d~~i~i~d~~~~~  259 (343)
                      +....+.|..++..++.
T Consensus       600 td~~~~~V~~~d~~~G~  616 (699)
T 1n7d_A          600 TDIINEAIFSANRLTGS  616 (699)
T ss_dssp             ECSTTTCEEEEETTTEE
T ss_pred             EeCCCCeEEEEEccCCC
Confidence            44557789988865443

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=98.52  E-value=8.3e-07  Score=79.29  Aligned_cols=238  Identities=10%  Similarity=-0.062  Sum_probs=135.1

Q ss_pred             CeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE--ecCCeEEEEEccC----CceEEEecccCCCeEEEEEecC-
Q psy10867         58 PMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV--SIETKLHMWQISS----GRLLATASSHYQPITIVKWSAD-  130 (343)
Q Consensus        58 ~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~--~~d~~i~v~~~~~----~~~~~~~~~~~~~v~~~~~~~~-  130 (343)
                      +.|+..++.+.+...... ....+..++|.+.+..|..  ...+.|+.+++..    ......+.........|++.+. 
T Consensus       386 ~~I~~id~~~~~~~~~~~-~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~  464 (699)
T 1n7d_A          386 HEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIH  464 (699)
T ss_dssp             TC-CEECTTSCCEECCSC-CCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSS
T ss_pred             cceEEEeCCCCcceeeec-cCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeC
Confidence            578888887765543332 2345678899987666654  3567899999875    2222222212223456788754 


Q ss_pred             CCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeC-CCeE
Q psy10867        131 SNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSH-DRTC  209 (343)
Q Consensus       131 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~-d~~i  209 (343)
                      ++++++-...+.|.+.++.......                      ...........+++.|.+. .++++-.. .+.|
T Consensus       465 g~LY~tD~~~~~I~v~d~dg~~~~~----------------------l~~~~~~~P~giavDp~~g-~ly~td~~~~~~I  521 (699)
T 1n7d_A          465 SNIYWTDSVLGTVSVADTKGVKRKT----------------------LFREQGSKPRAIVVDPVHG-FMYWTDWGTPAKI  521 (699)
T ss_dssp             SBCEECCTTTSCEEEEBSSSCCEEE----------------------ECCCSSCCCCCEECCSSSS-CCEECCCSSSCCE
T ss_pred             CcEEEEeccCCeEEEEecCCCceEE----------------------EEeCCCCCcceEEEccCCC-cEEEcccCCCCeE
Confidence            4455555567889999987542211                      1111223456788988652 34444333 3778


Q ss_pred             EEEecCCCceEEEee-cCCcEEEEEEcCCCCEEEEE-cCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEE
Q psy10867        210 KIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIYMG-TSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSC  287 (343)
Q Consensus       210 ~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  287 (343)
                      ..+++.......... .-.....|+++|++..|+.+ ...+.|..+++........         ............|++
T Consensus       522 ~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~---------~~~~~~~~~P~glav  592 (699)
T 1n7d_A          522 KKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTI---------LEDEKRLAHPFSLAV  592 (699)
T ss_dssp             EBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEE---------CCCSSSCSSCCCCEE
T ss_pred             EEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEE---------EecCCcCCCceEeEE
Confidence            888765332222221 22346789999987666555 4567899998864222111         011111123345566


Q ss_pred             ccCCCEEEEEeCCCcEEEEecccceeeeecc-cCCceEEEEEc
Q psy10867        288 SITGITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVLGAFLG  329 (343)
Q Consensus       288 s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~s  329 (343)
                      ..+ .++++....+.|..++..+|+.+..+. .......+++.
T Consensus       593 d~~-~lywtd~~~~~V~~~d~~~G~~~~~i~~~~~~P~~i~v~  634 (699)
T 1n7d_A          593 FED-KVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVLF  634 (699)
T ss_dssp             ETT-EEEEECSTTTCEEEEETTTEEEEECCCTTCSSCCCCCBC
T ss_pred             ECC-EEEEEeCCCCeEEEEEccCCCceEEeecCCCCCcEEEEe
Confidence            544 455566677899999988888887775 33334455443

>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*

Probab=98.52  E-value=0.00015  Score=58.76  Aligned_cols=198  Identities=8%  Similarity=-0.001  Sum_probs=115.4

Q ss_pred             ceEEEEECCCCCEEEEe-------------cCCeEEEEEccC--CceEE-Eecc-----cCCCeEEEEEec--CCC-EEE
Q psy10867         80 RISSMQASPDAAYIAVS-------------IETKLHMWQISS--GRLLA-TASS-----HYQPITIVKWSA--DSN-FIV  135 (343)
Q Consensus        80 ~v~~~~~s~~~~~l~~~-------------~d~~i~v~~~~~--~~~~~-~~~~-----~~~~v~~~~~~~--~~~-~l~  135 (343)
                      ....++..|+|..++++             .+|.|.++|+++  ++... .+.+     ..-....+.+.+  ++. +|+
T Consensus        51 G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~  130 (355)
T 3sre_A           51 GSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLL  130 (355)
T ss_dssp             CCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEE
T ss_pred             CcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEE
Confidence            34566677888766665             588999999874  23211 2222     223567888766  343 344


Q ss_pred             Ee-cC--CCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecc-cccceEEEEeecCCCceEEEEee-------
Q psy10867        136 TG-GE--DGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQ-HSLPVTHVTLSKLGAKSRVASVS-------  204 (343)
Q Consensus       136 s~-~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~l~~~~-------  204 (343)
                      .+ ..  +.+|.+|++........                  .+....+ .-...+.+.+.++|  .+.++..       
T Consensus       131 Vvnh~~~~s~ielf~~d~~~~~~~------------------~~~~~~g~~~~~pND~~v~~~G--~fyvt~~~~ftd~~  190 (355)
T 3sre_A          131 VVNHPGSSSTVEVFKFQEEEKSLL------------------HLKTIRHKLLPSVNDIVAVGPE--HFYATNDHYFIDPY  190 (355)
T ss_dssp             EEECSTTCCEEEEEEEETTTTEEE------------------EEEEECCTTCSSEEEEEEEETT--EEEEEESCSCSSHH
T ss_pred             EEECCCCCCeEEEEEEECCCCEEE------------------EEeccccCCCCCCceEEEeCCC--CEEecCCcEeCCcc
Confidence            43 22  46788887765422111                  2222222 23457899999998  6666643       


Q ss_pred             ----------CCCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEc-CCCcEEEEEeecccccccccccCCCCCC
Q psy10867        205 ----------HDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGT-SEGVIKSFCLRQVPRTRDHHIQDSTSNP  273 (343)
Q Consensus       205 ----------~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~~~  273 (343)
                                ..|.+..+|.  ++.......-...+.++|+||++.|+++. ..+.|+.|++.........        .
T Consensus       191 ~~~~e~~~~~~~g~vyr~d~--~~~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~--------~  260 (355)
T 3sre_A          191 LKSWEMHLGLAWSFVTYYSP--NDVRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPL--------R  260 (355)
T ss_dssp             HHHHHHHTTCCCEEEEEECT--TCCEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEE--------E
T ss_pred             cccchhhccCCccEEEEEEC--CeEEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecC--------E
Confidence                      1245555554  33332223345678999999999888764 5789999998742221110        1


Q ss_pred             ccccccCcEEEEEEcc-CCCEEEEEeCC-CcEEEEec
Q psy10867        274 DFIGHEKQVTSLSCSI-TGITLLSSSAD-ETLKIWHT  308 (343)
Q Consensus       274 ~~~~~~~~v~~~~~s~-~~~~l~s~~~d-g~i~iwd~  308 (343)
                      .+ ......-.+++.+ +|++.+++..+ +.|..|+.
T Consensus       261 ~~-~~~g~PDGi~vD~e~G~lwva~~~~g~~v~~~~P  296 (355)
T 3sre_A          261 VL-SFDTLVDNISVDPVTGDLWVGCHPNGMRIFFYDA  296 (355)
T ss_dssp             EE-ECSSEEEEEEECTTTCCEEEEEESCHHHHHSCCT
T ss_pred             EE-eCCCCCceEEEeCCCCcEEEEecCCceEEEEECC
Confidence            11 1235677899999 59887766544 23433443

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*

Probab=98.48  E-value=0.00057  Score=60.28  Aligned_cols=226  Identities=5%  Similarity=-0.139  Sum_probs=139.7

Q ss_pred             ceEEEecCCCCeEEEEecCCceEEEEEecC-CCCcceEEEEeCC-ceEEEEEcCCCeEEEEeCCCcccceecccCCcceE
Q psy10867          5 NEVAFSYDGSGAISVWEPKGGTLLMSYKGA-SVLSPHSMCLLGN-DYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRIS   82 (343)
Q Consensus         5 ~~~~~s~~~dg~i~iwd~~~~~~~~~~~~~-~~~~v~~~~~~~~-~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~   82 (343)
                      .-++|+  ....|+..++.+.+....+... -. .+..++|++. +.++.+...++.|..++++................
T Consensus         7 ~~Ll~s--~~~~I~~i~l~~~~~~~~~~~~~~~-~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~   83 (628)
T 4a0p_A            7 AFLLFS--RRADIRRISLETNNNNVAIPLTGVK-EASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPE   83 (628)
T ss_dssp             CEEEEE--ETTEEEEEESSCTTCEEECCCCSCS-CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCC
T ss_pred             cEEEEE--eCCcEEEEECCCCCcceEEEcCCCC-ceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcc
Confidence            346666  3457899998765544333322 23 6789999985 56666766678999999876544333332234567


Q ss_pred             EEEECCCCCEE-EE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEec--CCCeEEEeecCccceeeeee
Q psy10867         83 SMQASPDAAYI-AV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGG--EDGTICVWQLSRLICKQTVA  158 (343)
Q Consensus        83 ~~~~s~~~~~l-~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~--~dg~i~iwd~~~~~~~~~~~  158 (343)
                      .+++.+.+..| .+ ...+.|.+.+++.......+...-.....|++.|....|+...  ..+.|...++.....     
T Consensus        84 GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~-----  158 (628)
T 4a0p_A           84 GMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSER-----  158 (628)
T ss_dssp             EEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC-----
T ss_pred             eEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCce-----
Confidence            88887655544 45 4567999999875543333333445678999998555555444  246777777765321     


Q ss_pred             cCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCCcEEEEEEcCCC
Q psy10867        159 FGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTE  238 (343)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~  238 (343)
                                        ..+...-.....+++++++. .+.++-...+.|..+|+.................+++.. +
T Consensus       159 ------------------~~l~~~~~~P~GlalD~~~~-~LY~aD~~~~~I~~~d~dG~~~~v~~~~l~~P~glav~~-~  218 (628)
T 4a0p_A          159 ------------------TTLVPNVGRANGLTIDYAKR-RLYWTDLDTNLIESSNMLGLNREVIADDLPHPFGLTQYQ-D  218 (628)
T ss_dssp             ------------------EEEECSCSSEEEEEEETTTT-EEEEEETTTTEEEEEETTSCSCEEEEECCSCEEEEEEET-T
T ss_pred             ------------------EEEECCCCCcceEEEccccC-EEEEEECCCCEEEEEcCCCCceEEeeccCCCceEEEEEC-C
Confidence                              11112345678999999763 555565667899999986544422222333456777764 3


Q ss_pred             CEEEEEcCCCcEEEEEeecc
Q psy10867        239 DNIYMGTSEGVIKSFCLRQV  258 (343)
Q Consensus       239 ~~l~~~~~d~~i~i~d~~~~  258 (343)
                      ..+++-...+.|...|..+.
T Consensus       219 ~ly~tD~~~~~I~~~dk~tg  238 (628)
T 4a0p_A          219 YIYWTDWSRRSIERANKTSG  238 (628)
T ss_dssp             EEEEEETTTTEEEEEETTTC
T ss_pred             EEEEecCCCCEEEEEECCCC
Confidence            33344445778888886544

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=98.46  E-value=0.00078  Score=60.90  Aligned_cols=217  Identities=9%  Similarity=-0.095  Sum_probs=131.0

Q ss_pred             CeEEEEecCCceEEEEEecCCCCcceEEEEeC-CceEEEEEcCCCeEEEEeCCCc----ccceecccCCcceEEEEECCC
Q psy10867         15 GAISVWEPKGGTLLMSYKGASVLSPHSMCLLG-NDYVLGVEKGKPMIQAWPVNSQ----EKAQLRLICPGRISSMQASPD   89 (343)
Q Consensus        15 g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~i~iw~~~~~----~~~~~~~~~~~~v~~~~~s~~   89 (343)
                      ..|+..++...+....+.. .. .+..++|.+ ++.++.+-...+.|+.+++...    ...............|++.+.
T Consensus       404 ~~Ir~i~l~~~~~~~l~~~-~~-~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~  481 (791)
T 3m0c_C          404 HEVRKMTLDRSEYTSLIPN-LR-NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI  481 (791)
T ss_dssp             SSEEEECTTSCCCEEEECS-CS-SEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETT
T ss_pred             cceeEeeccCCcceeeecC-CC-ceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeec
Confidence            3567777765554444443 33 678999998 5677777766688999988753    222223223455678888877


Q ss_pred             CCEEE-E-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecC--CCeEEEeecCccceeeeeecCCCCCC
Q psy10867         90 AAYIA-V-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGE--DGTICVWQLSRLICKQTVAFGIPGSS  165 (343)
Q Consensus        90 ~~~l~-~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~  165 (343)
                      +..|. + ...+.|.+.++........+.........|++.|....|+....  .+.|...++.....            
T Consensus       482 ~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~------------  549 (791)
T 3m0c_C          482 HSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI------------  549 (791)
T ss_dssp             TTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCE------------
T ss_pred             CCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCce------------
Confidence            65444 4 45679999998755544444444456889999997555555442  36788888765321            


Q ss_pred             CCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeec---CCcEEEEEEcCCCCEEE
Q psy10867        166 GKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLIL---DTRLTCVAFDGTEDNIY  242 (343)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~---~~~i~~~~~~~~~~~l~  242 (343)
                                .......-.....|++++.+. .++++-...+.|...++...........   -.....|++.  +..|+
T Consensus       550 ----------~~lv~~~l~~P~GLavD~~~~-~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~--~~~lY  616 (791)
T 3m0c_C          550 ----------YSLVTENIQWPNGITLDLLSG-RLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVF  616 (791)
T ss_dssp             ----------EEEECSSCSCEEEEEEETTTT-EEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE--TTEEE
T ss_pred             ----------EEEEeCCCCCceEEEEecCCC-eEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEe--CCEEE
Confidence                      111122335688999997663 4555555678899999864443333322   1234566664  34555


Q ss_pred             EE-cCCCcEEEEEeecc
Q psy10867        243 MG-TSEGVIKSFCLRQV  258 (343)
Q Consensus       243 ~~-~~d~~i~i~d~~~~  258 (343)
                      .. ...+.|...|..++
T Consensus       617 wtD~~~~~I~~~dk~tG  633 (791)
T 3m0c_C          617 WTDIINEAIFSANRLTG  633 (791)
T ss_dssp             EEETTTTEEEEEETTTC
T ss_pred             EEECCCCEEEEEeCCCC
Confidence            54 45677777775443

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*

Probab=98.45  E-value=0.00067  Score=59.74  Aligned_cols=181  Identities=10%  Similarity=-0.064  Sum_probs=102.2

Q ss_pred             CCeEEEEecCCceE-EEEEecCCCCcceEEEEeC-CceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCC
Q psy10867         14 SGAISVWEPKGGTL-LMSYKGASVLSPHSMCLLG-NDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAA   91 (343)
Q Consensus        14 dg~i~iwd~~~~~~-~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~   91 (343)
                      .+.|..+++..... ...+...-. .+..+++.+ ++.+..+-...+.|.+.+++.................+++.|.+.
T Consensus        61 ~~~I~r~~~~g~~~~~~v~~~~~~-~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g  139 (619)
T 3s94_A           61 EEAIKRTEFNKTESVQNVVVSGLL-SPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSG  139 (619)
T ss_dssp             TTEEEEEEC-----CEEEECSSCS-CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTT
T ss_pred             CCeEEEEEccCCCceEEEEeCCCC-CcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCC
Confidence            34555555543321 222232224 778999998 567777777778999999886543333323445577899988654


Q ss_pred             -EEEEe--cCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEe-cCCCeEEEeecCccceeeeeecCCCCCCCC
Q psy10867         92 -YIAVS--IETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTG-GEDGTICVWQLSRLICKQTVAFGIPGSSGK  167 (343)
Q Consensus        92 -~l~~~--~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~  167 (343)
                       ++.+.  ..+.|...+++...........-.....|++.+++..|+.+ ...+.|...|+........           
T Consensus       140 ~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~-----------  208 (619)
T 3s94_A          140 FMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAV-----------  208 (619)
T ss_dssp             EEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC-------------
T ss_pred             eEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEE-----------
Confidence             44453  34678888876443333333334567899999866655544 4567888888865322110           


Q ss_pred             ccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceE
Q psy10867        168 GVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDL  220 (343)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~  220 (343)
                                 ..+.......+++..+   .++++-...+.|...|..+++..
T Consensus       209 -----------~~~~~~~P~gi~~~~~---~ly~td~~~~~V~~~d~~tg~~~  247 (619)
T 3s94_A          209 -----------VKGSLPHPFALTLFED---ILYWTDWSTHSILACNKYTGEGL  247 (619)
T ss_dssp             ------------------CCCEEESSS---EEEEECTTTCSEEEEESSSCCCC
T ss_pred             -----------EeCCCCCceEEEEeCC---EEEEecCCCCEEEEEECCCCccc
Confidence                       0101112234555443   35555556677777776665543

>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}

Probab=98.42  E-value=0.00059  Score=57.77  Aligned_cols=233  Identities=8%  Similarity=-0.067  Sum_probs=128.6

Q ss_pred             CCeEEEEecCCceEEEEEecCC---CCcceEEEE-------eCCce-EEEEEcCCC------eEEEEeCCC-cccc----
Q psy10867         14 SGAISVWEPKGGTLLMSYKGAS---VLSPHSMCL-------LGNDY-VLGVEKGKP------MIQAWPVNS-QEKA----   71 (343)
Q Consensus        14 dg~i~iwd~~~~~~~~~~~~~~---~~~v~~~~~-------~~~~~-~~~~~~~~~------~i~iw~~~~-~~~~----   71 (343)
                      .+.|++.|..++..........   . .+..++|       ++++. ++++...++      .+.+++... +...    
T Consensus       161 ~~~i~~ID~~~~~v~~l~~~~~~~~~-~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~  239 (496)
T 3kya_A          161 HKAIQLIDLKNRMLSSPLNINTIPTN-RIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSD  239 (496)
T ss_dssp             EEEEEEEETTTTEEEEEECCTTSSCS-BEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSC
T ss_pred             CCeEEEEECCCCEEEEEEccCccccC-CCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeeccc
Confidence            3567777877666554443322   2 5889999       99987 555544431      255565333 2221    


Q ss_pred             -eecccCCcceEEEEECCC-CCEEEE-ecCCeEEEEEcc-------CCce-----------EEE-ec-ccCCCeEEEEEe
Q psy10867         72 -QLRLICPGRISSMQASPD-AAYIAV-SIETKLHMWQIS-------SGRL-----------LAT-AS-SHYQPITIVKWS  128 (343)
Q Consensus        72 -~~~~~~~~~v~~~~~s~~-~~~l~~-~~d~~i~v~~~~-------~~~~-----------~~~-~~-~~~~~v~~~~~~  128 (343)
                       ..+.. -.....++++|+ +.++++ -.++.|..+|+.       ++..           ... +. +.......|+|+
T Consensus       240 ~~~v~~-~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~  318 (496)
T 3kya_A          240 IQLIAA-YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIH  318 (496)
T ss_dssp             EEEEEE-ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEEC
T ss_pred             ceeecc-CCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEc
Confidence             11211 123457788994 555555 356789999997       5543           112 21 223446799999


Q ss_pred             cCCCE-EEEecCCCeEEEeecCccc--ee--eeeecCCCCCCCCccccccceeeeecccccceE-EEEee-------cCC
Q psy10867        129 ADSNF-IVTGGEDGTICVWQLSRLI--CK--QTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVT-HVTLS-------KLG  195 (343)
Q Consensus       129 ~~~~~-l~s~~~dg~i~iwd~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~-------~~~  195 (343)
                      |+++. +++-+..+.|+.++.....  ..  ..+.. ..+..+.. .+..     ....-.... .++..       +++
T Consensus       319 p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG-~~g~~G~~-DG~~-----~~a~f~~P~~gv~vd~~~~~~~~~g  391 (496)
T 3kya_A          319 PTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVG-GYKQSGYR-DDVG-----TEARMNNPCQGVFVKNPDYTGEEEY  391 (496)
T ss_dssp             TTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEE-BTTBCCCB-CCBG-----GGCBCSSEEEEEEEECTTCCSSCCE
T ss_pred             CCCCEEEEEeCCCCEEEEEecCCCcceecccEEecC-CCCCCccc-CCcc-----cccccCCCeEEEEEccccccccCCC
Confidence            99995 4444567889887654321  10  11110 00000000 0000     001112233 44444       344


Q ss_pred             CceEEEEeeCCCeEEEEecCCCceEEEee-c------------------------CCcEEEEEEcCC-CCEEEEEcCCCc
Q psy10867        196 AKSRVASVSHDRTCKIFDLCTGEDLLSLI-L------------------------DTRLTCVAFDGT-EDNIYMGTSEGV  249 (343)
Q Consensus       196 ~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~------------------------~~~i~~~~~~~~-~~~l~~~~~d~~  249 (343)
                        .++++-.....|+.++ .++. +.++. .                        -.....++++++ +.++++=..+..
T Consensus       392 --~lyVaD~~N~rIr~i~-~~G~-v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~r  467 (496)
T 3kya_A          392 --DFYFVDRLNFCVRKVT-PEGI-VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHT  467 (496)
T ss_dssp             --EEEEEEGGGTEEEEEC-TTCB-EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTTE
T ss_pred             --eEEEEECCCCEEEEEe-CCCC-EEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCE
Confidence              6777777788999998 4564 33332 1                        023678999997 655555566889


Q ss_pred             EEEEEeeccc
Q psy10867        250 IKSFCLRQVP  259 (343)
Q Consensus       250 i~i~d~~~~~  259 (343)
                      |+.+++....
T Consensus       468 Irki~~~~~~  477 (496)
T 3kya_A          468 IRTISMEQEE  477 (496)
T ss_dssp             EEEEEECCCC
T ss_pred             EEEEECCCCc
Confidence            9999887643

>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}

Probab=98.42  E-value=0.00036  Score=55.31  Aligned_cols=206  Identities=10%  Similarity=0.029  Sum_probs=126.2

Q ss_pred             EecCCCCcceEEEEeC-CceEEEEEcCCCeEEEEeCCCcccceecccC-------CcceEEEEE---CCCCCEEEEec--
Q psy10867         31 YKGASVLSPHSMCLLG-NDYVLGVEKGKPMIQAWPVNSQEKAQLRLIC-------PGRISSMQA---SPDAAYIAVSI--   97 (343)
Q Consensus        31 ~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~-------~~~v~~~~~---s~~~~~l~~~~--   97 (343)
                      ++.... -..+++|.+ ++.+.++.-..+.|..|+...+.........       ...+..+.|   .|+++++++..  
T Consensus         8 ~~~~~~-yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~   86 (334)
T 2p9w_A            8 VKVKNL-TPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNA   86 (334)
T ss_dssp             ECCTTC-CCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEET
T ss_pred             ecCccc-CCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccc
Confidence            333333 567899987 5777777767799999999865433332221       124689999   58888888533  


Q ss_pred             ------------CCeEEEEEcc---CCceEEEec--cc-----------CCCeEEEEEecCCCEEEEecCC-CeEEEeec
Q psy10867         98 ------------ETKLHMWQIS---SGRLLATAS--SH-----------YQPITIVKWSADSNFIVTGGED-GTICVWQL  148 (343)
Q Consensus        98 ------------d~~i~v~~~~---~~~~~~~~~--~~-----------~~~v~~~~~~~~~~~l~s~~~d-g~i~iwd~  148 (343)
                                  +..|..||+.   +++.+....  ..           ......++..++|+..++++.. +.|...+.
T Consensus        87 ~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~p  166 (334)
T 2p9w_A           87 KSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSA  166 (334)
T ss_dssp             TTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECT
T ss_pred             ccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeC
Confidence                        5679999998   776654432  11           1247899999999999988887 88777776


Q ss_pred             CccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCce--EEEe--e
Q psy10867        149 SRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGED--LLSL--I  224 (343)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~--~~~~--~  224 (343)
                      ..... ..+.                ............+.|++.|++  ..|+.....+.|..+|+.+...  +..-  .
T Consensus       167 dG~~~-~~~~----------------~~~~~~~~~~G~nGIv~~pdg--~~Liv~~~~g~L~~fD~~~pv~~~v~~~~~G  227 (334)
T 2p9w_A          167 DGKTV-STFA----------------WESGNGGQRPGYSGITFDPHS--NKLIAFGGPRALTAFDVSKPYAWPEPVKING  227 (334)
T ss_dssp             TSCCE-EEEE----------------ECCCCSSSCCSCSEEEEETTT--TEEEEESSSSSEEEEECSSSSCCCEECEESS
T ss_pred             CCCEE-eeee----------------ecCCCcccccCcceEEEeCCC--CEEEEEcCCCeEEEEcCCCCcceeecccccC
Confidence            65321 1110                000001122346789999999  5666665599999999885433  2111  0


Q ss_pred             ---cCCcEEEE-EEcCCCCEEEEE-cCCCcEEEEEee
Q psy10867        225 ---LDTRLTCV-AFDGTEDNIYMG-TSEGVIKSFCLR  256 (343)
Q Consensus       225 ---~~~~i~~~-~~~~~~~~l~~~-~~d~~i~i~d~~  256 (343)
                         .-.....+ ..-.+|+.|+++ ...+.+.+.+..
T Consensus       228 ~~~~~~~~dgilp~~~~G~vllV~~~~~~~~~l~S~D  264 (334)
T 2p9w_A          228 DFGTLSGTEKIVTVPVGNESVLVGARAPYAISFRSWD  264 (334)
T ss_dssp             CCCCCTTEEEEEEEEETTEEEEEEEETTEEEEEECSS
T ss_pred             CcccccCcccccccccCCEEEEEEcCCCCEEEEECCC
Confidence               11123333 333467774544 445555554433

>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*

Probab=98.38  E-value=0.00057  Score=55.78  Aligned_cols=233  Identities=12%  Similarity=0.058  Sum_probs=125.4

Q ss_pred             cceEEEEeCCceEEEEEcCCCeEEEEeCCCcc-cceec---ccCCcceEEEEECCC----CCEEEEec----C----CeE
Q psy10867         38 SPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQE-KAQLR---LICPGRISSMQASPD----AAYIAVSI----E----TKL  101 (343)
Q Consensus        38 ~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~-~~~~~---~~~~~~v~~~~~s~~----~~~l~~~~----d----~~i  101 (343)
                      ....++|.|+|+++++-.. |.|.+++. +++ .+..+   .........|+++|+    +.+.++..    +    +.|
T Consensus        30 ~P~~ia~~pdG~l~V~e~~-g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v  107 (354)
T 3a9g_A           30 VPWSIAPLGGGRYLVTERP-GRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRV  107 (354)
T ss_dssp             CEEEEEEEETTEEEEEETT-TEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEE
T ss_pred             CCeEEEEcCCCeEEEEeCC-CEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEE
Confidence            7789999999998888776 99999974 343 11111   122356889999997    44444422    3    578


Q ss_pred             EEEEccCC--c---e--E-EEecc-cCCCeEEEEEecCCCEEEEecCC-------------CeEEEeecCccceeeeeec
Q psy10867        102 HMWQISSG--R---L--L-ATASS-HYQPITIVKWSADSNFIVTGGED-------------GTICVWQLSRLICKQTVAF  159 (343)
Q Consensus       102 ~v~~~~~~--~---~--~-~~~~~-~~~~v~~~~~~~~~~~l~s~~~d-------------g~i~iwd~~~~~~~~~~~~  159 (343)
                      ..|+...+  .   .  + ..+.. .......++|.|||.+.++.+..             |.|..++.....     . 
T Consensus       108 ~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~-----p-  181 (354)
T 3a9g_A          108 IRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRP-----P-  181 (354)
T ss_dssp             EEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCC-----C-
T ss_pred             EEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCC-----C-
Confidence            88887654  1   1  1 11221 11124579999999877765432             334444432210     0 


Q ss_pred             CCCCCCCCccccccceeeeecccccceEEEEeec-CCCceEEEEeeC-CC--eEEEEecCCCc-----------------
Q psy10867        160 GIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSK-LGAKSRVASVSH-DR--TCKIFDLCTGE-----------------  218 (343)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~l~~~~~-d~--~i~~wd~~~~~-----------------  218 (343)
                           ..+..   ........++. ....++|+| ++  .++++-.. ++  .|.+..  .+.                 
T Consensus       182 -----~~npf---~~~~i~a~G~r-np~Gla~d~~~g--~l~v~d~g~~~~dei~~i~--~G~nyGwp~~~g~~~~~~~~  248 (354)
T 3a9g_A          182 -----ADNPF---PNSPIWSYGHR-NPQGIDWHRASG--VMVATEHGPVGHDEVNIIL--KGGNYGWPLATGKAGRGEFV  248 (354)
T ss_dssp             -----TTSSS---TTCCEEEECCS-CCCEEEECTTTC--CEEEEECCSSSCCEEEEEC--TTCBCCTTTCCSCCCCTTSC
T ss_pred             -----CCCCC---CCCcEEEEccC-CcceEEEeCCCC--CEEEEecCCCCCcEEEEec--CCCcCCCCcccCCCCCCCCc
Confidence                 00000   00111112332 346799999 55  44443222 21  233322  111                 


Q ss_pred             -eEEEe-ecCCcEEEEEEc-------CCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEcc
Q psy10867        219 -DLLSL-ILDTRLTCVAFD-------GTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSI  289 (343)
Q Consensus       219 -~~~~~-~~~~~i~~~~~~-------~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~  289 (343)
                       .+..+ ........++|.       .++.++++....+.|...++.........       ...+.+....+..+++.|
T Consensus       249 ~p~~~~~~~~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~-------~~~~~~~~~rp~~v~~~p  321 (354)
T 3a9g_A          249 DPVIDTGSETWAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKI-------STFFKNVFGRLRDVVIDD  321 (354)
T ss_dssp             CCSEECTTCCCCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEE-------EEECTTTSCCEEEEEECT
T ss_pred             CCEeecCCCCcCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccce-------eeeccCCCCCeeEEEECC
Confidence             22333 223457788884       46767777677788888888753221100       001112245688999999


Q ss_pred             CCCEEEEEe
Q psy10867        290 TGITLLSSS  298 (343)
Q Consensus       290 ~~~~l~s~~  298 (343)
                      ||.++++..
T Consensus       322 DG~lyv~~~  330 (354)
T 3a9g_A          322 DGGILISTS  330 (354)
T ss_dssp             TSCEEEEEC
T ss_pred             CCcEEEEEe
Confidence            997666654

>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1

Probab=98.33  E-value=0.00081  Score=55.14  Aligned_cols=224  Identities=9%  Similarity=0.119  Sum_probs=145.5

Q ss_pred             CCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCc-ccceecccC----CcceEEEEECC
Q psy10867         14 SGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQ-EKAQLRLIC----PGRISSMQASP   88 (343)
Q Consensus        14 dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~-~~~~~~~~~----~~~v~~~~~s~   88 (343)
                      ..++.|+|+++.+.++.+.-.+  .|.--.|-.+..+..+..  ..|.-|++++. .+.+.+..|    ...|..-..++
T Consensus        85 g~~lQiFnle~K~klks~~~~e--~VvfWkWis~~~l~lVT~--taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~  160 (494)
T 1bpo_A           85 GKTLQIFNIEMKSKMKAHTMTD--DVTFWKWISLNTVALVTD--NAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDA  160 (494)
T ss_dssp             TTEEEEEETTTTEEEEEEECSS--CCCEEEEEETTEEEEECS--SEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECT
T ss_pred             CCeEEEEchHHhhhhcceecCC--CceEEEecCCCeEEEEcC--CeeEEecccCCCCchhheecchhcccceEEEEEECC
Confidence            4789999999999999988877  566666765555554443  47999999753 333444332    35688888899


Q ss_pred             CCCEEEE-e---c----CCeEEEEEccCCceEEEecccCCCeEEEEEecC---CCEEEEecC---CCeEEEeecCccc-e
Q psy10867         89 DAAYIAV-S---I----ETKLHMWQISSGRLLATASSHYQPITIVKWSAD---SNFIVTGGE---DGTICVWQLSRLI-C  153 (343)
Q Consensus        89 ~~~~l~~-~---~----d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~s~~~---dg~i~iwd~~~~~-~  153 (343)
                      +.++++. |   .    .|.+.+|..+.+ ..+.+++|......+....+   ...++.+..   .+.+.+-++.... .
T Consensus       161 ~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~  239 (494)
T 1bpo_A          161 KQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTG  239 (494)
T ss_dssp             TSSEEEEEEEEEETTEEEEEEEEEESTTC-CEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTT
T ss_pred             CCCeEEEEeecccCCcccceEEEeecccc-ccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccC
Confidence            9998884 2   2    367999998644 45677888665444443211   123333333   2678888885430 0


Q ss_pred             eeeeecCCCCCCCCccccccceeee---ecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcE
Q psy10867        154 KQTVAFGIPGSSGKGVTGLTEPLHV---KSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRL  229 (343)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i  229 (343)
                      ...+.              .+....   .....+..-++.+++..  ..+..-+.-|.+.+||++++.++..-+ ....|
T Consensus       240 ~~~f~--------------kk~vdv~fppe~~~DFPvamqvs~ky--gviyviTK~G~i~lyDleTgt~i~~nrIs~~~i  303 (494)
T 1bpo_A          240 NQPFP--------------KKAVDVFFPPEAQNDFPVAMQISEKH--DVVFLITKYGYIHLYDLETGTCIYMNRISGETI  303 (494)
T ss_dssp             CCCCC--------------CEEEECCCCTTSTTCCEEEEEEETTT--TEEEEEETTSEEEEEETTTCCEEEEEECCSSCE
T ss_pred             CCCcc--------------ceeeeeeCCcccccCceeEEEecccC--CEEEEEecCceEEEEecccceeeeeecccCCce
Confidence            00000              001111   11234556688888877  688889999999999999999988777 45566


Q ss_pred             EEEEEcCCCCEEEEEcCCCcEEEEEeecc
Q psy10867        230 TCVAFDGTEDNIYMGTSEGVIKSFCLRQV  258 (343)
Q Consensus       230 ~~~~~~~~~~~l~~~~~d~~i~i~d~~~~  258 (343)
                      -..+.+....-++.....|.|.-..+...
T Consensus       304 F~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~  332 (494)
T 1bpo_A          304 FVTAPHEATAGIIGVNRKGQVLSVCVEEE  332 (494)
T ss_dssp             EEEEEETTTTEEEEEETTCEEEEEEECTT
T ss_pred             EEecccCCCCcEEEEccCceEEEEEEccc
Confidence            66666666666666668888877766653

>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*

Probab=98.28  E-value=0.001  Score=54.28  Aligned_cols=239  Identities=8%  Similarity=-0.036  Sum_probs=128.3

Q ss_pred             CcceEEEEECCCCCEEEEecCCeEEEEEccCCc-eEEEec---ccCCCeEEEEEecC---CCEEEEecC----C----Ce
Q psy10867         78 PGRISSMQASPDAAYIAVSIETKLHMWQISSGR-LLATAS---SHYQPITIVKWSAD---SNFIVTGGE----D----GT  142 (343)
Q Consensus        78 ~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~-~~~~~~---~~~~~v~~~~~~~~---~~~l~s~~~----d----g~  142 (343)
                      -.....++|.|+|+++++..++.|++++ .+++ .+..+.   ........|+++|+   +..|+.+..    +    ..
T Consensus        28 l~~P~~ia~~pdG~l~V~e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~  106 (354)
T 3a9g_A           28 LEVPWSIAPLGGGRYLVTERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNR  106 (354)
T ss_dssp             CSCEEEEEEEETTEEEEEETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEE
T ss_pred             CCCCeEEEEcCCCeEEEEeCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceE
Confidence            3456899999999988887789999997 4554 222221   12346889999997   444444332    2    56


Q ss_pred             EEEeecCccc-eeeeeecCCCCCCCCccccccceeeeec-ccccceEEEEeecCCCceEEEEeeC-------------CC
Q psy10867        143 ICVWQLSRLI-CKQTVAFGIPGSSGKGVTGLTEPLHVKS-QHSLPVTHVTLSKLGAKSRVASVSH-------------DR  207 (343)
Q Consensus       143 i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~l~~~~~-------------d~  207 (343)
                      |..|+..... ......               ..+..+. ........++|.|++  .++++.+.             .|
T Consensus       107 v~r~~~~~~~~~~~~~~---------------~l~~~~~~~~~h~~~~l~~~pDG--~Lyvt~G~~~~~~~~~d~~~~~G  169 (354)
T 3a9g_A          107 VIRGRLDGSTFKLKEVK---------------TLIDGIPGAYIHNGGRIRFGPDG--MLYITTGDAADPRLAQDLSSLAG  169 (354)
T ss_dssp             EEEEEECSSSCCEEEEE---------------EEEEEEECCSSCCCCCEEECTTS--CEEEECCCTTCGGGGTCTTCCSS
T ss_pred             EEEEEECCCCcCcCccE---------------EEEEcCCCCCCcCCceEEECCCC--cEEEEECCCCCCccccCCCCCCe
Confidence            7777765431 000000               0111111 111234679999999  56665432             24


Q ss_pred             eEEEEecCCC---------ceEEEeecCCcEEEEEEcC-CCCEEEEEcCCC---cEEEEEeecccccccccc--------
Q psy10867        208 TCKIFDLCTG---------EDLLSLILDTRLTCVAFDG-TEDNIYMGTSEG---VIKSFCLRQVPRTRDHHI--------  266 (343)
Q Consensus       208 ~i~~wd~~~~---------~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~---~i~i~d~~~~~~~~~~~~--------  266 (343)
                      .|.-++....         ..+... .......++|+| ++.++++-...+   .|.+.  ..... .-+..        
T Consensus       170 ~I~ri~~dG~~p~~npf~~~~i~a~-G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i--~~G~n-yGwp~~~g~~~~~  245 (354)
T 3a9g_A          170 KILRVDEEGRPPADNPFPNSPIWSY-GHRNPQGIDWHRASGVMVATEHGPVGHDEVNII--LKGGN-YGWPLATGKAGRG  245 (354)
T ss_dssp             EEEEECTTSCCCTTSSSTTCCEEEE-CCSCCCEEEECTTTCCEEEEECCSSSCCEEEEE--CTTCB-CCTTTCCSCCCCT
T ss_pred             EEEEEcCCCCCCCCCCCCCCcEEEE-ccCCcceEEEeCCCCCEEEEecCCCCCcEEEEe--cCCCc-CCCCcccCCCCCC
Confidence            5666665321         112221 223456799999 555444432222   23332  21110 00000        


Q ss_pred             cCCCCCCccccccCcEEEEEE-------ccCCCEEEEEeCCCcEEEEecccc-eee--eec-c-cCCceEEEEEccCCCe
Q psy10867        267 QDSTSNPDFIGHEKQVTSLSC-------SITGITLLSSSADETLKIWHTISR-QCL--RTI-Q-HKGPVLGAFLGLLPPA  334 (343)
Q Consensus       267 ~~~~~~~~~~~~~~~v~~~~~-------s~~~~~l~s~~~dg~i~iwd~~~~-~~~--~~~-~-~~~~v~~~~~sp~~~~  334 (343)
                      ....++..+......+..++|       ..+|+++++.-..+.|...++... +..  ..+ . ....+..+++.|||..
T Consensus       246 ~~~~p~~~~~~~~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~l  325 (354)
T 3a9g_A          246 EFVDPVIDTGSETWAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGI  325 (354)
T ss_dssp             TSCCCSEECTTCCCCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCE
T ss_pred             CCcCCEeecCCCCcCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcE
Confidence            001122222112345788888       356777777767778888888753 322  222 2 2467899999999976


Q ss_pred             eeec
Q psy10867        335 IHDY  338 (343)
Q Consensus       335 l~~~  338 (343)
                      .++.
T Consensus       326 yv~~  329 (354)
T 3a9g_A          326 LIST  329 (354)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            6554

>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}

Probab=98.25  E-value=0.00014  Score=57.70  Aligned_cols=164  Identities=6%  Similarity=0.093  Sum_probs=104.3

Q ss_pred             eEEEEECC-CCCEEEEe-cCCeEEEEEccCCceEEE-ecc----cCC--CeEEEEE---ecCCCEEEEec----------
Q psy10867         81 ISSMQASP-DAAYIAVS-IETKLHMWQISSGRLLAT-ASS----HYQ--PITIVKW---SADSNFIVTGG----------  138 (343)
Q Consensus        81 v~~~~~s~-~~~~l~~~-~d~~i~v~~~~~~~~~~~-~~~----~~~--~v~~~~~---~~~~~~l~s~~----------  138 (343)
                      -.+++|.+ ++.+++++ ..++|..|+...+..... +.+    ...  .+..+.|   .|+++++++..          
T Consensus        15 PE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~   94 (334)
T 2p9w_A           15 PEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQ   94 (334)
T ss_dssp             CSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSC
T ss_pred             CcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccccc
Confidence            45678876 45555665 689999999876644333 222    111  3578999   58877776533          


Q ss_pred             ---CCCeEEEeecC---ccceeeeeecCCCCCCCCccccccceeeeecc-cccceEEEEeecCCCceEEEEeeCC-CeEE
Q psy10867        139 ---EDGTICVWQLS---RLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQ-HSLPVTHVTLSKLGAKSRVASVSHD-RTCK  210 (343)
Q Consensus       139 ---~dg~i~iwd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~l~~~~~d-~~i~  210 (343)
                         .+..|..+|+.   +++......+..          ..+..+.+.+ .......+++.++|  +..++++.. +.|.
T Consensus        95 ~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~----------~~~~~~~~~g~~~~~~nDvavD~~G--naYVt~s~~~~~I~  162 (334)
T 2p9w_A           95 SSHGASSFHSFNLPLSENSKPVWSVNFEK----------VQDEFEKKAGKRPFGVVQSAQDRDG--NSYVAFALGMPAIA  162 (334)
T ss_dssp             CSSSCCEEEEEESSCCTTCCCSEEEESHH----------HHHHHHHHHSSCCEEEEEEEECTTS--CEEEEEEESSCEEE
T ss_pred             ccCCCCEEEEEcCCcCCCCCEEEEecCcc----------ccccccccccccccCCceeEECCCC--CEEEeCCCCCCeEE
Confidence               25779999998   654443321000          0000000000 11347899999999  788888888 8888


Q ss_pred             EEecCCCceEEEee--c-----CCcEEEEEEcCCCCEEEEEcCCCcEEEEEeec
Q psy10867        211 IFDLCTGEDLLSLI--L-----DTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQ  257 (343)
Q Consensus       211 ~wd~~~~~~~~~~~--~-----~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~  257 (343)
                      ..+.. ++.+..+.  .     ....+.|+++|+++.|++....|.+..+|+..
T Consensus       163 rV~pd-G~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~  215 (334)
T 2p9w_A          163 RVSAD-GKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK  215 (334)
T ss_dssp             EECTT-SCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred             EEeCC-CCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence            88854 33333322  1     11367899999999999987799999999884

>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A

Probab=98.15  E-value=0.0016  Score=55.11  Aligned_cols=131  Identities=4%  Similarity=-0.103  Sum_probs=82.2

Q ss_pred             eEEEEecCC----C-ceEEEeecCCcEEEEEEcCCCCEEEEEcC-CCcEEEEEeecccccccccc-cCCCC-CCcccccc
Q psy10867        208 TCKIFDLCT----G-EDLLSLILDTRLTCVAFDGTEDNIYMGTS-EGVIKSFCLRQVPRTRDHHI-QDSTS-NPDFIGHE  279 (343)
Q Consensus       208 ~i~~wd~~~----~-~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d~~i~i~d~~~~~~~~~~~~-~~~~~-~~~~~~~~  279 (343)
                      .+.+.|.+.    + .....+..+.....+..+|||+++++++. +.++.++|++.......-.+ ..... ..... -.
T Consensus       299 gv~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~G  377 (638)
T 3sbq_A          299 KTPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LG  377 (638)
T ss_dssp             CCCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CC
T ss_pred             CeeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CC
Confidence            366677665    2 23444456677788999999999988665 88999999986433211000 00000 01111 23


Q ss_pred             CcEEEEEEccCCCEEEEEeCCCcEEEEecccc----------eeeeecccCCceEEEEE------ccCCCeeeecc
Q psy10867        280 KQVTSLSCSITGITLLSSSADETLKIWHTISR----------QCLRTIQHKGPVLGAFL------GLLPPAIHDYD  339 (343)
Q Consensus       280 ~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~----------~~~~~~~~~~~v~~~~~------sp~~~~l~~~~  339 (343)
                      -.....+|.++|....+.--|..|--|++...          ..+..+.....+-.+.-      .|||++|++.+
T Consensus       378 lGPlHt~Fd~~G~aYTtlfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~ln  453 (638)
T 3sbq_A          378 LGPLHTTFDGRGNAYTTLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALS  453 (638)
T ss_dssp             SCEEEEEECSSSEEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEE
T ss_pred             CcccEEEECCCCceEeeeeecceEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEec
Confidence            45678899999966667778999999999764          45555652233344433      68888888753

>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}

Probab=98.07  E-value=0.003  Score=51.53  Aligned_cols=239  Identities=10%  Similarity=0.071  Sum_probs=122.4

Q ss_pred             cceEEEEeCCce-EEEEEcCCCeEEEEeCCCccc--ce----ecccCCcceEEEEECCC----CCEEEE-ec-------C
Q psy10867         38 SPHSMCLLGNDY-VLGVEKGKPMIQAWPVNSQEK--AQ----LRLICPGRISSMQASPD----AAYIAV-SI-------E   98 (343)
Q Consensus        38 ~v~~~~~~~~~~-~~~~~~~~~~i~iw~~~~~~~--~~----~~~~~~~~v~~~~~s~~----~~~l~~-~~-------d   98 (343)
                      ....|+|.|+|+ ++++... |.|++++......  +.    ...........++|+|+    +.+.++ ..       .
T Consensus        19 ~P~~i~~~pdG~~l~V~e~~-G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~   97 (353)
T 2g8s_A           19 HPWALAFLPDNHGMLITLRG-GELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAG   97 (353)
T ss_dssp             SEEEEEECSTTCCEEEEETT-TEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEE
T ss_pred             CcEEEEEcCCCCEEEEEeCC-ceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCce
Confidence            678999999999 8877765 8999998543321  11    11122346789999995    444444 22       2


Q ss_pred             CeEEEEEccCC--c--eEE----Eecc---cCCCeEEEEEecCCCEEEEecCC-------------CeEEEeecCcccee
Q psy10867         99 TKLHMWQISSG--R--LLA----TASS---HYQPITIVKWSADSNFIVTGGED-------------GTICVWQLSRLICK  154 (343)
Q Consensus        99 ~~i~v~~~~~~--~--~~~----~~~~---~~~~v~~~~~~~~~~~l~s~~~d-------------g~i~iwd~~~~~~~  154 (343)
                      ..|..+++..+  .  ...    .+..   ....-..|+|.|||.+.++.+..             |.|.-++.....  
T Consensus        98 ~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~--  175 (353)
T 2g8s_A           98 TAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEI--  175 (353)
T ss_dssp             EEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCC--
T ss_pred             eEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCC--
Confidence            35767776533  1  111    1111   11123579999999766665432             345555543210  


Q ss_pred             eeeecCCCCCCCCccccccceeeeecccccceEEEEeec-CCCceEEEEee-CCCeEEEEecCCC---------------
Q psy10867        155 QTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSK-LGAKSRVASVS-HDRTCKIFDLCTG---------------  217 (343)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~l~~~~-~d~~i~~wd~~~~---------------  217 (343)
                         ....+....   ......+ .-.++ .....++|.| .+  .++++-. .++.=.|.-+..+               
T Consensus       176 ---p~~npf~~~---~~~~~~i-~a~G~-rnp~gl~~d~~~g--~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~  245 (353)
T 2g8s_A          176 ---PDDNPFIKE---SGVRAEI-WSYGI-RNPQGMAMNPWSN--ALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYS  245 (353)
T ss_dssp             ---CTTCTTTTS---TTSCTTE-EEECC-SEEEEEEEETTTT--EEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTT
T ss_pred             ---CCCCCCcCC---CCCCccE-EEEcC-cCccceEEECCCC--CEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCC
Confidence               000000000   0000011 11223 3467899999 55  4444321 1111122111111               


Q ss_pred             ----------------ceEEEeecCCcEEEEEEcC-------CCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCc
Q psy10867        218 ----------------EDLLSLILDTRLTCVAFDG-------TEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPD  274 (343)
Q Consensus       218 ----------------~~~~~~~~~~~i~~~~~~~-------~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~  274 (343)
                                      ..+..+.+......+.|..       +++++++....+.|...++.........        ..
T Consensus       246 ~~~~~~~~~~~~~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~--------~~  317 (353)
T 2g8s_A          246 GFKIPEAKGEIVAGTEQPVFYWKDSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDG--------RI  317 (353)
T ss_dssp             SSCCTTCCBSSCTTSCCCSEEESSCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEE--------EE
T ss_pred             CCccCcccCCCCCCccCCeEEeCCCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeE--------Ec
Confidence                            1122233344577788864       4667777777888888888743211110        01


Q ss_pred             cccccCcEEEEEEccCCCEEEEE
Q psy10867        275 FIGHEKQVTSLSCSITGITLLSS  297 (343)
Q Consensus       275 ~~~~~~~v~~~~~s~~~~~l~s~  297 (343)
                      +......+..+++.|||.++++.
T Consensus       318 ~~~~~~rp~~v~~~pdG~lyv~t  340 (353)
T 2g8s_A          318 LTDRGQRIRDVRTGPDGYLYVLT  340 (353)
T ss_dssp             SGGGCCCEEEEEECTTSCEEEEE
T ss_pred             ccCCCCceeEEEECCCCcEEEEE
Confidence            12223578999999999866643

>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A

Probab=98.03  E-value=0.0017  Score=61.27  Aligned_cols=219  Identities=10%  Similarity=0.149  Sum_probs=134.2

Q ss_pred             CCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEE
Q psy10867         14 SGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYI   93 (343)
Q Consensus        14 dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l   93 (343)
                      ...|.|-|+..+..+.+-.-    .--+.-.+|..+++|.-.. .++.|+|+++.+.++...- ...|.-=.|- +.+.|
T Consensus        47 ~~~vvIidl~~~~~~~rrpi----~AdsAIMnP~~~iiALrag-~~lQiFnl~~k~klks~~~-~e~VvfWkWi-s~~~l  119 (1630)
T 1xi4_A           47 QAQVVIIDMNDPSNPIRRPI----SADSAIMNPASKVIALKAG-KTLQIFNIEMKSKMKAHTM-TDDVTFWKWI-SLNTV  119 (1630)
T ss_pred             CceEEEEECCCCCCcccccc----cchhhccCCCcceEEEecC-CeEEEeehHHhhhhccccc-CCCceEEEec-CCCee
Confidence            34677777766543322111    1123456788888888776 8999999999887765533 3456666776 34456


Q ss_pred             EEecCCeEEEEEccCC-ceEEEeccc----CCCeEEEEEecCCCEEEEec-------CCCeEEEeecCccceeeeeecCC
Q psy10867         94 AVSIETKLHMWQISSG-RLLATASSH----YQPITIVKWSADSNFIVTGG-------EDGTICVWQLSRLICKQTVAFGI  161 (343)
Q Consensus        94 ~~~~d~~i~v~~~~~~-~~~~~~~~~----~~~v~~~~~~~~~~~l~s~~-------~dg~i~iwd~~~~~~~~~~~~~~  161 (343)
                      +--.+..|+.|++... .+.+.+..|    ...|..-..+++.++++..|       -.|.+.+|..+..          
T Consensus       120 ~lVT~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~----------  189 (1630)
T 1xi4_A          120 ALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK----------  189 (1630)
T ss_pred             EEEcCCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccc----------
Confidence            6556788999999643 444445444    34566666778888776433       3577888888764          


Q ss_pred             CCCCCCccccccceeeeecccccceEEEEeecCCCc-eEEEEeeC---CCeEEEEecCCC---ceEE-----Eeec----
Q psy10867        162 PGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAK-SRVASVSH---DRTCKIFDLCTG---EDLL-----SLIL----  225 (343)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~l~~~~~---d~~i~~wd~~~~---~~~~-----~~~~----  225 (343)
                                   ..+.+.+|......+....+... .+++.+..   .+.+++-++...   ....     .+..    
T Consensus       190 -------------~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~  256 (1630)
T 1xi4_A          190 -------------VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEA  256 (1630)
T ss_pred             -------------cchhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCccc
Confidence                         34455566555544444322111 23332222   268888887543   1110     0111    


Q ss_pred             -CCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccc
Q psy10867        226 -DTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTR  262 (343)
Q Consensus       226 -~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~  262 (343)
                       ..-..++..++....++.-+.-|.|+++|+.++....
T Consensus       257 ~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~  294 (1630)
T 1xi4_A          257 QNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIY  294 (1630)
T ss_pred             ccCcceEEEeccccCEEEEEecCceEEEEecccchhhh
Confidence             1225567888888889999999999999999865543

>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A

Probab=98.03  E-value=0.002  Score=52.83  Aligned_cols=154  Identities=13%  Similarity=0.068  Sum_probs=98.5

Q ss_pred             EeCCceEEEEEcCCCeEEEEeCCCcccceecccC----CcceEEEEECCCCCEEEEecCCeEEEEEccCCc---------
Q psy10867         44 LLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLIC----PGRISSMQASPDAAYIAVSIETKLHMWQISSGR---------  110 (343)
Q Consensus        44 ~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~----~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~---------  110 (343)
                      ...+|.-++.+.+ +.||.-++.....-+.+...    -+.|..+..+|+|.+||...+..|.|..+..+.         
T Consensus        28 ~~~n~t~i~~a~~-n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~~V~Vv~LP~~~~~~~~~~~~  106 (452)
T 3pbp_A           28 SSQNGTRIVFIQD-NIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDNEIFVMEVPWGYSNVEDVSIQ  106 (452)
T ss_dssp             EETTTTEEEEEET-TEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECSSEEEEEECCTTCSCCCCHHHH
T ss_pred             EEcCCCEEEEEEC-CEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecCCeEEEEEecCccccCcccccc
Confidence            3445555555555 68888787744333333322    236788999999999999888899999987331         


Q ss_pred             ---eEEEecc------cCCCeEEEEEec---CCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeee
Q psy10867        111 ---LLATASS------HYQPITIVKWSA---DSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHV  178 (343)
Q Consensus       111 ---~~~~~~~------~~~~v~~~~~~~---~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (343)
                         ..+.+.-      ...+|..+.|+|   .+..|++-..|+.|++||+........ .+..          . .....
T Consensus       107 ~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k----------~-~~~fg  174 (452)
T 3pbp_A          107 DAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNK----------P-NNSFG  174 (452)
T ss_dssp             HTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESC----------C-CSEEE
T ss_pred             cccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhc----------c-ccccC
Confidence               1122221      246799999999   456899999999999999987321111 1100          0 01112


Q ss_pred             ecccccceEEEEeecCCCceEEEE--eeCCCeEEEE
Q psy10867        179 KSQHSLPVTHVTLSKLGAKSRVAS--VSHDRTCKIF  212 (343)
Q Consensus       179 ~~~~~~~v~~~~~~~~~~~~~l~~--~~~d~~i~~w  212 (343)
                      .......|.+++|.+++  -.|..  .+..|.|+-.
T Consensus       175 ~d~~~~ev~S~~Fg~~~--lTLYvl~~t~~GDIYAl  208 (452)
T 3pbp_A          175 LDARVNDITDLEFSKDG--LTLYCLNTTEGGDIFAF  208 (452)
T ss_dssp             SCSSCCCEEEEEECTTS--SCEEEEECTTSCEEEEE
T ss_pred             CCcccceEEEEEEcCCC--cEEEEEecCCCCCEEEE
Confidence            22344678899999976  55555  4577887653

>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}

Probab=98.00  E-value=0.0029  Score=50.23  Aligned_cols=215  Identities=11%  Similarity=0.083  Sum_probs=105.5

Q ss_pred             CeEEEEeCCCcccceecc--cCCcceEEEEECCCCCEEEE-ecC-----CeEEEEEccCCc---eEEE--ecccCCCeEE
Q psy10867         58 PMIQAWPVNSQEKAQLRL--ICPGRISSMQASPDAAYIAV-SIE-----TKLHMWQISSGR---LLAT--ASSHYQPITI  124 (343)
Q Consensus        58 ~~i~iw~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~-~~d-----~~i~v~~~~~~~---~~~~--~~~~~~~v~~  124 (343)
                      ..+.+||..+.+......  ........+.  .++.+++. |.+     ..+.+||+.+.+   -...  +.........
T Consensus        31 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~  108 (301)
T 2vpj_A           31 DVVEKYDPKTQEWSFLPSITRKRRYVASVS--LHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGA  108 (301)
T ss_dssp             CCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEE
T ss_pred             eEEEEEcCCCCeEEeCCCCChhhccccEEE--ECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeE
Confidence            368889988766443221  1111122222  25555554 433     469999998876   3332  2211112222


Q ss_pred             EEEecCCCEEEEecCC-----CeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceE
Q psy10867        125 VKWSADSNFIVTGGED-----GTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSR  199 (343)
Q Consensus       125 ~~~~~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~  199 (343)
                      +.+  +++.++.|+.+     ..+.+||+.+.+-..                    +..+......- +++.. ++  .+
T Consensus       109 ~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~--------------------~~~~p~~r~~~-~~~~~-~~--~i  162 (301)
T 2vpj_A          109 TTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQWSM--------------------LGDMQTAREGA-GLVVA-SG--VI  162 (301)
T ss_dssp             EEE--TTEEEEECCBCSSCBCCEEEEEETTTTEEEE--------------------EEECSSCCBSC-EEEEE-TT--EE
T ss_pred             EEE--CCEEEEEcccCCCcccceEEEEcCCCCeEEE--------------------CCCCCCCcccc-eEEEE-CC--EE
Confidence            222  67777777653     357888887653221                    11111111111 12222 44  67


Q ss_pred             EEEeeCC-----CeEEEEecCCCceEEEeecCCc--EEEEEEcCCCCEEEEEcCC-----CcEEEEEeeccccccccccc
Q psy10867        200 VASVSHD-----RTCKIFDLCTGEDLLSLILDTR--LTCVAFDGTEDNIYMGTSE-----GVIKSFCLRQVPRTRDHHIQ  267 (343)
Q Consensus       200 l~~~~~d-----~~i~~wd~~~~~~~~~~~~~~~--i~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~~~  267 (343)
                      ++.|+.+     ..+.+||+.+.+-...-..+.+  -.+++. -+++.++.|+.+     ..+.+||+.+..=..     
T Consensus       163 yv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~-----  236 (301)
T 2vpj_A          163 YCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVAL-LNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTT-----  236 (301)
T ss_dssp             EEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCBCSSSBCCCEEEEETTTTEEEE-----
T ss_pred             EEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEE-ECCEEEEEeCCCCCcccceEEEEeCCCCcEEE-----
Confidence            7777654     4588899877654332221111  112222 246666777654     468888876532111     


Q ss_pred             CCCCCCccccccCcEEEEEEccCCCEEEEEeCC-----CcEEEEecccce
Q psy10867        268 DSTSNPDFIGHEKQVTSLSCSITGITLLSSSAD-----ETLKIWHTISRQ  312 (343)
Q Consensus       268 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d-----g~i~iwd~~~~~  312 (343)
                          +..+.........+.  -++++++.|+.+     ..+.+||+++.+
T Consensus       237 ----~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~  280 (301)
T 2vpj_A          237 ----VTSMTTPRCYVGATV--LRGRLYAIAGYDGNSLLSSIECYDPIIDS  280 (301)
T ss_dssp             ----ECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBEEEEEEEETTTTE
T ss_pred             ----CCCCCCcccceeEEE--ECCEEEEEcCcCCCcccccEEEEcCCCCe
Confidence                111111111112222  267777787765     357888887654

>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}

Probab=97.98  E-value=0.0044  Score=50.53  Aligned_cols=240  Identities=9%  Similarity=-0.038  Sum_probs=126.2

Q ss_pred             cceEEEEECCCCC-EEEEecCCeEEEEEccCCceEEE---e----cccCCCeEEEEEecC---CCEEEEec-C-------
Q psy10867         79 GRISSMQASPDAA-YIAVSIETKLHMWQISSGRLLAT---A----SSHYQPITIVKWSAD---SNFIVTGG-E-------  139 (343)
Q Consensus        79 ~~v~~~~~s~~~~-~l~~~~d~~i~v~~~~~~~~~~~---~----~~~~~~v~~~~~~~~---~~~l~s~~-~-------  139 (343)
                      .....|+|.|+|+ ++++...+.|++++. ++.....   +    .........|+++|+   +..|+... .       
T Consensus        18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~-~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~   96 (353)
T 2g8s_A           18 DHPWALAFLPDNHGMLITLRGGELRHWQA-GKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKA   96 (353)
T ss_dssp             SSEEEEEECSTTCCEEEEETTTEEEEEET-TTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCE
T ss_pred             CCcEEEEEcCCCCEEEEEeCCceEEEEeC-CCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCc
Confidence            3567999999999 888878899999985 3332111   1    112345789999995   44444332 2       


Q ss_pred             CCeEEEeecCccc-eeeeeecCCCCCCCCccccccceeeeec---ccccceEEEEeecCCCceEEEEeeC----------
Q psy10867        140 DGTICVWQLSRLI-CKQTVAFGIPGSSGKGVTGLTEPLHVKS---QHSLPVTHVTLSKLGAKSRVASVSH----------  205 (343)
Q Consensus       140 dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~l~~~~~----------  205 (343)
                      ...|..+++.... ......               ..+..+.   ........++|.|++  .++++.+.          
T Consensus        97 ~~~v~r~~~~~~~~~~~~~~---------------~i~~~~p~~~~~~h~~~~l~~~pdG--~Lyv~~Gd~~~~~~~q~~  159 (353)
T 2g8s_A           97 GTAVGYGRLSDDLSKVTDFR---------------TVFRQMPKLSTGNHFGGRLVFDGKG--YLFIALGENNQRPTAQDL  159 (353)
T ss_dssp             EEEEEEEEECTTSSBEEEEE---------------EEEECSSCCBSSSCCCCCEEECSSS--EEEEEECCTTCGGGGGCT
T ss_pred             eeEEEEEEECCCCCCCCceE---------------EEEEECCCCCCCcccCccEEECCCC--cEEEEECCCCCCCccCCC
Confidence            2346656554321 000000               0111111   111123579999998  56555433          


Q ss_pred             ---CCeEEEEecCCCc------------eEEEee-cCCcEEEEEEcCCCCEEEEEcCC--CcEEEEEeecccccc----c
Q psy10867        206 ---DRTCKIFDLCTGE------------DLLSLI-LDTRLTCVAFDGTEDNIYMGTSE--GVIKSFCLRQVPRTR----D  263 (343)
Q Consensus       206 ---d~~i~~wd~~~~~------------~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d--~~i~i~d~~~~~~~~----~  263 (343)
                         .|.|.-++....-            ....+. .......++|+|....|+++...  +.=.|.-+.....-.    .
T Consensus       160 ~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~  239 (353)
T 2g8s_A          160 DKLQGKLVRLTDQGEIPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLAT  239 (353)
T ss_dssp             TSCTTEEEEEETTSCCCTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBC
T ss_pred             CCCCeEEEEECCCCCCCCCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCcc
Confidence               2467777754320            111122 23457889999954455554332  111222121111100    0


Q ss_pred             ----c---ccc---------CCCCCCccccccCcEEEEEEcc-------CCCEEEEEeCCCcEEEEecccceeeee---c
Q psy10867        264 ----H---HIQ---------DSTSNPDFIGHEKQVTSLSCSI-------TGITLLSSSADETLKIWHTISRQCLRT---I  317 (343)
Q Consensus       264 ----~---~~~---------~~~~~~~~~~~~~~v~~~~~s~-------~~~~l~s~~~dg~i~iwd~~~~~~~~~---~  317 (343)
                          +   .+.         ...++..+. +...+..++|..       +|+++++.-..+.|...++..++....   +
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~P~~~~~-~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~  318 (353)
T 2g8s_A          240 WGINYSGFKIPEAKGEIVAGTEQPVFYWK-DSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRIL  318 (353)
T ss_dssp             SSBCTTSSCCTTCCBSSCTTSCCCSEEES-SCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEES
T ss_pred             CCCCCCCCccCcccCCCCCCccCCeEEeC-CCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcc
Confidence                0   000         001112222 234577788863       467777777778888888876554332   2


Q ss_pred             c-cCCceEEEEEccCCCeeee
Q psy10867        318 Q-HKGPVLGAFLGLLPPAIHD  337 (343)
Q Consensus       318 ~-~~~~v~~~~~sp~~~~l~~  337 (343)
                      . ....+..+++.|||...++
T Consensus       319 ~~~~~rp~~v~~~pdG~lyv~  339 (353)
T 2g8s_A          319 TDRGQRIRDVRTGPDGYLYVL  339 (353)
T ss_dssp             GGGCCCEEEEEECTTSCEEEE
T ss_pred             cCCCCceeEEEECCCCcEEEE
Confidence            2 3457999999999987665

>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*

Probab=97.97  E-value=0.0045  Score=50.16  Aligned_cols=184  Identities=11%  Similarity=0.075  Sum_probs=111.2

Q ss_pred             cceEEEEeCCceEEEEE------------cCCCeEEEEeCCCc--cccee-ccc-----CCcceEEEEECC--CCC--EE
Q psy10867         38 SPHSMCLLGNDYVLGVE------------KGKPMIQAWPVNSQ--EKAQL-RLI-----CPGRISSMQASP--DAA--YI   93 (343)
Q Consensus        38 ~v~~~~~~~~~~~~~~~------------~~~~~i~iw~~~~~--~~~~~-~~~-----~~~~v~~~~~s~--~~~--~l   93 (343)
                      ..-.++..|+|.+++++            ..+|.|.++|.++.  +.... ..+     .......+.+.+  ++.  ++
T Consensus        51 G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~  130 (355)
T 3sre_A           51 GSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLL  130 (355)
T ss_dssp             CCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEE
T ss_pred             CcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEE
Confidence            55678888999887776            25699999998742  22211 111     223567777755  453  44


Q ss_pred             EEe---cCCeEEEEEccCCc-e---EEEeccc-CCCeEEEEEecCCCEEEEecC-----------------CCeEEEeec
Q psy10867         94 AVS---IETKLHMWQISSGR-L---LATASSH-YQPITIVKWSADSNFIVTGGE-----------------DGTICVWQL  148 (343)
Q Consensus        94 ~~~---~d~~i~v~~~~~~~-~---~~~~~~~-~~~v~~~~~~~~~~~l~s~~~-----------------dg~i~iwd~  148 (343)
                      ++.   .+..|.+|+++.+. .   +..+.+. -...+.+.+.++|.+.++...                 .|.|..+|.
T Consensus       131 Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~  210 (355)
T 3sre_A          131 VVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP  210 (355)
T ss_dssp             EEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT
T ss_pred             EEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC
Confidence            552   25688888876542 2   2333332 245789999999987776541                 233444443


Q ss_pred             CccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCC-Cce--EEEeec
Q psy10867        149 SRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCT-GED--LLSLIL  225 (343)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~-~~~--~~~~~~  225 (343)
                      .+                         ...+...-...+.++|+|+++ .+.++-+..+.|..|++.. ++.  ...+..
T Consensus       211 ~~-------------------------~~~~~~~l~~pNGia~spDg~-~lYvadt~~~~I~~~~~~~~g~l~~~~~~~~  264 (355)
T 3sre_A          211 ND-------------------------VRVVAEGFDFANGINISPDGK-YVYIAELLAHKIHVYEKHANWTLTPLRVLSF  264 (355)
T ss_dssp             TC-------------------------CEEEEEEESSEEEEEECTTSS-EEEEEEGGGTEEEEEEECTTSCEEEEEEEEC
T ss_pred             Ce-------------------------EEEeecCCcccCcceECCCCC-EEEEEeCCCCeEEEEEECCCCcEecCEEEeC
Confidence            21                         111222335678999999984 4445555678999999863 332  223344


Q ss_pred             CCcEEEEEEcC-CCCEEEEEcCC
Q psy10867        226 DTRLTCVAFDG-TEDNIYMGTSE  247 (343)
Q Consensus       226 ~~~i~~~~~~~-~~~~l~~~~~d  247 (343)
                      ....-.+++++ +|++.+++..+
T Consensus       265 ~g~PDGi~vD~e~G~lwva~~~~  287 (355)
T 3sre_A          265 DTLVDNISVDPVTGDLWVGCHPN  287 (355)
T ss_dssp             SSEEEEEEECTTTCCEEEEEESC
T ss_pred             CCCCceEEEeCCCCcEEEEecCC
Confidence            66678899999 58877765433

>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}

Probab=97.95  E-value=0.0019  Score=51.81  Aligned_cols=113  Identities=12%  Similarity=0.122  Sum_probs=73.0

Q ss_pred             cceEEEecCCCCeEEEEecCCceEEEEEecCC-CCcceEEEEe---CCceEEEEE-cCCCeEEEEeCCCcccceecc---
Q psy10867          4 LNEVAFSYDGSGAISVWEPKGGTLLMSYKGAS-VLSPHSMCLL---GNDYVLGVE-KGKPMIQAWPVNSQEKAQLRL---   75 (343)
Q Consensus         4 v~~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~-~~~v~~~~~~---~~~~~~~~~-~~~~~i~iw~~~~~~~~~~~~---   75 (343)
                      +..++|.++.||.|.-.|..+|+.+.+++... . ++....-.   .++..++.. ..||.|..++..++.......   
T Consensus         9 ~~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~-p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~   87 (339)
T 2be1_A            9 LSDILIAADVEGGLHAVDRRNGHIIWSIEPENFQ-PLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQ   87 (339)
T ss_dssp             EEEEEEEEETTSCEEEEETTTTEEEEEECGGGSC-CSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHH
T ss_pred             eCCEEEEEeCCCeEEEEECCCCcEEEEecCCccC-CcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccc
Confidence            56788999999999999999999999988751 1 22221100   133455443 466889888888775432111   


Q ss_pred             -cCCcceEE---EEE------CCCCCEEEEecCCeEEEEEccCCceEEEecc
Q psy10867         76 -ICPGRISS---MQA------SPDAAYIAVSIETKLHMWQISSGRLLATASS  117 (343)
Q Consensus        76 -~~~~~v~~---~~~------s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~~  117 (343)
                       ....++..   ...      +.++..++.+.++.+...|+.+|+.+..+..
T Consensus        88 lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~  139 (339)
T 2be1_A           88 LVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGP  139 (339)
T ss_dssp             HHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEEST
T ss_pred             ceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEec
Confidence             11122221   001      2356666678999999999999999988863

>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...

Probab=97.92  E-value=0.011  Score=55.99  Aligned_cols=216  Identities=9%  Similarity=0.066  Sum_probs=132.4

Q ss_pred             CeEEEEecCCceEEEEEecCCCCcceEEEEe---CC-ceEEEEEc----------CCCeEEEEeCCCccccee-cccCCc
Q psy10867         15 GAISVWEPKGGTLLMSYKGASVLSPHSMCLL---GN-DYVLGVEK----------GKPMIQAWPVNSQEKAQL-RLICPG   79 (343)
Q Consensus        15 g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~---~~-~~~~~~~~----------~~~~i~iw~~~~~~~~~~-~~~~~~   79 (343)
                      +.|++.|..+.+.+..++-..+-.+.+++.-   .+ ..+++.|.          ..|.|.+|++..++.... ....++
T Consensus       807 s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g  886 (1158)
T 3ei3_A          807 HNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKG  886 (1158)
T ss_dssp             EEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEESS
T ss_pred             EEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcCC
Confidence            5689999988888887776554356666543   22 35666654          247899999874433211 124467


Q ss_pred             ceEEEEECCCCCEEEEecCCeEEEEEccCCceEE-EecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeee
Q psy10867         80 RISSMQASPDAAYIAVSIETKLHMWQISSGRLLA-TASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVA  158 (343)
Q Consensus        80 ~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~  158 (343)
                      +|++++-- +| +|+++....|++|++...+.+. ....+. .|..+.....+++++.|..-..|.+...+....  .+ 
T Consensus       887 ~v~al~~~-~g-~Lla~ig~~l~vy~l~~~~~L~~~~~~~~-~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~~--~L-  960 (1158)
T 3ei3_A          887 AVYSMVEF-NG-KLLASINSTVRLYEWTTEKELRTECNHYN-NIMALYLKTKGDFILVGDLMRSVLLLAYKPMEG--NF-  960 (1158)
T ss_dssp             CEEEEEEE-TT-EEEEEETTEEEEEEECTTSCEEEEEEECC-CSCEEEEEEETTEEEEEESSBCEEEEEEETTTT--EE-
T ss_pred             cCEEEeee-CC-EEEEEcCCEEEEEECCCCceEEEEeeccc-cEEEEEEeccCCEEEEEEhhheEEEEEEEcCCC--eE-
Confidence            88888744 45 5666677999999998765444 121122 233333333577888888777777665432210  00 


Q ss_pred             cCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCC-------ce---EEEeecCCc
Q psy10867        159 FGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTG-------ED---LLSLILDTR  228 (343)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~-------~~---~~~~~~~~~  228 (343)
                                      ...........++++.+-.++   .++.+..+|.+.++.....       +.   ...+.....
T Consensus       961 ----------------~~~a~D~~~~~vta~~~ld~~---t~l~aD~~gNl~vl~~~~~~~~~~~~~~L~~~~~fhlG~~ 1021 (1158)
T 3ei3_A          961 ----------------EEIARDFNPNWMSAVEILDDD---NFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEF 1021 (1158)
T ss_dssp             ----------------EEEEECCSCBCEEEEEEEETT---EEEEEETTSEEEEEEECTTCCSTTGGGBEEEEEEEECSSC
T ss_pred             ----------------EEEEeecccccEEEEEEEccC---cEEEEcCCCcEEEEecCCCCCCccccceeeeEEEEeCCCc
Confidence                            111223456678888888765   6777899999999865431       11   233445667


Q ss_pred             EEEEEE---cCC---------CCEEEEEcCCCcEEEEEe
Q psy10867        229 LTCVAF---DGT---------EDNIYMGTSEGVIKSFCL  255 (343)
Q Consensus       229 i~~~~~---~~~---------~~~l~~~~~d~~i~i~d~  255 (343)
                      ++++.-   .+.         ...++.++.+|.|.+.-.
T Consensus      1022 vt~~~~~sl~~~~~~~~~~~~~~~il~~T~~GsIg~l~p 1060 (1158)
T 3ei3_A         1022 VNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTS 1060 (1158)
T ss_dssp             EEEEEECCSCCC-------CEEEEEEEEETTSCEEEEEE
T ss_pred             EeeEEeeeeecCCCccccccccceEEEEecCCEEEEEEE
Confidence            877763   332         235777888999887643

>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}

Probab=97.87  E-value=0.0043  Score=49.30  Aligned_cols=213  Identities=8%  Similarity=0.002  Sum_probs=103.4

Q ss_pred             CeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCC-----CeEEEEeCCCcc---cceecc--cCCcceEEE
Q psy10867         15 GAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGK-----PMIQAWPVNSQE---KAQLRL--ICPGRISSM   84 (343)
Q Consensus        15 g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-----~~i~iw~~~~~~---~~~~~~--~~~~~v~~~   84 (343)
                      ..+.++|+.+.+-...-.......-.+++.. ++.+++.|..+     ..+.+||..+.+   ......  ........+
T Consensus        31 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~  109 (301)
T 2vpj_A           31 DVVEKYDPKTQEWSFLPSITRKRRYVASVSL-HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGAT  109 (301)
T ss_dssp             CCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEE
T ss_pred             eEEEEEcCCCCeEEeCCCCChhhccccEEEE-CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEE
Confidence            4788999887654332111111022333333 45555555432     368899988776   332211  111122222


Q ss_pred             EECCCCCEEEE-ec-----CCeEEEEEccCCceEE--EecccCCCeEEEEEecCCCEEEEecCC-----CeEEEeecCcc
Q psy10867         85 QASPDAAYIAV-SI-----ETKLHMWQISSGRLLA--TASSHYQPITIVKWSADSNFIVTGGED-----GTICVWQLSRL  151 (343)
Q Consensus        85 ~~s~~~~~l~~-~~-----d~~i~v~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~  151 (343)
                      .+  ++++++. |.     ...+.+||+.+.+-..  .+.........+.  .+++.++.|+.+     ..+.+||+.+.
T Consensus       110 ~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~d~~~~  185 (301)
T 2vpj_A          110 TL--GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVV--ASGVIYCLGGYDGLNILNSVEKYDPHTG  185 (301)
T ss_dssp             EE--TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEETTTT
T ss_pred             EE--CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEE--ECCEEEEECCCCCCcccceEEEEeCCCC
Confidence            22  5666665 33     2469999988775433  2221111122222  267777777754     35788888775


Q ss_pred             ceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCC-----CeEEEEecCCCceEEEeecC
Q psy10867        152 ICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHD-----RTCKIFDLCTGEDLLSLILD  226 (343)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d-----~~i~~wd~~~~~~~~~~~~~  226 (343)
                      .-...                    ..+.........+. . ++  .+++.|+.+     ..+.+||+.+.+-...-..+
T Consensus       186 ~W~~~--------------------~~~p~~r~~~~~~~-~-~~--~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p  241 (301)
T 2vpj_A          186 HWTNV--------------------TPMATKRSGAGVAL-L-ND--HIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMT  241 (301)
T ss_dssp             EEEEE--------------------CCCSSCCBSCEEEE-E-TT--EEEEECCBCSSSBCCCEEEEETTTTEEEEECCCS
T ss_pred             cEEeC--------------------CCCCcccccceEEE-E-CC--EEEEEeCCCCCcccceEEEEeCCCCcEEECCCCC
Confidence            32211                    11111111111222 2 34  677777764     46889998876543322211


Q ss_pred             --CcEEEEEEcCCCCEEEEEcCCC-----cEEEEEeec
Q psy10867        227 --TRLTCVAFDGTEDNIYMGTSEG-----VIKSFCLRQ  257 (343)
Q Consensus       227 --~~i~~~~~~~~~~~l~~~~~d~-----~i~i~d~~~  257 (343)
                        ..-.+++.. +++.++.|+.++     .+.+||+.+
T Consensus       242 ~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~  278 (301)
T 2vpj_A          242 TPRCYVGATVL-RGRLYAIAGYDGNSLLSSIECYDPII  278 (301)
T ss_dssp             SCCBSCEEEEE-TTEEEEECCBCSSSBEEEEEEEETTT
T ss_pred             CcccceeEEEE-CCEEEEEcCcCCCcccccEEEEcCCC
Confidence              111122222 566666666543     455666543

>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A

Probab=97.85  E-value=0.0029  Score=51.92  Aligned_cols=171  Identities=11%  Similarity=0.120  Sum_probs=101.8

Q ss_pred             CCCCCEEEEecCCeEEEEEccCCceEEEeccc----CCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCC
Q psy10867         87 SPDAAYIAVSIETKLHMWQISSGRLLATASSH----YQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIP  162 (343)
Q Consensus        87 s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~  162 (343)
                      ..+|.-++...++.||.-++..+..-+.+...    -..+..+..+|+|++|+..+. ..|.|-.+..+..         
T Consensus        29 ~~n~t~i~~a~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~---------   98 (452)
T 3pbp_A           29 SQNGTRIVFIQDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFND-NEIFVMEVPWGYS---------   98 (452)
T ss_dssp             ETTTTEEEEEETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECS-SEEEEEECCTTCS---------
T ss_pred             EcCCCEEEEEECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecC-CeEEEEEecCccc---------
Confidence            34677777777888998888755433444322    235788999999999998865 5788888764210         


Q ss_pred             CCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCCcEEEEEEcCC---CC
Q psy10867        163 GSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGT---ED  239 (343)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~---~~  239 (343)
                                          ...         +  ..+   ..-=.++-|.+...+    .....+|..+.|+|-   +.
T Consensus        99 --------------------~~~---------~--~~~---~~~~q~~ty~l~~~~----~~~~s~I~qVlWHPl~~~ds  140 (452)
T 3pbp_A           99 --------------------NVE---------D--VSI---QDAFQIFHYSIDEEE----VGPKSSIKKVLFHPKSYRDS  140 (452)
T ss_dssp             --------------------CCC---------C--HHH---HHTTEEEEEEGGGCC------CCCCEEEEEECTTBGGGC
T ss_pred             --------------------cCc---------c--ccc---ccccceeEEEcCCcc----cCCCCceeEEEeccccCCCC
Confidence                                000         0  000   000113334443211    124678999999995   56


Q ss_pred             EEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEe--CCCcEEEE
Q psy10867        240 NIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSS--ADETLKIW  306 (343)
Q Consensus       240 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~--~dg~i~iw  306 (343)
                      .|++-..|+.|++||+........ .+........+......|.+++|.+++-.|...+  ..|.|+-.
T Consensus       141 ~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAl  208 (452)
T 3pbp_A          141 CIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFAF  208 (452)
T ss_dssp             EEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred             eEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence            899999999999999986221111 1111111112223336788999999876666544  77776543

>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}

Probab=97.83  E-value=0.0072  Score=48.11  Aligned_cols=225  Identities=7%  Similarity=0.057  Sum_probs=111.0

Q ss_pred             ceEEEEEcC--CCeEEEEeCCCcccceecc--cCCcceEEEEECCCCCEEEE-ecC----CeEEEEEccCCceEEE--ec
Q psy10867         48 DYVLGVEKG--KPMIQAWPVNSQEKAQLRL--ICPGRISSMQASPDAAYIAV-SIE----TKLHMWQISSGRLLAT--AS  116 (343)
Q Consensus        48 ~~~~~~~~~--~~~i~iw~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~-~~d----~~i~v~~~~~~~~~~~--~~  116 (343)
                      +.+++.|..  ...+.+||..+.+......  ........+.  .++.+++. |.+    ..+.+||+.+++-...  +.
T Consensus        12 ~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p   89 (306)
T 3ii7_A           12 DYRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVF--WDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPP   89 (306)
T ss_dssp             CEEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEE--ETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCS
T ss_pred             ceEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEE--ECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCC
Confidence            344544432  2578899988766543221  1111222222  25555554 433    5799999988754332  22


Q ss_pred             ccCCCeEEEEEecCCCEEEEecCC------CeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEE
Q psy10867        117 SHYQPITIVKWSADSNFIVTGGED------GTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVT  190 (343)
Q Consensus       117 ~~~~~v~~~~~~~~~~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  190 (343)
                      ........+.+  +++.++.|+.+      ..+.+||+.+..-...                    ..+......- +++
T Consensus        90 ~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~--------------------~~~p~~r~~~-~~~  146 (306)
T 3ii7_A           90 TPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTK--------------------PSMLTQRCSH-GMV  146 (306)
T ss_dssp             SCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEE--------------------CCCSSCCBSC-EEE
T ss_pred             ccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeC--------------------CCCcCCccee-EEE
Confidence            11112222222  67777777754      4588888877532211                    0111111111 112


Q ss_pred             eecCCCceEEEEeeC---------CCeEEEEecCCCceEEEeecCC--cEEEEEEcCCCCEEEEEcCC-----CcEEEEE
Q psy10867        191 LSKLGAKSRVASVSH---------DRTCKIFDLCTGEDLLSLILDT--RLTCVAFDGTEDNIYMGTSE-----GVIKSFC  254 (343)
Q Consensus       191 ~~~~~~~~~l~~~~~---------d~~i~~wd~~~~~~~~~~~~~~--~i~~~~~~~~~~~l~~~~~d-----~~i~i~d  254 (343)
                      . -++  .+++.|+.         -..+.+||+.+.+-...-....  .-.+++.. +++.++.|+.+     ..+.+||
T Consensus       147 ~-~~~--~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~yd  222 (306)
T 3ii7_A          147 E-ANG--LIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV-KDKIFAVGGQNGLGGLDNVEYYD  222 (306)
T ss_dssp             E-ETT--EEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCEETTEEBCCEEEEE
T ss_pred             E-ECC--EEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEE-CCEEEEEeCCCCCCCCceEEEee
Confidence            2 244  56666654         3458899988764332222111  11122222 56666666653     3577888


Q ss_pred             eecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCC-----CcEEEEecccce
Q psy10867        255 LRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSAD-----ETLKIWHTISRQ  312 (343)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d-----g~i~iwd~~~~~  312 (343)
                      +.+..=..         +..+.........+.+  ++++++.|+.+     ..+.+||+.+.+
T Consensus       223 ~~~~~W~~---------~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~  274 (306)
T 3ii7_A          223 IKLNEWKM---------VSPMPWKGVTVKCAAV--GSIVYVLAGFQGVGRLGHILEYNTETDK  274 (306)
T ss_dssp             TTTTEEEE---------CCCCSCCBSCCEEEEE--TTEEEEEECBCSSSBCCEEEEEETTTTE
T ss_pred             CCCCcEEE---------CCCCCCCccceeEEEE--CCEEEEEeCcCCCeeeeeEEEEcCCCCe
Confidence            76532110         1111111122222333  67778888754     468889987754

>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*

Probab=97.79  E-value=0.0043  Score=45.97  Aligned_cols=133  Identities=8%  Similarity=-0.052  Sum_probs=81.4

Q ss_pred             cceEEEecCCCCeEEEEecCCce------EEEEEecC-CCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceeccc
Q psy10867          4 LNEVAFSYDGSGAISVWEPKGGT------LLMSYKGA-SVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLI   76 (343)
Q Consensus         4 v~~~~~s~~~dg~i~iwd~~~~~------~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~   76 (343)
                      -+.|++.-+.| +++.=...++.      ...++-.. =. .+..++|+|+|.+.++ .. |.+.-.+..+......+ .
T Consensus         3 ~~~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~-~~~~laf~P~G~LYaV-~~-G~Ly~~~~~t~~~~~W~-~   77 (236)
T 1tl2_A            3 GESMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWS-NFKFLFLSPGGELYGV-LN-DKIYKGTPPTHDNDNWM-G   77 (236)
T ss_dssp             CCCCEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCT-TCSEEEECTTSCEEEE-ET-TEEEEESCCCSTTCCHH-H
T ss_pred             cceEEEEEeCC-cEEecCCCCCcccchhhhccccCccccc-cceeEEECCCccEEEE-eC-CeEEEECCCCCCccccc-c
Confidence            34566666666 66665554433      12222221 23 6789999999998888 44 77766665543322111 1


Q ss_pred             CCcc--------eEEEEECCCCCEEEEecCCeEEEEEccCCce-------EEEecccCCCeEEEEEecCCCEEEEecCCC
Q psy10867         77 CPGR--------ISSMQASPDAAYIAVSIETKLHMWQISSGRL-------LATASSHYQPITIVKWSADSNFIVTGGEDG  141 (343)
Q Consensus        77 ~~~~--------v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~-------~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg  141 (343)
                      ....        ..++.|.|+|.+.++ .||.|+-++..+...       ...-..--..+..|.+.|+|.+.+..  |+
T Consensus        78 s~t~IG~~Gw~~F~a~~fD~~G~LYav-~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg  154 (236)
T 1tl2_A           78 RAKKIGNGGWNQFQFLFFDPNGYLYAV-SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQ  154 (236)
T ss_dssp             HCEEEECSCGGGCSEEEECTTSCEEEE-ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TT
T ss_pred             cccEecccccccceEEEECCCCCEEEe-CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CC
Confidence            1222        378999999999988 679988887643211       11111112467999999999977776  77


Q ss_pred             eEE
Q psy10867        142 TIC  144 (343)
Q Consensus       142 ~i~  144 (343)
                      .+.
T Consensus       155 ~ly  157 (236)
T 1tl2_A          155 QFY  157 (236)
T ss_dssp             EEE
T ss_pred             cEE
Confidence            754

>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}

Probab=97.69  E-value=0.013  Score=47.20  Aligned_cols=248  Identities=8%  Similarity=-0.038  Sum_probs=130.8

Q ss_pred             cCCcceEEEEECCCCCEEEEec-CCeEEEEEccCCceE--EEec----ccCCCeEEEEEecC---CCEEEEe---cCCCe
Q psy10867         76 ICPGRISSMQASPDAAYIAVSI-ETKLHMWQISSGRLL--ATAS----SHYQPITIVKWSAD---SNFIVTG---GEDGT  142 (343)
Q Consensus        76 ~~~~~v~~~~~s~~~~~l~~~~-d~~i~v~~~~~~~~~--~~~~----~~~~~v~~~~~~~~---~~~l~s~---~~dg~  142 (343)
                      ..-.....|+|.|||.++++.. .|.|++++..+++..  ..+.    ...+....|+++|+   +..|+..   ..++.
T Consensus        29 ~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~  108 (347)
T 3das_A           29 TGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNR  108 (347)
T ss_dssp             CCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEE
T ss_pred             cCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCE
Confidence            3345678999999999999876 899999987666532  2221    23456789999995   3334332   23455


Q ss_pred             EEEeecCccceeeeeecCCCCCCCCccccccceeeeec-ccccceEEEEeecCCCceEEEEeeC-------------CCe
Q psy10867        143 ICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKS-QHSLPVTHVTLSKLGAKSRVASVSH-------------DRT  208 (343)
Q Consensus       143 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~l~~~~~-------------d~~  208 (343)
                      |.-|.+......           ..........+..+. .....-..|.|.|++  .+.++.+.             .|.
T Consensus       109 v~R~~~~~~~~~-----------~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG--~Lyvt~Gd~~~~~~~qd~~~~~G~  175 (347)
T 3das_A          109 IVRMLYDEKKPS-----------GEQLGAPDTVFRGIPKGVIHNGGRIAFGPDK--MLYAGTGESGDTGLSQDRKSLGGK  175 (347)
T ss_dssp             EEEEEBCTTSCT-----------TCCBCCCEEEEEEECCCSSCCCCCEEECTTS--CEEEECBCTTCGGGTTCTTCSTTC
T ss_pred             EEEEEeCCCCcc-----------cccCCCcEEEEEcCCCCCCccCccccCCCCC--CEEEEECCCCCCccccCCCCCCCE
Confidence            665655432100           000000001111111 112234679999998  66666432             355


Q ss_pred             EEEEecCCC---------ceEEEeecCCcEEEEEEcCCCCEEEEE-cCCCcEEEEEeecccccccccc--------cCCC
Q psy10867        209 CKIFDLCTG---------EDLLSLILDTRLTCVAFDGTEDNIYMG-TSEGVIKSFCLRQVPRTRDHHI--------QDST  270 (343)
Q Consensus       209 i~~wd~~~~---------~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~--------~~~~  270 (343)
                      |.-.+....         ..+... .......++|+|++.+.++- +.++.=.|--+.....- -+..        ....
T Consensus       176 IlRi~~dG~ip~~nPf~~~~i~a~-G~RNp~Gla~dp~G~L~~~d~g~~~~deln~i~~G~ny-GwP~~~g~~~~~~~~~  253 (347)
T 3das_A          176 ILRMTPDGEPAPGNPFPGSPVYSY-GHRNVQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNY-GWPEAEGKGGGSGFHD  253 (347)
T ss_dssp             EEEECTTSSBCTTCSSTTCCEEEB-CCSBCCEEEECTTCCEEEEECCSSSCEEEEEECTTCBC-CTTTCCSSCCCTTCCC
T ss_pred             EEEEeCCCCccCCCCCCCCeEEee-CCCCcceEEECCCCCEEEEecCCCCCceeeEEcCCCEe-cCCcccCCCCCccccC
Confidence            555554321         112222 22346678999987765553 22332222222222110 0000        0011


Q ss_pred             CCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceee----eecc-cCCceEEEEEccCCCeeeecc
Q psy10867        271 SNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCL----RTIQ-HKGPVLGAFLGLLPPAIHDYD  339 (343)
Q Consensus       271 ~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~----~~~~-~~~~v~~~~~sp~~~~l~~~~  339 (343)
                      ++..+..+......++|. ++..+...-..+.|....+.....+    ..+. ..+.+.+++..|||...++.+
T Consensus       254 P~~~~~~~~~ap~G~~~~-~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv~td  326 (347)
T 3das_A          254 PVAQWSTDEASPSGIAYA-EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLWLVTS  326 (347)
T ss_dssp             CSEEECTTTCCEEEEEEE-TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEEEEEC
T ss_pred             CcEecCCCCCCCcceEEE-cCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEEEEEc
Confidence            222232222456778876 4666666555667766676554322    2233 457899999999998877654

>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}

Probab=97.69  E-value=0.013  Score=47.20  Aligned_cols=245  Identities=13%  Similarity=0.097  Sum_probs=130.3

Q ss_pred             EEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCccccee------cccCCcceEEEEECCC----CCEEEE-e
Q psy10867         28 LMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQL------RLICPGRISSMQASPD----AAYIAV-S   96 (343)
Q Consensus        28 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~------~~~~~~~v~~~~~s~~----~~~l~~-~   96 (343)
                      +..+...-. ....|+|.|||.++++....|.|++++..+++....      ..........|+|+|+    +.+.++ +
T Consensus        24 ~~~va~gL~-~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt  102 (347)
T 3das_A           24 LRTVATGLN-SPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFT  102 (347)
T ss_dssp             EEEEECCCS-SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEE
T ss_pred             eEEeecCCC-CceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEe
Confidence            334444444 789999999999999888559999998665543211      1233567899999995    444443 2


Q ss_pred             --cCCeEEEEEccCC----------ceE-EEec-ccCCCeEEEEEecCCCEEEEecCC-------------CeEEEeecC
Q psy10867         97 --IETKLHMWQISSG----------RLL-ATAS-SHYQPITIVKWSADSNFIVTGGED-------------GTICVWQLS  149 (343)
Q Consensus        97 --~d~~i~v~~~~~~----------~~~-~~~~-~~~~~v~~~~~~~~~~~l~s~~~d-------------g~i~iwd~~  149 (343)
                        .++.|.-|.+..+          +.+ ..+. .....-..|.|.|||.+.++.+..             |.|.-.+..
T Consensus       103 ~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~d  182 (347)
T 3das_A          103 SASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPD  182 (347)
T ss_dssp             CSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTT
T ss_pred             cCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCC
Confidence              3556777766542          111 1222 111234579999999877775532             333333332


Q ss_pred             ccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEe-eCCCeEEEEecCCCc----------
Q psy10867        150 RLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASV-SHDRTCKIFDLCTGE----------  218 (343)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~-~~d~~i~~wd~~~~~----------  218 (343)
                      ...           ...+...   .....-.+|. ....++|+|++  .++++- +.++.=.|--+..+.          
T Consensus       183 G~i-----------p~~nPf~---~~~i~a~G~R-Np~Gla~dp~G--~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~  245 (347)
T 3das_A          183 GEP-----------APGNPFP---GSPVYSYGHR-NVQGLAWDDKQ--RLFASEFGQDTWDELNAIKPGDNYGWPEAEGK  245 (347)
T ss_dssp             SSB-----------CTTCSST---TCCEEEBCCS-BCCEEEECTTC--CEEEEECCSSSCEEEEEECTTCBCCTTTCCSS
T ss_pred             CCc-----------cCCCCCC---CCeEEeeCCC-CcceEEECCCC--CEEEEecCCCCCceeeEEcCCCEecCCcccCC
Confidence            110           0000000   0111122443 35578999976  444432 223222222222221          


Q ss_pred             --------eEEEeecC-CcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEcc
Q psy10867        219 --------DLLSLILD-TRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSI  289 (343)
Q Consensus       219 --------~~~~~~~~-~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~  289 (343)
                              .+..+.+. .....++|. ++..+...-..+.|....+.......       +....+.+....+..++..|
T Consensus       246 ~~~~~~~~P~~~~~~~~~ap~G~~~~-~g~~~~~~l~~~~l~~v~~~~~~~~~-------~~e~~l~~~~gR~~dv~~~p  317 (347)
T 3das_A          246 GGGSGFHDPVAQWSTDEASPSGIAYA-EGSVWMAGLRGERLWRIPLKGTAAAA-------DPQAFLEGEYGRLRTVAPAG  317 (347)
T ss_dssp             CCCTTCCCCSEEECTTTCCEEEEEEE-TTEEEEEESTTCSEEEEEEETTEESS-------CCEEESTTTSSCEEEEEEEE
T ss_pred             CCCccccCCcEecCCCCCCCcceEEE-cCceeeccccCCEEEEEEecCCceec-------ceEEeecCCCCCccEEEECC
Confidence                    12222222 355677776 35556666666777777776532111       00112233456799999999


Q ss_pred             CCCEEEEEe
Q psy10867        290 TGITLLSSS  298 (343)
Q Consensus       290 ~~~~l~s~~  298 (343)
                      ||.++++..
T Consensus       318 DG~lyv~td  326 (347)
T 3das_A          318 GDKLWLVTS  326 (347)
T ss_dssp             TTEEEEEEC
T ss_pred             CCcEEEEEc
Confidence            998666543

>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}

Probab=97.68  E-value=0.013  Score=46.56  Aligned_cols=216  Identities=10%  Similarity=0.089  Sum_probs=103.7

Q ss_pred             CeEEEEeCCCcccceecc--cCCcceEEEEECCCCCEEEE-ecC-----CeEEEEEccCCceEEEe--cccCCCeEEEEE
Q psy10867         58 PMIQAWPVNSQEKAQLRL--ICPGRISSMQASPDAAYIAV-SIE-----TKLHMWQISSGRLLATA--SSHYQPITIVKW  127 (343)
Q Consensus        58 ~~i~iw~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~-~~d-----~~i~v~~~~~~~~~~~~--~~~~~~v~~~~~  127 (343)
                      ..+..||..+.+......  .....-..+.+  ++.+++. |.+     ..+.+||+.+.+-...-  .........+. 
T Consensus        30 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-  106 (302)
T 2xn4_A           30 RSVECYDFKEERWHQVAELPSRRCRAGMVYM--AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAV-  106 (302)
T ss_dssp             CCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-
T ss_pred             CcEEEEcCcCCcEeEcccCCcccccceEEEE--CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEE-
Confidence            357888888765443211  11111122222  5665555 433     36889998877543322  11111122222 


Q ss_pred             ecCCCEEEEecCCC-----eEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEE
Q psy10867        128 SADSNFIVTGGEDG-----TICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVAS  202 (343)
Q Consensus       128 ~~~~~~l~s~~~dg-----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~  202 (343)
                       -+++.++.|+.++     .+.+||+.+..-...                    ..+....... +++.. ++  .+++.
T Consensus       107 -~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~--------------------~~~p~~r~~~-~~~~~-~~--~iyv~  161 (302)
T 2xn4_A          107 -LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHV--------------------APMNTRRSSV-GVGVV-GG--LLYAV  161 (302)
T ss_dssp             -ETTEEEEEEEECSSCEEEEEEEEETTTTEEEEE--------------------CCCSSCCBSC-EEEEE-TT--EEEEE
T ss_pred             -ECCEEEEEcCCCCCccCceEEEEeCCCCeEeec--------------------CCCCCcccCc-eEEEE-CC--EEEEE
Confidence             2667777777543     477788776532211                    1111111111 12222 34  56676


Q ss_pred             eeCC-------CeEEEEecCCCceEEEeecC--CcEEEEEEcCCCCEEEEEcCC-----CcEEEEEeecccccccccccC
Q psy10867        203 VSHD-------RTCKIFDLCTGEDLLSLILD--TRLTCVAFDGTEDNIYMGTSE-----GVIKSFCLRQVPRTRDHHIQD  268 (343)
Q Consensus       203 ~~~d-------~~i~~wd~~~~~~~~~~~~~--~~i~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~~~~  268 (343)
                      |+.+       ..+.+||+.+.+-...-..+  ..-.+++.. +++.++.|+.+     ..+.+||+.+..=..      
T Consensus       162 GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~------  234 (302)
T 2xn4_A          162 GGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL-NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQ------  234 (302)
T ss_dssp             CCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCBSSSSBCCCEEEEETTTTEEEE------
T ss_pred             eCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEE-CCEEEEECCCCCCcccceEEEEeCCCCCEee------
Confidence            6542       45888998776533321111  111122222 46667777654     368888876532111      


Q ss_pred             CCCCCccccccCcEEEEEEccCCCEEEEEeCCC-----cEEEEeccccee
Q psy10867        269 STSNPDFIGHEKQVTSLSCSITGITLLSSSADE-----TLKIWHTISRQC  313 (343)
Q Consensus       269 ~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg-----~i~iwd~~~~~~  313 (343)
                         +..+.........+.  .++++++.|+.++     .+.+||+.+.+-
T Consensus       235 ---~~~~~~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W  279 (302)
T 2xn4_A          235 ---VADMNMCRRNAGVCA--VNGLLYVVGGDDGSCNLASVEYYNPTTDKW  279 (302)
T ss_dssp             ---ECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTTTEE
T ss_pred             ---CCCCCCccccCeEEE--ECCEEEEECCcCCCcccccEEEEcCCCCeE
Confidence               001111111111222  3677778887653     489999877643

>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A

Probab=97.65  E-value=0.013  Score=55.70  Aligned_cols=232  Identities=9%  Similarity=0.112  Sum_probs=130.4

Q ss_pred             CeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEEecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEe
Q psy10867         58 PMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTG  137 (343)
Q Consensus        58 ~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~  137 (343)
                      ..|.|.|+.++..+...   +-.--+.-.+|..+.+|.-...+++|+|+++...+....- ..+|.-=.|-. .+.|+..
T Consensus        48 ~~vvIidl~~~~~~~rr---pi~AdsAIMnP~~~iiALrag~~lQiFnl~~k~klks~~~-~e~VvfWkWis-~~~l~lV  122 (1630)
T 1xi4_A           48 AQVVIIDMNDPSNPIRR---PISADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTM-TDDVTFWKWIS-LNTVALV  122 (1630)
T ss_pred             ceEEEEECCCCCCcccc---cccchhhccCCCcceEEEecCCeEEEeehHHhhhhccccc-CCCceEEEecC-CCeeEEE
Confidence            47889998886654222   1122344568888888875578999999998877766653 34565556643 3344444


Q ss_pred             cCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeeccc----ccceEEEEeecCCCceEEEEee-------CC
Q psy10867        138 GEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQH----SLPVTHVTLSKLGAKSRVASVS-------HD  206 (343)
Q Consensus       138 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~~l~~~~-------~d  206 (343)
                      +. ..|..|++....                     .|.+.+..|    ...|..-..+++.  ++++..+       -.
T Consensus       123 T~-~aVyHW~~~~~s---------------------~P~k~fdR~~~L~~~QIinY~~d~~~--kW~~l~gi~~~~~~v~  178 (1630)
T 1xi4_A          123 TD-NAVYHWSMEGES---------------------QPVKMFDRHSSLAGCQIINYRTDAKQ--KWLLLTGISAQQNRVV  178 (1630)
T ss_pred             cC-CeEEEeccCCCC---------------------ccHHHHhcchhcccCeeEEeeeCCCC--CeEEEEeeccCCCccc
Confidence            43 579999996521                     133333333    4556666777776  5655332       35


Q ss_pred             CeEEEEecCCCceEEEeecCCcEEEEEEc--CCCCEEEE-Ec---CCCcEEEEEeecc-cccccccccCCCCCCcccccc
Q psy10867        207 RTCKIFDLCTGEDLLSLILDTRLTCVAFD--GTEDNIYM-GT---SEGVIKSFCLRQV-PRTRDHHIQDSTSNPDFIGHE  279 (343)
Q Consensus       207 ~~i~~wd~~~~~~~~~~~~~~~i~~~~~~--~~~~~l~~-~~---~d~~i~i~d~~~~-~~~~~~~~~~~~~~~~~~~~~  279 (343)
                      |.+.+|..+.+....--.|-.....+...  +....|++ +.   ..++++|.++... .....+..........-....
T Consensus       179 G~mQLyS~er~~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~  258 (1630)
T 1xi4_A          179 GAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQN  258 (1630)
T ss_pred             ceeeeeecccccchhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCccccc
Confidence            88899987654321111121111111111  11111222 21   1368899888653 111111000000000001123


Q ss_pred             CcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc
Q psy10867        280 KQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ  318 (343)
Q Consensus       280 ~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~  318 (343)
                      +-..++..++.-..+..-+.-|.|.+||+.+|.++..-+
T Consensus       259 Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~r  297 (1630)
T 1xi4_A          259 DFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNR  297 (1630)
T ss_pred             CcceEEEeccccCEEEEEecCceEEEEecccchhhhhcc
Confidence            345677888888888888899999999999998876554

>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}

Probab=97.65  E-value=0.012  Score=46.72  Aligned_cols=213  Identities=12%  Similarity=0.084  Sum_probs=103.3

Q ss_pred             CeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCC-----CeEEEEeCCCcccceecc--cCCcceEEEEEC
Q psy10867         15 GAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGK-----PMIQAWPVNSQEKAQLRL--ICPGRISSMQAS   87 (343)
Q Consensus        15 g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-----~~i~iw~~~~~~~~~~~~--~~~~~v~~~~~s   87 (343)
                      ..+.++|+.+.+-...-.......-.+++.. ++.+++.|..+     ..+.+||..+.+......  ........+.+ 
T Consensus        30 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-  107 (302)
T 2xn4_A           30 RSVECYDFKEERWHQVAELPSRRCRAGMVYM-AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVL-  107 (302)
T ss_dssp             CCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-
T ss_pred             CcEEEEcCcCCcEeEcccCCcccccceEEEE-CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEE-
Confidence            4688899887653332111111012233333 55555555422     358889988766443221  11111222222 


Q ss_pred             CCCCEEEE-ecC-----CeEEEEEccCCceEEE--ecccCCCeEEEEEecCCCEEEEecCC-------CeEEEeecCccc
Q psy10867         88 PDAAYIAV-SIE-----TKLHMWQISSGRLLAT--ASSHYQPITIVKWSADSNFIVTGGED-------GTICVWQLSRLI  152 (343)
Q Consensus        88 ~~~~~l~~-~~d-----~~i~v~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~s~~~d-------g~i~iwd~~~~~  152 (343)
                       ++++++. |.+     ..+.+||+.+.+-...  +....... +++. -+++.++.|+.+       ..+.+||+.+..
T Consensus       108 -~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~  184 (302)
T 2xn4_A          108 -NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSV-GVGV-VGGLLYAVGGYDVASRQCLSTVECYNATTNE  184 (302)
T ss_dssp             -TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSC-EEEE-ETTEEEEECCEETTTTEECCCEEEEETTTTE
T ss_pred             -CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCc-eEEE-ECCEEEEEeCCCCCCCccccEEEEEeCCCCc
Confidence             5555554 443     3588899887754332  21111112 2222 266777777642       347888887653


Q ss_pred             eeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCC-----CeEEEEecCCCceEEEeecC-
Q psy10867        153 CKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHD-----RTCKIFDLCTGEDLLSLILD-  226 (343)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d-----~~i~~wd~~~~~~~~~~~~~-  226 (343)
                      -...                    ..+....... +++.. ++  .+++.|+.+     ..+.+||+.+.+-...-... 
T Consensus       185 W~~~--------------------~~~p~~r~~~-~~~~~-~~--~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~  240 (302)
T 2xn4_A          185 WTYI--------------------AEMSTRRSGA-GVGVL-NN--LLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNM  240 (302)
T ss_dssp             EEEE--------------------CCCSSCCBSC-EEEEE-TT--EEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSS
T ss_pred             EEEC--------------------CCCccccccc-cEEEE-CC--EEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCC
Confidence            2211                    1111111111 22222 34  677777764     46889998876533222211 


Q ss_pred             -CcEEEEEEcCCCCEEEEEcCCC-----cEEEEEeec
Q psy10867        227 -TRLTCVAFDGTEDNIYMGTSEG-----VIKSFCLRQ  257 (343)
Q Consensus       227 -~~i~~~~~~~~~~~l~~~~~d~-----~i~i~d~~~  257 (343)
                       ..-..++. -+++.++.|+.++     .+.+||+.+
T Consensus       241 ~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~  276 (302)
T 2xn4_A          241 CRRNAGVCA-VNGLLYVVGGDDGSCNLASVEYYNPTT  276 (302)
T ss_dssp             CCBSCEEEE-ETTEEEEECCBCSSSBCCCEEEEETTT
T ss_pred             ccccCeEEE-ECCEEEEECCcCCCcccccEEEEcCCC
Confidence             11111222 2566677776543     477787764

>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...

Probab=97.64  E-value=0.046  Score=51.87  Aligned_cols=132  Identities=12%  Similarity=0.137  Sum_probs=82.7

Q ss_pred             CeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccce-ecccCCcceEEEEECCC----
Q psy10867         15 GAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQ-LRLICPGRISSMQASPD----   89 (343)
Q Consensus        15 g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~-~~~~~~~~v~~~~~s~~----   89 (343)
                      ..|++.+...+..+..++...+..|...+.+. ..++++ .. +.+.+++++.++... ....-...|.|+++.|.    
T Consensus       492 ~~Irli~~~~~~~~~~w~~p~~~~I~~As~n~-~~vvva-~g-~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~~~  568 (1158)
T 3ei3_A          492 ASVRLVSQEPKALVSEWKEPQAKNISVASCNS-SQVVVA-VG-RALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSN  568 (1158)
T ss_dssp             SCEEEEESSSCCEEEEECCTTCCCCCEEEECS-SEEEEE-ET-TEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSSST
T ss_pred             CEEEEEECCCCeEEEEEECCCCCEEEEEEeCC-CEEEEE-EC-CEEEEEEeeCCceeeecccCCCCceEEEEeecCCCCc
Confidence            45677776666667777765443677776654 344444 44 788888776543221 11234568999999863    


Q ss_pred             --CCEEEEe-c-CCeEEEEEccCCceEEEecc-cCCCeEEEEEec--CCCEEEEecCCCeEEEeecC
Q psy10867         90 --AAYIAVS-I-ETKLHMWQISSGRLLATASS-HYQPITIVKWSA--DSNFIVTGGEDGTICVWQLS  149 (343)
Q Consensus        90 --~~~l~~~-~-d~~i~v~~~~~~~~~~~~~~-~~~~v~~~~~~~--~~~~l~s~~~dg~i~iwd~~  149 (343)
                        +.+++.+ + |++++|+++.+.+.+....- ......++.+..  ...+|..|-.||.+.-+.+.
T Consensus       569 ~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d  635 (1158)
T 3ei3_A          569 GLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLN  635 (1158)
T ss_dssp             TCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEEEC
T ss_pred             ccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEc
Confidence              3677764 4 89999999987766543221 123445555432  33578889999998766654

>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}

Probab=97.63  E-value=0.011  Score=47.13  Aligned_cols=220  Identities=10%  Similarity=0.050  Sum_probs=107.1

Q ss_pred             EEEecCC--CCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCC----CeEEEEeCCCcccceecc--cCC
Q psy10867          7 VAFSYDG--SGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGK----PMIQAWPVNSQEKAQLRL--ICP   78 (343)
Q Consensus         7 ~~~s~~~--dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~----~~i~iw~~~~~~~~~~~~--~~~   78 (343)
                      +.+-++.  ...+.+||..+++-...-.......-.+++.. ++.+++.|..+    ..+.+||..+.+......  ...
T Consensus        14 l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r   92 (306)
T 3ii7_A           14 RIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFW-DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPR   92 (306)
T ss_dssp             EEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEE-TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCC
T ss_pred             EEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEE-CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccc
Confidence            3444443  36789999887654332111111012233333 55565555432    578889988776443221  111


Q ss_pred             cceEEEEECCCCCEEEE-ecC------CeEEEEEccCCceEEEe--cccCCCeEEEEEecCCCEEEEecC---------C
Q psy10867         79 GRISSMQASPDAAYIAV-SIE------TKLHMWQISSGRLLATA--SSHYQPITIVKWSADSNFIVTGGE---------D  140 (343)
Q Consensus        79 ~~v~~~~~s~~~~~l~~-~~d------~~i~v~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~s~~~---------d  140 (343)
                      .....+.+  ++++++. |.+      ..+.+||+.+.+-...-  .........+.  -+++.++.|+.         -
T Consensus        93 ~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~  168 (306)
T 3ii7_A           93 DSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVE--ANGLIYVCGGSLGNNVSGRVL  168 (306)
T ss_dssp             BSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCEESCTTTCEEC
T ss_pred             cceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEE--ECCEEEEECCCCCCCCccccc
Confidence            11222222  5666554 433      46999999887543321  11111112222  26677777763         3


Q ss_pred             CeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCC-----CeEEEEecC
Q psy10867        141 GTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHD-----RTCKIFDLC  215 (343)
Q Consensus       141 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d-----~~i~~wd~~  215 (343)
                      ..+.+||+.+..-..                    +..+......- ++... ++  .+++.|+.+     ..+.+||+.
T Consensus       169 ~~~~~yd~~~~~W~~--------------------~~~~p~~r~~~-~~~~~-~~--~i~v~GG~~~~~~~~~~~~yd~~  224 (306)
T 3ii7_A          169 NSCEVYDPATETWTE--------------------LCPMIEARKNH-GLVFV-KD--KIFAVGGQNGLGGLDNVEYYDIK  224 (306)
T ss_dssp             CCEEEEETTTTEEEE--------------------ECCCSSCCBSC-EEEEE-TT--EEEEECCEETTEEBCCEEEEETT
T ss_pred             ceEEEeCCCCCeEEE--------------------CCCccchhhcc-eEEEE-CC--EEEEEeCCCCCCCCceEEEeeCC
Confidence            457888887753221                    11111111111 12222 44  677777653     458889987


Q ss_pred             CCceEEEeec--CC-cEEEEEEcCCCCEEEEEcCC-----CcEEEEEeec
Q psy10867        216 TGEDLLSLIL--DT-RLTCVAFDGTEDNIYMGTSE-----GVIKSFCLRQ  257 (343)
Q Consensus       216 ~~~~~~~~~~--~~-~i~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~  257 (343)
                      +.+-...-..  .. ....+.+  +++.++.|+.+     ..+.+||..+
T Consensus       225 ~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~  272 (306)
T 3ii7_A          225 LNEWKMVSPMPWKGVTVKCAAV--GSIVYVLAGFQGVGRLGHILEYNTET  272 (306)
T ss_dssp             TTEEEECCCCSCCBSCCEEEEE--TTEEEEEECBCSSSBCCEEEEEETTT
T ss_pred             CCcEEECCCCCCCccceeEEEE--CCEEEEEeCcCCCeeeeeEEEEcCCC
Confidence            7643221111  11 1222222  56677777644     4566777654

>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A

Probab=97.60  E-value=0.015  Score=46.40  Aligned_cols=226  Identities=10%  Similarity=0.022  Sum_probs=108.5

Q ss_pred             CceEEEEEcC----CCeEEEEeCCCcccceecc--cCCcceEEEEECCCCCEEEE-ec----C-----CeEEEEEccCCc
Q psy10867         47 NDYVLGVEKG----KPMIQAWPVNSQEKAQLRL--ICPGRISSMQASPDAAYIAV-SI----E-----TKLHMWQISSGR  110 (343)
Q Consensus        47 ~~~~~~~~~~----~~~i~iw~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~-~~----d-----~~i~v~~~~~~~  110 (343)
                      ++.+++.|..    -..+.+||..+.+......  ...... +++.. ++.+++. |.    +     ..+.+||+.+.+
T Consensus        24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~  101 (308)
T 1zgk_A           24 GRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGL-AGCVV-GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQ  101 (308)
T ss_dssp             CCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSC-EEEEE-TTEEEEECCEEEETTEEEECCCEEEEETTTTE
T ss_pred             CCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccc-eEEEE-CCEEEEECCCcCCCCCCeecceEEEECCCCCe
Confidence            4455555441    1468899988766543211  111111 22222 5555554 43    2     358899988775


Q ss_pred             eEEEe--cccCCCeEEEEEecCCCEEEEecCC-----CeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccc
Q psy10867        111 LLATA--SSHYQPITIVKWSADSNFIVTGGED-----GTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHS  183 (343)
Q Consensus       111 ~~~~~--~~~~~~v~~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (343)
                      -...-  .........+.+  +++.++.|+.+     ..+.+||+.+.+-...                    ..+....
T Consensus       102 W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~--------------------~~~p~~r  159 (308)
T 1zgk_A          102 WSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLV--------------------APMLTRR  159 (308)
T ss_dssp             EEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEEC--------------------CCCSSCC
T ss_pred             EeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeEC--------------------CCCCccc
Confidence            43321  111112222222  67777777643     3577888876532211                    0111111


Q ss_pred             cceEEEEeecCCCceEEEEeeCC-----CeEEEEecCCCceEEEeec--CCcEEEEEEcCCCCEEEEEcCC-----CcEE
Q psy10867        184 LPVTHVTLSKLGAKSRVASVSHD-----RTCKIFDLCTGEDLLSLIL--DTRLTCVAFDGTEDNIYMGTSE-----GVIK  251 (343)
Q Consensus       184 ~~v~~~~~~~~~~~~~l~~~~~d-----~~i~~wd~~~~~~~~~~~~--~~~i~~~~~~~~~~~l~~~~~d-----~~i~  251 (343)
                      ..-..+.+  ++  .+++.|+.+     ..+.+||+.+.+-...-..  ...-.+++.. +++.++.|+.+     ..+.
T Consensus       160 ~~~~~~~~--~~--~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~  234 (308)
T 1zgk_A          160 IGVGVAVL--NR--LLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL-HNCIYAAGGYDGQDQLNSVE  234 (308)
T ss_dssp             BSCEEEEE--TT--EEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEECCBCSSSBCCCEE
T ss_pred             cceEEEEE--CC--EEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE-CCEEEEEeCCCCCCccceEE
Confidence            11112222  44  677777654     4588899876643221111  1111122222 56666777654     4688


Q ss_pred             EEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCC-----CcEEEEecccce
Q psy10867        252 SFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSAD-----ETLKIWHTISRQ  312 (343)
Q Consensus       252 i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d-----g~i~iwd~~~~~  312 (343)
                      +||+.+..=..         +..+.........+.  -++++++.|+.+     ..+.+||+.+.+
T Consensus       235 ~yd~~~~~W~~---------~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~  289 (308)
T 1zgk_A          235 RYDVETETWTF---------VAPMKHRRSALGITV--HQGRIYVLGGYDGHTFLDSVECYDPDTDT  289 (308)
T ss_dssp             EEETTTTEEEE---------CCCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred             EEeCCCCcEEE---------CCCCCCCccceEEEE--ECCEEEEEcCcCCCcccceEEEEcCCCCE
Confidence            88876532111         111111111112222  266777777754     357788887654

>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}

Probab=97.56  E-value=0.0048  Score=49.55  Aligned_cols=206  Identities=13%  Similarity=0.139  Sum_probs=108.3

Q ss_pred             CCCEEEEecCCeEEEEEccCCceEEEeccc-CCCeEEEEEe--c-CCCEEEEe-cCCCeEEEeecCccceeeeeecCCCC
Q psy10867         89 DAAYIAVSIETKLHMWQISSGRLLATASSH-YQPITIVKWS--A-DSNFIVTG-GEDGTICVWQLSRLICKQTVAFGIPG  163 (343)
Q Consensus        89 ~~~~l~~~~d~~i~v~~~~~~~~~~~~~~~-~~~v~~~~~~--~-~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~~~  163 (343)
                      ++..++++.||.|+-+|..+|+.+-+++.. ..++....-.  + ++..++.. +.||.|..++..++.....+..+   
T Consensus        10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~---   86 (339)
T 2be1_A           10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIR---   86 (339)
T ss_dssp             EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHH---
T ss_pred             CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccc---
Confidence            345666789999999999999998887654 1233221100  1 22333333 68999999998877443322210   


Q ss_pred             CCCCccccccceeeeecccccceEE---EEe-----ecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCCcE------
Q psy10867        164 SSGKGVTGLTEPLHVKSQHSLPVTH---VTL-----SKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRL------  229 (343)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~v~~---~~~-----~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i------  229 (343)
                                    .+. ...++..   ..+     ...+  ..+++|+.+|.+...|+++|+.++.+....+.      
T Consensus        87 --------------~lv-~~SP~~~~~~pvv~~~~~~~~~--g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~  149 (339)
T 2be1_A           87 --------------QLV-STSPLHLKTNIVVNDSGKIVED--EKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQ  149 (339)
T ss_dssp             --------------HHH-TTCSEEEECC----------CC--EEEEECEEEEEEEEEETTTCCEEEEESTTCBCC-----
T ss_pred             --------------cce-eccccccCCCceeecccccccC--CEEEEEecCCEEEEEECCCCcEEEEEecCCCccccccc
Confidence                          000 1111111   000     0022  58899999999999999999999998754321      


Q ss_pred             --EEEEEc-----CCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCcccccc--CcE-EEEEEccCCCEEEEEeC
Q psy10867        230 --TCVAFD-----GTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHE--KQV-TSLSCSITGITLLSSSA  299 (343)
Q Consensus       230 --~~~~~~-----~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~--~~v-~~~~~s~~~~~l~s~~~  299 (343)
                        .|....     ..+..++.+..+..+.+.+ +++. ......      .......  ..+ ..-..+.|+.+ +.++.
T Consensus       150 ~e~~~~~~d~~~d~~~~~v~ig~~~y~v~~~~-~sG~-~W~~~~------s~~~~~~~~~~~~~~~~~s~Dg~~-~~~~~  220 (339)
T 2be1_A          150 SVDCSPEEKIKLQECENMIVIGKTIFELGIHS-YDGA-SYNVTY------STWQQNVLDVPLALQNTFSKDGMC-IAPFR  220 (339)
T ss_dssp             ---------------CCEEEEEEEEEECEECC-TTSC-CCCCEE------EEEECCTTTHHHHTTCSSCSSSCC-EEEET
T ss_pred             ccccccccccccccCCCeEEEecceEEEEEEC-CCCC-eEEEec------ccccccccccccccccccccCCcE-EEECC
Confidence              111111     1235677666666555554 2211 110000      0000000  000 00001234555 44678


Q ss_pred             CCcEEEEecccceeee-ecccCCce
Q psy10867        300 DETLKIWHTISRQCLR-TIQHKGPV  323 (343)
Q Consensus       300 dg~i~iwd~~~~~~~~-~~~~~~~v  323 (343)
                      ||.|.-+|..+|+.+. +.+...++
T Consensus       221 dg~v~A~d~~~G~~~W~~~~l~sPv  245 (339)
T 2be1_A          221 DKSLLASDLDFRIARWVSPTFPGII  245 (339)
T ss_dssp             TTEEEEECSTTCCEEEECCCCSSCE
T ss_pred             CCEEEEEECCCCcEEEEeecCCCCe
Confidence            8899989988888877 44434443

>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A

Probab=97.54  E-value=0.03  Score=47.30  Aligned_cols=102  Identities=13%  Similarity=0.062  Sum_probs=62.9

Q ss_pred             cceEEEEeCCceEEEEEcCCCeEEEEeCCCcccce--ecc------cCCcceEEEEECCC----CCEEEE-ec-------
Q psy10867         38 SPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQ--LRL------ICPGRISSMQASPD----AAYIAV-SI-------   97 (343)
Q Consensus        38 ~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~--~~~------~~~~~v~~~~~s~~----~~~l~~-~~-------   97 (343)
                      ....|+|.|+|+++++....+.|.+++..+++...  .+.      ........|+|+|+    +.+.++ +.       
T Consensus        28 ~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~  107 (454)
T 1cru_A           28 KPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTD  107 (454)
T ss_dssp             SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--
T ss_pred             CceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCc
Confidence            67899999999999888764578888765444321  111      12456789999995    444444 22       


Q ss_pred             -----CCeEEEEEccCC-------ceEE-Eec-ccCCCeEEEEEecCCCEEEEecC
Q psy10867         98 -----ETKLHMWQISSG-------RLLA-TAS-SHYQPITIVKWSADSNFIVTGGE  139 (343)
Q Consensus        98 -----d~~i~v~~~~~~-------~~~~-~~~-~~~~~v~~~~~~~~~~~l~s~~~  139 (343)
                           ...|.-+++..+       +.+. .+. ........|+|.|||.+.++.+.
T Consensus       108 ~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd  163 (454)
T 1cru_A          108 KELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD  163 (454)
T ss_dssp             CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred             cccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence                 235666665432       1111 122 11234689999999997777554

>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A

Probab=97.47  E-value=0.025  Score=45.07  Aligned_cols=213  Identities=10%  Similarity=0.072  Sum_probs=102.3

Q ss_pred             CeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcC----C-----CeEEEEeCCCcccceecc--cCCcceEE
Q psy10867         15 GAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKG----K-----PMIQAWPVNSQEKAQLRL--ICPGRISS   83 (343)
Q Consensus        15 g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~----~-----~~i~iw~~~~~~~~~~~~--~~~~~v~~   83 (343)
                      ..+.++|..+.+-...-.......-.+++.. ++.+++.|..    +     ..+.+||..+.+......  ........
T Consensus        39 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~  117 (308)
T 1zgk_A           39 SYLEAYNPSNGTWLRLADLQVPRSGLAGCVV-GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGV  117 (308)
T ss_dssp             CCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEE
T ss_pred             ceEEEEcCCCCeEeECCCCCcccccceEEEE-CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEE
Confidence            4688999877654332111111022233333 4555554432    1     368889988765443221  11112222


Q ss_pred             EEECCCCCEEEE-ec-----CCeEEEEEccCCceEEE--ecccCCCeEEEEEecCCCEEEEecCC-----CeEEEeecCc
Q psy10867         84 MQASPDAAYIAV-SI-----ETKLHMWQISSGRLLAT--ASSHYQPITIVKWSADSNFIVTGGED-----GTICVWQLSR  150 (343)
Q Consensus        84 ~~~s~~~~~l~~-~~-----d~~i~v~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~s~~~d-----g~i~iwd~~~  150 (343)
                      +.+  ++++++. |.     ...+.+||+.+.+-...  +.........+.+  +++.++.|+.+     ..+.+||+.+
T Consensus       118 ~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~  193 (308)
T 1zgk_A          118 GVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPER  193 (308)
T ss_dssp             EEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTT
T ss_pred             EEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCC
Confidence            222  5666665 32     24688999887754332  1111111222222  66777777654     4578888876


Q ss_pred             cceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCC-----CeEEEEecCCCceEEEeec
Q psy10867        151 LICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHD-----RTCKIFDLCTGEDLLSLIL  225 (343)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d-----~~i~~wd~~~~~~~~~~~~  225 (343)
                      ..-...                    ..+.........+ .. ++  .+++.|+.+     ..+.+||+.+.+-...-..
T Consensus       194 ~~W~~~--------------------~~~p~~r~~~~~~-~~-~~--~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~  249 (308)
T 1zgk_A          194 NEWRMI--------------------TAMNTIRSGAGVC-VL-HN--CIYAAGGYDGQDQLNSVERYDVETETWTFVAPM  249 (308)
T ss_dssp             TEEEEC--------------------CCCSSCCBSCEEE-EE-TT--EEEEECCBCSSSBCCCEEEEETTTTEEEECCCC
T ss_pred             CeEeeC--------------------CCCCCccccceEE-EE-CC--EEEEEeCCCCCCccceEEEEeCCCCcEEECCCC
Confidence            532211                    1111111111222 22 44  677777764     5688999887643221111


Q ss_pred             C--CcEEEEEEcCCCCEEEEEcCC-----CcEEEEEeec
Q psy10867        226 D--TRLTCVAFDGTEDNIYMGTSE-----GVIKSFCLRQ  257 (343)
Q Consensus       226 ~--~~i~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~  257 (343)
                      +  ..-.+++.. +++.++.|+.+     ..+.+||+.+
T Consensus       250 p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~  287 (308)
T 1zgk_A          250 KHRRSALGITVH-QGRIYVLGGYDGHTFLDSVECYDPDT  287 (308)
T ss_dssp             SSCCBSCEEEEE-TTEEEEECCBCSSCBCCEEEEEETTT
T ss_pred             CCCccceEEEEE-CCEEEEEcCcCCCcccceEEEEcCCC
Confidence            1  111122222 45666666643     3456666543

>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*

Probab=97.37  E-value=0.024  Score=42.08  Aligned_cols=147  Identities=7%  Similarity=-0.027  Sum_probs=83.9

Q ss_pred             cceEEEEECCCCCEEEEecCCeEEEEEccCCce------EEEec--ccCCCeEEEEEecCCCEEEEecCCCeEEEeecCc
Q psy10867         79 GRISSMQASPDAAYIAVSIETKLHMWQISSGRL------LATAS--SHYQPITIVKWSADSNFIVTGGEDGTICVWQLSR  150 (343)
Q Consensus        79 ~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~------~~~~~--~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~  150 (343)
                      ..+..++|+|+|.+.++ .+|.++-.+..+...      -..+-  +-.. ..++.|.|++.+.++  .||.|.-++..+
T Consensus        41 ~~~~~laf~P~G~LYaV-~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~-F~a~~fD~~G~LYav--~dG~iyr~~pP~  116 (236)
T 1tl2_A           41 SNFKFLFLSPGGELYGV-LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQ-FQFLFFDPNGYLYAV--SKDKLYKASPPQ  116 (236)
T ss_dssp             TTCSEEEECTTSCEEEE-ETTEEEEESCCCSTTCCHHHHCEEEECSCGGG-CSEEEECTTSCEEEE--ETTEEEEESCCC
T ss_pred             ccceeEEECCCccEEEE-eCCeEEEECCCCCCcccccccccEeccccccc-ceEEEECCCCCEEEe--CCCEEEEeCCCc
Confidence            46779999999998888 788877766544211      11110  1111 468899999987777  559888777543


Q ss_pred             cceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCce------EEEee
Q psy10867        151 LICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGED------LLSLI  224 (343)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~------~~~~~  224 (343)
                      .....-+               ......-..-=..+..+.+.|+|  .+. +.. |+.++-....++..      ...+.
T Consensus       117 ~~~~~Wl---------------~~a~~vg~~gw~~~~~lff~p~G--~Ly-av~-dg~lyr~~~P~~~~~~wl~~~~~~g  177 (236)
T 1tl2_A          117 SDTDNWI---------------ARATEVGSGGWSGFKFLFFHPNG--YLY-AVH-GQQFYKALPPVSNQDNWLARATKIG  177 (236)
T ss_dssp             STTCCHH---------------HHSEEEECSSGGGEEEEEECTTS--CEE-EEE-TTEEEEECCCSSTTCCHHHHCEEEE
T ss_pred             CCCCcee---------------ccccEeccCCCCceEEEEECCCc--eEE-EEe-CCcEEecCCCCCCCcccccccceec
Confidence            2111000               00011111112467899999999  444 444 78765443332221      11111


Q ss_pred             --cCCcEEEEEEcCCCCEEEEEcCCCcE
Q psy10867        225 --LDTRLTCVAFDGTEDNIYMGTSEGVI  250 (343)
Q Consensus       225 --~~~~i~~~~~~~~~~~l~~~~~d~~i  250 (343)
                        .-.....+.|.+++...++.  ++.+
T Consensus       178 ~~g~~~yr~l~f~~~G~l~~v~--~g~~  203 (236)
T 1tl2_A          178 QGGWDTFKFLFFSSVGTLFGVQ--GGKF  203 (236)
T ss_dssp             SSSGGGEEEEEECTTSCEEEEE--TTEE
T ss_pred             cCCcceEEEEEECCCCcEEEEe--CCeE
Confidence              12235557799998887777  6643

>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}

Probab=97.22  E-value=0.054  Score=43.19  Aligned_cols=180  Identities=8%  Similarity=-0.005  Sum_probs=87.2

Q ss_pred             eEEEEEcCCCeEEEEeCCCcccceeccc-CCcceEEEEECCCCCEEEE-ec----C-------CeEEEEEccCCceEEEe
Q psy10867         49 YVLGVEKGKPMIQAWPVNSQEKAQLRLI-CPGRISSMQASPDAAYIAV-SI----E-------TKLHMWQISSGRLLATA  115 (343)
Q Consensus        49 ~~~~~~~~~~~i~iw~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~-~~----d-------~~i~v~~~~~~~~~~~~  115 (343)
                      .+++.|.  ..+.+||..+++....... ............++.+++. |.    +       ..+.+||+.+++-.. +
T Consensus         6 ~l~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~-~   82 (315)
T 4asc_A            6 LIFMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLG-M   82 (315)
T ss_dssp             EEEEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEE-C
T ss_pred             EEEEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEE-C
Confidence            3444444  4699999988775431111 1122333333446666654 42    1       137888988775432 2


Q ss_pred             cccCCCe--EEEEEecCCCEEEEecCC--------CeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccc
Q psy10867        116 SSHYQPI--TIVKWSADSNFIVTGGED--------GTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLP  185 (343)
Q Consensus       116 ~~~~~~v--~~~~~~~~~~~l~s~~~d--------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (343)
                      ..-..+-  .+++.. +++.++.|+.+        ..+.+||+.+.+-..                    +..+......
T Consensus        83 ~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~--------------------~~~~p~~r~~  141 (315)
T 4asc_A           83 PPLPSPRCLFGLGEA-LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGE--------------------SDPLPYVVYG  141 (315)
T ss_dssp             CCBSSCEESCEEEEE-TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEE--------------------CCCCSSCCBS
T ss_pred             CCCCcchhceeEEEE-CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeE--------------------CCCCCCcccc
Confidence            1111111  112222 56777777732        348888887653211                    1111111111


Q ss_pred             eEEEEeecCCCceEEEEeeC-C-----CeEEEEecCCCceEEEeecCC--cEEEEEEcCCCCEEEEEcCCC-----cEEE
Q psy10867        186 VTHVTLSKLGAKSRVASVSH-D-----RTCKIFDLCTGEDLLSLILDT--RLTCVAFDGTEDNIYMGTSEG-----VIKS  252 (343)
Q Consensus       186 v~~~~~~~~~~~~~l~~~~~-d-----~~i~~wd~~~~~~~~~~~~~~--~i~~~~~~~~~~~l~~~~~d~-----~i~i  252 (343)
                      . +++. -++  .+++.|+. +     ..+.+||..+.+-...-..+.  .-.+++.. +++.++.|+.++     .+.+
T Consensus       142 ~-~~~~-~~~--~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~  216 (315)
T 4asc_A          142 H-TVLS-HMD--LVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH-DGRIIVAAGVTDTGLTSSAEV  216 (315)
T ss_dssp             C-EEEE-ETT--EEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEEEEECSSSEEEEEEE
T ss_pred             e-eEEE-ECC--EEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE-CCEEEEEeccCCCCccceEEE
Confidence            1 1222 344  67777766 2     468899987764322111111  11122222 566777776544     4777


Q ss_pred             EEeec
Q psy10867        253 FCLRQ  257 (343)
Q Consensus       253 ~d~~~  257 (343)
                      ||+.+
T Consensus       217 yd~~~  221 (315)
T 4asc_A          217 YSITD  221 (315)
T ss_dssp             EETTT
T ss_pred             EECCC
Confidence            77654

>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}

Probab=97.22  E-value=0.055  Score=43.15  Aligned_cols=132  Identities=11%  Similarity=0.045  Sum_probs=65.6

Q ss_pred             CeEEEEecCCceEEE-EEecCCCCcceEEEEeCCceEEEEEcC-----C------CeEEEEeCCCcccceecccCC--cc
Q psy10867         15 GAISVWEPKGGTLLM-SYKGASVLSPHSMCLLGNDYVLGVEKG-----K------PMIQAWPVNSQEKAQLRLICP--GR   80 (343)
Q Consensus        15 g~i~iwd~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~-----~------~~i~iw~~~~~~~~~~~~~~~--~~   80 (343)
                      ..+.+||..+++-.. .+.......-.+++. .++.+++.|..     .      ..+..||..+.+.........  ..
T Consensus        13 ~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~   91 (315)
T 4asc_A           13 EGAVAYDPAANECYCASLSSQVPKNHVSLVT-KENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCL   91 (315)
T ss_dssp             TEEEEEETTTTEEEEEECCCCSCSSEEEEEC-TTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEES
T ss_pred             CceEEECCCCCeEecCCCCCCCCccceEEEE-ECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhc
Confidence            579999998876433 222221202233333 45544444431     1      127788888766432211111  11


Q ss_pred             eEEEEECCCCCEEEE-ecC--------CeEEEEEccCCceEEE--ecccCCCeEEEEEecCCCEEEEecC-C-----CeE
Q psy10867         81 ISSMQASPDAAYIAV-SIE--------TKLHMWQISSGRLLAT--ASSHYQPITIVKWSADSNFIVTGGE-D-----GTI  143 (343)
Q Consensus        81 v~~~~~s~~~~~l~~-~~d--------~~i~v~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~s~~~-d-----g~i  143 (343)
                      ...+.+  ++++++. |.+        ..+.+||+.+.+-...  +....... +++. .+++.++.|+. +     ..+
T Consensus        92 ~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~  167 (315)
T 4asc_A           92 FGLGEA--LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGH-TVLS-HMDLVYVIGGKGSDRKCLNKM  167 (315)
T ss_dssp             CEEEEE--TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSC-EEEE-ETTEEEEECCBCTTSCBCCCE
T ss_pred             eeEEEE--CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccce-eEEE-ECCEEEEEeCCCCCCcccceE
Confidence            112222  5555554 421        3699999987754332  11111111 2222 36677777775 2     358


Q ss_pred             EEeecCcc
Q psy10867        144 CVWQLSRL  151 (343)
Q Consensus       144 ~iwd~~~~  151 (343)
                      .+||+.+.
T Consensus       168 ~~yd~~~~  175 (315)
T 4asc_A          168 CVYDPKKF  175 (315)
T ss_dssp             EEEETTTT
T ss_pred             EEEeCCCC
Confidence            88888765

>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A

Probab=97.18  E-value=0.13  Score=46.73  Aligned_cols=288  Identities=9%  Similarity=0.060  Sum_probs=151.5

Q ss_pred             eEEEEecCCceEEEEEe----c-CCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceeccc-----CCcceEEEE
Q psy10867         16 AISVWEPKGGTLLMSYK----G-ASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLI-----CPGRISSMQ   85 (343)
Q Consensus        16 ~i~iwd~~~~~~~~~~~----~-~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~-----~~~~v~~~~   85 (343)
                      .|..+|..+++.. .+.    . ... .|.++...+++.+.++..  +-+..++..+++.......     ....|.++.
T Consensus       122 Gl~~~~~~~~~~~-~~~~~~~~l~~~-~i~~i~~d~~g~lWigt~--~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~  197 (758)
T 3ott_A          122 GLYTYQLQSRKLT-SFDTRRNGLPNN-TIYSIIRTKDNQIYVGTY--NGLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLL  197 (758)
T ss_dssp             EEEEEETTTCCEE-EECHHHHCCSCS-CEEEEEECTTCCEEEEET--TEEEEEETTTTEEEEECCCCCTTCSSCCEEEEE
T ss_pred             cceeEeCCCCeEE-EeccCCCCcCCC-eEEEEEEcCCCCEEEEeC--CCHhhCccCCCceEEecCCCccccccceeEEEE
Confidence            4667776655433 231    1 123 678888888887777654  3477788776553322111     123488887


Q ss_pred             ECCCCCEEEEecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCC
Q psy10867         86 ASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSS  165 (343)
Q Consensus        86 ~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~  165 (343)
                      ..+++..|-.+.++.+..++..+++...........|.++...+++.+.+ |+. +-+.+++..+........ .     
T Consensus       198 ~d~~~~~lWigt~~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gT~-~Gl~~~~~~~~~~~~~~~-~-----  269 (758)
T 3ott_A          198 EDTTRQCVWIGTEGYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLA-GTD-NGLYVYHNDTTPLQHIIH-D-----  269 (758)
T ss_dssp             EETTTTEEEEEEEEEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEE-EET-TEEEEECCTTSCCEEECC-C-----
T ss_pred             EECCCCEEEEEECCCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEE-EeC-CceeEEecCCCcEEEEEc-C-----
Confidence            77666543332245688899877654322111234578888777776554 444 457888876643211100 0     


Q ss_pred             CCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee--------cCCcEEEEEEcCC
Q psy10867        166 GKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI--------LDTRLTCVAFDGT  237 (343)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~--------~~~~i~~~~~~~~  237 (343)
                               ......-....|.++....++  . |-.|+..| +.++... . ....+.        ....|.++.-..+
T Consensus       270 ---------~~~~~~l~~~~i~~i~~D~~g--~-lWiGT~~G-l~~~~~~-~-~~~~~~~~~~~~~~~~~~v~~i~~D~~  334 (758)
T 3ott_A          270 ---------SRNIQSLTNNIIWNIFADQEH--N-IWLGTDYG-ISLSRYN-S-ALQFIPISQITGTGDGNQFYSLFRDSK  334 (758)
T ss_dssp             ---------TTCTTSCSCSCEEEEEECTTC--C-EEEEESSS-EEEECCC-C--CEEEEHHHHSCSCCCCBEEEEEECTT
T ss_pred             ---------CCCcCcCCcCeEEEEEEcCCC--C-EEEEeCCc-ccccccC-C-ceeEEecccCCCCCCCceEEEEEEcCC
Confidence                     000000123458888877776  3 44555556 5444322 1 111111        1345888888887


Q ss_pred             CCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeec
Q psy10867        238 EDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTI  317 (343)
Q Consensus       238 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~  317 (343)
                      |.+.+. +.+| +..++....................+  ....|.++.-..+|++.+ |+ ++-|..||..+++.....
T Consensus       335 g~lWiG-t~~G-l~~~~~~~~~~~~~~~~~~~~~~~~l--~~~~v~~i~~d~~g~lWi-gt-~~GL~~~~~~~~~~~~~~  408 (758)
T 3ott_A          335 GFYWFG-GANG-LIRFTDPAGERHDAIWYRMGDKTYPL--SHNRIRHIYEDKEQQLWI-AT-DGSINRYDYATRQFIHYN  408 (758)
T ss_dssp             CCEEEE-ETTE-EEEESCTTSSCCCCEEECTTCSSSCC--SCSCEEEEEECTTSCEEE-EE-TTEEEEEETTTTEEEEEE
T ss_pred             CCEEEe-eCCc-ceeecccccccceeEEeccCCcCCCC--CCCceEEEEECCCCCEEE-Ee-CCcHhhcCcCCCcEEEee
Confidence            775554 4454 55555433111000000000000011  234688888887777544 44 456899998776543321


Q ss_pred             --c-----cCCceEEEEEccCCCeee
Q psy10867        318 --Q-----HKGPVLGAFLGLLPPAIH  336 (343)
Q Consensus       318 --~-----~~~~v~~~~~sp~~~~l~  336 (343)
                        .     ....|.++...++|...+
T Consensus       409 ~~~~~~~~~~~~v~~i~~d~~g~lWi  434 (758)
T 3ott_A          409 IVDNTGTYNTNWTYYIFEDTAGQLWI  434 (758)
T ss_dssp             EECCC--CBSSSEEEEEECTTSEEEE
T ss_pred             cCCCcCCCCCceEEEEEEcCCCCEEE
Confidence              1     124578888777776544

>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A

Probab=96.99  E-value=0.13  Score=43.45  Aligned_cols=60  Identities=13%  Similarity=0.109  Sum_probs=40.6

Q ss_pred             CcceEEEEECCCCCEEEEecCC-eEEEEEccCCceE--EEecc------cCCCeEEEEEecC---CCEEEEe
Q psy10867         78 PGRISSMQASPDAAYIAVSIET-KLHMWQISSGRLL--ATASS------HYQPITIVKWSAD---SNFIVTG  137 (343)
Q Consensus        78 ~~~v~~~~~s~~~~~l~~~~d~-~i~v~~~~~~~~~--~~~~~------~~~~v~~~~~~~~---~~~l~s~  137 (343)
                      -.....|+|.|+|+++++...+ .|++++..++...  ..+..      ..+....|+|+|+   +..|+..
T Consensus        26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~   97 (454)
T 1cru_A           26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYIS   97 (454)
T ss_dssp             CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEE
T ss_pred             CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEE
Confidence            3456799999999999997765 7888886656432  22221      2456789999995   4444443

>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}

Probab=96.97  E-value=0.11  Score=42.26  Aligned_cols=91  Identities=14%  Similarity=0.061  Sum_probs=44.4

Q ss_pred             CceEEEE-EcCCCeEEEEeCCC--ccccee--cc-cCCcceEEEEECCCCCEEEE-ec-C---------CeEEEEEccCC
Q psy10867         47 NDYVLGV-EKGKPMIQAWPVNS--QEKAQL--RL-ICPGRISSMQASPDAAYIAV-SI-E---------TKLHMWQISSG  109 (343)
Q Consensus        47 ~~~~~~~-~~~~~~i~iw~~~~--~~~~~~--~~-~~~~~v~~~~~s~~~~~l~~-~~-d---------~~i~v~~~~~~  109 (343)
                      ++++++. |.....+.+||..+  .+....  +. ........+.+  ++++++. |. +         +.+.+||+.+.
T Consensus        19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~   96 (357)
T 2uvk_A           19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI--DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN   96 (357)
T ss_dssp             TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE--TTEEEEECCEEECTTSCEEECCCEEEEETTTT
T ss_pred             CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE--CCEEEEEcCCCCCCCccceeeccEEEEeCCCC
Confidence            4555444 44446788999864  322211  11 11111222222  5665554 43 1         36899998877


Q ss_pred             ceEEEeccc-CCC-eEEEEEecCCCEEEEecCC
Q psy10867        110 RLLATASSH-YQP-ITIVKWSADSNFIVTGGED  140 (343)
Q Consensus       110 ~~~~~~~~~-~~~-v~~~~~~~~~~~l~s~~~d  140 (343)
                      +-...-... ... -.+++. .+++.++.|+.+
T Consensus        97 ~W~~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~  128 (357)
T 2uvk_A           97 SWVKLMSHAPMGMAGHVTFV-HNGKAYVTGGVN  128 (357)
T ss_dssp             EEEECSCCCSSCCSSEEEEE-ETTEEEEEECCC
T ss_pred             cEEECCCCCCcccccceEEE-ECCEEEEEeCcC
Confidence            543322111 111 122222 477788888764

>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A

Probab=96.95  E-value=0.15  Score=43.54  Aligned_cols=249  Identities=10%  Similarity=0.045  Sum_probs=136.7

Q ss_pred             EEEecCCCCeEEEEecCCceEEEEEecCCCC------------------------cce--EEEEe---CCceEEEEEc-C
Q psy10867          7 VAFSYDGSGAISVWEPKGGTLLMSYKGASVL------------------------SPH--SMCLL---GNDYVLGVEK-G   56 (343)
Q Consensus         7 ~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~------------------------~v~--~~~~~---~~~~~~~~~~-~   56 (343)
                      ..+|++..|.|+|+-+.+++.+..+......                        ...  .+.+.   -||+++..-+ .
T Consensus        72 ~f~SgG~sG~v~v~G~PSmR~l~~IpVF~~~~~~G~G~t~esk~il~~~~~~~~gD~HHp~~S~tdg~yDGrylfiNdka  151 (638)
T 3sbq_A           72 GFWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGLTNESRHIMGDSAKFLNGDCHHPHISMTDGKYDGKYLFINDKA  151 (638)
T ss_dssp             EEEECGGGCCEEEEEETTTEEEEEECSSSCCTTTCTTTBHHHHHHHGGGGGCCCCCCCCCEEEEETTEEEEEEEEEEETT
T ss_pred             EEeecCcCceEEEEecCCcceEEEeecccCCCCcccCCchhHHHHHhcCCCccCCCcCCCcccccCCeeeeEEEEEecCC
Confidence            3456666899999999999998876432100                        111  23333   2577777765 4


Q ss_pred             CCeEEEEeCCCcccceecc-cCCcceEEEEEC--CCCCEEEEe--------cCCe-E--------EE---EEccCCceEE
Q psy10867         57 KPMIQAWPVNSQEKAQLRL-ICPGRISSMQAS--PDAAYIAVS--------IETK-L--------HM---WQISSGRLLA  113 (343)
Q Consensus        57 ~~~i~iw~~~~~~~~~~~~-~~~~~v~~~~~s--~~~~~l~~~--------~d~~-i--------~v---~~~~~~~~~~  113 (343)
                      +..|-..+++..++.++.. .....+..++|-  |+..++.++        .||. +        .+   .|..+.+...
T Consensus       152 n~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~~~~~~~~~y~~f~~iD~~tm~v~~  231 (638)
T 3sbq_A          152 NSRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTKYVFANAEFIIPHPNDGKVFDLQDENSYTMYNAIDAETMEMAF  231 (638)
T ss_dssp             TTEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCTTSTTEEEEEEEEETTTCSEEE
T ss_pred             CcceEEEECCcEeeceeEeCCCCcCcccccccccCCccEEEecceeeccCCCCCcccccCChhhceEEEEEcCCccEEEE
Confidence            5678788888877765443 556678888886  677777763        2222 1        11   1222222221


Q ss_pred             EecccCCCeEEEEEecCCCEEEEecCCC---------------eEEEeecCccceeeeeecCCCCCC--CCc-cccc---
Q psy10867        114 TASSHYQPITIVKWSADSNFIVTGGEDG---------------TICVWQLSRLICKQTVAFGIPGSS--GKG-VTGL---  172 (343)
Q Consensus       114 ~~~~~~~~v~~~~~~~~~~~l~s~~~dg---------------~i~iwd~~~~~~~~~~~~~~~~~~--~~~-~~~~---  172 (343)
                      .+.- .+....+...+++.+.++.+.+.               .+.++++...+..-.- .......  +-. +...   
T Consensus       232 Qv~v-~gnld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~-G~~~~~~g~gv~ViD~~~~~  309 (638)
T 3sbq_A          232 QVIV-DGNLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKA-GDFITLGDSKTPVLDGRKKD  309 (638)
T ss_dssp             EEEE-SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHT-TCCBCCTTCCCCEEECSCBT
T ss_pred             EEEc-CCChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhc-CCeEEECCCCeeEEcccccc
Confidence            1111 12223344566777777655432               2455554321110000 0000000  000 0000   


Q ss_pred             --cceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCce-------------EEEeecCCcEEEEEEcCC
Q psy10867        173 --TEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGED-------------LLSLILDTRLTCVAFDGT  237 (343)
Q Consensus       173 --~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~-------------~~~~~~~~~i~~~~~~~~  237 (343)
                        ...+..+-.-......+.++|+|. ..++++-.+.++.++|++....             .......-.....+|.++
T Consensus       310 ~~~~~~~~~iP~pksPHGv~vsPDGk-yi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~  388 (638)
T 3sbq_A          310 GKDSKFTRYVPVPKNPHGCNTSSDGK-YFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGR  388 (638)
T ss_dssp             TBCCSSEEEEEESSSCCCEEECTTSC-EEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSS
T ss_pred             ccCCceEEEEeCCCCCcceeeCCCCC-EEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCC
Confidence              011111122234456788999994 4455556689999999874211             333345667889999999


Q ss_pred             CCEEEEEcCCCcEEEEEeecc
Q psy10867        238 EDNIYMGTSEGVIKSFCLRQV  258 (343)
Q Consensus       238 ~~~l~~~~~d~~i~i~d~~~~  258 (343)
                      |....+-.-|.+|..|++...
T Consensus       389 G~aYTtlfidSqvvkWni~~a  409 (638)
T 3sbq_A          389 GNAYTTLFIDSQVVKWNMEEA  409 (638)
T ss_dssp             SEEEEEETTTTEEEEEEHHHH
T ss_pred             CceEeeeeecceEEEEeccHH
Confidence            955555668999999999764

>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}

Probab=96.91  E-value=0.12  Score=41.89  Aligned_cols=49  Identities=10%  Similarity=-0.014  Sum_probs=26.1

Q ss_pred             CeEEEEEccCCceEEE--ecccCCCeEEEEEecCCCEEEEecC------CCeEEEeec
Q psy10867         99 TKLHMWQISSGRLLAT--ASSHYQPITIVKWSADSNFIVTGGE------DGTICVWQL  148 (343)
Q Consensus        99 ~~i~v~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~s~~~------dg~i~iwd~  148 (343)
                      ..+.+||+.+.+-...  +......-.+++.. +++.++.|+.      ...+..||+
T Consensus       168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~  224 (357)
T 2uvk_A          168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVNK-GDKTWLINGEAKPGLRTDAVFELDF  224 (357)
T ss_dssp             CEEEEEETTTTEEEEEEECSSCCCBSCEEEEE-TTEEEEECCEEETTEECCCEEEEEC
T ss_pred             ccEEEEeCCCCcEEECCCCCCCCcccccEEEE-CCEEEEEeeecCCCcccCceEEEEe
Confidence            5799999987754332  22111111233332 5667777764      234666776

>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A

Probab=96.83  E-value=0.27  Score=44.64  Aligned_cols=265  Identities=13%  Similarity=0.078  Sum_probs=141.2

Q ss_pred             cceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEEecCCeEEEEEccCCceEEEec-
Q psy10867         38 SPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATAS-  116 (343)
Q Consensus        38 ~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~-  116 (343)
                      .|.++....++.+.++...  -+..||..+.+...........|.++.. .++.+.+++.+ .+..|+..+++...... 
T Consensus        64 ~i~~i~~d~~g~lWigT~~--Gl~~yd~~~~~f~~~~~~~~~~i~~i~~-~~g~lWigt~~-Gl~~~~~~~~~~~~~~~~  139 (758)
T 3ott_A           64 RIYCGVIIDNTYLYMGTDN--GILVYNYRADRYEQPETDFPTDVRTMAL-QGDTLWLGALN-GLYTYQLQSRKLTSFDTR  139 (758)
T ss_dssp             CEEEEEEETTTEEEEEETT--EEEEEETTTTEECCCSCCCCSCEEEEEE-ETTEEEEEETT-EEEEEETTTCCEEEECHH
T ss_pred             eEEEEEEcCCCcEEEEeCC--CeEEEeCCCCEEECcccCCCceEEEEEe-cCCcEEEEcCC-cceeEeCCCCeEEEeccC
Confidence            6888888888877766543  4788998776543211112335777654 46665555544 78889987765433211 


Q ss_pred             ---ccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeec
Q psy10867        117 ---SHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSK  193 (343)
Q Consensus       117 ---~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  193 (343)
                         .....|.++....++.+.+ |+.+ -+..++..+..... +..               + .........|.++...+
T Consensus       140 ~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~~-~~~---------------~-~~~~~~~~~i~~i~~d~  200 (758)
T 3ott_A          140 RNGLPNNTIYSIIRTKDNQIYV-GTYN-GLCRYIPSNGKFEG-IPL---------------P-VHSSQSNLFVNSLLEDT  200 (758)
T ss_dssp             HHCCSCSCEEEEEECTTCCEEE-EETT-EEEEEETTTTEEEE-ECC---------------C-CCTTCSSCCEEEEEEET
T ss_pred             CCCcCCCeEEEEEEcCCCCEEE-EeCC-CHhhCccCCCceEE-ecC---------------C-CccccccceeEEEEEEC
Confidence               1234688888877777555 4444 47778876643211 100               0 00000123477887776


Q ss_pred             CCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCC
Q psy10867        194 LGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSN  272 (343)
Q Consensus       194 ~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~  272 (343)
                      ++  ..|..|+. +-+..+|..+++...... ....|.++...+++.+.+ |+.+ -+.+++....... .+... ....
T Consensus       201 ~~--~~lWigt~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gT~~-Gl~~~~~~~~~~~-~~~~~-~~~~  273 (758)
T 3ott_A          201 TR--QCVWIGTE-GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLA-GTDN-GLYVYHNDTTPLQ-HIIHD-SRNI  273 (758)
T ss_dssp             TT--TEEEEEEE-EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEE-EETT-EEEEECCTTSCCE-EECCC-TTCT
T ss_pred             CC--CEEEEEEC-CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEE-EeCC-ceeEEecCCCcEE-EEEcC-CCCc
Confidence            65  44444554 458888877665332211 234588888888776555 4444 5777776543211 00000 0000


Q ss_pred             CccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc------cCCceEEEEEccCCCeee
Q psy10867        273 PDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ------HKGPVLGAFLGLLPPAIH  336 (343)
Q Consensus       273 ~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~------~~~~v~~~~~sp~~~~l~  336 (343)
                      ..+  ....|.++....+|.+. .|+..| +.++............      ....|.++.-..+|..-+
T Consensus       274 ~~l--~~~~i~~i~~D~~g~lW-iGT~~G-l~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~D~~g~lWi  339 (758)
T 3ott_A          274 QSL--TNNIIWNIFADQEHNIW-LGTDYG-ISLSRYNSALQFIPISQITGTGDGNQFYSLFRDSKGFYWF  339 (758)
T ss_dssp             TSC--SCSCEEEEEECTTCCEE-EEESSS-EEEECCCC-CEEEEHHHHSCSCCCCBEEEEEECTTCCEEE
T ss_pred             CcC--CcCeEEEEEEcCCCCEE-EEeCCc-ccccccCCceeEEecccCCCCCCCceEEEEEEcCCCCEEE
Confidence            111  23568899888777644 444556 5544322111111110      123577777666665443

>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}

Probab=96.83  E-value=0.13  Score=40.78  Aligned_cols=223  Identities=10%  Similarity=0.040  Sum_probs=113.9

Q ss_pred             CCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEEe-c--------------CCeEEEEEccCCceEEEecccCC
Q psy10867         56 GKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVS-I--------------ETKLHMWQISSGRLLATASSHYQ  120 (343)
Q Consensus        56 ~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~--------------d~~i~v~~~~~~~~~~~~~~~~~  120 (343)
                      +++.|...+.+.....+...   ..  +--+++++.+|.-+ .              ...|+..++..++......   .
T Consensus        35 d~~~ly~~~~dg~~~~~l~~---~~--~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~~---~  106 (302)
T 3s25_A           35 DNGRLYAMNIDGSNIHKLSN---DT--AMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLDP---D  106 (302)
T ss_dssp             GTTEEEEEETTSCSCEEEEE---EE--EEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEEC---S
T ss_pred             CCceEEEEcCCCCCCEEccC---Cc--eeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEeec---C
Confidence            34667666766554333321   12  23457888888742 2              2467888877665433222   1


Q ss_pred             CeEEEEEecCCCEEEEec--C--CCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCC
Q psy10867        121 PITIVKWSADSNFIVTGG--E--DGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGA  196 (343)
Q Consensus       121 ~v~~~~~~~~~~~l~s~~--~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  196 (343)
                      .  +..|+++++.|+-..  .  +..|...++....                       ...+..+..    ..++++++
T Consensus       107 ~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~-----------------------~~~lt~~~~----~~~~~~g~  157 (302)
T 3s25_A          107 P--CIYASLIGNYIYYLHYDTQTATSLYRIRIDGEE-----------------------KKKIKNHYL----FTCNTSDR  157 (302)
T ss_dssp             C--EEEEEEETTEEEEEEESSSSCEEEEEEETTSCC-----------------------CEEEESSCC----CCSEEETT
T ss_pred             C--ccEEEEeCCEEEEEeecCCCCceEEEEECCCCC-----------------------eEEEeCCCc----eEeeEECC
Confidence            1  236778888887665  2  3455555555421                       111222222    35677774


Q ss_pred             ceEEEEeeCCCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcCCC--cEEEEEeecccccccccccCCCCCCc
Q psy10867        197 KSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEG--VIKSFCLRQVPRTRDHHIQDSTSNPD  274 (343)
Q Consensus       197 ~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~--~i~i~d~~~~~~~~~~~~~~~~~~~~  274 (343)
                       .+..+......|..-++..+.....+.  .... ..+.|++.+|+-...++  .|..-++......            .
T Consensus       158 -~iy~t~~g~~~Iy~~~l~g~~~~~l~~--~~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~~------------~  221 (302)
T 3s25_A          158 -YFYYNNPKNGQLYRYDTASQSEALFYD--CNCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNPNPV------------V  221 (302)
T ss_dssp             -EEEEECTTTCCEEEEETTTTEEEEEEC--SCEE-EEEEEETTEEEEEEGGGTTEEEEECSSSCCCE------------E
T ss_pred             -EEEEEeCCCceEEEEECCCCCEEEEeC--CCcc-ceeeecCCEEEEEEcCCCcEEEEEECCCCCeE------------E
Confidence             344454446788888876655433322  2322 24569999888765433  4555555443221            1


Q ss_pred             cccccCcEEEEEEccCCCEEEEEeC--CCcEEEEecccceeeeecccCCceEEEEEccCCCeeeecc
Q psy10867        275 FIGHEKQVTSLSCSITGITLLSSSA--DETLKIWHTISRQCLRTIQHKGPVLGAFLGLLPPAIHDYD  339 (343)
Q Consensus       275 ~~~~~~~v~~~~~s~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~  339 (343)
                      +.  ...+  ..|+|++++|.-++.  .+.|..-++. |...+.+... .+.  .+++.+.+|+-..
T Consensus       222 Lt--~~~~--~~~~~~g~~Iy~~~~~~~~~i~~~~~D-G~~r~~l~~~-~~~--~i~i~~d~Iy~td  280 (302)
T 3s25_A          222 LT--EANI--EHYNVYGSLIFYQRGGDNPALCVVKND-GTGFKELAKG-EFC--NINVTSQYVYFTD  280 (302)
T ss_dssp             CS--CSCE--EEEEEETTEEEEEECSSSCEEEEEETT-SCCCEEEEES-CEE--EEEECSSEEEEEE
T ss_pred             Ee--CCCc--ceEEECCCEEEEEECCCCcEEEEEECC-CCccEEeeCC-ccc--eEEEeCCEEEEEE
Confidence            11  1222  337788887775532  3455555553 3333333211 222  3444555555443

>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}

Probab=96.81  E-value=0.13  Score=40.71  Aligned_cols=194  Identities=9%  Similarity=0.072  Sum_probs=101.1

Q ss_pred             CCCCEEEEe---cCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCC--------------CeEEEeecCc
Q psy10867         88 PDAAYIAVS---IETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGED--------------GTICVWQLSR  150 (343)
Q Consensus        88 ~~~~~l~~~---~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d--------------g~i~iwd~~~  150 (343)
                      +++.++.-+   .++.|+..+.+... ...+...    .+--+++++++|+-....              ..|+..++..
T Consensus        23 ~~g~~iy~~n~~d~~~ly~~~~dg~~-~~~l~~~----~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg   97 (302)
T 3s25_A           23 ESDGEVFFSNTNDNGRLYAMNIDGSN-IHKLSND----TAMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNG   97 (302)
T ss_dssp             EETTEEEEEEGGGTTEEEEEETTSCS-CEEEEEE----EEEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTS
T ss_pred             EeCCEEEEEeCCCCceEEEEcCCCCC-CEEccCC----ceeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCC
Confidence            456666542   35677777764443 3333321    133457888888776542              3566666665


Q ss_pred             cceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEee----CCCeEEEEecCCCceEEEeecC
Q psy10867        151 LICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVS----HDRTCKIFDLCTGEDLLSLILD  226 (343)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~----~d~~i~~wd~~~~~~~~~~~~~  226 (343)
                      ...                       ..+..  ..  ...+++++  +.|+-..    ....|...++.... ...+...
T Consensus        98 ~~~-----------------------~~l~~--~~--~~~~s~~g--~~Iy~~~~~~~~~~~Iy~~~~dGs~-~~~lt~~  147 (302)
T 3s25_A           98 HGS-----------------------TVLDP--DP--CIYASLIG--NYIYYLHYDTQTATSLYRIRIDGEE-KKKIKNH  147 (302)
T ss_dssp             CCC-----------------------EEEEC--SC--EEEEEEET--TEEEEEEESSSSCEEEEEEETTSCC-CEEEESS
T ss_pred             Ccc-----------------------eEeec--CC--ccEEEEeC--CEEEEEeecCCCCceEEEEECCCCC-eEEEeCC
Confidence            421                       11111  11  23567777  4555443    34566666765433 3333322


Q ss_pred             CcEEEEEEcCCCCEEEEEcC-CCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCC--CcE
Q psy10867        227 TRLTCVAFDGTEDNIYMGTS-EGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSAD--ETL  303 (343)
Q Consensus       227 ~~i~~~~~~~~~~~l~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d--g~i  303 (343)
                      ..   ..++|+++.|+-.+. ...|+..++.......         +  +.   +... ..++|++.+|+-...+  ..|
T Consensus       148 ~~---~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~---------l--~~---~~~~-~~~~P~g~~iy~t~~~~~~~I  209 (302)
T 3s25_A          148 YL---FTCNTSDRYFYYNNPKNGQLYRYDTASQSEAL---------F--YD---CNCY-KPVVLDDTNVYYMDVNRDNAI  209 (302)
T ss_dssp             CC---CCSEEETTEEEEECTTTCCEEEEETTTTEEEE---------E--EC---SCEE-EEEEEETTEEEEEEGGGTTEE
T ss_pred             Cc---eEeeEECCEEEEEeCCCceEEEEECCCCCEEE---------E--eC---CCcc-ceeeecCCEEEEEEcCCCcEE
Confidence            11   456788888886654 5677777765533211         1  11   1222 2356888888765543  345


Q ss_pred             EEEecccceeeeecccCCceEEEEEccCCCeeeec
Q psy10867        304 KIWHTISRQCLRTIQHKGPVLGAFLGLLPPAIHDY  338 (343)
Q Consensus       304 ~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~  338 (343)
                      ..-++.... ...+.. ..+  ..|+|++.+|+-+
T Consensus       210 ~~~~ldG~~-~~~Lt~-~~~--~~~~~~g~~Iy~~  240 (302)
T 3s25_A          210 VHVNINNPN-PVVLTE-ANI--EHYNVYGSLIFYQ  240 (302)
T ss_dssp             EEECSSSCC-CEECSC-SCE--EEEEEETTEEEEE
T ss_pred             EEEECCCCC-eEEEeC-CCc--ceEEECCCEEEEE
Confidence            555654433 333331 223  3477888887654

>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}

Probab=96.55  E-value=0.21  Score=39.75  Aligned_cols=140  Identities=9%  Similarity=0.026  Sum_probs=68.4

Q ss_pred             EEEecCCCCeEEEEecCCceEEE-EEecCCCCcceEEEEeCCceEEEEEcC----CC-------eEEEEeCCCcccceec
Q psy10867          7 VAFSYDGSGAISVWEPKGGTLLM-SYKGASVLSPHSMCLLGNDYVLGVEKG----KP-------MIQAWPVNSQEKAQLR   74 (343)
Q Consensus         7 ~~~s~~~dg~i~iwd~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~----~~-------~i~iw~~~~~~~~~~~   74 (343)
                      .++.-++. .+..||..+.+-.. .+.......-.+++ ..++.+++.|..    ++       .+..||..+.+.....
T Consensus        17 ~i~~~GG~-~~~~yd~~~~~W~~~~~~~~~~r~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~   94 (318)
T 2woz_A           17 LILLVNDT-AAVAYDPMENECYLTALAEQIPRNHSSIV-TQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLP   94 (318)
T ss_dssp             EEEEECSS-EEEEEETTTTEEEEEEECTTSCSSEEEEE-CSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECS
T ss_pred             hhhhcccc-ceEEECCCCCceecccCCccCCccceEEE-EECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECC
Confidence            34444443 48899998876544 22221210222333 345655555541    11       2778888776544321


Q ss_pred             c--cCCcceEEEEECCCCCEEEE-ecC-------CeEEEEEccCCceEEE--ecccCCCeEEEEEecCCCEEEEecC---
Q psy10867         75 L--ICPGRISSMQASPDAAYIAV-SIE-------TKLHMWQISSGRLLAT--ASSHYQPITIVKWSADSNFIVTGGE---  139 (343)
Q Consensus        75 ~--~~~~~v~~~~~s~~~~~l~~-~~d-------~~i~v~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~s~~~---  139 (343)
                      .  ........+.+  ++++++. |.+       ..+.+||+.+.+-...  +......- +++. .+++.++.|+.   
T Consensus        95 ~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~~~  170 (318)
T 2woz_A           95 PLPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGH-NVIS-HNGMIYCLGGKTDD  170 (318)
T ss_dssp             CBSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESC-EEEE-ETTEEEEECCEESS
T ss_pred             CCCccccccceEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCccccc-EEEE-ECCEEEEEcCCCCC
Confidence            1  11111222222  5555554 432       3588899887754332  11111111 1222 36777777764   


Q ss_pred             ---CCeEEEeecCccc
Q psy10867        140 ---DGTICVWQLSRLI  152 (343)
Q Consensus       140 ---dg~i~iwd~~~~~  152 (343)
                         -..+.+||+.+..
T Consensus       171 ~~~~~~~~~yd~~~~~  186 (318)
T 2woz_A          171 KKCTNRVFIYNPKKGD  186 (318)
T ss_dssp             SCBCCCEEEEETTTTE
T ss_pred             CCccceEEEEcCCCCE
Confidence               2358888887753

>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}

Probab=96.54  E-value=0.22  Score=39.70  Aligned_cols=225  Identities=12%  Similarity=0.066  Sum_probs=106.0

Q ss_pred             eEEEEEcCCCeEEEEeCCCcccceeccc-CCcceEEEEECCCCCEEEE-ec----CC-------eEEEEEccCCceEEE-
Q psy10867         49 YVLGVEKGKPMIQAWPVNSQEKAQLRLI-CPGRISSMQASPDAAYIAV-SI----ET-------KLHMWQISSGRLLAT-  114 (343)
Q Consensus        49 ~~~~~~~~~~~i~iw~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~-~~----d~-------~i~v~~~~~~~~~~~-  114 (343)
                      .+++.|..  .+..||..+.+....... ............++.+++. |.    ++       .+.+||..+.+-... 
T Consensus        17 ~i~~~GG~--~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~   94 (318)
T 2woz_A           17 LILLVNDT--AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLP   94 (318)
T ss_dssp             EEEEECSS--EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECS
T ss_pred             hhhhcccc--ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECC
Confidence            45555554  488999988765432111 1122222233446666664 42    11       277888877654332 


Q ss_pred             -ecccCCCeEEEEEecCCCEEEEecCC-------CeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccce
Q psy10867        115 -ASSHYQPITIVKWSADSNFIVTGGED-------GTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPV  186 (343)
Q Consensus       115 -~~~~~~~v~~~~~~~~~~~l~s~~~d-------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  186 (343)
                       +.........+.+  +++.++.|+.+       ..+.+||+.+.+-...-.                .......|    
T Consensus        95 ~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~----------------~p~~r~~~----  152 (318)
T 2woz_A           95 PLPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKN----------------LPIKVYGH----  152 (318)
T ss_dssp             CBSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECC----------------CSSCEESC----
T ss_pred             CCCccccccceEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCC----------------CCCccccc----
Confidence             1111111222222  56777777653       247778877653221100                00001112    


Q ss_pred             EEEEeecCCCceEEEEeeC------CCeEEEEecCCCceEEEeecC--CcEEEEEEcCCCCEEEEEcCCC-----cEEEE
Q psy10867        187 THVTLSKLGAKSRVASVSH------DRTCKIFDLCTGEDLLSLILD--TRLTCVAFDGTEDNIYMGTSEG-----VIKSF  253 (343)
Q Consensus       187 ~~~~~~~~~~~~~l~~~~~------d~~i~~wd~~~~~~~~~~~~~--~~i~~~~~~~~~~~l~~~~~d~-----~i~i~  253 (343)
                       +++. .++  .+++.|+.      -..+.+||+.+.+-...-..+  ..-.+++.. +++.++.|+.++     .+.+|
T Consensus       153 -~~~~-~~~--~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~y  227 (318)
T 2woz_A          153 -NVIS-HNG--MIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIH-KGKIVIAGGVTEDGLSASVEAF  227 (318)
T ss_dssp             -EEEE-ETT--EEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEEEEEETTEEEEEEEEE
T ss_pred             -EEEE-ECC--EEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEE-CCEEEEEcCcCCCCccceEEEE
Confidence             1222 344  66777764      245889998876533221111  111122222 466666665432     46677


Q ss_pred             EeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCC--------------CcEEEEeccccee
Q psy10867        254 CLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSAD--------------ETLKIWHTISRQC  313 (343)
Q Consensus       254 d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d--------------g~i~iwd~~~~~~  313 (343)
                      |+.+..=..         +..+.........+.  .++++++.|+.+              ..+.+||+.+.+-
T Consensus       228 d~~~~~W~~---------~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W  290 (318)
T 2woz_A          228 DLKTNKWEV---------MTEFPQERSSISLVS--LAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEW  290 (318)
T ss_dssp             ETTTCCEEE---------CCCCSSCCBSCEEEE--ETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEE
T ss_pred             ECCCCeEEE---------CCCCCCcccceEEEE--ECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEe
Confidence            765432110         111111111112222  356777777654              3578889877643

>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*

Probab=95.93  E-value=0.88  Score=40.83  Aligned_cols=137  Identities=11%  Similarity=0.107  Sum_probs=73.0

Q ss_pred             CeEEEEecCCceEEEEE-e-----cCCCCcceEEEEeC-CceEEEEEcCC------CeEEEEeCCCcccceecc--cCCc
Q psy10867         15 GAISVWEPKGGTLLMSY-K-----GASVLSPHSMCLLG-NDYVLGVEKGK------PMIQAWPVNSQEKAQLRL--ICPG   79 (343)
Q Consensus        15 g~i~iwd~~~~~~~~~~-~-----~~~~~~v~~~~~~~-~~~~~~~~~~~------~~i~iw~~~~~~~~~~~~--~~~~   79 (343)
                      ..+.+||..+++-...- .     ......-.+++..+ ++++++.|+.+      ..+.+||..+.+....-.  ....
T Consensus       412 ~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~  491 (695)
T 2zwa_A          412 NEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRF  491 (695)
T ss_dssp             CCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCB
T ss_pred             CcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcc
Confidence            45788888776543322 1     11111234455554 66666665422      357889988765443211  1111


Q ss_pred             ceEEEEECCCCCEEEE-ecCC--eEEEEEccCCceEEEe-----cccCCCeEEEEEecC-CCEEEEecC--C-----CeE
Q psy10867         80 RISSMQASPDAAYIAV-SIET--KLHMWQISSGRLLATA-----SSHYQPITIVKWSAD-SNFIVTGGE--D-----GTI  143 (343)
Q Consensus        80 ~v~~~~~s~~~~~l~~-~~d~--~i~v~~~~~~~~~~~~-----~~~~~~v~~~~~~~~-~~~l~s~~~--d-----g~i  143 (343)
                      . .+++...++++++. |.++  .+.+||+.+.+-...-     ........++.+..+ ++.++.|+.  +     ..+
T Consensus       492 ~-h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v  570 (695)
T 2zwa_A          492 R-HSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKA  570 (695)
T ss_dssp             S-CEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEE
T ss_pred             c-ceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcE
Confidence            2 22333236776665 4332  7999999887543322     111222233555554 667777765  2     458


Q ss_pred             EEeecCccc
Q psy10867        144 CVWQLSRLI  152 (343)
Q Consensus       144 ~iwd~~~~~  152 (343)
                      .+||+.+..
T Consensus       571 ~~yd~~~~~  579 (695)
T 2zwa_A          571 IIFKYDAEN  579 (695)
T ss_dssp             EEEEECTTC
T ss_pred             EEEEccCCc
Confidence            888988764

>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B

Probab=95.92  E-value=0.44  Score=37.26  Aligned_cols=205  Identities=11%  Similarity=0.107  Sum_probs=106.2

Q ss_pred             CCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEE
Q psy10867         14 SGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYI   93 (343)
Q Consensus        14 dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l   93 (343)
                      ||.|+.|-....-.+..-..... .|..++...+-.++.  . ||.+..|-......+-....-...|..++...+ ..+
T Consensus        41 ~G~v~~wG~n~~Gqlg~p~~~~~-~i~~ia~G~~hs~~l--~-~G~v~~wG~n~~Gqlg~P~~~~~~v~~ia~G~~-hs~  115 (282)
T 3qhy_B           41 GGKVLGWGANLNGQLTMPAATQS-GVDAIAAGNYHSLAL--K-DGEVIAWGGNEDGQTTVPAEARSGVDAIAAGAW-ASY  115 (282)
T ss_dssp             TTEEEEEECCSSSTTSCCGGGGS-CCCEEEECSSEEEEE--E-TTEEEEEECCTTSTTCCCGGGSSSEEEEEEETT-EEE
T ss_pred             CCEEEEEeCCCCCCCCCCccCCC-CEEEEEeCCCEEEEE--E-CCEEEEeeCCCCCCCCCCcccCCCeEEEECcCC-EEE
Confidence            78899997543211111111122 566776654434433  3 589999976543332222222346888876643 344


Q ss_pred             EEecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCcccccc
Q psy10867         94 AVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLT  173 (343)
Q Consensus        94 ~~~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (343)
                      +.. +|.|+.|-......+.........|..++...+.. ++. . ||.|..|-.........                 
T Consensus       116 al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~~~-~~l-~-~G~v~~wG~n~~gqlg~-----------------  174 (282)
T 3qhy_B          116 ALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVYTA-LAV-K-NGGVIAWGDNYFGQTTV-----------------  174 (282)
T ss_dssp             EEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSEE-EEE-E-TTEEEEEECCTTSTTSC-----------------
T ss_pred             EEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccCEE-EEE-E-CCEEEEecCCCCCCCCC-----------------
Confidence            446 99999998654322111112234577776643332 332 3 69999997654321110                 


Q ss_pred             ceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCC-ceEEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEE
Q psy10867        174 EPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTG-EDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKS  252 (343)
Q Consensus       174 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~-~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i  252 (343)
                       +    ......|..++.....   .++.  .||.++.|=.... +.-........|..++.-... .++..  ||.|+.
T Consensus       175 -p----~~~~~~v~~i~~G~~h---s~al--~~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~h-~~al~--~g~v~~  241 (282)
T 3qhy_B          175 -P----AEAQSGVDDVAGGIFH---SLAL--KDGKVIAWGDNRYKQTTVPTEALSGVSAIASGEWY-SLALK--NGKVIA  241 (282)
T ss_dssp             -C----GGGGSSEEEEEECSSE---EEEE--ETTEEEEEECCTTSTTCCCGGGGSSCCEEEECSSC-EEEEE--TTEEEE
T ss_pred             -c----eecCCCeEEEEecCCE---EEEE--ECCeEEEEECCCCCCCCCCcccCCCceEEEcCCCE-EEEEE--CCEEEE
Confidence             1    0113456667665543   4444  5999999964432 211111122346666654332 33333  899998


Q ss_pred             EEeec
Q psy10867        253 FCLRQ  257 (343)
Q Consensus       253 ~d~~~  257 (343)
                      |=...
T Consensus       242 wG~n~  246 (282)
T 3qhy_B          242 WGSSR  246 (282)
T ss_dssp             ESTTC
T ss_pred             ecCCC
Confidence            85443

>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*

Probab=95.82  E-value=0.92  Score=40.71  Aligned_cols=198  Identities=6%  Similarity=0.011  Sum_probs=98.0

Q ss_pred             CCCCEEEE-ecC----CeEEEEEccCCceEEEe-c-----ccC-CCeEEEEEec-CCCEEEEecCCC------eEEEeec
Q psy10867         88 PDAAYIAV-SIE----TKLHMWQISSGRLLATA-S-----SHY-QPITIVKWSA-DSNFIVTGGEDG------TICVWQL  148 (343)
Q Consensus        88 ~~~~~l~~-~~d----~~i~v~~~~~~~~~~~~-~-----~~~-~~v~~~~~~~-~~~~l~s~~~dg------~i~iwd~  148 (343)
                      .++.+++. |.+    +.+.+||+.+++-...- .     ... ..-.+++..+ +++.++.|+.++      .+.+||+
T Consensus       396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~  475 (695)
T 2zwa_A          396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM  475 (695)
T ss_dssp             CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred             ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence            35555554 432    46889998887644332 1     011 1112333333 677778877532      4777887


Q ss_pred             CccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCC--eEEEEecCCCceEEEee--
Q psy10867        149 SRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDR--TCKIFDLCTGEDLLSLI--  224 (343)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~--~i~~wd~~~~~~~~~~~--  224 (343)
                      .+..-..                    +..+......- +++...++  .+++.|+.++  .+.+||..+.+-...-.  
T Consensus       476 ~t~~W~~--------------------~~~~p~~R~~h-~~~~~~~~--~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g  532 (695)
T 2zwa_A          476 KTREWSM--------------------IKSLSHTRFRH-SACSLPDG--NVLILGGVTEGPAMLLYNVTEEIFKDVTPKD  532 (695)
T ss_dssp             TTTEEEE--------------------CCCCSBCCBSC-EEEECTTS--CEEEECCBCSSCSEEEEETTTTEEEECCCSS
T ss_pred             CCCcEEE--------------------CCCCCCCcccc-eEEEEcCC--EEEEECCCCCCCCEEEEECCCCceEEccCCC
Confidence            7643211                    11111111111 22222355  6777777654  68999988765322111  


Q ss_pred             -c---CCcEEEEEEcCC-CCEEEEEcC--C-----CcEEEEEeecccc--cccccccCCCCCCccc-cccCcEEEEEEcc
Q psy10867        225 -L---DTRLTCVAFDGT-EDNIYMGTS--E-----GVIKSFCLRQVPR--TRDHHIQDSTSNPDFI-GHEKQVTSLSCSI  289 (343)
Q Consensus       225 -~---~~~i~~~~~~~~-~~~l~~~~~--d-----~~i~i~d~~~~~~--~~~~~~~~~~~~~~~~-~~~~~v~~~~~s~  289 (343)
                       .   ......+.+..+ ++.++.|+.  +     ..+.+||+.+..-  ...+..     +.... ...... +++...
T Consensus       533 ~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~-----~~~~p~~~R~~~-~~~~~~  606 (695)
T 2zwa_A          533 EFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIK-----KLQHPLFQRYGS-QIKYIT  606 (695)
T ss_dssp             GGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEE-----EEECGGGCCBSC-EEEEEE
T ss_pred             CCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEE-----cCCCCCCCcccc-eEEEeC
Confidence             0   111233555655 566666665  2     4588888876541  000000     00000 001111 222333


Q ss_pred             CCCEEEEEeC--------CCcEEEEecccceee
Q psy10867        290 TGITLLSSSA--------DETLKIWHTISRQCL  314 (343)
Q Consensus       290 ~~~~l~s~~~--------dg~i~iwd~~~~~~~  314 (343)
                      ++++++.|+.        ...+.+||+.+.+-.
T Consensus       607 ~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~  639 (695)
T 2zwa_A          607 PRKLLIVGGTSPSGLFDRTNSIISLDPLSETLT  639 (695)
T ss_dssp             TTEEEEECCBCSSCCCCTTTSEEEEETTTTEEE
T ss_pred             CCEEEEECCccCCCCCCCCCeEEEEECCCCeEE
Confidence            3777777774        346899999876543

>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B

Probab=95.70  E-value=0.55  Score=36.71  Aligned_cols=247  Identities=10%  Similarity=0.022  Sum_probs=128.5

Q ss_pred             cceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEEecCCeEEEEEccCCceEEEecc
Q psy10867         38 SPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASS  117 (343)
Q Consensus        38 ~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~~  117 (343)
                      .|..++....-. ++. . ||.+..|-......+-........|..++...+. .++.. ||.|+.|-......+..-..
T Consensus        25 ~i~~ia~G~~h~-~~l-~-~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~h-s~~l~-~G~v~~wG~n~~Gqlg~P~~   99 (282)
T 3qhy_B           25 GVDAIAGGYFHG-LAL-K-GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNYH-SLALK-DGEVIAWGGNEDGQTTVPAE   99 (282)
T ss_dssp             SCCEEEECSSEE-EEE-E-TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSSE-EEEEE-TTEEEEEECCTTSTTCCCGG
T ss_pred             CCcEEEeCCCeE-EEE-E-CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCCE-EEEEE-CCEEEEeeCCCCCCCCCCcc
Confidence            566666544333 333 3 5889999765433332222223467777766443 33334 89999998654322111111


Q ss_pred             cCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCc
Q psy10867        118 HYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAK  197 (343)
Q Consensus       118 ~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  197 (343)
                      -...|..++...+.. + .-. ||.|..|-........                      ........|..++.....  
T Consensus       100 ~~~~v~~ia~G~~hs-~-al~-~G~v~~wG~n~~gqlg----------------------~~~~~~~~i~~i~~G~~~--  152 (282)
T 3qhy_B          100 ARSGVDAIAAGAWAS-Y-ALK-DGKVIAWGDDSDGQTT----------------------VPAEAQSGVTALDGGVYT--  152 (282)
T ss_dssp             GSSSEEEEEEETTEE-E-EEE-TTEEEEEECCTTSTTS----------------------CCGGGGSSEEEEEECSSE--
T ss_pred             cCCCeEEEECcCCEE-E-EEe-CCeEEEecCCCCCcCC----------------------CCccCCCCeEEEEcccCE--
Confidence            234677777754433 3 334 8999999765432110                      001122446666654432  


Q ss_pred             eEEEEeeCCCeEEEEecCCC-ceEEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccc
Q psy10867        198 SRVASVSHDRTCKIFDLCTG-EDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFI  276 (343)
Q Consensus       198 ~~l~~~~~d~~i~~wd~~~~-~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~  276 (343)
                       .++. . ||.+..|-.... +.-........|..++.-.+. .++.  .+|.|+.|=.........       +.    
T Consensus       153 -~~~l-~-~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~h-s~al--~~G~v~~wG~n~~gqlg~-------p~----  215 (282)
T 3qhy_B          153 -ALAV-K-NGGVIAWGDNYFGQTTVPAEAQSGVDDVAGGIFH-SLAL--KDGKVIAWGDNRYKQTTV-------PT----  215 (282)
T ss_dssp             -EEEE-E-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSE-EEEE--ETTEEEEEECCTTSTTCC-------CG----
T ss_pred             -EEEE-E-CCEEEEecCCCCCCCCCceecCCCeEEEEecCCE-EEEE--ECCeEEEEECCCCCCCCC-------Cc----
Confidence             3332 3 789999865432 221111123457777665432 2333  599999997655433211       11    


Q ss_pred             cccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecccCCceEEEEEccCCCeeeecc
Q psy10867        277 GHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQHKGPVLGAFLGLLPPAIHDYD  339 (343)
Q Consensus       277 ~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~  339 (343)
                      .....|..++...... ++. . ||.|+.|-.....++.   ....|.+++-.+.....++..
T Consensus       216 ~~~~~v~~i~~G~~h~-~al-~-~g~v~~wG~n~~gq~~---v~~~v~~iaaG~~h~~al~~~  272 (282)
T 3qhy_B          216 EALSGVSAIASGEWYS-LAL-K-NGKVIAWGSSRTAPSS---VQSGVSSIEAGPNAAYALKGG  272 (282)
T ss_dssp             GGGSSCCEEEECSSCE-EEE-E-TTEEEEESTTCCCCGG---GSSCEEEEEECSSCEEEEEC-
T ss_pred             ccCCCceEEEcCCCEE-EEE-E-CCEEEEecCCCCcccc---CCCCcEEEEECcCeEEEEecC
Confidence            1123466676544432 333 3 8999999765433322   234677777666655555544

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=95.47  E-value=1  Score=38.12  Aligned_cols=103  Identities=11%  Similarity=0.081  Sum_probs=61.5

Q ss_pred             cceEEEEeCCce--EEEEEcCCCeEEEEeCCCcc---ccee----cc-----cCCcceEEEEECCC----CCEEEE-ec-
Q psy10867         38 SPHSMCLLGNDY--VLGVEKGKPMIQAWPVNSQE---KAQL----RL-----ICPGRISSMQASPD----AAYIAV-SI-   97 (343)
Q Consensus        38 ~v~~~~~~~~~~--~~~~~~~~~~i~iw~~~~~~---~~~~----~~-----~~~~~v~~~~~s~~----~~~l~~-~~-   97 (343)
                      ....|+|.|++.  ++++-.. |.|++++.....   .+..    +.     ........|+|+|+    +.+.++ +. 
T Consensus        15 ~P~~~a~~pdG~~rl~V~er~-G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~   93 (463)
T 2wg3_C           15 QPVGALHSGDGSQRLFILEKE-GYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN   93 (463)
T ss_dssp             SEEEEECCSSSSCCEEEEETT-TEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred             CceEEEECCCCCeEEEEEeCC-ceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence            678999999984  7777665 999999754321   1111    11     11456889999996    444443 32 


Q ss_pred             -C----------CeEEEEEccCC----------ceEEEec--ccCCCeEEEEEecCCCEEEEecCCC
Q psy10867         98 -E----------TKLHMWQISSG----------RLLATAS--SHYQPITIVKWSADSNFIVTGGEDG  141 (343)
Q Consensus        98 -d----------~~i~v~~~~~~----------~~~~~~~--~~~~~v~~~~~~~~~~~l~s~~~dg  141 (343)
                       +          ..|.-|.+..+          +.+..+.  .....-..|+|.|||.+.++.+..+
T Consensus        94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~  160 (463)
T 2wg3_C           94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGM  160 (463)
T ss_dssp             CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTT
T ss_pred             CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCC
Confidence             1          14555665421          2222222  1123457899999998777766543

>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}

Probab=95.43  E-value=0.69  Score=36.00  Aligned_cols=205  Identities=12%  Similarity=0.085  Sum_probs=111.8

Q ss_pred             ceEEEE-ECCCCCEEEEecCCeEEE---EEccCCceEEEecccCCCeEEEEEec--CCCEEEEecCCCeEEEeecCccce
Q psy10867         80 RISSMQ-ASPDAAYIAVSIETKLHM---WQISSGRLLATASSHYQPITIVKWSA--DSNFIVTGGEDGTICVWQLSRLIC  153 (343)
Q Consensus        80 ~v~~~~-~s~~~~~l~~~~d~~i~v---~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~s~~~dg~i~iwd~~~~~~  153 (343)
                      .+..+. .+....+++.+..|.++-   |++..+.....+. ....|..+.. +  +...++..+.+|.++...+.... 
T Consensus        25 ~~~~~~~~~t~~~ll~fT~~G~v~~~~~~~lp~~~~~~ll~-~~e~i~~v~~-~~~~~~~~v~~T~~G~iKr~~l~~~~-  101 (276)
T 3no0_A           25 PVVNILRVPFTEGLFLVSNRGRVYWIAGSQALQGSKVSLKS-REEKIVGAFI-REKFGNRLLLATKKGYVKKIPLAEFE-  101 (276)
T ss_dssp             CEEEEEEEETTSCEEEEETTSEEEEECSHHHHTSEECCCSS-TTCCEEEEEE-GGGSCSEEEEEETTSEEEEEEGGGTT-
T ss_pred             eEEEEEEECCCCEEEEEcCCCeEEEEEhhhCccCcccccCC-CCCEEEEEEC-CcCCCCEEEEEeCCCEEEEEEHHHhh-
Confidence            344433 333344555567775543   4443332111132 3455666544 4  46789999999999999876642 


Q ss_pred             eeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCC---------CceEEEee
Q psy10867        154 KQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCT---------GEDLLSLI  224 (343)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~---------~~~~~~~~  224 (343)
                      ...-               ......+. ....+..+......  ..++..+..|.+..++...         |.....+.
T Consensus       102 ~~~~---------------G~~~i~lk-egD~l~~~~~~~~~--~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~  163 (276)
T 3no0_A          102 YKAQ---------------GMPIIKLT-EGDEVVSIASSVDE--THILLFTKKGRVARFSVREVPPSTPGARGVQGIKLE  163 (276)
T ss_dssp             TCST---------------TEECSCCC-TTCCEEEEEECCSS--CEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCC
T ss_pred             hhcC---------------CeEEEecC-CCCEEEEEEEeCCC--CEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccC
Confidence            1100               00111122 22344444444444  5677888889888776532         11112233


Q ss_pred             cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEE
Q psy10867        225 LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLK  304 (343)
Q Consensus       225 ~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~  304 (343)
                      ....+..+...+++..++..+..|.++...+.........    +.-+..+ ...+.+..+....+...++..+.+|.+.
T Consensus       164 ~~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e~~~~~R~----gkGv~~i-~~~~~lv~~~~~~~~~~i~~~t~~G~~i  238 (276)
T 3no0_A          164 KNDETSGLRIWNGEPYLLVITAKGRVKKISHEEIPKTNRG----VKGTEVS-GTKDTLVDLIPIKEEVELLITTKNGKAF  238 (276)
T ss_dssp             TTCCEEEEEEESSCSEEEEEETTSCEEEEEGGGSCCCCTT----CCCEECC-CSSSCEEEEEEESSEEEEEEEETTSCEE
T ss_pred             CCCEEEEEEEeCCCCEEEEEeCCCcEEEeEHHHcccCCCC----CcceEEE-cCCCcEEEEEEeCCCCEEEEEcCCCeEE
Confidence            4556777666666778999999999999988765433211    0011112 2234454444333445677777888887


Q ss_pred             E--Eeccc
Q psy10867        305 I--WHTIS  310 (343)
Q Consensus       305 i--wd~~~  310 (343)
                      .  ++...
T Consensus       239 r~~~~~~~  246 (276)
T 3no0_A          239 YDKINQKD  246 (276)
T ss_dssp             EEEEEGGG
T ss_pred             EeeeCHHH
Confidence            7  77643

>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}

Probab=94.81  E-value=1.4  Score=36.25  Aligned_cols=269  Identities=6%  Similarity=-0.016  Sum_probs=121.3

Q ss_pred             cceEEEEeC--CceEEEEEcCCC----eEEEEeCCCcccc-eec-----cc--------CCcceEEEEECC---CCCEEE
Q psy10867         38 SPHSMCLLG--NDYVLGVEKGKP----MIQAWPVNSQEKA-QLR-----LI--------CPGRISSMQASP---DAAYIA   94 (343)
Q Consensus        38 ~v~~~~~~~--~~~~~~~~~~~~----~i~iw~~~~~~~~-~~~-----~~--------~~~~v~~~~~s~---~~~~l~   94 (343)
                      .|.+|++.|  ++.+.+++.. |    .|...+ +.++.- ...     ..        ....|.++++.|   .+.+.+
T Consensus        56 ~v~~i~~dp~~~~~l~~g~~~-g~~g~gl~~s~-D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~  133 (394)
T 3b7f_A           56 TIHHIVQDPREPERMLMAART-GHLGPTVFRSD-DGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYA  133 (394)
T ss_dssp             EEEEEEECSSSTTCEEEEEEC---CCEEEEEES-STTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEE
T ss_pred             ceEEEEECCCCCCeEEEEecC-CCCCccEEEeC-CCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEEE
Confidence            799999998  6677776655 4    343332 222211 111     00        112577899986   455666


Q ss_pred             EecCCeEEEEEccCCceEEEecc-------------------cCCCeEEEEEec-CCCEEEEecCCCeEEEeecCcccee
Q psy10867         95 VSIETKLHMWQISSGRLLATASS-------------------HYQPITIVKWSA-DSNFIVTGGEDGTICVWQLSRLICK  154 (343)
Q Consensus        95 ~~~d~~i~v~~~~~~~~~~~~~~-------------------~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~  154 (343)
                      ++..+.|...+ +.++.-..+..                   ....+.+|.+.| +...++.+..++.|...+-. +..-
T Consensus       134 g~~~ggl~~S~-DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~ggl~~s~Dg-G~tW  211 (394)
T 3b7f_A          134 GTSPQGLFRST-DHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSSGGVFESTDA-GTDW  211 (394)
T ss_dssp             EEETTEEEEES-STTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEETBEEEEESST-TSSC
T ss_pred             EecCCcEEEEc-CCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECCCCEEEECCC-CCCc
Confidence            66666655443 22332222211                   123578899987 34455555544544433221 1111


Q ss_pred             eeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee--cC----Cc
Q psy10867        155 QTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI--LD----TR  228 (343)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~--~~----~~  228 (343)
                      ..+.......   ..     +.. .......+.++.+.|..+ ..+..+...+ |...+ ..++.-..+.  ..    ..
T Consensus       212 ~~~~~~~~~~---~~-----p~~-~~~~g~~~~~i~~~~~~~-~~l~vg~~~g-l~~s~-D~G~tW~~~~~~l~~~~~~~  279 (394)
T 3b7f_A          212 KPLNRGCAAN---FL-----PDP-NVEFGHDPHCVVQHPAAP-DILYQQNHCG-IYRMD-RREGVWKRIGDAMPREVGDI  279 (394)
T ss_dssp             EECCTTCCCT---TS-----SSS-SSSSCBCEEEEEECSSST-TEEEEEETTE-EEEEE-TTTTEEECGGGGSCTTTCSC
T ss_pred             eECCCCcccc---cc-----CCC-ccccCcceeEEEECCCCC-CEEEEEcCCe-EEEeC-CCCCcceECCCCCCCCCccc
Confidence            1110000000   00     000 000013578899988643 3555555544 44333 2333332222  11    23


Q ss_pred             EEEEEEcCC-CCEEEEEcC-----------CCcEEEEEeecccccccccccCCCCCCcccccc----CcEEEEEEccC-C
Q psy10867        229 LTCVAFDGT-EDNIYMGTS-----------EGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHE----KQVTSLSCSIT-G  291 (343)
Q Consensus       229 i~~~~~~~~-~~~l~~~~~-----------d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~----~~v~~~~~s~~-~  291 (343)
                      +..++++|. ...|+++..           ++...+|............ ...     +....    .....++++|. .
T Consensus       280 ~~~i~~~p~~~~~l~~~t~~~~~~w~~~~~~~~~~~~~S~DgG~tW~~~-~~g-----lp~~~~~~~~~~~~~~~~p~~~  353 (394)
T 3b7f_A          280 GFPIVVHQRDPRTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQRQ-DRG-----LPTDQAWLTVKRQAMTADAHAP  353 (394)
T ss_dssp             EEEEEECSSCTTCEEEEECBCCSSTTCCBCCSSCCEEEESSTTSCCEEE-CBT-----SCCSSCCCCCCTBSEEECCSSS
T ss_pred             eEEEEECCCCCCEEEEEeccCCccceeecCCCceeEEEECCCCCCceEC-CCC-----CCCccccceEEEEEEEECCCCC
Confidence            567888863 344555432           2334566544322221110 000     11000    01135778874 3


Q ss_pred             CEEEEEeCCCcEEEEecccceeeeecc-cCCceEEEEEc
Q psy10867        292 ITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVLGAFLG  329 (343)
Q Consensus       292 ~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~s  329 (343)
                      ..|+.++.++.|..-+ ..|+.-..+. ....+.+++|.
T Consensus       354 ~~l~~g~~~g~l~~S~-D~G~tW~~~~~~lp~~~~v~~~  391 (394)
T 3b7f_A          354 VGVYFGTTGGEIWASA-DEGEHWQCIASHLPHIYAVQSA  391 (394)
T ss_dssp             CCEEEECTTSCEEEES-STTSBCEEEECSCSCEEEEEEE
T ss_pred             CEEEEEeCCCeEEEEC-CCCCCceEcccCCCCeeEEEEe
Confidence            4566676666655433 2344333333 34457777664

>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*

Probab=92.20  E-value=4.1  Score=33.29  Aligned_cols=135  Identities=6%  Similarity=0.041  Sum_probs=81.2

Q ss_pred             CeEEEEecCCc--eEEEEEecCCC-----CcceEEEEe---CC-----ceEEEEEcCCCeEEEEeCCCcccceecc----
Q psy10867         15 GAISVWEPKGG--TLLMSYKGASV-----LSPHSMCLL---GN-----DYVLGVEKGKPMIQAWPVNSQEKAQLRL----   75 (343)
Q Consensus        15 g~i~iwd~~~~--~~~~~~~~~~~-----~~v~~~~~~---~~-----~~~~~~~~~~~~i~iw~~~~~~~~~~~~----   75 (343)
                      -.|.+||+.+.  +.++++.-...     .....+++.   |+     +...++-...+-|.++|+.+++.-+.+.    
T Consensus       123 pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~  202 (381)
T 3q6k_A          123 PAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFK  202 (381)
T ss_dssp             CEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGS
T ss_pred             ceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCc
Confidence            36889999999  99988775421     146677777   32     3333444445789999999876543331    


Q ss_pred             cC--------------CcceEEEEECCC----CCEEEEecCCeEEEEEcc-----CCc---eEEEecccC---CCeEEEE
Q psy10867         76 IC--------------PGRISSMQASPD----AAYIAVSIETKLHMWQIS-----SGR---LLATASSHY---QPITIVK  126 (343)
Q Consensus        76 ~~--------------~~~v~~~~~s~~----~~~l~~~~d~~i~v~~~~-----~~~---~~~~~~~~~---~~v~~~~  126 (343)
                      ..              ...+..++++|+    ++.|.-+.=..-++|.+.     +..   .++.+ +..   ..-..++
T Consensus       203 pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~-G~kg~~s~~~~~~  281 (381)
T 3q6k_A          203 AERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELL-GNRGKYNDAIALA  281 (381)
T ss_dssp             CCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEE-EECCTTCCEEEEE
T ss_pred             cccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEe-eecCCCCCcceEE
Confidence            10              236788888887    666664322222333332     221   12222 222   2334566


Q ss_pred             Ee-cCCCEEEEecCCCeEEEeecCc
Q psy10867        127 WS-ADSNFIVTGGEDGTICVWQLSR  150 (343)
Q Consensus       127 ~~-~~~~~l~s~~~dg~i~iwd~~~  150 (343)
                      +. .+|.++++--....|..|+..+
T Consensus       282 ~D~~~G~ly~~~~~~~aI~~w~~~~  306 (381)
T 3q6k_A          282 YDPKTKVIFFAEANTKQVSCWNTQK  306 (381)
T ss_dssp             ECTTTCEEEEEESSSSEEEEEETTS
T ss_pred             EeCCCCeEEEEeccCCeEEEEeCCC
Confidence            75 5777777777888999999876

>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}

Probab=91.86  E-value=0.54  Score=40.91  Aligned_cols=62  Identities=11%  Similarity=0.015  Sum_probs=46.1

Q ss_pred             cEEEEEEccCCCEEEEEeCC------------CcEEEEecccceeeeecc--cCCceEEEEEccCCCeeeecccCC
Q psy10867        281 QVTSLSCSITGITLLSSSAD------------ETLKIWHTISRQCLRTIQ--HKGPVLGAFLGLLPPAIHDYDFTP  342 (343)
Q Consensus       281 ~v~~~~~s~~~~~l~s~~~d------------g~i~iwd~~~~~~~~~~~--~~~~v~~~~~sp~~~~l~~~~~~~  342 (343)
                      ..-.|+|+|.|++++.-..+            ..+.+.+..+++..+.+.  ...+++.++|+||++.|++.-.+|
T Consensus       477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvniQHP  552 (592)
T 3zwu_A          477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGIQHP  552 (592)
T ss_dssp             CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEEEST
T ss_pred             CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEEEECC
Confidence            35678999999966654322            245666777777766665  567899999999999999877666

>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*

Probab=91.06  E-value=5.5  Score=32.54  Aligned_cols=176  Identities=7%  Similarity=0.023  Sum_probs=98.0

Q ss_pred             eEEEeecCcc--ceeeeeecCCCCCCCCccccccceeeeecccccceEEEEee---cC--CCceE-EEEeeCCCeEEEEe
Q psy10867        142 TICVWQLSRL--ICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLS---KL--GAKSR-VASVSHDRTCKIFD  213 (343)
Q Consensus       142 ~i~iwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~--~~~~~-l~~~~~d~~i~~wd  213 (343)
                      +|.+||+.+.  +.++.+.++...                ......+..+.+.   |.  ..+.+ .++=+..+.|.++|
T Consensus       124 kLv~~DL~t~~~~li~~y~~p~~~----------------~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVyd  187 (381)
T 3q6k_A          124 AIVAYDLKQPNYPEVVRYYFPTRL----------------VEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYD  187 (381)
T ss_dssp             EEEEEESSSTTCCEEEEEECCGGG----------------CCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEE
T ss_pred             eEEEEECCCCCceeEEEEECCHHh----------------cccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEE
Confidence            5677788777  666665432110                1123457777777   22  11133 33434578899999


Q ss_pred             cCCCceEEEee-------------------cCCcEEEEEEcCC----CCEEEEEcCCCcEEEEEeecccccccccccCCC
Q psy10867        214 LCTGEDLLSLI-------------------LDTRLTCVAFDGT----EDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDST  270 (343)
Q Consensus       214 ~~~~~~~~~~~-------------------~~~~i~~~~~~~~----~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~  270 (343)
                      +.+++..+...                   ....+..++++|+    ++.|+.....+. ++|.+.+...... ..  ..
T Consensus       188 l~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~-~ly~V~T~~L~~~-~~--~~  263 (381)
T 3q6k_A          188 HKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAI-KVYSVNTKELKQK-GG--KL  263 (381)
T ss_dssp             TTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCS-EEEEEEHHHHSST-TC--CC
T ss_pred             CCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCC-cEEEEEHHHhhCc-ch--hh
Confidence            99887654432                   1236788999998    778877665542 3444443211110 00  11


Q ss_pred             CCCcccccc---CcEEEEEEc-cCCCEEEEEeCCCcEEEEeccc-c---eeeeecc---cCCceEEEEEccCCCeeeec
Q psy10867        271 SNPDFIGHE---KQVTSLSCS-ITGITLLSSSADETLKIWHTIS-R---QCLRTIQ---HKGPVLGAFLGLLPPAIHDY  338 (343)
Q Consensus       271 ~~~~~~~~~---~~v~~~~~s-~~~~~l~s~~~dg~i~iwd~~~-~---~~~~~~~---~~~~v~~~~~sp~~~~l~~~  338 (343)
                      .+. ..+..   ..-..+++. .+|.++++--....|..|+..+ .   +....+.   .-..+..+.+.++|..-+.+
T Consensus       264 ~v~-~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~~g~Lwv~s  341 (381)
T 3q6k_A          264 NPE-LLGNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDSKGGLWFMS  341 (381)
T ss_dssp             CCE-EEEECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECTTSCEEEEE
T ss_pred             ceE-EeeecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECCCccccCeEEECCCCeEEEEE
Confidence            121 12222   233456675 6788788888889999999865 1   1222222   22346788888887654444

>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*

Probab=90.69  E-value=1.1  Score=38.56  Aligned_cols=63  Identities=10%  Similarity=0.006  Sum_probs=46.5

Q ss_pred             CcEEEEEEccCCCEEEEEeC------------CCcEEEEecccceeeeecc--cCCceEEEEEccCCCeeeecccCC
Q psy10867        280 KQVTSLSCSITGITLLSSSA------------DETLKIWHTISRQCLRTIQ--HKGPVLGAFLGLLPPAIHDYDFTP  342 (343)
Q Consensus       280 ~~v~~~~~s~~~~~l~s~~~------------dg~i~iwd~~~~~~~~~~~--~~~~v~~~~~sp~~~~l~~~~~~~  342 (343)
                      .....|.|+++|.+.++...            ...|..++..+++....+.  ....++.++|+||++.|+++-.+|
T Consensus       476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~vQHP  552 (592)
T 4a9v_A          476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGIQHP  552 (592)
T ss_dssp             CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEEEST
T ss_pred             CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEEeCC
Confidence            45678999999987773321            1256777777787666554  346799999999999999887666

>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}

Probab=90.34  E-value=9.8  Score=34.22  Aligned_cols=227  Identities=10%  Similarity=0.063  Sum_probs=114.8

Q ss_pred             ceEEEE-ECCCCCEEEE--ecC----CeEEEEEccCCceEE-Eec-ccCC------CeEEEEEecCCCEEEEe-------
Q psy10867         80 RISSMQ-ASPDAAYIAV--SIE----TKLHMWQISSGRLLA-TAS-SHYQ------PITIVKWSADSNFIVTG-------  137 (343)
Q Consensus        80 ~v~~~~-~s~~~~~l~~--~~d----~~i~v~~~~~~~~~~-~~~-~~~~------~v~~~~~~~~~~~l~s~-------  137 (343)
                      ....+. ++|++++++.  +..    ..++++|+.+++.+. .+. .-..      ....++|..+...+++.       
T Consensus       130 ~~~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~  209 (711)
T 4hvt_A          130 AYRGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEI  209 (711)
T ss_dssp             EEEEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCB
T ss_pred             EEeceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCCEEEEEeCCCCCCc
Confidence            344555 8999998885  333    379999999987653 121 0000      11345787444344331       


Q ss_pred             ---cCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccce-EEEEeecCCCce---EEEEee---CCC
Q psy10867        138 ---GEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPV-THVTLSKLGAKS---RVASVS---HDR  207 (343)
Q Consensus       138 ---~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~~---~l~~~~---~d~  207 (343)
                         +....|+.|.+-+.....                    ...+.+....+ .....++++...   .+++.+   ...
T Consensus       210 ~~~~~~~~v~~~~~Gt~~~~~--------------------~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  269 (711)
T 4hvt_A          210 TSSLYPNSLYIWKRGESIEKA--------------------KKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNY  269 (711)
T ss_dssp             CTTSSBCEEEEEETTSCGGGC--------------------EEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCE
T ss_pred             CcCCCCCEEEEEECCCChHHC--------------------eEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCce
Confidence               112457777776543211                    11222222222 234445555322   244433   224


Q ss_pred             eEEEEecCCCc-eEEEeecCCcEEEEEEcCCCCEEEEE----------cCCCcEEEEEeeccccc----ccccccCCCCC
Q psy10867        208 TCKIFDLCTGE-DLLSLILDTRLTCVAFDGTEDNIYMG----------TSEGVIKSFCLRQVPRT----RDHHIQDSTSN  272 (343)
Q Consensus       208 ~i~~wd~~~~~-~~~~~~~~~~i~~~~~~~~~~~l~~~----------~~d~~i~i~d~~~~~~~----~~~~~~~~~~~  272 (343)
                      .+.+.|..... ....+..+.... +..+.++.+++..          ...+.|...|+......    ..        .
T Consensus       270 ~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~--------~  340 (711)
T 4hvt_A          270 DNYILDTKYKNLKLQKINMPSDAT-LQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTS--------L  340 (711)
T ss_dssp             EEEEEECSSSSCEEEECCSCTTCE-EEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTT--------C
T ss_pred             eEEEEcCCCCCCcceEeecCCcce-EeeeECCEEEEEECcccccccccCCCCeEEEEECCccccccccccc--------c
Confidence            56666654321 223333322222 2233445444422          14677888888764210    10        1


Q ss_pred             Cc-c-ccccCcEEEEEEccCCCEEEEEeCCC--cEEEEecccce-eeee-cc--cCCceEEEEEccCCCeee
Q psy10867        273 PD-F-IGHEKQVTSLSCSITGITLLSSSADE--TLKIWHTISRQ-CLRT-IQ--HKGPVLGAFLGLLPPAIH  336 (343)
Q Consensus       273 ~~-~-~~~~~~v~~~~~s~~~~~l~s~~~dg--~i~iwd~~~~~-~~~~-~~--~~~~v~~~~~sp~~~~l~  336 (343)
                      .. + ......+..+.+..+ .++++...++  .|+++++.+++ .... +.  ..+.+.....++++..++
T Consensus       341 ~~~~~~~~~~~l~~~~~~~~-~l~~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~  411 (711)
T 4hvt_A          341 KILFTPTANEVFNFISTTKD-RVFLATYDNVVAKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEAL  411 (711)
T ss_dssp             EEEECCCTTEEEEEEEECSS-CEEEEEEETTEEEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEE
T ss_pred             eEEECCCCCCeEEEEEEECC-EEEEEEEECCEEEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEE
Confidence            11 1 123346778888865 5667777776  46778876665 2333 33  235677777777776554

>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B

Probab=90.05  E-value=12  Score=34.95  Aligned_cols=38  Identities=29%  Similarity=0.312  Sum_probs=32.8

Q ss_pred             cEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc
Q psy10867        281 QVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ  318 (343)
Q Consensus       281 ~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~  318 (343)
                      .+.+++..++..++++-+.|+++|+|++.+++++.+..
T Consensus       237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d  274 (950)
T 4gq2_M          237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE  274 (950)
T ss_dssp             CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred             eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence            46777788888899999999999999999999887753

>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1

Probab=89.32  E-value=7.1  Score=31.11  Aligned_cols=184  Identities=10%  Similarity=0.007  Sum_probs=98.1

Q ss_pred             cCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCe
Q psy10867        129 ADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRT  208 (343)
Q Consensus       129 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~  208 (343)
                      |+...+++.+.+|.|+--.+........                  ....+. ....+..+......  ..++..+..|.
T Consensus         3 ~~e~~~v~lT~~G~IKr~~~~~~~~~~~------------------~~~~lk-e~D~l~~~~~~~t~--d~ll~fT~~Gr   61 (323)
T 1wp5_A            3 ASEDVIVTVTKDGYVKRTSLRSYAASNG------------------QDFAMK-DTDRLLAMLEMNTK--DVLLLFTNKGN   61 (323)
T ss_dssp             SCCEEEEEEETTCEEEEEEHHHHHHTTT------------------CCCCCC-TTCCEEEEEEEETT--SEEEEEETTSE
T ss_pred             cCCcEEEEEeCCCEEEEeEHHHhhhcCc------------------cccccC-CCCEEEEEEEECCC--CEEEEEECCCE
Confidence            5667888999999998776553311000                  001112 22334444444444  46666777787


Q ss_pred             EEEEe---cCCC------ceE---EEeecCCcEEEEEEcC---CCCEEEEEcCCCcEEEEEeecccccccccccCCCCCC
Q psy10867        209 CKIFD---LCTG------EDL---LSLILDTRLTCVAFDG---TEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNP  273 (343)
Q Consensus       209 i~~wd---~~~~------~~~---~~~~~~~~i~~~~~~~---~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~  273 (343)
                      ++-+.   ++..      .++   ..+.....|..+..-+   ++.+++..+.+|.++...+........   ..+....
T Consensus        62 ~~~~~~~elp~~~r~a~G~~i~~~i~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r---~~G~~ai  138 (323)
T 1wp5_A           62 YLYCPVHELPDIRWKDLGQHIANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRY---SKPLTGI  138 (323)
T ss_dssp             EEEEEGGGSCBCCTTSCCEEGGGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCC---SSCEECS
T ss_pred             EEEEEHHHCcCCCCCCCCcChhhccCCCCCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccc---cCceEEE
Confidence            65544   3322      211   1122344566554333   266899999999999998876544321   0111122


Q ss_pred             ccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccc---------eeeeecccCCceEEEEEccCCC-eeee
Q psy10867        274 DFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISR---------QCLRTIQHKGPVLGAFLGLLPP-AIHD  337 (343)
Q Consensus       274 ~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~---------~~~~~~~~~~~v~~~~~sp~~~-~l~~  337 (343)
                      .+... +.+..+........++..+.+|.+..+....-         -....+.....|.++..-+++. .|+.
T Consensus       139 ~l~e~-d~lv~~~~~~~~~~i~l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~ll~  211 (323)
T 1wp5_A          139 NLKND-DQVVDVHLTDGMNELFLVTHNGYALWFDESEVSIVGVRAAGVKGMNLKEGDYIVSGQLITSKDESIVV  211 (323)
T ss_dssp             CCCTT-CCEEEEEEECSCSEEEEEETTSEEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEECCTTCEEEE
T ss_pred             EeCCC-CEEEEEEEeCCCCEEEEEeCCCcEEEEEHHHCcccCCCCcCEEEEEeCCCCEEEEEEEEcCCCcEEEE
Confidence            23322 44555554445567888888998888876431         1222233445566665444443 4443

>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1

Probab=88.06  E-value=8.5  Score=30.47  Aligned_cols=195  Identities=12%  Similarity=0.077  Sum_probs=106.2

Q ss_pred             CCceEEEEEcCCCeEEEEeCCCcccce--------ecccCCcceEEEE-ECCCCCEEEEecCCeEEEEEccCCceE----
Q psy10867         46 GNDYVLGVEKGKPMIQAWPVNSQEKAQ--------LRLICPGRISSMQ-ASPDAAYIAVSIETKLHMWQISSGRLL----  112 (343)
Q Consensus        46 ~~~~~~~~~~~~~~i~iw~~~~~~~~~--------~~~~~~~~v~~~~-~s~~~~~l~~~~d~~i~v~~~~~~~~~----  112 (343)
                      |+..+++..+.+|.|+--.+..-+...        ......+.+..+. .+....+++.+..|.++-.....-...    
T Consensus         6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~~   85 (312)
T 1suu_A            6 QKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDGDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRAS   85 (312)
T ss_dssp             --CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC-----
T ss_pred             CCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCCCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCccC
Confidence            455556666666999877554322111        0011223343333 334445555677887666654321110    


Q ss_pred             --------EEecccCCCeEEEEEec---CCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecc
Q psy10867        113 --------ATASSHYQPITIVKWSA---DSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQ  181 (343)
Q Consensus       113 --------~~~~~~~~~v~~~~~~~---~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (343)
                              ..+. ....|..+...+   +..+++..+..|.++...+.........               ......+..
T Consensus        86 ~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~---------------G~~~i~L~~  149 (312)
T 1suu_A           86 KGQNISELINLG-DQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSR---------------GVIVIKLND  149 (312)
T ss_dssp             --CBGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC-------------------CEECBCCCT
T ss_pred             CCcChhhccCCC-CCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCC---------------cEEEEecCC
Confidence                    0122 123455554333   4567888899999999887654221100               011122233


Q ss_pred             cccceEEEEeecCCCceEEEEeeCCCeEEEEecCCC-------ceEEE--eecCCcEEEEEEcCCCCEEEEEcCCCcEEE
Q psy10867        182 HSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTG-------EDLLS--LILDTRLTCVAFDGTEDNIYMGTSEGVIKS  252 (343)
Q Consensus       182 ~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~-------~~~~~--~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i  252 (343)
                       ...+..+......  ..++..+.+|.+..+....-       +-+..  +.....+..+..-.++..+++.+..|..+.
T Consensus       150 -~d~lv~~~~~~~~--~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~~d~vv~~~~v~~~~~l~~vt~~G~~kr  226 (312)
T 1suu_A          150 -KDFVTSAEIVFKD--EKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKEGDLFVKVLSVKENPYLLIVSENGYGKR  226 (312)
T ss_dssp             -TCCEEEEEEECTT--CEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCTTCCEEEEEECTTCSEEEEEETTSEEEE
T ss_pred             -CCEEEEEEEeCCC--CEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCCCCEEEEEEEECCCCeEEEEECCCceEE
Confidence             4455555555434  56888889999988876531       11222  223455667666666777888899999999


Q ss_pred             EEeeccc
Q psy10867        253 FCLRQVP  259 (343)
Q Consensus       253 ~d~~~~~  259 (343)
                      .++....
T Consensus       227 ~~~~e~~  233 (312)
T 1suu_A          227 LNMSKIS  233 (312)
T ss_dssp             EEGGGSC
T ss_pred             EEHHHhc
Confidence            9887653

>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A

Probab=87.75  E-value=2.6  Score=37.49  Aligned_cols=36  Identities=17%  Similarity=0.211  Sum_probs=29.4

Q ss_pred             cEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc
Q psy10867        281 QVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ  318 (343)
Q Consensus       281 ~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~  318 (343)
                      .|.++.+  +..++++-+.|.++|+|++.+++++.+..
T Consensus       223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~D  258 (729)
T 3f7f_A          223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYD  258 (729)
T ss_dssp             EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred             eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeec
Confidence            4555544  46799999999999999999999887765

>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B

Probab=87.58  E-value=19  Score=33.81  Aligned_cols=38  Identities=16%  Similarity=0.179  Sum_probs=32.1

Q ss_pred             ceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee
Q psy10867        185 PVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI  224 (343)
Q Consensus       185 ~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~  224 (343)
                      .+.+++..++.  .++++-+.|+++|+|++.+++++.+..
T Consensus       237 ~~~~~~~~~~~--~~lftl~~D~~LRiWsl~t~~~v~t~d  274 (950)
T 4gq2_M          237 TIISMIFLSTY--NVLVMLSLDYKLKVLDLSTNQCVETIE  274 (950)
T ss_dssp             CEEEEEEETTT--TEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred             eEEEEeecCCC--cEEEEEECCCEEEEEECCCCCeEeeec
Confidence            46667777776  799999999999999999999888764

>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}

Probab=87.22  E-value=11  Score=30.84  Aligned_cols=68  Identities=7%  Similarity=0.007  Sum_probs=38.0

Q ss_pred             CcceEEEEECC--CCCEEEEecCC----eEEEEEccCCceEEEecc--------------cCCCeEEEEEec-C-CCEEE
Q psy10867         78 PGRISSMQASP--DAAYIAVSIET----KLHMWQISSGRLLATASS--------------HYQPITIVKWSA-D-SNFIV  135 (343)
Q Consensus        78 ~~~v~~~~~s~--~~~~l~~~~d~----~i~v~~~~~~~~~~~~~~--------------~~~~v~~~~~~~-~-~~~l~  135 (343)
                      ...|.+|++.|  ++.+.+++..+    .|...+ +.++.-..+..              ....|.++++.| + ...+.
T Consensus        54 ~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~-D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~  132 (394)
T 3b7f_A           54 GHTIHHIVQDPREPERMLMAARTGHLGPTVFRSD-DGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWY  132 (394)
T ss_dssp             TSEEEEEEECSSSTTCEEEEEEC--CCEEEEEES-STTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEE
T ss_pred             CCceEEEEECCCCCCeEEEEecCCCCCccEEEeC-CCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEE
Confidence            45799999998  66777766555    444332 33332222211              112477888887 2 45666


Q ss_pred             EecCCCeEEEe
Q psy10867        136 TGGEDGTICVW  146 (343)
Q Consensus       136 s~~~dg~i~iw  146 (343)
                      .++..+.|...
T Consensus       133 ~g~~~ggl~~S  143 (394)
T 3b7f_A          133 AGTSPQGLFRS  143 (394)
T ss_dssp             EEEETTEEEEE
T ss_pred             EEecCCcEEEE
Confidence            66655655544

>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}

Probab=87.04  E-value=10  Score=30.27  Aligned_cols=232  Identities=10%  Similarity=0.056  Sum_probs=123.0

Q ss_pred             cceEEEEE-CCCCCEEEEecCCeEEEEE---ccCC------ceEEE-ec-ccCCCeEEEEEec---CCCEEEEecCCCeE
Q psy10867         79 GRISSMQA-SPDAAYIAVSIETKLHMWQ---ISSG------RLLAT-AS-SHYQPITIVKWSA---DSNFIVTGGEDGTI  143 (343)
Q Consensus        79 ~~v~~~~~-s~~~~~l~~~~d~~i~v~~---~~~~------~~~~~-~~-~~~~~v~~~~~~~---~~~~l~s~~~dg~i  143 (343)
                      +.+..+.. +....+|+.+..|.++-..   +...      ..+.. +. .....|..+...+   +..+++..+.+|.+
T Consensus        42 D~~~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~G~~i~~~l~l~~~e~i~~~~~~~~~~~e~~~v~~T~~G~i  121 (327)
T 3uc1_A           42 DIVAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEASRTARGQHVANLLAFQPEERIAQVIQIRGYTDAPYLVLATRNGLV  121 (327)
T ss_dssp             GCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCSSSCCEEHHHHTTCCTTCCEEEEEEESSTTSSSEEEEEETTSEE
T ss_pred             CEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCCCccCCCEEHHHccCCCCCCEEEEEEEeccCCCCCEEEEEcCCCEE
Confidence            34444433 3344455557777655444   3322      22111 11 1234565554433   46789999999999


Q ss_pred             EEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecC--CCc---
Q psy10867        144 CVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLC--TGE---  218 (343)
Q Consensus       144 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~--~~~---  218 (343)
                      +.-.+........-               ......+.. ...+..+......  ..++..+..|.+..+...  .-.   
T Consensus       122 Kr~~l~~~~~~~r~---------------G~~~i~lke-~D~lv~~~~~~~~--d~ill~T~~G~~~rf~~~~~eip~~g  183 (327)
T 3uc1_A          122 KKSKLTDFDSNRSG---------------GIVAVNLRD-NDELVGAVLCSAG--DDLLLVSANGQSIRFSATDEALRPMG  183 (327)
T ss_dssp             EEEEGGGGCCCCSS---------------CEESCBCCT-TCCEEEEEEECTT--CEEEEEETTSEEEEEECCTTTSCCCC
T ss_pred             EEeEHHHhhccccC---------------ceEEEEECC-CCEEEEEEEecCC--CEEEEEECCCeEEEEECcccccCcCC
Confidence            99887664321100               001112222 3444445444444  567778888888877665  211   


Q ss_pred             ------eEEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCC
Q psy10867        219 ------DLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGI  292 (343)
Q Consensus       219 ------~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~  292 (343)
                            ....+.....|.++...+++.+++..+..|.++.-.+........-  ..+.....+....+.+..+....+..
T Consensus       184 r~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~--~~G~~~~~l~~~~d~lv~~~~~~~~~  261 (327)
T 3uc1_A          184 RATSGVQGMRFNIDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRG--GKGVLTVMYDRRRGRLVGALIVDDDS  261 (327)
T ss_dssp             TTSBCEESSCCCTTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTT--SCCEESSCCCTTTCSEEEEEEECTTC
T ss_pred             cCCCCeeeecCCCCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcC--CCcEEEEEecCCCCeEEEEEEeCCCc
Confidence                  1112234556777777777789999999999999887765432210  00111112222123444444444445


Q ss_pred             EEEEEeCCCcEEEEecccc---------eeeeecccCCceEEEEEcc
Q psy10867        293 TLLSSSADETLKIWHTISR---------QCLRTIQHKGPVLGAFLGL  330 (343)
Q Consensus       293 ~l~s~~~dg~i~iwd~~~~---------~~~~~~~~~~~v~~~~~sp  330 (343)
                      .++..+.+|.+.-++...-         -.+..+.....|.++...+
T Consensus       262 ~i~l~T~~G~~ir~~~~~i~~~gR~a~GV~~i~l~~~d~vv~~~~~~  308 (327)
T 3uc1_A          262 ELYAVTSGGGVIRTAARQVRKAGRQTKGVRLMNLGEGDTLLAIARNA  308 (327)
T ss_dssp             EEEEEEGGGCEEEEEGGGSCBCCTTSCCEECTTCCTTCCEEEEEECC
T ss_pred             cEEEEcCCCeEEEEehhhccccCCCCCCeEeEecCCCCEEEEEEEcC
Confidence            6666777888777765432         1222233455666665544

>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1

Probab=84.83  E-value=13  Score=29.55  Aligned_cols=244  Identities=9%  Similarity=0.069  Sum_probs=122.5

Q ss_pred             CCceEEEEEcCCCeEEEEeCCCccc---c-eecccCCcceEE-EEECCCCCEEEEecCCeEEEEEcc---C------Cce
Q psy10867         46 GNDYVLGVEKGKPMIQAWPVNSQEK---A-QLRLICPGRISS-MQASPDAAYIAVSIETKLHMWQIS---S------GRL  111 (343)
Q Consensus        46 ~~~~~~~~~~~~~~i~iw~~~~~~~---~-~~~~~~~~~v~~-~~~s~~~~~l~~~~d~~i~v~~~~---~------~~~  111 (343)
                      |+..+++..+.+|.|+--.+..-+.   . ..+.. .+.+.. +..+....+++.+..|.++-+...   .      |.+
T Consensus         3 ~~e~~~v~lT~~G~IKr~~~~~~~~~~~~~~~lke-~D~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G~~   81 (323)
T 1wp5_A            3 ASEDVIVTVTKDGYVKRTSLRSYAASNGQDFAMKD-TDRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQH   81 (323)
T ss_dssp             SCCEEEEEEETTCEEEEEEHHHHHHTTTCCCCCCT-TCCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSCCEE
T ss_pred             cCCcEEEEEeCCCEEEEeEHHHhhhcCccccccCC-CCEEEEEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCCCCCcC
Confidence            4555666666668888665432211   0 11222 233433 334445556666788876655542   2      221


Q ss_pred             EEE-ec-ccCCCeEEEEEec---CCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccce
Q psy10867        112 LAT-AS-SHYQPITIVKWSA---DSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPV  186 (343)
Q Consensus       112 ~~~-~~-~~~~~v~~~~~~~---~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  186 (343)
                      +.. +. .....|..+...+   ++.+++..+.+|.++...+........ .             .......+... ..+
T Consensus        82 i~~~i~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r-~-------------~G~~ai~l~e~-d~l  146 (323)
T 1wp5_A           82 IANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRY-S-------------KPLTGINLKND-DQV  146 (323)
T ss_dssp             GGGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCC-S-------------SCEECSCCCTT-CCE
T ss_pred             hhhccCCCCCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccc-c-------------CceEEEEeCCC-CEE
Confidence            111 11 1223465544333   256788999999999988765432110 0             00011112222 444


Q ss_pred             EEEEeecCCCceEEEEeeCCCeEEEEecCCC-------ceEEEe--ecCCcEEEEEEcCCCC-EEEEEcCCCcEEEEEee
Q psy10867        187 THVTLSKLGAKSRVASVSHDRTCKIFDLCTG-------EDLLSL--ILDTRLTCVAFDGTED-NIYMGTSEGVIKSFCLR  256 (343)
Q Consensus       187 ~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~-------~~~~~~--~~~~~i~~~~~~~~~~-~l~~~~~d~~i~i~d~~  256 (343)
                      -.+......  ..++..+.+|.+..+....-       +-+.-+  .....+.++...+++. .+++.+..|..+..++.
T Consensus       147 v~~~~~~~~--~~i~l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~  224 (323)
T 1wp5_A          147 VDVHLTDGM--NELFLVTHNGYALWFDESEVSIVGVRAAGVKGMNLKEGDYIVSGQLITSKDESIVVATQRGAVKKMKLT  224 (323)
T ss_dssp             EEEEEECSC--SEEEEEETTSEEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEECCTTCEEEEEETTSEEEEEEGG
T ss_pred             EEEEEeCCC--CEEEEEeCCCcEEEEEHHHCcccCCCCcCEEEEEeCCCCEEEEEEEEcCCCcEEEEEECCCceEEEEHH
Confidence            444444434  46777888898888876421       112222  2344566665544455 78888889998888776


Q ss_pred             cccccccccccCCCC-CCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecc
Q psy10867        257 QVPRTRDHHIQDSTS-NPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTI  309 (343)
Q Consensus       257 ~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~  309 (343)
                      .......-  ..+.. ...+......+..+....++..++..+.+|.+.-..+.
T Consensus       225 e~~~~~Rg--~kGv~~~~~~~~~~~~l~~~~~v~~~~~i~~it~~g~~ir~~~~  276 (323)
T 1wp5_A          225 EFEKATRA--KRGVVILRELKANPHRISGFVVAQDSDTIYLQTEKSFIETIKVG  276 (323)
T ss_dssp             GSCCCCTT--SCCEECSCCCSSSCCCEEEEEEECTTCEEEEEETTSCEEEEEGG
T ss_pred             HccccCCC--CCCEECeeecCCCCceEEEEEEeCCCCeEEEEeCCCeEEEEEhh
Confidence            63221110  00000 11122222244433332334456666777777666654

>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}

Probab=84.19  E-value=3.6  Score=39.37  Aligned_cols=38  Identities=16%  Similarity=0.179  Sum_probs=30.9

Q ss_pred             ceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee
Q psy10867        185 PVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI  224 (343)
Q Consensus       185 ~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~  224 (343)
                      .+.+++..++.  .++++-+.|+++|+|++.+++++.+..
T Consensus       239 ~~vs~~~~~~~--~~lftL~~D~~LRiWsl~t~~~v~t~D  276 (1139)
T 4fhn_B          239 TIISMIFLSTY--NVLVMLSLDYKLKVLDLSTNQCVETIE  276 (1139)
T ss_dssp             CBSCCEEETTT--TEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred             eeEEeeccCCc--cEEEEEeCCCEEEEEECCCCCeEEeec
Confidence            34455556666  789999999999999999999988765

>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1

Probab=83.28  E-value=15  Score=29.02  Aligned_cols=206  Identities=11%  Similarity=0.051  Sum_probs=111.5

Q ss_pred             CCCCEEE-EecCCeEEEEEccCCce-------EE--EecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeee
Q psy10867         88 PDAAYIA-VSIETKLHMWQISSGRL-------LA--TASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTV  157 (343)
Q Consensus        88 ~~~~~l~-~~~d~~i~v~~~~~~~~-------~~--~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~  157 (343)
                      ++..+++ .+.+|.|+-..+..-+.       +.  .++. .+.+..+........++..+..|.++-+....-.....-
T Consensus         6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke-~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~   84 (312)
T 1suu_A            6 QKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLND-GDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRA   84 (312)
T ss_dssp             --CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCT-TCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC----
T ss_pred             CCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCC-CCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCcc
Confidence            3444444 47888888877654321       11  1222 234555555556667777888898777665432111000


Q ss_pred             ecCCCCCCCCccccccceeeeecccccceEEEEeec---CCCceEEEEeeCCCeEEEEecCCCc-------eEEEeecCC
Q psy10867        158 AFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSK---LGAKSRVASVSHDRTCKIFDLCTGE-------DLLSLILDT  227 (343)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~~~l~~~~~d~~i~~wd~~~~~-------~~~~~~~~~  227 (343)
                      .      .+..   .. ....+. ....|..+...+   ..  .+++..+..|.++...+....       ....+....
T Consensus        85 ~------~G~~---i~-~~l~l~-~~e~i~~~~~~~~~~~~--~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~~d  151 (312)
T 1suu_A           85 S------KGQN---IS-ELINLG-DQEEILTIKNSKDLTDD--AYLLLTTASGKIARFESTDFKAVKSRGVIVIKLNDKD  151 (312)
T ss_dssp             ---------CB---GG-GTSCCC-TTCCEEEEEEESCCCTT--CEEEEEETTSEEEEEEGGGGCC----CEECBCCCTTC
T ss_pred             C------CCcC---hh-hccCCC-CCCEEEEEEEeccCCCC--CEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCCCC
Confidence            0      0000   00 011112 223344443332   23  578888999999988775332       122223345


Q ss_pred             cEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEe
Q psy10867        228 RLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWH  307 (343)
Q Consensus       228 ~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd  307 (343)
                      .+..+.....+..++..+.+|.+..+..........  ...+.....+.. ...|.++..-.++..+++.+..|..+..+
T Consensus       152 ~lv~~~~~~~~~~i~l~T~~G~~~r~~~~ev~~~gR--~~~Gv~~i~L~~-~d~vv~~~~v~~~~~l~~vt~~G~~kr~~  228 (312)
T 1suu_A          152 FVTSAEIVFKDEKVICLSKKGSAFIFNSRDVRLTNR--GTQGVCGMKLKE-GDLFVKVLSVKENPYLLIVSENGYGKRLN  228 (312)
T ss_dssp             CEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCT--TBCCEECCCCCT-TCCEEEEEECTTCSEEEEEETTSEEEEEE
T ss_pred             EEEEEEEeCCCCEEEEEeCCCcEEEEEHHHccccCC--CCCCeEeEEeCC-CCEEEEEEEECCCCeEEEEECCCceEEEE
Confidence            566666655667888899999999998876322211  011222223332 34566665545566788889999999988


Q ss_pred             ccc
Q psy10867        308 TIS  310 (343)
Q Consensus       308 ~~~  310 (343)
                      +..
T Consensus       229 ~~e  231 (312)
T 1suu_A          229 MSK  231 (312)
T ss_dssp             GGG
T ss_pred             HHH
Confidence            753

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=83.27  E-value=20  Score=30.30  Aligned_cols=52  Identities=6%  Similarity=0.028  Sum_probs=35.6

Q ss_pred             cceEEEEECCCCC--EEEEecCCeEEEEEccCC---ceEEEec---------ccCCCeEEEEEecC
Q psy10867         79 GRISSMQASPDAA--YIAVSIETKLHMWQISSG---RLLATAS---------SHYQPITIVKWSAD  130 (343)
Q Consensus        79 ~~v~~~~~s~~~~--~l~~~~d~~i~v~~~~~~---~~~~~~~---------~~~~~v~~~~~~~~  130 (343)
                      .....|+|.||+.  +|++...|.|++++....   +.+..+.         ........|+|+|+
T Consensus        14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~   79 (463)
T 2wg3_C           14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPN   79 (463)
T ss_dssp             SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTT
T ss_pred             CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCC
Confidence            4557899999985  888888899999975422   1222221         11356789999985

>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}

Probab=83.25  E-value=16  Score=29.17  Aligned_cols=124  Identities=12%  Similarity=0.086  Sum_probs=76.0

Q ss_pred             cceEEEEeecC-CCceEEEEeeCCCeEEEEecCCCce-------EEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEe
Q psy10867        184 LPVTHVTLSKL-GAKSRVASVSHDRTCKIFDLCTGED-------LLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCL  255 (343)
Q Consensus       184 ~~v~~~~~~~~-~~~~~l~~~~~d~~i~~wd~~~~~~-------~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~  255 (343)
                      ..|..+...++ .+..+++..+.+|.++--.+.....       ...+.....+..+........|+..+..|.+..+..
T Consensus        95 e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke~D~lv~~~~~~~~d~ill~T~~G~~~rf~~  174 (327)
T 3uc1_A           95 ERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRDNDELVGAVLCSAGDDLLLVSANGQSIRFSA  174 (327)
T ss_dssp             CCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCTTCCEEEEEEECTTCEEEEEETTSEEEEEEC
T ss_pred             CEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECCCCEEEEEEEecCCCEEEEEECCCeEEEEEC
Confidence            44555443332 1126899999999999887654322       122233455666666666778888899999999888


Q ss_pred             e--cccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEeccc
Q psy10867        256 R--QVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTIS  310 (343)
Q Consensus       256 ~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~  310 (343)
                      .  .......  ...+.....+. ....|.++...+++.+++..+..|.++.-.+..
T Consensus       175 ~~~eip~~gr--~a~Gv~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e  228 (327)
T 3uc1_A          175 TDEALRPMGR--ATSGVQGMRFN-IDDRLLSLNVVREGTYLLVATSGGYAKRTAIEE  228 (327)
T ss_dssp             CTTTSCCCCT--TSBCEESSCCC-TTCCEEEEEECCTTCEEEEEETTSEEEEEEGGG
T ss_pred             cccccCcCCc--CCCCeeeecCC-CCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHH
Confidence            7  3222111  01111122333 244576766666667899999999999887653

>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}

Probab=82.78  E-value=2.9  Score=39.98  Aligned_cols=38  Identities=29%  Similarity=0.312  Sum_probs=31.7

Q ss_pred             cEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc
Q psy10867        281 QVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ  318 (343)
Q Consensus       281 ~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~  318 (343)
                      .+.+++..++..++++-+.|+++|+|++.+++++.+..
T Consensus       239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D  276 (1139)
T 4fhn_B          239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE  276 (1139)
T ss_dssp             CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred             eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence            34455667788899999999999999999999888754

>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}

Probab=82.01  E-value=17  Score=28.66  Aligned_cols=243  Identities=11%  Similarity=0.027  Sum_probs=122.8

Q ss_pred             CCceEEEEEcCCCeEEEEeCCCcccce---------ecccCCcceE-EEEECCCCCEEEEecCCeEEEEEcc---CC---
Q psy10867         46 GNDYVLGVEKGKPMIQAWPVNSQEKAQ---------LRLICPGRIS-SMQASPDAAYIAVSIETKLHMWQIS---SG---  109 (343)
Q Consensus        46 ~~~~~~~~~~~~~~i~iw~~~~~~~~~---------~~~~~~~~v~-~~~~s~~~~~l~~~~d~~i~v~~~~---~~---  109 (343)
                      |+..+++..+.+|.|+--.+..-+...         .+.. .+.+. .+..+....+++.+..|.++-+...   ..   
T Consensus         1 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke-~D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~   79 (307)
T 1zi0_A            1 TQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKE-EDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRG   79 (307)
T ss_dssp             CCCEEEEEEETTSEEEEEECC---------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSS
T ss_pred             CCCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCC-CCEEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCC
Confidence            344555566666888766554322111         1112 23333 3333444556666777876555542   21   


Q ss_pred             ---ceEE---EecccCCCeEEEEEe---cCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeec
Q psy10867        110 ---RLLA---TASSHYQPITIVKWS---ADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKS  180 (343)
Q Consensus       110 ---~~~~---~~~~~~~~v~~~~~~---~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (343)
                         ..+.   .+. ....|..+...   +++.+++..+.+|.++.-.+........               .......+.
T Consensus        80 a~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r---------------~G~~~i~l~  143 (307)
T 1zi0_A           80 ARGRPIVNLLPLE-QDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRT---------------AGKVAIKLV  143 (307)
T ss_dssp             SCCEEGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCT---------------TCEESSCCC
T ss_pred             CCCeEhhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhcccc---------------CCeEEEEEC
Confidence               1111   122 23456555442   3456788899999999987764322110               000111122


Q ss_pred             ccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCc-------eEE--EeecCCcEEEEEEcCCCCEEEEEcCCCcEE
Q psy10867        181 QHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGE-------DLL--SLILDTRLTCVAFDGTEDNIYMGTSEGVIK  251 (343)
Q Consensus       181 ~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~-------~~~--~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~  251 (343)
                      .+ ..+..+......  ..++..+.+|.+..++...-.       -+.  .+.....+..+...+++..+++.+..|.++
T Consensus       144 ~~-d~lv~~~~~~~~--~~i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~K  220 (307)
T 1zi0_A          144 DG-DELIGVDLTSGE--DEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRGDGAILTATQNGYGK  220 (307)
T ss_dssp             TT-CCEEEEEEECTT--CEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEECCCSSCEEEEEETTSEEE
T ss_pred             CC-CEEEEEEEeCCC--CEEEEECCCCcEEEEEHHHcCccCCCCCCeEeEEeCCCCEEEEEEEecCCCEEEEEEcCCceE
Confidence            23 444444444443  467777888888877664211       112  223345677776656667888889999999


Q ss_pred             EEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEeccc
Q psy10867        252 SFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTIS  310 (343)
Q Consensus       252 i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~  310 (343)
                      ..++........-  ..+.....+....+.+-.+....+...++..+.+|.+.-+++..
T Consensus       221 r~~~~e~~~~~Rg--~kG~~~~~~~~~~~~lv~~~~v~~~~~l~~~t~~g~~ir~~~~~  277 (307)
T 1zi0_A          221 RTAVAEYPTKSRA--TKGVISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSE  277 (307)
T ss_dssp             EECGGGSCCCCTT--SCCEESSCCCTTTCSEEEEEEECTTCEEEEEESSCCEEEEEGGG
T ss_pred             EEEHHHhccCCCC--CCCEEeeEecCCCCeEEEEEEeCCCceEEEEcCCCcEEEEeccc
Confidence            8887654321110  01111222333334554444433445566667777776666543

>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A

Probab=81.81  E-value=29  Score=31.15  Aligned_cols=36  Identities=11%  Similarity=0.338  Sum_probs=29.9

Q ss_pred             eEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeec
Q psy10867        122 ITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAF  159 (343)
Q Consensus       122 v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~  159 (343)
                      |.++.+  +..++++-+.|.++|+|++.++.+..+...
T Consensus       224 Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL  259 (729)
T 3f7f_A          224 ISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM  259 (729)
T ss_dssp             EEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred             EEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence            444444  577999999999999999999998888776

>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}

Probab=80.57  E-value=22  Score=28.97  Aligned_cols=265  Identities=11%  Similarity=0.041  Sum_probs=132.8

Q ss_pred             eCCceEEEEEcCCCeEEEEeCCCcc--------cceecccCCcceEEEEECCC-CCEEEEecCCeEEEEEc---cC----
Q psy10867         45 LGNDYVLGVEKGKPMIQAWPVNSQE--------KAQLRLICPGRISSMQASPD-AAYIAVSIETKLHMWQI---SS----  108 (343)
Q Consensus        45 ~~~~~~~~~~~~~~~i~iw~~~~~~--------~~~~~~~~~~~v~~~~~s~~-~~~l~~~~d~~i~v~~~---~~----  108 (343)
                      -|+..+++..+.+|.|+--.+..-+        .........+.+..+..... ..+|+.+..|.++-+..   ..    
T Consensus         4 I~~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lke~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~eip~~~r~   83 (370)
T 3l6v_A            4 IAPEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTKEEDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQLPEAGSN   83 (370)
T ss_dssp             CCCCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECSCCCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTT
T ss_pred             ccCCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccCCCCEEEEEEEecCCCEEEEEeCCCeEEEEEHHHCcCCCcc
Confidence            3566666666677999875433211        11111123444554444333 34555677776665543   22    


Q ss_pred             --CceEE---EecccCCCeEEEEEec---CCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeec
Q psy10867        109 --GRLLA---TASSHYQPITIVKWSA---DSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKS  180 (343)
Q Consensus       109 --~~~~~---~~~~~~~~v~~~~~~~---~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (343)
                        |..+.   .+. ....|.++...+   +..+|+.++..|.++...+........          .     ......+.
T Consensus        84 a~G~~i~~ll~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~----------~-----G~~ai~L~  147 (370)
T 3l6v_A           84 ARGRPIINWIPLE-SGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLA----------R-----GKIAINLD  147 (370)
T ss_dssp             SCCEEGGGSCCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCT----------T-----CEESSCCC
T ss_pred             cCCcCHhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccC----------C-----ceEEEEeC
Confidence              11111   122 234565554432   456899999999999988765432110          0     00111122


Q ss_pred             ccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCc-------eEEE--eecCCcEEEEEEcC---------------
Q psy10867        181 QHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGE-------DLLS--LILDTRLTCVAFDG---------------  236 (343)
Q Consensus       181 ~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~-------~~~~--~~~~~~i~~~~~~~---------------  236 (343)
                      . ...+-.+......  ..++..+..|.+..++...-.       -+.-  +.....|.++...+               
T Consensus       148 ~-~d~lv~v~~~~~~--~~i~l~T~~G~~irf~~~~v~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~~~~~~~~~~~  224 (370)
T 3l6v_A          148 E-GDALVGVALTDGD--RDVLLFASNGKTVRFGESTVRSMGRTATGVRGIRLAKGEEVVSLIVSERAGGVEDEVEDESAE  224 (370)
T ss_dssp             T-TCCEEEEEEECSC--CEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEECCC-------------
T ss_pred             C-CCEEEEEEEeCCC--ceEEEEeCCCeEEEEEccccCccCCCCCCeeeEEeCCCCEEEEEEEecccccccccccccccc
Confidence            2 3344444444433  467777888888777654211       1121  22344555555444               


Q ss_pred             --------------------CCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEE
Q psy10867        237 --------------------TEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLS  296 (343)
Q Consensus       237 --------------------~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s  296 (343)
                                          ++..+++.+..|..+...+........-  ..+.....+....+.+..+.+..+...++.
T Consensus       225 ~~~~t~~g~~~~~~~~~~~~~~~~il~vTe~G~gKrt~~~e~~~~~Rg--~kGv~~~k~~~~~g~lv~~~~v~~~d~i~l  302 (370)
T 3l6v_A          225 EVVETTDGAEPAVIDVADNGDVAYILTATENGYGKRTPLAEYPRKGRG--TQGVIGIQTTERNGKLVRAVLLGSTDEVML  302 (370)
T ss_dssp             ----------------------CEEEEEETTSEEEEEEGGGSCCBCTT--SCCEESSCCCTTTCSEEEEEEECTTCEEEE
T ss_pred             ccccccccccccccccccccCCceEEEeeCCCCEEEEEHHHhcccccC--CcceEEEEecCCCCcEEEEEEeCCCceEEE
Confidence                                4568999999999999988765432211  001111222222344555443334445555


Q ss_pred             EeCCCcEEEEeccc---------ceeeeecccCCceEEEEEcc
Q psy10867        297 SSADETLKIWHTIS---------RQCLRTIQHKGPVLGAFLGL  330 (343)
Q Consensus       297 ~~~dg~i~iwd~~~---------~~~~~~~~~~~~v~~~~~sp  330 (343)
                      .+..|.+.-..+..         |-.+..+.....|.+++.-+
T Consensus       303 iT~~G~~iR~~v~~i~~~gR~t~Gv~li~l~~~~~v~~v~~~~  345 (370)
T 3l6v_A          303 ISDGGTLVRTRGSEISRVGRNTQGVTLIRLSKGEKLQAVERLD  345 (370)
T ss_dssp             EETTCCEEEEEGGGSCBCCSSSCCEESSCCCTTCCEEEEEEEC
T ss_pred             EcCCCeEEEeeHhhCCccCCCCCCeEEEecCCCCEEEEEEEcc
Confidence            66677666555432         22233333455666665543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	343
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	1e-17
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	2e-11
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	9e-11
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	1e-10
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	1e-13
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	2e-13
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	5e-11
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	2e-10
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	4e-10
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	5e-06
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	4e-13
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	3e-10
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	3e-09
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	2e-07
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	5e-07
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	7e-07
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	8e-11
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	8e-04
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	1e-10
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	5e-09
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	3e-08
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	3e-05
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	9e-04
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	3e-10
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	3e-09
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	8e-05
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	8e-04
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	9e-09
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	3e-05
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	9e-05
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	2e-04
d1sq9a_	393	b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake	4e-08
d1sq9a_	393	b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake	4e-05
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	2e-07
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	2e-05
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	1e-04
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	3e-04
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	5e-04
d1jmxb_	346	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	4e-07
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	8e-07
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	5e-06
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	1e-05
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	7e-05
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	0.002
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	1e-06
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	1e-05
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	9e-05
d1k32a3	360	b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar	3e-06
d1k32a3	360	b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar	1e-04
d1k32a3	360	b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar	0.001
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	6e-06
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	2e-04
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	0.003
d2bbkh_	355	b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {	2e-05
d2bbkh_	355	b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {	5e-04
d2bbkh_	355	b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {	5e-04
d1pgua1	325	b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba	3e-05
d1pgua1	325	b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba	6e-04
d1pbyb_	337	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	3e-05
d1l0qa2	301	b.69.2.3 (A:1-301) Surface layer protein {Archaeon	4e-04
d1l0qa2	301	b.69.2.3 (A:1-301) Surface layer protein {Archaeon	0.001
d1l0qa2	301	b.69.2.3 (A:1-301) Surface layer protein {Archaeon	0.002
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	7e-04
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	0.002
d1mdah_	368	b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {	8e-04

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 80.2 bits (196), Expect = 1e-17
 Identities = 63/310 (20%), Positives = 114/310 (36%), Gaps = 26/310 (8%)

Query: 7   VAFSYDGS--------GAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKP 58
           V F    S          I VW+ + G    + KG +  S   +    +  +L       
Sbjct: 23  VIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHT-DSVQDISFDHSGKLLASCSADM 81

Query: 59  MIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATASS 117
            I+ W     E  +        +SS+   P+  +I   S +  + MW++ +G  + T + 
Sbjct: 82  TIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTG 141

Query: 118 HYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLH 177
           H + + +V+ + D   I +   D T+ VW ++   CK      +             P  
Sbjct: 142 HREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAE----LREHRHVVECISWAPES 197

Query: 178 VKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDG 236
             S  S      T         + S S D+T K++D+ TG  L++L+  D  +  V F  
Sbjct: 198 SYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHS 257

Query: 237 TEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLS 296
               I     +  ++ +             ++         HE  VTSL    T   +++
Sbjct: 258 GGKFILSCADDKTLRVW-----------DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVT 306

Query: 297 SSADETLKIW 306
            S D+T+K+W
Sbjct: 307 GSVDQTVKVW 316

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 62.1 bits (149), Expect = 2e-11
 Identities = 26/137 (18%), Positives = 48/137 (35%), Gaps = 24/137 (17%)

Query: 77  CPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVT 136
             G  +     P    ++ S +  + MW +S+G  L T   H   +  V + +   FI++
Sbjct: 205 ATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILS 264

Query: 137 GGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGA 196
             +D T+ VW                             +   + H   VT +   K   
Sbjct: 265 CADDKTLRVWDYKNK----------------------RCMKTLNAHEHFVTSLDFHKTA- 301

Query: 197 KSRVASVSHDRTCKIFD 213
              V + S D+T K+++
Sbjct: 302 -PYVVTGSVDQTVKVWE 317

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 59.8 bits (143), Expect = 9e-11
 Identities = 17/89 (19%), Positives = 39/89 (43%), Gaps = 1/89 (1%)

Query: 60  IQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIA-VSIETKLHMWQISSGRLLATASSH 118
           I+ W V++       +     +  +       +I   + +  L +W   + R + T ++H
Sbjct: 229 IKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAH 288

Query: 119 YQPITIVKWSADSNFIVTGGEDGTICVWQ 147
              +T + +   + ++VTG  D T+ VW+
Sbjct: 289 EHFVTSLDFHKTAPYVVTGSVDQTVKVWE 317

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 59.4 bits (142), Expect = 1e-10
 Identities = 43/241 (17%), Positives = 83/241 (34%), Gaps = 29/241 (12%)

Query: 114 TASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTV---------------- 157
             S H  P+T V +    + +V+  ED TI VW       ++T+                
Sbjct: 12  ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 71

Query: 158 --AFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLC 215
                        +        +++ H       ++S +     + S S D+T K++++ 
Sbjct: 72  KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQ 131

Query: 216 TGEDLLSLILDTR-LTCVAFDGTEDNIYMGTSEGVIKSFC---------LRQVPRTRDHH 265
           TG  + +       +  V  +     I   +++  ++ +          LR+     +  
Sbjct: 132 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECI 191

Query: 266 IQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVL 324
                S+   I       +      G  LLS S D+T+K+W   +  CL T+  H   V 
Sbjct: 192 SWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVR 251

Query: 325 G 325
           G
Sbjct: 252 G 252

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 68.6 bits (166), Expect = 1e-13
 Identities = 18/141 (12%), Positives = 46/141 (32%), Gaps = 4/141 (2%)

Query: 9   FSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLL--GNDYVLGVEKGKPMIQAWPVN 66
            S     +  +W+ + G    ++ G      +++C    GN +  G +     +     +
Sbjct: 200 VSGACDASAKLWDVREGMCRQTFTGHE-SDINAICFFPNGNAFATGSDDATCRLFDLRAD 258

Query: 67  SQEKAQLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIV 125
            +            I+S+  S     +     +   ++W           + H   ++ +
Sbjct: 259 QELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCL 318

Query: 126 KWSADSNFIVTGGEDGTICVW 146
             + D   + TG  D  + +W
Sbjct: 319 GVTDDGMAVATGSWDSFLKIW 339

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 67.8 bits (164), Expect = 2e-13
 Identities = 38/271 (14%), Positives = 78/271 (28%), Gaps = 33/271 (12%)

Query: 79  GRISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTG 137
            +I +M    D+  +   S + KL +W   +   +         +    ++   N++  G
Sbjct: 56  AKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACG 115

Query: 138 GEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSK---- 193
           G D    ++ L        V+  + G +G          +     S   T          
Sbjct: 116 GLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQ 175

Query: 194 -----------------LGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTR-LTCVAFD 235
                                    S + D + K++D+  G    +       +  + F 
Sbjct: 176 QTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFF 235

Query: 236 GTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLL 295
              +    G+ +   + F LR       +   +             +TS+S S +G  LL
Sbjct: 236 PNGNAFATGSDDATCRLFDLRADQELMTYSHDN---------IICGITSVSFSKSGRLLL 286

Query: 296 SSSADETLKIWHTISRQCLRTIQ-HKGPVLG 325
           +   D    +W  +       +  H   V  
Sbjct: 287 AGYDDFNCNVWDALKADRAGVLAGHDNRVSC 317

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 60.9 bits (146), Expect = 5e-11
 Identities = 26/152 (17%), Positives = 50/152 (32%), Gaps = 23/152 (15%)

Query: 101 LHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFG 160
             +W +  G    T + H   I  + +  + N   TG +D T  ++ L       T    
Sbjct: 208 AKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMT---- 263

Query: 161 IPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDL 220
                           +        +T V+ SK G    + +   D  C ++D    +  
Sbjct: 264 ----------------YSHDNIICGITSVSFSKSG--RLLLAGYDDFNCNVWDALKADRA 305

Query: 221 LSLIL-DTRLTCVAFDGTEDNIYMGTSEGVIK 251
             L   D R++C+        +  G+ +  +K
Sbjct: 306 GVLAGHDNRVSCLGVTDDGMAVATGSWDSFLK 337

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 59.0 bits (141), Expect = 2e-10
 Identities = 36/209 (17%), Positives = 73/209 (34%), Gaps = 38/209 (18%)

Query: 102 HMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGI 161
            +W I +G+   T + H   +  +  + D+   V+G  D +  +W +   +C+QT     
Sbjct: 167 ALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTF---- 222

Query: 162 PGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKI---FDLCTGE 218
                             + H   +  +     G  +  A+ S D TC++          
Sbjct: 223 ------------------TGHESDINAICFFPNG--NAFATGSDDATCRLFDLRADQELM 262

Query: 219 DLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGH 278
                 +   +T V+F  +   +  G  +     +   +  R                GH
Sbjct: 263 TYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGV-----------LAGH 311

Query: 279 EKQVTSLSCSITGITLLSSSADETLKIWH 307
           + +V+ L  +  G+ + + S D  LKIW+
Sbjct: 312 DNRVSCLGVTDDGMAVATGSWDSFLKIWN 340

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 57.8 bits (138), Expect = 4e-10
 Identities = 25/158 (15%), Positives = 50/158 (31%), Gaps = 27/158 (17%)

Query: 59  MIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIE---TKLHMWQISSGRLLATA 115
             + W V      Q        I+++   P+    A   +    +L   +     +  + 
Sbjct: 207 SAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSH 266

Query: 116 SSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEP 175
            +    IT V +S     ++ G +D    VW   +                       + 
Sbjct: 267 DNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKA----------------------DR 304

Query: 176 LHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFD 213
             V + H   V+ + ++  G    VA+ S D   KI++
Sbjct: 305 AGVLAGHDNRVSCLGVTDDG--MAVATGSWDSFLKIWN 340

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 45.5 bits (106), Expect = 5e-06
 Identities = 28/221 (12%), Positives = 56/221 (25%), Gaps = 11/221 (4%)

Query: 110 RLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPG------ 163
           R   T   H   I  + W  DS  +V+  +DG + +W          +            
Sbjct: 46  RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAY 105

Query: 164 SSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSL 223
           +            ++ S ++L      +      +              +        + 
Sbjct: 106 APSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTT 165

Query: 224 ILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHI-----QDSTSNPDFIGH 278
                +       T            +       V    D        ++      F GH
Sbjct: 166 CALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGH 225

Query: 279 EKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQH 319
           E  + ++     G    + S D T +++   + Q L T  H
Sbjct: 226 ESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSH 266

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 67.5 bits (163), Expect = 4e-13
 Identities = 53/292 (18%), Positives = 95/292 (32%), Gaps = 46/292 (15%)

Query: 79  GRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATAS------------------SHYQ 120
             +  ++ S D  Y+A        ++++S G L+A  S                  S   
Sbjct: 63  SVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDL 122

Query: 121 PITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTG--------- 171
            I  V +S D  F+ TG ED  I +W +        +                       
Sbjct: 123 YIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGS 182

Query: 172 ---------LTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLS 222
                    L       +              G    +A+ S DR  +++D  TG  +  
Sbjct: 183 GDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVER 242

Query: 223 LILDTR--------LTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNP- 273
           L  +          +  V F     ++  G+ +  +K + L+      D    +S +   
Sbjct: 243 LDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEV 302

Query: 274 DFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVL 324
            +IGH+  V S++ +     +LS S D  +  W   S   L  +Q H+  V+
Sbjct: 303 TYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVI 354

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 58.7 bits (140), Expect = 3e-10
 Identities = 19/118 (16%), Positives = 37/118 (31%), Gaps = 7/118 (5%)

Query: 41  SMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SIET 99
           S  L  +  +  ++       +   NS       +     + S+  + +  YI   S + 
Sbjct: 271 SGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDR 330

Query: 100 KLHMWQISSGRLLATASSHYQPITIV------KWSADSNFIVTGGEDGTICVWQLSRL 151
            +  W   SG  L     H   +  V          + N   TG  D    +W+  ++
Sbjct: 331 GVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKKI 388

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 55.2 bits (131), Expect = 3e-09
 Identities = 53/345 (15%), Positives = 86/345 (24%), Gaps = 74/345 (21%)

Query: 7   VAFSYDGS-------GAISVWEPKGGTLLMSYKGASVLSPHSMCLL-------------- 45
           V FS DG            V+    G+L+      S  +     L               
Sbjct: 68  VKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSV 127

Query: 46  -----GNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIETK 100
                G     G E     I                          S D         T 
Sbjct: 128 CFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRT- 186

Query: 101 LHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFG 160
           + +W + +G+   T S      T+     D  +I  G  D  + VW        +     
Sbjct: 187 VRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVER---- 242

Query: 161 IPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDL 220
                      L       + H   V  V  ++ G    V S S DR+ K+++L    + 
Sbjct: 243 -----------LDSENESGTGHKDSVYSVVFTRDG--QSVVSGSLDRSVKLWNLQNANNK 289

Query: 221 LS-------------LILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQ 267
                          +     +  VA    ++ I  G+ +  +  +             +
Sbjct: 290 SDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFW-----------DKK 338

Query: 268 DSTSNPDFIGHEKQVTSL------SCSITGITLLSSSADETLKIW 306
                    GH   V S+      S         + S D   +IW
Sbjct: 339 SGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIW 383

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 49.8 bits (117), Expect = 2e-07
 Identities = 21/153 (13%), Positives = 42/153 (27%), Gaps = 39/153 (25%)

Query: 79  GRISSMQASPDAAYIAV-------------SIETKLHMWQISSGRLLATASSHYQPITIV 125
             + S+  + D   +               +   K      +SG    T   H   +  V
Sbjct: 255 DSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSV 314

Query: 126 KWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLP 185
             + +  +I++G +D  +  W                            PL +   H   
Sbjct: 315 ATTQNDEYILSGSKDRGVLFWDKKSG----------------------NPLLMLQGHRNS 352

Query: 186 VTHVTLSKLGAKS----RVASVSHDRTCKIFDL 214
           V  V ++   +        A+ S D   +I+  
Sbjct: 353 VISVAVANGSSLGPEYNVFATGSGDCKARIWKY 385

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 48.6 bits (114), Expect = 5e-07
 Identities = 41/274 (14%), Positives = 84/274 (30%), Gaps = 34/274 (12%)

Query: 7   VAFSYDGSGAIS-------VWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPM 59
           V FS DG    +                ++          +S+    +   L    G   
Sbjct: 127 VCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRT 186

Query: 60  IQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGRL------- 111
           ++ W + + + +    I  G  +   +  D  YIA  S++  + +W   +G L       
Sbjct: 187 VRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSE 246

Query: 112 LATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTG 171
             + + H   +  V ++ D   +V+G  D ++ +W L     K                 
Sbjct: 247 NESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNS--------- 297

Query: 172 LTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTR--- 228
                     H   V  V  ++      + S S DR    +D  +G  LL L        
Sbjct: 298 -GTCEVTYIGHKDFVLSVATTQND--EYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVI 354

Query: 229 ----LTCVAFDGTEDNIYMGTSEGVIKSFCLRQV 258
                   +     +    G+ +   + +  +++
Sbjct: 355 SVAVANGSSLGPEYNVFATGSGDCKARIWKYKKI 388

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 48.3 bits (113), Expect = 7e-07
 Identities = 42/243 (17%), Positives = 74/243 (30%), Gaps = 50/243 (20%)

Query: 118 HYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLH 177
           H   +  VK+S D  ++ TG  + T  V+++S           +   S            
Sbjct: 61  HTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVAR----LSDDSAANKDPENLNTS 115

Query: 178 VKSQHSLPVTHVTLSKLGAKSRVASVSH-------------------------------- 205
                 L +  V  S  G      +                                   
Sbjct: 116 SSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSG 175

Query: 206 --------DRTCKIFDLCTG-EDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLR 256
                   DRT +I+DL TG   L   I D   T     G    I  G+ +  ++ +   
Sbjct: 176 DKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDS- 234

Query: 257 QVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRT 316
               T     +  + N    GH+  V S+  +  G +++S S D ++K+W+  +      
Sbjct: 235 ---ETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSD 291

Query: 317 IQH 319
            + 
Sbjct: 292 SKT 294

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 59.9 bits (143), Expect = 8e-11
 Identities = 40/282 (14%), Positives = 70/282 (24%), Gaps = 20/282 (7%)

Query: 71  AQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSAD 130
             L     G    +  +P    I     T ++   + S       + H    T+ K S  
Sbjct: 10  PSLPRTARGTAVVLGNTPAGDKIQYCNGTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPS 69

Query: 131 SNFIVTGGEDGTICVWQLSRLICKQTVAF-GIPGSSGKGVTGLTEPLHVKSQHSLPVTHV 189
             +  +G   G + +W  ++             G                          
Sbjct: 70  GYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGH 129

Query: 190 TLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGV 249
                   S        R     D         +      T   F+G          E  
Sbjct: 130 VFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHT 189

Query: 250 IKSFCLRQVP-------------------RTRDHHIQDSTSNPDFIGHEKQVTSLSCSIT 290
                +R  P                               +   + H   V  L+ S  
Sbjct: 190 KFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPD 249

Query: 291 GITLLSSSADETLKIWHTISRQCLRTIQHKGPVLGAFLGLLP 332
           G  + S+SAD+T+KIW+  + +  +TI     +    LG++ 
Sbjct: 250 GTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIW 291

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 38.3 bits (87), Expect = 8e-04
 Identities = 15/97 (15%), Positives = 32/97 (32%), Gaps = 23/97 (23%)

Query: 118 HYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLH 177
           H   +  + WS D   I +   D TI +W ++ L  ++T                   + 
Sbjct: 237 HSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKT-------------------IP 277

Query: 178 VKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDL 214
           V ++       +  +    K  + S+S +      + 
Sbjct: 278 VGTRIEDQQLGIIWT----KQALVSISANGFINFVNP 310

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.4 bits (142), Expect = 1e-10
 Identities = 37/259 (14%), Positives = 69/259 (26%), Gaps = 13/259 (5%)

Query: 79  GRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATAS-----SHYQPITIVKWSADSNF 133
             + ++  S    ++    +  + +W IS     +  S     +    I   K   D   
Sbjct: 52  EVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCT 111

Query: 134 IVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSK 193
           ++ GGE  T+ +W L+    +          +   +    +     S  S     V    
Sbjct: 112 LIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLH 171

Query: 194 LGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVI--- 250
                R      D    I     G  L +  LD  +                +  +    
Sbjct: 172 NQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLG 231

Query: 251 -----KSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKI 305
                +   +       +    +         HE  V SL  +  G   +S+  D  L  
Sbjct: 232 YCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNA 291

Query: 306 WHTISRQCLRTIQHKGPVL 324
           W T     +   +    VL
Sbjct: 292 WRTPYGASIFQSKESSSVL 310

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.4 bits (129), Expect = 5e-09
 Identities = 13/67 (19%), Positives = 26/67 (38%), Gaps = 2/67 (2%)

Query: 83  SMQASPDAAYIA-VSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDG 141
           S++ +    +      +  L+ W+   G  +   S     +     S D  +IVTG  D 
Sbjct: 270 SLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQ-SKESSSVLSCDISVDDKYIVTGSGDK 328

Query: 142 TICVWQL 148
              V+++
Sbjct: 329 KATVYEV 335

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.5 bits (124), Expect = 3e-08
 Identities = 18/138 (13%), Positives = 43/138 (31%), Gaps = 25/138 (18%)

Query: 77  CPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVT 136
              +I S+   P   ++AV +E+        +         H   +  +K++    + V+
Sbjct: 223 FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVS 282

Query: 137 GGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGA 196
            G+D  +  W+                                S+ S  V    +S    
Sbjct: 283 TGKDNLLNAWRTPYGASIFQ-----------------------SKESSSVLSCDISVDD- 318

Query: 197 KSRVASVSHDRTCKIFDL 214
              + + S D+   ++++
Sbjct: 319 -KYIVTGSGDKKATVYEV 335

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.3 bits (100), Expect = 3e-05
 Identities = 19/111 (17%), Positives = 36/111 (32%), Gaps = 11/111 (9%)

Query: 63  WPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPI 122
             + S+      +   G++  +   PDA                   R + T + H + +
Sbjct: 5   GAMGSKPAYSFHVTADGQMQPVPFPPDALIGP---------GIPRHARQINTLN-HGEVV 54

Query: 123 TIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLT 173
             V  S  +  + TGG  G + VW +S    K  V+     +    +    
Sbjct: 55  CAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCK 104

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.3 bits (87), Expect = 9e-04
 Identities = 8/75 (10%), Positives = 18/75 (24%), Gaps = 2/75 (2%)

Query: 177 HVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDG 236
           +    H   V  +  +  G      S   D     +    G  +      + +       
Sbjct: 259 YQLHLHESCVLSLKFAYCG--KWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISV 316

Query: 237 TEDNIYMGTSEGVIK 251
            +  I  G+ +    
Sbjct: 317 DDKYIVTGSGDKKAT 331

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 58.7 bits (140), Expect = 3e-10
 Identities = 27/207 (13%), Positives = 57/207 (27%), Gaps = 26/207 (12%)

Query: 113 ATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGL 172
           A  S   +PI+   W+ D   I     +  + +++ S                       
Sbjct: 1   AYHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKS--------------------GNK 40

Query: 173 TEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCV 232
              +H   +H+  VT V  +     +R+ +   DR   ++ L       +L++       
Sbjct: 41  WVQVHELKEHNGQVTGVDWAPDS--NRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAA 98

Query: 233 AFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGI 292
                  N          +   +    +  D  +               V SL      +
Sbjct: 99  RCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVC----KHIKKPIRSTVLSLDWHPNSV 154

Query: 293 TLLSSSADETLKIWHTISRQCLRTIQH 319
            L + S D   +I+    ++       
Sbjct: 155 LLAAGSCDFKCRIFSAYIKEVEERPAP 181

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 55.2 bits (131), Expect = 3e-09
 Identities = 43/242 (17%), Positives = 74/242 (30%), Gaps = 13/242 (5%)

Query: 81  ISSMQASPDAAYIAV-SIETKLHMWQISSGR--LLATASSHYQPITIVKWSADSNFIVTG 137
           IS    + D   IA+     ++H+++ S  +   +     H   +T V W+ DSN IVT 
Sbjct: 10  ISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTC 69

Query: 138 GEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAK 197
           G D    VW L     K T+       + + V                V  +        
Sbjct: 70  GTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISI-------- 121

Query: 198 SRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQ 257
                 +    CK         +LSL        +A    +    + ++   IK    R 
Sbjct: 122 CYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAY--IKEVEERP 179

Query: 258 VPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTI 317
            P      +       +       V  +  S  G  +   S D T+ +     +  + T+
Sbjct: 180 APTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATL 239

Query: 318 QH 319
             
Sbjct: 240 AS 241

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 41.8 bits (96), Expect = 8e-05
 Identities = 16/185 (8%), Positives = 43/185 (23%), Gaps = 25/185 (13%)

Query: 40  HSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIET 99
           H +C   N   +        +     + +            + ++    +++ +A   + 
Sbjct: 205 HGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAGHDC 264

Query: 100 KLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAF 159
              ++   S     +                +        D                   
Sbjct: 265 FPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSE------------- 311

Query: 160 GIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLG--AKSRVASVSHDRTCKIFDLCTG 217
                             + S H   V+ +++   G    S+  +   D    I+D+ + 
Sbjct: 312 ----------GSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSL 361

Query: 218 EDLLS 222
           E  L 
Sbjct: 362 ESALK 366

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 38.7 bits (88), Expect = 8e-04
 Identities = 12/91 (13%), Positives = 29/91 (31%), Gaps = 9/91 (9%)

Query: 230 TCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSI 289
           +C A++     I +  +   +  +        + H ++          H  QVT +  + 
Sbjct: 11  SCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELK---------EHNGQVTGVDWAP 61

Query: 290 TGITLLSSSADETLKIWHTISRQCLRTIQHK 320
               +++   D    +W    R    T+   
Sbjct: 62  DSNRIVTCGTDRNAYVWTLKGRTWKPTLVIL 92

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 53.7 bits (127), Expect = 9e-09
 Identities = 25/282 (8%), Positives = 74/282 (26%), Gaps = 39/282 (13%)

Query: 81  ISSMQASPDAAYIAV-SIETKLHMWQISSGRL---LATASSHYQPITIVKWSADSNFIVT 136
           IS ++  P  + + + S +  L +++         L  +  +  P+    +  +++  + 
Sbjct: 14  ISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIY 73

Query: 137 GGEDGTICVWQLSRLICKQTVAFGIPGS--------------------------SGKGVT 170
            G      +                  +                            +   
Sbjct: 74  VGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYG 133

Query: 171 GLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDT--- 227
                +   + ++  V +   +     SR+    ++   + F L   ED    I ++   
Sbjct: 134 DGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLK 193

Query: 228 --RLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRT----RDHHIQDSTSNPDFIGHEKQ 281
                       ++     + +G +               +    +    N         
Sbjct: 194 YQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYP 253

Query: 282 VTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQHKGPV 323
           V S+  S     L ++ +D  +  W+  +R+ ++        
Sbjct: 254 VNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNED 295

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 42.9 bits (99), Expect = 3e-05
 Identities = 9/52 (17%), Positives = 25/52 (48%), Gaps = 4/52 (7%)

Query: 277 GHEKQVTSLSCSITGITLLSSSADETLKIWH----TISRQCLRTIQHKGPVL 324
             +  ++ +    +   LL +S D +L ++       +   L+++++K P+L
Sbjct: 9   APKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLL 60

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 41.4 bits (95), Expect = 9e-05
 Identities = 5/48 (10%), Positives = 19/48 (39%)

Query: 110 RLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTV 157
           +++    +    I+ +K     + ++    DG++ V++         +
Sbjct: 2   QIVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDL 49

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 40.6 bits (93), Expect = 2e-04
 Identities = 19/182 (10%), Positives = 48/182 (26%), Gaps = 20/182 (10%)

Query: 101 LHMWQISSGRLLATA----SSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQT 156
           +  +++                YQ   +     +         DG + V           
Sbjct: 172 VQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYN 231

Query: 157 VAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCT 216
            +        +     T   +  +       H  L          +   D     ++L T
Sbjct: 232 SSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLY---------TAGSDGIISCWNLQT 282

Query: 217 GEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHH-----IQDSTS 271
            + + +       + V    +++ + + TS+   K+     + +T + +     I     
Sbjct: 283 RKKIKNFAKFNEDSVVKIACSDNILCLATSDDTFKTN--AAIDQTIELNASSIYIIFDYE 340

Query: 272 NP 273
           NP
Sbjct: 341 NP 342

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 52.2 bits (123), Expect = 4e-08
 Identities = 26/230 (11%), Positives = 64/230 (27%), Gaps = 37/230 (16%)

Query: 114 TASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLT 173
              +H   I  V     ++F V+   DG + VW    L  +                   
Sbjct: 9   AGKAHDADIFSVSAC--NSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSH---------- 56

Query: 174 EPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTR----- 228
             +H    H + V             VA+ S       + +   ++   +I +       
Sbjct: 57  -FVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDS 115

Query: 229 ------LTCVAFDGTEDNIYM-----GTSEGVIKSFCL-------RQVPRTRDHHIQDST 270
                    + +  + D +          +G    +           +       ++   
Sbjct: 116 DMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQG 175

Query: 271 SNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQHK 320
           +    +   +  TS+  S  G+ + +   + T++I    + + L   + +
Sbjct: 176 TVESPMTPSQFATSVDISERGL-IATGFNNGTVQISELSTLRPLYNFESQ 224

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 42.5 bits (98), Expect = 4e-05
 Identities = 41/273 (15%), Positives = 84/273 (30%), Gaps = 36/273 (13%)

Query: 87  SPDAAYIA-VSIETKLHMWQISSGRLLAT----------ASSHYQPITIVKWSADSN--- 132
           + +   +A  S    L  ++I+                 +         +KW A ++   
Sbjct: 76  AFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLL 135

Query: 133 --FIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVT 190
              +V     GT  +W+      +          +      L   +      S   T V 
Sbjct: 136 SHRLVATDVKGTTYIWKFHPFADESNSLTL----NWSPTLELQGTVESPMTPSQFATSVD 191

Query: 191 LSKLGAKSRVASVSHDRTCKIFDLCTGEDLLS-------LILDTRLTCVAFDGTEDNIYM 243
           +S+ G    +A+  ++ T +I +L T   L +       +     +  V F      + +
Sbjct: 192 ISERG---LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAI 248

Query: 244 GTSEGVIK-----SFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSS 298
                             +   +       S ++     H   V SLS + +G TL S+ 
Sbjct: 249 AHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAG 308

Query: 299 ADETLKIWHTISRQCLRTIQ-HKGPVLGAFLGL 330
            D  L+ W   +++ + T+  H   +      L
Sbjct: 309 WDGKLRFWDVKTKERITTLNMHCDDIEIEEDIL 341

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.1 bits (115), Expect = 2e-07
 Identities = 47/299 (15%), Positives = 86/299 (28%), Gaps = 40/299 (13%)

Query: 10  SYDGSGAISVWEPKGGTLLMSYKG--ASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNS 67
             D +  I +W+           G   SVL       +              +    + +
Sbjct: 32  LRDNT--IKIWDKNTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLN 89

Query: 68  QEKAQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKW 127
                   +   R ++      +   ++++        I+  R+L    +          
Sbjct: 90  TLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNV-----V 144

Query: 128 SADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVT 187
             D  +IV+   D TI VW  S                        E +   + H   + 
Sbjct: 145 DFDDKYIVSASGDRTIKVWNTSTC----------------------EFVRTLNGHKRGIA 182

Query: 188 HVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSE 247
            +          V S S D T +++D+  G   L ++                I  G  +
Sbjct: 183 CLQYRD----RLVVSGSSDNTIRLWDIECGA-CLRVLEGHEELVRCIRFDNKRIVSGAYD 237

Query: 248 GVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIW 306
           G IK + L      R      +      + H  +V  L        ++SSS D+T+ IW
Sbjct: 238 GKIKVWDLVAALDPRAP--AGTLCLRTLVEHSGRVFRLQFD--EFQIVSSSHDDTILIW 292

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.3 bits (100), Expect = 2e-05
 Identities = 39/199 (19%), Positives = 71/199 (35%), Gaps = 20/199 (10%)

Query: 15  GAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLR 74
            +I+VW+    T +   +           +  +D  +    G   I+ W  ++ E  +  
Sbjct: 115 RSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTL 174

Query: 75  LICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFI 134
                 I+ +Q            +  + +W I  G  L     H + +  +++  D+  I
Sbjct: 175 NGHKRGIACLQYRDRLVVSGS-SDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRI 231

Query: 135 VTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKL 194
           V+G  DG I VW L   +  +  A              T  L    +HS  V  +   + 
Sbjct: 232 VSGAYDGKIKVWDLVAALDPRAPAG-------------TLCLRTLVEHSGRVFRLQFDE- 277

Query: 195 GAKSRVASVSHDRTCKIFD 213
               ++ S SHD T  I+D
Sbjct: 278 ---FQIVSSSHDDTILIWD 293

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.4 bits (95), Expect = 1e-04
 Identities = 22/146 (15%), Positives = 41/146 (28%), Gaps = 13/146 (8%)

Query: 9   FSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQ 68
            S  G   I VW       + +  G         CL   D ++        I+ W +   
Sbjct: 152 VSASGDRTIKVWNTSTCEFVRTLNGHK---RGIACLQYRDRLVVSGSSDNTIRLWDIECG 208

Query: 69  EKAQLRLICPGRISSMQASPDAAYIAVS--------IETKLHMWQISSGRLLATASSHYQ 120
              ++       +  ++                   +   L     +    L T   H  
Sbjct: 209 ACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSG 268

Query: 121 PITIVKWSADSNFIVTGGEDGTICVW 146
            +  +++  D   IV+   D TI +W
Sbjct: 269 RVFRLQF--DEFQIVSSSHDDTILIW 292

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.8 bits (91), Expect = 3e-04
 Identities = 15/49 (30%), Positives = 21/49 (42%), Gaps = 3/49 (6%)

Query: 277 GHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVL 324
              K V  L        ++S   D T+KIW   + +C R +  H G VL
Sbjct: 13  ETSKGVYCLQYD--DQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVL 59

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.1 bits (89), Expect = 5e-04
 Identities = 30/213 (14%), Positives = 61/213 (28%), Gaps = 5/213 (2%)

Query: 110 RLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGV 169
           + +   S   + +  +++  D   IV+G  D TI +W  + L CK+ +            
Sbjct: 6   QRIHCRSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY 63

Query: 170 TGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRL 229
                               T   L                   + T     S+ +    
Sbjct: 64  DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMA 123

Query: 230 TCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQ---DSTSNPDFIGHEKQVTSLS 286
           +          +    +  V+       V  + D  I+    ST       +  +     
Sbjct: 124 SPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIAC 183

Query: 287 CSITGITLLSSSADETLKIWHTISRQCLRTIQH 319
                  ++S S+D T+++W      CLR ++ 
Sbjct: 184 LQYRDRLVVSGSSDNTIRLWDIECGACLRVLEG 216

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

 Score = 48.6 bits (114), Expect = 4e-07
 Identities = 32/339 (9%), Positives = 87/339 (25%), Gaps = 35/339 (10%)

Query: 5   NEVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGN-DYVLGVEKGKPMIQAW 63
           +E     +    + V +    T+  S        P +  +  +      +      I   
Sbjct: 8   HEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGI 67

Query: 64  PVNSQE------KAQLRLICPGRISSMQASPDAAYIAVSIE-------------TKLHMW 104
            +++ +       + +       + S   SPD   +  ++               +L ++
Sbjct: 68  DLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVF 127

Query: 105 QISSGRLLATASSHYQP--ITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIP 162
             + G       +   P  + +++ + D +  V G +   + V   +             
Sbjct: 128 STADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVK--TGKYTVALPLRNWN 185

Query: 163 GSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLS 222
                    L    H   +H   + +        K   A+          DL TG+    
Sbjct: 186 RKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQ 245

Query: 223 LILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQV 282
              D          +  +        +            +   +  +         +   
Sbjct: 246 EFADLTELYFTGLRSPKDPNQ-----IYGVLNRLAKYDLKQRKLIKA------ANLDHTY 294

Query: 283 TSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQHKG 321
             ++    G  L        L +++  + + ++ I+  G
Sbjct: 295 YCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLPG 333

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.9 bits (112), Expect = 8e-07
 Identities = 30/226 (13%), Positives = 62/226 (27%), Gaps = 5/226 (2%)

Query: 104 WQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPG 163
           W+    +       H   +         N IV+G +D T+ VW      C +T+     G
Sbjct: 1   WRRGELKSPKVLKGHDDHVITC-LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGG 59

Query: 164 -SSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLS 222
             S +    +           +                ++V      +   +    D   
Sbjct: 60  VWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATL 119

Query: 223 LILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRT-RDHHIQDSTSNPDFIGHEKQ 281
            + D                +   +   +           +    +  T      GH  +
Sbjct: 120 RVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNR 179

Query: 282 VTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQHKGPVLGAF 327
           V   S    GI ++S S D ++++W   +  C+ T+     +    
Sbjct: 180 VY--SLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGM 223

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.2 bits (105), Expect = 5e-06
 Identities = 47/325 (14%), Positives = 97/325 (29%), Gaps = 61/325 (18%)

Query: 10  SYDGSGAISVWEPKGGTLLMSYKG-----ASVLSPHSMCLLGNDYVLGVEKGKPMIQAWP 64
           S D +  + VW    G  L +  G      S     ++ + G+             +   
Sbjct: 34  SDDNT--LKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIH 91

Query: 65  VNSQEKAQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPITI 124
                 + +R +       +  S DA      IET   +  +                 +
Sbjct: 92  TLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVL-----------MGHVAAV 140

Query: 125 VKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSL 184
                D   +V+G  D  + VW      C  T+                        H+ 
Sbjct: 141 RCVQYDGRRVVSGAYDFMVKVWDPETETCLHTL----------------------QGHTN 178

Query: 185 PVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMG 244
            V  +          V S S D + +++D+ TG  + +L     LT    +  ++ +  G
Sbjct: 179 RVYSLQFDG----IHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTS-GMELKDNILVSG 233

Query: 245 TSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLK 304
            ++  +K + ++     +     +   +                     +++SS D T+K
Sbjct: 234 NADSTVKIWDIKTGQCLQTLQGPNKHQSAVTC----------LQFNKNFVITSSDDGTVK 283

Query: 305 IWHTISRQCLRTI------QHKGPV 323
           +W   + + +R +         G V
Sbjct: 284 LWDLKTGEFIRNLVTLESGGSGGVV 308

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.4 bits (103), Expect = 1e-05
 Identities = 25/152 (16%), Positives = 45/152 (29%), Gaps = 12/152 (7%)

Query: 7   VAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVN 66
           V+ S D S  I VW+ + G  + +  G   L+   M L  N  V G       I      
Sbjct: 191 VSGSLDTS--IRVWDVETGNCIHTLTGHQSLT-SGMELKDNILVSGNADSTVKIWDIKTG 247

Query: 67  SQEKAQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLAT-----ASSHYQP 121
              +            +         I  S +  + +W + +G  +       +      
Sbjct: 248 QCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGV 307

Query: 122 ITIVKWSADSNFIVTGGEDGT----ICVWQLS 149
           +  ++ S        G  +GT    + V    
Sbjct: 308 VWRIRASNTKLVCAVGSRNGTEETKLLVLDFD 339

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.7 bits (96), Expect = 7e-05
 Identities = 35/212 (16%), Positives = 69/212 (32%), Gaps = 40/212 (18%)

Query: 101 LHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFG 160
           + +W   +   L T   H     +     D   +V+G  D +I VW +    C       
Sbjct: 159 VKVWDPETETCLHTLQGH--TNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNC------- 209

Query: 161 IPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDL 220
                          +H  + H    + + L      + + S + D T KI+D+ TG+ L
Sbjct: 210 ---------------IHTLTGHQSLTSGMELKD----NILVSGNADSTVKIWDIKTGQCL 250

Query: 221 LSLILDTRLT--CVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGH 278
            +L    +           ++ +   + +G +K + L+            +    +  G 
Sbjct: 251 QTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLK------TGEFIRNLVTLESGGS 304

Query: 279 EKQVTSLSCSITGITLLSSSADET----LKIW 306
              V  +  S T +     S + T    L + 
Sbjct: 305 GGVVWRIRASNTKLVCAVGSRNGTEETKLLVL 336

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.1 bits (84), Expect = 0.002
 Identities = 35/209 (16%), Positives = 65/209 (31%), Gaps = 28/209 (13%)

Query: 11  YDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEK 70
                 + VW+P+  T L + +G +    +S+   G   V G       I+ W V +   
Sbjct: 153 GAYDFMVKVWDPETETCLHTLQGHTN-RVYSLQFDGIHVVSGSLDTS--IRVWDVETGNC 209

Query: 71  AQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPI-TIVKWSA 129
                      S M+   +      +  T + +W I +G+ L T     +    +     
Sbjct: 210 IHTLTGHQSLTSGMELKDNILVSGNADST-VKIWDIKTGQCLQTLQGPNKHQSAVTCLQF 268

Query: 130 DSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHV 189
           + NF++T  +DGT+ +W L      + +                            V  +
Sbjct: 269 NKNFVITSSDDGTVKLWDLKTGEFIRNL-----------------VTLESGGSGGVVWRI 311

Query: 190 TLSKLGAKSRVASVSHDRT----CKIFDL 214
             S        A  S + T      + D 
Sbjct: 312 RASNTK--LVCAVGSRNGTEETKLLVLDF 338

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 47.3 bits (110), Expect = 1e-06
 Identities = 12/52 (23%), Positives = 20/52 (38%)

Query: 109 GRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFG 160
           G +      H + IT +  SAD   + +   +G I  W +S  I  +     
Sbjct: 2   GSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDV 53

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 44.2 bits (102), Expect = 1e-05
 Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 2/51 (3%)

Query: 277 GHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ--HKGPVLG 325
           GH K +T+LS S  G TL S+ A+  +  W   +    R     H   + G
Sbjct: 10  GHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITG 60

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 41.5 bits (95), Expect = 9e-05
 Identities = 10/61 (16%), Positives = 24/61 (39%), Gaps = 4/61 (6%)

Query: 92  YIAVSIETKLHMWQISSG---RLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQL 148
               S++  + +W ++      ++   +     +  V W  +   IV+ G+D  I  W +
Sbjct: 239 LATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWL-NETTIVSAGQDSNIKFWNV 297

Query: 149 S 149
            
Sbjct: 298 P 298

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

 Score = 46.0 bits (107), Expect = 3e-06
 Identities = 20/159 (12%), Positives = 39/159 (24%), Gaps = 36/159 (22%)

Query: 78  PGRISSMQASPDAAYIAVS--------IETKLHMWQISSGRLLATASSHYQPITIVKWSA 129
           PG  +  +  P +                +          R++    S     ++     
Sbjct: 227 PGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGE 286

Query: 130 DSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHV 189
            + +     E G +  + +                  + VT +             +T +
Sbjct: 287 FAAYYQGAPEKGVLLKYDVK----------------TRKVTEVKNN----------LTDL 320

Query: 190 TLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTR 228
            LS       V     D     F L   ED  ++  D R
Sbjct: 321 RLSADR--KTVMVRKDDGKIYTFPLEKPEDERTVETDKR 357

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

 Score = 41.4 bits (95), Expect = 1e-04
 Identities = 22/322 (6%), Positives = 61/322 (18%), Gaps = 38/322 (11%)

Query: 7   VAFSYDGSGAISVWEPKGGTLLMSYKGA--------SVLSPHSMCLLGNDYVLGVEKGKP 58
                     + +++ + G      +                ++       ++ V+    
Sbjct: 58  FIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETG 117

Query: 59  MIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSH 118
                  + +       I           P           +        GR +  A++ 
Sbjct: 118 KPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTE 177

Query: 119 YQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHV 178
                   + ADS  +                                     +     V
Sbjct: 178 NSHDYAPAFDADSKNLYYLSYRSLDPSPDRV---------------VLNFSFEVVSKPFV 222

Query: 179 KSQHSLPVTHVTLSKLGAKSRVASVSHDRT---CKIFDLCTGEDLLSLILDTRLTCVAFD 235
                       L      S       +         ++  G+  + + L++ +   +  
Sbjct: 223 IPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVP 282

Query: 236 GTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLL 295
              +                                       +  +T L  S    T++
Sbjct: 283 VHGEFAAYYQGAPEKGVLLKY------------DVKTRKVTEVKNNLTDLRLSADRKTVM 330

Query: 296 SSSADETLKIWHTISRQCLRTI 317
               D  +  +     +  RT+
Sbjct: 331 VRKDDGKIYTFPLEKPEDERTV 352

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

 Score = 38.3 bits (87), Expect = 0.001
 Identities = 24/241 (9%), Positives = 52/241 (21%), Gaps = 31/241 (12%)

Query: 87  SP-DAAYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDG--TI 143
           SP D   IA     +  +  +S   +L         I  V+   D+      G      +
Sbjct: 11  SPLDGDLIAFVSRGQAFIQDVSGTYVLKVP--EPLRIRYVRRGGDTKVAFIHGTREGDFL 68

Query: 144 CVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASV 203
            ++                          T       ++   V  + + + G  + VA+ 
Sbjct: 69  GIYDYR-----------------------TGKAEKFEENLGNVFAMGVDRNGKFAVVAND 105

Query: 204 SHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRD 263
             +      +      +              D +    Y    +       + Q     D
Sbjct: 106 RFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYD 165

Query: 264 HHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQHKGPV 323
              +                + +       L   S          +       +  K  V
Sbjct: 166 MEGRKIF---AATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFV 222

Query: 324 L 324
           +
Sbjct: 223 I 223

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 44.9 bits (104), Expect = 6e-06
 Identities = 10/74 (13%), Positives = 23/74 (31%), Gaps = 2/74 (2%)

Query: 77  CPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLL-ATASSHYQPITIVKWSADSNFIV 135
                +          +    E + +++ + SG+L+ A        I  V +      + 
Sbjct: 281 HTNLSAITTFYVSDNILVSGSENQFNIYNLRSGKLVHANILKDADQIWSVNFKGK-TLVA 339

Query: 136 TGGEDGTICVWQLS 149
              +DG   +  L 
Sbjct: 340 AVEKDGQSFLEILD 353

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 40.6 bits (93), Expect = 2e-04
 Identities = 9/50 (18%), Positives = 24/50 (48%), Gaps = 2/50 (4%)

Query: 277 GHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVLG 325
           GH   V +         +++ + D+ ++++ +I+++ L  +  H G V  
Sbjct: 10  GHMTSVIT-CLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWA 58

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 36.8 bits (83), Expect = 0.003
 Identities = 29/319 (9%), Positives = 86/319 (26%), Gaps = 24/319 (7%)

Query: 10  SYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVL--GVEKGKPMIQAWPVNS 67
           + D    I V++      L+   G       ++       ++    ++   +        
Sbjct: 30  ADDKM--IRVYDSINKKFLLQLSGHD-GGVWALKYAHGGILVSGSTDRTVRVWDIKKGCC 86

Query: 68  QEKAQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKW 127
               +        +  ++       +  S +  LH+W++     +      +    +   
Sbjct: 87  THVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHT 146

Query: 128 SADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVT 187
             ++ + V         V  +        +       +   V  + +   +         
Sbjct: 147 PEENPYFVGVLRGHMASVRTV---SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDR 203

Query: 188 HVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSE 247
             +      + R  S S D T +I+DL  GE                   + +  +    
Sbjct: 204 IYSTIYDHERKRCISASMDTTIRIWDLENGEL--------------MYTLQGHTALVGLL 249

Query: 248 GVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWH 307
            +   F +             +  +  F  H   +++++       +L S ++    I++
Sbjct: 250 RLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGSENQFNIYN 309

Query: 308 TISRQCLRTI--QHKGPVL 324
             S + +     +    + 
Sbjct: 310 LRSGKLVHANILKDADQIW 328

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 44.0 bits (102), Expect = 2e-05
 Identities = 31/296 (10%), Positives = 75/296 (25%), Gaps = 27/296 (9%)

Query: 49  YVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIET--------- 99
           YV        + Q + ++ +    + +I  G + +   + D ++IA +            
Sbjct: 17  YVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLPNPVVADDGSFIAHASTVFSRIARGER 76

Query: 100 --KLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTV 157
              + ++   +    A       P  +V             +  T+  +Q S        
Sbjct: 77  TDYVEVFDPVTLLPTADIELPDAPRFLVGT--YPWMTSLTPDGKTLLFYQFSP----APA 130

Query: 158 AFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTG 217
              +          L  P       + P T     + G+ ++VA    + T +I      
Sbjct: 131 VGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAF-GTEGTPEITHTEVF 189

Query: 218 EDLLSLILDT--------RLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDS 269
                 +++         RL    + G    I + + +              R    +  
Sbjct: 190 HPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPG 249

Query: 270 TSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQHKGPVLG 325
                   H                   +A   + +    + + L   +    +  
Sbjct: 250 GWQQ-VAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEIDS 304

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 39.4 bits (90), Expect = 5e-04
 Identities = 20/144 (13%), Positives = 40/144 (27%), Gaps = 5/144 (3%)

Query: 82  SSMQASPDAAYIAVSIETKLHMWQISSGRL--LATASSHYQPITIVKWSADSNFIVTGGE 139
               +      +  +   K+H   +SSG    L    +  +      W       V    
Sbjct: 199 HPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHR 258

Query: 140 DGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSR 199
                      +  +              +   T     K +    +  + +S+      
Sbjct: 259 ALDRIYL---LVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEIDSINVSQDEKPLL 315

Query: 200 VASVSHDRTCKIFDLCTGEDLLSL 223
            A  + D+T  I D  +GE+L S+
Sbjct: 316 YALSTGDKTLYIHDAESGEELRSV 339

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 39.4 bits (90), Expect = 5e-04
 Identities = 35/329 (10%), Positives = 75/329 (22%), Gaps = 75/329 (22%)

Query: 10  SYDGSGAISVWEPKGGTLL------MSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAW 63
             + +  + V++P             + +      P    L  +   L   +  P     
Sbjct: 73  RGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVG 132

Query: 64  PVNSQEKAQLRLI---------CPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLAT 114
            V+ + KA  R++              +      D +   V+  T+              
Sbjct: 133 VVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEIT---HTEVF 189

Query: 115 ASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTE 174
                  I    +S  +  +V     G I    LS                    +G  +
Sbjct: 190 HPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLS--------------------SGDAK 229

Query: 175 PLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAF 234
            L      +               +  +           +   ++               
Sbjct: 230 FLPAVEALTEAERADGWRP--GGWQQVAYHRALDRIYLLVDQRDEWRH----------KT 277

Query: 235 DGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITL 294
                 +    +   +                              ++ S++ S     L
Sbjct: 278 ASRFVVVLDAKTGERLAK-----------------------FEMGHEIDSINVSQDEKPL 314

Query: 295 L--SSSADETLKIWHTISRQCLRTIQHKG 321
           L   S+ D+TL I    S + LR++   G
Sbjct: 315 LYALSTGDKTLYIHDAESGEELRSVNQLG 343

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 43.0 bits (99), Expect = 3e-05
 Identities = 31/309 (10%), Positives = 73/309 (23%), Gaps = 74/309 (23%)

Query: 79  GRISSMQASPDAAYIAVSI--ETKLHMWQISSGRLLATAS---SHYQPITIVKWS--ADS 131
              + +   P    IA        +        ++             +T VK+S    S
Sbjct: 18  NFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGS 77

Query: 132 NFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTL 191
            ++ +G E G + VW  +      +V                         + P++ ++ 
Sbjct: 78  QYLCSGDESGKVIVWGWTFDKESNSVEV--------------NVKSEFQVLAGPISDISW 123

Query: 192 SKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIK 251
              G +  V     D         +G           ++  +      ++        + 
Sbjct: 124 DFEGRRLCVVGEGRDNFGVFISWDSGNS------LGEVSGHSQRINACHLKQSRPMRSMT 177

Query: 252 SFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSIT--------------------- 290
                 V   +    + S S+         V  +  S                       
Sbjct: 178 VGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKS 237

Query: 291 -------------------------GITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVL 324
                                         +  AD T+++W   + +C++     K  + 
Sbjct: 238 GEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLG 297

Query: 325 GAFLGLLPP 333
              +G++  
Sbjct: 298 NQQVGVVAT 306

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 39.1 bits (89), Expect = 6e-04
 Identities = 21/97 (21%), Positives = 29/97 (29%), Gaps = 21/97 (21%)

Query: 118 HYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLH 177
             Q         DS    T G D TI VW ++   C Q                      
Sbjct: 250 PVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLD----------------- 292

Query: 178 VKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDL 214
              +  L    V +   G   R+ S+S D T   ++L
Sbjct: 293 ---KQQLGNQQVGVVATG-NGRIISLSLDGTLNFYEL 325

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 42.9 bits (99), Expect = 3e-05
 Identities = 19/151 (12%), Positives = 43/151 (28%), Gaps = 3/151 (1%)

Query: 20  WEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPG 79
            +P    +   ++ + V++        +         +  +    + + E A   +    
Sbjct: 181 AQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMD 240

Query: 80  RISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGE 139
                 A   A   A      L  + +     +            V  S D + +  GG 
Sbjct: 241 VFYFSTAVNPAKTRAFGAYNVLESFDLEKNASIKRVP-LPHSYYSVNVSTDGSTVWLGGA 299

Query: 140 DGTICVWQLSRLICKQTVAFGIPGSSGKGVT 170
            G +  +    L  K  V   +PG++   + 
Sbjct: 300 LGDLAAYDAETLEKKGQVD--LPGNASMSLA 328

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} Length = 301

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

 Score = 39.5 bits (90), Expect = 4e-04
 Identities = 11/60 (18%), Positives = 19/60 (31%), Gaps = 2/60 (3%)

Query: 102 HMWQISSGRLLATASSHYQPITIVKWSADSNFI-VTGGEDGTICVWQLSRLICKQTVAFG 160
            M    + ++ A       P  I   + D   + V      T+ V   +      T+A G
Sbjct: 227 SMIDTGTNKITARIPVGPDPAGIA-VTPDGKKVYVALSFCNTVSVIDTATNTITATMAVG 285

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} Length = 301

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

 Score = 38.3 bits (87), Expect = 0.001
 Identities = 13/66 (19%), Positives = 24/66 (36%), Gaps = 2/66 (3%)

Query: 91  AYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFI-VTGGEDGTICVWQLS 149
           AYIA S    + +  ++S ++ AT      P+  V  S D   + V       + +   +
Sbjct: 4   AYIANSESDNISVIDVTSNKVTATIPVGSNPMGAV-ISPDGTKVYVANAHSNDVSIIDTA 62

Query: 150 RLICKQ 155
                 
Sbjct: 63  TNNVIA 68

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} Length = 301

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

 Score = 37.5 bits (85), Expect = 0.002
 Identities = 13/83 (15%), Positives = 27/83 (32%), Gaps = 3/83 (3%)

Query: 253 FCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLL-SSSADETLKIWHTISR 311
             + +   T       +      I        ++ +  G  +  + S   T+ +  T + 
Sbjct: 217 TNVDKYFNTVSMIDTGTNKITARIPVGPDPAGIAVTPDGKKVYVALSFCNTVSVIDTATN 276

Query: 312 QCLRTIQ-HKGPV-LGAFLGLLP 332
               T+   K P   G F+G +P
Sbjct: 277 TITATMAVGKNPYASGQFIGSIP 299

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 38.4 bits (87), Expect = 7e-04
 Identities = 11/96 (11%), Positives = 26/96 (27%), Gaps = 24/96 (25%)

Query: 118 HYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLH 177
                   +   + + + TG  D  I ++ + R                       + + 
Sbjct: 214 KPAEKGANEEEIEEDLVATGSLDTNIFIYSVKR---------------------PMKIIK 252

Query: 178 VKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFD 213
             + H   V ++        S + S   D   K ++
Sbjct: 253 ALNAHKDGVNNLLWET---PSTLVSSGADACIKRWN 285

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 36.9 bits (83), Expect = 0.002
 Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 4/42 (9%)

Query: 108 SGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLS 149
              +L T S H + IT +  +     +++G  DG I  W  S
Sbjct: 2   HDEVLKTISGHNKGITALTVNP----LISGSYDGRIMEWSSS 39

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 368

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 38.4 bits (88), Expect = 8e-04
 Identities = 34/342 (9%), Positives = 78/342 (22%), Gaps = 52/342 (15%)

Query: 10  SYDGSGAISVWEPKGGTLL----MSYKGASVLSP-HSMCLLGNDYVLGVEKGKP--MIQA 62
            + G+    V     G  L     ++   +V     S   L +       KGK    ++ 
Sbjct: 41  YFAGTTENWVSCAGCGVTLGHSLGAFLSLAVAGHSGSDFALASTSFARSAKGKRTDYVEV 100

Query: 63  WPVNSQEKAQ-------LRLICPGRISSMQASPDAAYIAVSIETK--LHMWQISSGRLLA 113
           +   +             R     R+  +     +A +   +          +       
Sbjct: 101 FDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQ 160

Query: 114 T-------ASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLS---RLICKQTVAFGIPG 163
                           T    S  ++   +           +          +       
Sbjct: 161 LTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQAN 220

Query: 164 SSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSL 223
             G  V  +   +      +   T           R A               G  +++ 
Sbjct: 221 YPGMLVWAVASSILQGDIPAAGATMKAAIDGNESGRKADNFRS---------AGFQMVAK 271

Query: 224 ILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVT 283
           + +T    +       +           +  + Q                  I +     
Sbjct: 272 LKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGP--------------ISNGHDSD 317

Query: 284 SLSCSITGITLL--SSSADETLKIWHTISRQCLRTIQ-HKGP 322
           ++  +  G +    +S+  E L I+   S Q   +++  KGP
Sbjct: 318 AIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDKGP 359

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	343
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	100.0
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	100.0
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	100.0
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	100.0
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	100.0
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	100.0
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	100.0
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	100.0
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	100.0
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	100.0
d1tbga_	340	beta1-subunit of the signal-transducing G protein	100.0
d1tbga_	340	beta1-subunit of the signal-transducing G protein	100.0
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	100.0
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	100.0
d1nexb2	355	Cdc4 propeller domain {Baker's yeast (Saccharomyce	100.0
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	100.0
d2ovrb2	342	F-box/WD repeat-containing protein 7, FBXW7 {Human	100.0
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	100.0
d1nexb2	355	Cdc4 propeller domain {Baker's yeast (Saccharomyce	100.0
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	100.0
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	100.0
d1p22a2	293	F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom	100.0
d1pgua2	287	Actin interacting protein 1 {Baker's yeast (Saccha	100.0
d1pgua2	287	Actin interacting protein 1 {Baker's yeast (Saccha	100.0
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	100.0
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	100.0
d1p22a2	293	F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom	100.0
d1hzua2	426	C-terminal (heme d1) domain of cytochrome cd1-nitr	100.0
d2ovrb2	342	F-box/WD repeat-containing protein 7, FBXW7 {Human	100.0
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	100.0
d1qksa2	432	C-terminal (heme d1) domain of cytochrome cd1-nitr	100.0
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	100.0
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	99.97
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	99.97
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	99.96
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	99.95
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	99.94
d1hzua2	426	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.94
d2madh_	373	Methylamine dehydrogenase, H-chain {Gram negative	99.94
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	99.94
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	99.93
d1qksa2	432	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.93
d2bbkh_	355	Methylamine dehydrogenase, H-chain {Paracoccus den	99.91
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	99.9
d2madh_	373	Methylamine dehydrogenase, H-chain {Gram negative	99.88
d1mdah_	368	Methylamine dehydrogenase, H-chain {Paracoccus den	99.86
d1qnia2	441	Nitrous oxide reductase, N-terminal domain {Pseudo	99.86
d2bbkh_	355	Methylamine dehydrogenase, H-chain {Paracoccus den	99.84
d2bgra1	470	Dipeptidyl peptidase IV/CD26, N-terminal domain {P	99.8
d1mdah_	368	Methylamine dehydrogenase, H-chain {Paracoccus den	99.71
d2bgra1	470	Dipeptidyl peptidase IV/CD26, N-terminal domain {P	99.68
d1jofa_	365	3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu	99.6
d2hqsa1	269	TolB, C-terminal domain {Escherichia coli [TaxId:	99.59
d1xfda1	465	Dipeptidyl aminopeptidase-like protein 6, DPP6, N-	99.59
d1qnia2	441	Nitrous oxide reductase, N-terminal domain {Pseudo	99.58
d2p4oa1	302	Hypothetical protein All0351 homologue {Nostoc pun	99.56
d2hqsa1	269	TolB, C-terminal domain {Escherichia coli [TaxId:	99.53
d2p4oa1	302	Hypothetical protein All0351 homologue {Nostoc pun	99.52
d1rwia_	260	Serine/threonine-protein kinase PknD {Mycobacteriu	99.5
d1jofa_	365	3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu	99.5
d1pjxa_	314	Diisopropylfluorophosphatase (phosphotriesterase,	99.46
d1rwia_	260	Serine/threonine-protein kinase PknD {Mycobacteriu	99.46
d1q7fa_	279	Brain tumor cg10719-pa {Fruit fly (Drosophila mela	99.46
d2dg1a1	319	Lactonase Drp35 {Staphylococcus aureus [TaxId: 128	99.41
d1q7fa_	279	Brain tumor cg10719-pa {Fruit fly (Drosophila mela	99.4
d1pjxa_	314	Diisopropylfluorophosphatase (phosphotriesterase,	99.39
d2dg1a1	319	Lactonase Drp35 {Staphylococcus aureus [TaxId: 128	99.38
d1xfda1	465	Dipeptidyl aminopeptidase-like protein 6, DPP6, N-	99.19
d2ghsa1	295	Regucalcin {Agrobacterium tumefaciens [TaxId: 358]	99.18
d2ghsa1	295	Regucalcin {Agrobacterium tumefaciens [TaxId: 358]	99.14
d1k32a2	281	Tricorn protease N-terminal domain {Archaeon Therm	99.01
d1fwxa2	459	Nitrous oxide reductase, N-terminal domain {Paraco	98.9
d2ad6a1	571	Methanol dehydrogenase, heavy chain {Methylophilus	98.77
d1k32a2	281	Tricorn protease N-terminal domain {Archaeon Therm	98.74
d1w6sa_	596	Methanol dehydrogenase, heavy chain {Methylobacter	98.69
d1kb0a2	573	Quinoprotein alcohol dehydrogenase, N-terminal dom	98.65
d1kv9a2	560	Quinoprotein alcohol dehydrogenase, N-terminal dom	98.59
d1utca2	327	Clathrin heavy-chain terminal domain {Rat (Rattus	98.41
d1flga_	582	Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax	98.41
d1utca2	327	Clathrin heavy-chain terminal domain {Rat (Rattus	98.37
d1npea_	263	Nidogen {Mouse (Mus musculus) [TaxId: 10090]}	98.34
d2ad6a1	571	Methanol dehydrogenase, heavy chain {Methylophilus	98.32
d1fwxa2	459	Nitrous oxide reductase, N-terminal domain {Paraco	98.29
d1kv9a2	560	Quinoprotein alcohol dehydrogenase, N-terminal dom	98.2
d1k3ia3	387	Galactose oxidase, central domain {Fungi (Fusarium	98.12
d1ijqa1	266	Low density lipoprotein (LDL) receptor {Human (Hom	98.07
d1kb0a2	573	Quinoprotein alcohol dehydrogenase, N-terminal dom	98.03
d1npea_	263	Nidogen {Mouse (Mus musculus) [TaxId: 10090]}	98.0
d1k3ia3	387	Galactose oxidase, central domain {Fungi (Fusarium	97.96
d1w6sa_	596	Methanol dehydrogenase, heavy chain {Methylobacter	97.96
d1v04a_	340	Serum paraoxonase/arylesterase 1, PON1 {Rabit (Ory	97.85
d1h6la_	353	Thermostable phytase (3-phytase) {Bacillus amyloli	97.83
d1qfma1	430	Prolyl oligopeptidase, N-terminal domain {Pig (Sus	97.33
d1qfma1	430	Prolyl oligopeptidase, N-terminal domain {Pig (Sus	97.26
d1ijqa1	266	Low density lipoprotein (LDL) receptor {Human (Hom	97.14
d1v04a_	340	Serum paraoxonase/arylesterase 1, PON1 {Rabit (Ory	97.01
d1flga_	582	Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax	96.97
d1h6la_	353	Thermostable phytase (3-phytase) {Bacillus amyloli	96.33
d1crua_	450	Soluble quinoprotein glucose dehydrogenase {Acinet	95.86
d1xipa_	381	Nucleoporin NUP159 {Baker's yeast (Saccharomyces c	95.42
d1xipa_	381	Nucleoporin NUP159 {Baker's yeast (Saccharomyces c	95.03
d1zgka1	288	Kelch-like ECH-associated protein 1, KEAP1 {Human	94.76
d2hu7a1	313	Acylamino-acid-releasing enzyme, N-terminal donain	93.48
d1zgka1	288	Kelch-like ECH-associated protein 1, KEAP1 {Human	92.43
d1crua_	450	Soluble quinoprotein glucose dehydrogenase {Acinet	91.24
d1suua_	304	DNA gyrase A C-terminal domain {Lyme disease spiro	87.79
d1wp5a_	323	Topoisomerase IV subunit A, ParC, C-terminal domai	82.86
d1jtdb_	273	beta-lactamase inhibitor protein-II, BLIP-II {Stre	80.67
d2hu7a1	313	Acylamino-acid-releasing enzyme, N-terminal donain	80.15

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.3e-47  Score=309.77  Aligned_cols=277  Identities=17%  Similarity=0.210  Sum_probs=244.7

Q ss_pred             eEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccc-----eecccCCcceEEEEECCCCCEEEE-ecCC
Q psy10867         26 TLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKA-----QLRLICPGRISSMQASPDAAYIAV-SIET   99 (343)
Q Consensus        26 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~-----~~~~~~~~~v~~~~~s~~~~~l~~-~~d~   99 (343)
                      +.+.++ .|.. .|.+++|+|++++|++|++ |.|+|||+.+....     .....|.+.|.+++|+|++++|++ +.|+
T Consensus        43 ~~~~~~-~H~~-~V~~v~fs~~g~~latg~d-g~V~iWd~~~~~~~~~~~~~~~~~h~~~I~~v~~s~dg~~l~s~~~dg  119 (337)
T d1gxra_          43 RQINTL-NHGE-VVCAVTISNPTRHVYTGGK-GCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEAS  119 (337)
T ss_dssp             EEEEEE-CCSS-CCCEEEECSSSSEEEEECB-SEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSS
T ss_pred             eEEEEC-CCCC-cEEEEEECCCCCEEEEEEC-CEEEEEEccCCcccceeEEeeecCCCCcEEEEEEcCCCCEEEEeeccc
Confidence            344555 6777 9999999999999999985 99999999875433     123478889999999999999987 6899


Q ss_pred             eEEEEEccCC--ceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceee
Q psy10867        100 KLHMWQISSG--RLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLH  177 (343)
Q Consensus       100 ~i~v~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (343)
                      .|++||+...  +....+..|...+.+++|+|++.++++++.|+.|++|++.+.+                      ...
T Consensus       120 ~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~~~~~~~----------------------~~~  177 (337)
T d1gxra_         120 TLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT----------------------LVR  177 (337)
T ss_dssp             EEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE----------------------EEE
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccccc----------------------ccc
Confidence            9999998754  4566778899999999999999999999999999999998864                      444


Q ss_pred             eecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeec
Q psy10867        178 VKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQ  257 (343)
Q Consensus       178 ~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~  257 (343)
                      ....|...|.+++|++++  ..+++++.|+.+++||+++++.+..+.+...|.+++|+|++++|++++.|+.+++||++.
T Consensus       178 ~~~~~~~~v~~l~~s~~~--~~~~~~~~d~~v~i~d~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~i~d~~~  255 (337)
T d1gxra_         178 QFQGHTDGASCIDISNDG--TKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNK  255 (337)
T ss_dssp             EECCCSSCEEEEEECTTS--SEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTS
T ss_pred             cccccccccccccccccc--cccccccccccccccccccceeecccccccceEEEEEcccccccceeccccccccccccc
Confidence            556789999999999998  799999999999999999999999999999999999999999999999999999999986


Q ss_pred             ccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecccCCceEEEEEccCCCeeee
Q psy10867        258 VPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQHKGPVLGAFLGLLPPAIHD  337 (343)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~  337 (343)
                      ...            .....|...|++++|+|++++|++++.||.|++||+.+++.+..+.|.+.|.+++|+|++++|++
T Consensus       256 ~~~------------~~~~~~~~~i~~v~~s~~g~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~s~d~~~l~t  323 (337)
T d1gxra_         256 PDK------------YQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVT  323 (337)
T ss_dssp             SCE------------EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEE
T ss_pred             ccc------------ccccccccccceEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEccCCCCEEEEEEeCCCCEEEE
Confidence            543            23457889999999999999999999999999999999999999889999999999999999999


Q ss_pred             cccC
Q psy10867        338 YDFT  341 (343)
Q Consensus       338 ~~~~  341 (343)
                      ++..
T Consensus       324 ~s~D  327 (337)
T d1gxra_         324 GSGD  327 (337)
T ss_dssp             EETT
T ss_pred             EeCC
Confidence            8754

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5e-45  Score=298.00  Aligned_cols=269  Identities=13%  Similarity=0.169  Sum_probs=233.3

Q ss_pred             cccceEEEecCC-------CCeEEEEecCCceE-----EEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcc
Q psy10867          2 SLLNEVAFSYDG-------SGAISVWEPKGGTL-----LMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQE   69 (343)
Q Consensus         2 ~~v~~~~~s~~~-------dg~i~iwd~~~~~~-----~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~   69 (343)
                      .+|.++.|++++       ||.|+|||+.+++.     .....+|.. .|.+++|+|++.++++++.||.|++||+....
T Consensus        52 ~~V~~v~fs~~g~~latg~dg~V~iWd~~~~~~~~~~~~~~~~~h~~-~I~~v~~s~dg~~l~s~~~dg~i~iwd~~~~~  130 (337)
T d1gxra_          52 EVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDN-YIRSCKLLPDGCTLIVGGEASTLSIWDLAAPT  130 (337)
T ss_dssp             SCCCEEEECSSSSEEEEECBSEEEEEETTSTTCCSCSEEEECSCTTS-BEEEEEECTTSSEEEEEESSSEEEEEECCCC-
T ss_pred             CcEEEEEECCCCCEEEEEECCEEEEEEccCCcccceeEEeeecCCCC-cEEEEEEcCCCCEEEEeecccccccccccccc
Confidence            356777777766       79999999976432     233456787 99999999999999999888999999987544


Q ss_pred             --cceecccCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEe
Q psy10867         70 --KAQLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVW  146 (343)
Q Consensus        70 --~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw  146 (343)
                        ....+..|...+..++|+|++.++++ +.++.|++|++.++++......|...|.+++|++++..+++++.|+.+++|
T Consensus       131 ~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~~~~~~~d~~v~i~  210 (337)
T d1gxra_         131 PRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSW  210 (337)
T ss_dssp             -EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence              34556688899999999999999987 678999999999999999999999999999999999999999999999999


Q ss_pred             ecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecC
Q psy10867        147 QLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILD  226 (343)
Q Consensus       147 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~  226 (343)
                      |+++++....                       ..|...|.+++|+|++  .++++++.|+.+++||+++++......+.
T Consensus       211 d~~~~~~~~~-----------------------~~~~~~i~~l~~~~~~--~~l~~~~~d~~i~i~d~~~~~~~~~~~~~  265 (337)
T d1gxra_         211 DLREGRQLQQ-----------------------HDFTSQIFSLGYCPTG--EWLAVGMESSNVEVLHVNKPDKYQLHLHE  265 (337)
T ss_dssp             ETTTTEEEEE-----------------------EECSSCEEEEEECTTS--SEEEEEETTSCEEEEETTSSCEEEECCCS
T ss_pred             ccccceeecc-----------------------cccccceEEEEEcccc--cccceeccccccccccccccccccccccc
Confidence            9998754332                       2478899999999998  89999999999999999999988877789


Q ss_pred             CcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEE
Q psy10867        227 TRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIW  306 (343)
Q Consensus       227 ~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw  306 (343)
                      ..|.+++|+|++++|++++.||.|++||+.......            ...|...|++++|+|++++|++|+.||.|+||
T Consensus       266 ~~i~~v~~s~~g~~l~s~s~Dg~i~iwd~~~~~~~~------------~~~~~~~v~~~~~s~d~~~l~t~s~D~~I~vW  333 (337)
T d1gxra_         266 SCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIF------------QSKESSSVLSCDISVDDKYIVTGSGDKKATVY  333 (337)
T ss_dssp             SCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE------------EEECSSCEEEEEECTTSCEEEEEETTSCEEEE
T ss_pred             cccceEEECCCCCEEEEEeCCCeEEEEECCCCCEEE------------EccCCCCEEEEEEeCCCCEEEEEeCCCeEEEE
Confidence            999999999999999999999999999988754422            23578899999999999999999999999999


Q ss_pred             ec
Q psy10867        307 HT  308 (343)
Q Consensus       307 d~  308 (343)
                      |+
T Consensus       334 dl  335 (337)
T d1gxra_         334 EV  335 (337)
T ss_dssp             EE
T ss_pred             EE
Confidence            96

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=5.2e-45  Score=293.88  Aligned_cols=276  Identities=16%  Similarity=0.155  Sum_probs=232.6

Q ss_pred             cceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCCce--EEE
Q psy10867         38 SPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGRL--LAT  114 (343)
Q Consensus        38 ~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~--~~~  114 (343)
                      .+..++++|+|..++.+.+ +.+.+|++++.+..+.+.+|...|++++|+|+|++|++ +.||.|++||+.+++.  ...
T Consensus        19 ~~~~~a~~~~g~~l~~~~~-~~v~i~~~~~~~~~~~~~~H~~~v~~~~~sp~g~~latg~~dg~i~iwd~~~~~~~~~~~   97 (311)
T d1nr0a1          19 TAVVLGNTPAGDKIQYCNG-TSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTT   97 (311)
T ss_dssp             CCCCCEECTTSSEEEEEET-TEEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEE
T ss_pred             CeEEEEEcCCCCEEEEEeC-CEEEEEECCCCceeEEEcCCCCCEEEEEEeCCCCeEeccccCceEeeeeeeccccccccc
Confidence            5678899999988888876 78999999999888888899999999999999999997 6899999999988754  356


Q ss_pred             ecccCCCeEEEEEecCCCEEEEecC--CCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEee
Q psy10867        115 ASSHYQPITIVKWSADSNFIVTGGE--DGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLS  192 (343)
Q Consensus       115 ~~~~~~~v~~~~~~~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  192 (343)
                      +..|.++|.+++|+|++++|++++.  +..+++|++++++                      ....+.+|...|.+++|+
T Consensus        98 ~~~~~~~v~~v~~s~d~~~l~~~~~~~~~~~~v~~~~~~~----------------------~~~~l~~h~~~v~~v~~~  155 (311)
T d1nr0a1          98 IPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGT----------------------SNGNLTGQARAMNSVDFK  155 (311)
T ss_dssp             EECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCC----------------------BCBCCCCCSSCEEEEEEC
T ss_pred             cccccCcccccccccccccccccccccccccccccccccc----------------------cccccccccccccccccc
Confidence            7889999999999999999999876  4569999998764                      344567899999999999


Q ss_pred             cCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCC
Q psy10867        193 KLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTS  271 (343)
Q Consensus       193 ~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~  271 (343)
                      |+++ ..+++|+.|+.|++||+++++....+. +..+|.++.|+|+++++++++.|+.|++||+........+.    ..
T Consensus       156 ~~~~-~~l~sgs~d~~i~i~d~~~~~~~~~~~~~~~~i~~v~~~p~~~~l~~~~~d~~v~~~d~~~~~~~~~~~----~~  230 (311)
T d1nr0a1         156 PSRP-FRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFE----DD  230 (311)
T ss_dssp             SSSS-CEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECB----CT
T ss_pred             ccce-eeecccccccccccccccccccccccccccccccccccCcccccccccccccccccccccccccccccc----cc
Confidence            9984 468899999999999999998888776 67889999999999999999999999999998765443321    11


Q ss_pred             CCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc-cC-CceEEEEEccCCCeeeecccC
Q psy10867        272 NPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-HK-GPVLGAFLGLLPPAIHDYDFT  341 (343)
Q Consensus       272 ~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~-~~v~~~~~sp~~~~l~~~~~~  341 (343)
                      .....+|...|++++|+|++++|++|+.||.|+|||+++++++.++. +. .....+.+.+++++|++++..
T Consensus       231 ~~~~~~h~~~V~~~~~s~~~~~l~tgs~Dg~v~iwd~~t~~~~~~l~~~~~~~~~~~~~~~~~~~l~s~s~d  302 (311)
T d1nr0a1         231 SLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISAN  302 (311)
T ss_dssp             TSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETT
T ss_pred             ccccccccccccccccCCCCCEEEEEeCCCeEEEEECCCCcEEEEEECCCCccceEEEEEecCCEEEEEECC
Confidence            33456799999999999999999999999999999999999999887 32 223344555566778887754

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=3.1e-45  Score=295.92  Aligned_cols=286  Identities=17%  Similarity=0.261  Sum_probs=257.3

Q ss_pred             EEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-ec
Q psy10867         19 VWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SI   97 (343)
Q Consensus        19 iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~   97 (343)
                      .|.. ......++++|.+ .|++++|+|++.++++++.||+|+|||+.+++.+..+..|...|.+++|+|++.++++ +.
T Consensus         2 ~w~p-~~~~~~~L~GH~~-~I~~l~~sp~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~~~~~~   79 (317)
T d1vyhc1           2 EWIP-RPPEKYALSGHRS-PVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSA   79 (317)
T ss_dssp             CCCC-CSSCSCEEECCSS-CEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred             ccCC-CCCccEEEcCCCC-CeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCEEEEEeCCCCcEEEEeeeccccccccccc
Confidence            4654 3344568999999 9999999999999999999999999999999999888899999999999999999997 67


Q ss_pred             CCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceee
Q psy10867         98 ETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLH  177 (343)
Q Consensus        98 d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (343)
                      ++.+.+|+....+....+..|...+.++.|+|+++.+++++.|+.+++||++++.                      ...
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~----------------------~~~  137 (317)
T d1vyhc1          80 DMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGY----------------------CVK  137 (317)
T ss_dssp             TSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCC----------------------EEE
T ss_pred             ccccccccccccccccccccccccceeeeccCCCceEEeeccCcceeEeecccce----------------------eee
Confidence            8899999999999888899999999999999999999999999999999998864                      445


Q ss_pred             eecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCC-------------------
Q psy10867        178 VKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGT-------------------  237 (343)
Q Consensus       178 ~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~-------------------  237 (343)
                      .+..|...+.+++++|++  .++++++.|+.+++|++++++....+. +...+.++.|+|+                   
T Consensus       138 ~~~~~~~~~~~~~~~~~~--~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (317)
T d1vyhc1         138 TFTGHREWVRMVRPNQDG--TLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGK  215 (317)
T ss_dssp             EEECCSSCEEEEEECTTS--SEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC------
T ss_pred             EEccCCCcceeeecccCC--CEEEEEeCCCeEEEEeeccceeeEEEecCCCCceEEEEeeccccceeeccccceeeeecc
Confidence            566899999999999998  899999999999999999999888776 6777888988875                   


Q ss_pred             -CCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeee
Q psy10867        238 -EDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRT  316 (343)
Q Consensus       238 -~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~  316 (343)
                       +.++++++.|+.|++||+++...           +..+.+|...|.+++|+|++++|++++.||.|++||+.+++++.+
T Consensus       216 ~~~~~~~~~~d~~i~~~~~~~~~~-----------~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~  284 (317)
T d1vyhc1         216 PGPFLLSGSRDKTIKMWDVSTGMC-----------LMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKT  284 (317)
T ss_dssp             -CCEEEEEETTSEEEEEETTTTEE-----------EEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEE
T ss_pred             CCceeEeccCCCEEEEEECCCCcE-----------EEEEeCCCCCEEEEEECCCCCEEEEEECCCeEEEEECCCCcEEEE
Confidence             35789999999999999887543           456778999999999999999999999999999999999999999


Q ss_pred             cc-cCCceEEEEEccCCCeeeecccC
Q psy10867        317 IQ-HKGPVLGAFLGLLPPAIHDYDFT  341 (343)
Q Consensus       317 ~~-~~~~v~~~~~sp~~~~l~~~~~~  341 (343)
                      +. |.++|++++|+|++++|++++..
T Consensus       285 ~~~h~~~V~~~~~s~~~~~l~s~s~D  310 (317)
T d1vyhc1         285 LNAHEHFVTSLDFHKTAPYVVTGSVD  310 (317)
T ss_dssp             EECCSSCEEEEEECSSSSCEEEEETT
T ss_pred             EcCCCCCEEEEEEcCCCCEEEEEeCC
Confidence            98 99999999999999999998753

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=5.4e-45  Score=293.79  Aligned_cols=258  Identities=14%  Similarity=0.135  Sum_probs=221.5

Q ss_pred             CCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccc--eecccCCcceEEEEECCCCC
Q psy10867         14 SGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKA--QLRLICPGRISSMQASPDAA   91 (343)
Q Consensus        14 dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~--~~~~~~~~~v~~~~~s~~~~   91 (343)
                      ++.|.+||+.+++..+.+.+|.. .|++++|+|+|.++++|+.||+|++||+.+++..  ..+..|..+|.+++|+|+++
T Consensus        37 ~~~v~i~~~~~~~~~~~~~~H~~-~v~~~~~sp~g~~latg~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~v~~s~d~~  115 (311)
T d1nr0a1          37 GTSVYTVPVGSLTDTEIYTEHSH-QTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESK  115 (311)
T ss_dssp             TTEEEEEETTCSSCCEEECCCSS-CEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSC
T ss_pred             CCEEEEEECCCCceeEEEcCCCC-CEEEEEEeCCCCeEeccccCceEeeeeeeccccccccccccccCcccccccccccc
Confidence            45799999999999999999999 9999999999999999999999999999987654  44567899999999999999


Q ss_pred             EEEEec---CCeEEEEEccCCceEEEecccCCCeEEEEEecCCCE-EEEecCCCeEEEeecCccceeeeeecCCCCCCCC
Q psy10867         92 YIAVSI---ETKLHMWQISSGRLLATASSHYQPITIVKWSADSNF-IVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGK  167 (343)
Q Consensus        92 ~l~~~~---d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~  167 (343)
                      +|+++.   +..+++|++++++....+.+|.+.|.+++|+|++++ |++|+.||.|++||+++.+               
T Consensus       116 ~l~~~~~~~~~~~~v~~~~~~~~~~~l~~h~~~v~~v~~~~~~~~~l~sgs~d~~i~i~d~~~~~---------------  180 (311)
T d1nr0a1         116 RIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFK---------------  180 (311)
T ss_dssp             EEEEEECCSSCSEEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBE---------------
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccceeeecccccccccccccccccc---------------
Confidence            888742   456999999999999999999999999999999885 8889999999999999864               


Q ss_pred             ccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee--------cCCcEEEEEEcCCCC
Q psy10867        168 GVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI--------LDTRLTCVAFDGTED  239 (343)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~--------~~~~i~~~~~~~~~~  239 (343)
                             .......|..+|.++.++|++  +++++++.|+.+++||.++++....+.        |...|.+++|+|+++
T Consensus       181 -------~~~~~~~~~~~i~~v~~~p~~--~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~  251 (311)
T d1nr0a1         181 -------FKSTFGEHTKFVHSVRYNPDG--SLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGT  251 (311)
T ss_dssp             -------EEEEECCCSSCEEEEEECTTS--SEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSS
T ss_pred             -------cccccccccccccccccCccc--cccccccccccccccccccccccccccccccccccccccccccccCCCCC
Confidence                   445566899999999999999  899999999999999999988877764        456799999999999


Q ss_pred             EEEEEcCCCcEEEEEeecccccccccccCCCCCCcccccc---CcEEEEEEccCCCEEEEEeCCCcEEEEecc
Q psy10867        240 NIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHE---KQVTSLSCSITGITLLSSSADETLKIWHTI  309 (343)
Q Consensus       240 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~---~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~  309 (343)
                      +|++|+.||.|++||+++.+...           .+..|.   ..+.++.  ++++.|++++.||.|++||.+
T Consensus       252 ~l~tgs~Dg~v~iwd~~t~~~~~-----------~l~~~~~~~~~~~~~~--~~~~~l~s~s~dG~i~~wd~d  311 (311)
T d1nr0a1         252 KIASASADKTIKIWNVATLKVEK-----------TIPVGTRIEDQQLGII--WTKQALVSISANGFINFVNPE  311 (311)
T ss_dssp             EEEEEETTSEEEEEETTTTEEEE-----------EEECCSSGGGCEEEEE--ECSSCEEEEETTCCEEEEETT
T ss_pred             EEEEEeCCCeEEEEECCCCcEEE-----------EEECCCCccceEEEEE--ecCCEEEEEECCCEEEEEeCC
Confidence            99999999999999998765432           333332   2344444  456689999999999999974

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=5.1e-44  Score=297.61  Aligned_cols=306  Identities=20%  Similarity=0.250  Sum_probs=245.7

Q ss_pred             EecCCCCeEEEEecCCceE----EEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecc---------
Q psy10867          9 FSYDGSGAISVWEPKGGTL----LMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRL---------   75 (343)
Q Consensus         9 ~s~~~dg~i~iwd~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~---------   75 (343)
                      +....++...+|+....+.    +....+|.+ .|+|++|+|||++|++|+ |+.|+|||+.+++.+..+.         
T Consensus        32 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~H~~-~V~~l~fs~dg~~lasg~-d~~i~iW~~~~~~~~~~~~~~~~~~~~~  109 (388)
T d1erja_          32 LKKQTNDYYILYNPALPREIDVELHKSLDHTS-VVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDP  109 (388)
T ss_dssp             SEEECSSCEEEECTTSCCCEEEEEEEEEECSS-CCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC--------
T ss_pred             cccCCCCcEEEeCCCCCcceeeeeEeeCCCCC-cEEEEEECCCCCEEEEEe-CCeEEEEEecccceEeeecccccccccc
Confidence            3455678899999765432    233446888 999999999999999997 5899999998877654332         


Q ss_pred             ---------cCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEE
Q psy10867         76 ---------ICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICV  145 (343)
Q Consensus        76 ---------~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~i  145 (343)
                               .|...|.+++|+|++++|++ +.|+.|++|+...++.+..+.+|...|.++++++++..+++++.++.+++
T Consensus       110 ~~~~~~~~~~~~~~V~~l~~s~~~~~l~s~~~dg~v~i~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~i~~  189 (388)
T d1erja_         110 ENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRI  189 (388)
T ss_dssp             ---------CCCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred             cccccccccCCCCCEEEEEECCCCCcceecccccccccccccccccccccccccccccccccccccccccccccceeeee
Confidence                     45667999999999999997 68999999999999999999999999999999999999999999999999


Q ss_pred             eecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeec-CCCceEEEEeeCCCeEEEEecCCCceEEEee
Q psy10867        146 WQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSK-LGAKSRVASVSHDRTCKIFDLCTGEDLLSLI  224 (343)
Q Consensus       146 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~  224 (343)
                      ||.++.....                      ... +.....++.+.+ ++  .+|++++.|+.|++||.++++....+.
T Consensus       190 ~d~~~~~~~~----------------------~~~-~~~~~~~~~~~~~~~--~~l~~~~~d~~i~i~~~~~~~~~~~~~  244 (388)
T d1erja_         190 WDLRTGQCSL----------------------TLS-IEDGVTTVAVSPGDG--KYIAAGSLDRAVRVWDSETGFLVERLD  244 (388)
T ss_dssp             EETTTTEEEE----------------------EEE-CSSCEEEEEECSTTC--CEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred             eecccccccc----------------------ccc-cccccccccccCCCC--CeEEEEcCCCeEEEeecccCccceeec
Confidence            9998864322                      222 334455555555 55  799999999999999999988776653


Q ss_pred             --------cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccc-cCCCCCCccccccCcEEEEEEccCCCEEE
Q psy10867        225 --------LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHI-QDSTSNPDFIGHEKQVTSLSCSITGITLL  295 (343)
Q Consensus       225 --------~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~s~~~~~l~  295 (343)
                              |...|.+++|+|++++|++++.|+.|++||++.......... ...........|...|++++|+|++++|+
T Consensus       245 ~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~  324 (388)
T d1erja_         245 SENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYIL  324 (388)
T ss_dssp             ------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEE
T ss_pred             cccccccCCCCCEEEEEECCCCCEEEEEECCCcEEEEeccCCccccccccccccceeeecccccceEEEEEECCCCCEEE
Confidence                    456799999999999999999999999999987654432221 11222445567889999999999999999


Q ss_pred             EEeCCCcEEEEecccceeeeecc-cCCceEEEE------EccCCCeeeecccC
Q psy10867        296 SSSADETLKIWHTISRQCLRTIQ-HKGPVLGAF------LGLLPPAIHDYDFT  341 (343)
Q Consensus       296 s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~------~sp~~~~l~~~~~~  341 (343)
                      +|+.||.|++||+.+++++.++. |.+.|.+++      |+|++++|++++..
T Consensus       325 sg~~dg~i~vwd~~~~~~~~~l~~H~~~V~~~~~~~~~~~spd~~~l~s~s~D  377 (388)
T d1erja_         325 SGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGD  377 (388)
T ss_dssp             EEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETT
T ss_pred             EEeCCCEEEEEECCCCcEEEEEeCCCCCEEEEEEecCcccCCCCCEEEEEeCC
Confidence            99999999999999999999999 999999987      46799999998753

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.3e-43  Score=286.33  Aligned_cols=268  Identities=22%  Similarity=0.311  Sum_probs=240.4

Q ss_pred             eEEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEE
Q psy10867          6 EVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQ   85 (343)
Q Consensus         6 ~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~   85 (343)
                      .+++|++.||+|+|||+.+++.+.++++|.. .|.+++++|++.+++.+..++.+.+|+....+.......|...+.++.
T Consensus        30 ~~l~s~s~Dg~i~iWd~~~~~~~~~~~~h~~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (317)
T d1vyhc1          30 SVMVSASEDATIKVWDYETGDFERTLKGHTD-SVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVS  108 (317)
T ss_dssp             SEEEEEESSSCEEEEETTTCCCCEEECCCSS-CEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEE
T ss_pred             CEEEEEeCCCeEEEEECCCCCEEEEEeCCCC-cEEEEeeecccccccccccccccccccccccccccccccccccceeee
Confidence            3445555589999999999999999999999 999999999999999999889999999998888877888999999999


Q ss_pred             ECCCCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCC
Q psy10867         86 ASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGS  164 (343)
Q Consensus        86 ~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~  164 (343)
                      |+|++..+++ +.|+.+++||+++++.+..+.+|...+.+++|+|++++|++++.|+.|++|++.+..            
T Consensus       109 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~------------  176 (317)
T d1vyhc1         109 IMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE------------  176 (317)
T ss_dssp             ECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC------------
T ss_pred             ccCCCceEEeeccCcceeEeecccceeeeEEccCCCcceeeecccCCCEEEEEeCCCeEEEEeeccce------------
Confidence            9999998887 789999999999999999999999999999999999999999999999999998864            


Q ss_pred             CCCccccccceeeeecccccceEEEEeecCCC------------------ceEEEEeeCCCeEEEEecCCCceEEEee-c
Q psy10867        165 SGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGA------------------KSRVASVSHDRTCKIFDLCTGEDLLSLI-L  225 (343)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~------------------~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~  225 (343)
                                ....+..|...+.+++++|+..                  +.++++++.|+.|++||+++++.+..+. |
T Consensus       177 ----------~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~  246 (317)
T d1vyhc1         177 ----------CKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGH  246 (317)
T ss_dssp             ----------EEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECC
T ss_pred             ----------eeEEEecCCCCceEEEEeeccccceeeccccceeeeeccCCceeEeccCCCEEEEEECCCCcEEEEEeCC
Confidence                      4445556777888888877642                  1478999999999999999999988887 7


Q ss_pred             CCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEE
Q psy10867        226 DTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKI  305 (343)
Q Consensus       226 ~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~i  305 (343)
                      ...|.+++|+|++++|++|+.||.|++||+++.+.           +..+.+|...|++++|+|++++|++|+.||+|++
T Consensus       247 ~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~-----------~~~~~~h~~~V~~~~~s~~~~~l~s~s~Dg~i~i  315 (317)
T d1vyhc1         247 DNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRC-----------MKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV  315 (317)
T ss_dssp             SSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCC-----------CEEEECCSSCEEEEEECSSSSCEEEEETTSEEEE
T ss_pred             CCCEEEEEECCCCCEEEEEECCCeEEEEECCCCcE-----------EEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEE
Confidence            88899999999999999999999999999987433           5678899999999999999999999999999999


Q ss_pred             Ee
Q psy10867        306 WH  307 (343)
Q Consensus       306 wd  307 (343)
                      ||
T Consensus       316 Wd  317 (317)
T d1vyhc1         316 WE  317 (317)
T ss_dssp             EC
T ss_pred             eC
Confidence            97

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=5.5e-43  Score=291.33  Aligned_cols=278  Identities=19%  Similarity=0.269  Sum_probs=228.6

Q ss_pred             cccceEEEecCC-------CCeEEEEecCCceEEEEEec------------------CCCCcceEEEEeCCceEEEEEcC
Q psy10867          2 SLLNEVAFSYDG-------SGAISVWEPKGGTLLMSYKG------------------ASVLSPHSMCLLGNDYVLGVEKG   56 (343)
Q Consensus         2 ~~v~~~~~s~~~-------dg~i~iwd~~~~~~~~~~~~------------------~~~~~v~~~~~~~~~~~~~~~~~   56 (343)
                      +.|+++.|++++       |+.|+|||+.+++.+..+..                  |.. .|.+++|+|++.++++++.
T Consensus        63 ~~V~~l~fs~dg~~lasg~d~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~V~~l~~s~~~~~l~s~~~  141 (388)
T d1erja_          63 SVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDL-YIRSVCFSPDGKFLATGAE  141 (388)
T ss_dssp             SCCCEEEECTTSSEEEEECBSCEEEEETTTCCEEEEECC-----------------CCCC-BEEEEEECTTSSEEEEEET
T ss_pred             CcEEEEEECCCCCEEEEEeCCeEEEEEecccceEeeecccccccccccccccccccCCCC-CEEEEEECCCCCcceeccc
Confidence            457788887776       79999999999988877654                  334 6999999999999999999


Q ss_pred             CCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEe-cCCCEE
Q psy10867         57 KPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWS-ADSNFI  134 (343)
Q Consensus        57 ~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l  134 (343)
                      ||.|++|+...++......+|...|.++.|++++..+++ +.++.+++||..+.........+... .++.+. +++++|
T Consensus       142 dg~v~i~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l  220 (388)
T d1erja_         142 DRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGV-TTVAVSPGDGKYI  220 (388)
T ss_dssp             TSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCE-EEEEECSTTCCEE
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccceeeeeeecccccccccccccccc-ccccccCCCCCeE
Confidence            999999999999988888899999999999999988886 67899999999988877777655554 455555 488999


Q ss_pred             EEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEec
Q psy10867        135 VTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDL  214 (343)
Q Consensus       135 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~  214 (343)
                      ++++.||.|++||..++.....+.               .......+|...|.+++|+|++  .+|++++.|+.|++||+
T Consensus       221 ~~~~~d~~i~i~~~~~~~~~~~~~---------------~~~~~~~~h~~~v~~l~~s~~~--~~l~s~~~d~~i~iwd~  283 (388)
T d1erja_         221 AAGSLDRAVRVWDSETGFLVERLD---------------SENESGTGHKDSVYSVVFTRDG--QSVVSGSLDRSVKLWNL  283 (388)
T ss_dssp             EEEETTSCEEEEETTTCCEEEEEC---------------------CCCSSCEEEEEECTTS--SEEEEEETTSEEEEEEC
T ss_pred             EEEcCCCeEEEeecccCccceeec---------------cccccccCCCCCEEEEEECCCC--CEEEEEECCCcEEEEec
Confidence            999999999999999887665543               1334456789999999999999  89999999999999999


Q ss_pred             CCCceEE-------------EeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCc
Q psy10867        215 CTGEDLL-------------SLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQ  281 (343)
Q Consensus       215 ~~~~~~~-------------~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (343)
                      ++++...             ...+...+.+++|+|++++|++|+.||.|++||+++.+.           +..+.+|.+.
T Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~-----------~~~l~~H~~~  352 (388)
T d1erja_         284 QNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNP-----------LLMLQGHRNS  352 (388)
T ss_dssp             ---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCE-----------EEEEECCSSC
T ss_pred             cCCccccccccccccceeeecccccceEEEEEECCCCCEEEEEeCCCEEEEEECCCCcE-----------EEEEeCCCCC
Confidence            8654322             122567899999999999999999999999999987543           5668899999


Q ss_pred             EEEEEE------ccCCCEEEEEeCCCcEEEEecc
Q psy10867        282 VTSLSC------SITGITLLSSSADETLKIWHTI  309 (343)
Q Consensus       282 v~~~~~------s~~~~~l~s~~~dg~i~iwd~~  309 (343)
                      |+++++      +|++++||+|+.||+|+||+++
T Consensus       353 V~~~~~~~~~~~spd~~~l~s~s~Dg~I~iW~~~  386 (388)
T d1erja_         353 VISVAVANGSSLGPEYNVFATGSGDCKARIWKYK  386 (388)
T ss_dssp             EEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEE
T ss_pred             EEEEEEecCcccCCCCCEEEEEeCCCEEEEEeee
Confidence            999975      6789999999999999999985

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=1.4e-42  Score=287.14  Aligned_cols=303  Identities=15%  Similarity=0.116  Sum_probs=234.5

Q ss_pred             CcccceEEEecCC--------CCeEEEEecCCce--EEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCccc
Q psy10867          1 MSLLNEVAFSYDG--------SGAISVWEPKGGT--LLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEK   70 (343)
Q Consensus         1 ~~~v~~~~~s~~~--------dg~i~iwd~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~   70 (343)
                      ++||++++|++++        ||.|+|||..+++  .+..+++|.. +|.+++|+|++.++++++.|+.|++||+.++..
T Consensus         7 ~~pIt~~~~s~dg~~la~~~~~~~i~iw~~~~~~~~~~~~l~gH~~-~V~~l~fsp~~~~l~s~s~D~~i~vWd~~~~~~   85 (371)
T d1k8kc_           7 VEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNG-QVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTW   85 (371)
T ss_dssp             SSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSS-CEEEEEEETTTTEEEEEETTSCEEEEEEETTEE
T ss_pred             CCCeEEEEECCCCCEEEEEeCCCEEEEEECCCCCEEEEEEecCCCC-CEEEEEECCCCCEEEEEECCCeEEEEeeccccc
Confidence            4688999888877        6999999997765  6778899999 999999999999999999899999999987654


Q ss_pred             c--eecccCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCCce----EEEecccCCCeEEEEEecCCCEEEEecCCCeE
Q psy10867         71 A--QLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGRL----LATASSHYQPITIVKWSADSNFIVTGGEDGTI  143 (343)
Q Consensus        71 ~--~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i  143 (343)
                      .  ..+..|...|.+++|+|++++|++ +.|+.+++|+++....    ......|...|.+++|+|++++|++|+.|+.|
T Consensus        86 ~~~~~~~~~~~~v~~i~~~p~~~~l~~~s~d~~i~i~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~D~~v  165 (371)
T d1k8kc_          86 KPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKC  165 (371)
T ss_dssp             EEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCE
T ss_pred             ccccccccccccccccccccccccceeecccCcceeeeeecccccccccccccccccccccccccccccceeccccCcEE
Confidence            4  344578889999999999999887 6789999999887653    23455788999999999999999999999999


Q ss_pred             EEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEe
Q psy10867        144 CVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSL  223 (343)
Q Consensus       144 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~  223 (343)
                      ++|+.............    .................|...|.+++|+|++  ++|++++.|+.|++||+++++.+..+
T Consensus       166 ~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g--~~l~s~~~d~~i~iwd~~~~~~~~~~  239 (371)
T d1k8kc_         166 RIFSAYIKEVEERPAPT----PWGSKMPFGELMFESSSSCGWVHGVCFSANG--SRVAWVSHDSTVCLADADKKMAVATL  239 (371)
T ss_dssp             EEEECCCTTTSCCCCCB----TTBSCCCTTCEEEECCCCSSCEEEEEECSSS--SEEEEEETTTEEEEEEGGGTTEEEEE
T ss_pred             EEEeeccCccccccccc----cccccccceeeeeeccCccCcEEEEEeeccc--ccccccccCCcceEEeeecccceeee
Confidence            99998765432211100    0011112234566677899999999999999  79999999999999999999998888


Q ss_pred             e-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeeccccccccc----cc--------------------------CCCCC
Q psy10867        224 I-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHH----IQ--------------------------DSTSN  272 (343)
Q Consensus       224 ~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~----~~--------------------------~~~~~  272 (343)
                      . +..+|.+++|+|++++|++|. |+.+++|............    ..                          .....
T Consensus       240 ~~~~~~v~s~~fs~d~~~la~g~-d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (371)
T d1k8kc_         240 ASETLPLLAVTFITESSLVAAGH-DCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGA  318 (371)
T ss_dssp             ECSSCCEEEEEEEETTEEEEEET-TSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------C
T ss_pred             ecccccceeeeecCCCCEEEEEc-CCceEEEEeeCCCceEEEeeeecCccccccccccceeeEecccceeEEeccccccc
Confidence            7 567899999999998887665 7777777665432111100    00                          00001


Q ss_pred             CccccccCcEEEEEEccCC----CEEEEEeCCCcEEEEecccc
Q psy10867        273 PDFIGHEKQVTSLSCSITG----ITLLSSSADETLKIWHTISR  311 (343)
Q Consensus       273 ~~~~~~~~~v~~~~~s~~~----~~l~s~~~dg~i~iwd~~~~  311 (343)
                      .....|.+.|+++++.+.+    ..++|++.||.|++||+++.
T Consensus       319 ~~~~~H~~~I~~i~~~~~~~~~~~~~~T~g~Dg~v~iW~~~~~  361 (371)
T d1k8kc_         319 GLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSL  361 (371)
T ss_dssp             CCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHH
T ss_pred             eecccccCCEEEEEEeCCCCcceEEEEEEcCCCeEEEEeCCcC
Confidence            1122488999999998754    36899999999999999753

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=5.8e-42  Score=275.15  Aligned_cols=278  Identities=15%  Similarity=0.167  Sum_probs=226.1

Q ss_pred             ceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecc-cCCcceEEEEECCCCCEEEEecCCeEEE
Q psy10867         25 GTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRL-ICPGRISSMQASPDAAYIAVSIETKLHM  103 (343)
Q Consensus        25 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~d~~i~v  103 (343)
                      |+..+.++||.. .|++++|+|+++++++|+.||.|++||+++++..+.+. .|...|.+++|+|++++++++.|+.+++
T Consensus         2 g~~~~~~~GH~~-~V~~l~~s~dg~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~h~~~v~~v~~~~~g~~~~~~~d~~v~~   80 (299)
T d1nr0a2           2 GSIDQVRYGHNK-AITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKV   80 (299)
T ss_dssp             TEEEEEECCCSS-CEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEE
T ss_pred             CccceEcCCCCC-CcEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCCcEEEEEeeccceeecccceeeEEE
Confidence            678899999999 99999999999999999999999999999988876664 6889999999999999999999999999


Q ss_pred             EEccCCce---EEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeec
Q psy10867        104 WQISSGRL---LATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKS  180 (343)
Q Consensus       104 ~~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (343)
                      |+......   ......+...+.+++|+|+++.+++++ ++.+++|+....                        ...  
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~-~~~i~~~~~~~~------------------------~~~--  133 (299)
T d1nr0a2          81 VPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAAC-YKHIAIYSHGKL------------------------TEV--  133 (299)
T ss_dssp             ECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEE-SSEEEEEETTEE------------------------EEE--
T ss_pred             eccCCccccccccccccccccccccccccccccccccc-cccccccccccc------------------------ccc--
Confidence            99865432   122335677899999999999777665 478999986542                        111  


Q ss_pred             ccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEE--EeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecc
Q psy10867        181 QHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLL--SLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQV  258 (343)
Q Consensus       181 ~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~  258 (343)
                      .....+.+++|+|++  +++++++.|+.+++||+++++...  ...+...|.+++|+|++++|++++.|+.|++||+...
T Consensus       134 ~~~~~~~~~~~s~~~--~~l~~g~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~~~~~~  211 (299)
T d1nr0a2         134 PISYNSSCVALSNDK--QFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANN  211 (299)
T ss_dssp             ECSSCEEEEEECTTS--CEEEEEETTSEEEEEEEETTEEEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGT
T ss_pred             ccccccccccccccc--ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            133457889999998  899999999999999998876543  4457889999999999999999999999999999875


Q ss_pred             cccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeec--c--cCCceEEEEEccCCCe
Q psy10867        259 PRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTI--Q--HKGPVLGAFLGLLPPA  334 (343)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~--~--~~~~v~~~~~sp~~~~  334 (343)
                      .....        ...+.+|...|++++|+|++++|++|+.||.|++||++++.....+  .  +...+..+.| +++++
T Consensus       212 ~~~~~--------~~~~~~h~~~v~~l~~s~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~  282 (299)
T d1nr0a2         212 FELAH--------TNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIW-LNETT  282 (299)
T ss_dssp             TEESC--------CCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTTSCCEEETTSSTTSCEEEEEE-EETTE
T ss_pred             ccccc--------cccccccccccccccccccccceEEEcCCCEEEEEECCCCCcceEEEecCCCCCcEEEEEE-CCCCE
Confidence            44322        3456789999999999999999999999999999999876543322  2  3455666654 56788


Q ss_pred             eeecccC
Q psy10867        335 IHDYDFT  341 (343)
Q Consensus       335 l~~~~~~  341 (343)
                      |++++..
T Consensus       283 l~s~s~D  289 (299)
T d1nr0a2         283 IVSAGQD  289 (299)
T ss_dssp             EEEEETT
T ss_pred             EEEEeCC
Confidence            8888753

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=5e-41  Score=274.15  Aligned_cols=282  Identities=15%  Similarity=0.185  Sum_probs=243.3

Q ss_pred             ceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-ecCCeEEE
Q psy10867         25 GTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SIETKLHM  103 (343)
Q Consensus        25 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v  103 (343)
                      .+..+++++|.+ .|++++|+|++.+|++|+.||.|+|||+.+++.+..+..|...|.+++|+|++.++++ +.|+.+.+
T Consensus        45 ~~~~~tL~GH~~-~I~~l~~s~~~~~l~sgs~Dg~v~iWd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~d~~i~~  123 (340)
T d1tbga_          45 MRTRRTLRGHLA-KIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSI  123 (340)
T ss_dssp             CCEEEEECCCSS-CEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEEECSCSCEEEEEECTTSSEEEEEETTCCEEE
T ss_pred             eeeeEEECCCCC-CEEEEEECCCCCEEEEEECCCceeeeecccceeEEEEecccccEEeeEeeccceeeeeecccceeec
Confidence            456788999999 9999999999999999999999999999999998888899999999999999999987 68999999


Q ss_pred             EEccCC----ceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeee
Q psy10867        104 WQISSG----RLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVK  179 (343)
Q Consensus       104 ~~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (343)
                      |+....    .....+.+|.......... .+..+.....+.....+......                      .....
T Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~  180 (340)
T d1tbga_         124 YNLKTREGNVRVSRELAGHTGYLSCCRFL-DDNQIVTSSGDTTCALWDIETGQ----------------------QTTTF  180 (340)
T ss_dssp             EESSSSCSCCCEEEEECCCSSCEEEEEEE-ETTEEEEEETTTEEEEEETTTTE----------------------EEEEE
T ss_pred             ccccccccccccceecccccccccccccc-ccccccccccccccccccccccc----------------------ccccc
Confidence            997654    3456677787766665554 45667778888889888887653                      33344


Q ss_pred             cccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecc
Q psy10867        180 SQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQV  258 (343)
Q Consensus       180 ~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~  258 (343)
                      ..+...+....+.+..  .++++++.|+.+++||+++++.+..+. |...|.+++|+|++++|++|+.|+.|++||++..
T Consensus       181 ~~~~~~~~~~~~~~~~--~~~~~~~~d~~v~i~d~~~~~~~~~~~~h~~~i~~v~~~p~~~~l~s~s~d~~i~~~~~~~~  258 (340)
T d1tbga_         181 TGHTGDVMSLSLAPDT--RLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRAD  258 (340)
T ss_dssp             ECCSSCEEEEEECTTS--SEEEEEETTTEEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT
T ss_pred             cccceeEeeecccccc--ceeEEeecCceEEEEECCCCcEEEEEeCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeeccc
Confidence            5577788899999988  799999999999999999999988887 6888999999999999999999999999999875


Q ss_pred             cccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc-cCCceEEEEEccCCCeeee
Q psy10867        259 PRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVLGAFLGLLPPAIHD  337 (343)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~  337 (343)
                      .....         .....+...|++++|+|++++|++|+.||.|++||+.+++++.++. |.++|++++|+|++++|++
T Consensus       259 ~~~~~---------~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~H~~~V~~l~~s~d~~~l~s  329 (340)
T d1tbga_         259 QELMT---------YSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVAT  329 (340)
T ss_dssp             EEEEE---------ECCTTCCSCEEEEEECSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEE
T ss_pred             ccccc---------cccccccCceEEEEECCCCCEEEEEECCCEEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEE
Confidence            54332         1234567789999999999999999999999999999999999998 9999999999999999999


Q ss_pred             cccC
Q psy10867        338 YDFT  341 (343)
Q Consensus       338 ~~~~  341 (343)
                      ++..
T Consensus       330 ~s~D  333 (340)
T d1tbga_         330 GSWD  333 (340)
T ss_dssp             EETT
T ss_pred             EccC
Confidence            8754

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=1.5e-40  Score=271.28  Aligned_cols=269  Identities=17%  Similarity=0.292  Sum_probs=232.8

Q ss_pred             ccceEEEecCC--------CCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccc---
Q psy10867          3 LLNEVAFSYDG--------SGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKA---   71 (343)
Q Consensus         3 ~v~~~~~s~~~--------dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~---   71 (343)
                      +|+++.|++++        ||.|+|||+.+++.+..+..|.. .|.+++|+|++.++++++.|+.+++|+.......   
T Consensus        57 ~I~~l~~s~~~~~l~sgs~Dg~v~iWd~~~~~~~~~~~~~~~-~v~~v~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~  135 (340)
T d1tbga_          57 KIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSS-WVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRV  135 (340)
T ss_dssp             CEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEEECSCS-CEEEEEECTTSSEEEEEETTCCEEEEESSSSCSCCCE
T ss_pred             CEEEEEECCCCCEEEEEECCCceeeeecccceeEEEEecccc-cEEeeEeeccceeeeeecccceeeccccccccccccc
Confidence            45555555554        89999999999999999999999 9999999999999999999999999997765433   


Q ss_pred             -eecccCCcceEEEEECCCCCEEEEecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCc
Q psy10867         72 -QLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSR  150 (343)
Q Consensus        72 -~~~~~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~  150 (343)
                       ..+..|...........+........+.....+.............+...+....+.+.+.++++++.|+.|++||+++
T Consensus       136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~i~d~~~  215 (340)
T d1tbga_         136 SRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVRE  215 (340)
T ss_dssp             EEEECCCSSCEEEEEEEETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTTEEEEEETTT
T ss_pred             ceecccccccccccccccccccccccccccccccccccccccccccccceeEeeeccccccceeEEeecCceEEEEECCC
Confidence             3445667777766666666666668899999999888877777778888999999999999999999999999999988


Q ss_pred             cceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee---cCC
Q psy10867        151 LICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI---LDT  227 (343)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~---~~~  227 (343)
                      +.                      ++..+.+|...|++++|+|++  .+|++++.|+.|++||++..+....+.   +..
T Consensus       216 ~~----------------------~~~~~~~h~~~i~~v~~~p~~--~~l~s~s~d~~i~~~~~~~~~~~~~~~~~~~~~  271 (340)
T d1tbga_         216 GM----------------------CRQTFTGHESDINAICFFPNG--NAFATGSDDATCRLFDLRADQELMTYSHDNIIC  271 (340)
T ss_dssp             TE----------------------EEEEECCCSSCEEEEEECTTS--SEEEEEETTSCEEEEETTTTEEEEEECCTTCCS
T ss_pred             Cc----------------------EEEEEeCCCCCeEEEEECCCC--CEEEEEeCCCeEEEEeecccccccccccccccC
Confidence            64                      455667899999999999999  899999999999999999988877764   456


Q ss_pred             cEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEe
Q psy10867        228 RLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWH  307 (343)
Q Consensus       228 ~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd  307 (343)
                      .+.+++|+|++++|++|+.||.|++||+.+.+.           +..+.+|..+|++++|+|++++|++|+.||.|++||
T Consensus       272 ~i~~~~~s~~~~~l~~g~~dg~i~iwd~~~~~~-----------~~~~~~H~~~V~~l~~s~d~~~l~s~s~Dg~v~iWd  340 (340)
T d1tbga_         272 GITSVSFSKSGRLLLAGYDDFNCNVWDALKADR-----------AGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN  340 (340)
T ss_dssp             CEEEEEECSSSCEEEEEETTSCEEEEETTTCCE-----------EEEECCCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred             ceEEEEECCCCCEEEEEECCCEEEEEECCCCcE-----------EEEEcCCCCCEEEEEEeCCCCEEEEEccCCEEEEeC
Confidence            799999999999999999999999999887543           556788999999999999999999999999999997

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=1e-40  Score=275.76  Aligned_cols=239  Identities=9%  Similarity=0.093  Sum_probs=200.9

Q ss_pred             cceEEEEeCCceEEEEEcCCCeEEEEeCCCcc--cceecccCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCCceE--
Q psy10867         38 SPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQE--KAQLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGRLL--  112 (343)
Q Consensus        38 ~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~--~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~--  112 (343)
                      +|+|++|+|++.++++++.|+.|+|||..+++  .+..+.+|.++|.+++|+|++++|++ +.|+.|++||+.++...  
T Consensus         9 pIt~~~~s~dg~~la~~~~~~~i~iw~~~~~~~~~~~~l~gH~~~V~~l~fsp~~~~l~s~s~D~~i~vWd~~~~~~~~~   88 (371)
T d1k8kc_           9 PISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPT   88 (371)
T ss_dssp             CCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEE
T ss_pred             CeEEEEECCCCCEEEEEeCCCEEEEEECCCCCEEEEEEecCCCCCEEEEEECCCCCEEEEEECCCeEEEEeecccccccc
Confidence            89999999999999999988999999998765  44666799999999999999999997 68999999999877543  


Q ss_pred             EEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEee
Q psy10867        113 ATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLS  192 (343)
Q Consensus       113 ~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  192 (343)
                      ..+.+|...|.+++|+|+++.|++++.|+.+++|++........                  .......|...|.+++|+
T Consensus        89 ~~~~~~~~~v~~i~~~p~~~~l~~~s~d~~i~i~~~~~~~~~~~------------------~~~~~~~~~~~v~~v~~~  150 (371)
T d1k8kc_          89 LVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWV------------------CKHIKKPIRSTVLSLDWH  150 (371)
T ss_dssp             EECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEE------------------EEEECTTCCSCEEEEEEC
T ss_pred             cccccccccccccccccccccceeecccCcceeeeeeccccccc------------------cccccccccccccccccc
Confidence            45567889999999999999999999999999999877543322                  334456789999999999


Q ss_pred             cCCCceEEEEeeCCCeEEEEecCCCc------------------eEEEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEE
Q psy10867        193 KLGAKSRVASVSHDRTCKIFDLCTGE------------------DLLSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSF  253 (343)
Q Consensus       193 ~~~~~~~l~~~~~d~~i~~wd~~~~~------------------~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~  253 (343)
                      |++  .+|++++.|+.+++||.....                  .+.... +...+.+++|+|++++|++++.|+.|++|
T Consensus       151 p~~--~~l~s~s~D~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s~~~d~~i~iw  228 (371)
T d1k8kc_         151 PNS--VLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLA  228 (371)
T ss_dssp             TTS--SEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEE
T ss_pred             ccc--cceeccccCcEEEEEeeccCccccccccccccccccceeeeeeccCccCcEEEEEeecccccccccccCCcceEE
Confidence            998  899999999999999986432                  222322 56779999999999999999999999999


Q ss_pred             EeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEec
Q psy10867        254 CLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHT  308 (343)
Q Consensus       254 d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~  308 (343)
                      |+.....           +..+..|..+|.+++|+|++++|++|+ |+.+++|..
T Consensus       229 d~~~~~~-----------~~~~~~~~~~v~s~~fs~d~~~la~g~-d~~~~~~~~  271 (371)
T d1k8kc_         229 DADKKMA-----------VATLASETLPLLAVTFITESSLVAAGH-DCFPVLFTY  271 (371)
T ss_dssp             EGGGTTE-----------EEEEECSSCCEEEEEEEETTEEEEEET-TSSCEEEEE
T ss_pred             eeecccc-----------eeeeecccccceeeeecCCCCEEEEEc-CCceEEEEe
Confidence            9987543           456778899999999999998887654 777777654

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=2.5e-40  Score=265.55  Aligned_cols=269  Identities=14%  Similarity=0.213  Sum_probs=213.2

Q ss_pred             ccceEEEecC--------CCCeEEEEecCCceEEEEEe-cCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccc--
Q psy10867          3 LLNEVAFSYD--------GSGAISVWEPKGGTLLMSYK-GASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKA--   71 (343)
Q Consensus         3 ~v~~~~~s~~--------~dg~i~iwd~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~--   71 (343)
                      +|++++|+++        .||.|++||+++++.++.+. .|.. .|.+++|+|++.+++++.+ +.+++|+.......  
T Consensus        14 ~V~~l~~s~dg~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~h~~-~v~~v~~~~~g~~~~~~~d-~~v~~~~~~~~~~~~~   91 (299)
T d1nr0a2          14 AITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHAT-MITGIKTTSKGDLFTVSWD-DHLKVVPAGGSGVDSS   91 (299)
T ss_dssp             CEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSS-CEEEEEECTTSCEEEEETT-TEEEEECSSSSSSCTT
T ss_pred             CcEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCC-cEEEEEeeccceeecccce-eeEEEeccCCcccccc
Confidence            4556655554        48999999999999998885 5777 9999999999998888876 89999998765432  


Q ss_pred             -eecccCCcceEEEEECCCCCEEEEecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCc
Q psy10867         72 -QLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSR  150 (343)
Q Consensus        72 -~~~~~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~  150 (343)
                       .....+...+.+++|+|++++++++.++.+.+|+..  +.....  ....+.+++|+|+++++++|+.||.|++||+++
T Consensus        92 ~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~i~~~~~~--~~~~~~--~~~~~~~~~~s~~~~~l~~g~~dg~i~~~d~~~  167 (299)
T d1nr0a2          92 KAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHG--KLTEVP--ISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSG  167 (299)
T ss_dssp             SCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETT--EEEEEE--CSSCEEEEEECTTSCEEEEEETTSEEEEEEEET
T ss_pred             ccccccccccccccccccccccccccccccccccccc--cccccc--ccccccccccccccccccccccccccccccccc
Confidence             223356778999999999999999889999999843  333333  334578999999999999999999999999987


Q ss_pred             cceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee----cC
Q psy10867        151 LICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI----LD  226 (343)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~----~~  226 (343)
                      .....                     .....|...|.+++|+|++  .++++++.|+.|++||+.++.......    |.
T Consensus       168 ~~~~~---------------------~~~~~~~~~i~~~~~~~~~--~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~h~  224 (299)
T d1nr0a2         168 ASVSE---------------------VKTIVHPAEITSVAFSNNG--AFLVATDQSRKVIPYSVANNFELAHTNSWTFHT  224 (299)
T ss_dssp             TEEEE---------------------EEEEECSSCEEEEEECTTS--SEEEEEETTSCEEEEEGGGTTEESCCCCCCCCS
T ss_pred             ccccc---------------------ccccccccccccccccccc--ccccccccccccccccccccccccccccccccc
Confidence            64321                     2234588999999999998  899999999999999998876654332    57


Q ss_pred             CcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEE
Q psy10867        227 TRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIW  306 (343)
Q Consensus       227 ~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw  306 (343)
                      ..|.+++|+|++++|++|+.||.|++||++.......        ......+...+.++.| +++++|++++.|+.|++|
T Consensus       225 ~~v~~l~~s~~~~~l~sgs~dg~i~iwd~~~~~~~~~--------~~~~~~~~~~v~~~~~-~~~~~l~s~s~D~~i~iW  295 (299)
T d1nr0a2         225 AKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPI--------IIKGAHAMSSVNSVIW-LNETTIVSAGQDSNIKFW  295 (299)
T ss_dssp             SCEEEEEECTTSSEEEEEETTSCEEEEETTCTTSCCE--------EETTSSTTSCEEEEEE-EETTEEEEEETTSCEEEE
T ss_pred             cccccccccccccceEEEcCCCEEEEEECCCCCcceE--------EEecCCCCCcEEEEEE-CCCCEEEEEeCCCEEEEE
Confidence            7899999999999999999999999999987543221        1112234456666655 567899999999999999


Q ss_pred             ecc
Q psy10867        307 HTI  309 (343)
Q Consensus       307 d~~  309 (343)
                      |+.
T Consensus       296 dl~  298 (299)
T d1nr0a2         296 NVP  298 (299)
T ss_dssp             ECC
T ss_pred             ecc
Confidence            973

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=5.8e-39  Score=263.07  Aligned_cols=290  Identities=16%  Similarity=0.263  Sum_probs=227.3

Q ss_pred             eEEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecc--cCCcceEE
Q psy10867          6 EVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRL--ICPGRISS   83 (343)
Q Consensus         6 ~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~--~~~~~v~~   83 (343)
                      .++++++.||.|+|||+.+++++.++++|.. .|.+++|+|++. +++++.|+.|++|+....+......  .+......
T Consensus        24 ~~l~tgs~Dg~i~vWd~~~~~~~~~l~~H~~-~V~~l~~s~~~~-l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~  101 (355)
T d1nexb2          24 NYVITGADDKMIRVYDSINKKFLLQLSGHDG-GVWALKYAHGGI-LVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLD  101 (355)
T ss_dssp             TEEEEEETTTEEEEEETTTTEEEEEEECCSS-CEEEEEEETTTE-EEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEE
T ss_pred             CEEEEEeCCCeEEEEECCCCcEEEEEECCCC-CEEEEEEcCCCE-EEEEecccccccccccccccccccccccccccccc
Confidence            4678888899999999999999999999999 999999999875 5555666999999999887664443  33344566


Q ss_pred             EEECCCCCEEEE-ecCCeEEEEEccCCceEEEe-----------------------cccCCCeEEEEEecCCCEEEEecC
Q psy10867         84 MQASPDAAYIAV-SIETKLHMWQISSGRLLATA-----------------------SSHYQPITIVKWSADSNFIVTGGE  139 (343)
Q Consensus        84 ~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~-----------------------~~~~~~v~~~~~~~~~~~l~s~~~  139 (343)
                      ..+.+++.++++ +.|+.|++|++.++......                       ..|...+  ..+.+++++++++..
T Consensus       102 ~~~~~~~~~~~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~~~~~~~~~~~~  179 (355)
T d1nexb2         102 IVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASV--RTVSGHGNIVVSGSY  179 (355)
T ss_dssp             EEEETTEEEEEEEETTSEEEEEECCC-----------CCCEEESCTTTCTTEEEEEECCSSCE--EEEEEETTEEEEEET
T ss_pred             cccccccceeeeecCCCcEEEEEccCCceeccccccceeccceeccccccceeeeeeeccccc--cccccccceeeeecc
Confidence            777888888886 68999999999876433221                       2233333  334567899999999


Q ss_pred             CCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCce
Q psy10867        140 DGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGED  219 (343)
Q Consensus       140 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~  219 (343)
                      |+.|++||+++.+                      .+....++...+.++.++|++  .++++++.|+.|++||+++++.
T Consensus       180 d~~i~~~d~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~d~~i~i~d~~~~~~  235 (355)
T d1nexb2         180 DNTLIVWDVAQMK----------------------CLYILSGHTDRIYSTIYDHER--KRCISASMDTTIRIWDLENGEL  235 (355)
T ss_dssp             TSCEEEEETTTTE----------------------EEEEECCCSSCEEEEEEETTT--TEEEEEETTSCEEEEETTTCCE
T ss_pred             cceeeeeeccccc----------------------ceeeeeccccccccccccccc--eeeecccccceEEeeecccccc
Confidence            9999999998864                      444556788889999999998  7999999999999999999999


Q ss_pred             EEEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEE-EEccCCCEEEEE
Q psy10867        220 LLSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSL-SCSITGITLLSS  297 (343)
Q Consensus       220 ~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~s~~~~~l~s~  297 (343)
                      +..+. |...|.+++++  +++|++++.||.|++||+++...             .+..|...+.++ .++++++++++|
T Consensus       236 ~~~~~~h~~~v~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~l~~g  300 (355)
T d1nexb2         236 MYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSR-------------KFSYHHTNLSAITTFYVSDNILVSG  300 (355)
T ss_dssp             EEEECCCSSCCCEEEEC--SSEEEEECTTSEEEEEETTTCCE-------------EEEEECTTCCCCCEEEECSSEEEEE
T ss_pred             ccccccccccccccccc--cceeeeeecccccccccccccce-------------ecccccCCceEEEEEcCCCCEEEEE
Confidence            88887 67889999987  47999999999999999876432             344566666665 456677766665


Q ss_pred             eCCCcEEEEecccceeeee-cc-cCCceEEEEEccCCCeeeeccc
Q psy10867        298 SADETLKIWHTISRQCLRT-IQ-HKGPVLGAFLGLLPPAIHDYDF  340 (343)
Q Consensus       298 ~~dg~i~iwd~~~~~~~~~-~~-~~~~v~~~~~sp~~~~l~~~~~  340 (343)
                       .|+.|++||+++++++.. +. |.++|++++|+|+ ..+++++.
T Consensus       301 -~d~~i~vwd~~tg~~~~~~~~~~~~~V~~v~~~~~-~~~~~~s~  343 (355)
T d1nexb2         301 -SENQFNIYNLRSGKLVHANILKDADQIWSVNFKGK-TLVAAVEK  343 (355)
T ss_dssp             -ETTEEEEEETTTCCBCCSCTTTTCSEEEEEEEETT-EEEEEEES
T ss_pred             -eCCEEEEEECCCCCEEEEEecCCCCCEEEEEEcCC-eEEEEEEC
Confidence             589999999999998864 44 8899999999987 45555543

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.3e-38  Score=258.21  Aligned_cols=265  Identities=15%  Similarity=0.132  Sum_probs=205.6

Q ss_pred             CeEEEEecCC--ceEEEEEecCCCCcceEEEEeC--CceEEEEEcCCCeEEEEeCCCccccee--------cccCCcceE
Q psy10867         15 GAISVWEPKG--GTLLMSYKGASVLSPHSMCLLG--NDYVLGVEKGKPMIQAWPVNSQEKAQL--------RLICPGRIS   82 (343)
Q Consensus        15 g~i~iwd~~~--~~~~~~~~~~~~~~v~~~~~~~--~~~~~~~~~~~~~i~iw~~~~~~~~~~--------~~~~~~~v~   82 (343)
                      ..|+.|+...  ...+..+.+|....|++++|+|  ++.++++|+.||+|+|||+..++....        ...|.++|.
T Consensus        40 ~~i~~~~~~~~~~~~~~~~~gh~~~~v~~v~fsP~~~g~~lasgs~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~v~  119 (325)
T d1pgua1          40 AFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPIS  119 (325)
T ss_dssp             EEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEE
T ss_pred             EEEEEEeCCCCCccceEEEeCCCCCCEEEEEEeeCCCCCEEEEEeCCCCEEEeeecCCcceeeeecccccccccccCcEE
Confidence            3456677543  3457778888643899999998  568999999999999999877654422        335778999


Q ss_pred             EEEECCCCCEEEE-e--cCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCE-EEEecCCCeEEEeecCccceeeeee
Q psy10867         83 SMQASPDAAYIAV-S--IETKLHMWQISSGRLLATASSHYQPITIVKWSADSNF-IVTGGEDGTICVWQLSRLICKQTVA  158 (343)
Q Consensus        83 ~~~~s~~~~~l~~-~--~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~  158 (343)
                      +++|++++++|++ +  .++.+.+|+.++++.+..+.+|...|.+++|+|++.. +++++.|+.+++||....+...   
T Consensus       120 ~v~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~---  196 (325)
T d1pgua1         120 DISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSA---  196 (325)
T ss_dssp             EEEECTTSSEEEEEECCSSCSEEEEETTTCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEE---
T ss_pred             EEEECCCCCccceeeccccceEEEEeecccccceeeeecccccccccccccccceEEEeecccccccccccccccce---
Confidence            9999999998886 3  4678999999999999999999999999999998775 7789999999999998765433   


Q ss_pred             cCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEc--
Q psy10867        159 FGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFD--  235 (343)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~--  235 (343)
                                      .......|...|.+++|+|++. .++++++.|+.|++||+++++.+..+. +..++..+.|+  
T Consensus       197 ----------------~~~~~~~~~~~v~~v~~~pd~~-~~l~s~~~d~~i~iwd~~~~~~~~~l~~~~~~v~~~~~s~~  259 (325)
T d1pgua1         197 ----------------SDRTHHKQGSFVRDVEFSPDSG-EFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALS  259 (325)
T ss_dssp             ----------------EECSSSCTTCCEEEEEECSTTC-CEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEE
T ss_pred             ----------------ecccccCCCCccEEeeeccccc-eeccccccccceeeeeeccccccccccccccccccceeeee
Confidence                            2333456888999999999753 789999999999999999999998887 45555444444  


Q ss_pred             -CCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccC-CCEEEEEeCCCcEEEEec
Q psy10867        236 -GTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSIT-GITLLSSSADETLKIWHT  308 (343)
Q Consensus       236 -~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~s~~~dg~i~iwd~  308 (343)
                       |++++|++++.|+.|++||++..+....+         ....|...+..+++.+. +.+|++++.||.|++||+
T Consensus       260 ~~dg~~l~s~s~D~~i~iwd~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~l~s~s~dg~i~vwdl  325 (325)
T d1pgua1         260 WLDSQKFATVGADATIRVWDVTTSKCVQKW---------TLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYEL  325 (325)
T ss_dssp             ESSSSEEEEEETTSEEEEEETTTTEEEEEE---------ECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEET
T ss_pred             ccCCCEEEEEeCCCeEEEEECCCCCEEEEE---------EecCCcccCeEEEEEECCCCEEEEEECCCEEEEEEC
Confidence             68999999999999999999875543322         12222223333443332 347899999999999996

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-36  Score=246.31  Aligned_cols=291  Identities=18%  Similarity=0.239  Sum_probs=231.6

Q ss_pred             eEEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEE
Q psy10867          6 EVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQ   85 (343)
Q Consensus         6 ~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~   85 (343)
                      ..++|++.||.|+|||+.++++++++.+|.. .|.+++|+|+  ++++++.|+.+++|+............+...+....
T Consensus        28 ~~l~sgs~Dg~i~vWd~~~~~~~~~~~~h~~-~V~~v~~~~~--~l~s~s~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (342)
T d2ovrb2          28 NRIVSGSDDNTLKVWSAVTGKCLRTLVGHTG-GVWSSQMRDN--IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMH  104 (342)
T ss_dssp             TEEEEEETTSCEEEEETTTCCEEEECCCCSS-CEEEEEEETT--EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEE
T ss_pred             CEEEEEeCCCeEEEEECCCCCEEEEEeCCCC-CEEEEEeCCC--ccccceecccccccccccccceecccccceeEeeee
Confidence            4577888899999999999999999999999 9999999985  677777779999999988776665555666666655


Q ss_pred             ECCCCCEEEEecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCC
Q psy10867         86 ASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSS  165 (343)
Q Consensus        86 ~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~  165 (343)
                      .. +.....+..|+.+.+|+..+++....+..+.....  ...+....+++++.|+.|++||.....             
T Consensus       105 ~~-~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~d~~i~~~d~~~~~-------------  168 (342)
T d2ovrb2         105 LH-EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVR--CVQYDGRRVVSGAYDFMVKVWDPETET-------------  168 (342)
T ss_dssp             EE-TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEE--EEEECSSCEEEEETTSCEEEEEGGGTE-------------
T ss_pred             cc-cccccccccceeEEEeecccccceeeeecccccce--eeccccceeeeecCCCeEEEeecccce-------------
Confidence            44 34445567899999999999988877765554433  344567789999999999999998764             


Q ss_pred             CCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCCEEEEE
Q psy10867        166 GKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIYMG  244 (343)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~  244 (343)
                               .+..+.+|...+..+.+  ++  .++++++.||.|++||++.++.+..+. +...+.++.++  +++|+++
T Consensus       169 ---------~~~~~~~~~~~~~~~~~--~~--~~l~s~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~  233 (342)
T d2ovrb2         169 ---------CLHTLQGHTNRVYSLQF--DG--IHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSG  233 (342)
T ss_dssp             ---------EEEEECCCSSCEEEEEE--CS--SEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEE--TTEEEEE
T ss_pred             ---------eeEEEcCcccccccccC--CC--CEEEEEeCCCeEEEeecccceeeeEecccccceeEEecC--CCEEEEE
Confidence                     44455667766655544  55  689999999999999999999888777 56678777776  5699999


Q ss_pred             cCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc------
Q psy10867        245 TSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ------  318 (343)
Q Consensus       245 ~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~------  318 (343)
                      +.|+.|++||+........        ......|...+.++.++  ++++++|+.||.|++||+++++.++++.      
T Consensus       234 s~d~~i~iwd~~~~~~~~~--------~~~~~~~~~~~~~~~~~--~~~~~s~s~Dg~i~iwd~~tg~~i~~~~~~~~~~  303 (342)
T d2ovrb2         234 NADSTVKIWDIKTGQCLQT--------LQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGG  303 (342)
T ss_dssp             ETTSCEEEEETTTCCEEEE--------ECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEEECTTGG
T ss_pred             cCCCEEEEEeccccccccc--------ccccceeeeceeecccC--CCeeEEEcCCCEEEEEECCCCCEEEEEecccCCC
Confidence            9999999999887554332        22234566777777765  5699999999999999999999888763      


Q ss_pred             cCCceEEEEEccCCCeeeeccc
Q psy10867        319 HKGPVLGAFLGLLPPAIHDYDF  340 (343)
Q Consensus       319 ~~~~v~~~~~sp~~~~l~~~~~  340 (343)
                      |.+.|++++|+|++.+|++++-
T Consensus       304 ~~~~v~~v~~s~~~~~la~g~~  325 (342)
T d2ovrb2         304 SGGVVWRIRASNTKLVCAVGSR  325 (342)
T ss_dssp             GTCEEEEEEECSSEEEEEEECS
T ss_pred             CCCCEEEEEECCCCCEEEEEeC
Confidence            5678999999999999998764

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=3.5e-36  Score=244.94  Aligned_cols=293  Identities=10%  Similarity=0.023  Sum_probs=220.7

Q ss_pred             eEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccc---eecccCCcceEEEEECCCC-CEEEE-ecCCe
Q psy10867         26 TLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKA---QLRLICPGRISSMQASPDA-AYIAV-SIETK  100 (343)
Q Consensus        26 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~---~~~~~~~~~v~~~~~s~~~-~~l~~-~~d~~  100 (343)
                      +.++..++|++ .|++|+|+|++.+|++++.||+|+|||++.+...   .....|..+|.+++|+|++ .+|++ +.|+.
T Consensus         2 ~~v~~~~~h~d-~I~~l~fsp~~~~L~s~s~Dg~v~iwd~~~~~~~~~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~d~~   80 (342)
T d1yfqa_           2 QIVQIEQAPKD-YISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGE   80 (342)
T ss_dssp             EEEECSSCCSS-CEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSC
T ss_pred             CeEEcCCCCCC-CEEEEEEeCCCCEEEEEECCCeEEEEEccCCCcceEEEEecCCCCCEEEEEEeCCCCCEEEEcccccc
Confidence            45677788999 9999999999999999999999999998765443   2233799999999999875 46665 68999


Q ss_pred             EEEEEccCCceEEEecccCC-CeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeee
Q psy10867        101 LHMWQISSGRLLATASSHYQ-PITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVK  179 (343)
Q Consensus       101 i~v~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (343)
                      |++|++..+........+.. ......+.++...+++++.++.+++||++........                  ....
T Consensus        81 v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~------------------~~~~  142 (342)
T d1yfqa_          81 ILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIA------------------VKNL  142 (342)
T ss_dssp             EEEECSSSSSSEEECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEE------------------EEES
T ss_pred             eeeeecccccccccccccccccccccccccccccccccccccccceeeccccccceee------------------eccc
Confidence            99999998877776655544 3445566678889999999999999999765433221                  1111


Q ss_pred             cc--cccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEe----ecCCcEEEEEEcC-CCCEEEEEcCCCcEEE
Q psy10867        180 SQ--HSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSL----ILDTRLTCVAFDG-TEDNIYMGTSEGVIKS  252 (343)
Q Consensus       180 ~~--~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~----~~~~~i~~~~~~~-~~~~l~~~~~d~~i~i  252 (343)
                      ..  .........+.+.+  ..+++++.|+.|++||++..+.....    .......+..+.+ ++..+++++.||.+.+
T Consensus       143 ~~~~~~~~~~~~~~~~~~--~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~v  220 (342)
T d1yfqa_         143 NSNNTKVKNKIFTMDTNS--SRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAV  220 (342)
T ss_dssp             CSSSSSSCCCEEEEEECS--SEEEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEE
T ss_pred             ccccccceeeeeeeeccC--CceeeecCCCcEEEEecccCcccceeeeecccccceeeeEeecCCCCEEEeecCCCeEEE
Confidence            11  22334556677777  78999999999999999876643322    2344555555554 6778999999999999


Q ss_pred             EEeeccccccccc----ccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecccCCceEEEEE
Q psy10867        253 FCLRQVPRTRDHH----IQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQHKGPVLGAFL  328 (343)
Q Consensus       253 ~d~~~~~~~~~~~----~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~  328 (343)
                      |+...........    ...........+|...+++++|+|++++||+|+.||.|++||+.+++.+.++.....+..++|
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~lasg~~Dg~v~vWD~~~~~~l~~~~~~~~~~~~~~  300 (342)
T d1yfqa_         221 EFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKI  300 (342)
T ss_dssp             EECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEE
T ss_pred             EEecCCcceeeccccceeeeeeeccCCCcccccceeEEecCCccEEEEECCCCEEEEEECCCCcEEEEecCCCCCEEEEE
Confidence            9987644332211    011112333456778899999999999999999999999999999999999875566777899


Q ss_pred             ccCCCeeeecc
Q psy10867        329 GLLPPAIHDYD  339 (343)
Q Consensus       329 sp~~~~l~~~~  339 (343)
                      +|++++|++++
T Consensus       301 s~~~~~l~~a~  311 (342)
T d1yfqa_         301 ACSDNILCLAT  311 (342)
T ss_dssp             EECSSEEEEEE
T ss_pred             EeCCCEEEEEE
Confidence            99999998865

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.9e-35  Score=241.96  Aligned_cols=291  Identities=16%  Similarity=0.141  Sum_probs=216.4

Q ss_pred             EEEEecCCCCcc-eEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEEecCCeEEEEEc
Q psy10867         28 LMSYKGASVLSP-HSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQI  106 (343)
Q Consensus        28 ~~~~~~~~~~~v-~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~  106 (343)
                      ..++++|.. .| +|+++  ++.+|++|+.||+|+|||+.+++.+..+.+|.+.|.+++|+|++.+++++.|+.|++|++
T Consensus         5 ~~tL~GH~~-~vitc~~~--~~~~l~tgs~Dg~i~vWd~~~~~~~~~l~~H~~~V~~l~~s~~~~l~s~s~D~~i~iw~~   81 (355)
T d1nexb2           5 RTTLRGHMT-SVITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGILVSGSTDRTVRVWDI   81 (355)
T ss_dssp             EEEEECCSS-SCEEEEEE--ETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEEETTTEEEEEETTCCEEEEET
T ss_pred             cEEECCcCC-CcEEEEEE--CCCEEEEEeCCCeEEEEECCCCcEEEEEECCCCCEEEEEEcCCCEEEEEecccccccccc
Confidence            457899987 65 56655  567888888889999999999999999999999999999998765555589999999999


Q ss_pred             cCCceEEEecccCC--CeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCC-CCCccccccceeeeecccc
Q psy10867        107 SSGRLLATASSHYQ--PITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGS-SGKGVTGLTEPLHVKSQHS  183 (343)
Q Consensus       107 ~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  183 (343)
                      ...+.......+..  ......+.+++.++++++.|+.|++||+++.............. .................|.
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (355)
T d1nexb2          82 KKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHM  161 (355)
T ss_dssp             TTTEEEEEECCCSSCEEEEEEEEETTEEEEEEEETTSEEEEEECCC-----------CCCEEESCTTTCTTEEEEEECCS
T ss_pred             cccccccccccccccccccccccccccceeeeecCCCcEEEEEccCCceeccccccceeccceeccccccceeeeeeecc
Confidence            98887766654433  34556678889999999999999999998765433221110000 0000011112333444455


Q ss_pred             cceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccc
Q psy10867        184 LPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTR  262 (343)
Q Consensus       184 ~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~  262 (343)
                      ..+..  +.+++  .+++++..|+.+++||+++++.+.... +...+.++.++|+++++++++.|+.|++||+++...  
T Consensus       162 ~~v~~--~~~~~--~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~i~d~~~~~~--  235 (355)
T d1nexb2         162 ASVRT--VSGHG--NIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGEL--  235 (355)
T ss_dssp             SCEEE--EEEET--TEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTCCE--
T ss_pred             ccccc--ccccc--ceeeeecccceeeeeecccccceeeeeccccccccccccccceeeecccccceEEeeecccccc--
Confidence            55544  44555  689999999999999999998887776 677899999999999999999999999999887543  


Q ss_pred             cccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecccCCceEE-EEEccCCCeeeecc
Q psy10867        263 DHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQHKGPVLG-AFLGLLPPAIHDYD  339 (343)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~-~~~sp~~~~l~~~~  339 (343)
                               +..+.+|...|.++++++  ++|++++.||.|++||+.++...... |...+.. ..+++++++|++++
T Consensus       236 ---------~~~~~~h~~~v~~~~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~g~  301 (355)
T d1nexb2         236 ---------MYTLQGHTALVGLLRLSD--KFLVSAAADGSIRGWDANDYSRKFSY-HHTNLSAITTFYVSDNILVSGS  301 (355)
T ss_dssp             ---------EEEECCCSSCCCEEEECS--SEEEEECTTSEEEEEETTTCCEEEEE-ECTTCCCCCEEEECSSEEEEEE
T ss_pred             ---------cccccccccccccccccc--ceeeeeecccccccccccccceeccc-ccCCceEEEEEcCCCCEEEEEe
Confidence                     456778999999999864  69999999999999999887655444 4444444 45677887777664

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2e-35  Score=239.42  Aligned_cols=269  Identities=13%  Similarity=0.109  Sum_probs=205.0

Q ss_pred             cceEEEEeCCceEEEEEcCCC-eEEEEeCCCccc--ceecccC-CcceEEEEECC--CCCEEEE-ecCCeEEEEEccCCc
Q psy10867         38 SPHSMCLLGNDYVLGVEKGKP-MIQAWPVNSQEK--AQLRLIC-PGRISSMQASP--DAAYIAV-SIETKLHMWQISSGR  110 (343)
Q Consensus        38 ~v~~~~~~~~~~~~~~~~~~~-~i~iw~~~~~~~--~~~~~~~-~~~v~~~~~s~--~~~~l~~-~~d~~i~v~~~~~~~  110 (343)
                      .+++++|+|++..++.+..+. .|+.|+....+.  ...+.+| ...|++++|+|  ++++|++ +.||+|++||+..++
T Consensus        19 ~~t~l~~~~~~~~la~~~~~~~~i~~~~~~~~~~~~~~~~~gh~~~~v~~v~fsP~~~g~~lasgs~Dg~i~iWd~~~~~   98 (325)
T d1pgua1          19 FTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDK   98 (325)
T ss_dssp             CCCCCEEETTTTEEEEEETTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEG
T ss_pred             CeEEEEECCCCCEEEEEeCCCEEEEEEeCCCCCccceEEEeCCCCCCEEEEEEeeCCCCCEEEEEeCCCCEEEeeecCCc
Confidence            667899999998888776532 355666544332  3344455 46799999998  5679987 679999999987653


Q ss_pred             e--------EEEecccCCCeEEEEEecCCCEEEEecC--CCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeec
Q psy10867        111 L--------LATASSHYQPITIVKWSADSNFIVTGGE--DGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKS  180 (343)
Q Consensus       111 ~--------~~~~~~~~~~v~~~~~~~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (343)
                      .        ...+..|.++|.+++|+++++++++++.  ++.+++|+.++++                      .+..+.
T Consensus        99 ~~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~  156 (325)
T d1pgua1          99 ESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGN----------------------SLGEVS  156 (325)
T ss_dssp             GGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCC----------------------EEEECC
T ss_pred             ceeeeecccccccccccCcEEEEEECCCCCccceeeccccceEEEEeecccc----------------------cceeee
Confidence            2        2234568899999999999999887764  6779999998764                      455667


Q ss_pred             ccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee----cCCcEEEEEEcCC-CCEEEEEcCCCcEEEEEe
Q psy10867        181 QHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI----LDTRLTCVAFDGT-EDNIYMGTSEGVIKSFCL  255 (343)
Q Consensus       181 ~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~----~~~~i~~~~~~~~-~~~l~~~~~d~~i~i~d~  255 (343)
                      +|...|.+++|+|+++ .++++++.|+.+++||.+..+......    +...|.+++|+|+ +.++++++.|+.|++||+
T Consensus       157 ~h~~~v~~~~~~~~~~-~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~v~~v~~~pd~~~~l~s~~~d~~i~iwd~  235 (325)
T d1pgua1         157 GHSQRINACHLKQSRP-MRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDG  235 (325)
T ss_dssp             SCSSCEEEEEECSSSS-CEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEET
T ss_pred             eccccccccccccccc-ceEEEeecccccccccccccccceecccccCCCCccEEeeeccccceeccccccccceeeeee
Confidence            8999999999999884 467889999999999998887766654    4567999999996 688999999999999998


Q ss_pred             ecccccccccccCCCCCCccccccCcEEEEEEc---cCCCEEEEEeCCCcEEEEecccceeeeecc-cCC--ceEEEEEc
Q psy10867        256 RQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCS---ITGITLLSSSADETLKIWHTISRQCLRTIQ-HKG--PVLGAFLG  329 (343)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s---~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~--~v~~~~~s  329 (343)
                      ++...           +..+.+|..++..+.|+   |++++|++++.|+.|+|||+++++++..+. +..  .+..+++.
T Consensus       236 ~~~~~-----------~~~l~~~~~~v~~~~~s~~~~dg~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~  304 (325)
T d1pgua1         236 KSGEF-----------LKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVV  304 (325)
T ss_dssp             TTCCE-----------EEECCBTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEE
T ss_pred             ccccc-----------cccccccccccccceeeeeccCCCEEEEEeCCCeEEEEECCCCCEEEEEEecCCcccCeEEEEE
Confidence            76543           44566677666555554   689999999999999999999999998876 333  33344443


Q ss_pred             cC-CCeeeeccc
Q psy10867        330 LL-PPAIHDYDF  340 (343)
Q Consensus       330 p~-~~~l~~~~~  340 (343)
                      +. +.+|++++.
T Consensus       305 ~~~~~~l~s~s~  316 (325)
T d1pgua1         305 ATGNGRIISLSL  316 (325)
T ss_dssp             EEETTEEEEEET
T ss_pred             ECCCCEEEEEEC
Confidence            32 236777664

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2.2e-36  Score=251.58  Aligned_cols=301  Identities=16%  Similarity=0.182  Sum_probs=209.8

Q ss_pred             EEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccc------eecccCCcceEEEE------ECC-CCCEEEE
Q psy10867         29 MSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKA------QLRLICPGRISSMQ------ASP-DAAYIAV   95 (343)
Q Consensus        29 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~------~~~~~~~~~v~~~~------~s~-~~~~l~~   95 (343)
                      ...++|.. .|.++++++  .++++++.|++|+|||..+.+..      .....|...+..+.      .+. ++.++++
T Consensus         8 ~~~~~H~~-~I~~v~~~~--~~l~S~S~D~~iriWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s   84 (393)
T d1sq9a_           8 NAGKAHDA-DIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVAT   84 (393)
T ss_dssp             EESSCSSS-CEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEE
T ss_pred             ecCCcccC-ccEEEEEeC--CEEEEEECCCeEEEEECCCCCCCcccceeEeeeeccCCceEeeeEeeeccCCCCCcEEEE
Confidence            45678999 999999875  46677777899999997654421      11123343333322      222 2245555


Q ss_pred             -ecCCeEEEEEccCCceEE-----Ee-----cccCCCeEEEEEecC-----CCEEEEecCCCeEEEeecCccceeeeeec
Q psy10867         96 -SIETKLHMWQISSGRLLA-----TA-----SSHYQPITIVKWSAD-----SNFIVTGGEDGTICVWQLSRLICKQTVAF  159 (343)
Q Consensus        96 -~~d~~i~v~~~~~~~~~~-----~~-----~~~~~~v~~~~~~~~-----~~~l~s~~~dg~i~iwd~~~~~~~~~~~~  159 (343)
                       +.||.|++|++.......     ..     ..+...+..++|.++     +.++++++.||.+++|++.......... 
T Consensus        85 ~~~dg~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~~~~~~~-  163 (393)
T d1sq9a_          85 TSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSL-  163 (393)
T ss_dssp             EETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHT-
T ss_pred             EeCCCcEEEEEccCCCceeeeeccccceeeeccCCCceEEEEEecCCCcccccEEEEEcCCCcEEEEEeecCCccccee-
Confidence             679999999986543211     11     134556788888774     4688999999999999986432111000 


Q ss_pred             CCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-------cCCcEEEE
Q psy10867        160 GIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-------LDTRLTCV  232 (343)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-------~~~~i~~~  232 (343)
                         ...................+...+.+++|+|++   +|++|+.|++|++||+++++.+..+.       |..+|.++
T Consensus       164 ---~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg---~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~l~~h~~~V~~l  237 (393)
T d1sq9a_         164 ---TLNWSPTLELQGTVESPMTPSQFATSVDISERG---LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSV  237 (393)
T ss_dssp             ---TTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS---EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEE
T ss_pred             ---eeeeccceecccceecccCCCCcEEEEEECCCC---EEEEEeCCCcEEEEeecccccccccccccccccccceEEEc
Confidence               000000000011223334456678999999986   78999999999999999998876654       56789999


Q ss_pred             EEcCCCCEEEEEcCCCc---EEEEEeecccccccccc--cCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEe
Q psy10867        233 AFDGTEDNIYMGTSEGV---IKSFCLRQVPRTRDHHI--QDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWH  307 (343)
Q Consensus       233 ~~~~~~~~l~~~~~d~~---i~i~d~~~~~~~~~~~~--~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd  307 (343)
                      +|+|++++|++|+.|+.   |++||++.......+..  ........+.+|...|++++|+|++++|++++.|++|++||
T Consensus       238 ~~spdg~~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~fspd~~~l~S~s~D~~v~vWd  317 (393)
T d1sq9a_         238 KFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWD  317 (393)
T ss_dssp             EECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEE
T ss_pred             ccccccceeeeecCCCCcceeeecccccceeeeeeccccccccceeeeecccCceeeeccCCCCCeeEEECCCCEEEEEE
Confidence            99999999999998874   89999987655443321  12233455678999999999999999999999999999999


Q ss_pred             cccceeeeecc-cCCceE----EEEEccCCCeeeecc
Q psy10867        308 TISRQCLRTIQ-HKGPVL----GAFLGLLPPAIHDYD  339 (343)
Q Consensus       308 ~~~~~~~~~~~-~~~~v~----~~~~sp~~~~l~~~~  339 (343)
                      +++++++.+++ |.+.|.    .++|+|++..+++++
T Consensus       318 ~~~g~~~~~l~gH~~~v~~~~~~~~~~~~~~~~~~~~  354 (393)
T d1sq9a_         318 VKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPG  354 (393)
T ss_dssp             TTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCC
T ss_pred             CCCCCEEEEECCcCCcccCCccEEEECCCCCEEEEcc
Confidence            99999999998 877765    478888888877654

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.2e-34  Score=226.69  Aligned_cols=265  Identities=19%  Similarity=0.265  Sum_probs=208.2

Q ss_pred             ceEEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEE
Q psy10867          5 NEVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSM   84 (343)
Q Consensus         5 ~~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~   84 (343)
                      ...++|++.||.|+|||+.++++++++++|.. .|.+++|  ++.++++++.|+.|++|++..+........+...... 
T Consensus        25 ~~~l~sgs~Dg~i~vWd~~~~~~~~~l~~H~~-~V~~v~~--~~~~l~s~s~D~~i~~~~~~~~~~~~~~~~~~~~~~~-  100 (293)
T d1p22a2          25 DQKIVSGLRDNTIKIWDKNTLECKRILTGHTG-SVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLH-  100 (293)
T ss_dssp             SSEEEEEESSSCEEEEESSSCCEEEEECCCSS-CEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEE-
T ss_pred             CCEEEEEeCCCeEEEEECCCCcEEEEEecCCC-CEeeeec--ccceeeccccccccccccccccccccccccccccccc-
Confidence            35678889999999999999999999999999 9999886  5678888888899999999988776555444333332 


Q ss_pred             EECCCCCEEEEecCCeEEEEEccCCce---EEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCC
Q psy10867         85 QASPDAAYIAVSIETKLHMWQISSGRL---LATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGI  161 (343)
Q Consensus        85 ~~s~~~~~l~~~~d~~i~v~~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~  161 (343)
                      ...+.+.++.+..++.+.+|+..+...   ...+..|...+..+.+.  ...+++++.|+.|++||+++.+         
T Consensus       101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~~~s~d~~i~~~d~~~~~---------  169 (293)
T d1p22a2         101 LRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWNTSTCE---------  169 (293)
T ss_dssp             EECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTTCC---------
T ss_pred             ccccccceeecccccceeEeeccccccccccccccccccccccceec--ccccccccCCCceeeecCCCCc---------
Confidence            333344455557899999999887643   44566788888887775  4578899999999999998864         


Q ss_pred             CCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeec-CCcEEEEEEcCCCCE
Q psy10867        162 PGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLIL-DTRLTCVAFDGTEDN  240 (343)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~-~~~i~~~~~~~~~~~  240 (343)
                                   .+..+.++...+..+.+++    ..+++++.|+.|++||+++.+.+..... ...+.  .+++++.+
T Consensus       170 -------------~~~~~~~~~~~v~~~~~~~----~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~--~~~~~~~~  230 (293)
T d1p22a2         170 -------------FVRTLNGHKRGIACLQYRD----RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR--CIRFDNKR  230 (293)
T ss_dssp             -------------EEEEEECCSSCEEEEEEET----TEEEEEETTSCEEEEETTTCCEEEEECCCSSCEE--EEECCSSE
T ss_pred             -------------EEEEEcccccccccccCCC----CeEEEecCCCEEEEEecccceeeeeecccceeee--eccccceE
Confidence                         4455567888888877764    5799999999999999999998887774 44454  46678899


Q ss_pred             EEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEe
Q psy10867        241 IYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWH  307 (343)
Q Consensus       241 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd  307 (343)
                      |++|+.||.|++||+.........  ....++..+.+|.+.|++++|+  +++|++++.||+|++||
T Consensus       231 l~sg~~dg~i~iwd~~~~~~~~~~--~~~~~~~~~~~H~~~V~~v~~d--~~~l~s~s~Dg~i~iWD  293 (293)
T d1p22a2         231 IVSGAYDGKIKVWDLVAALDPRAP--AGTLCLRTLVEHSGRVFRLQFD--EFQIVSSSHDDTILIWD  293 (293)
T ss_dssp             EEEEETTSCEEEEEHHHHTSTTSC--TTTTEEEEECCCSSCCCCEEEC--SSCEEECCSSSEEEEEC
T ss_pred             EEEEcCCCEEEEEECCCCcccccc--CCceeeEEecCCCCCEEEEEEc--CCEEEEEecCCEEEEeC
Confidence            999999999999999875443321  1223356678899999999984  56899999999999998

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2.3e-34  Score=229.22  Aligned_cols=262  Identities=16%  Similarity=0.135  Sum_probs=204.8

Q ss_pred             CceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEEecCCeEEE
Q psy10867         24 GGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIETKLHM  103 (343)
Q Consensus        24 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~d~~i~v  103 (343)
                      +.++++++++|.. +|++++|+|    |++|+.||+|++||+.++.     ..|...|.++++++++.++.++.|+++++
T Consensus         2 ~~~~i~~l~gH~~-~I~~l~~s~----l~sgs~Dg~v~~Wd~~~~~-----~~h~~~V~~~~~~~~~~~~s~s~D~~v~~   71 (287)
T d1pgua2           2 HDEVLKTISGHNK-GITALTVNP----LISGSYDGRIMEWSSSSMH-----QDHSNLIVSLDNSKAQEYSSISWDDTLKV   71 (287)
T ss_dssp             EEEEEEEECCCSS-CEEEEETTT----TEEEETTSCEEETTTTEEE-----CCCCSCEEEEECCSTTCCEEEETTTEEEE
T ss_pred             CcceeEEECCCCC-ceEEEEECc----EEEEeCCCeEEEEECCCCC-----CCCCCCEEEEEecCCCeEEEEeecccccc
Confidence            3578999999999 999999988    7778888999999987653     47889999999998887777789999999


Q ss_pred             EEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccc
Q psy10867        104 WQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHS  183 (343)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (343)
                      |++...+       ....+.++.+++++..++++. ++.+.+|+..++.....+                      . +.
T Consensus        72 w~~~~~~-------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~----------------------~-~~  120 (287)
T d1pgua2          72 NGITKHE-------FGSQPKVASANNDGFTAVLTN-DDDLLILQSFTGDIIKSV----------------------R-LN  120 (287)
T ss_dssp             TTEEEEE-------CSSCEEEEEECSSSEEEEEET-TSEEEEEETTTCCEEEEE----------------------E-CS
T ss_pred             ccccccc-------cccceeeeeeccCCceEEEee-cccceeeeccceeeeeec----------------------c-cc
Confidence            9975421       234577888988887777655 567888988876544332                      1 22


Q ss_pred             cceEEEEeecCCCceEEEEeeCC-CeEEEEecCCCceEEEee--cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccc
Q psy10867        184 LPVTHVTLSKLGAKSRVASVSHD-RTCKIFDLCTGEDLLSLI--LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPR  260 (343)
Q Consensus       184 ~~v~~~~~~~~~~~~~l~~~~~d-~~i~~wd~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~  260 (343)
                      ..  ..++++++  ..+++++.+ +.+++|++...+......  +...+.+++|+|++++|++|+.||.|++||+.....
T Consensus       121 ~~--~~~~~~~~--~~~~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~  196 (287)
T d1pgua2         121 SP--GSAVSLSQ--NYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREV  196 (287)
T ss_dssp             SC--EEEEEECS--SEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE
T ss_pred             ce--eeeeeccC--cceeeeccccceeeeeeccccceeeeeeeccCCceeEEEeccCccccccccccccccceeeccccc
Confidence            23  34566666  566666665 579999998776655554  567899999999999999999999999999976543


Q ss_pred             cccccccCCCCCCccccccCcEEEEEEccC----------CCEEEEEeCCCcEEEEeccc-ceeeeecc-cCCceEEEEE
Q psy10867        261 TRDHHIQDSTSNPDFIGHEKQVTSLSCSIT----------GITLLSSSADETLKIWHTIS-RQCLRTIQ-HKGPVLGAFL  328 (343)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~----------~~~l~s~~~dg~i~iwd~~~-~~~~~~~~-~~~~v~~~~~  328 (343)
                      .          ...+.+|...|.+++|+|+          +.+|++|+.|+.|++||+++ ++.+..+. |.+.|++++|
T Consensus       197 ~----------~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~l~sgs~D~~i~iw~~~~~~~~~~~~~~h~~~V~~v~~  266 (287)
T d1pgua2         197 K----------TSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLW  266 (287)
T ss_dssp             E----------ECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEE
T ss_pred             c----------cccccccccccceeeecccccccccccCCCCeeEeecCCCeEEEEECCCCCeEEEEeCCCCCCeEEEEE
Confidence            2          2235679999999999875          46899999999999999976 55666666 9999999999


Q ss_pred             ccCCCeeeecccC
Q psy10867        329 GLLPPAIHDYDFT  341 (343)
Q Consensus       329 sp~~~~l~~~~~~  341 (343)
                      +|++. |++++..
T Consensus       267 ~~~~~-l~s~g~D  278 (287)
T d1pgua2         267 ETPST-LVSSGAD  278 (287)
T ss_dssp             EETTE-EEEEETT
T ss_pred             CCCCE-EEEEECC
Confidence            99875 6666543

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2.7e-34  Score=228.77  Aligned_cols=250  Identities=18%  Similarity=0.218  Sum_probs=200.6

Q ss_pred             EEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEEC
Q psy10867          8 AFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQAS   87 (343)
Q Consensus         8 ~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s   87 (343)
                      ++|++.||+|++||+.++     ...|.. .|.++++++++.+++++. |+++++|++...+       ....+..+.++
T Consensus        24 l~sgs~Dg~v~~Wd~~~~-----~~~h~~-~V~~~~~~~~~~~~s~s~-D~~v~~w~~~~~~-------~~~~~~~~~~~   89 (287)
T d1pgua2          24 LISGSYDGRIMEWSSSSM-----HQDHSN-LIVSLDNSKAQEYSSISW-DDTLKVNGITKHE-------FGSQPKVASAN   89 (287)
T ss_dssp             TEEEETTSCEEETTTTEE-----ECCCCS-CEEEEECCSTTCCEEEET-TTEEEETTEEEEE-------CSSCEEEEEEC
T ss_pred             EEEEeCCCeEEEEECCCC-----CCCCCC-CEEEEEecCCCeEEEEee-ccccccccccccc-------cccceeeeeec
Confidence            578889999999998764     357888 999999998877655554 5899999976533       23457788999


Q ss_pred             CCCCEEEEecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCC-eEEEeecCccceeeeeecCCCCCCC
Q psy10867         88 PDAAYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDG-TICVWQLSRLICKQTVAFGIPGSSG  166 (343)
Q Consensus        88 ~~~~~l~~~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg-~i~iwd~~~~~~~~~~~~~~~~~~~  166 (343)
                      +++..++.+.++.+.+|+..+++.+..+..+ ..+  .++++++..+++++.++ .+++|++......            
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~v~~~~~~~v~~~~~~~~~~~------------  154 (287)
T d1pgua2          90 NDGFTAVLTNDDDLLILQSFTGDIIKSVRLN-SPG--SAVSLSQNYVAVGLEEGNTIQVFKLSDLEVS------------  154 (287)
T ss_dssp             SSSEEEEEETTSEEEEEETTTCCEEEEEECS-SCE--EEEEECSSEEEEEETTTSCEEEEETTEEEEE------------
T ss_pred             cCCceEEEeecccceeeeccceeeeeecccc-cee--eeeeccCcceeeeccccceeeeeecccccee------------
Confidence            9999999988999999999999888877644 333  45677788888777665 7999998765332            


Q ss_pred             CccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEe--ecCCcEEEEEEcCC-------
Q psy10867        167 KGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSL--ILDTRLTCVAFDGT-------  237 (343)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~--~~~~~i~~~~~~~~-------  237 (343)
                               ......|...+++++|+|++  .+|++++.||.|++||+.+++.....  .|..+|.+++|+|.       
T Consensus       155 ---------~~~~~~~~~~v~~~~~s~~~--~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~  223 (287)
T d1pgua2         155 ---------FDLKTPLRAKPSYISISPSE--TYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEE  223 (287)
T ss_dssp             ---------EECSSCCSSCEEEEEECTTS--SEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------
T ss_pred             ---------eeeeeccCCceeEEEeccCc--cccccccccccccceeecccccccccccccccccceeeecccccccccc
Confidence                     22234577889999999999  89999999999999999988766543  26788999999874       


Q ss_pred             ---CCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEec
Q psy10867        238 ---EDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHT  308 (343)
Q Consensus       238 ---~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~  308 (343)
                         +.++++|+.|+.|++||++....          .+..+.+|...|++++|+|++ .|++++.|+.|++|++
T Consensus       224 ~~~~~~l~sgs~D~~i~iw~~~~~~~----------~~~~~~~h~~~V~~v~~~~~~-~l~s~g~D~~v~iW~i  286 (287)
T d1pgua2         224 EIEEDLVATGSLDTNIFIYSVKRPMK----------IIKALNAHKDGVNNLLWETPS-TLVSSGADACIKRWNV  286 (287)
T ss_dssp             CCSCCEEEEEETTSCEEEEESSCTTC----------CEEETTSSTTCEEEEEEEETT-EEEEEETTSCEEEEEE
T ss_pred             cCCCCeeEeecCCCeEEEEECCCCCe----------EEEEeCCCCCCeEEEEECCCC-EEEEEECCCeEEEEEE
Confidence               46899999999999999876332          144567899999999999986 5889999999999996

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=9.7e-34  Score=235.55  Aligned_cols=261  Identities=15%  Similarity=0.179  Sum_probs=187.8

Q ss_pred             eEEEecCCCCeEEEEecCCce------EEEEEecCCCCcceEEEEe------C-CceEEEEEcCCCeEEEEeCCCcccce
Q psy10867          6 EVAFSYDGSGAISVWEPKGGT------LLMSYKGASVLSPHSMCLL------G-NDYVLGVEKGKPMIQAWPVNSQEKAQ   72 (343)
Q Consensus         6 ~~~~s~~~dg~i~iwd~~~~~------~~~~~~~~~~~~v~~~~~~------~-~~~~~~~~~~~~~i~iw~~~~~~~~~   72 (343)
                      ..++|+++|++|+|||..+.+      .......|.. .+..+...      + ++.++++++.||.|++|++.......
T Consensus        25 ~~l~S~S~D~~iriWd~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~s~~~dg~v~~w~~~~~~~~~  103 (393)
T d1sq9a_          25 SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKS-GLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETK  103 (393)
T ss_dssp             SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTT-CEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTC
T ss_pred             CEEEEEECCCeEEEEECCCCCCCcccceeEeeeeccC-CceEeeeEeeeccCCCCCcEEEEEeCCCcEEEEEccCCCcee
Confidence            456788889999999976542      2233333443 33333221      1 34677788888999999976543321


Q ss_pred             ec----------ccCCcceEEEEECCCC-----CEEEE-ecCCeEEEEEccCCc------------------eEEEeccc
Q psy10867         73 LR----------LICPGRISSMQASPDA-----AYIAV-SIETKLHMWQISSGR------------------LLATASSH  118 (343)
Q Consensus        73 ~~----------~~~~~~v~~~~~s~~~-----~~l~~-~~d~~i~v~~~~~~~------------------~~~~~~~~  118 (343)
                      ..          ..+...+..++|.+++     .++++ +.|+.+++|++....                  .......+
T Consensus       104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (393)
T d1sq9a_         104 KVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTP  183 (393)
T ss_dssp             CEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSS
T ss_pred             eeeccccceeeeccCCCceEEEEEecCCCcccccEEEEEcCCCcEEEEEeecCCcccceeeeeeccceecccceecccCC
Confidence            11          1344567788887653     45554 789999999985321                  01112245


Q ss_pred             CCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCce
Q psy10867        119 YQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKS  198 (343)
Q Consensus       119 ~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~  198 (343)
                      ...+.+++|+|++ +|++|+.||.|++||+.+++....+.                ....+.+|..+|.+++|+|++  +
T Consensus       184 ~~~~~~v~~s~dg-~lasgs~Dg~i~iwd~~~~~~~~~~~----------------~~~~l~~h~~~V~~l~~spdg--~  244 (393)
T d1sq9a_         184 SQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFE----------------SQHSMINNSNSIRSVKFSPQG--S  244 (393)
T ss_dssp             CCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEE----------------CCC---CCCCCEEEEEECSST--T
T ss_pred             CCcEEEEEECCCC-EEEEEeCCCcEEEEeecccccccccc----------------cccccccccceEEEccccccc--c
Confidence            5678999999987 89999999999999999987766554                556677899999999999999  8


Q ss_pred             EEEEeeCCC---eEEEEecCCCceEEEee--------------cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeeccccc
Q psy10867        199 RVASVSHDR---TCKIFDLCTGEDLLSLI--------------LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRT  261 (343)
Q Consensus       199 ~l~~~~~d~---~i~~wd~~~~~~~~~~~--------------~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~  261 (343)
                      +|++|+.|+   .|++||+++++.+..+.              |...|++++|+|++++|++|+.|++|++||+++++. 
T Consensus       245 ~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~fspd~~~l~S~s~D~~v~vWd~~~g~~-  323 (393)
T d1sq9a_         245 LLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKER-  323 (393)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEE-
T ss_pred             eeeeecCCCCcceeeecccccceeeeeeccccccccceeeeecccCceeeeccCCCCCeeEEECCCCEEEEEECCCCCE-
Confidence            999999886   59999999998887763              667899999999999999999999999999987654 


Q ss_pred             ccccccCCCCCCccccccCcEE----EEEEccCCCEEEEE
Q psy10867        262 RDHHIQDSTSNPDFIGHEKQVT----SLSCSITGITLLSS  297 (343)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~~~v~----~~~~s~~~~~l~s~  297 (343)
                                +..+.+|.+.|.    .++|+|++..++++
T Consensus       324 ----------~~~l~gH~~~v~~~~~~~~~~~~~~~~~~~  353 (393)
T d1sq9a_         324 ----------ITTLNMHCDDIEIEEDILAVDEHGDSLAEP  353 (393)
T ss_dssp             ----------EEEEECCGGGCSSGGGCCCBCTTSCBCSSC
T ss_pred             ----------EEEECCcCCcccCCccEEEECCCCCEEEEc
Confidence                      445666766554    35666666655543

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=100.00  E-value=3.1e-33  Score=229.59  Aligned_cols=274  Identities=13%  Similarity=0.081  Sum_probs=209.6

Q ss_pred             eEEEec-CC-------CCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEc-CC-CeEEEEeCCCcccceecc
Q psy10867          6 EVAFSY-DG-------SGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEK-GK-PMIQAWPVNSQEKAQLRL   75 (343)
Q Consensus         6 ~~~~s~-~~-------dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~-~~i~iw~~~~~~~~~~~~   75 (343)
                      ..-||| ||       +|.|++||..+++.++.  .|.. .|.+++|+|||+.++.++ ++ ..|++||.++++..+ +.
T Consensus         7 ~~~fSP~dG~~~a~~~~g~v~v~d~~~~~~~~~--~~~~-~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~~~~~-~~   82 (360)
T d1k32a3           7 AEDFSPLDGDLIAFVSRGQAFIQDVSGTYVLKV--PEPL-RIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAEK-FE   82 (360)
T ss_dssp             EEEEEECGGGCEEEEETTEEEEECTTSSBEEEC--SCCS-CEEEEEECSSSEEEEEEEETTEEEEEEEETTTCCEEE-CC
T ss_pred             cccccCCCCCEEEEEECCeEEEEECCCCcEEEc--cCCC-CEEEEEECCCCCEEEEEEcCCCCEEEEEECCCCcEEE-ee
Confidence            345676 55       58999999988876653  5777 999999999998776544 33 379999999877554 55


Q ss_pred             cCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEe----------cCCCeEE
Q psy10867         76 ICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTG----------GEDGTIC  144 (343)
Q Consensus        76 ~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~----------~~dg~i~  144 (343)
                      .|...|.+++|+||+++|++ +.++.+++|++.+++....+..|...+.+++|+|++++|+.+          ..++.++
T Consensus        83 ~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~~~~~~~~~~~~~~~~~  162 (360)
T d1k32a3          83 ENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIH  162 (360)
T ss_dssp             CCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEE
T ss_pred             CCCceEEeeeecccccccceeccccccccccccccceeeeeecccccccchhhccceeeeeeeccccccceeecccccee
Confidence            88999999999999999997 688999999999999999999999999999999999999854          3456799


Q ss_pred             EeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCce-----
Q psy10867        145 VWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGED-----  219 (343)
Q Consensus       145 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~-----  219 (343)
                      +||+.+++                       ...+..+...+..++|+|++  +.|++++.++.+.+||......     
T Consensus       163 v~d~~~~~-----------------------~~~~~~~~~~~~~~~~spdg--~~l~~~s~~~~~~~~d~~~~~~~~~~~  217 (360)
T d1k32a3         163 VYDMEGRK-----------------------IFAATTENSHDYAPAFDADS--KNLYYLSYRSLDPSPDRVVLNFSFEVV  217 (360)
T ss_dssp             EEETTTTE-----------------------EEECSCSSSBEEEEEECTTS--CEEEEEESCCCCCEECSSSSCEECCSC
T ss_pred             eeccccCc-----------------------eeeecccccccccccccCCC--CEEEEEeCCCceEcccccccceeeccc
Confidence            99998863                       33344577788999999999  7999999999999998654321     


Q ss_pred             --EEEee-------------------------------------cCCcEEEEEEcCCCC-------------EEEEEcCC
Q psy10867        220 --LLSLI-------------------------------------LDTRLTCVAFDGTED-------------NIYMGTSE  247 (343)
Q Consensus       220 --~~~~~-------------------------------------~~~~i~~~~~~~~~~-------------~l~~~~~d  247 (343)
                        ...+.                                     .......+...+++.             +++.++.+
T Consensus       218 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (360)
T d1k32a3         218 SKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEK  297 (360)
T ss_dssp             BEEEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCC
T ss_pred             cceEEEecccCccccceECCCcCcccccceeecccccceeecccCcCceeEeeecCCCceEEEEEecCCCeeEEEecCCC
Confidence              11110                                     011223333333322             23345567


Q ss_pred             CcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc-cCCce
Q psy10867        248 GVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-HKGPV  323 (343)
Q Consensus       248 ~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v  323 (343)
                      +.|++||+.+.+               ...|.+.|.+++|+|||++|++++.||.|++||+++++...++. +..++
T Consensus       298 ~~i~~~d~~~~~---------------~~~~~~~v~~~~~SpDG~~l~~~~~Dg~i~v~d~~~~~~~~~~~~d~~~~  359 (360)
T d1k32a3         298 GVLLKYDVKTRK---------------VTEVKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEKPEDERTVETDKRPL  359 (360)
T ss_dssp             EEEEEEETTTCC---------------EEEEEEEEEEEEECTTSCEEEEEETTSCEEEEESSCTTSCEECCCCSSCE
T ss_pred             CEEEEEECCCCe---------------EEEecCCcCEEEECCCCCEEEEEECCCeEEEEECCCCCcceEEEeccccc
Confidence            789999976532               23456679999999999999999999999999999998888776 44443

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5e-32  Score=215.56  Aligned_cols=268  Identities=21%  Similarity=0.322  Sum_probs=213.3

Q ss_pred             EEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-ecCCeEEEEE
Q psy10867         27 LLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQ  105 (343)
Q Consensus        27 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~  105 (343)
                      .+..+..|.. .|+|++  +++.+|++|+.||+|+|||+++++++..+.+|.+.|.+++|  ++++|++ +.|+.|++|+
T Consensus         7 ~i~~~~~~~~-~V~c~~--~d~~~l~sgs~Dg~i~vWd~~~~~~~~~l~~H~~~V~~v~~--~~~~l~s~s~D~~i~~~~   81 (293)
T d1p22a2           7 RIHCRSETSK-GVYCLQ--YDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWD   81 (293)
T ss_dssp             CEECCCSSCC-CEEEEE--CCSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEE
T ss_pred             EEeccCCCCC-CEEEEE--EcCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEeeeec--ccceeecccccccccccc
Confidence            3445556666 888765  57889999999999999999999999999999999999987  5678886 7899999999


Q ss_pred             ccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccc
Q psy10867        106 ISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLP  185 (343)
Q Consensus       106 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (343)
                      +..+........+....  ..+.+....++++..++.+.+|+........                   ....+..|...
T Consensus        82 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~  140 (293)
T d1p22a2          82 VNTGEMLNTLIHHCEAV--LHLRFNNGMMVTCSKDRSIAVWDMASPTDIT-------------------LRRVLVGHRAA  140 (293)
T ss_dssp             SSSCCEEEEECCCCSCE--EEEECCTTEEEEEETTSCEEEEECSSSSCCE-------------------EEEEECCCSSC
T ss_pred             ccccccccccccccccc--ccccccccceeecccccceeEeecccccccc-------------------ccccccccccc
Confidence            99998877776554433  3455567789999999999999998764332                   34555678888


Q ss_pred             eEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccc
Q psy10867        186 VTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDH  264 (343)
Q Consensus       186 v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~  264 (343)
                      +..+.+.+    ..+++++.|+.+++||+++++.+..+. +...+..+.++  +.++++++.|+.|++||+++...    
T Consensus       141 v~~~~~~~----~~~~~~s~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~----  210 (293)
T d1p22a2         141 VNVVDFDD----KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGAC----  210 (293)
T ss_dssp             EEEEEEET----TEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCE----
T ss_pred             cccceecc----cccccccCCCceeeecCCCCcEEEEEcccccccccccCC--CCeEEEecCCCEEEEEeccccee----
Confidence            88887766    468889999999999999999988877 45667777665  57899999999999999987544    


Q ss_pred             cccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccc---------eeeeecc-cCCceEEEEEccCCCe
Q psy10867        265 HIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISR---------QCLRTIQ-HKGPVLGAFLGLLPPA  334 (343)
Q Consensus       265 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~---------~~~~~~~-~~~~v~~~~~sp~~~~  334 (343)
                             +....+|...+..  +++++.+|++++.||.|++||+.++         .++..+. |.+.|++++|+  +++
T Consensus       211 -------~~~~~~~~~~v~~--~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~H~~~V~~v~~d--~~~  279 (293)
T d1p22a2         211 -------LRVLEGHEELVRC--IRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFD--EFQ  279 (293)
T ss_dssp             -------EEEECCCSSCEEE--EECCSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEEC--SSC
T ss_pred             -------eeeecccceeeee--ccccceEEEEEcCCCEEEEEECCCCccccccCCceeeEEecCCCCCEEEEEEc--CCE
Confidence                   3345567777765  5577889999999999999998643         3456666 89999999984  678


Q ss_pred             eeecccC
Q psy10867        335 IHDYDFT  341 (343)
Q Consensus       335 l~~~~~~  341 (343)
                      |++++..
T Consensus       280 l~s~s~D  286 (293)
T d1p22a2         280 IVSSSHD  286 (293)
T ss_dssp             EEECCSS
T ss_pred             EEEEecC
Confidence            9998754

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=4e-32  Score=228.02  Aligned_cols=316  Identities=6%  Similarity=-0.022  Sum_probs=219.2

Q ss_pred             eEEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCccccee-----cccCCcc
Q psy10867          6 EVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQL-----RLICPGR   80 (343)
Q Consensus         6 ~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~-----~~~~~~~   80 (343)
                      -+.++..+||.|+|||+.+++.+.+++.+.  .+..++|+|||+++++++.|+.+++||+.+++....     ...|...
T Consensus        33 ~~~V~~~~dg~v~vwD~~t~~~~~~l~~g~--~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~~~~~~i~~~~~~~~~  110 (426)
T d1hzua2          33 LFSVTLRDAGQIALVDGDSKKIVKVIDTGY--AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSV  110 (426)
T ss_dssp             EEEEEETTTTEEEEEETTTCSEEEEEECCS--SEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEEE
T ss_pred             EEEEEEcCCCEEEEEECCCCcEEEEEeCCC--CeeEEEECCCCCEEEEEeCCCCEEEEEccCCceeEEEEEeCCCCCcce
Confidence            356888899999999999999999999875  789999999999999988889999999998875422     2245566


Q ss_pred             eEEEEECCCCCEEEE--ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCC-EEEEecCCCeEEEeecCccceeeee
Q psy10867         81 ISSMQASPDAAYIAV--SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSN-FIVTGGEDGTICVWQLSRLICKQTV  157 (343)
Q Consensus        81 v~~~~~s~~~~~l~~--~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~  157 (343)
                      +.+++|+|||+++++  ..++.+.+||..++.++..+..|...+....+.+++. ..+..+.|+...++...........
T Consensus       111 ~~s~~~spDG~~l~v~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~d~~~~~~~~~~~~~i~~~  190 (426)
T d1hzua2         111 ESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLV  190 (426)
T ss_dssp             EECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEE
T ss_pred             EEeeeecCCCCEEEEeecCCCeEEEEcCCccceeEEeeccCCCccceeecCCCceeEEEECCCCCEEEEecCCCCeEEEE
Confidence            778888999998765  4789999999999998888776655554444544443 2233334444333333222111111


Q ss_pred             ecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecC---CcEEEEEE
Q psy10867        158 AFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILD---TRLTCVAF  234 (343)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~---~~i~~~~~  234 (343)
                      ...          ...........+...+..+.++|+++ .++++...+..+.+++..+++.+......   .......+
T Consensus       191 ~~~----------~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (426)
T d1hzua2         191 NYK----------DIDNLTVTSIGAAPFLADGGWDSSHR-YFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF  259 (426)
T ss_dssp             ECS----------SSSSCEEEEEECCSSEEEEEECTTSC-EEEEEETTCSEEEEEETTTTEEEEEEECSSCCCCSCCEEE
T ss_pred             Eec----------cccceeeEEeccCCccEeeeECCCCc-EEEeeeecccceeeeecccccEEEEeccCCcccccceeee
Confidence            000          00011223335777889999999994 34445556788999999999988777632   22233333


Q ss_pred             cCCCC-EE--EEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEE-------EeCCCcEE
Q psy10867        235 DGTED-NI--YMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLS-------SSADETLK  304 (343)
Q Consensus       235 ~~~~~-~l--~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s-------~~~dg~i~  304 (343)
                      .+.+. .+  +....++.+.+|+.......    ....+....+.+|...+..++|+||+++|++       ++.|++|+
T Consensus       260 ~~~~~~~~~~~~~~~d~~v~~~~~~~~~~~----~~~~~~~~~l~g~~~~v~~v~~sPdg~~l~v~~~~~~s~~~~~tv~  335 (426)
T d1hzua2         260 VHPKYGPVWSTSHLGDGSISLIGTDPKNHP----QYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVA  335 (426)
T ss_dssp             EETTTEEEEEEECTTTCEEEEEECCTTTCT----TTBTSEEEEEECSSSCCCCEECCTTCSEEEECCTTCSSHHHHTCEE
T ss_pred             ecCCCCceEEeccCCCceEEEeeccccccc----cccceEeEEEecCCCceeEEEcCCCCceEEEeecCCCCcccCCEEE
Confidence            33332 22  23456888888887654221    1123345678889999999999999999994       55688999


Q ss_pred             EEecccceeeeec----------ccCCceEEEEEccCCCeeeec
Q psy10867        305 IWHTISRQCLRTI----------QHKGPVLGAFLGLLPPAIHDY  338 (343)
Q Consensus       305 iwd~~~~~~~~~~----------~~~~~v~~~~~sp~~~~l~~~  338 (343)
                      +||+.+++...++          ++...+.+++|||||++|+.+
T Consensus       336 vwd~~t~~~~~~~~~~~~~~~~~~~~~rv~~~~fSpDGk~i~vs  379 (426)
T d1hzua2         336 VFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFS  379 (426)
T ss_dssp             EEETTCTTSCCEEECHHHHHCCCSSCCCEEEEEECSSSSEEEEE
T ss_pred             EEECCCCCcCeEEeccchhcccCCCCccEEEEEECCCCCEEEEE
Confidence            9999998776554          145669999999999988654

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-31  Score=216.87  Aligned_cols=272  Identities=20%  Similarity=0.266  Sum_probs=211.6

Q ss_pred             EecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-ecC
Q psy10867         20 WEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SIE   98 (343)
Q Consensus        20 wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d   98 (343)
                      |+..+.++.+.+++|.+ .|.+ +++++|++|++|+.||+|+|||+.++++++.+.+|.+.|.+++|+|+  +|++ +.|
T Consensus         1 W~~~~~~~~~~l~GH~~-~V~s-~~~~~g~~l~sgs~Dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~~~~--~l~s~s~D   76 (342)
T d2ovrb2           1 WRRGELKSPKVLKGHDD-HVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN--IIISGSTD   76 (342)
T ss_dssp             HHHSCCCCCEEEECSTT-SCEE-EEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEETT--EEEEEETT
T ss_pred             CCCCCCCcCEEECCcCC-ceEE-EEEECCCEEEEEeCCCeEEEEECCCCCEEEEEeCCCCCEEEEEeCCC--ccccceec
Confidence            66677788889999998 8765 46667888999999999999999999999989999999999999875  6665 789


Q ss_pred             CeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeee
Q psy10867         99 TKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHV  178 (343)
Q Consensus        99 ~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (343)
                      +.+++|+............+...+.....  ....+..+..|+.+.+|+..++.....+                     
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~i~~~~~~~~~~~~~~---------------------  133 (342)
T d2ovrb2          77 RTLKVWNAETGECIHTLYGHTSTVRCMHL--HEKRVVSGSRDATLRVWDIETGQCLHVL---------------------  133 (342)
T ss_dssp             SCEEEEETTTTEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEESSSCCEEEEE---------------------
T ss_pred             ccccccccccccceecccccceeEeeeec--ccccccccccceeEEEeecccccceeee---------------------
Confidence            99999999888777777666666666554  4567888899999999999887543322                     


Q ss_pred             ecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeec
Q psy10867        179 KSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQ  257 (343)
Q Consensus       179 ~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~  257 (343)
                       ..+...  .....+..  ..++.++.|+.+++||.+..+.+..+. +...+.  .+.+++.++++++.||.|++||++.
T Consensus       134 -~~~~~~--~~~~~~~~--~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~--~~~~~~~~l~s~~~dg~i~~~d~~~  206 (342)
T d2ovrb2         134 -MGHVAA--VRCVQYDG--RRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVY--SLQFDGIHVVSGSLDTSIRVWDVET  206 (342)
T ss_dssp             -ECCSSC--EEEEEECS--SCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEE--EEEECSSEEEEEETTSCEEEEETTT
T ss_pred             -eccccc--ceeecccc--ceeeeecCCCeEEEeecccceeeEEEcCcccccc--cccCCCCEEEEEeCCCeEEEeeccc
Confidence             222222  22333444  578999999999999999888877766 444444  4455788999999999999999887


Q ss_pred             ccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc----cCCceEEEEEccCCC
Q psy10867        258 VPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ----HKGPVLGAFLGLLPP  333 (343)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~----~~~~v~~~~~sp~~~  333 (343)
                      ...           +..+.+|...+.++++++  ++|++++.|+.|++||+...+....+.    |...+.++.++  ++
T Consensus       207 ~~~-----------~~~~~~~~~~v~~~~~~~--~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~  271 (342)
T d2ovrb2         207 GNC-----------IHTLTGHQSLTSGMELKD--NILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KN  271 (342)
T ss_dssp             CCE-----------EEEECCCCSCEEEEEEET--TEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SS
T ss_pred             cee-----------eeEecccccceeEEecCC--CEEEEEcCCCEEEEEecccccccccccccceeeeceeecccC--CC
Confidence            543           455678888898887764  599999999999999999888777765    45566666655  56


Q ss_pred             eeeeccc
Q psy10867        334 AIHDYDF  340 (343)
Q Consensus       334 ~l~~~~~  340 (343)
                      ++++++.
T Consensus       272 ~~~s~s~  278 (342)
T d2ovrb2         272 FVITSSD  278 (342)
T ss_dssp             EEEEEET
T ss_pred             eeEEEcC
Confidence            8887764

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=100.00  E-value=1.4e-31  Score=219.71  Aligned_cols=271  Identities=11%  Similarity=0.031  Sum_probs=204.6

Q ss_pred             ceEEEEeC-CceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-ecCC--eEEEEEccCCceEEE
Q psy10867         39 PHSMCLLG-NDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SIET--KLHMWQISSGRLLAT  114 (343)
Q Consensus        39 v~~~~~~~-~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~--~i~v~~~~~~~~~~~  114 (343)
                      ...-.||| ||+++|.++. |.|.+||++++...+.  .|...|.+++|+|||++|+. +.+.  .|++||+++++.. .
T Consensus         5 ~~~~~fSP~dG~~~a~~~~-g~v~v~d~~~~~~~~~--~~~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~~~~-~   80 (360)
T d1k32a3           5 KFAEDFSPLDGDLIAFVSR-GQAFIQDVSGTYVLKV--PEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAE-K   80 (360)
T ss_dssp             GGEEEEEECGGGCEEEEET-TEEEEECTTSSBEEEC--SCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCCEE-E
T ss_pred             hhcccccCCCCCEEEEEEC-CeEEEEECCCCcEEEc--cCCCCEEEEEECCCCCEEEEEEcCCCCEEEEEECCCCcEE-E
Confidence            34578999 9999999988 8999999998876654  68899999999999999885 4443  7999999887654 6


Q ss_pred             ecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecC
Q psy10867        115 ASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKL  194 (343)
Q Consensus       115 ~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  194 (343)
                      +..|...|.+++|+|++++|++++.++.+++|++.+..                      ....+..|...+.+++|+|+
T Consensus        81 ~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~spd  138 (360)
T d1k32a3          81 FEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGK----------------------PTVIERSREAMITDFTISDN  138 (360)
T ss_dssp             CCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCC----------------------EEEEEECSSSCCCCEEECTT
T ss_pred             eeCCCceEEeeeecccccccceeccccccccccccccc----------------------eeeeeecccccccchhhccc
Confidence            67899999999999999999999999999999998864                      34455678888999999999


Q ss_pred             CCceEEEEe----------eCCCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeeccccccc-
Q psy10867        195 GAKSRVASV----------SHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRD-  263 (343)
Q Consensus       195 ~~~~~l~~~----------~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-  263 (343)
                      +  ++|+.+          ..++.+++||+.+++......+...+..++|+|+|++|++++.++.+.+||......... 
T Consensus       139 g--~~la~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~s~~~~~~~~d~~~~~~~~~~  216 (360)
T d1k32a3         139 S--RFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEV  216 (360)
T ss_dssp             S--CEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECCS
T ss_pred             e--eeeeeeccccccceeeccccceeeeccccCceeeecccccccccccccCCCCEEEEEeCCCceEcccccccceeecc
Confidence            9  677743          445679999999988777777888899999999999999999999999998654321100 


Q ss_pred             ------cccc-----------CC------C--------CCCccccccCcEEEEEEcc----------CC---CEEEEEeC
Q psy10867        264 ------HHIQ-----------DS------T--------SNPDFIGHEKQVTSLSCSI----------TG---ITLLSSSA  299 (343)
Q Consensus       264 ------~~~~-----------~~------~--------~~~~~~~~~~~v~~~~~s~----------~~---~~l~s~~~  299 (343)
                            ....           ..      .        .+..+....+....+...+          .+   .++++++.
T Consensus       217 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (360)
T d1k32a3         217 VSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPE  296 (360)
T ss_dssp             CBEEEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCC
T ss_pred             ccceEEEecccCccccceECCCcCcccccceeecccccceeecccCcCceeEeeecCCCceEEEEEecCCCeeEEEecCC
Confidence                  0000           00      0        0000111112223333332          22   24566778


Q ss_pred             CCcEEEEecccceeeeecccCCceEEEEEccCCCeeeeccc
Q psy10867        300 DETLKIWHTISRQCLRTIQHKGPVLGAFLGLLPPAIHDYDF  340 (343)
Q Consensus       300 dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~  340 (343)
                      ++.|++||+.+++...   +.+.|.+++|||||++|++++-
T Consensus       297 ~~~i~~~d~~~~~~~~---~~~~v~~~~~SpDG~~l~~~~~  334 (360)
T d1k32a3         297 KGVLLKYDVKTRKVTE---VKNNLTDLRLSADRKTVMVRKD  334 (360)
T ss_dssp             CEEEEEEETTTCCEEE---EEEEEEEEEECTTSCEEEEEET
T ss_pred             CCEEEEEECCCCeEEE---ecCCcCEEEECCCCCEEEEEEC
Confidence            8999999998876432   4467999999999999998764

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

Probab=100.00  E-value=2.6e-31  Score=222.54  Aligned_cols=306  Identities=8%  Similarity=-0.054  Sum_probs=212.5

Q ss_pred             eEEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCccccee-----cccCCcc
Q psy10867          6 EVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQL-----RLICPGR   80 (343)
Q Consensus         6 ~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~-----~~~~~~~   80 (343)
                      -++++.+.+|.|.|||..+++.+..+..+.  .+..++|+|||+++++++.|+.+++||+.+++....     ...|.+.
T Consensus        33 ~~~v~~~d~g~v~v~D~~t~~v~~~~~~g~--~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~~~~~i~~~~~~~~~  110 (432)
T d1qksa2          33 LFSVTLRDAGQIALIDGSTYEIKTVLDTGY--AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSI  110 (432)
T ss_dssp             EEEEEETTTTEEEEEETTTCCEEEEEECSS--CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEE
T ss_pred             EEEEEEcCCCEEEEEECCCCcEEEEEeCCC--CeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCceEEEEEecCCCCCCe
Confidence            456899999999999999999999999875  789999999999999988889999999988764322     2245566


Q ss_pred             eEEEEECCCCCEEE-E-ecCCeEEEEEccCCceEEEeccc-----------CCCeEEEEEecCCCEE-EEecCCCeEEEe
Q psy10867         81 ISSMQASPDAAYIA-V-SIETKLHMWQISSGRLLATASSH-----------YQPITIVKWSADSNFI-VTGGEDGTICVW  146 (343)
Q Consensus        81 v~~~~~s~~~~~l~-~-~~d~~i~v~~~~~~~~~~~~~~~-----------~~~v~~~~~~~~~~~l-~s~~~dg~i~iw  146 (343)
                      +.+.+|+|||++|+ + ..++.|++||..+++.+..+..|           ......+.++|++..+ ++...++.|.+|
T Consensus       111 ~~s~~~SpDG~~l~vs~~~~~~v~i~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~~~vs~~~~~~i~~~  190 (432)
T d1qksa2         111 ETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLV  190 (432)
T ss_dssp             EECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEE
T ss_pred             EEecccCCCCCEEEEEcCCCCeEEEEeCccccceeeeccCCccccceeccCCCceeEEEECCCCCEEEEEEccCCeEEEE
Confidence            67778899999875 4 56899999999999988776543           3456678899988865 566778999999


Q ss_pred             ecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEe-eCCCeEEEEecCCCceEEEeec
Q psy10867        147 QLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASV-SHDRTCKIFDLCTGEDLLSLIL  225 (343)
Q Consensus       147 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~-~~d~~i~~wd~~~~~~~~~~~~  225 (343)
                      |..+.+.....                     .-.+...+..++|+|++  ++++++ ..++.+.++|.++++....+..
T Consensus       191 d~~~~~~~~~~---------------------~i~~g~~~~~~~~spdg--~~~~va~~~~~~v~v~d~~~~~~~~~~~~  247 (432)
T d1qksa2         191 DYTDLNNLKTT---------------------EISAERFLHDGGLDGSH--RYFITAANARNKLVVIDTKEGKLVAIEDT  247 (432)
T ss_dssp             ETTCSSEEEEE---------------------EEECCSSEEEEEECTTS--CEEEEEEGGGTEEEEEETTTTEEEEEEEC
T ss_pred             EccCCCcceEE---------------------EEcccCccccceECCCC--CEEEEeccccceEEEeecccceEEEEecc
Confidence            98875432211                     11345678899999999  555554 4567899999988877766542


Q ss_pred             ------CCcEEEEEEcCCCCEEEEEc-CCCcEEEEEeeccccccc-------ccccCCCCC--------------Ccccc
Q psy10867        226 ------DTRLTCVAFDGTEDNIYMGT-SEGVIKSFCLRQVPRTRD-------HHIQDSTSN--------------PDFIG  277 (343)
Q Consensus       226 ------~~~i~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~-------~~~~~~~~~--------------~~~~~  277 (343)
                            ........+...+....+.. .++.|.+|+.........       .....+..+              ..+..
T Consensus       248 g~~~~~~~~~~~~~~~~~g~~~~~~~lg~~~v~~~~~~~~~~~~~~~~v~~~~~~~~g~~~~~~s~p~~~~lw~~~~~~~  327 (432)
T d1qksa2         248 GGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNP  327 (432)
T ss_dssp             SSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCS
T ss_pred             CccccccCcccceecCCCCceecccccCCceEEecccccccccccccEEEEEEEcCCCCeEEEEecCCccceeecccCCC
Confidence                  22233344443344443332 366677776544221100       000000000              01112


Q ss_pred             ccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecccCCceEEEEEccCCCeeeecc
Q psy10867        278 HEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQHKGPVLGAFLGLLPPAIHDYD  339 (343)
Q Consensus       278 ~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~  339 (343)
                      |.....++++ ||++.+++++.|+.+++|++.++..+.  ++...+.+++|||||++|+.+.
T Consensus       328 ~~~~~~sv~v-pDg~~la~~s~d~~~k~w~~~~~~~l~--~~~~~v~~~~fS~DG~~v~~S~  386 (432)
T d1qksa2         328 EAEISGSVAV-FDIKAMTGDGSDPEFKTLPIAEWAGIT--EGQPRVVQGEFNKDGTEVWFSV  386 (432)
T ss_dssp             SHHHHTCEEE-EEGGGCCCSSSCCCEEEECHHHHHTCC--SSCCEEEEEEECTTSSEEEEEE
T ss_pred             CCCeeeEEEE-EechhhcccccCCceEecccccccccC--CCCCcEEEeEECCCCCEEEEEE
Confidence            2222334554 889999999999999999986664332  4777899999999999987664

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=100.00  E-value=3.6e-29  Score=200.07  Aligned_cols=269  Identities=12%  Similarity=0.100  Sum_probs=214.3

Q ss_pred             EecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEE-EEEcCCCeEEEEeCCCcccceecccCCcceEEEEEC
Q psy10867          9 FSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVL-GVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQAS   87 (343)
Q Consensus         9 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s   87 (343)
                      ++..+++.|.+||+++++.+++++...  .+..++|+|||+++ +++..++.|++||+.+++.+..+..+. .+..++|+
T Consensus         6 V~~~~~~~v~v~D~~t~~~~~~i~~g~--~p~~va~spdG~~l~v~~~~~~~i~v~d~~t~~~~~~~~~~~-~~~~~~~~   82 (301)
T d1l0qa2           6 IANSESDNISVIDVTSNKVTATIPVGS--NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVS   82 (301)
T ss_dssp             EEETTTTEEEEEETTTTEEEEEEECSS--SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEEC
T ss_pred             EEECCCCEEEEEECCCCeEEEEEECCC--CceEEEEeCCCCEEEEEECCCCEEEEEECCCCceeeeeeccc-cccccccc
Confidence            356678999999999999999998765  67899999999755 567777999999999998887665554 56899999


Q ss_pred             CCCCEEEE--ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEE-EecCCCeEEEeecCccceeeeeecCCCCC
Q psy10867         88 PDAAYIAV--SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIV-TGGEDGTICVWQLSRLICKQTVAFGIPGS  164 (343)
Q Consensus        88 ~~~~~l~~--~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-s~~~dg~i~iwd~~~~~~~~~~~~~~~~~  164 (343)
                      +++..+++  ..++.+.+|+..+++....+..+ ....++.|+|+++.++ ++..++.+.+|+..+......+       
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~-------  154 (301)
T d1l0qa2          83 PDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG-KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTV-------  154 (301)
T ss_dssp             TTSSEEEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE-------
T ss_pred             cccccccccccccceeeecccccceeeeecccc-ccceEEEeecCCCeeeeeeccccceeeeeccccceeeec-------
Confidence            99987765  35679999999999888887655 4578899999998765 5567889999999987544332       


Q ss_pred             CCCccccccceeeeecccccceEEEEeecCCCceEEEEee-CCCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEE
Q psy10867        165 SGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVS-HDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYM  243 (343)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~-~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~  243 (343)
                                      .+...+..+.++|++  ..++++. .++.+.+|+....+..........+..++++++++.+++
T Consensus       155 ----------------~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~v  216 (301)
T d1l0qa2         155 ----------------SVGRSPKGIAVTPDG--TKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYV  216 (301)
T ss_dssp             ----------------ECCSSEEEEEECTTS--SEEEEEETTTTEEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEE
T ss_pred             ----------------ccCCCceEEEeeccc--cceeeecccccccccccccceeeeecccccCCcceeecccccccccc
Confidence                            244567889999998  4555554 557788898888888888778888999999999998877


Q ss_pred             EcC---CCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEE-EEEeCCCcEEEEecccceeeeecc
Q psy10867        244 GTS---EGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITL-LSSSADETLKIWHTISRQCLRTIQ  318 (343)
Q Consensus       244 ~~~---d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~s~~~dg~i~iwd~~~~~~~~~~~  318 (343)
                      +..   ++.|++||+.+.+...           .+. +...+.+++|+|||++| ++++.|+.|++||+++++.+.++.
T Consensus       217 ~~~~~~~~~v~v~D~~t~~~~~-----------~~~-~~~~~~~va~spdg~~l~va~~~~~~i~v~D~~t~~~~~~~~  283 (301)
T d1l0qa2         217 TNVDKYFNTVSMIDTGTNKITA-----------RIP-VGPDPAGIAVTPDGKKVYVALSFCNTVSVIDTATNTITATMA  283 (301)
T ss_dssp             EEECSSCCEEEEEETTTTEEEE-----------EEE-CCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred             ccccceeeeeeeeecCCCeEEE-----------EEc-CCCCEEEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEEEe
Confidence            643   4689999998754422           222 33568999999999976 577789999999999999998886

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.97  E-value=1.1e-30  Score=212.02  Aligned_cols=273  Identities=12%  Similarity=0.079  Sum_probs=193.5

Q ss_pred             ccceEEEecCC--------CCeEEEEecCCceE---EEEEecCCCCcceEEEEeCC-ceEEEEEcCCCeEEEEeCCCccc
Q psy10867          3 LLNEVAFSYDG--------SGAISVWEPKGGTL---LMSYKGASVLSPHSMCLLGN-DYVLGVEKGKPMIQAWPVNSQEK   70 (343)
Q Consensus         3 ~v~~~~~s~~~--------dg~i~iwd~~~~~~---~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~i~iw~~~~~~~   70 (343)
                      .|+++.|+|++        ||+|+|||+.++..   +....+|.. +|.+++|+|+ +.++++|+.|+.|++|+......
T Consensus        13 ~I~~l~fsp~~~~L~s~s~Dg~v~iwd~~~~~~~~~~~~~~~h~~-~V~~v~f~~~~~~~l~sg~~d~~v~~w~~~~~~~   91 (342)
T d1yfqa_          13 YISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKH-PLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPS   91 (342)
T ss_dssp             CEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSS-CEEEEEEEESSSEEEEEEETTSCEEEECSSSSSS
T ss_pred             CEEEEEEeCCCCEEEEEECCCeEEEEEccCCCcceEEEEecCCCC-CEEEEEEeCCCCCEEEEcccccceeeeecccccc
Confidence            35556665554        89999999876533   333446888 9999999986 57888888889999999988776


Q ss_pred             ceecccCC-cceEEEEECCCCCEEEE-ecCCeEEEEEccCCce----EEEeccc--CCCeEEEEEecCCCEEEEecCCCe
Q psy10867         71 AQLRLICP-GRISSMQASPDAAYIAV-SIETKLHMWQISSGRL----LATASSH--YQPITIVKWSADSNFIVTGGEDGT  142 (343)
Q Consensus        71 ~~~~~~~~-~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~----~~~~~~~--~~~v~~~~~~~~~~~l~s~~~dg~  142 (343)
                      ......+. .......+.++...+++ +.++.+++||++++..    ......+  ........+.+++..+++++.|+.
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  171 (342)
T d1yfqa_          92 FQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQ  171 (342)
T ss_dssp             EEECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSEEEEEESTTE
T ss_pred             cccccccccccccccccccccccccccccccccceeeccccccceeeecccccccccceeeeeeeeccCCceeeecCCCc
Confidence            65544433 33444455566666665 7899999999875432    2222222  234456677888999999999999


Q ss_pred             EEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceE--
Q psy10867        143 ICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDL--  220 (343)
Q Consensus       143 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~--  220 (343)
                      |++||+.......                   .......+...+.+..+.+... ..+++++.||.+.+|+.......  
T Consensus       172 i~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~~v~~~~~~~~~~~  231 (342)
T d1yfqa_         172 VQWFRLPLCEDDN-------------------GTIEESGLKYQIRDVALLPKEQ-EGYACSSIDGRVAVEFFDDQGDDYN  231 (342)
T ss_dssp             EEEEESSCCTTCC-------------------CEEEECSCSSCEEEEEECSGGG-CEEEEEETTSEEEEEECCTTCCSTT
T ss_pred             EEEEecccCcccc-------------------eeeeecccccceeeeEeecCCC-CEEEeecCCCeEEEEEecCCcceee
Confidence            9999998764432                   2222233445566666655432 78999999999999987643211  


Q ss_pred             ----EEe----------ecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEE
Q psy10867        221 ----LSL----------ILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLS  286 (343)
Q Consensus       221 ----~~~----------~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  286 (343)
                          ..+          .+...+.+++|+|++++|++|+.||.|++||+++.....           .+..+ ..+..++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~lasg~~Dg~v~vWD~~~~~~l~-----------~~~~~-~~~~~~~  299 (342)
T d1yfqa_         232 SSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIK-----------NFAKF-NEDSVVK  299 (342)
T ss_dssp             CTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEE-----------ECCCC-SSSEEEE
T ss_pred             ccccceeeeeeeccCCCcccccceeEEecCCccEEEEECCCCEEEEEECCCCcEEE-----------EecCC-CCCEEEE
Confidence                111          134468999999999999999999999999998765432           23222 3455678


Q ss_pred             EccCCCEEEEEeCCCcEEEEec
Q psy10867        287 CSITGITLLSSSADETLKIWHT  308 (343)
Q Consensus       287 ~s~~~~~l~s~~~dg~i~iwd~  308 (343)
                      |+|++++|++++.|+.+++|..
T Consensus       300 ~s~~~~~l~~a~sdd~~~~~~~  321 (342)
T d1yfqa_         300 IACSDNILCLATSDDTFKTNAA  321 (342)
T ss_dssp             EEECSSEEEEEEECTHHHHCSS
T ss_pred             EEeCCCEEEEEEcCCcEEEeee
Confidence            8899999999999998888864

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.97  E-value=9.4e-28  Score=194.77  Aligned_cols=293  Identities=12%  Similarity=0.068  Sum_probs=212.2

Q ss_pred             eEEEecCCCCeEEEEecCCceEEEEEecCC-CCcceEEEEeCCceEE-EEEcCCCeEEEEeCCCcccceecccCC-----
Q psy10867          6 EVAFSYDGSGAISVWEPKGGTLLMSYKGAS-VLSPHSMCLLGNDYVL-GVEKGKPMIQAWPVNSQEKAQLRLICP-----   78 (343)
Q Consensus         6 ~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~-~~~~~~~~i~iw~~~~~~~~~~~~~~~-----   78 (343)
                      ..+++++.|+.|+|||+.+++.+.++..+. ...+.+++|+|||+++ +++..++.|.+||+.+++.+.....+.     
T Consensus         2 ~~~vt~~~d~~v~v~D~~s~~~~~~i~~~~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~   81 (337)
T d1pbyb_           2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV   81 (337)
T ss_dssp             EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred             eEEEEEcCCCEEEEEECCCCeEEEEEECCCCCCCccEEEECCCCCEEEEEECCCCeEEEEECCCCcEEEEEecCCCcccc
Confidence            467888999999999999999999987653 2268899999999765 567777999999999998876554332     


Q ss_pred             cceEEEEECCCCCEEEEe-------------cCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEE
Q psy10867         79 GRISSMQASPDAAYIAVS-------------IETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICV  145 (343)
Q Consensus        79 ~~v~~~~~s~~~~~l~~~-------------~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~i  145 (343)
                      ..+..++|+|++++++.+             .+..+.+||..+++....+..+ ..+..++|+|+++++++++.  .+.+
T Consensus        82 ~~~~~v~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~--~~~~  158 (337)
T d1pbyb_          82 KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAP-RQITMLAWARDGSKLYGLGR--DLHV  158 (337)
T ss_dssp             ECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECC-SSCCCEEECTTSSCEEEESS--SEEE
T ss_pred             cceeeEEEcCCCcEEEEeecCCcceeeeccccccceeeccccCCeEEEecccc-CCceEEEEcCCCCEEEEEcC--Ccce
Confidence            335578999999988753             2567999999999988887654 55788999999999999875  4778


Q ss_pred             eecCccceeeeeecCCCCCCCCccccccceeeeeccccc--ceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEe
Q psy10867        146 WQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSL--PVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSL  223 (343)
Q Consensus       146 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~  223 (343)
                      ||..+......+.............. .........+..  .........+.  .....+..++.+.+||..+++.....
T Consensus       159 ~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (337)
T d1pbyb_         159 MDPEAGTLVEDKPIQSWEAETYAQPD-VLAVWNQHESSGVMATPFYTARKDI--DPADPTAYRTGLLTMDLETGEMAMRE  235 (337)
T ss_dssp             EETTTTEEEEEECSTTTTTTTBCCCB-CCCCCCCCTTTTEEEEEEEEEBTTS--CTTSGGGEEEEEEEEETTTCCEEEEE
T ss_pred             eeeecCcEEEEeecCCccccceecCC-cceeeccccccceeeeeeeeeeecc--ceeeecccCccEEEEEcCCCcEEEEE
Confidence            99998877766553321111100000 000000011111  11111222222  33445666788999999988765543


Q ss_pred             --ecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCC
Q psy10867        224 --ILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADE  301 (343)
Q Consensus       224 --~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg  301 (343)
                        .+...+..+.++|++.+++.+  ++.|++||+.+......           + .+...+.+++|+|||++|++++.|+
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~--~~~i~v~d~~~~~~~~~-----------~-~~~~~~~~~~~s~dG~~l~v~~~~~  301 (337)
T d1pbyb_         236 VRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKR-----------V-PLPHSYYSVNVSTDGSTVWLGGALG  301 (337)
T ss_dssp             EEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEE-----------E-ECSSCCCEEEECTTSCEEEEESBSS
T ss_pred             ecCCCcceEEEEecccceEEEEc--cccEEEEECCCCcEEEE-----------E-cCCCCEEEEEECCCCCEEEEEeCCC
Confidence              256678889999999998876  58899999987654332           2 2456788999999999999999999


Q ss_pred             cEEEEecccceeeeecc
Q psy10867        302 TLKIWHTISRQCLRTIQ  318 (343)
Q Consensus       302 ~i~iwd~~~~~~~~~~~  318 (343)
                      .|++||.++++.+.+++
T Consensus       302 ~i~v~D~~t~~~v~~i~  318 (337)
T d1pbyb_         302 DLAAYDAETLEKKGQVD  318 (337)
T ss_dssp             EEEEEETTTCCEEEEEE
T ss_pred             cEEEEECCCCcEEEEEE
Confidence            99999999999998886

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=99.96  E-value=3.2e-26  Score=182.73  Aligned_cols=251  Identities=13%  Similarity=0.062  Sum_probs=197.2

Q ss_pred             EEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEE-E-ecCCeEEEEEccCCceEEEecccCCCeEEEEE
Q psy10867         50 VLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIA-V-SIETKLHMWQISSGRLLATASSHYQPITIVKW  127 (343)
Q Consensus        50 ~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~  127 (343)
                      ..+++..+++|.+||+++++.++.+. ....+..++|+|||++|+ + +.++.|++||+.+++.+..+..+.. +..+.|
T Consensus         4 ~yV~~~~~~~v~v~D~~t~~~~~~i~-~g~~p~~va~spdG~~l~v~~~~~~~i~v~d~~t~~~~~~~~~~~~-~~~~~~   81 (301)
T d1l0qa2           4 AYIANSESDNISVIDVTSNKVTATIP-VGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSS-PQGVAV   81 (301)
T ss_dssp             EEEEETTTTEEEEEETTTTEEEEEEE-CSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSS-EEEEEE
T ss_pred             EEEEECCCCEEEEEECCCCeEEEEEE-CCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCceeeeeecccc-cccccc
Confidence            44566677999999999998876654 345678999999999875 4 4678999999999999998887654 689999


Q ss_pred             ecCCCEEE-EecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCC
Q psy10867        128 SADSNFIV-TGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHD  206 (343)
Q Consensus       128 ~~~~~~l~-s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d  206 (343)
                      ++++..++ ++..++.+.+|+..+++....+                       .+...+.++.++|++. .+++++..+
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~dg~-~~~~~~~~~  137 (301)
T d1l0qa2          82 SPDGKQVYVTNMASSTLSVIDTTSNTVAGTV-----------------------KTGKSPLGLALSPDGK-KLYVTNNGD  137 (301)
T ss_dssp             CTTSSEEEEEETTTTEEEEEETTTTEEEEEE-----------------------ECSSSEEEEEECTTSS-EEEEEETTT
T ss_pred             ccccccccccccccceeeecccccceeeeec-----------------------cccccceEEEeecCCC-eeeeeeccc
Confidence            99988554 5567789999999887543332                       2445678899999984 455677778


Q ss_pred             CeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcCC-CcEEEEEeecccccccccccCCCCCCccccccCcEEEE
Q psy10867        207 RTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSE-GVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSL  285 (343)
Q Consensus       207 ~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  285 (343)
                      +.+.+|+..+++....+.....+..++++|+++.++++..+ +.+.+|+.......            ........+..+
T Consensus       138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~  205 (301)
T d1l0qa2         138 KTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVI------------DTVKVEAAPSGI  205 (301)
T ss_dssp             TEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEE------------EEEECSSEEEEE
T ss_pred             cceeeeeccccceeeecccCCCceEEEeeccccceeeecccccccccccccceeee------------ecccccCCccee
Confidence            99999999999999998888889999999999998887765 55666665543221            112234567889


Q ss_pred             EEccCCCEEEEEe---CCCcEEEEecccceeeeecccCCceEEEEEccCCCeeeec
Q psy10867        286 SCSITGITLLSSS---ADETLKIWHTISRQCLRTIQHKGPVLGAFLGLLPPAIHDY  338 (343)
Q Consensus       286 ~~s~~~~~l~s~~---~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~  338 (343)
                      +++++++.++.++   .++.|++||+.+++.+..+.....+.+++|+|||++|+++
T Consensus       206 ~~~~~g~~~~v~~~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~va~spdg~~l~va  261 (301)
T d1l0qa2         206 AVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPDPAGIAVTPDGKKVYVA  261 (301)
T ss_dssp             EECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEE
T ss_pred             eccccccccccccccceeeeeeeeecCCCeEEEEEcCCCCEEEEEEeCCCCEEEEE
Confidence            9999999877554   3468999999999999998877788999999999988644

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=99.95  E-value=1.6e-25  Score=182.20  Aligned_cols=298  Identities=10%  Similarity=0.056  Sum_probs=204.5

Q ss_pred             cccceEEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEE-EEEcCCCeEEEEeCCCcccceecccC---
Q psy10867          2 SLLNEVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVL-GVEKGKPMIQAWPVNSQEKAQLRLIC---   77 (343)
Q Consensus         2 ~~v~~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~i~iw~~~~~~~~~~~~~~---   77 (343)
                      ++-...+++++.++.|.+||+.+++.+.+++.+....+.+++|+|||+++ +++..++.|.+||+.+++.+......   
T Consensus         5 ~~~~~~l~~~~~~~~v~v~D~~t~~~~~t~~~~~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~~~~~~~~~~~~~   84 (346)
T d1jmxb_           5 KAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVP   84 (346)
T ss_dssp             CTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCST
T ss_pred             CCCCcEEEEEcCCCEEEEEECCCCCEEEEEEcCCCCCcceEEECCCCCEEEEEECCCCcEEEEeCccCeeeeeecccccc
Confidence            34467888999999999999999999999985433278999999998765 66667799999999998877544321   


Q ss_pred             ---CcceEEEEECCCCCEEEEe-------------cCCeEEEEEccCCceEEEeccc--CCCeEEEEEecCCCEEEEecC
Q psy10867         78 ---PGRISSMQASPDAAYIAVS-------------IETKLHMWQISSGRLLATASSH--YQPITIVKWSADSNFIVTGGE  139 (343)
Q Consensus        78 ---~~~v~~~~~s~~~~~l~~~-------------~d~~i~v~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~s~~~  139 (343)
                         ...+..++|+|||+++++.             .++.+.+|+..+++....+..+  ...+..+.+++++..++++  
T Consensus        85 ~~~~~~~~~v~~s~DG~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  162 (346)
T d1jmxb_          85 GEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAG--  162 (346)
T ss_dssp             TEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSCEEEES--
T ss_pred             cccCCceEEEEEecCCCEEEEEecCCcceeeeeccCcceEEEEecccceeeeEEEeeeccCceEEEEecCCCEEEEeC--
Confidence               1235678999999988753             2567999999887665444332  2345667777777766553  


Q ss_pred             CCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceE----EEEeecCCCceEEEEeeCCCeEEEEecC
Q psy10867        140 DGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVT----HVTLSKLGAKSRVASVSHDRTCKIFDLC  215 (343)
Q Consensus       140 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~----~~~~~~~~~~~~l~~~~~d~~i~~wd~~  215 (343)
                       +.+.+|++.++.....+.......... .................+.    ...+.+..  ..++++..+..+.+||+.
T Consensus       163 -~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~  238 (346)
T d1jmxb_         163 -PDIYKMDVKTGKYTVALPLRNWNRKGY-SAPDVLYFWPHQSPRHEFSMLYTIARFKDDK--QDPATADLLYGYLSVDLK  238 (346)
T ss_dssp             -SSEEEECTTTCCEEEEECSTTCCCTTB-CCCBCCCCCCCCCTTCEEEEEEEEEEC---------CCCEEEEEEEEEETT
T ss_pred             -CcceEEEccCCCEEEEEecCCCccceE-EeccccEEEEEecCCCceEeeeeeeeeccCc--eeEeeccCCceEEEEECC
Confidence             458999998887766654321111000 0000001111111111111    11122222  456677778889999999


Q ss_pred             CCceEEEee--cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCE
Q psy10867        216 TGEDLLSLI--LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGIT  293 (343)
Q Consensus       216 ~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~  293 (343)
                      ++.......  +...+..+.+++++.+++... ++.|.+||..+.+....           + .+...+.+++|+|||++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~v~d~~~~~~~~~-----------~-~~~~~~~~va~s~DG~~  305 (346)
T d1jmxb_         239 TGKTHTQEFADLTELYFTGLRSPKDPNQIYGV-LNRLAKYDLKQRKLIKA-----------A-NLDHTYYCVAFDKKGDK  305 (346)
T ss_dssp             TCCEEEEEEEECSSCEEEEEECSSCTTEEEEE-ESEEEEEETTTTEEEEE-----------E-ECSSCCCEEEECSSSSC
T ss_pred             CCceEEEEeecccceeEEEEEeCCCCEEEEec-CCeEEEEECCCCcEEEE-----------E-cCCCCEEEEEEcCCCCE
Confidence            888665543  567788999999988887765 46799999887554322           2 23456889999999999


Q ss_pred             EEEEeCCCcEEEEecccceeeeecc
Q psy10867        294 LLSSSADETLKIWHTISRQCLRTIQ  318 (343)
Q Consensus       294 l~s~~~dg~i~iwd~~~~~~~~~~~  318 (343)
                      |++++.|+.|++||+++++.+.+++
T Consensus       306 l~v~~~d~~v~v~D~~t~~~i~~i~  330 (346)
T d1jmxb_         306 LYLGGTFNDLAVFNPDTLEKVKNIK  330 (346)
T ss_dssp             EEEESBSSEEEEEETTTTEEEEEEE
T ss_pred             EEEEeCCCcEEEEECccCCEEEEEE
Confidence            9999999999999999999999988

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=99.94  E-value=8.2e-24  Score=171.14  Aligned_cols=296  Identities=10%  Similarity=0.112  Sum_probs=196.3

Q ss_pred             eEEEecCCCCeEEEEecCCceE---EEEEecCCCCcceEEEEeCCceEE-EEEcCCCeEEEEeCCCcccceec---ccCC
Q psy10867          6 EVAFSYDGSGAISVWEPKGGTL---LMSYKGASVLSPHSMCLLGNDYVL-GVEKGKPMIQAWPVNSQEKAQLR---LICP   78 (343)
Q Consensus         6 ~~~~s~~~dg~i~iwd~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~i~iw~~~~~~~~~~~---~~~~   78 (343)
                      -+.+++..++.|++|++.+...   ++.+ .+.. .+..++|+|||++| +++..++.|++|++.........   ..+.
T Consensus         5 ~v~v~~~~~~~I~v~~~~~~~~l~~~~~~-~~~~-~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~~~~~~~~~~   82 (333)
T d1ri6a_           5 TVYIASPESQQIHVWNLNHEGALTLTQVV-DVPG-QVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALP   82 (333)
T ss_dssp             EEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSS-CCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECS
T ss_pred             EEEEECCCCCcEEEEEEcCCCCeEEEEEE-cCCC-CEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCcEEEeeecccC
Confidence            3557777899999999875432   3333 4556 89999999999766 55666799999998866543222   2344


Q ss_pred             cceEEEEECCCCCEEEEe--cCCeEEEEEccCCceEEE--ecccCCCeEEEEEecCCCEEEEecC-CCeEEEeecCccce
Q psy10867         79 GRISSMQASPDAAYIAVS--IETKLHMWQISSGRLLAT--ASSHYQPITIVKWSADSNFIVTGGE-DGTICVWQLSRLIC  153 (343)
Q Consensus        79 ~~v~~~~~s~~~~~l~~~--~d~~i~v~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~s~~~-dg~i~iwd~~~~~~  153 (343)
                      ..+..++|+|||++|+++  .++.+.+|+.........  ...+...+.++.++|++++++.++. +..+.+|+......
T Consensus        83 ~~p~~l~~spDg~~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~d~~~~~~~~~~~~~i~~~~~~~~~~  162 (333)
T d1ri6a_          83 GSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGH  162 (333)
T ss_dssp             SCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSC
T ss_pred             CCceEEEEcCCCCEEeecccCCCceeeeccccccceecccccCCCccceEEEeeecceeeeccccccceeeEEEeccCCc
Confidence            557789999999988874  467899999887654433  3356667889999999998887764 56799999876543


Q ss_pred             eeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCce----EEEee-----
Q psy10867        154 KQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGED----LLSLI-----  224 (343)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~----~~~~~-----  224 (343)
                      .....                ..............++|++++. ..+.+....+...+|+......    .....     
T Consensus       163 ~~~~~----------------~~~~~~~~g~~p~~i~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~  225 (333)
T d1ri6a_         163 LVAQD----------------PAEVTTVEGAGPRHMVFHPNEQ-YAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPEN  225 (333)
T ss_dssp             EEEEE----------------EEEEECSTTCCEEEEEECTTSS-EEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTT
T ss_pred             ceeee----------------ceeeeeecCCCccEEEEeccce-eEEeeccccCceEEEeecccccceeeeeeeeeeecC
Confidence            32211                1122233445678899999984 3344555667788887654321    11111     


Q ss_pred             --cCCcEEEEEEcCCCCEEEEE-cCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEe-CC
Q psy10867        225 --LDTRLTCVAFDGTEDNIYMG-TSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSS-AD  300 (343)
Q Consensus       225 --~~~~i~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~-~d  300 (343)
                        .......++++++++++++. ..++.+.+|++.........        .........+.+++|+|||++|++++ .+
T Consensus       226 ~~~~~~~~~~~~s~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~p~~~a~spDGk~l~va~~~~  297 (333)
T d1ri6a_         226 FSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSK--------EGFQPTETQPRGFNVDHSGKYLIAAGQKS  297 (333)
T ss_dssp             CCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEE--------EEEEECSSSCCCEEECTTSSEEEEECTTT
T ss_pred             CCccccceeEEEecccCceeeecccCCeEEEEEEcCCCCEEEE--------EEEeCCCCCeeEEEEeCCCCEEEEEECCC
Confidence              13456788999999977665 56789999998764432211        11222345677899999999887665 56


Q ss_pred             CcEEEEe--ccccee--eeecccCCceEEEEE
Q psy10867        301 ETLKIWH--TISRQC--LRTIQHKGPVLGAFL  328 (343)
Q Consensus       301 g~i~iwd--~~~~~~--~~~~~~~~~v~~~~~  328 (343)
                      +.|++|+  .++|++  +..+.......++.+
T Consensus       298 ~~v~v~~id~~tG~l~~~~~~~~g~~p~~v~~  329 (333)
T d1ri6a_         298 HHISVYEIVGEQGLLHEKGRYAVGQGPMWVVV  329 (333)
T ss_dssp             CEEEEEEEETTTTEEEEEEEEECSSSCCEEEE
T ss_pred             CeEEEEEEECCCCcEEEEEeccCCCCCcEEEE
Confidence            8899995  456654  344443333334433

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.94  E-value=1.3e-24  Score=182.02  Aligned_cols=305  Identities=11%  Similarity=0.029  Sum_probs=199.2

Q ss_pred             cceEEEecCC--------CCeEEEEecCCceEEEE--Ee---cCCCCcceEEEEeCCceEE-EEEcCCCeEEEEeCCCcc
Q psy10867          4 LNEVAFSYDG--------SGAISVWEPKGGTLLMS--YK---GASVLSPHSMCLLGNDYVL-GVEKGKPMIQAWPVNSQE   69 (343)
Q Consensus         4 v~~~~~s~~~--------dg~i~iwd~~~~~~~~~--~~---~~~~~~v~~~~~~~~~~~~-~~~~~~~~i~iw~~~~~~   69 (343)
                      +..++|||||        ||.|++||+.+++....  ++   +|.. .+.+++|+|||+++ +++..++.+++||..+++
T Consensus        64 ~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~~~~~~i~~~~~~~~-~~~s~~~spDG~~l~v~~~~~~~v~i~d~~~~~  142 (426)
T d1hzua2          64 VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARS-VESSKFKGYEDRYTIAGAYWPPQFAIMDGETLE  142 (426)
T ss_dssp             EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEE-EEECCSTTCTTTEEEEEEEESSEEEEEETTTCC
T ss_pred             eeEEEECCCCCEEEEEeCCCCEEEEEccCCceeEEEEEeCCCCCcc-eEEeeeecCCCCEEEEeecCCCeEEEEcCCccc
Confidence            3456666666        79999999998875443  32   3444 56677788999765 555567999999999988


Q ss_pred             cceecccC-----------CcceEEEEECCCCCEEEE--ecCCeEEEEEccCCce-EEEecccCCCeEEEEEecCCCEEE
Q psy10867         70 KAQLRLIC-----------PGRISSMQASPDAAYIAV--SIETKLHMWQISSGRL-LATASSHYQPITIVKWSADSNFIV  135 (343)
Q Consensus        70 ~~~~~~~~-----------~~~v~~~~~s~~~~~l~~--~~d~~i~v~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~  135 (343)
                      .......+           ......+.+++++..++.  ...+.+.+++..+... ......+...+..+.|+|++++++
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~d~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  222 (426)
T d1hzua2         143 PKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLADGGWDSSHRYFM  222 (426)
T ss_dssp             EEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECSSSSSCEEEEEECCSSEEEEEECTTSCEEE
T ss_pred             eeEEeeccCCCccceeecCCCceeEEEECCCCCEEEEecCCCCeEEEEEeccccceeeEEeccCCccEeeeECCCCcEEE
Confidence            76554433           334556677777776665  2345677777665543 223345677889999999999877


Q ss_pred             Eec-CCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCc-eEEEEeeCCCeEEEEe
Q psy10867        136 TGG-EDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAK-SRVASVSHDRTCKIFD  213 (343)
Q Consensus       136 s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~l~~~~~d~~i~~wd  213 (343)
                      ++. .+..+.+++..++.........                    .+........+.+.+.+ ...+..+.|+.+.+|+
T Consensus       223 ~a~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~~~~  282 (426)
T d1hzua2         223 TAANNSNKVAVIDSKDRRLSALVDVG--------------------KTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIG  282 (426)
T ss_dssp             EEETTCSEEEEEETTTTEEEEEEECS--------------------SCCCCSCCEEEEETTTEEEEEEECTTTCEEEEEE
T ss_pred             eeeecccceeeeecccccEEEEeccC--------------------CcccccceeeeecCCCCceEEeccCCCceEEEee
Confidence            765 5677999999988766544321                    11111122222222210 1222334456666665


Q ss_pred             cCC-------CceEEEee-cCCcEEEEEEcCCCCEEEE-------EcCCCcEEEEEeecccccccccccCCCCCCccccc
Q psy10867        214 LCT-------GEDLLSLI-LDTRLTCVAFDGTEDNIYM-------GTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGH  278 (343)
Q Consensus       214 ~~~-------~~~~~~~~-~~~~i~~~~~~~~~~~l~~-------~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~  278 (343)
                      ...       ++....+. |...+..++|+|++++|++       +..+++|++||+.+.+.......  ......+..|
T Consensus       283 ~~~~~~~~~~~~~~~~l~g~~~~v~~v~~sPdg~~l~v~~~~~~s~~~~~tv~vwd~~t~~~~~~~~~--~~~~~~~~~~  360 (426)
T d1hzua2         283 TDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLP--IAEWADLGEG  360 (426)
T ss_dssp             CCTTTCTTTBTSEEEEEECSSSCCCCEECCTTCSEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEEC--HHHHHCCCSS
T ss_pred             ccccccccccceEeEEEecCCCceeEEEcCCCCceEEEeecCCCCcccCCEEEEEECCCCCcCeEEec--cchhcccCCC
Confidence            443       35666666 5677999999999999995       45578999999988665432200  0001123346


Q ss_pred             cCcEEEEEEccCCCEEE-EE----eCCCcEEEEecccceeeeecccCCceEEEEEccCCCeee
Q psy10867        279 EKQVTSLSCSITGITLL-SS----SADETLKIWHTISRQCLRTIQHKGPVLGAFLGLLPPAIH  336 (343)
Q Consensus       279 ~~~v~~~~~s~~~~~l~-s~----~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~  336 (343)
                      ...+.+++|||||++++ ++    +.++.|+|||.++++....++...     .++|+|++-+
T Consensus       361 ~~rv~~~~fSpDGk~i~vs~~~~~~~~~~i~v~D~~T~k~~~~i~~~~-----~~tp~Gk~~~  418 (426)
T d1hzua2         361 AKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAVVKDPR-----LITPTGKFNV  418 (426)
T ss_dssp             CCCEEEEEECSSSSEEEEEECCCTTSCCEEEEEETTTTEEEEEECCTT-----CCSEEEEEEH
T ss_pred             CccEEEEEECCCCCEEEEEEecCCCCCCeEEEEECCCCeEEEEECCCC-----ccCCCceEeE
Confidence            67799999999999774 32    357889999999999888887322     4467777754

>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]

Probab=99.94  E-value=2.7e-23  Score=170.85  Aligned_cols=291  Identities=10%  Similarity=-0.015  Sum_probs=202.8

Q ss_pred             ccceEEEecCC-------------CCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEc----------CCCe
Q psy10867          3 LLNEVAFSYDG-------------SGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEK----------GKPM   59 (343)
Q Consensus         3 ~v~~~~~s~~~-------------dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~----------~~~~   59 (343)
                      ++..++++|++             .+.|.+||..+++.+.++..+..   ..++|+|||+.++++.          .++.
T Consensus        22 p~~~~a~spdg~~~~~~~~~~~~~~~~v~v~D~~tg~~~~~~~~~~~---~~~a~SpDG~~l~va~~~~~~~~~~~~~~~   98 (373)
T d2madh_          22 PTNDEAPGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFL---PNPVAAHSGSEFALASTSFSRIAKGKRTDY   98 (373)
T ss_pred             CccccccCCCCCEEEEEcccccCCCceEEEEECCCCCEEEEEeCCCC---ccEEEcCCCCEEEEEeecCCcccccccceE
Confidence            45566666666             25689999999999999887764   3799999998887764          3478


Q ss_pred             EEEEeCCCcccceecccCCcce-------EEEEECCCCCEEEE---ecCCeEEEEEccCCceEEEecccCCCeEEEEEec
Q psy10867         60 IQAWPVNSQEKAQLRLICPGRI-------SSMQASPDAAYIAV---SIETKLHMWQISSGRLLATASSHYQPITIVKWSA  129 (343)
Q Consensus        60 i~iw~~~~~~~~~~~~~~~~~v-------~~~~~s~~~~~l~~---~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~  129 (343)
                      |.+||..+++.+.....+....       ..+.|+++++.++.   ..++.+.+|+..+.+.....    ....++.++|
T Consensus        99 v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~s~  174 (373)
T d2madh_          99 VEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVVQGGSSDDQLL----SSPTCYHIHP  174 (373)
T ss_pred             EEEEECCCCcEEEEEecCCcceeEeccCCCcEEEEeCCCcEEEEEEcCCCceEEeeccCCeEEEEe----ccceeEEEec
Confidence            9999999998876555444332       45788888887664   23568889998877655443    3456889999


Q ss_pred             CCCE-EEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCe
Q psy10867        130 DSNF-IVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRT  208 (343)
Q Consensus       130 ~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~  208 (343)
                      +++. +++.+.|+.+.+|+...........                ..............+.+.+++   .++..+.++.
T Consensus       175 ~g~~~~v~~~~dg~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~  235 (373)
T d2madh_         175 GAPSTFYLLCAQGGLAKTDHAGGAAGAGLV----------------GAMLTAAQNLLTQPAQANKSG---RIVWPVYSGK  235 (373)
T ss_pred             CCCcEEEEEcCCCeEEEEEcCCceeeEEEe----------------eeccccCccceeeeEEECCCc---eEEEecCCce
Confidence            8875 4678899999999998876554332                111111222223344555544   4566678889


Q ss_pred             EEEEecCCCceEEEee-------------cCCcEEEEEEcCCCCEEE----------EEcCCCcEEEEEeeccccccccc
Q psy10867        209 CKIFDLCTGEDLLSLI-------------LDTRLTCVAFDGTEDNIY----------MGTSEGVIKSFCLRQVPRTRDHH  265 (343)
Q Consensus       209 i~~wd~~~~~~~~~~~-------------~~~~i~~~~~~~~~~~l~----------~~~~d~~i~i~d~~~~~~~~~~~  265 (343)
                      +.+|+...........             .......+++++++..++          ....++.+.+||..+.+...   
T Consensus       236 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~d~~t~~~~~---  312 (373)
T d2madh_         236 ILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSS---  312 (373)
T ss_pred             EEEEEcCCCeEEEEEeeccccCcEEeeeeccCcceeeEEecCCCeEEEecCCCceEEeecCCCeEEEEECCCCcEEE---
Confidence            9999987765432221             122344566666666554          34556678899987765432   


Q ss_pred             ccCCCCCCccccccCcEEEEEEccCCCE--EEEEeCCCcEEEEecccceeeeecc-cCCceEEEEEccC
Q psy10867        266 IQDSTSNPDFIGHEKQVTSLSCSITGIT--LLSSSADETLKIWHTISRQCLRTIQ-HKGPVLGAFLGLL  331 (343)
Q Consensus       266 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~--l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~  331 (343)
                              .+ .+...+..++|+|||+.  +++++.|+.|++||+.+++.+.++. +....+.+++.++
T Consensus       313 --------~~-~~~~~~~~~a~spDG~~~l~vt~~~d~~v~v~D~~tg~~~~~~~~~g~~P~~l~~~~~  372 (373)
T d2madh_         313 --------QI-SLGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQSTVELGSGPQVLSVMNE  372 (373)
T ss_pred             --------Ee-cCCCCeeEEEECCCCCEEEEEEeCCCCeEEEEECCCCCEEEEECCCCCCCcEEEEecC
Confidence                    22 35567899999999984  4688999999999999999999998 7777888877654

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.94  E-value=9e-25  Score=177.00  Aligned_cols=253  Identities=7%  Similarity=-0.007  Sum_probs=185.2

Q ss_pred             eEEEEEcCCCeEEEEeCCCcccceeccc--CCcceEEEEECCCCCEEE-E-ecCCeEEEEEccCCceEEEecccCC----
Q psy10867         49 YVLGVEKGKPMIQAWPVNSQEKAQLRLI--CPGRISSMQASPDAAYIA-V-SIETKLHMWQISSGRLLATASSHYQ----  120 (343)
Q Consensus        49 ~~~~~~~~~~~i~iw~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~-~-~~d~~i~v~~~~~~~~~~~~~~~~~----  120 (343)
                      .++++++.|++|++||+.+++.+..+..  +...+..++|+|||++++ + +.++.|.+||+.+++.+..+..+..    
T Consensus         2 ~~~vt~~~d~~v~v~D~~s~~~~~~i~~~~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~   81 (337)
T d1pbyb_           2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV   81 (337)
T ss_dssp             EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred             eEEEEEcCCCEEEEEECCCCeEEEEEECCCCCCCccEEEECCCCCEEEEEECCCCeEEEEECCCCcEEEEEecCCCcccc
Confidence            4677777779999999999998866643  345678999999999875 4 4689999999999999888765543    


Q ss_pred             -CeEEEEEecCCCEEEEecC------------CCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceE
Q psy10867        121 -PITIVKWSADSNFIVTGGE------------DGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVT  187 (343)
Q Consensus       121 -~v~~~~~~~~~~~l~s~~~------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  187 (343)
                       .+..++|+|++++++++..            +..+.+||..+......+                       .+...+.
T Consensus        82 ~~~~~v~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-----------------------~~~~~~~  138 (337)
T d1pbyb_          82 KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAF-----------------------EAPRQIT  138 (337)
T ss_dssp             ECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEE-----------------------ECCSSCC
T ss_pred             cceeeEEEcCCCcEEEEeecCCcceeeeccccccceeeccccCCeEEEec-----------------------cccCCce
Confidence             3457899999999988763            567888888876544332                       2445678


Q ss_pred             EEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEE------------------------E
Q psy10867        188 HVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIY------------------------M  243 (343)
Q Consensus       188 ~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~------------------------~  243 (343)
                      .++|+|++  .++++++.+  +.+||..+++....+..........+.|++..+.                        .
T Consensus       139 ~~~~s~dg--~~l~~~~~~--~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (337)
T d1pbyb_         139 MLAWARDG--SKLYGLGRD--LHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADP  214 (337)
T ss_dssp             CEEECTTS--SCEEEESSS--EEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSG
T ss_pred             EEEEcCCC--CEEEEEcCC--cceeeeecCcEEEEeecCCccccceecCCcceeeccccccceeeeeeeeeeeccceeee
Confidence            89999999  778877644  6789999998887776433322233333332221                        1


Q ss_pred             EcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecccCCce
Q psy10867        244 GTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQHKGPV  323 (343)
Q Consensus       244 ~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v  323 (343)
                      +..++.+.+|+.......          ...+..+...+..+.++|++.+++.+  ++.|++||+.+++.+..+.+...+
T Consensus       215 ~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~v~d~~~~~~~~~~~~~~~~  282 (337)
T d1pbyb_         215 TAYRTGLLTMDLETGEMA----------MREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLPHSY  282 (337)
T ss_dssp             GGEEEEEEEEETTTCCEE----------EEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECSSCC
T ss_pred             cccCccEEEEEcCCCcEE----------EEEecCCCcceEEEEecccceEEEEc--cccEEEEECCCCcEEEEEcCCCCE
Confidence            222334666665543221          12344566778889999999988766  478999999999999999988889


Q ss_pred             EEEEEccCCCeeeeccc
Q psy10867        324 LGAFLGLLPPAIHDYDF  340 (343)
Q Consensus       324 ~~~~~sp~~~~l~~~~~  340 (343)
                      .+++|+|||++|++++.
T Consensus       283 ~~~~~s~dG~~l~v~~~  299 (337)
T d1pbyb_         283 YSVNVSTDGSTVWLGGA  299 (337)
T ss_dssp             CEEEECTTSCEEEEESB
T ss_pred             EEEEECCCCCEEEEEeC
Confidence            99999999999998764

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=99.93  E-value=5.5e-25  Score=178.93  Aligned_cols=274  Identities=9%  Similarity=-0.060  Sum_probs=193.1

Q ss_pred             EEEeCCceEEEEEcCCCeEEEEeCCCcccceecc-cCCcceEEEEECCCCCEEEE-e-cCCeEEEEEccCCceEEEeccc
Q psy10867         42 MCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRL-ICPGRISSMQASPDAAYIAV-S-IETKLHMWQISSGRLLATASSH  118 (343)
Q Consensus        42 ~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~-~-~d~~i~v~~~~~~~~~~~~~~~  118 (343)
                      ++|+++++++++++.++.|.+||+.+++.+..+. .+...+.+++|+|||+++++ + .++.|++||+.+++.+..+...
T Consensus         2 ~a~~~~~~~l~~~~~~~~v~v~D~~t~~~~~t~~~~~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~~~~~~~~~~   81 (346)
T d1jmxb_           2 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLS   81 (346)
T ss_dssp             CCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESC
T ss_pred             ccCCCCCcEEEEEcCCCEEEEEECCCCCEEEEEEcCCCCCcceEEECCCCCEEEEEECCCCcEEEEeCccCeeeeeeccc
Confidence            4789999999999999999999999999887654 55667889999999998754 3 6789999999999888766532


Q ss_pred             C------CCeEEEEEecCCCEEEEec------------CCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeec
Q psy10867        119 Y------QPITIVKWSADSNFIVTGG------------EDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKS  180 (343)
Q Consensus       119 ~------~~v~~~~~~~~~~~l~s~~------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (343)
                      .      ..+..++|+|||+++++++            .++.+.+|+..++.....+                   .. .
T Consensus        82 ~~~~~~~~~~~~v~~s~DG~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-------------------~~-~  141 (346)
T d1jmxb_          82 SVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPV-------------------RT-F  141 (346)
T ss_dssp             CSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCS-------------------EE-E
T ss_pred             ccccccCCceEEEEEecCCCEEEEEecCCcceeeeeccCcceEEEEecccceeeeEE-------------------Ee-e
Confidence            2      2356789999999888765            4677888888776443221                   11 1


Q ss_pred             ccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEE-cCCCcEEEEEeeccc
Q psy10867        181 QHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMG-TSEGVIKSFCLRQVP  259 (343)
Q Consensus       181 ~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~  259 (343)
                      .....+..+.+++++  .+++++   +.+.+|+..+++.+..+........+.++|++..++.. ..++.+.+++.....
T Consensus       142 ~~~~~~~~~~~~~~~--~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (346)
T d1jmxb_         142 PMPRQVYLMRAADDG--SLYVAG---PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARF  216 (346)
T ss_dssp             ECCSSCCCEEECTTS--CEEEES---SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC
T ss_pred             eccCceEEEEecCCC--EEEEeC---CcceEEEccCCCEEEEEecCCCccceEEeccccEEEEEecCCCceEeeeeeeee
Confidence            122345556677776  455442   56899999999998888766666666777776655433 223344443332211


Q ss_pred             cccc--------------ccccCCC-CCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecccCCceE
Q psy10867        260 RTRD--------------HHIQDST-SNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQHKGPVL  324 (343)
Q Consensus       260 ~~~~--------------~~~~~~~-~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~  324 (343)
                      ....              ....... .......|...+..+.+++++.+++.... +.|++||..+++.+..+.+...+.
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~v~d~~~~~~~~~~~~~~~~~  295 (346)
T d1jmxb_         217 KDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGVL-NRLAKYDLKQRKLIKAANLDHTYY  295 (346)
T ss_dssp             -------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEEE-SEEEEEETTTTEEEEEEECSSCCC
T ss_pred             ccCceeEeeccCCceEEEEECCCCceEEEEeecccceeEEEEEeCCCCEEEEecC-CeEEEEECCCCcEEEEEcCCCCEE
Confidence            0000              0000000 01224456778888999999888887765 579999999999999988777899


Q ss_pred             EEEEccCCCeeeecccC
Q psy10867        325 GAFLGLLPPAIHDYDFT  341 (343)
Q Consensus       325 ~~~~sp~~~~l~~~~~~  341 (343)
                      +++|+|||++|++++..
T Consensus       296 ~va~s~DG~~l~v~~~d  312 (346)
T d1jmxb_         296 CVAFDKKGDKLYLGGTF  312 (346)
T ss_dssp             EEEECSSSSCEEEESBS
T ss_pred             EEEEcCCCCEEEEEeCC
Confidence            99999999999998753

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.93  E-value=1.6e-23  Score=174.95  Aligned_cols=203  Identities=10%  Similarity=-0.035  Sum_probs=152.3

Q ss_pred             eCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCCce--EEEe---ccc
Q psy10867         45 LGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGRL--LATA---SSH  118 (343)
Q Consensus        45 ~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~--~~~~---~~~  118 (343)
                      +++..++++.+++|.|.|||..+++.+..+..+ ..+..++|||||+++++ +.|+.+++||+.+++.  ...+   ..|
T Consensus        29 ~~~~~~~v~~~d~g~v~v~D~~t~~v~~~~~~g-~~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~~~~~i~~~~~~  107 (432)
T d1qksa2          29 DLENLFSVTLRDAGQIALIDGSTYEIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEA  107 (432)
T ss_dssp             CGGGEEEEEETTTTEEEEEETTTCCEEEEEECS-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEE
T ss_pred             CCCcEEEEEEcCCCEEEEEECCCCcEEEEEeCC-CCeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCceEEEEEecCCCC
Confidence            445566788888899999999999999877665 46999999999999997 6799999999988763  2232   345


Q ss_pred             CCCeEEEEEecCCCEE-EEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCc
Q psy10867        119 YQPITIVKWSADSNFI-VTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAK  197 (343)
Q Consensus       119 ~~~v~~~~~~~~~~~l-~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  197 (343)
                      .+.+.+..|+|||++| ++++.++.|++||..+++....+.......           ......+......+.++|++. 
T Consensus       108 ~~~~~s~~~SpDG~~l~vs~~~~~~v~i~d~~t~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~v~~s~dg~-  175 (432)
T d1qksa2         108 RSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTY-----------DEQEYHPEPRVAAILASHYRP-  175 (432)
T ss_dssp             EEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECT-----------TTCCEESCCCEEEEEECSSSS-
T ss_pred             CCeEEecccCCCCCEEEEEcCCCCeEEEEeCccccceeeeccCCccc-----------cceeccCCCceeEEEECCCCC-
Confidence            5666667788899976 678889999999999987766543110000           000112455677889999985 


Q ss_pred             eEEEEeeCCCeEEEEecCCCceE--EEeecCCcEEEEEEcCCCCEEEEEcC-CCcEEEEEeecccc
Q psy10867        198 SRVASVSHDRTCKIFDLCTGEDL--LSLILDTRLTCVAFDGTEDNIYMGTS-EGVIKSFCLRQVPR  260 (343)
Q Consensus       198 ~~l~~~~~d~~i~~wd~~~~~~~--~~~~~~~~i~~~~~~~~~~~l~~~~~-d~~i~i~d~~~~~~  260 (343)
                      .++++...++.+.+||..+.+..  ..+.....+..++|+|+|+++++++. ++.+.++|......
T Consensus       176 ~~~vs~~~~~~i~~~d~~~~~~~~~~~i~~g~~~~~~~~spdg~~~~va~~~~~~v~v~d~~~~~~  241 (432)
T d1qksa2         176 EFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKL  241 (432)
T ss_dssp             EEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEE
T ss_pred             EEEEEEccCCeEEEEEccCCCcceEEEEcccCccccceECCCCCEEEEeccccceEEEeecccceE
Confidence            55677788999999999887754  44556778999999999998877655 56788888765443

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.91  E-value=1.2e-22  Score=165.74  Aligned_cols=275  Identities=12%  Similarity=0.077  Sum_probs=186.4

Q ss_pred             CCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEE----------cCCCeEEEEeCCCcccceecccCC-----
Q psy10867         14 SGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVE----------KGKPMIQAWPVNSQEKAQLRLICP-----   78 (343)
Q Consensus        14 dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~----------~~~~~i~iw~~~~~~~~~~~~~~~-----   78 (343)
                      ++.|.+||..+++.+.++..+..   ..++|+|||+.+++.          ..++.|++||..+++.+.....+.     
T Consensus        27 ~~~v~v~D~~tg~~~~~~~~g~~---~~~a~SpDg~~l~v~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~~~~~~~~~~~  103 (355)
T d2bbkh_          27 VTQQFVIDGEAGRVIGMIDGGFL---PNPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFL  103 (355)
T ss_dssp             SEEEEEEETTTTEEEEEEEECSS---CEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCC
T ss_pred             cCeEEEEECCCCcEEEEEECCCC---CceEEcCCCCEEEEEeCCCccccccCCCCEEEEEECCCCCEEEEEecCCcceee
Confidence            46799999999999999987654   479999999866543          235789999999988765443221     


Q ss_pred             --cceEEEEECCCCCEEEE---ecCCeEEEEEccCCceEEEecccCC-------CeEEEEEecCCCEEEEec-CCCeEEE
Q psy10867         79 --GRISSMQASPDAAYIAV---SIETKLHMWQISSGRLLATASSHYQ-------PITIVKWSADSNFIVTGG-EDGTICV  145 (343)
Q Consensus        79 --~~v~~~~~s~~~~~l~~---~~d~~i~v~~~~~~~~~~~~~~~~~-------~v~~~~~~~~~~~l~s~~-~dg~i~i  145 (343)
                        .....++|+|++++++.   +.+..+.+|+..+++.+..+..+..       ....+.++++++.++... .++.+.+
T Consensus       104 ~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~v~~~~~~~~~~  183 (355)
T d2bbkh_         104 VGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEI  183 (355)
T ss_dssp             BSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSCEEEEECCSSSCCEE
T ss_pred             cCCCCceEEEecCCCeeEEecCCCCceeeeeecCCCcEeeEEecCCcceEeecCCcceEEEcCCCCEEEEEecCCCeEEE
Confidence              22356899999998775   3457899999999988877764432       122344444444433322 2233333


Q ss_pred             eecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-
Q psy10867        146 WQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-  224 (343)
Q Consensus       146 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-  224 (343)
                      ++.....                           ..+...+....+.+++  ..++.++.++.+++|++..++...... 
T Consensus       184 ~~~~~~~---------------------------~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~  234 (355)
T d2bbkh_         184 THTEVFH---------------------------PEDEFLINHPAYSQKA--GRLVWPTYTGKIHQIDLSSGDAKFLPAV  234 (355)
T ss_dssp             EECCCCS---------------------------CTTSCBCSCCEEETTT--TEEEEEBTTSEEEEEECTTSSCEECCCE
T ss_pred             Eeccccc---------------------------ceecceeeeccccCCC--CeEEEecCCCeEEEEecCCCcEEEEecc
Confidence            3332211                           1233344556677766  678888999999999998776432111 


Q ss_pred             ------------cCCcEEEEEEcCCCCEEEEEcCC----------CcEEEEEeecccccccccccCCCCCCccccccCcE
Q psy10867        225 ------------LDTRLTCVAFDGTEDNIYMGTSE----------GVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQV  282 (343)
Q Consensus       225 ------------~~~~i~~~~~~~~~~~l~~~~~d----------~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v  282 (343)
                                  .......+++++++..++....+          ..|.+||..+.+...           .+. +...+
T Consensus       235 ~~~~~~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~v~d~~t~~~~~-----------~~~-~~~~~  302 (355)
T d2bbkh_         235 EALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLA-----------KFE-MGHEI  302 (355)
T ss_dssp             ESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEE-----------EEE-EEEEE
T ss_pred             CCcccceEeeeeeccceEEEEEeCCCCeEEEEeccCCceeecCCCCeEEEEeCCCCcEEE-----------Eec-CCCCE
Confidence                        01223458899999988876543          368999988755432           222 34568


Q ss_pred             EEEEEccCCC--EEEEEeCCCcEEEEecccceeeeecc-cCCceEEEEEccCC
Q psy10867        283 TSLSCSITGI--TLLSSSADETLKIWHTISRQCLRTIQ-HKGPVLGAFLGLLP  332 (343)
Q Consensus       283 ~~~~~s~~~~--~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~  332 (343)
                      .+++|+|||+  ++++++.|+.|++||+++++.++++. +......+.+.++|
T Consensus       303 ~~~a~spDG~~~l~v~~~~d~~i~v~D~~tg~~~~~i~~~G~~p~~i~~~d~~  355 (355)
T d2bbkh_         303 DSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHGPQVITTADMG  355 (355)
T ss_dssp             CEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEECCCCSSCCEEECCCCC
T ss_pred             EEEEEcCCCCeEEEEEECCCCEEEEEECCCCCEEEEEeCcCCCccEEEeCCCC
Confidence            8999999997  45677789999999999999999997 55555666655543

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=99.90  E-value=2.7e-21  Score=156.17  Aligned_cols=269  Identities=13%  Similarity=0.138  Sum_probs=180.8

Q ss_pred             eEEEEEcCCCeEEEEeCCCccccee--cccCCcceEEEEECCCCCEEEE-e-cCCeEEEEEccCCceEEEe---cccCCC
Q psy10867         49 YVLGVEKGKPMIQAWPVNSQEKAQL--RLICPGRISSMQASPDAAYIAV-S-IETKLHMWQISSGRLLATA---SSHYQP  121 (343)
Q Consensus        49 ~~~~~~~~~~~i~iw~~~~~~~~~~--~~~~~~~v~~~~~s~~~~~l~~-~-~d~~i~v~~~~~~~~~~~~---~~~~~~  121 (343)
                      .+++++.++++|++|++++...+..  ...+.+.+..++|+|||++|++ + .++.|++|++........+   ..+...
T Consensus         5 ~v~v~~~~~~~I~v~~~~~~~~l~~~~~~~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~~~~~~~~~~~~   84 (333)
T d1ri6a_           5 TVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGS   84 (333)
T ss_dssp             EEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSC
T ss_pred             EEEEECCCCCcEEEEEEcCCCCeEEEEEEcCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCcEEEeeecccCCC
Confidence            4556777779999999876543322  2367889999999999998865 4 4799999999866433222   223455


Q ss_pred             eEEEEEecCCCEEEEecC-CCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEE
Q psy10867        122 ITIVKWSADSNFIVTGGE-DGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRV  200 (343)
Q Consensus       122 v~~~~~~~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l  200 (343)
                      +..++|+|||++|++++. ++.+.+|+........                    ......+...+.++.++|++  +++
T Consensus        85 p~~l~~spDg~~l~v~~~~~~~v~~~~~~~~~~~~--------------------~~~~~~~~~~~~~v~~s~d~--~~~  142 (333)
T d1ri6a_          85 LTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVG--------------------VVDVVEGLDGCHSANISPDN--RTL  142 (333)
T ss_dssp             CSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEE--------------------EEEEECCCTTBCCCEECTTS--SEE
T ss_pred             ceEEEEcCCCCEEeecccCCCceeeecccccccee--------------------cccccCCCccceEEEeeecc--eee
Confidence            678999999999988874 6789999887654322                    22334566678889999999  555


Q ss_pred             EEee-CCCeEEEEecCCCceEEEe-------ecCCcEEEEEEcCCCCEEEEEc-CCCcEEEEEeecccccccccccCCCC
Q psy10867        201 ASVS-HDRTCKIFDLCTGEDLLSL-------ILDTRLTCVAFDGTEDNIYMGT-SEGVIKSFCLRQVPRTRDHHIQDSTS  271 (343)
Q Consensus       201 ~~~~-~d~~i~~wd~~~~~~~~~~-------~~~~~i~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~  271 (343)
                      +.++ .+..+.+|+..........       ........++|++++.+++... ..+...+++............. ...
T Consensus       143 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~g~~p~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~~  221 (333)
T d1ri6a_         143 WVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQT-LDM  221 (333)
T ss_dssp             EEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEE-EEC
T ss_pred             eccccccceeeEEEeccCCcceeeeceeeeeecCCCccEEEEeccceeEEeeccccCceEEEeecccccceeeeee-eee
Confidence            5554 5677999998765433221       1345578999999999887654 5667788876543221110000 000


Q ss_pred             CCccccccCcEEEEEEccCCCEEEE-EeCCCcEEEEecccceeeeecc----cCCceEEEEEccCCCeeeeccc
Q psy10867        272 NPDFIGHEKQVTSLSCSITGITLLS-SSADETLKIWHTISRQCLRTIQ----HKGPVLGAFLGLLPPAIHDYDF  340 (343)
Q Consensus       272 ~~~~~~~~~~v~~~~~s~~~~~l~s-~~~dg~i~iwd~~~~~~~~~~~----~~~~v~~~~~sp~~~~l~~~~~  340 (343)
                      .............+++++++++++. +..++.+.+|++........+.    ....+.+++|+|||++|++++.
T Consensus       222 ~~~~~~~~~~~~~~~~s~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~spDGk~l~va~~  295 (333)
T d1ri6a_         222 MPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQ  295 (333)
T ss_dssp             SCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEECT
T ss_pred             eecCCCccccceeEEEecccCceeeecccCCeEEEEEEcCCCCEEEEEEEeCCCCCeeEEEEeCCCCEEEEEEC
Confidence            0011123345677899999987664 4567889999987554333222    4566789999999999887753

>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]

Probab=99.88  E-value=1.9e-19  Score=147.66  Aligned_cols=272  Identities=7%  Similarity=-0.140  Sum_probs=185.3

Q ss_pred             cCCCCcceEEEEeCCceEEEEEc-----CCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEEe-----------
Q psy10867         33 GASVLSPHSMCLLGNDYVLGVEK-----GKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVS-----------   96 (343)
Q Consensus        33 ~~~~~~v~~~~~~~~~~~~~~~~-----~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-----------   96 (343)
                      .+.. ++.+++++|||+.++...     ..+.+.+||..+++.+..+..+..  ..++|+|||++|++.           
T Consensus        18 ~~~~-p~~~~a~spdg~~~~~~~~~~~~~~~~v~v~D~~tg~~~~~~~~~~~--~~~a~SpDG~~l~va~~~~~~~~~~~   94 (373)
T d2madh_          18 AADG-PTNDEAPGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFL--PNPVAAHSGSEFALASTSFSRIAKGK   94 (373)
T ss_pred             cCCC-CccccccCCCCCEEEEEcccccCCCceEEEEECCCCCEEEEEeCCCC--ccEEEcCCCCEEEEEeecCCcccccc
Confidence            4556 889999999997765532     235799999999998876655443  379999999998863           


Q ss_pred             cCCeEEEEEccCCceEEEecccCCCe-------EEEEEecCCCEEEEec--CCCeEEEeecCccceeeeeecCCCCCCCC
Q psy10867         97 IETKLHMWQISSGRLLATASSHYQPI-------TIVKWSADSNFIVTGG--EDGTICVWQLSRLICKQTVAFGIPGSSGK  167 (343)
Q Consensus        97 ~d~~i~v~~~~~~~~~~~~~~~~~~v-------~~~~~~~~~~~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~  167 (343)
                      .++.|.+||..+++.+..+..+....       ..+.|+++++.++...  .++.+.+|+....+..             
T Consensus        95 ~~~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~-------------  161 (373)
T d2madh_          95 RTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVVQGGSSDD-------------  161 (373)
T ss_pred             cceEEEEEECCCCcEEEEEecCCcceeEeccCCCcEEEEeCCCcEEEEEEcCCCceEEeeccCCeEE-------------
Confidence            24679999999999988876655443       4567888888665543  4567888887765322             


Q ss_pred             ccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeec-------CCcEEEEEEcCCCCE
Q psy10867        168 GVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLIL-------DTRLTCVAFDGTEDN  240 (343)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~-------~~~i~~~~~~~~~~~  240 (343)
                                   .+.....++.++|++. ..+++.+.|+.+.+|+...++.......       ........+.+++.+
T Consensus       162 -------------~~~~~~~~~~~s~~g~-~~~v~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (373)
T d2madh_         162 -------------QLLSSPTCYHIHPGAP-STFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRI  227 (373)
T ss_pred             -------------EEeccceeEEEecCCC-cEEEEEcCCCeEEEEEcCCceeeEEEeeeccccCccceeeeEEECCCceE
Confidence                         2334466889999985 5678889999999999988877665431       112344556665554


Q ss_pred             EEEEcCCCcEEEEEeecccccccccccCCC-CCCccccccCcEEEEEEccCCCE----------EEEEeCCCcEEEEecc
Q psy10867        241 IYMGTSEGVIKSFCLRQVPRTRDHHIQDST-SNPDFIGHEKQVTSLSCSITGIT----------LLSSSADETLKIWHTI  309 (343)
Q Consensus       241 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~~~s~~~~~----------l~s~~~dg~i~iwd~~  309 (343)
                      + ..+.++.+.+|+................ ..............+++++++..          +++...++.+.+||..
T Consensus       228 ~-~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~d~~  306 (373)
T d2madh_         228 V-WPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGL  306 (373)
T ss_pred             E-EecCCceEEEEEcCCCeEEEEEeeccccCcEEeeeeccCcceeeEEecCCCeEEEecCCCceEEeecCCCeEEEEECC
Confidence            4 4557888999987764322111100000 00000011122334555665554          4455667789999999


Q ss_pred             cceeeeecccCCceEEEEEccCCCee
Q psy10867        310 SRQCLRTIQHKGPVLGAFLGLLPPAI  335 (343)
Q Consensus       310 ~~~~~~~~~~~~~v~~~~~sp~~~~l  335 (343)
                      +++.+..+.+...+..++|+|||+.+
T Consensus       307 t~~~~~~~~~~~~~~~~a~spDG~~~  332 (373)
T d2madh_         307 VGQTSSQISLGHDVDAISVAQDGGPD  332 (373)
T ss_pred             CCcEEEEecCCCCeeEEEECCCCCEE
Confidence            99999999988889999999999964

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.86  E-value=6.7e-20  Score=150.11  Aligned_cols=285  Identities=10%  Similarity=-0.016  Sum_probs=188.4

Q ss_pred             EEEecCCC--CeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEc----------CCCeEEEEeCCCcccceec
Q psy10867          7 VAFSYDGS--GAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEK----------GKPMIQAWPVNSQEKAQLR   74 (343)
Q Consensus         7 ~~~s~~~d--g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~----------~~~~i~iw~~~~~~~~~~~   74 (343)
                      +.+..+.+  ..|.+||..+++.+..+..+.. .  .++|+|||+.++..+          .++.|++||..+++.+...
T Consensus        36 v~~~~~~~g~~~~~~~d~~~~~~~~~~~~~~~-~--~~a~spDg~~i~~~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~i  112 (368)
T d1mdah_          36 ITLPAYFAGTTENWVSCAGCGVTLGHSLGAFL-S--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADI  112 (368)
T ss_dssp             EEECTTTCSSEEEEEEETTTTEEEEEEEECTT-C--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEE
T ss_pred             EEeeccCCCcceEEEEeCCCCcEEEEEeCCCC-C--cceECCCCCEEEEEcccCccccccccCCeEEEEECCCCcEeeee
Confidence            34444444  4577779999999999888765 3  689999998777643          2467999999998877544


Q ss_pred             ccCC-------cceEEEEECCCCCEEEEe--cCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEE
Q psy10867         75 LICP-------GRISSMQASPDAAYIAVS--IETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICV  145 (343)
Q Consensus        75 ~~~~-------~~v~~~~~s~~~~~l~~~--~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~i  145 (343)
                      ..+.       .....++|+|||++|+.+  .++.+.+||+.+++....+..+.....   +......++..+.||.+.+
T Consensus       113 ~~p~~~~~~~g~~p~~~a~SpDGk~l~va~~~~~~v~~~d~~~~~~~~~~~~~~~~~~---~~~~~~~~v~~~~Dg~~~~  189 (368)
T d1mdah_         113 ELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHI---HPGAAATHYLGSCPASLAA  189 (368)
T ss_dssp             EETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEEEEEEECSSCCCC---EEEETTEEECCCCTTSCEE
T ss_pred             cCCccceecccCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcEeEEeeccCcceE---ccCCCceEEEEcCCCCEEE
Confidence            3221       223468999999988763  578999999999998888766544321   1123456677788888888


Q ss_pred             eecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeec
Q psy10867        146 WQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLIL  225 (343)
Q Consensus       146 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~  225 (343)
                      +++..........                .......+...+....+.+++  ..+.+.  .+.+.+++...++.......
T Consensus       190 ~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~g--~~~~~~--~~~v~~~~~~~~~~~~~~~~  249 (368)
T d1mdah_         190 SDLAAAPAAAGIV----------------GAQCTGAQNCSSQAAQANYPG--MLVWAV--ASSILQGDIPAAGATMKAAI  249 (368)
T ss_dssp             EECCSSCCCCEEC----------------CCCSCTTSCBCSCCEEETTTT--EEEECB--SSCCEEEECCSSCCEEECCC
T ss_pred             EEecCCceeeeee----------------ecccccccccceeecccccCc--EEEEec--CCCEEEEeecCCceEEEeec
Confidence            8877653322211                111122334445556666766  444433  45566666655544332211


Q ss_pred             -------------CCcEEEEEEcCCCCEEEEEcCC---------CcEEEEEeecccccccccccCCCCCCccccccCcEE
Q psy10867        226 -------------DTRLTCVAFDGTEDNIYMGTSE---------GVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVT  283 (343)
Q Consensus       226 -------------~~~i~~~~~~~~~~~l~~~~~d---------~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  283 (343)
                                   ......++++|++..+++...+         ..|.+||..+.+...           .+. +...+.
T Consensus       250 ~~~~~~~~~~~~~~~g~~~~a~~~~~~~~~v~~~~~~~~~~~~~~~v~v~D~~t~~~~~-----------~~~-~~~~~~  317 (368)
T d1mdah_         250 DGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSG-----------PIS-NGHDSD  317 (368)
T ss_dssp             CSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEE-----------CCE-EEEEEC
T ss_pred             ccccceeeeeeecCCCceeEEEcCCCCEEEEEecCCCceeecCCceEEEEECCCCcEeE-----------Eec-CCCcee
Confidence                         1123457899999888775432         358899988765432           222 345788


Q ss_pred             EEEEccCCC--EEEEEeCCCcEEEEecccceeeeecccCCceEEEEEc
Q psy10867        284 SLSCSITGI--TLLSSSADETLKIWHTISRQCLRTIQHKGPVLGAFLG  329 (343)
Q Consensus       284 ~~~~s~~~~--~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~s  329 (343)
                      +++|+|||+  +++++..|+.|++||..+++.+.+++.......+++-
T Consensus       318 ~~a~spDG~~~ly~s~~~~~~v~v~D~~tgk~~~~i~~g~~P~~l~~~  365 (368)
T d1mdah_         318 AIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDKGPESLSVQ  365 (368)
T ss_dssp             EEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCCSCCCEEECC
T ss_pred             EEEECCCCCEEEEEEeCCCCeEEEEECCCCCEEEEEECCCCCCEEEEe
Confidence            999999997  3457778899999999999999999844445555553

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

Probab=99.86  E-value=1.7e-21  Score=158.73  Aligned_cols=301  Identities=7%  Similarity=-0.049  Sum_probs=201.5

Q ss_pred             EEecCCCCeEEEEecCCceEEEEEecC------------------------------CCCcceEEEEeCCceEEEE-EcC
Q psy10867          8 AFSYDGSGAISVWEPKGGTLLMSYKGA------------------------------SVLSPHSMCLLGNDYVLGV-EKG   56 (343)
Q Consensus         8 ~~s~~~dg~i~iwd~~~~~~~~~~~~~------------------------------~~~~v~~~~~~~~~~~~~~-~~~   56 (343)
                      .+|++.+|.|++|++.+++.++++...                              .. ......++|||+++.+ ...
T Consensus        14 f~Sgg~sG~V~V~dlpS~r~l~~IpVfspd~~~g~g~~~es~~vl~~~~~~~~gd~hhP-~~s~t~gtpDGr~lfV~d~~   92 (441)
T d1qnia2          14 FWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGITNESKEILGGDQQYLNGDCHHP-HISMTDGRYDGKYLFINDKA   92 (441)
T ss_dssp             EEECBTTCCEEEEEETTTEEEEEECSSSBCTTTCTTTSHHHHHHHCSSSCCSCCCBCCC-EEEEETTEEEEEEEEEEETT
T ss_pred             EEeCCCCCcEEEEeCCCCcEEEEEEeEcCCCCEEEEECCccceEEecccccccCcccCC-CcceecccCCCCEEEEEcCC
Confidence            456666899999999999998886431                              11 2233445689987754 456


Q ss_pred             CCeEEEEeCCCcccceecc-cCCcceEEEEECCCCC--EEEEecCCe------------------EEEEEccCCceEEEe
Q psy10867         57 KPMIQAWPVNSQEKAQLRL-ICPGRISSMQASPDAA--YIAVSIETK------------------LHMWQISSGRLLATA  115 (343)
Q Consensus        57 ~~~i~iw~~~~~~~~~~~~-~~~~~v~~~~~s~~~~--~l~~~~d~~------------------i~v~~~~~~~~~~~~  115 (343)
                      ++.|.++|+.+++..+... .+...+..++|+|+++  +++...+..                  +..+|..+.+....+
T Consensus        93 ~~rVavIDl~t~k~~~ii~iP~g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~~~~~~~~~~~~~~iD~~t~~v~~qI  172 (441)
T d1qnia2          93 NTRVARIRLDIMKTDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDFSLDNSYTMFTAIDAETMDVAWQV  172 (441)
T ss_dssp             TTEEEEEETTTTEEEEEEECTTCCCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCGGGEEEEEEEEETTTCSEEEEE
T ss_pred             CCEEEEEECCCCcEeeEEecCCCCCccceEEeccCCEEEEEeccCCcccccCcccccccccccceEEeecCccceeeEEE
Confidence            7899999999998776543 4567899999999998  454433332                  355888888777666


Q ss_pred             cccCCCeEEEEEecCCCEEEEecCCC-eEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecC
Q psy10867        116 SSHYQPITIVKWSADSNFIVTGGEDG-TICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKL  194 (343)
Q Consensus       116 ~~~~~~v~~~~~~~~~~~l~s~~~dg-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  194 (343)
                      ... +....+.++|+|+++++.+.+. .+..++..+......+                   ...    .....+.+.|+
T Consensus       173 ~v~-~~p~~v~~spdGk~a~vt~~nse~~~~id~~t~~~~d~i-------------------~v~----n~p~~~~~~~d  228 (441)
T d1qnia2         173 IVD-GNLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWV-------------------VVF----NVERIAAAVKA  228 (441)
T ss_dssp             EES-SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSBCEE-------------------EEE----EHHHHHHHHHT
T ss_pred             ecC-CCccceEECCCCCEEEEEecCCCceEEEeccCcceEEEE-------------------EeC----CccceEEEecC
Confidence            543 3567899999999988877653 3333343332221111                   111    11123456788


Q ss_pred             CCceEEEEeeCCCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEE-EcCCCcEEEEEeecccccccccccCCCCCC
Q psy10867        195 GAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYM-GTSEGVIKSFCLRQVPRTRDHHIQDSTSNP  273 (343)
Q Consensus       195 ~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~-~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~  273 (343)
                      +  +++.. +.++.+.+++....+.+..+........+.++|||+++++ +..+++|.+||+.+.....+-.+..   ..
T Consensus       229 G--k~~~v-~~~~v~vvd~~~~~~v~~~IPvgksPhGv~vSPDGkyl~~~~~~~~tvsv~d~~k~~~~~~~~~~~---~~  302 (441)
T d1qnia2         229 G--NFKTI-GDSKVPVVDGRGESEFTRYIPVPKNPHGLNTSPDGKYFIANGKLSPTVSVIAIDKLDDLFEDKIEL---RD  302 (441)
T ss_dssp             T--CCBCC-TTCCCCEEECSSSCSSEEEECCBSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHTTTSSCG---GG
T ss_pred             C--CEEEe-CCCCcEEEEcccCCceEEEEeCCCCccCceECCCCCEEEEeCCcCCcEEEEEeehhhhHhhccCCc---ce
Confidence            8  55544 4567888888777778888887777888999999998866 5679999999998755332211110   11


Q ss_pred             ccccc---cCcEEEEEEccCCCEEEEEeCCCcEEEEecccc----------eeeeecc------cCCceEEEEEccCCCe
Q psy10867        274 DFIGH---EKQVTSLSCSITGITLLSSSADETLKIWHTISR----------QCLRTIQ------HKGPVLGAFLGLLPPA  334 (343)
Q Consensus       274 ~~~~~---~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~----------~~~~~~~------~~~~v~~~~~sp~~~~  334 (343)
                      .+.++   .-.....+|+++|+.+.+...|..|..|++...          ..+..+.      |...+.+.+++|||+|
T Consensus       303 ~~~~~~~~glgplh~~fd~~g~~yts~~~ds~v~kw~~~~~~~~~~~~~~~~v~~~~~v~y~~GH~~~~~~~t~~pdGk~  382 (441)
T d1qnia2         303 TIVAEPELGLGPLHTTFDGRGNAYTTLFIDSQVCKWNIADAIKHYNGDRVNYIRQKLDVQYQPGHNHASLTESRDADGKW  382 (441)
T ss_dssp             GEEECCBCCSCEEEEEECSSSEEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCCCE
T ss_pred             EEEeecccccCcccceecCCceEEEcccccceEEEeccchhhhhhccCCCceeEeccccccCCCCCccccccccCCCCcE
Confidence            11111   122455689999998899999999999998521          2333332      5555566779999999


Q ss_pred             eeecc
Q psy10867        335 IHDYD  339 (343)
Q Consensus       335 l~~~~  339 (343)
                      |++++
T Consensus       383 l~s~~  387 (441)
T d1qnia2         383 LVVLS  387 (441)
T ss_dssp             EEEEE
T ss_pred             EEecC
Confidence            99874

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.84  E-value=6.7e-20  Score=149.28  Aligned_cols=273  Identities=8%  Similarity=-0.098  Sum_probs=175.6

Q ss_pred             ceEEEEeCCceEEEEEc-----CCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-e----------cCCeEE
Q psy10867         39 PHSMCLLGNDYVLGVEK-----GKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-S----------IETKLH  102 (343)
Q Consensus        39 v~~~~~~~~~~~~~~~~-----~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~----------~d~~i~  102 (343)
                      +.-.+.+||++.++...     .++.+.+||..+++.+.....+..  ..++|+|||++|++ +          .++.|+
T Consensus         4 ~~~~a~spdg~~~~v~~~~~~~~~~~v~v~D~~tg~~~~~~~~g~~--~~~a~SpDg~~l~v~~~~~~~~~~g~~d~~v~   81 (355)
T d2bbkh_           4 RILEAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFL--PNPVVADDGSFIAHASTVFSRIARGERTDYVE   81 (355)
T ss_dssp             CBCCCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSS--CEEEECTTSSCEEEEEEEEEETTEEEEEEEEE
T ss_pred             cEeEeeCCCCCEEEEEecccCCCcCeEEEEECCCCcEEEEEECCCC--CceEEcCCCCEEEEEeCCCccccccCCCCEEE
Confidence            33446689997666542     235799999999998876654433  37999999998875 2          267899


Q ss_pred             EEEccCCceEEEecccCC-------CeEEEEEecCCCEEEEec--CCCeEEEeecCccceeeeeecCCCCCCCCcccccc
Q psy10867        103 MWQISSGRLLATASSHYQ-------PITIVKWSADSNFIVTGG--EDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLT  173 (343)
Q Consensus       103 v~~~~~~~~~~~~~~~~~-------~v~~~~~~~~~~~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (343)
                      +||+.+++.+..+..+..       ....++|+|++++++.+.  .+..+.+|+..++.....+...             
T Consensus        82 v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-------------  148 (355)
T d2bbkh_          82 VFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVP-------------  148 (355)
T ss_dssp             EECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECC-------------
T ss_pred             EEECCCCCEEEEEecCCcceeecCCCCceEEEecCCCeeEEecCCCCceeeeeecCCCcEeeEEecC-------------
Confidence            999999998877654322       235689999999877664  5678999999988665544210             


Q ss_pred             ceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEE
Q psy10867        174 EPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSF  253 (343)
Q Consensus       174 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~  253 (343)
                        .............+.+++++. .+++....++.+.+++......    .+...+....+.+++..++.++.++.+++|
T Consensus       149 --~~~~~~~~~~~~~~~~~~dg~-~~~v~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  221 (355)
T d2bbkh_         149 --DCYHIFPTAPDTFFMHCRDGS-LAKVAFGTEGTPEITHTEVFHP----EDEFLINHPAYSQKAGRLVWPTYTGKIHQI  221 (355)
T ss_dssp             --SEEEEEEEETTEEEEEETTSC-EEEEECCSSSCCEEEECCCCSC----TTSCBCSCCEEETTTTEEEEEBTTSEEEEE
T ss_pred             --CcceEeecCCcceEEEcCCCC-EEEEEecCCCeEEEEecccccc----eecceeeeccccCCCCeEEEecCCCeEEEE
Confidence              000000112233455666653 2333334444555555433322    122334556788888999999999999999


Q ss_pred             EeecccccccccccCCCCCC--ccccccCcEEEEEEccCCCEEEEEeCC----------CcEEEEecccceeeeecccCC
Q psy10867        254 CLRQVPRTRDHHIQDSTSNP--DFIGHEKQVTSLSCSITGITLLSSSAD----------ETLKIWHTISRQCLRTIQHKG  321 (343)
Q Consensus       254 d~~~~~~~~~~~~~~~~~~~--~~~~~~~~v~~~~~s~~~~~l~s~~~d----------g~i~iwd~~~~~~~~~~~~~~  321 (343)
                      ++.......... .......  ...........+++++++..++....+          ..|.+||..+++.+.++.+..
T Consensus       222 ~~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~v~d~~t~~~~~~~~~~~  300 (355)
T d2bbkh_         222 DLSSGDAKFLPA-VEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGH  300 (355)
T ss_dssp             ECTTSSCEECCC-EESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE
T ss_pred             ecCCCcEEEEec-cCCcccceEeeeeeccceEEEEEeCCCCeEEEEeccCCceeecCCCCeEEEEeCCCCcEEEEecCCC
Confidence            988654321100 0000000  000111233458899999988765543          369999999999999988777


Q ss_pred             ceEEEEEccCCCe
Q psy10867        322 PVLGAFLGLLPPA  334 (343)
Q Consensus       322 ~v~~~~~sp~~~~  334 (343)
                      .+.+++|+|||+.
T Consensus       301 ~~~~~a~spDG~~  313 (355)
T d2bbkh_         301 EIDSINVSQDEKP  313 (355)
T ss_dssp             EECEEEECCSSSC
T ss_pred             CEEEEEEcCCCCe
Confidence            7899999999985

>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl peptidase IV/CD26, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.80  E-value=3.7e-17  Score=138.11  Aligned_cols=309  Identities=10%  Similarity=0.030  Sum_probs=178.5

Q ss_pred             CCeEEEEecCCceEEEEEecC-----CCCcceEEEEeCCceEEEEEcC---------CCeEEEEeCCCcccceecccCCc
Q psy10867         14 SGAISVWEPKGGTLLMSYKGA-----SVLSPHSMCLLGNDYVLGVEKG---------KPMIQAWPVNSQEKAQLRLICPG   79 (343)
Q Consensus        14 dg~i~iwd~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~~~~~~~---------~~~i~iw~~~~~~~~~~~~~~~~   79 (343)
                      ++.+.+||+.+++....+..+     .. .|.++.|||||+.|+.+.+         ++.+.+||+.+++.. .+..+..
T Consensus        35 ~~~~~~~~~~t~~~~~~~~~~~~~~~~~-~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l~d~~~~~~~-~l~~~~~  112 (470)
T d2bgra1          35 ENNILVFNAEYGNSSVFLENSTFDEFGH-SINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI-TEERIPN  112 (470)
T ss_dssp             SSCEEEEETTTCCEEEEECTTTTTTSSS-CCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC-CSSCCCT
T ss_pred             CCcEEEEECCCCCEEEEEchhhhhhccC-ccceeEECCCCCEEEEEECCcceeeeccCceEEEEECCCCccc-ccccCCc
Confidence            678999999999887665544     35 7999999999988877643         367889999998754 4567888


Q ss_pred             ceEEEEECCCCCEEEEecCCeEEEEEccCCceEEEeccc------------------CCCeEEEEEecCCCEEEEecCCC
Q psy10867         80 RISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSH------------------YQPITIVKWSADSNFIVTGGEDG  141 (343)
Q Consensus        80 ~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~~~------------------~~~v~~~~~~~~~~~l~s~~~dg  141 (343)
                      .+..+.|||||+.+|...++.+++|+..+++..+....+                  .+....+.|+|||++|+....|.
T Consensus       113 ~~~~~~~SPDG~~ia~~~~~~l~~~~~~~g~~~~~t~~~~~~~~~~g~~d~~~~~~~~~~~~~~~wSPDGk~ia~~~~d~  192 (470)
T d2bgra1         113 NTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFND  192 (470)
T ss_dssp             TEEEEEECSSTTCEEEEETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEEC
T ss_pred             cccccccccCcceeeEeecccceEEECCCCceeeeeeccCCCcccccccceeeeeeecCCccccEECCCCCccceeEecC
Confidence            999999999999999988999999999988776544322                  22345688999999999986543


Q ss_pred             e-EEEeecCcc-----c--eeeeeecCCCCCCCCccc------------ccccee-----eeecccccceEEEEeecCCC
Q psy10867        142 T-ICVWQLSRL-----I--CKQTVAFGIPGSSGKGVT------------GLTEPL-----HVKSQHSLPVTHVTLSKLGA  196 (343)
Q Consensus       142 ~-i~iwd~~~~-----~--~~~~~~~~~~~~~~~~~~------------~~~~~~-----~~~~~~~~~v~~~~~~~~~~  196 (343)
                      . +..|.+...     .  .......+..+.......            ......     .........+..+.|.+++ 
T Consensus       193 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~-  271 (470)
T d2bgra1         193 TEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQE-  271 (470)
T ss_dssp             TTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEEGGGCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETT-
T ss_pred             CcCceEEEEeeccCCCCCCeeeeeccccccccCCcceEEEEECCCcceeeeccccccCCccccCCCCceEEEEEEcCCC-
Confidence            3 444443211     0  011111111111000000            000000     0011122345678888887 


Q ss_pred             ceEEEEe-eCC---CeEEE--EecCCCceEEEee-------cCC-----cEEEEEEcCCC--CEEEEEcCCCcEEEEEee
Q psy10867        197 KSRVASV-SHD---RTCKI--FDLCTGEDLLSLI-------LDT-----RLTCVAFDGTE--DNIYMGTSEGVIKSFCLR  256 (343)
Q Consensus       197 ~~~l~~~-~~d---~~i~~--wd~~~~~~~~~~~-------~~~-----~i~~~~~~~~~--~~l~~~~~d~~i~i~d~~  256 (343)
                       .+++.. ...   ..+.+  +|..+++......       ...     ......+.+++  .+++.+..+|..++|...
T Consensus       272 -~~~~~~~~r~~~~~~~~~~~~d~~tg~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~s~~dg~~~ly~~~  350 (470)
T d2bgra1         272 -RISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQ  350 (470)
T ss_dssp             -EEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEE
T ss_pred             -ceeEEEeeccCCceEEEEEEecCCCCcEEEEEEEeeeeeeccceeecccCCCceeeecCCCcEEEEeccCcCceeEEEe
Confidence             444432 222   12333  4445554332211       111     11223444444  345667788877777655


Q ss_pred             cccccccccccCCCCCCccccccCcEEEEEEccCCCEE-EEEeCCC----cEEEEe--cccceeeeec----c-cCCceE
Q psy10867        257 QVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITL-LSSSADE----TLKIWH--TISRQCLRTI----Q-HKGPVL  324 (343)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~s~~~dg----~i~iwd--~~~~~~~~~~----~-~~~~v~  324 (343)
                      .....          ...+..+...|..+ ++++++.+ ++++.++    .-.||.  +..+.....+    . +...+.
T Consensus       351 ~~g~~----------~~~lt~g~~~v~~~-~~~d~~~iyf~a~~~~~~p~~~~ly~v~~~g~~~~~~lt~~~~~~~~~~~  419 (470)
T d2bgra1         351 IDKKD----------CTFITKGTWEVIGI-EALTSDYLYYISNEYKGMPGGRNLYKIQLSDYTKVTCLSCELNPERCQYY  419 (470)
T ss_dssp             TTCSC----------CEESCCSSSCEEEE-EEECSSEEEEEESCGGGCTTCBEEEEEETTCTTCEEESSTTTSTTTBCBE
T ss_pred             ccCCc----------eeeeccCCeeEEEE-EEECCCEEEEEEecCCCCcceEEEEEEECCCCCceeEecccccCCCCCEE
Confidence            32221          22233345556666 44445443 4444332    223444  3433333322    2 677899


Q ss_pred             EEEEccCCCeeee
Q psy10867        325 GAFLGLLPPAIHD  337 (343)
Q Consensus       325 ~~~~sp~~~~l~~  337 (343)
                      .++|||||++++.
T Consensus       420 s~~fSpdgky~~~  432 (470)
T d2bgra1         420 SVSFSKEAKYYQL  432 (470)
T ss_dssp             EEEECTTSSEEEE
T ss_pred             EEEECCCCCEEEE
Confidence            9999999999884

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.71  E-value=1.7e-16  Score=129.66  Aligned_cols=268  Identities=7%  Similarity=-0.137  Sum_probs=167.7

Q ss_pred             cceEEEEeCCce--EEEE-EcCCC--eEEEEeCCCcccceecccCCcceEEEEECCCCCEEEEe-----------cCCeE
Q psy10867         38 SPHSMCLLGNDY--VLGV-EKGKP--MIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVS-----------IETKL  101 (343)
Q Consensus        38 ~v~~~~~~~~~~--~~~~-~~~~~--~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-----------~d~~i  101 (343)
                      ....++..++++  +++. ...++  .+.+||..+++.+.....+...  .++|+|||+.|+..           .++.|
T Consensus        21 ~~~~~a~~~~~~~~~v~~~~~~~g~~~~~~~d~~~~~~~~~~~~~~~~--~~a~spDg~~i~~~~~~~~~~~~g~~d~~v   98 (368)
T d1mdah_          21 SSCDHGPGAISRRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYV   98 (368)
T ss_dssp             CCBCCCCCCCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEE
T ss_pred             CccccccCCCCcceeEEeeccCCCcceEEEEeCCCCcEEEEEeCCCCC--cceECCCCCEEEEEcccCccccccccCCeE
Confidence            344455566664  3332 33334  4667799999887666554443  58999999988863           25679


Q ss_pred             EEEEccCCceEEEecccCC-------CeEEEEEecCCCEEEEec-CCCeEEEeecCccceeeeeecCCCCCCCCcccccc
Q psy10867        102 HMWQISSGRLLATASSHYQ-------PITIVKWSADSNFIVTGG-EDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLT  173 (343)
Q Consensus       102 ~v~~~~~~~~~~~~~~~~~-------~v~~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (343)
                      .+||..+++.+..+..+..       ....++|+|||++++++. .++.+.+||+.+.+....+.               
T Consensus        99 ~v~D~~t~~~~~~i~~p~~~~~~~g~~p~~~a~SpDGk~l~va~~~~~~v~~~d~~~~~~~~~~~---------------  163 (368)
T d1mdah_          99 EVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTK---------------  163 (368)
T ss_dssp             EEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEEEEEEE---------------
T ss_pred             EEEECCCCcEeeeecCCccceecccCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcEeEEee---------------
Confidence            9999999998887754322       234689999999988775 57999999999976554432               


Q ss_pred             ceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-------cCCcEEEEEEcCCCCEEEEEcC
Q psy10867        174 EPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-------LDTRLTCVAFDGTEDNIYMGTS  246 (343)
Q Consensus       174 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-------~~~~i~~~~~~~~~~~l~~~~~  246 (343)
                             .+...    .+.|.++ ..++..+.||.+.++++..........       ....+....+.+++..+...  
T Consensus       164 -------~~~~~----~~~~~~~-~~~v~~~~Dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~--  229 (368)
T d1mdah_         164 -------SASCF----HIHPGAA-ATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAV--  229 (368)
T ss_dssp             -------CSSCC----CCEEEET-TEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEECB--
T ss_pred             -------ccCcc----eEccCCC-ceEEEEcCCCCEEEEEecCCceeeeeeecccccccccceeecccccCcEEEEec--
Confidence                   12111    1222322 466777788888888876554332221       22334566777777665543  


Q ss_pred             CCcEEEEEeecccccccccccCCCCCCcc--ccccCcEEEEEEccCCCEEEEEeCC---------CcEEEEecccceeee
Q psy10867        247 EGVIKSFCLRQVPRTRDHHIQDSTSNPDF--IGHEKQVTSLSCSITGITLLSSSAD---------ETLKIWHTISRQCLR  315 (343)
Q Consensus       247 d~~i~i~d~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~s~~~~~l~s~~~d---------g~i~iwd~~~~~~~~  315 (343)
                      .+.+++++............. .......  .........++++|++..++....+         ..|.+||..+++.+.
T Consensus       230 ~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~a~~~~~~~~~v~~~~~~~~~~~~~~~v~v~D~~t~~~~~  308 (368)
T d1mdah_         230 ASSILQGDIPAAGATMKAAID-GNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSG  308 (368)
T ss_dssp             SSCCEEEECCSSCCEEECCCC-SSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEE
T ss_pred             CCCEEEEeecCCceEEEeecc-cccceeeeeeecCCCceeEEEcCCCCEEEEEecCCCceeecCCceEEEEECCCCcEeE
Confidence            456666666543322111000 0000000  0011223457889998876654322         258999999999999


Q ss_pred             ecccCCceEEEEEccCCCe-eee
Q psy10867        316 TIQHKGPVLGAFLGLLPPA-IHD  337 (343)
Q Consensus       316 ~~~~~~~v~~~~~sp~~~~-l~~  337 (343)
                      ++.....+.+++|+|||+. |++
T Consensus       309 ~~~~~~~~~~~a~spDG~~~ly~  331 (368)
T d1mdah_         309 PISNGHDSDAIIAAQDGASDNYA  331 (368)
T ss_dssp             CCEEEEEECEEEECCSSSCEEEE
T ss_pred             EecCCCceeEEEECCCCCEEEEE
Confidence            9887778999999999984 443

>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl peptidase IV/CD26, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.68  E-value=1.7e-14  Score=121.52  Aligned_cols=294  Identities=11%  Similarity=0.018  Sum_probs=163.5

Q ss_pred             ccceEEEecCCC-----------------CeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeC
Q psy10867          3 LLNEVAFSYDGS-----------------GAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPV   65 (343)
Q Consensus         3 ~v~~~~~s~~~d-----------------g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~   65 (343)
                      .|.++.||||+.                 +.+.|||+.+++ +..+..+.. .+..+.|||||+.+|...+ +.+.+|+.
T Consensus        63 ~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l~d~~~~~-~~~l~~~~~-~~~~~~~SPDG~~ia~~~~-~~l~~~~~  139 (470)
T d2bgra1          63 SINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQ-LITEERIPN-NTQWVTWSPVGHKLAYVWN-NDIYVKIE  139 (470)
T ss_dssp             CCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTE-ECCSSCCCT-TEEEEEECSSTTCEEEEET-TEEEEESS
T ss_pred             ccceeEECCCCCEEEEEECCcceeeeccCceEEEEECCCCc-ccccccCCc-cccccccccCcceeeEeec-ccceEEEC
Confidence            467888888884                 567799998887 456777887 8999999999999988877 79999999


Q ss_pred             CCcccceecccC------------------CcceEEEEECCCCCEEEE-ec-CCeEEEEEc-------------------
Q psy10867         66 NSQEKAQLRLIC------------------PGRISSMQASPDAAYIAV-SI-ETKLHMWQI-------------------  106 (343)
Q Consensus        66 ~~~~~~~~~~~~------------------~~~v~~~~~s~~~~~l~~-~~-d~~i~v~~~-------------------  106 (343)
                      .+++..+....+                  .+....+.|||||+.|+. .. +..+..|.+                   
T Consensus       140 ~~g~~~~~t~~~~~~~~~~g~~d~~~~~~~~~~~~~~~wSPDGk~ia~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~  219 (470)
T d2bgra1         140 PNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYP  219 (470)
T ss_dssp             TTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECC
T ss_pred             CCCceeeeeeccCCCcccccccceeeeeeecCCccccEECCCCCccceeEecCCcCceEEEEeeccCCCCCCeeeeeccc
Confidence            988766443221                  223456889999999996 22 232333322                   


Q ss_pred             ----------------cCCceEEEe-----------cccCCCeEEEEEecCCCEEEEec-C--C-CeEEEee--cCccce
Q psy10867        107 ----------------SSGRLLATA-----------SSHYQPITIVKWSADSNFIVTGG-E--D-GTICVWQ--LSRLIC  153 (343)
Q Consensus       107 ----------------~~~~~~~~~-----------~~~~~~v~~~~~~~~~~~l~s~~-~--d-g~i~iwd--~~~~~~  153 (343)
                                      .++......           ......+..+.|.+++..++... .  + ..+.+++  ..++..
T Consensus       220 ~~g~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~r~~~~~~~~~~~~d~~tg~~  299 (470)
T d2bgra1         220 KAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRW  299 (470)
T ss_dssp             BTTSCCCEEEEEEEEGGGCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEE
T ss_pred             cccccCCcceEEEEECCCcceeeeccccccCCccccCCCCceEEEEEEcCCCceeEEEeeccCCceEEEEEEecCCCCcE
Confidence                            211110000           00112245677777776554422 1  1 1233443  333322


Q ss_pred             eeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEE--ecCCCceEEEeecCCcEEE
Q psy10867        154 KQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIF--DLCTGEDLLSLILDTRLTC  231 (343)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~w--d~~~~~~~~~~~~~~~i~~  231 (343)
                      ........         ...........+...  ...+.+++.+.+++....+|..++|  +...+...........+..
T Consensus       300 ~~~~~~~~---------~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~s~~dg~~~ly~~~~~g~~~~~lt~g~~~v~~  368 (470)
T d2bgra1         300 NCLVARQH---------IEMSTTGWVGRFRPS--EPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTFITKGTWEVIG  368 (470)
T ss_dssp             EECGGGCE---------EEECSSSCSSSSSCC--CCEECTTSSEEEEEEECTTSCEEEEEEETTCSCCEESCCSSSCEEE
T ss_pred             EEEEEEee---------eeeeccceeecccCC--CceeeecCCCcEEEEeccCcCceeEEEeccCCceeeeccCCeeEEE
Confidence            11100000         000000001112222  2234444432556666777765555  5544444333334555666


Q ss_pred             EEEcCCCCEE-EEEcCCC----cEEEEEeecc--cccccccccCCCCCCccccccCcEEEEEEccCCCEEE---EEeCCC
Q psy10867        232 VAFDGTEDNI-YMGTSEG----VIKSFCLRQV--PRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLL---SSSADE  301 (343)
Q Consensus       232 ~~~~~~~~~l-~~~~~d~----~i~i~d~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~---s~~~dg  301 (343)
                      + ++++++.+ +++..++    .-+||.+.-.  .....+       ...+.+|...+.+++|||||++++   ++...-
T Consensus       369 ~-~~~d~~~iyf~a~~~~~~p~~~~ly~v~~~g~~~~~~l-------t~~~~~~~~~~~s~~fSpdgky~~~~~s~~~~P  440 (470)
T d2bgra1         369 I-EALTSDYLYYISNEYKGMPGGRNLYKIQLSDYTKVTCL-------SCELNPERCQYYSVSFSKEAKYYQLRCSGPGLP  440 (470)
T ss_dssp             E-EEECSSEEEEEESCGGGCTTCBEEEEEETTCTTCEEES-------STTTSTTTBCBEEEEECTTSSEEEEEECSBSSC
T ss_pred             E-EEECCCEEEEEEecCCCCcceEEEEEEECCCCCceeEe-------cccccCCCCCEEEEEECCCCCEEEEEecCCCCC
Confidence            6 44445544 4444332    2356655432  211111       123456888899999999999877   333344


Q ss_pred             cEEEEecccceeeeecc
Q psy10867        302 TLKIWHTISRQCLRTIQ  318 (343)
Q Consensus       302 ~i~iwd~~~~~~~~~~~  318 (343)
                      .+.+|+..+++.+..++
T Consensus       441 ~~~l~~~~~g~~v~~le  457 (470)
T d2bgra1         441 LYTLHSSVNDKGLRVLE  457 (470)
T ss_dssp             EEEEEETTTTEEEEEEE
T ss_pred             eEEEEECCCCCEEEEEe
Confidence            68999999999998886

>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme
family: 3-carboxy-cis,cis-mucoante lactonizing enzyme
domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme
species: Neurospora crassa [TaxId: 5141]

Probab=99.60  E-value=2.3e-12  Score=104.30  Aligned_cols=273  Identities=10%  Similarity=0.015  Sum_probs=157.6

Q ss_pred             CCeEEE--EecCCceE--EEEEec-CCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccc-ee-cccCCcceEEEEE
Q psy10867         14 SGAISV--WEPKGGTL--LMSYKG-ASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKA-QL-RLICPGRISSMQA   86 (343)
Q Consensus        14 dg~i~i--wd~~~~~~--~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~-~~-~~~~~~~v~~~~~   86 (343)
                      .+.|.+  +|.++++.  +..... ... .+.-|+|+|+++++.+... +.+..|.+...... .. ..........+.+
T Consensus        13 ~~~i~~~~fd~~~~~l~~~~~~~~~~~~-~~s~la~s~d~~~ly~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~p~~v~~   90 (365)
T d1jofa_          13 PGAIFTVQFDDEKLTCKLIKRTEIPQDE-PISWMTFDHERKNIYGAAM-KKWSSFAVKSPTEIVHEASHPIGGHPRANDA   90 (365)
T ss_dssp             SCEEEEEEEETTTTEEEEEEEEECCTTC-CCSEEEECTTSSEEEEEEB-TEEEEEEEEETTEEEEEEEEECCSSGGGGCT
T ss_pred             CCCEEEEEEcCCCCeEEEeeeeeccCCC-CCCEEEEcCCCCEEEEEeC-CcEEEEEEeCCCCeEEEeeecCCCCcEEEEE
Confidence            455655  45566654  223222 233 5678999999988877766 67888876543222 11 1122234456778


Q ss_pred             CCCCCE--EEEe--cCCeEEEEEccC-C------------ce---EEE-ecccCCCeEEEEEecCCCEEEEecC-CCeEE
Q psy10867         87 SPDAAY--IAVS--IETKLHMWQISS-G------------RL---LAT-ASSHYQPITIVKWSADSNFIVTGGE-DGTIC  144 (343)
Q Consensus        87 s~~~~~--l~~~--~d~~i~v~~~~~-~------------~~---~~~-~~~~~~~v~~~~~~~~~~~l~s~~~-dg~i~  144 (343)
                      +++++.  +++.  ..+.+..+.+.. +            ..   ... -......+.++.|+|++++++++.. ...|.
T Consensus        91 ~~~~~~~~v~~a~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~h~h~v~~sPdG~~l~v~d~g~d~v~  170 (365)
T d1jofa_          91 DTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLW  170 (365)
T ss_dssp             TSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEE
T ss_pred             CCCCCEEEEEEecCCCCEEEEeEccCCCCcceeEeeeecceecCcccCcccCCCCcceEEEECCCCCEEEEeeCCCCEEE
Confidence            888873  3332  234555544321 1            11   011 0112234789999999998887764 45788


Q ss_pred             EeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee
Q psy10867        145 VWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI  224 (343)
Q Consensus       145 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~  224 (343)
                      +|+...........                .. ...........++|+|+++ ...++...+++|.+|++..++......
T Consensus       171 ~~~~~~~g~~~~~~----------------~~-~~~~~g~gPr~i~f~pdg~-~~yv~~e~~~~V~v~~~~~~~~~~~~~  232 (365)
T d1jofa_         171 THRKLASGEVELVG----------------SV-DAPDPGDHPRWVAMHPTGN-YLYALMEAGNRICEYVIDPATHMPVYT  232 (365)
T ss_dssp             EEEECTTSCEEEEE----------------EE-ECSSTTCCEEEEEECTTSS-EEEEEETTTTEEEEEEECTTTCCEEEE
T ss_pred             EEEccCCCceeecc----------------ce-eecCCCCceEEEEECCCCc-eEEEeccCCCEEEEEEecCCCceEEEE
Confidence            88765432221110                11 1122346788999999994 344556678999999987664322111


Q ss_pred             -----c---------------CCcEEEEEEcCCCCEEEEEcC------CCcEEEEEeecccccccccccCCCCCCccccc
Q psy10867        225 -----L---------------DTRLTCVAFDGTEDNIYMGTS------EGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGH  278 (343)
Q Consensus       225 -----~---------------~~~i~~~~~~~~~~~l~~~~~------d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~  278 (343)
                           .               ......+.++|+|++|+++..      .+.|..|++..........     .+......
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~lyvsnr~~~~~~~~~i~~~~~~~~g~~~~~~-----~~~~~~~~  307 (365)
T d1jofa_         233 HHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQL-----FLSPTPTS  307 (365)
T ss_dssp             EEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEE-----EEEECSSC
T ss_pred             eeeeccccccccccccccccccCCccceEECCCCCEEEEEcccCCCccceEEEEEEecCCCceeeEe-----EeeEEEcC
Confidence                 0               113567899999999998743      2237777765432211100     01111122


Q ss_pred             cCcEEEEEEcc-CCCEEEEE-eCCCcEEEEecccc
Q psy10867        279 EKQVTSLSCSI-TGITLLSS-SADETLKIWHTISR  311 (343)
Q Consensus       279 ~~~v~~~~~s~-~~~~l~s~-~~dg~i~iwd~~~~  311 (343)
                      ......++++| +|++|+++ ..++.|.+|++...
T Consensus       308 G~~p~~i~~~p~~G~~l~va~~~s~~v~v~~~~~~  342 (365)
T d1jofa_         308 GGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE  342 (365)
T ss_dssp             CTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred             CCCccEEEecCCCCCEEEEEeCCCCeEEEEEEeCC
Confidence            34567799998 78977655 56789999987543

>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: TolB, C-terminal domain
family: TolB, C-terminal domain
domain: TolB, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=99.59  E-value=2.2e-11  Score=94.25  Aligned_cols=238  Identities=12%  Similarity=0.031  Sum_probs=149.5

Q ss_pred             eEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-ec---CCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEE
Q psy10867         59 MIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SI---ETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFI  134 (343)
Q Consensus        59 ~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~---d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  134 (343)
                      .|.|.|.+....... ..+...+...+|||||+.||- ..   ...+.+.+...+... .+..+.+......|+|+++.+
T Consensus        20 ~l~i~d~dG~~~~~l-~~~~~~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~spdg~~i   97 (269)
T d2hqsa1          20 ELRVSDYDGYNQFVV-HRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGSKL   97 (269)
T ss_dssp             EEEEEETTSCSCEEE-EEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSSEE
T ss_pred             EEEEEcCCCCCcEEE-ecCCCceeeeEECCCCCEEEEEEeeccCcceeeeecccCcee-EEeeeecccccceecCCCCee
Confidence            577778775554443 455677889999999999995 22   235777777666544 444567788899999999988


Q ss_pred             EEecC-CCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCC--eEEE
Q psy10867        135 VTGGE-DGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDR--TCKI  211 (343)
Q Consensus       135 ~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~--~i~~  211 (343)
                      +.... ++...++.......                     ................+++++. ..+++...++  .|.+
T Consensus        98 ~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~i~~  155 (269)
T d2hqsa1          98 AFALSKTGSLNLYVMDLASG---------------------QIRQVTDGRSNNTEPTWFPDSQ-NLAFTSDQAGRPQVYK  155 (269)
T ss_dssp             EEEECTTSSCEEEEEETTTC---------------------CEEECCCCSSCEEEEEECTTSS-EEEEEECTTSSCEEEE
T ss_pred             eEeeecCCccceeecccccc---------------------cceeeeeccccccccccccccc-cceecccccCCceEee
Confidence            76553 33322222222110                     1122222334444556666663 4455554454  4666


Q ss_pred             EecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcC-CCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccC
Q psy10867        212 FDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTS-EGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSIT  290 (343)
Q Consensus       212 wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~  290 (343)
                      .++..+................|+|+++.++..+. .+...+|.........           ....+........||||
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~i~~~~~~~~~~-----------~~~~~~~~~~~p~~SPD  224 (269)
T d2hqsa1         156 VNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV-----------QVLSSTFLDETPSLAPN  224 (269)
T ss_dssp             EETTSSCCEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE-----------EECCCSSSCEEEEECTT
T ss_pred             eecccccceeeecccccccccccccccceeEEEeecCCceeeeEeecccccc-----------eEeecCccccceEECCC
Confidence            67666655544446667888999999998887655 4455555544322211           12234455677899999


Q ss_pred             CCEEEEEeC---CCcEEEEecccceeeeecccCCceEEEEEccC
Q psy10867        291 GITLLSSSA---DETLKIWHTISRQCLRTIQHKGPVLGAFLGLL  331 (343)
Q Consensus       291 ~~~l~s~~~---dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~  331 (343)
                      |+.|+-.+.   ...|+++++..+...+.....+.+...+|||-
T Consensus       225 G~~i~f~s~~~~~~~l~~~~~dg~~~~~lt~~~g~~~~p~WSP~  268 (269)
T d2hqsa1         225 GTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKFPAWSPY  268 (269)
T ss_dssp             SSEEEEEEEETTEEEEEEEETTSCCEEECCCSSSEEEEEEECCC
T ss_pred             CCEEEEEEcCCCCcEEEEEECCCCCEEEEeCCCCcEEeEEeCCC
Confidence            998875443   34788999977665444447778889999983

>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=3.7e-12  Score=106.16  Aligned_cols=324  Identities=10%  Similarity=0.078  Sum_probs=184.1

Q ss_pred             CCCCeEEEEecCCceEEEEEecCC--CCcceEEEEeCCceEEEEEcC---------CCeEEEEeCCCcccceecc--cCC
Q psy10867         12 DGSGAISVWEPKGGTLLMSYKGAS--VLSPHSMCLLGNDYVLGVEKG---------KPMIQAWPVNSQEKAQLRL--ICP   78 (343)
Q Consensus        12 ~~dg~i~iwd~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~---------~~~i~iw~~~~~~~~~~~~--~~~   78 (343)
                      +.+|.|.+||+.+++....+....  ...+....||||++.++...+         .+.+.++|+.++.......  ...
T Consensus        34 ~~~g~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~SpD~~~vl~~~~~~~~~r~s~~~~~~i~d~~~~~~~~l~~~~~~~  113 (465)
T d1xfda1          34 EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSN  113 (465)
T ss_dssp             CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCS
T ss_pred             eCCCcEEEEECCCCCEEEEEcCccccccccceeEECCCCCeEEEEEcccceeEeeccccEEEEEccCCceeeccCccCCc
Confidence            346889999998887644444332  226778889999987666532         3678899999887654322  334


Q ss_pred             cceEEEEECCCCCEEEEecCCeEEEEEccCCceEEEec-ccCCC-----------------eEEEEEecCCCEEEEecC-
Q psy10867         79 GRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATAS-SHYQP-----------------ITIVKWSADSNFIVTGGE-  139 (343)
Q Consensus        79 ~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~-~~~~~-----------------v~~~~~~~~~~~l~s~~~-  139 (343)
                      ..+....|||||+.+|-..++.|.+.+..++..++... +..+.                 -..+-|+|||++|+.... 
T Consensus       114 ~~l~~~~wSPDG~~iafv~~~nl~~~~~~~~~~~~lt~~g~~~~i~nG~~d~vyeee~~~~~~a~~WSPDgk~iaf~~~D  193 (465)
T d1xfda1         114 AKLQYAGWGPKGQQLIFIFENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAIN  193 (465)
T ss_dssp             CCCSBCCBCSSTTCEEEEETTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEE
T ss_pred             cccceeeeccCCceEEEEecceEEEEecCCCceEEEecccCcceeeccccchhhhhhhccccceEEECCCCCeEEEEEec
Confidence            45667899999999998889999999988776655443 22121                 247789999999998753 


Q ss_pred             CCeEEEeecCcc-----ceeeeeecCCCCCCCCcc-------cccccee-----eeecccccceEEEEeecCCCceEEEE
Q psy10867        140 DGTICVWQLSRL-----ICKQTVAFGIPGSSGKGV-------TGLTEPL-----HVKSQHSLPVTHVTLSKLGAKSRVAS  202 (343)
Q Consensus       140 dg~i~iwd~~~~-----~~~~~~~~~~~~~~~~~~-------~~~~~~~-----~~~~~~~~~v~~~~~~~~~~~~~l~~  202 (343)
                      +..|..+.+...     .....+..+.++......       .......     .........+..+.|+|++  ++++.
T Consensus       194 ~s~V~~~~~~~~~~~~~p~~~~~~Yp~~G~~np~~~l~v~d~~~~~~~~~~~~~~~~~~~~~y~~~~~W~~d~--~~~~~  271 (465)
T d1xfda1         194 DSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATST--KVAVT  271 (465)
T ss_dssp             CTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSS--EEEEE
T ss_pred             ccccceeecccccccccceeeeeeccccCCCCCceeEEEEecCCCcEEEEEeccCcCccccceeeeeEEcCCC--eEEEE
Confidence            344555543221     112222222222211100       0000000     0111122346788999988  55554


Q ss_pred             eeC-C---CeEEEEecCCCceEEEeec--CC----cEEEEEEcCCCCEEE---EEcCCC--cEEEEEeeccccccccccc
Q psy10867        203 VSH-D---RTCKIFDLCTGEDLLSLIL--DT----RLTCVAFDGTEDNIY---MGTSEG--VIKSFCLRQVPRTRDHHIQ  267 (343)
Q Consensus       203 ~~~-d---~~i~~wd~~~~~~~~~~~~--~~----~i~~~~~~~~~~~l~---~~~~d~--~i~i~d~~~~~~~~~~~~~  267 (343)
                      ... +   ..+.++|..+++....+..  +.    .-....|+|+|+.++   ....+|  .++..++.......     
T Consensus       272 ~~nR~q~~~~i~~~d~~tg~~~~~~~e~~~~wv~~~~~~p~~~~dg~~~~fi~~se~~g~~~ly~~~~~~~~~~~-----  346 (465)
T d1xfda1         272 WLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNS-----  346 (465)
T ss_dssp             EEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCS-----
T ss_pred             EEccccccceEEEEcCCCCcEEEEEEEcCCceEeccCCceeEccCCCeeEEEEeeeecccCceEEEEeccccccC-----
Confidence            322 2   3588899999887655442  22    123467899998543   222333  44444443221100     


Q ss_pred             CCCCCCccccccCcEEEE-EEccCCCEEE-EEeCCC--cEEEEec--ccceeeeec----ccCCceEEEEEccCCCeeee
Q psy10867        268 DSTSNPDFIGHEKQVTSL-SCSITGITLL-SSSADE--TLKIWHT--ISRQCLRTI----QHKGPVLGAFLGLLPPAIHD  337 (343)
Q Consensus       268 ~~~~~~~~~~~~~~v~~~-~~s~~~~~l~-s~~~dg--~i~iwd~--~~~~~~~~~----~~~~~v~~~~~sp~~~~l~~  337 (343)
                      .+.....+....-.|..+ .|+++++.|. ++..++  .-.+|.+  ..+.....+    ........+.|||++++++.
T Consensus       347 ~~~~~~~LT~G~w~V~~i~~~d~~~~~vyF~a~~~~p~~~hly~v~l~g~~~~~~lt~~~~~~~~~~~~~~S~~~~y~v~  426 (465)
T d1xfda1         347 SNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLL  426 (465)
T ss_dssp             SSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEE
T ss_pred             CCceeEEeccCCceEEEEEEEcCCCCEEEEEEeCCCCCceEEEEEECCCCCcceeeccccCCCCCEEEEEECCCCCEEEE
Confidence            011123333344456665 6888877654 554432  3345544  333222222    24556789999999999986


Q ss_pred             cccCC
Q psy10867        338 YDFTP  342 (343)
Q Consensus       338 ~~~~~  342 (343)
                      ....|
T Consensus       427 ~~s~~  431 (465)
T d1xfda1         427 KCEGP  431 (465)
T ss_dssp             ECCSS
T ss_pred             EeecC
Confidence            55443

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

Probab=99.58  E-value=9.8e-16  Score=124.57  Aligned_cols=261  Identities=12%  Similarity=-0.010  Sum_probs=164.5

Q ss_pred             ecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCce--EEEEEcCCCeE------------------EEEeCCCcc
Q psy10867         10 SYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDY--VLGVEKGKPMI------------------QAWPVNSQE   69 (343)
Q Consensus        10 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~~~~~~~~~i------------------~iw~~~~~~   69 (343)
                      +...++.|.++|+.+++....+.-.....+..++|+|+++  +++.... ..+                  ..+|..+.+
T Consensus        89 ~d~~~~rVavIDl~t~k~~~ii~iP~g~gphgi~~spdg~t~YV~~~~~-~~v~~~~dg~~~~~~~~~~~~~~iD~~t~~  167 (441)
T d1qnia2          89 NDKANTRVARIRLDIMKTDKITHIPNVQAIHGLRLQKVPKTNYVFCNAE-FVIPQPNDGTDFSLDNSYTMFTAIDAETMD  167 (441)
T ss_dssp             EETTTTEEEEEETTTTEEEEEEECTTCCCEEEEEECCSSBCCEEEEEEC-SCEESSCSSSCCCGGGEEEEEEEEETTTCS
T ss_pred             EcCCCCEEEEEECCCCcEeeEEecCCCCCccceEEeccCCEEEEEeccC-CcccccCcccccccccccceEEeecCccce
Confidence            3345789999999999998887754332889999999986  5555554 233                  446777666


Q ss_pred             cceecccCCcceEEEEECCCCCEEEEe-cC-CeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEee
Q psy10867         70 KAQLRLICPGRISSMQASPDAAYIAVS-IE-TKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQ  147 (343)
Q Consensus        70 ~~~~~~~~~~~v~~~~~s~~~~~l~~~-~d-~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd  147 (343)
                      ....... .+....++|+|+|++++++ .+ ..+..++..+.+....+.... .-..+.+.|+|+++..++ ++.+.+++
T Consensus       168 v~~qI~v-~~~p~~v~~spdGk~a~vt~~nse~~~~id~~t~~~~d~i~v~n-~p~~~~~~~dGk~~~v~~-~~v~vvd~  244 (441)
T d1qnia2         168 VAWQVIV-DGNLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFN-VERIAAAVKAGNFKTIGD-SKVPVVDG  244 (441)
T ss_dssp             EEEEEEE-SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSBCEEEEEE-HHHHHHHHHTTCCBCCTT-CCCCEEEC
T ss_pred             eeEEEec-CCCccceEECCCCCEEEEEecCCCceEEEeccCcceEEEEEeCC-ccceEEEecCCCEEEeCC-CCcEEEEc
Confidence            5533322 3457889999999988863 33 234444444443332221111 112344578888776644 57777777


Q ss_pred             cCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceE-------
Q psy10867        148 LSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDL-------  220 (343)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~-------  220 (343)
                      ........                      .+... .....+.++|+|+ .+++++..++++.+||+++.+..       
T Consensus       245 ~~~~~v~~----------------------~IPvg-ksPhGv~vSPDGk-yl~~~~~~~~tvsv~d~~k~~~~~~~~~~~  300 (441)
T d1qnia2         245 RGESEFTR----------------------YIPVP-KNPHGLNTSPDGK-YFIANGKLSPTVSVIAIDKLDDLFEDKIEL  300 (441)
T ss_dssp             SSSCSSEE----------------------EECCB-SSCCCEEECTTSC-EEEEECTTSSBEEEEEGGGHHHHTTTSSCG
T ss_pred             ccCCceEE----------------------EEeCC-CCccCceECCCCC-EEEEeCCcCCcEEEEEeehhhhHhhccCCc
Confidence            66543332                      22223 3356799999994 35567888999999998753311       


Q ss_pred             -----EEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccc----cccCCCCCCccccccCcEEEEEEccCC
Q psy10867        221 -----LSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDH----HIQDSTSNPDFIGHEKQVTSLSCSITG  291 (343)
Q Consensus       221 -----~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~----~~~~~~~~~~~~~~~~~v~~~~~s~~~  291 (343)
                           ......-.....+|+++|..+.+...|.+|..|++........-    .+.....+.-..+|...+.+.+++|||
T Consensus       301 ~~~~~~~~~~glgplh~~fd~~g~~yts~~~ds~v~kw~~~~~~~~~~~~~~~~v~~~~~v~y~~GH~~~~~~~t~~pdG  380 (441)
T d1qnia2         301 RDTIVAEPELGLGPLHTTFDGRGNAYTTLFIDSQVCKWNIADAIKHYNGDRVNYIRQKLDVQYQPGHNHASLTESRDADG  380 (441)
T ss_dssp             GGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCC
T ss_pred             ceEEEeecccccCcccceecCCceEEEcccccceEEEeccchhhhhhccCCCceeEeccccccCCCCCccccccccCCCC
Confidence                 11112223566789999988888899999999998642211000    000000111235788888888899999


Q ss_pred             CEEEEEe
Q psy10867        292 ITLLSSS  298 (343)
Q Consensus       292 ~~l~s~~  298 (343)
                      ++|++++
T Consensus       381 k~l~s~~  387 (441)
T d1qnia2         381 KWLVVLS  387 (441)
T ss_dssp             CEEEEEE
T ss_pred             cEEEecC
Confidence            9999994

>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: All0351-like
domain: Hypothetical protein All0351 homologue
species: Nostoc punctiforme [TaxId: 272131]

Probab=99.56  E-value=6.5e-12  Score=98.95  Aligned_cols=249  Identities=6%  Similarity=-0.017  Sum_probs=162.6

Q ss_pred             CCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEEe-cCCeE
Q psy10867         23 KGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVS-IETKL  101 (343)
Q Consensus        23 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~d~~i  101 (343)
                      ...+.+.++....  .+..++++|||+++++...+++|..|+....  ...+......+.+++|++||+++++. .++.+
T Consensus        16 ~~~~v~~~~p~~~--~~e~iAv~pdG~l~vt~~~~~~I~~i~p~g~--~~~~~~~~~~~~gla~~~dG~l~v~~~~~~~~   91 (302)
T d2p4oa1          16 APAKIITSFPVNT--FLENLASAPDGTIFVTNHEVGEIVSITPDGN--QQIHATVEGKVSGLAFTSNGDLVATGWNADSI   91 (302)
T ss_dssp             CCEEEEEEECTTC--CEEEEEECTTSCEEEEETTTTEEEEECTTCC--EEEEEECSSEEEEEEECTTSCEEEEEECTTSC
T ss_pred             CcccEEEECCCCC--CcCCEEECCCCCEEEEeCCCCEEEEEeCCCC--EEEEEcCCCCcceEEEcCCCCeEEEecCCceE
Confidence            3445566665444  6789999999999999988899988886643  23344566789999999999988874 55677


Q ss_pred             EEEEccCC--ceEEEe-cccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeee
Q psy10867        102 HMWQISSG--RLLATA-SSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHV  178 (343)
Q Consensus       102 ~v~~~~~~--~~~~~~-~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (343)
                      ..++....  ...... .........+.+.++++++++-+.++.+..++..............            .....
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~n~i~~~~~g~~~v~~~~~~~i~~~~~~~~~~~~~~~~~~------------~~~~~  159 (302)
T d2p4oa1          92 PVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPM------------LARSN  159 (302)
T ss_dssp             EEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGG------------GSCSS
T ss_pred             EEEEecccccceeeccccCCccccceeEEccCCCEEeeccccccceeeeccCCcceeEecCCc------------cceee
Confidence            77776543  222211 1234567899999999999988888999988887754322111000            00000


Q ss_pred             ecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceE---EEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEe
Q psy10867        179 KSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDL---LSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCL  255 (343)
Q Consensus       179 ~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~---~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~  255 (343)
                      ..........+.+..+   .++++.+..+.|..++.......   ..+........++++++|+++++...++.|..++.
T Consensus       160 ~~~~~~~~ngi~~~~~---~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~pdgia~d~dG~l~va~~~~~~V~~i~p  236 (302)
T d2p4oa1         160 SESVFPAANGLKRFGN---FLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIAP  236 (302)
T ss_dssp             TTCCSCSEEEEEEETT---EEEEEETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECBTTCCEEEECT
T ss_pred             ccCcccccccccccCC---ceeeecCCCCeEEeccccccccccccccccCCCCCcceEECCCCCEEEEEcCCCcEEEECC
Confidence            1112234456666543   57777788899998887654332   22223445677999999998888778898888865


Q ss_pred             ecccccccccccCCCCCCccccccCcEEEEEE---ccCCCEEEEEeCC
Q psy10867        256 RQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSC---SITGITLLSSSAD  300 (343)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~---s~~~~~l~s~~~d  300 (343)
                      ......          +......-..+++++|   ++|++.|+.++..
T Consensus       237 ~G~~~~----------~~~~~~~~~~pt~vafg~~~~D~~~Lyvtt~~  274 (302)
T d2p4oa1         237 DRSTTI----------IAQAEQGVIGSTAVAFGQTEGDCTAIYVVTNG  274 (302)
T ss_dssp             TCCEEE----------EECGGGTCTTEEEEEECCSTTTTTEEEEEECT
T ss_pred             CCCEEE----------EEecCCCCCCceEEEEcCCCCCCCEEEEECCC
Confidence            432110          1122223356889999   6788877766544

>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: TolB, C-terminal domain
family: TolB, C-terminal domain
domain: TolB, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=99.53  E-value=6.4e-11  Score=91.53  Aligned_cols=244  Identities=14%  Similarity=0.081  Sum_probs=147.1

Q ss_pred             ceEEEecCCCC-----eEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCC---CeEEEEeCCCcccceeccc
Q psy10867          5 NEVAFSYDGSG-----AISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGK---PMIQAWPVNSQEKAQLRLI   76 (343)
Q Consensus         5 ~~~~~s~~~dg-----~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~---~~i~iw~~~~~~~~~~~~~   76 (343)
                      +.++|....++     .|.|-|...+.......+ .. .+.+.+|||||+.||.....   ..+.+.+..++... .+..
T Consensus         4 ~~iay~~~~~~~~~~~~l~i~d~dG~~~~~l~~~-~~-~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~~~~~-~~~~   80 (269)
T d2hqsa1           4 TRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRS-PQ-PLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVAS   80 (269)
T ss_dssp             CEEEEEEECSSSSCCEEEEEEETTSCSCEEEEEE-SS-CEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEEC
T ss_pred             CeEEEEEEeCCCCceEEEEEEcCCCCCcEEEecC-CC-ceeeeEECCCCCEEEEEEeeccCcceeeeecccCcee-EEee
Confidence            35666555543     678888754444444444 44 78899999999887765332   24666676665543 3446


Q ss_pred             CCcceEEEEECCCCCEEEEe--cCC--eEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEE-ecCCCe--EEEeecC
Q psy10867         77 CPGRISSMQASPDAAYIAVS--IET--KLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVT-GGEDGT--ICVWQLS  149 (343)
Q Consensus        77 ~~~~v~~~~~s~~~~~l~~~--~d~--~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s-~~~dg~--i~iwd~~  149 (343)
                      +........|+|+|+.++..  ..+  .+..+......... ............++++++.++. ...+|.  |.+.++.
T Consensus        81 ~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~  159 (269)
T d2hqsa1          81 FPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQ-VTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNIN  159 (269)
T ss_dssp             CSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEE-CCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETT
T ss_pred             eecccccceecCCCCeeeEeeecCCccceeeccccccccee-eeeccccccccccccccccceecccccCCceEeeeecc
Confidence            67788899999999988862  233  34444433333333 3334444556677777665444 444554  5555555


Q ss_pred             ccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeC-CCe--EEEEecCCCceEEEeecC
Q psy10867        150 RLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSH-DRT--CKIFDLCTGEDLLSLILD  226 (343)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~-d~~--i~~wd~~~~~~~~~~~~~  226 (343)
                      ..                       ................|+|++  ..++..+. .+.  +.+.+...+. .......
T Consensus       160 ~~-----------------------~~~~~~~~~~~~~~~~~spdg--~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~  213 (269)
T d2hqsa1         160 GG-----------------------APQRITWEGSQNQDADVSSDG--KFMVMVSSNGGQQHIAKQDLATGG-VQVLSST  213 (269)
T ss_dssp             SS-----------------------CCEECCCSSSEEEEEEECTTS--SEEEEEEECSSCEEEEEEETTTCC-EEECCCS
T ss_pred             cc-----------------------cceeeeccccccccccccccc--ceeEEEeecCCceeeeEeeccccc-ceEeecC
Confidence            43                       222333455667788999999  55555444 444  4444544443 3334455


Q ss_pred             CcEEEEEEcCCCCEEEEEcC---CCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccC
Q psy10867        227 TRLTCVAFDGTEDNIYMGTS---EGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSIT  290 (343)
Q Consensus       227 ~~i~~~~~~~~~~~l~~~~~---d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~  290 (343)
                      .......|+|||+.|+..+.   ...|+++++.....            ..+....+.+...+|||-
T Consensus       214 ~~~~~p~~SPDG~~i~f~s~~~~~~~l~~~~~dg~~~------------~~lt~~~g~~~~p~WSP~  268 (269)
T d2hqsa1         214 FLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFK------------ARLPATDGQVKFPAWSPY  268 (269)
T ss_dssp             SSCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCE------------EECCCSSSEEEEEEECCC
T ss_pred             ccccceEECCCCCEEEEEEcCCCCcEEEEEECCCCCE------------EEEeCCCCcEEeEEeCCC
Confidence            56778899999999876543   34677888765432            223344567788899983

>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: All0351-like
domain: Hypothetical protein All0351 homologue
species: Nostoc punctiforme [TaxId: 272131]

Probab=99.52  E-value=4.8e-11  Score=93.90  Aligned_cols=225  Identities=8%  Similarity=0.020  Sum_probs=153.7

Q ss_pred             ceEEEEECCCCCEEEEe-cCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeee
Q psy10867         80 RISSMQASPDAAYIAVS-IETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVA  158 (343)
Q Consensus        80 ~v~~~~~s~~~~~l~~~-~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~  158 (343)
                      .+..++++|||+++++. .+++|..++.. ++ ...+......+.+++|.++|+++++...++.+..++.........  
T Consensus        29 ~~e~iAv~pdG~l~vt~~~~~~I~~i~p~-g~-~~~~~~~~~~~~gla~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~--  104 (302)
T d2p4oa1          29 FLENLASAPDGTIFVTNHEVGEIVSITPD-GN-QQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVE--  104 (302)
T ss_dssp             CEEEEEECTTSCEEEEETTTTEEEEECTT-CC-EEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEE--
T ss_pred             CcCCEEECCCCCEEEEeCCCCEEEEEeCC-CC-EEEEEcCCCCcceEEEcCCCCeEEEecCCceEEEEEeccccccee--
Confidence            57889999999999885 57888888854 44 334445567799999999999999888888888887755321110  


Q ss_pred             cCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeec-----------CC
Q psy10867        159 FGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLIL-----------DT  227 (343)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~-----------~~  227 (343)
                                      .+ ...........+++.+++  .++++.+.++.+..+|...+........           ..
T Consensus       105 ----------------~~-~~~~~~~~~n~i~~~~~g--~~~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (302)
T d2p4oa1         105 ----------------TL-LTLPDAIFLNGITPLSDT--QYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFP  165 (302)
T ss_dssp             ----------------EE-EECTTCSCEEEEEESSSS--EEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSC
T ss_pred             ----------------ec-cccCCccccceeEEccCC--CEEeeccccccceeeeccCCcceeEecCCccceeeccCccc
Confidence                            11 112234567899999998  8888888899999999877654332221           12


Q ss_pred             cEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEe
Q psy10867        228 RLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWH  307 (343)
Q Consensus       228 ~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd  307 (343)
                      ....+.++. +..+++.+..+.|+.++..........         ...........++++++|+++++...++.|..++
T Consensus       166 ~~ngi~~~~-~~l~~~~~~~~~i~~~~~~~~~~~~~~---------~~~~~~~~pdgia~d~dG~l~va~~~~~~V~~i~  235 (302)
T d2p4oa1         166 AANGLKRFG-NFLYVSNTEKMLLLRIPVDSTDKPGEP---------EIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIA  235 (302)
T ss_dssp             SEEEEEEET-TEEEEEETTTTEEEEEEBCTTSCBCCC---------EEEEESCCCSSEEEBTTCCEEEECBTTCCEEEEC
T ss_pred             ccccccccC-CceeeecCCCCeEEecccccccccccc---------ccccCCCCCcceEECCCCCEEEEEcCCCcEEEEC
Confidence            355666653 334555677888888887654332211         1112233456799999999888888899999998


Q ss_pred             ccccee--eeecc-cCCceEEEEE---ccCCCeeeec
Q psy10867        308 TISRQC--LRTIQ-HKGPVLGAFL---GLLPPAIHDY  338 (343)
Q Consensus       308 ~~~~~~--~~~~~-~~~~v~~~~~---sp~~~~l~~~  338 (343)
                      .. ++.  +.... .....++++|   ++|++.|+..
T Consensus       236 p~-G~~~~~~~~~~~~~~pt~vafg~~~~D~~~Lyvt  271 (302)
T d2p4oa1         236 PD-RSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVV  271 (302)
T ss_dssp             TT-CCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEE
T ss_pred             CC-CCEEEEEecCCCCCCceEEEEcCCCCCCCEEEEE
Confidence            65 443  33333 4456899999   7888888764

>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Serine/threonine-protein kinase PknD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.50  E-value=5.3e-11  Score=91.43  Aligned_cols=235  Identities=6%  Similarity=-0.050  Sum_probs=150.6

Q ss_pred             cceEEEEeCCceEEEEE-cCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEEecCC-eEEEEEccCCceEEEe
Q psy10867         38 SPHSMCLLGNDYVLGVE-KGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIET-KLHMWQISSGRLLATA  115 (343)
Q Consensus        38 ~v~~~~~~~~~~~~~~~-~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~d~-~i~v~~~~~~~~~~~~  115 (343)
                      .+..+++.++|.+.++. ...+.+..++...................++++++++++++...+ .+++++-.++..+...
T Consensus        15 ~P~~vavd~dG~i~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~gvav~~~g~i~v~d~~~~~i~~~~~~~~~~~~~~   94 (260)
T d1rwia_          15 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVLPF   94 (260)
T ss_dssp             CEEEEEECTTCCEEEEECSSSCEEEEEC----CEEECCCCSCCSCCCEEECTTCCEEEEETTTEEEEECTTCSCCEECCC
T ss_pred             CCCEEEEcCCCCEEEEEcCCCCEEEEEcCCCceEEEeccCCccCceEEEEcCCCCEEEeeeeeceeeeeeeccceeeeee
Confidence            57899999999866654 444677777665544333222323446788999999988885444 5655554444444333


Q ss_pred             cccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCC
Q psy10867        116 SSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLG  195 (343)
Q Consensus       116 ~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  195 (343)
                      . ......++++.++++++++-..+..+..++........                     . ..........+++++++
T Consensus        95 ~-~~~~p~~iavd~~g~i~v~d~~~~~~~~~~~~~~~~~~---------------------~-~~~~~~~p~~i~~~~~g  151 (260)
T d1rwia_          95 D-GLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTV---------------------L-PFTGLNDPDGVAVDNSG  151 (260)
T ss_dssp             C-SCCSEEEEEECTTCCEEEEEGGGTEEEEECTTCSSCEE---------------------C-CCCSCCSCCEEEECTTC
T ss_pred             e-eeeecccccccccceeEeeccccccccccccccceeee---------------------e-eecccCCcceeeecCCC
Confidence            2 23557899999999988877667777777765532111                     0 11122345689999988


Q ss_pred             CceEEEEeeCCCeEEEEecCCCceEEEe-ecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCc
Q psy10867        196 AKSRVASVSHDRTCKIFDLCTGEDLLSL-ILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPD  274 (343)
Q Consensus       196 ~~~~l~~~~~d~~i~~wd~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~  274 (343)
                        +++++...++.|..+|.+........ ..-.....++++++|+++++....+.|..++........          . 
T Consensus       152 --~~~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~p~gi~~d~~g~l~vsd~~~~~i~~~~~~~~~~~~----------~-  218 (260)
T d1rwia_         152 --NVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTV----------L-  218 (260)
T ss_dssp             --CEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTTEEEEECTTCSCCEE----------C-
T ss_pred             --CEeeeccccccccccccccceeeeeeccccCCCccceeeeeeeeeeeecCCCEEEEEeCCCCeEEE----------E-
Confidence              67888788889999997654433221 234557899999999988888888888888654321110          0 


Q ss_pred             cccccCcEEEEEEccCCCEEEEEeCCCcEEEEec
Q psy10867        275 FIGHEKQVTSLSCSITGITLLSSSADETLKIWHT  308 (343)
Q Consensus       275 ~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~  308 (343)
                      ....-.....|+++++|+++++-..++.|+..+.
T Consensus       219 ~~~~~~~P~~i~~d~~g~l~vad~~~~rI~~i~~  252 (260)
T d1rwia_         219 PFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTS  252 (260)
T ss_dssp             CCCSCCCEEEEEECTTCCEEEEEGGGTEEEEECC
T ss_pred             ccCCCCCeEEEEEeCCCCEEEEECCCCEEEEEeC
Confidence            0112245789999999988777666776665553

>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme
family: 3-carboxy-cis,cis-mucoante lactonizing enzyme
domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme
species: Neurospora crassa [TaxId: 5141]

Probab=99.50  E-value=2.2e-11  Score=98.38  Aligned_cols=255  Identities=9%  Similarity=0.008  Sum_probs=144.3

Q ss_pred             CCcceEEEEECCCCCEEEEecCCeEEEEEccCCceEEEec--ccCCCeEEEEEecCCCEE--EEec-CCCeEEEeecCcc
Q psy10867         77 CPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATAS--SHYQPITIVKWSADSNFI--VTGG-EDGTICVWQLSRL  151 (343)
Q Consensus        77 ~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l--~s~~-~dg~i~iwd~~~~  151 (343)
                      ....+..|+|+|++++|.+...+.+..|.+.....+....  ........+.++++++.+  ++.. ..+.|..+.+...
T Consensus        38 ~~~~~s~la~s~d~~~ly~~~~~~~~~~~i~~~~~~~~~~~~~~~~~p~~v~~~~~~~~~~v~~a~~~~~~v~~~~~~~~  117 (365)
T d1jofa_          38 QDEPISWMTFDHERKNIYGAAMKKWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKF  117 (365)
T ss_dssp             TTCCCSEEEECTTSSEEEEEEBTEEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSS
T ss_pred             CCCCCCEEEEcCCCCEEEEEeCCcEEEEEEeCCCCeEEEeeecCCCCcEEEEECCCCCEEEEEEecCCCCEEEEeEccCC
Confidence            4455678999999999988777788888776543222221  122334567788888743  3332 2455665544322


Q ss_pred             cee-eeeecCCCCCCCCcccccccee-eeecccccceEEEEeecCCCceEEEEee-CCCeEEEEecCCCceEE---Eee-
Q psy10867        152 ICK-QTVAFGIPGSSGKGVTGLTEPL-HVKSQHSLPVTHVTLSKLGAKSRVASVS-HDRTCKIFDLCTGEDLL---SLI-  224 (343)
Q Consensus       152 ~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~l~~~~-~d~~i~~wd~~~~~~~~---~~~-  224 (343)
                      ... .........       ...... .........+.++.|+|++  ++++++. ....|.+|+......+.   ... 
T Consensus       118 ~~~~~~~~~~~~~-------~~~~~~~~~~~q~~~h~h~v~~sPdG--~~l~v~d~g~d~v~~~~~~~~g~~~~~~~~~~  188 (365)
T d1jofa_         118 AGYGNVFSVSETG-------KLEKNVQNYEYQENTGIHGMVFDPTE--TYLYSADLTANKLWTHRKLASGEVELVGSVDA  188 (365)
T ss_dssp             CCEEEEEEECTTC-------CEEEEEEEEECCTTCCEEEEEECTTS--SEEEEEETTTTEEEEEEECTTSCEEEEEEEEC
T ss_pred             CCcceeEeeeecc-------eecCcccCcccCCCCcceEEEECCCC--CEEEEeeCCCCEEEEEEccCCCceeeccceee
Confidence            111 111000000       000011 1112233457899999999  5555554 45688888765433222   111 


Q ss_pred             --cCCcEEEEEEcCCCCEEEEEc-CCCcEEEEEeeccccccccccc------C--CCCCCccccccCcEEEEEEccCCCE
Q psy10867        225 --LDTRLTCVAFDGTEDNIYMGT-SEGVIKSFCLRQVPRTRDHHIQ------D--STSNPDFIGHEKQVTSLSCSITGIT  293 (343)
Q Consensus       225 --~~~~i~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~------~--~~~~~~~~~~~~~v~~~~~s~~~~~  293 (343)
                        .......++|+|+++++++.. .+++|.+|++............      .  .........+......+.++|||++
T Consensus       189 ~~~g~gPr~i~f~pdg~~~yv~~e~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~  268 (365)
T d1jofa_         189 PDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKY  268 (365)
T ss_dssp             SSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSE
T ss_pred             cCCCCceEEEEECCCCceEEEeccCCCEEEEEEecCCCceEEEEeeeeccccccccccccccccccCCccceEECCCCCE
Confidence              345789999999999887654 5889999998764332111100      0  0001111223345678899999999


Q ss_pred             EEEEeC-C-----CcEEEEecccceeeee---c---c-cCCceEEEEEcc-CCCeeeeccc
Q psy10867        294 LLSSSA-D-----ETLKIWHTISRQCLRT---I---Q-HKGPVLGAFLGL-LPPAIHDYDF  340 (343)
Q Consensus       294 l~s~~~-d-----g~i~iwd~~~~~~~~~---~---~-~~~~v~~~~~sp-~~~~l~~~~~  340 (343)
                      |+++.. +     +.|..|++.....+..   +   . ......+++++| +|++|++++.
T Consensus       269 lyvsnr~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~G~~p~~i~~~p~~G~~l~va~~  329 (365)
T d1jofa_         269 MFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDD  329 (365)
T ss_dssp             EEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECS
T ss_pred             EEEEcccCCCccceEEEEEEecCCCceeeEeEeeEEEcCCCCccEEEecCCCCCEEEEEeC
Confidence            887642 2     2377777654222211   1   1 345678899998 8999988764

>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP)
species: Squid (Loligo vulgaris) [TaxId: 6622]

Probab=99.46  E-value=3.9e-10  Score=88.87  Aligned_cols=236  Identities=9%  Similarity=0.024  Sum_probs=149.1

Q ss_pred             cceEEEEeCCceEEEEEcC-------CCeEEEEeCCCcccceeccc----CCcceEEEEECCCCCEEEE-ecCCeEEEEE
Q psy10867         38 SPHSMCLLGNDYVLGVEKG-------KPMIQAWPVNSQEKAQLRLI----CPGRISSMQASPDAAYIAV-SIETKLHMWQ  105 (343)
Q Consensus        38 ~v~~~~~~~~~~~~~~~~~-------~~~i~iw~~~~~~~~~~~~~----~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~  105 (343)
                      ....++|.|+|.+.++...       +|.|..||..++........    ..+.-..++|.+++..+++ ...+.|..++
T Consensus        19 g~EGpa~d~dG~ly~~~~~~~~~~~~~g~I~r~d~~~~~~~~~~~~~~~~~~g~P~Gl~~~~dg~~l~vad~~~~i~~~~   98 (314)
T d1pjxa_          19 GAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLLVVQ   98 (314)
T ss_dssp             TCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTTEEEEEE
T ss_pred             CCeEeEEeCCCCEEEEECccccccccCCEEEEEECCCCcEEEEECCccccCCCcceeEEEeCCCCEEEEEECCCeEEEEe
Confidence            4567899999988877543       35788899887765433221    1223578999999986655 5556788888


Q ss_pred             ccCCceEEEecc-cCC----CeEEEEEecCCCEEEEecC---------------CCeEEEeecCccceeeeeecCCCCCC
Q psy10867        106 ISSGRLLATASS-HYQ----PITIVKWSADSNFIVTGGE---------------DGTICVWQLSRLICKQTVAFGIPGSS  165 (343)
Q Consensus       106 ~~~~~~~~~~~~-~~~----~v~~~~~~~~~~~l~s~~~---------------dg~i~iwd~~~~~~~~~~~~~~~~~~  165 (343)
                      .+.+. ...+.. ..+    ....+++.++|++.++-..               .|.|..++...               
T Consensus        99 ~~g~~-~~~~~~~~~g~~~~~pndl~~d~~G~lyvtd~~~~~~~~~~~~~~~~~~G~v~~~~~dg---------------  162 (314)
T d1pjxa_          99 TDGTF-EEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDG---------------  162 (314)
T ss_dssp             TTSCE-EECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTS---------------
T ss_pred             CCCcE-EEEEeccccccccCCCcEEEECCCCCEEEecCccCcccccccceeccCCceEEEEeecC---------------
Confidence            76543 222221 111    3577999999987776422               22333333322               


Q ss_pred             CCccccccceeeeecccccceEEEEeecCCCc---eEEEEeeCCCeEEEEecCCCceEEE------ee--cCCcEEEEEE
Q psy10867        166 GKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAK---SRVASVSHDRTCKIFDLCTGEDLLS------LI--LDTRLTCVAF  234 (343)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~---~~l~~~~~d~~i~~wd~~~~~~~~~------~~--~~~~i~~~~~  234 (343)
                               ....+...-...+.++|+|+++.   .++++-+..+.|..||+.....+..      +.  .......+++
T Consensus       163 ---------~~~~~~~~~~~pNGi~~~~d~d~~~~~lyv~d~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~pdGiav  233 (314)
T d1pjxa_         163 ---------QMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDF  233 (314)
T ss_dssp             ---------CEEEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEE
T ss_pred             ---------ceeEeeCCcceeeeeEECCCCCcceeEEEEEeecccceEEeeccCccccceeeEEEEccccccccceeeEE
Confidence                     11111222334578899987631   2455567788999998764433221      11  1224678999


Q ss_pred             cCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCC-EEEEEeCCCcEEEEecc
Q psy10867        235 DGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGI-TLLSSSADETLKIWHTI  309 (343)
Q Consensus       235 ~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~s~~~dg~i~iwd~~  309 (343)
                      .++|+..++....+.|.+||......           ...+......+++++|.||++ ++++.+.+|.|...++.
T Consensus       234 D~~GnlyVa~~~~g~I~~~dp~~g~~-----------~~~i~~p~~~~t~~afg~d~~~lyVt~~~~g~i~~~~~~  298 (314)
T d1pjxa_         234 DEDNNLLVANWGSSHIEVFGPDGGQP-----------KMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQ  298 (314)
T ss_dssp             BTTCCEEEEEETTTEEEEECTTCBSC-----------SEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECS
T ss_pred             ecCCcEEEEEcCCCEEEEEeCCCCEE-----------EEEEECCCCCEEEEEEeCCCCEEEEEECCCCcEEEEECC
Confidence            99999888877889999998765332           222333456789999999987 44666777888887764

>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Serine/threonine-protein kinase PknD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.46  E-value=6.3e-11  Score=90.99  Aligned_cols=221  Identities=6%  Similarity=-0.095  Sum_probs=144.4

Q ss_pred             ceEEEEECCCCCEEEE--ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeee
Q psy10867         80 RISSMQASPDAAYIAV--SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTV  157 (343)
Q Consensus        80 ~v~~~~~s~~~~~l~~--~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~  157 (343)
                      ....+++.++|.+.++  +..+.+..++............-......++++++++.+++....+.+++++-.+.....  
T Consensus        15 ~P~~vavd~dG~i~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~gvav~~~g~i~v~d~~~~~i~~~~~~~~~~~~--   92 (260)
T d1rwia_          15 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVL--   92 (260)
T ss_dssp             CEEEEEECTTCCEEEEECSSSCEEEEEC----CEEECCCCSCCSCCCEEECTTCCEEEEETTTEEEEECTTCSCCEEC--
T ss_pred             CCCEEEEcCCCCEEEEEcCCCCEEEEEcCCCceEEEeccCCccCceEEEEcCCCCEEEeeeeeceeeeeeeccceeee--
Confidence            4579999999997665  345677777655443322222222345788999999988887777777777655432111  


Q ss_pred             ecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEe-ecCCcEEEEEEcC
Q psy10867        158 AFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSL-ILDTRLTCVAFDG  236 (343)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~-~~~~~i~~~~~~~  236 (343)
                                           ..........+++.+++  +++++-.....+..++.......... ........+++++
T Consensus        93 ---------------------~~~~~~~p~~iavd~~g--~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~~~  149 (260)
T d1rwia_          93 ---------------------PFDGLNYPEGLAVDTQG--AVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDN  149 (260)
T ss_dssp             ---------------------CCCSCCSEEEEEECTTC--CEEEEEGGGTEEEEECTTCSSCEECCCCSCCSCCEEEECT
T ss_pred             ---------------------eeeeeeecccccccccc--eeEeeccccccccccccccceeeeeeecccCCcceeeecC
Confidence                                 11123456889999988  67777667777888876544332211 1234567899999


Q ss_pred             CCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeee
Q psy10867        237 TEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRT  316 (343)
Q Consensus       237 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~  316 (343)
                      +++.+++...++.|..+|........           .....-.....++++++|+++++....+.|..++..... ...
T Consensus       150 ~g~~~v~~~~~~~i~~~d~~~~~~~~-----------~~~~~~~~p~gi~~d~~g~l~vsd~~~~~i~~~~~~~~~-~~~  217 (260)
T d1rwia_         150 SGNVYVTDTDNNRVVKLEAESNNQVV-----------LPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTT-STV  217 (260)
T ss_dssp             TCCEEEEEGGGTEEEEECTTTCCEEE-----------CCCSSCCSEEEEEECTTCCEEEEETTTTEEEEECTTCSC-CEE
T ss_pred             CCCEeeeccccccccccccccceeee-----------eeccccCCCccceeeeeeeeeeeecCCCEEEEEeCCCCe-EEE
Confidence            99988888888899999876532211           011233456889999999988888888888888765432 233


Q ss_pred             cc--cCCceEEEEEccCCCeeee
Q psy10867        317 IQ--HKGPVLGAFLGLLPPAIHD  337 (343)
Q Consensus       317 ~~--~~~~v~~~~~sp~~~~l~~  337 (343)
                      +.  .......++++++|..+++
T Consensus       218 ~~~~~~~~P~~i~~d~~g~l~va  240 (260)
T d1rwia_         218 LPFTGLNTPLAVAVDSDRTVYVA  240 (260)
T ss_dssp             CCCCSCCCEEEEEECTTCCEEEE
T ss_pred             EccCCCCCeEEEEEeCCCCEEEE
Confidence            32  3356789999999976655

>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Brain tumor cg10719-pa
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.46  E-value=3.9e-10  Score=87.45  Aligned_cols=237  Identities=11%  Similarity=0.053  Sum_probs=161.1

Q ss_pred             cceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecc------cCCcceEEEEECCC-CCEEEE--ecCCeEEEEEccC
Q psy10867         38 SPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRL------ICPGRISSMQASPD-AAYIAV--SIETKLHMWQISS  108 (343)
Q Consensus        38 ~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~------~~~~~v~~~~~s~~-~~~l~~--~~d~~i~v~~~~~  108 (343)
                      .+..++++|++.++++-..++.|++||.+ ++.+..+.      ........+++.++ +.++++  +.++.|..++. .
T Consensus        24 ~P~gvavd~dg~i~VaD~~n~rI~v~d~~-G~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~  101 (279)
T d1q7fa_          24 EPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQ-Y  101 (279)
T ss_dssp             CEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECT-T
T ss_pred             CccEEEEcCCCCEEEEECCCCEEEEEeCC-CCEEEEecccCCCcccccccccccccccccccceeccCCccccccccc-c
Confidence            57899999999988887777899999976 44333221      11123445565544 444444  34568888885 5


Q ss_pred             CceEEEec-ccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceE
Q psy10867        109 GRLLATAS-SHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVT  187 (343)
Q Consensus       109 ~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  187 (343)
                      +.....+. ........+++.++++++++....+.+.+++.... ....+                    ....+.....
T Consensus       102 g~~~~~~~~~~~~~p~~~avd~~G~i~v~~~~~~~~~~~~~~g~-~~~~~--------------------g~~~~~~~~~  160 (279)
T d1q7fa_         102 GQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGN-VLHKF--------------------GCSKHLEFPN  160 (279)
T ss_dssp             SCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSC-EEEEE--------------------ECTTTCSSEE
T ss_pred             ccceeecCCCcccccceeccccCCcEEEEeeccceeeEeccCCc-eeecc--------------------cccccccccc
Confidence            66666553 34456788999999998888888888888887543 11111                    1134556778


Q ss_pred             EEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeec---CCcEEEEEEcCCCCEEEEEcC-CCcEEEEEeeccccccc
Q psy10867        188 HVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLIL---DTRLTCVAFDGTEDNIYMGTS-EGVIKSFCLRQVPRTRD  263 (343)
Q Consensus       188 ~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~---~~~i~~~~~~~~~~~l~~~~~-d~~i~i~d~~~~~~~~~  263 (343)
                      .+++.+++  .++++....+.|++||. +++.+.++..   ......++++++|+.+++-.. ++.|.+|+... +.   
T Consensus       161 ~i~~d~~g--~i~v~d~~~~~V~~~d~-~G~~~~~~g~~g~~~~P~giavD~~G~i~Vad~~~~~~v~~f~~~G-~~---  233 (279)
T d1q7fa_         161 GVVVNDKQ--EIFISDNRAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDG-QL---  233 (279)
T ss_dssp             EEEECSSS--EEEEEEGGGTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTS-CE---
T ss_pred             eeeeccce--eEEeeeccccceeeeec-CCceeeeecccccccCCcccccccCCeEEEEECCCCcEEEEECCCC-CE---
Confidence            89999988  78888888999999995 6777777753   334789999999997766543 45788887432 11   


Q ss_pred             ccccCCCCCCcc--ccccCcEEEEEEccCCCEEEEEeCCCcEEEEeccccee
Q psy10867        264 HHIQDSTSNPDF--IGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQC  313 (343)
Q Consensus       264 ~~~~~~~~~~~~--~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~  313 (343)
                              +..+  .........+++.|+|++++ ++.+..|++|......+
T Consensus       234 --------~~~~~~~~~~~~p~~vav~~dG~l~V-~~~n~~v~~fr~~~~~~  276 (279)
T d1q7fa_         234 --------ISALESKVKHAQCFDVALMDDGSVVL-ASKDYRLYIYRYVQLAP  276 (279)
T ss_dssp             --------EEEEEESSCCSCEEEEEEETTTEEEE-EETTTEEEEEECSCCCC
T ss_pred             --------EEEEeCCCCCCCEeEEEEeCCCcEEE-EeCCCeEEEEEeeeecC
Confidence                    1111  11223578899999997655 45788999999876543

>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Lactonase Drp35
species: Staphylococcus aureus [TaxId: 1280]

Probab=99.41  E-value=1.7e-09  Score=85.48  Aligned_cols=232  Identities=9%  Similarity=-0.030  Sum_probs=150.9

Q ss_pred             cceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEEec-----CCeEEEEEccCCceE
Q psy10867         38 SPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSI-----ETKLHMWQISSGRLL  112 (343)
Q Consensus        38 ~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-----d~~i~v~~~~~~~~~  112 (343)
                      .+..++|.++|.+.++....+.|..|+.++++..............+++.+||+++++..     .+.+...+...+...
T Consensus        41 ~lEG~~~D~~G~Ly~~D~~~g~I~ri~p~g~~~~~~~~~~~~~p~gla~~~dG~l~va~~~~~~~~~~i~~~~~~~~~~~  120 (319)
T d2dg1a1          41 QLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQ  120 (319)
T ss_dssp             CEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCE
T ss_pred             CcEeCEECCCCCEEEEECCCCEEEEEECCCCeEEEEEeCCCCCeeEEEECCCCCEEEEecCCCccceeEEEEcCCCceee
Confidence            567899999999888887779999999887765555555566789999999999888742     234666665555544


Q ss_pred             EEecc--cCCCeEEEEEecCCCEEEEecC------CCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeeccccc
Q psy10867        113 ATASS--HYQPITIVKWSADSNFIVTGGE------DGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSL  184 (343)
Q Consensus       113 ~~~~~--~~~~v~~~~~~~~~~~l~s~~~------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (343)
                      .....  -......+++.++|++.++...      .+.+..++....                       .+..+...-.
T Consensus       121 ~~~~~~~~~~~~nd~~~d~~G~l~vtd~~~~~~~~~g~v~~~~~dg~-----------------------~~~~~~~~~~  177 (319)
T d2dg1a1         121 DIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFR-----------------------TVTPIIQNIS  177 (319)
T ss_dssp             EEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSC-----------------------CEEEEEEEES
T ss_pred             eeccCCCcccCCcceeEEeccceeecccccccccCcceeEEEecccc-----------------------eeEEEeeccc
Confidence            43322  1235778999999987766432      123444444332                       1122222334


Q ss_pred             ceEEEEeecCCCceEEEEeeCCCeEEEEecCCC-ceEEEe--------ecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEe
Q psy10867        185 PVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTG-EDLLSL--------ILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCL  255 (343)
Q Consensus       185 ~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~-~~~~~~--------~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~  255 (343)
                      ..+.++|+|+++ .++++-+..+.|..||+... ......        ........+++.++|++.++....+.|.+||.
T Consensus       178 ~pnGia~s~dg~-~lyvad~~~~~I~~~d~~~~g~~~~~~~~~~~~~~~~~~~PdGl~vD~~G~l~Va~~~~g~V~~~~p  256 (319)
T d2dg1a1         178 VANGIALSTDEK-VLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK  256 (319)
T ss_dssp             SEEEEEECTTSS-EEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECT
T ss_pred             eeeeeeeccccc-eEEEecccCCceEEEEEcCCCceeccccceeeeccCCccceeeeeEcCCCCEEEEEcCCCEEEEECC
Confidence            567899999983 35566677899999987642 211111        11234678999999998888888999999995


Q ss_pred             ecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeC
Q psy10867        256 RQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSA  299 (343)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~  299 (343)
                      . .+....+.++     ..-.++...+++++|.+++..+++...
T Consensus       257 ~-G~~l~~i~~P-----~~~~~~~~~~~~~~~~~~~~~~~~t~~  294 (319)
T d2dg1a1         257 R-GYPIGQILIP-----GRDEGHMLRSTHPQFIPGTNQLIICSN  294 (319)
T ss_dssp             T-SCEEEEEECT-----TGGGTCSCBCCEEEECTTSCEEEEEEE
T ss_pred             C-CcEEEEEeCC-----CcCCCcCceeeeEEEeCCCCEEEEEcC
Confidence            4 3333322211     111234556789999998877665543

>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Brain tumor cg10719-pa
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.40  E-value=1.9e-09  Score=83.48  Aligned_cols=218  Identities=11%  Similarity=0.133  Sum_probs=146.1

Q ss_pred             CCeEEEEecCCceEEEEEecCC-----CCcceEEEEeCC-ce-EEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEE
Q psy10867         14 SGAISVWEPKGGTLLMSYKGAS-----VLSPHSMCLLGN-DY-VLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQA   86 (343)
Q Consensus        14 dg~i~iwd~~~~~~~~~~~~~~-----~~~v~~~~~~~~-~~-~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~   86 (343)
                      ++.|++||. .|+.+..+....     ......+++.++ +. +++....++.|..++.........-.........+++
T Consensus        43 n~rI~v~d~-~G~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~~~~~~~~~p~~~av  121 (279)
T d1q7fa_          43 NHRIQIFDK-EGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYGQFVRKFGATILQHPRGVTV  121 (279)
T ss_dssp             GTEEEEECT-TSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECTTSCEEEEECTTTCSCEEEEEE
T ss_pred             CCEEEEEeC-CCCEEEEecccCCCcccccccccccccccccccceeccCCccccccccccccceeecCCCcccccceecc
Confidence            466777775 466666663321     113455666554 33 3344445567888876543322222244556788999


Q ss_pred             CCCCCEEEE-ecCCeEEEEEccCCceEEEe--cccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCC
Q psy10867         87 SPDAAYIAV-SIETKLHMWQISSGRLLATA--SSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPG  163 (343)
Q Consensus        87 s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~  163 (343)
                      .+++.++++ ...+.+.+++. +++.+..+  ..+......+++.++++.+++....+.|++||.... ...++.     
T Consensus       122 d~~G~i~v~~~~~~~~~~~~~-~g~~~~~~g~~~~~~~~~~i~~d~~g~i~v~d~~~~~V~~~d~~G~-~~~~~g-----  194 (279)
T d1q7fa_         122 DNKGRIIVVECKVMRVIIFDQ-NGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQ-YLRQIG-----  194 (279)
T ss_dssp             CTTSCEEEEETTTTEEEEECT-TSCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTCC-EEEEES-----
T ss_pred             ccCCcEEEEeeccceeeEecc-CCceeecccccccccccceeeeccceeEEeeeccccceeeeecCCc-eeeeec-----
Confidence            999998887 45678888885 46666655  345567889999999998888888899999997653 221110     


Q ss_pred             CCCCccccccceeeeecccccceEEEEeecCCCceEEEEee-CCCeEEEEecCCCceEEEeec---CCcEEEEEEcCCCC
Q psy10867        164 SSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVS-HDRTCKIFDLCTGEDLLSLIL---DTRLTCVAFDGTED  239 (343)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~-~d~~i~~wd~~~~~~~~~~~~---~~~i~~~~~~~~~~  239 (343)
                                     ..+.......|++.+++  +++++-. .++.|.+|+ .+++.+..+..   ......+++.|+|.
T Consensus       195 ---------------~~g~~~~P~giavD~~G--~i~Vad~~~~~~v~~f~-~~G~~~~~~~~~~~~~~p~~vav~~dG~  256 (279)
T d1q7fa_         195 ---------------GEGITNYPIGVGINSNG--EILIADNHNNFNLTIFT-QDGQLISALESKVKHAQCFDVALMDDGS  256 (279)
T ss_dssp             ---------------CTTTSCSEEEEEECTTC--CEEEEECSSSCEEEEEC-TTSCEEEEEEESSCCSCEEEEEEETTTE
T ss_pred             ---------------ccccccCCcccccccCC--eEEEEECCCCcEEEEEC-CCCCEEEEEeCCCCCCCEeEEEEeCCCc
Confidence                           12344557889999999  6666644 355799998 57888777753   33588999999987


Q ss_pred             EEEEEcCCCcEEEEEeecc
Q psy10867        240 NIYMGTSEGVIKSFCLRQV  258 (343)
Q Consensus       240 ~l~~~~~d~~i~i~d~~~~  258 (343)
                      + +++..+..|++|.....
T Consensus       257 l-~V~~~n~~v~~fr~~~~  274 (279)
T d1q7fa_         257 V-VLASKDYRLYIYRYVQL  274 (279)
T ss_dssp             E-EEEETTTEEEEEECSCC
T ss_pred             E-EEEeCCCeEEEEEeeee
Confidence            5 45567899999988763

>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP)
species: Squid (Loligo vulgaris) [TaxId: 6622]

Probab=99.39  E-value=1.2e-09  Score=86.06  Aligned_cols=223  Identities=8%  Similarity=0.022  Sum_probs=141.6

Q ss_pred             CeEEEEecCCceEEEEEecC----CCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCC----cceEEEEE
Q psy10867         15 GAISVWEPKGGTLLMSYKGA----SVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICP----GRISSMQA   86 (343)
Q Consensus        15 g~i~iwd~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~----~~v~~~~~   86 (343)
                      |.|..||..+++........    .. ....++|.+++..+.++...+.+..++.+............    ...+.+++
T Consensus        46 g~I~r~d~~~~~~~~~~~~~~~~~~g-~P~Gl~~~~dg~~l~vad~~~~i~~~~~~g~~~~~~~~~~~g~~~~~pndl~~  124 (314)
T d1pjxa_          46 GEILRIDLKTGKKTVICKPEVNGYGG-IPAGCQCDRDANQLFVADMRLGLLVVQTDGTFEEIAKKDSEGRRMQGCNDCAF  124 (314)
T ss_dssp             CEEEEECTTTCCEEEEECCEETTEEC-CEEEEEECSSSSEEEEEETTTEEEEEETTSCEEECCSBCTTSCBCBCCCEEEE
T ss_pred             CEEEEEECCCCcEEEEECCccccCCC-cceeEEEeCCCCEEEEEECCCeEEEEeCCCcEEEEEeccccccccCCCcEEEE
Confidence            56777787766544332221    12 36789999998655555444678888887654332221111    13578999


Q ss_pred             CCCCCEEEEec----------------CCeEEEEEccCCceEEEecccCCCeEEEEEecCCC-----EEEEecCCCeEEE
Q psy10867         87 SPDAAYIAVSI----------------ETKLHMWQISSGRLLATASSHYQPITIVKWSADSN-----FIVTGGEDGTICV  145 (343)
Q Consensus        87 s~~~~~l~~~~----------------d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-----~l~s~~~dg~i~i  145 (343)
                      .++|++.++..                .|.|..++. .++..... .....-..++|+|+++     ++++-+..+.|..
T Consensus       125 d~~G~lyvtd~~~~~~~~~~~~~~~~~~G~v~~~~~-dg~~~~~~-~~~~~pNGi~~~~d~d~~~~~lyv~d~~~~~i~~  202 (314)
T d1pjxa_         125 DYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTT-DGQMIQVD-TAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWS  202 (314)
T ss_dssp             CTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECT-TSCEEEEE-EEESSEEEEEEEECTTSCEEEEEEEETTTTEEEE
T ss_pred             CCCCCEEEecCccCcccccccceeccCCceEEEEee-cCceeEee-CCcceeeeeEECCCCCcceeEEEEEeecccceEE
Confidence            99999888732                124544443 34433332 2333457899999764     4555577889999


Q ss_pred             eecCccceeeeeecCCCCCCCCccccccceeeeecc-cccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee
Q psy10867        146 WQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQ-HSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI  224 (343)
Q Consensus       146 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~  224 (343)
                      ||+..........                ....+.. .......+++.++|  ++.++....+.|.+||.+.++....+.
T Consensus       203 ~d~~~~g~~~~~~----------------~~~~~~~~~~~~pdGiavD~~G--nlyVa~~~~g~I~~~dp~~g~~~~~i~  264 (314)
T d1pjxa_         203 YDIKGPAKIENKK----------------VWGHIPGTHEGGADGMDFDEDN--NLLVANWGSSHIEVFGPDGGQPKMRIR  264 (314)
T ss_dssp             EEEEETTEEEEEE----------------EEEECCCCSSCEEEEEEEBTTC--CEEEEEETTTEEEEECTTCBSCSEEEE
T ss_pred             eeccCccccceee----------------EEEEccccccccceeeEEecCC--cEEEEEcCCCEEEEEeCCCCEEEEEEE
Confidence            9876543222110                1111111 22345689999998  777777788999999988888777776


Q ss_pred             c-CCcEEEEEEcCCCCEEEE-EcCCCcEEEEEeecc
Q psy10867        225 L-DTRLTCVAFDGTEDNIYM-GTSEGVIKSFCLRQV  258 (343)
Q Consensus       225 ~-~~~i~~~~~~~~~~~l~~-~~~d~~i~i~d~~~~  258 (343)
                      . ....++++|.|+++.|++ .+.++.|..+++...
T Consensus       265 ~p~~~~t~~afg~d~~~lyVt~~~~g~i~~~~~~~~  300 (314)
T d1pjxa_         265 CPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN  300 (314)
T ss_dssp             CSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred             CCCCCEEEEEEeCCCCEEEEEECCCCcEEEEECCCC
Confidence            5 456899999999986554 566788888887643

>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Lactonase Drp35
species: Staphylococcus aureus [TaxId: 1280]

Probab=99.38  E-value=1.2e-09  Score=86.27  Aligned_cols=233  Identities=7%  Similarity=-0.036  Sum_probs=149.6

Q ss_pred             ceEEEEECCCCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecC----CCeEEEeecCcccee
Q psy10867         80 RISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGE----DGTICVWQLSRLICK  154 (343)
Q Consensus        80 ~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~----dg~i~iwd~~~~~~~  154 (343)
                      .+..++|.++|++.++ ...+.|..|+.+++.....+.........+++.++|+++++...    .+.+...+.......
T Consensus        41 ~lEG~~~D~~G~Ly~~D~~~g~I~ri~p~g~~~~~~~~~~~~~p~gla~~~dG~l~va~~~~~~~~~~i~~~~~~~~~~~  120 (319)
T d2dg1a1          41 QLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQ  120 (319)
T ss_dssp             CEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCE
T ss_pred             CcEeCEECCCCCEEEEECCCCEEEEEECCCCeEEEEEeCCCCCeeEEEECCCCCEEEEecCCCccceeEEEEcCCCceee
Confidence            4568999999997777 46789999998877666655555667889999999998776543    233455555443221


Q ss_pred             eeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeC------CCeEEEEecCCCceEEEeecCCc
Q psy10867        155 QTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSH------DRTCKIFDLCTGEDLLSLILDTR  228 (343)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~------d~~i~~wd~~~~~~~~~~~~~~~  228 (343)
                      ...                    ...........+++.++|  .+.++...      .+.+..++...+........-..
T Consensus       121 ~~~--------------------~~~~~~~~~nd~~~d~~G--~l~vtd~~~~~~~~~g~v~~~~~dg~~~~~~~~~~~~  178 (319)
T d2dg1a1         121 DII--------------------EDLSTAYCIDDMVFDSKG--GFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISV  178 (319)
T ss_dssp             EEE--------------------CSSSSCCCEEEEEECTTS--CEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESS
T ss_pred             eec--------------------cCCCcccCCcceeEEecc--ceeecccccccccCcceeEEEecccceeEEEeeccce
Confidence            111                    001123346789999999  66655322      23466666443332222233345


Q ss_pred             EEEEEEcCCCCEEEEE-cCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEe
Q psy10867        229 LTCVAFDGTEDNIYMG-TSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWH  307 (343)
Q Consensus       229 i~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd  307 (343)
                      .+.++|+|+++.|+++ +..+.|+.|++...........   .............-.+++.++|++.++....+.|.++|
T Consensus       179 pnGia~s~dg~~lyvad~~~~~I~~~d~~~~g~~~~~~~---~~~~~~~~~~~~PdGl~vD~~G~l~Va~~~~g~V~~~~  255 (319)
T d2dg1a1         179 ANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFG---ATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFN  255 (319)
T ss_dssp             EEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEE---EEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEEC
T ss_pred             eeeeeeccccceEEEecccCCceEEEEEcCCCceecccc---ceeeeccCCccceeeeeEcCCCCEEEEEcCCCEEEEEC
Confidence            6789999999977655 5688999999865322111000   00000111122356899999999888888899999999


Q ss_pred             cccceeeeecc-c------CCceEEEEEccCCCeeeec
Q psy10867        308 TISRQCLRTIQ-H------KGPVLGAFLGLLPPAIHDY  338 (343)
Q Consensus       308 ~~~~~~~~~~~-~------~~~v~~~~~sp~~~~l~~~  338 (343)
                      . .|+.+.++. .      ...+++++|.|+...+++.
T Consensus       256 p-~G~~l~~i~~P~~~~~~~~~~~~~~~~~~~~~~~~t  292 (319)
T d2dg1a1         256 K-RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIIC  292 (319)
T ss_dssp             T-TSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEE
T ss_pred             C-CCcEEEEEeCCCcCCCcCceeeeEEEeCCCCEEEEE
Confidence            5 788888776 2      2357899999988777654

>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.19  E-value=1.3e-09  Score=90.52  Aligned_cols=230  Identities=7%  Similarity=0.028  Sum_probs=141.3

Q ss_pred             EEECCCCCEEEEecCCeEEEEEccCCceEEEeccc---CCCeEEEEEecCCCEEEEec---------CCCeEEEeecCcc
Q psy10867         84 MQASPDAAYIAVSIETKLHMWQISSGRLLATASSH---YQPITIVKWSADSNFIVTGG---------EDGTICVWQLSRL  151 (343)
Q Consensus        84 ~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~l~s~~---------~dg~i~iwd~~~~  151 (343)
                      ..|.+++.++....+|.|.+||+.+++....+...   .-.+....|+||+++++...         ..+.+.++|+.++
T Consensus        22 ~~W~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~SpD~~~vl~~~~~~~~~r~s~~~~~~i~d~~~~  101 (465)
T d1xfda1          22 AKWISDTEFIYREQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHG  101 (465)
T ss_dssp             CCBSSSSCBCCCCSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSC
T ss_pred             CEEeCCCcEEEEeCCCcEEEEECCCCCEEEEEcCccccccccceeEECCCCCeEEEEEcccceeEeeccccEEEEEccCC
Confidence            46888888877777889999999988765444332   23567788999999887753         3577889999876


Q ss_pred             ceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecC--C--
Q psy10867        152 ICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILD--T--  227 (343)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~--~--  227 (343)
                      ...                    ++.........+....|+|+|  +.+|-.. ++.|.+.+...+...+.....  .  
T Consensus       102 ~~~--------------------~l~~~~~~~~~l~~~~wSPDG--~~iafv~-~~nl~~~~~~~~~~~~lt~~g~~~~i  158 (465)
T d1xfda1         102 DPQ--------------------SLDPPEVSNAKLQYAGWGPKG--QQLIFIF-ENNIYYCAHVGKQAIRVVSTGKEGVI  158 (465)
T ss_dssp             CCE--------------------ECCCTTCCSCCCSBCCBCSST--TCEEEEE-TTEEEEESSSSSCCEEEECCCBTTTE
T ss_pred             cee--------------------eccCccCCccccceeeeccCC--ceEEEEe-cceEEEEecCCCceEEEecccCccee
Confidence            432                    111122233456678899999  5666554 677888888777655443311  1  


Q ss_pred             ---------------cEEEEEEcCCCCEEEEEcC-CCcEEEEEeeccccc-----ccc-----------------cccCC
Q psy10867        228 ---------------RLTCVAFDGTEDNIYMGTS-EGVIKSFCLRQVPRT-----RDH-----------------HIQDS  269 (343)
Q Consensus       228 ---------------~i~~~~~~~~~~~l~~~~~-d~~i~i~d~~~~~~~-----~~~-----------------~~~~~  269 (343)
                                     .-..+-|||||++|+.... +..|..+.+......     ...                 .+...
T Consensus       159 ~nG~~d~vyeee~~~~~~a~~WSPDgk~iaf~~~D~s~V~~~~~~~~~~~~~p~~~~~~Yp~~G~~np~~~l~v~d~~~~  238 (465)
T d1xfda1         159 YNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGP  238 (465)
T ss_dssp             EEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSS
T ss_pred             eccccchhhhhhhccccceEEECCCCCeEEEEEecccccceeecccccccccceeeeeeccccCCCCCceeEEEEecCCC
Confidence                           1246779999999998643 344444443221100     000                 00000


Q ss_pred             C------CCCccccccCcEEEEEEccCCCEEEEEeC-C---CcEEEEecccceeeeecc--cCCce----EEEEEccCCC
Q psy10867        270 T------SNPDFIGHEKQVTSLSCSITGITLLSSSA-D---ETLKIWHTISRQCLRTIQ--HKGPV----LGAFLGLLPP  333 (343)
Q Consensus       270 ~------~~~~~~~~~~~v~~~~~s~~~~~l~s~~~-d---g~i~iwd~~~~~~~~~~~--~~~~v----~~~~~sp~~~  333 (343)
                      .      +..........+..+.|+|++++++.... +   ..|.++|..+|++...+.  ..+.|    ....|+|||+
T Consensus       239 ~~~~~~~~~~~~~~~~~y~~~~~W~~d~~~~~~~~nR~q~~~~i~~~d~~tg~~~~~~~e~~~~wv~~~~~~p~~~~dg~  318 (465)
T d1xfda1         239 THDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGR  318 (465)
T ss_dssp             CCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSC
T ss_pred             cEEEEEeccCcCccccceeeeeEEcCCCeEEEEEEccccccceEEEEcCCCCcEEEEEEEcCCceEeccCCceeEccCCC
Confidence            0      00111122335778999999987665432 2   258889999987765554  22222    3468999998


Q ss_pred             eee
Q psy10867        334 AIH  336 (343)
Q Consensus       334 ~l~  336 (343)
                      .++
T Consensus       319 ~~~  321 (465)
T d1xfda1         319 KFF  321 (465)
T ss_dssp             SEE
T ss_pred             eeE
Confidence            653

>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Regucalcin
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.18  E-value=6e-08  Score=75.37  Aligned_cols=228  Identities=9%  Similarity=0.023  Sum_probs=149.1

Q ss_pred             EEEECCC-CCEEEEe-cCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecC
Q psy10867         83 SMQASPD-AAYIAVS-IETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFG  160 (343)
Q Consensus        83 ~~~~s~~-~~~l~~~-~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~  160 (343)
                      ...|.+. +.+..+. ..+.|..||..+++.. .+. ....+.++++.+++.+++++ .+ .+.++|..+++......  
T Consensus        22 gp~wd~~~~~l~wvDi~~~~I~r~d~~~g~~~-~~~-~~~~~~~i~~~~dg~l~va~-~~-gl~~~d~~tg~~~~l~~--   95 (295)
T d2ghsa1          22 GPTFDPASGTAWWFNILERELHELHLASGRKT-VHA-LPFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLHAE--   95 (295)
T ss_dssp             EEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEE-CSSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEEEC--
T ss_pred             CCeEECCCCEEEEEECCCCEEEEEECCCCeEE-EEE-CCCCcEEEEEecCCCEEEEE-eC-ccEEeecccceeeEEee--
Confidence            4567764 4555553 5789999999887643 332 34568899999998777654 44 58899998864322110  


Q ss_pred             CCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeC----CCeEEEEecCCCceEEEeecCCcEEEEEEcC
Q psy10867        161 IPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSH----DRTCKIFDLCTGEDLLSLILDTRLTCVAFDG  236 (343)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~----d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~  236 (343)
                                      .........++.+.+.|+|  .+.++...    .+.-.+|.+..++.......-.....++|++
T Consensus        96 ----------------~~~~~~~~~~nd~~vd~~G--~iw~~~~~~~~~~~~g~l~~~~~g~~~~~~~~~~~~Ng~~~s~  157 (295)
T d2ghsa1          96 ----------------LESDLPGNRSNDGRMHPSG--ALWIGTMGRKAETGAGSIYHVAKGKVTKLFADISIPNSICFSP  157 (295)
T ss_dssp             ----------------SSTTCTTEEEEEEEECTTS--CEEEEEEETTCCTTCEEEEEEETTEEEEEEEEESSEEEEEECT
T ss_pred             ----------------eecCCCcccceeeEECCCC--CEEEEeccccccccceeEeeecCCcEEEEeeccCCcceeeecC
Confidence                            0001123357889999998  55555332    2345667666776555544445577899999


Q ss_pred             CCCEEEEE-cCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeee
Q psy10867        237 TEDNIYMG-TSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLR  315 (343)
Q Consensus       237 ~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~  315 (343)
                      +++.++.+ +..+.|+.|++..........   ........+..+....+++..+|++.++.-..+.|..|| .+|+.+.
T Consensus       158 d~~~l~~~dt~~~~I~~~~~d~~~~~~~~~---~~~~~~~~~~~g~pdG~~vD~~GnlWva~~~~g~V~~~d-p~G~~~~  233 (295)
T d2ghsa1         158 DGTTGYFVDTKVNRLMRVPLDARTGLPTGK---AEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYD-TDGNHIA  233 (295)
T ss_dssp             TSCEEEEEETTTCEEEEEEBCTTTCCBSSC---CEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEEC-TTCCEEE
T ss_pred             CCceEEEeecccceeeEeeecccccccccc---eEEEeccCcccccccceEEcCCCCEEeeeeCCCceEEec-CCCcEee
Confidence            99876654 567889999875422111000   000111223345678899999999888777788999999 4789999


Q ss_pred             ecc-cCCceEEEEEc-cCCCeeeec
Q psy10867        316 TIQ-HKGPVLGAFLG-LLPPAIHDY  338 (343)
Q Consensus       316 ~~~-~~~~v~~~~~s-p~~~~l~~~  338 (343)
                      .+. ....+++++|- ||.+.|+..
T Consensus       234 ~i~lP~~~~T~~~FGG~d~~~LyvT  258 (295)
T d2ghsa1         234 RYEVPGKQTTCPAFIGPDASRLLVT  258 (295)
T ss_dssp             EEECSCSBEEEEEEESTTSCEEEEE
T ss_pred             EecCCCCceEEEEEeCCCCCEEEEE
Confidence            988 55679999996 787777654

>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Regucalcin
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.14  E-value=4.7e-07  Score=70.17  Aligned_cols=209  Identities=9%  Similarity=0.032  Sum_probs=141.8

Q ss_pred             CCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecc----cCCcceEEEEECCC
Q psy10867         14 SGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRL----ICPGRISSMQASPD   89 (343)
Q Consensus        14 dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~----~~~~~v~~~~~s~~   89 (343)
                      .+.|.-||..+++.. .+... . .+.++++.+++.++++..+  .+.++|..+++......    .....++.+.+.|+
T Consensus        39 ~~~I~r~d~~~g~~~-~~~~~-~-~~~~i~~~~dg~l~va~~~--gl~~~d~~tg~~~~l~~~~~~~~~~~~nd~~vd~~  113 (295)
T d2ghsa1          39 ERELHELHLASGRKT-VHALP-F-MGSALAKISDSKQLIASDD--GLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPS  113 (295)
T ss_dssp             GTEEEEEETTTTEEE-EEECS-S-CEEEEEEEETTEEEEEETT--EEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTT
T ss_pred             CCEEEEEECCCCeEE-EEECC-C-CcEEEEEecCCCEEEEEeC--ccEEeecccceeeEEeeeecCCCcccceeeEECCC
Confidence            577888888776543 34333 3 6789999999988887653  58899999887543322    12235889999999


Q ss_pred             CCEEEEec-----CCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEE-EEecCCCeEEEeecCccceeeeeecCCCC
Q psy10867         90 AAYIAVSI-----ETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFI-VTGGEDGTICVWQLSRLICKQTVAFGIPG  163 (343)
Q Consensus        90 ~~~l~~~~-----d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~s~~~dg~i~iwd~~~~~~~~~~~~~~~~  163 (343)
                      |++.++..     .+.-.+|.+..++....... -..-..++|+++++.+ ++-+..+.|..+++........       
T Consensus       114 G~iw~~~~~~~~~~~~g~l~~~~~g~~~~~~~~-~~~~Ng~~~s~d~~~l~~~dt~~~~I~~~~~d~~~~~~~-------  185 (295)
T d2ghsa1         114 GALWIGTMGRKAETGAGSIYHVAKGKVTKLFAD-ISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPT-------  185 (295)
T ss_dssp             SCEEEEEEETTCCTTCEEEEEEETTEEEEEEEE-ESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBS-------
T ss_pred             CCEEEEeccccccccceeEeeecCCcEEEEeec-cCCcceeeecCCCceEEEeecccceeeEeeecccccccc-------
Confidence            99888742     23566777777765554443 3346789999998855 5556678899888754321110       


Q ss_pred             CCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecC-CcEEEEEEc-CCCCEE
Q psy10867        164 SSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILD-TRLTCVAFD-GTEDNI  241 (343)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~-~~i~~~~~~-~~~~~l  241 (343)
                             ..........+.......+++..+|  ++.++.-..+.|..|| ..++.+..+..+ ..+++++|- |+.+.|
T Consensus       186 -------~~~~~~~~~~~~~g~pdG~~vD~~G--nlWva~~~~g~V~~~d-p~G~~~~~i~lP~~~~T~~~FGG~d~~~L  255 (295)
T d2ghsa1         186 -------GKAEVFIDSTGIKGGMDGSVCDAEG--HIWNARWGEGAVDRYD-TDGNHIARYEVPGKQTTCPAFIGPDASRL  255 (295)
T ss_dssp             -------SCCEEEEECTTSSSEEEEEEECTTS--CEEEEEETTTEEEEEC-TTCCEEEEEECSCSBEEEEEEESTTSCEE
T ss_pred             -------cceEEEeccCcccccccceEEcCCC--CEEeeeeCCCceEEec-CCCcEeeEecCCCCceEEEEEeCCCCCEE
Confidence                   0001122233345567889999988  6777776788999999 578888888865 569999996 676766


Q ss_pred             EEEc
Q psy10867        242 YMGT  245 (343)
Q Consensus       242 ~~~~  245 (343)
                      ++.+
T Consensus       256 yvTt  259 (295)
T d2ghsa1         256 LVTS  259 (295)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            6543

>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Tricorn protease N-terminal domain
family: Tricorn protease N-terminal domain
domain: Tricorn protease N-terminal domain
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.01  E-value=6.6e-08  Score=74.53  Aligned_cols=229  Identities=13%  Similarity=0.085  Sum_probs=123.9

Q ss_pred             EEeCC--ceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-e-cC-----CeEEEEEccCCceEE
Q psy10867         43 CLLGN--DYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-S-IE-----TKLHMWQISSGRLLA  113 (343)
Q Consensus        43 ~~~~~--~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~-~d-----~~i~v~~~~~~~~~~  113 (343)
                      ..+|+  |..++-... +.|.+.|+.+++..+ +..+.+.+...+|||||+.||- . .+     ..|.+++..+++..+
T Consensus         5 ~~sPdi~G~~v~f~~~-~dl~~~d~~~g~~~~-Lt~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g~~~~   82 (281)
T d1k32a2           5 LLNPDIHGDRIIFVCC-DDLWEHDLKSGSTRK-IVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIKR   82 (281)
T ss_dssp             CEEEEEETTEEEEEET-TEEEEEETTTCCEEE-EECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEEEE
T ss_pred             ccCCCCCCCEEEEEeC-CcEEEEECCCCCEEE-EecCCCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEecCCceEE
Confidence            45677  766666555 678888999887654 4466778899999999999984 2 22     248888887776554


Q ss_pred             Eecc------cCCCeEEEEEecCCCEEEEecCC------CeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecc
Q psy10867        114 TASS------HYQPITIVKWSADSNFIVTGGED------GTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQ  181 (343)
Q Consensus       114 ~~~~------~~~~v~~~~~~~~~~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (343)
                      ....      .........|+|+++.|+.....      ..+...+......                       ..  .
T Consensus        83 lt~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~--~  137 (281)
T d1k32a2          83 ITYFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINF-----------------------VP--L  137 (281)
T ss_dssp             CCCCCEEEETTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEE-----------------------EE--C
T ss_pred             eeecCCCccCccccccccccCCCCCEEEEEEccCCCccceeeeeecCCCcee-----------------------EE--e
Confidence            3211      12345678899999988875432      2244444443211                       11  1


Q ss_pred             cccceEEEEeecCCCceEEEEeeCCC-----------eEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcCC--C
Q psy10867        182 HSLPVTHVTLSKLGAKSRVASVSHDR-----------TCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSE--G  248 (343)
Q Consensus       182 ~~~~v~~~~~~~~~~~~~l~~~~~d~-----------~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d--~  248 (343)
                      +....... +.+++. ..++....+.           ..........................++++. .++....+  .
T Consensus       138 ~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~  214 (281)
T d1k32a2         138 NLGPATHI-LFADGR-RVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMSTHVSSPVIVGHR-IYFITDIDGFG  214 (281)
T ss_dssp             CSCSCSEE-EEETTE-EEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEECCSSCCEEEEEETTE-EEEEECTTSSC
T ss_pred             cCCcccee-eecCCC-eEEEeeccccceeeeeccCCcceeeeeccccceeeccCCccccceeeeeccc-cceeccccccc
Confidence            11222222 333331 3333332221           1112222222222222334444555556542 23333333  3


Q ss_pred             cEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeee
Q psy10867        249 VIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLR  315 (343)
Q Consensus       249 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~  315 (343)
                      .|+++|+......+            +..+. ......|+|||+.|+.. .++.|+++|+.+++...
T Consensus       215 ~l~~~d~~g~~~~~------------lt~~~-~~~~~~~SpDG~~I~f~-~~~~l~~~d~~~g~~~~  267 (281)
T d1k32a2         215 QIYSTDLDGKDLRK------------HTSFT-DYYPRHLNTDGRRILFS-KGGSIYIFNPDTEKIEK  267 (281)
T ss_dssp             EEEEEETTSCSCEE------------CCCCC-SSCEEEEEESSSCEEEE-ETTEEEEECTTTCCEEE
T ss_pred             ceEEEeCCCCceEE------------eecCC-CcccccCcCCCCEEEEE-eCCEEEEEECCCCCEEE
Confidence            56666765543211            11111 11224689999988764 46789999998876543

>d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Paracoccus denitrificans [TaxId: 266]

Probab=98.90  E-value=8.2e-08  Score=75.90  Aligned_cols=305  Identities=10%  Similarity=-0.023  Sum_probs=163.9

Q ss_pred             EEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCc-eEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEE
Q psy10867          7 VAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGND-YVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQ   85 (343)
Q Consensus         7 ~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~   85 (343)
                      ..+|++..|.|+|+-+.+++.+..+......+-..--++... +++.-+....+-.......++....=..|.   -.+.
T Consensus        15 ~f~SgG~sG~v~v~G~PSmR~l~~ipvF~~~~~~G~G~~~es~~il~~~~~~~t~~~l~~~g~~~~~~GD~HH---P~~S   91 (459)
T d1fwxa2          15 GFWSSGQSGEMRILGIPSMRELMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAANGKRIHDNGDLHH---VHMS   91 (459)
T ss_dssp             EEECCBTTCEEEEEEETTCCEEEEEESSSCCTTTCTTTBHHHHHHHHTTCC--------------CCCCCBCC---EEEE
T ss_pred             EEeeCCccceEEEEecCCcceEEEeeeecCCCCcccCcchhHHHHhhcccChhhhhhhhccCcccccCCCcCC---Cccc
Confidence            345555689999999999999988765432111111111000 000000000000000000000000000111   1445


Q ss_pred             EC---CCCCEEEEe--cCCeEEEEEccCCceEEEecc-cCCCeEEEEEec--CCCEEEEecCCC----------------
Q psy10867         86 AS---PDAAYIAVS--IETKLHMWQISSGRLLATASS-HYQPITIVKWSA--DSNFIVTGGEDG----------------  141 (343)
Q Consensus        86 ~s---~~~~~l~~~--~d~~i~v~~~~~~~~~~~~~~-~~~~v~~~~~~~--~~~~l~s~~~dg----------------  141 (343)
                      +.   +||++|...  .+++|.+.|+++.+..+...- ....+..+...+  +..+++..+.+.                
T Consensus        92 ~TdGtyDGrylFVNDkan~RVAvIdl~~fkt~kIi~iPn~~~~HG~r~~~~p~T~YV~~~~e~~vP~pndg~~l~d~~~y  171 (459)
T d1fwxa2          92 FTEGKYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANY  171 (459)
T ss_dssp             EETTEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGG-E
T ss_pred             ccCCccceeEEEEEcCCCceEEEEECcceeeeEEEecCCCCCCceeecccCCCeEEEEccCccccccCCCCccccchhhc
Confidence            54   388999874  578999999999987664432 234566666644  556777766532                


Q ss_pred             --eEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCC-------------
Q psy10867        142 --TICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHD-------------  206 (343)
Q Consensus       142 --~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d-------------  206 (343)
                        .+...|..+.+...++..                       ......+.++++|  +++++.+.+             
T Consensus       172 ~~~~t~ID~~tm~V~~QV~V-----------------------~g~ld~~~~s~dG--K~af~TsyNSE~g~~l~e~ta~  226 (459)
T d1fwxa2         172 VNVFTAVDADKWEVAWQVLV-----------------------SGNLDNCDADYEG--KWAFSTSYNSEKGMTLPEMTAA  226 (459)
T ss_dssp             EEEEEEEETTTTEEEEEEEE-----------------------SSCCCCEEECSSS--SEEEEEESCTTCCSSHHHHTCC
T ss_pred             ceEEEEEecCCceEEEEeee-----------------------CCChhccccCCCC--CEEEEEeccccCCcchhhcccc
Confidence              255677777665544331                       1234457777777  555554432             


Q ss_pred             -------------------------CeEEEEecCCC---ceEEEeecCCcEEEEEEcCCCCEEEEEcC-CCcEEEEEeec
Q psy10867        207 -------------------------RTCKIFDLCTG---EDLLSLILDTRLTCVAFDGTEDNIYMGTS-EGVIKSFCLRQ  257 (343)
Q Consensus       207 -------------------------~~i~~wd~~~~---~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d~~i~i~d~~~  257 (343)
                                               +.+.+.|.++.   ..+..+..+.....+.++|||+++++++. +.++.++|++.
T Consensus       227 e~D~i~V~n~~rie~av~~Gk~~eingV~VVD~~~~~~~~v~~yIPVpKsPHGV~vSPDGKyi~VaGKLs~tVSViD~~K  306 (459)
T d1fwxa2         227 EMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTR  306 (459)
T ss_dssp             SEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGG--CSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGG
T ss_pred             cceEEEEechHHhHHhhhcCCcEEeCCceeecccccCCcceeEEEecCCCCCceEECCCCCEEEEeCCcCCcEEEEEehh
Confidence                                     12344444321   23334445566778899999999988654 88999999986


Q ss_pred             ccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccc----------eeeeecccCCceEEE-
Q psy10867        258 VPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISR----------QCLRTIQHKGPVLGA-  326 (343)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~----------~~~~~~~~~~~v~~~-  326 (343)
                      ......-.......+..-....-.....+|+.+|.-..|---|..|--|++...          ..+..+.....+-.+ 
T Consensus       307 i~~~~~~~~~~~~~~~~e~elglgPLht~fd~~g~aytslfids~v~kw~~~~~~~~~~~~~~~~v~~k~~v~y~~gh~~  386 (459)
T d1fwxa2         307 FDAVFYENADPRSAVVAEPELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLK  386 (459)
T ss_dssp             HHHHHHSCC-GGGGEEECCBCCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEE
T ss_pred             hhhhhcccCCccccEEeecccCcCccccccCCCceEEEEeeccceEEEEecchhhhhhccccCCcceeccccccCCCCCc
Confidence            543321110000001111112234566789888876667778999999998643          344444422222222 


Q ss_pred             -----EEccCCCeeeecc
Q psy10867        327 -----FLGLLPPAIHDYD  339 (343)
Q Consensus       327 -----~~sp~~~~l~~~~  339 (343)
                           ...|+|++|++.+
T Consensus       387 ~~~g~t~~~dgk~l~~~n  404 (459)
T d1fwxa2         387 TVMGETLDATNDWLVCLS  404 (459)
T ss_dssp             ETTTTSTTCCSSEEEEEE
T ss_pred             cCcCCcCCCCCCEEEEec
Confidence                 2468999988754

>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=98.77  E-value=4.2e-06  Score=70.91  Aligned_cols=314  Identities=9%  Similarity=0.028  Sum_probs=163.5

Q ss_pred             ceEEEecCC-CCeEEEEecC-CceEEEEEecCCCCc----------ceEEEEeCCceEEEEEcCCCeEEEEeCCCcccce
Q psy10867          5 NEVAFSYDG-SGAISVWEPK-GGTLLMSYKGASVLS----------PHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQ   72 (343)
Q Consensus         5 ~~~~~s~~~-dg~i~iwd~~-~~~~~~~~~~~~~~~----------v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~   72 (343)
                      ...+|.++. ++.|...|.. +|+.+.+++......          -+.+++. ++++++... ++.+.-.|.++++...
T Consensus        62 ~g~vyv~t~~~~~v~Alda~~tG~~~W~~~~~~~~~~~~~~~~~~~~rg~a~~-~~~i~~~~~-~g~l~alda~tG~~~w  139 (571)
T d2ad6a1          62 GDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYG-AGQIVKKQA-NGHLLALDAKTGKINW  139 (571)
T ss_dssp             TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEE-TTEEEEECT-TSEEEEEETTTCCEEE
T ss_pred             CCEEEEecCCCCeEEEEeCCCCCceEEEecCCCCcccccccccCcCCCcceee-CCeEEEEeC-CCcEEeeehhhhhhhc
Confidence            455666665 6788888874 799999876322101          1234443 345555544 4888888999988763


Q ss_pred             ecccC---C-cceEEEEECCCCCEEEEe------cCCeEEEEEccCCceEEEecccC-----------------------
Q psy10867         73 LRLIC---P-GRISSMQASPDAAYIAVS------IETKLHMWQISSGRLLATASSHY-----------------------  119 (343)
Q Consensus        73 ~~~~~---~-~~v~~~~~s~~~~~l~~~------~d~~i~v~~~~~~~~~~~~~~~~-----------------------  119 (343)
                      .....   . ..++.--.-.++..++..      .+|.|+-+|+.+|+.+-++....                       
T Consensus       140 ~~~~~~~~~~~~~t~~p~v~~~~vivg~~~~~~~~~G~v~a~D~~TG~~~W~~~t~~~~~~~~~~~~~~~~~~~~~~~~~  219 (571)
T d2ad6a1         140 EVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGL  219 (571)
T ss_dssp             EEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSH
T ss_pred             cccccccccccceeecCeEeCCeEEEeeccccccccCcEEEEECCCCcEEEEEeccCCcccccccccccccccccCcccc
Confidence            32211   1 111111111145555543      36789999999999987653210                       


Q ss_pred             --------------CCe-EEEEEecCCCEEEEecC----------------CCeEEEeecCccceeeeeecCCCCCCCCc
Q psy10867        120 --------------QPI-TIVKWSADSNFIVTGGE----------------DGTICVWQLSRLICKQTVAFGIPGSSGKG  168 (343)
Q Consensus       120 --------------~~v-~~~~~~~~~~~l~s~~~----------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~  168 (343)
                                    +.+ ....+.++...++.+..                ...+.-.|.++++.....+......-   
T Consensus       220 ~~~~~~~~~~~~~gg~vW~~~s~D~~~g~~y~~tg~~~p~~~~~r~g~n~~s~svvAld~~TG~~~W~~q~~~~D~W---  296 (571)
T d2ad6a1         220 GTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEW---  296 (571)
T ss_dssp             HHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSS---
T ss_pred             cccccCCcccccCCCccccccccchhcCeeeeecccccCccccccccccccccceeeeeccchhheecccccCcccc---
Confidence                          111 22455566665555443                23566677777766655431100000   


Q ss_pred             cccccceeeeecccccceEEEEeecCCC-ceEEEEeeCCCeEEEEecCCCceEEEeecC--------------Cc-----
Q psy10867        169 VTGLTEPLHVKSQHSLPVTHVTLSKLGA-KSRVASVSHDRTCKIFDLCTGEDLLSLILD--------------TR-----  228 (343)
Q Consensus       169 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~--------------~~-----  228 (343)
                               .+. ............++. ...++.++.+|.+.++|..+++.+......              .+     
T Consensus       297 ---------d~D-~~~~~~l~~~~~~g~~~~~v~~~~k~G~l~vlDr~tG~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~  366 (571)
T d2ad6a1         297 ---------DFA-GVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPE  366 (571)
T ss_dssp             ---------CCC-CCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGG
T ss_pred             ---------ccc-cccccceeeeeccCccccceeeccccceEEEEecCCCcEeeeeccCCcccccccccccccccccCcc
Confidence                     000 011111122222331 135678889999999999999887543210              00     


Q ss_pred             ---------------------EEEEEEcCCCCEEEEEcCCCcEEEEEeeccccccc------------------------
Q psy10867        229 ---------------------LTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRD------------------------  263 (343)
Q Consensus       229 ---------------------i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~------------------------  263 (343)
                                           -...+++|+...+++...+....+...........                        
T Consensus       367 ~~~~~~~~g~~~~p~~~Gg~~w~~~a~dP~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l  446 (571)
T d2ad6a1         367 FATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQI  446 (571)
T ss_dssp             GCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEE
T ss_pred             cccccccCceEEEeccccccccccceECCCCceEEEeccccccccccccccccCCccccccceeeccccCCcccCCcccE
Confidence                                 01256788878877766543322221110000000                        


Q ss_pred             --ccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecccCCceEE--EEEccCCCe
Q psy10867        264 --HHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQHKGPVLG--AFLGLLPPA  334 (343)
Q Consensus       264 --~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~--~~~sp~~~~  334 (343)
                        +...+++.+-+.. ...+..+=.++-.+.++++++.||.++-+|.++|+.+.+++....+.+  +.|..||+.
T Consensus       447 ~AiD~~TG~~~W~~~-~~~~~~~g~l~TagglVf~G~~dg~l~A~Da~tGe~lW~~~l~~~~~a~P~ty~~dGkq  520 (571)
T d2ad6a1         447 RAFDLTTGKAKWTKW-EKFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQ  520 (571)
T ss_dssp             EEECTTTCCEEEEEE-ESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred             EEeccCCCceeeEcC-CCCCCCcceeEecCCEEEEECCCCeEEEEECCCCcEEEEEECCCCceecceEEEECCEE
Confidence              0000000000000 000000001122356788899999999999999999999984433332  666778864

>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Tricorn protease N-terminal domain
family: Tricorn protease N-terminal domain
domain: Tricorn protease N-terminal domain
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=98.74  E-value=1.5e-06  Score=66.58  Aligned_cols=100  Identities=13%  Similarity=0.035  Sum_probs=65.9

Q ss_pred             EECCC--CCEEEEecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecC----C--CeEEEeecCccceeee
Q psy10867         85 QASPD--AAYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGE----D--GTICVWQLSRLICKQT  156 (343)
Q Consensus        85 ~~s~~--~~~l~~~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~----d--g~i~iwd~~~~~~~~~  156 (343)
                      ..+||  |+.++-..++.|.+.|+.+++.. .+..+.+.+...+|+|||+.|+....    +  ..|.+++..++...+-
T Consensus         5 ~~sPdi~G~~v~f~~~~dl~~~d~~~g~~~-~Lt~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g~~~~l   83 (281)
T d1k32a2           5 LLNPDIHGDRIIFVCCDDLWEHDLKSGSTR-KIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIKRI   83 (281)
T ss_dssp             CEEEEEETTEEEEEETTEEEEEETTTCCEE-EEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEEEEC
T ss_pred             ccCCCCCCCEEEEEeCCcEEEEECCCCCEE-EEecCCCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEecCCceEEe
Confidence            35788  99998777888999999888764 45566777899999999998886532    2  2466777766543221


Q ss_pred             eecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEe
Q psy10867        157 VAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASV  203 (343)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~  203 (343)
                      ..                ................|+|++  +.++..
T Consensus        84 t~----------------~~~~~~~~~~~~~~~~~spdg--~~l~~~  112 (281)
T d1k32a2          84 TY----------------FSGKSTGRRMFTDVAGFDPDG--NLIIST  112 (281)
T ss_dssp             CC----------------CCEEEETTEECSEEEEECTTC--CEEEEE
T ss_pred             ee----------------cCCCccCccccccccccCCCC--CEEEEE
Confidence            00                001111223345678899999  566653

>d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylobacterium extorquens [TaxId: 408]

Probab=98.69  E-value=2.4e-05  Score=66.49  Aligned_cols=206  Identities=11%  Similarity=-0.012  Sum_probs=112.0

Q ss_pred             ceEEEec-CCCCeEEEEec-CCceEEEEEecCCCC----------cceEEEEeCC----ceEEEEEcCCCeEEEEeCCCc
Q psy10867          5 NEVAFSY-DGSGAISVWEP-KGGTLLMSYKGASVL----------SPHSMCLLGN----DYVLGVEKGKPMIQAWPVNSQ   68 (343)
Q Consensus         5 ~~~~~s~-~~dg~i~iwd~-~~~~~~~~~~~~~~~----------~v~~~~~~~~----~~~~~~~~~~~~i~iw~~~~~   68 (343)
                      ...+|.+ +.++.+...|. .+|+.+.++......          .-+.+++.++    +..+..+..|+.|.-.|.+++
T Consensus        62 ~g~ly~~t~~~~~v~a~d~~~tG~~~W~~~~~~~~~~~~~~~~~~~~RGv~~~~~~~~~~~~v~~~t~dg~l~Alda~tG  141 (596)
T d1w6sa_          62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETG  141 (596)
T ss_dssp             TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTC
T ss_pred             CCEEEEeeCCCCcEEEEeCCCCCCEEEEecCCCCcccccccccccccceeEEecCCCCCceEEEEEeCCCCeEeeccccC
Confidence            3456544 33577877786 589999987643210          1134566543    234556666689998999999


Q ss_pred             ccceecccCC-cceEEEEECC---CCCEEEEe------cCCeEEEEEccCCceEEEecccC-------------------
Q psy10867         69 EKAQLRLICP-GRISSMQASP---DAAYIAVS------IETKLHMWQISSGRLLATASSHY-------------------  119 (343)
Q Consensus        69 ~~~~~~~~~~-~~v~~~~~s~---~~~~l~~~------~d~~i~v~~~~~~~~~~~~~~~~-------------------  119 (343)
                      +....+.... ..-..+.-+|   ++.+++..      ..|.|+-+|+.+|+++-++....                   
T Consensus       142 ~~~w~~~~~d~~~~~~~t~~P~v~~~~vivg~~~~e~~~~G~v~A~Da~TG~~~W~~~t~~~~~~~~~~~~~~~~~~~~g  221 (596)
T d1w6sa_         142 ETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYG  221 (596)
T ss_dssp             CEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGC
T ss_pred             ceeccccccccccccccccCCcEECCeEEEeeccccccccCceEEEECCCCcEEEEeeccCCcccccccccccccccccc
Confidence            8774432111 0000111111   45555542      24889999999999987653110                   


Q ss_pred             ------------------CC-eEEEEEecCCCEEEEecC----------------CCeEEEeecCccceeeeeecCCCCC
Q psy10867        120 ------------------QP-ITIVKWSADSNFIVTGGE----------------DGTICVWQLSRLICKQTVAFGIPGS  164 (343)
Q Consensus       120 ------------------~~-v~~~~~~~~~~~l~s~~~----------------dg~i~iwd~~~~~~~~~~~~~~~~~  164 (343)
                                        .. -..+.+.+...+++.+..                ...+.-.|+++++....++......
T Consensus       222 ~~~~~~~tw~g~~~~~gg~~~W~~~s~D~~~~lvy~~tg~~~p~~~~~r~g~n~ys~sivAlD~~TG~~~W~~Q~~~~D~  301 (596)
T d1w6sa_         222 QKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDE  301 (596)
T ss_dssp             CTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCS
T ss_pred             ccccccccCCCCceecCCCccccccccccCCCeeecccccccccccccccccccccccccccccccccccccccceeccc
Confidence                              01 123455565665555433                2346667777777665443111100


Q ss_pred             CCCccccccceeeeecccccceEEEEe-ecCCC-ceEEEEeeCCCeEEEEecCCCceEEEe
Q psy10867        165 SGKGVTGLTEPLHVKSQHSLPVTHVTL-SKLGA-KSRVASVSHDRTCKIFDLCTGEDLLSL  223 (343)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~-~~~l~~~~~d~~i~~wd~~~~~~~~~~  223 (343)
                      -.-            . ......-+.. ..+++ ...++....+|.+.++|..+++.+...
T Consensus       302 Wd~------------d-~~~~~~l~d~~~~~G~~~~~v~~~~k~G~~~vlDr~tG~~i~~~  349 (596)
T d1w6sa_         302 WDY------------A-GVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSAN  349 (596)
T ss_dssp             SCC------------C-CCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred             cCC------------c-cccceeeeeccccccccccceeccccccceeeecCCCCceeeec
Confidence            000            0 0011111111 12221 146777888999999999999877544

>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Comamonas testosteroni [TaxId: 285]

Probab=98.65  E-value=2.1e-05  Score=66.71  Aligned_cols=311  Identities=9%  Similarity=0.070  Sum_probs=162.0

Q ss_pred             ceEEEecCCCCeEEEEecCCceEEEEEecCCCC----------cceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceec
Q psy10867          5 NEVAFSYDGSGAISVWEPKGGTLLMSYKGASVL----------SPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLR   74 (343)
Q Consensus         5 ~~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~----------~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~   74 (343)
                      ..++|.++.++.|.-.|.++|+.+.+++.....          .-..+.+. ++++++... ++.+.-.|.++++.+...
T Consensus        77 ~g~vyv~t~~~~v~AlDa~TG~~~W~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~v~~~t~-~g~l~alda~tG~~~W~~  154 (573)
T d1kb0a2          77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALW-KGKVYVGAW-DGRLIALDAATGKEVWHQ  154 (573)
T ss_dssp             TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEE-TTEEEEECT-TSEEEEEETTTCCEEEEE
T ss_pred             CCEEEEECCCCeEEEEeCCCCCeEEEeCCCCCcccccccccccccccceEE-CCcEEEEec-ccceeeeccccccceecc
Confidence            567788888999999999999999987643210          11223333 334444444 478888888888876322


Q ss_pred             cc--CC-cceEEEEECC---CCCEEEEe------cCCeEEEEEccCCceEEEecccC-----------------------
Q psy10867         75 LI--CP-GRISSMQASP---DAAYIAVS------IETKLHMWQISSGRLLATASSHY-----------------------  119 (343)
Q Consensus        75 ~~--~~-~~v~~~~~s~---~~~~l~~~------~d~~i~v~~~~~~~~~~~~~~~~-----------------------  119 (343)
                      ..  +. ..+. +.-.|   ++..++.+      ..|.|.-+|.++|+.+-.+....                       
T Consensus       155 ~~~~~~~~~~~-~~~~p~v~~~~vivg~~~~~~~~~G~v~a~D~~TG~~~W~~~t~~~~~~~~~~~~~~~~~~~t~~~~~  233 (573)
T d1kb0a2         155 NTFEGQKGSLT-ITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSG  233 (573)
T ss_dssp             ETTTTCCSSCB-CCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGG
T ss_pred             cCccCCcceEE-eecceEEEeccEEEeeccccccccceEEEEecCCccceeeeeeccccCCCCCCcccccccccccCCCC
Confidence            21  11 1111 11111   45555532      24689999999999887653210                       


Q ss_pred             --------CCe-EEEEEecCCCEEEEecCC-------------------CeEEEeecCccceeeeeecCCCCCCCCcccc
Q psy10867        120 --------QPI-TIVKWSADSNFIVTGGED-------------------GTICVWQLSRLICKQTVAFGIPGSSGKGVTG  171 (343)
Q Consensus       120 --------~~v-~~~~~~~~~~~l~s~~~d-------------------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  171 (343)
                              +.+ ....+.++...++.+...                   ..|.-.|+++++.....+......       
T Consensus       234 ~~~~~~~G~~vW~~~s~D~~~g~~~~~~g~~~~~~~~~~~~~~g~~~~~~svvAld~~tG~~~W~~q~~~~d~-------  306 (573)
T d1kb0a2         234 KWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDN-------  306 (573)
T ss_dssp             CHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCC-------
T ss_pred             ceeecCCCCcccccceEchhhCeeeeccCCCccccccccccccccccccceEEEecccchheeecccccCccc-------
Confidence                    111 123444544444432211                   134445555554443322100000       


Q ss_pred             ccceeeeecccccceEEEEeecCCC-ceEEEEeeCCCeEEEEecCCCceEEEeecCC-----------------------
Q psy10867        172 LTEPLHVKSQHSLPVTHVTLSKLGA-KSRVASVSHDRTCKIFDLCTGEDLLSLILDT-----------------------  227 (343)
Q Consensus       172 ~~~~~~~~~~~~~~v~~~~~~~~~~-~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~-----------------------  227 (343)
                           .... ...+........++. ...++.++.+|.+.++|..+++.+.......                       
T Consensus       307 -----wd~d-~~~~~~l~~~~~~g~~~~~v~~~~k~G~l~~lDr~tGe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  380 (573)
T d1kb0a2         307 -----WDYT-STQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGS  380 (573)
T ss_dssp             -----SCCC-CCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTT
T ss_pred             -----cccc-ccceeeecceecCCCceeeeeeccccceeEEeccccccccccccccccccccccccccceeeeeeccccc
Confidence                 0000 011111222222221 1467788899999999999999876553110                       


Q ss_pred             -------------cEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccc-------------cCCCCCCccccccCc
Q psy10867        228 -------------RLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHI-------------QDSTSNPDFIGHEKQ  281 (343)
Q Consensus       228 -------------~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~  281 (343)
                                   .-...+++|+...+++...+....+......+.......             ....+  ....+.+.
T Consensus       381 ~~~~~~pg~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p--~~~~~~G~  458 (573)
T d1kb0a2         381 KPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEP--PKSKPFGR  458 (573)
T ss_dssp             SCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSC--CCSCCEEE
T ss_pred             cceEEeecccCCccccccccCCCcceEEeeccccceeeecccccccccCCCCccccccccccccccccCC--CCCCCccc
Confidence                         011246788888888766665554444332211000000             00000  00000011


Q ss_pred             EE-----------EE---------EEccCCCEEEEEeCCCcEEEEecccceeeeecccCCceEE--EEEccCCC
Q psy10867        282 VT-----------SL---------SCSITGITLLSSSADETLKIWHTISRQCLRTIQHKGPVLG--AFLGLLPP  333 (343)
Q Consensus       282 v~-----------~~---------~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~--~~~sp~~~  333 (343)
                      +.           ..         ..+-.+.++++|+.||.++.+|.++|+.+.+++....+..  +.|..+|+
T Consensus       459 l~AiD~~tGk~~W~~~~~~p~~gg~lstagglVF~G~~dg~l~A~Da~TGe~LW~~~~~~~~~~~P~ty~~~Gk  532 (573)
T d1kb0a2         459 LLAWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGR  532 (573)
T ss_dssp             EEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTE
T ss_pred             EEEeCCCCCceEeeecCCCCCCCceEEEcCCEEEEECCCCeEEEEECCCCcEeEEEECCCCccccCEEEEECCE
Confidence            11           11         1222567888899999999999999999999883333322  55666776

>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Pseudomonas putida, hk5 [TaxId: 303]

Probab=98.59  E-value=1.5e-05  Score=67.36  Aligned_cols=305  Identities=10%  Similarity=0.070  Sum_probs=161.2

Q ss_pred             ceEEEecCCCCeEEEEecCCceEEEEEecCCCC----------cceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceec
Q psy10867          5 NEVAFSYDGSGAISVWEPKGGTLLMSYKGASVL----------SPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLR   74 (343)
Q Consensus         5 ~~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~----------~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~   74 (343)
                      ...+|.++.++.|.-.|.++|+.+.++......          .-..++.. ++++++ +..++.+.-.|..+++.+...
T Consensus        66 ~g~vyv~t~~~~v~AlDa~tG~~lW~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~-~~~~g~l~Alda~tG~~~w~~  143 (560)
T d1kv9a2          66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALW-GDKVYV-GTLDGRLIALDAKTGKAIWSQ  143 (560)
T ss_dssp             TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEE-BTEEEE-ECTTSEEEEEETTTCCEEEEE
T ss_pred             CCEEEEECCCCeEEEEeCCCCCEEEEECCCCCccccccccccccccCccee-CCeEEE-EeCCCEEEEEECCCCcEEecc
Confidence            456777888899999999999999987532110          01112222 234444 444488888888888876433


Q ss_pred             ccCC-cceEEEEECC---CCCEEEEe------cCCeEEEEEccCCceEEEeccc--------------------------
Q psy10867         75 LICP-GRISSMQASP---DAAYIAVS------IETKLHMWQISSGRLLATASSH--------------------------  118 (343)
Q Consensus        75 ~~~~-~~v~~~~~s~---~~~~l~~~------~d~~i~v~~~~~~~~~~~~~~~--------------------------  118 (343)
                      .... ..-..+.-.|   ++..++..      ..|.|.-+|.++|+.+-++..-                          
T Consensus       144 ~~~~~~~~~~~~~~p~v~~~~vivg~~~~~~~~~G~v~a~D~~TG~~~W~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (560)
T d1kv9a2         144 QTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYW  223 (560)
T ss_dssp             ECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHH
T ss_pred             CccCcccceeeeeeeeeecCcccccccceeccccceEEEEECCCceEEeeeeeccccccCCccccccccccccccccccc
Confidence            2111 1111111111   44445432      2367999999999988776310                          


Q ss_pred             ----CCCe-EEEEEecCCCEEEEecC-------------------CCeEEEeecCccceeeeeecCCCCCCCCccccccc
Q psy10867        119 ----YQPI-TIVKWSADSNFIVTGGE-------------------DGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTE  174 (343)
Q Consensus       119 ----~~~v-~~~~~~~~~~~l~s~~~-------------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (343)
                          ...+ ..+.+.+...+++.+..                   ...|.-.|+++++.....+......-         
T Consensus       224 ~~~~G~~~W~~~s~D~~~~l~y~~tgn~~~~~~~~~~~~~g~n~~s~sivAld~~tG~~~W~~Q~~~~D~w---------  294 (560)
T d1kv9a2         224 KLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSW---------  294 (560)
T ss_dssp             HHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCS---------
T ss_pred             cccCCCCcccccccccccCeeeecCCCCcccccccccccCCccccceeeEEecCCccceeEEEeccccccc---------
Confidence                0111 12455565555554322                   23455566777665544331100000         


Q ss_pred             eeeeecccccceEEEEeecCCC-ceEEEEeeCCCeEEEEecCCCceEEEeecCCc-------------------------
Q psy10867        175 PLHVKSQHSLPVTHVTLSKLGA-KSRVASVSHDRTCKIFDLCTGEDLLSLILDTR-------------------------  228 (343)
Q Consensus       175 ~~~~~~~~~~~v~~~~~~~~~~-~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~-------------------------  228 (343)
                         .+ .......-+.+..++. ...++.+..+|.+.++|..+++.+........                         
T Consensus       295 ---d~-d~~~~~~l~~~~~~g~~~~~v~~~~k~G~~~~lDr~tG~~i~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  370 (560)
T d1kv9a2         295 ---DF-TATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEP  370 (560)
T ss_dssp             ---CC-CCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSC
T ss_pred             ---cc-cccceeeeeeeecCCceeeeeeecCccceEEEEecCCCcccccccccccccccccChhhccccccccccccccc
Confidence               00 0011111122222321 14677889999999999999998765532110                         


Q ss_pred             ------------EEEEEEcCCCCEEEEEcCCC------------------------------------cEEEEEeecccc
Q psy10867        229 ------------LTCVAFDGTEDNIYMGTSEG------------------------------------VIKSFCLRQVPR  260 (343)
Q Consensus       229 ------------i~~~~~~~~~~~l~~~~~d~------------------------------------~i~i~d~~~~~~  260 (343)
                                  -...+++|+...+++...+.                                    .|.-||+.+.+.
T Consensus       371 ~~~~p~~~Gg~~w~~~a~dp~~~~~yvp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~G~l~A~D~~tGk~  450 (560)
T d1kv9a2         371 IVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKA  450 (560)
T ss_dssp             EEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEE
T ss_pred             eeeeeccccccccccccccCCCCeeecccccccceeeccccccccccccccccCcccccCCCCcccccceEEEeCCCCeE
Confidence                        01345677776666654332                                    222222222221


Q ss_pred             cccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecccCCceE--EEEEccCCC-eee
Q psy10867        261 TRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQHKGPVL--GAFLGLLPP-AIH  336 (343)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~--~~~~sp~~~-~l~  336 (343)
                      ......            ..+..+=.+.-.+.+++.|+.||.++.+|.++|+.+.+++....+.  -+.+..+|+ ||+
T Consensus       451 ~W~~~~------------~~~~~gg~l~TagglVF~G~~dg~l~A~Da~tGe~LW~~~l~~~~~~~P~ty~~dGkqyv~  517 (560)
T d1kv9a2         451 AWKVPY------------PTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFELAGRQYVA  517 (560)
T ss_dssp             EEEEEE------------SSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred             eeeccC------------CCCCCCceeEECCCEEEEECCCCcEEEEECCCCcEeEEEECCCCccccCEEEEECCEEEEE
Confidence            111100            0000000122245678889999999999999999999988333332  255666775 444

>d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Clathrin heavy-chain terminal domain
family: Clathrin heavy-chain terminal domain
domain: Clathrin heavy-chain terminal domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.41  E-value=0.00015  Score=54.26  Aligned_cols=217  Identities=10%  Similarity=0.148  Sum_probs=140.1

Q ss_pred             CCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEE
Q psy10867         14 SGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYI   93 (343)
Q Consensus        14 dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l   93 (343)
                      ...|.|-|+.......+-.-    .--+.-.+|..+++|.-.. .++.++|+++.+.++...- ..+|.--.|- +.+.|
T Consensus        44 ~~~VvIidl~n~~~~~Rrpi----~AdsAIMhP~~~IiALrag-~~LQiFnletK~klks~~~-~e~VvfWkWi-s~~~L  116 (327)
T d1utca2          44 QAQVVIIDMNDPSNPIRRPI----SADSAIMNPASKVIALKAG-KTLQIFNIEMKSKMKAHTM-TDDVTFWKWI-SLNTV  116 (327)
T ss_dssp             EEEEEEEETTSTTSCEEEEC----CCSEEEECSSSSEEEEEET-TEEEEEETTTTEEEEEEEC-SSCCCEEEES-SSSEE
T ss_pred             CceEEEEECCCCCcceeccc----chhhhhcCCCCcEEEEecC-CeEEEEehhHhhhhceEEc-CCCcEEEEec-CCCEE
Confidence            45666777665432221111    1124456799999988776 7999999999988865533 4466666776 44566


Q ss_pred             EEecCCeEEEEEccCC-ceEEEecccC----CCeEEEEEecCCCEEEEec-------CCCeEEEeecCccceeeeeecCC
Q psy10867         94 AVSIETKLHMWQISSG-RLLATASSHY----QPITIVKWSADSNFIVTGG-------EDGTICVWQLSRLICKQTVAFGI  161 (343)
Q Consensus        94 ~~~~d~~i~v~~~~~~-~~~~~~~~~~----~~v~~~~~~~~~~~l~s~~-------~dg~i~iwd~~~~~~~~~~~~~~  161 (343)
                      +--.+..|+-|+++.. .+.+.+..|.    ..|..-..+++.++++..+       -.|.+.+|..+..          
T Consensus       117 ~lVT~taVYHW~~~g~s~P~k~fdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~i~G~mQLYS~er~----------  186 (327)
T d1utca2         117 ALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK----------  186 (327)
T ss_dssp             EEECSSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT----------
T ss_pred             EEEcCCceEEEcccCCCCchhhhhhcccccCceEEEEEECCCCCEEEEEeEecCCCceeEEEEEEEeccC----------
Confidence            6666888999999543 4666666553    3566666678888776543       2467888888775          


Q ss_pred             CCCCCCccccccceeeeecccccceEEEEeecCCCc-eEEEEee---CCCeEEEEecCCCc---e---EEE--eec----
Q psy10867        162 PGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAK-SRVASVS---HDRTCKIFDLCTGE---D---LLS--LIL----  225 (343)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~l~~~~---~d~~i~~wd~~~~~---~---~~~--~~~----  225 (343)
                                   .-+.+++|......+.+..+... .+++.+.   ..+.+++-++....   .   .+.  +..    
T Consensus       187 -------------~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~~~kLhIiEig~~~~g~~~f~kk~vdi~fppea  253 (327)
T d1utca2         187 -------------VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEA  253 (327)
T ss_dssp             -------------EEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSCCCTTCCCCCCEEEECCCCTTC
T ss_pred             -------------cCccccceeeeeEEEEcCCCCCCceEEEEEECCCCCcEEEEEEcCCCccCCCCCcceeEEEECCccc
Confidence                         55667778766666555432211 2333332   23688888886522   1   111  111    


Q ss_pred             -CCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccc
Q psy10867        226 -DTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPR  260 (343)
Q Consensus       226 -~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~  260 (343)
                       ..-..++..++....++.-+.-|.|++||+.+...
T Consensus       254 ~~DFPvamqvs~kygiiyviTK~G~i~lyDleTgt~  289 (327)
T d1utca2         254 QNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTC  289 (327)
T ss_dssp             TTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCE
T ss_pred             cCCcEEEEEeeccCCEEEEEecCcEEEEEEcccccE
Confidence             22367888999999999999999999999988543

>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Ethanol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.41  E-value=0.00039  Score=58.86  Aligned_cols=109  Identities=11%  Similarity=0.065  Sum_probs=62.1

Q ss_pred             ceEEEecCCCCeEEEEecCCceEEEEEecCCCC--------cceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecc-
Q psy10867          5 NEVAFSYDGSGAISVWEPKGGTLLMSYKGASVL--------SPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRL-   75 (343)
Q Consensus         5 ~~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~--------~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~-   75 (343)
                      ..++|.++.++.|.-.|..+|+.+.++......        .-+.+++. ++++++... ++.+.-.|..+++.+.... 
T Consensus        68 ~g~vy~~t~~~~v~AlDa~TG~~lW~~~~~~~~~~~~~~~~~~rg~a~~-~~~i~~~t~-~~~l~alda~tG~~~W~~~~  145 (582)
T d1flga_          68 DGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIY-GDKVFFGTL-DASVVALNKNTGKVVWKKKF  145 (582)
T ss_dssp             TTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEE-TTEEEEEET-TTEEEEEESSSCCEEEEEEC
T ss_pred             CCEEEEeCCCCeEEEEeCCCCCeEEEEcCCCCCccccccccccCCceEe-CCceEEecC-CCeEEEecccccceeeeecc
Confidence            457888888999999999999999987543110        11223333 345555444 4788888988887662211 


Q ss_pred             -cCC------cceEEEEECCCCCEEE-Ee-------cCCeEEEEEccCCceEEEe
Q psy10867         76 -ICP------GRISSMQASPDAAYIA-VS-------IETKLHMWQISSGRLLATA  115 (343)
Q Consensus        76 -~~~------~~v~~~~~s~~~~~l~-~~-------~d~~i~v~~~~~~~~~~~~  115 (343)
                       .+.      ..-....--..+..++ .+       ..+.|.-+|.++|+.+-++
T Consensus       146 ~~~~~~~~~~~~p~~~~~~~~~~~~~i~g~~~~~~~~~g~v~a~d~~tG~~~W~~  200 (582)
T d1flga_         146 ADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMR  200 (582)
T ss_dssp             SCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEE
T ss_pred             cCCCccceeecCceEecCCcEeEEEEEeCccccccccccceEEecCCCCcEEEEE
Confidence             110      0000011001123333 21       2457888898888877655

>d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Clathrin heavy-chain terminal domain
family: Clathrin heavy-chain terminal domain
domain: Clathrin heavy-chain terminal domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.37  E-value=0.00019  Score=53.67  Aligned_cols=218  Identities=9%  Similarity=0.115  Sum_probs=138.6

Q ss_pred             CCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcc-cceecccC----CcceEEEEECC
Q psy10867         14 SGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQE-KAQLRLIC----PGRISSMQASP   88 (343)
Q Consensus        14 dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~-~~~~~~~~----~~~v~~~~~s~   88 (343)
                      ...+.|+|+++.+.++.+.-.+  .|.--.|-.+..+.....  ..|.-|+++... +.+.+..|    ...|..-..++
T Consensus        82 g~~LQiFnletK~klks~~~~e--~VvfWkWis~~~L~lVT~--taVYHW~~~g~s~P~k~fdR~~~L~~~QIInY~~d~  157 (327)
T d1utca2          82 GKTLQIFNIEMKSKMKAHTMTD--DVTFWKWISLNTVALVTD--NAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDA  157 (327)
T ss_dssp             TTEEEEEETTTTEEEEEEECSS--CCCEEEESSSSEEEEECS--SEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECT
T ss_pred             CCeEEEEehhHhhhhceEEcCC--CcEEEEecCCCEEEEEcC--CceEEEcccCCCCchhhhhhcccccCceEEEEEECC
Confidence            3579999999999999998887  566667766655555544  479999996533 33444333    34688888899


Q ss_pred             CCCEEEE-e---c----CCeEEEEEccCCceEEEecccCCCeEEEEEecC--C-CEEEEe---cCCCeEEEeecCccce-
Q psy10867         89 DAAYIAV-S---I----ETKLHMWQISSGRLLATASSHYQPITIVKWSAD--S-NFIVTG---GEDGTICVWQLSRLIC-  153 (343)
Q Consensus        89 ~~~~l~~-~---~----d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~--~-~~l~s~---~~dg~i~iwd~~~~~~-  153 (343)
                      +.++++. |   .    .|.+.+|..+. +..+.+++|.+....+.+..+  . +.++.+   ...+++.+-++..... 
T Consensus       158 ~~kW~~l~GI~~~~~~i~G~mQLYS~er-~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~~~kLhIiEig~~~~g  236 (327)
T d1utca2         158 KQKWLLLTGISAQQNRVVGAMQLYSVDR-KVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTG  236 (327)
T ss_dssp             TSCEEEEEEEEEETTEEEEEEEEEETTT-TEEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSCCCTT
T ss_pred             CCCEEEEEeEecCCCceeEEEEEEEecc-CcCccccceeeeeEEEEcCCCCCCceEEEEEECCCCCcEEEEEEcCCCccC
Confidence            9998884 2   2    35799999764 455677787654444433211  1 122222   2336777777765311 


Q ss_pred             eeeeecCCCCCCCCccccccceeee---ecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeec-CCcE
Q psy10867        154 KQTVAFGIPGSSGKGVTGLTEPLHV---KSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLIL-DTRL  229 (343)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~-~~~i  229 (343)
                      ...+.              .+....   .....+..-++.+++..  ..+..-+.-|.+.+||++++.++..-+. ...|
T Consensus       237 ~~~f~--------------kk~vdi~fppea~~DFPvamqvs~ky--giiyviTK~G~i~lyDleTgt~i~~nRIs~~~i  300 (327)
T d1utca2         237 NQPFP--------------KKAVDVFFPPEAQNDFPVAMQISEKH--DVVFLITKYGYIHLYDLETGTCIYMNRISGETI  300 (327)
T ss_dssp             CCCCC--------------CEEEECCCCTTCTTCCEEEEEEETTT--TEEEEEETTSEEEEEETTTCCEEEEEECCSSCE
T ss_pred             CCCCc--------------ceeEEEECCccccCCcEEEEEeeccC--CEEEEEecCcEEEEEEcccccEEEEeecCCCce
Confidence            01000              011111   11224556688888877  6888999999999999999999887773 5556


Q ss_pred             EEEEEcCCCCEEEEEcCCCcEEE
Q psy10867        230 TCVAFDGTEDNIYMGTSEGVIKS  252 (343)
Q Consensus       230 ~~~~~~~~~~~l~~~~~d~~i~i  252 (343)
                      -..+-+.+..-+++-..+|.|..
T Consensus       301 F~~a~~~~~~Gi~~VNr~GqVl~  323 (327)
T d1utca2         301 FVTAPHEATAGIIGVNRKGQVLS  323 (327)
T ss_dssp             EEEEEETTTTEEEEEETTSEEEE
T ss_pred             EEeccCCCCceEEEECCCCeEEE
Confidence            55555555555555556776643

>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Nidogen
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.34  E-value=0.00024  Score=53.37  Aligned_cols=246  Identities=8%  Similarity=-0.032  Sum_probs=147.2

Q ss_pred             eEEEEEcCCCeEEEEeCCCcccc-----eecccCCcceEEEEECCCCCEEEE--ecCCeEEEEEccCCceEEEecccCCC
Q psy10867         49 YVLGVEKGKPMIQAWPVNSQEKA-----QLRLICPGRISSMQASPDAAYIAV--SIETKLHMWQISSGRLLATASSHYQP  121 (343)
Q Consensus        49 ~~~~~~~~~~~i~iw~~~~~~~~-----~~~~~~~~~v~~~~~s~~~~~l~~--~~d~~i~v~~~~~~~~~~~~~~~~~~  121 (343)
                      .+|..+.. +.|+-.+++.....     ..+..+...+..++|.+..+.|.-  ...+.|+..+++.+.....+......
T Consensus         2 ~fLl~s~~-~~I~~~~ld~~~~~~~~~~~~~~~~~~~~~~ld~D~~~~~iywsd~~~~~I~~~~l~g~~~~~v~~~~~~~   80 (263)
T d1npea_           2 THLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGS   80 (263)
T ss_dssp             EEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCC
T ss_pred             CEEEEeCC-CeEEEEECCCccccccccccccccCCCcEEEEEEEeCCCEEEEEECCCCeEEEEEcccCCcEEEEEecccc
Confidence            34444544 56777776544322     112233445778999887766664  35678999998766655555444457


Q ss_pred             eEEEEEecCCCEEE-EecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEE
Q psy10867        122 ITIVKWSADSNFIV-TGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRV  200 (343)
Q Consensus       122 v~~~~~~~~~~~l~-s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l  200 (343)
                      +.++++..-+..|+ +-...+.|.+.++......                      .........+..++++|... .++
T Consensus        81 p~~iAvD~~~~~lY~~d~~~~~I~~~~~dg~~~~----------------------~l~~~~l~~p~~l~vdp~~g-~ly  137 (263)
T d1npea_          81 PEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRR----------------------VLFDTGLVNPRGIVTDPVRG-NLY  137 (263)
T ss_dssp             EEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE----------------------EEECSSCSSEEEEEEETTTT-EEE
T ss_pred             ccEEEEeccCCeEEEeccCCCEEEEEecCCceEE----------------------EEecccccCCcEEEEecccC-cEE
Confidence            88999987555554 5556778999998764321                      11122335678999998763 333


Q ss_pred             EEeeC--CCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCCEEEEE-cCCCcEEEEEeecccccccccccCCCCCCccc
Q psy10867        201 ASVSH--DRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIYMG-TSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFI  276 (343)
Q Consensus       201 ~~~~~--d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~  276 (343)
                      .+-..  ...|..-++.......... .-.....+++++.++.|+.. ...+.|...++.......           .+.
T Consensus       138 ~t~~~~~~~~I~r~~~dG~~~~~i~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~~g~~~~~-----------v~~  206 (263)
T d1npea_         138 WTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRK-----------VLE  206 (263)
T ss_dssp             EEECCSSSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEE-----------EEE
T ss_pred             EeecCCCCcEEEEecCCCCCceeeeeecccccceEEEeecCcEEEEEeCCCCEEEEEECCCCCeEE-----------EEC
Confidence            33222  2335444554333322222 23457899999988888766 457788888887643321           112


Q ss_pred             cccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc--cCCceEEEEEccC
Q psy10867        277 GHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ--HKGPVLGAFLGLL  331 (343)
Q Consensus       277 ~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~--~~~~v~~~~~sp~  331 (343)
                      +- ....+|++. ++.+..+-...+.|...|..+++.+..+.  .......++..++
T Consensus       207 ~~-~~P~~lav~-~~~lYwtd~~~~~I~~~~~~~g~~~~~~~~~~~~~~~gi~v~~~  261 (263)
T d1npea_         207 GL-QYPFAVTSY-GKNLYYTDWKTNSVIAMDLAISKEMDTFHPHKQTRLYGITIALS  261 (263)
T ss_dssp             CC-CSEEEEEEE-TTEEEEEETTTTEEEEEETTTTEEEEEECCSSCCCCCCEEEECS
T ss_pred             CC-CCcEEEEEE-CCEEEEEECCCCEEEEEECCCCccceEECCCCCCCcceEEEeCC
Confidence            21 234577775 34444555567889999998888877664  3334445555443

>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=98.32  E-value=0.00032  Score=59.11  Aligned_cols=258  Identities=9%  Similarity=0.003  Sum_probs=143.8

Q ss_pred             eEEEecCCCCeEEEEecCCceEEEEEecCCC---CcceEEEEeCCceEEEEEc-----CCCeEEEEeCCCcccceecccC
Q psy10867          6 EVAFSYDGSGAISVWEPKGGTLLMSYKGASV---LSPHSMCLLGNDYVLGVEK-----GKPMIQAWPVNSQEKAQLRLIC   77 (343)
Q Consensus         6 ~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~~~~~~-----~~~~i~iw~~~~~~~~~~~~~~   77 (343)
                      ..+|-++.+|.+.--|.++|+.+........   ..++.--.-.++.+++...     .+|.|.-+|+.+++.+......
T Consensus       116 ~~i~~~~~~g~l~alda~tG~~~w~~~~~~~~~~~~~t~~p~v~~~~vivg~~~~~~~~~G~v~a~D~~TG~~~W~~~t~  195 (571)
T d2ad6a1         116 GQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFAT  195 (571)
T ss_dssp             TEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESS
T ss_pred             CeEEEEeCCCcEEeeehhhhhhhccccccccccccceeecCeEeCCeEEEeeccccccccCcEEEEECCCCcEEEEEecc
Confidence            3456677789999999999999877654321   0222111112456665554     2478999999999877432111


Q ss_pred             -------------------------------------Ccce-EEEEECCCCCEEEE--ec---------------CCeEE
Q psy10867         78 -------------------------------------PGRI-SSMQASPDAAYIAV--SI---------------ETKLH  102 (343)
Q Consensus        78 -------------------------------------~~~v-~~~~~s~~~~~l~~--~~---------------d~~i~  102 (343)
                                                           ...+ ...++.++..++..  +.               ...+.
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gg~vW~~~s~D~~~g~~y~~tg~~~p~~~~~r~g~n~~s~svv  275 (571)
T d2ad6a1         196 GSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIW  275 (571)
T ss_dssp             SCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEE
T ss_pred             CCcccccccccccccccccCcccccccccCCcccccCCCccccccccchhcCeeeeecccccCcccccccccccccccee
Confidence                                                 0111 12344455444443  21               24688


Q ss_pred             EEEccCCceEEEecccCCC---------eEEEEEecCCC---EEEEecCCCeEEEeecCccceeeeeecCCCCCC-----
Q psy10867        103 MWQISSGRLLATASSHYQP---------ITIVKWSADSN---FIVTGGEDGTICVWQLSRLICKQTVAFGIPGSS-----  165 (343)
Q Consensus       103 v~~~~~~~~~~~~~~~~~~---------v~~~~~~~~~~---~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-----  165 (343)
                      -.|+++|+.+-.++.....         ........+++   .++.++.+|.+.++|..+++.+...........     
T Consensus       276 Ald~~TG~~~W~~q~~~~D~Wd~D~~~~~~l~~~~~~g~~~~~v~~~~k~G~l~vlDr~tG~~i~~~~~~~~~~~~~~~~  355 (571)
T d2ad6a1         276 GRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVD  355 (571)
T ss_dssp             EEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEEC
T ss_pred             eeeccchhheecccccCccccccccccccceeeeeccCccccceeeccccceEEEEecCCCcEeeeeccCCccccccccc
Confidence            8899999988777643221         12222233443   567788999999999999987654332211000     


Q ss_pred             ---CCcc------c-cccceeeeecccccce--EEEEeecCCCceEEEEe------------------------------
Q psy10867        166 ---GKGV------T-GLTEPLHVKSQHSLPV--THVTLSKLGAKSRVASV------------------------------  203 (343)
Q Consensus       166 ---~~~~------~-~~~~~~~~~~~~~~~v--~~~~~~~~~~~~~l~~~------------------------------  203 (343)
                         ....      . ...+.........+..  ...+++|+.  .+++..                              
T Consensus       356 ~~~~~~i~~~~~~~~~~~~g~~~~p~~~Gg~~w~~~a~dP~~--~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  433 (571)
T d2ad6a1         356 LKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPES--RTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYP  433 (571)
T ss_dssp             TTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTT--TEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEE
T ss_pred             ccccccccCcccccccccCceEEEeccccccccccceECCCC--ceEEEeccccccccccccccccCCccccccceeecc
Confidence               0000      0 0000000100000000  113344433  222211                              


Q ss_pred             -------eCCCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeeccccccccc
Q psy10867        204 -------SHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHH  265 (343)
Q Consensus       204 -------~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~  265 (343)
                             ...|.|.-+|+.+++.+.+.....+..+-.....+.++++|+.||.++.+|.++++...++.
T Consensus       434 ~~~~~~~~~~G~l~AiD~~TG~~~W~~~~~~~~~~g~l~TagglVf~G~~dg~l~A~Da~tGe~lW~~~  502 (571)
T d2ad6a1         434 GPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFK  502 (571)
T ss_dssp             CTTSTTSCCCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred             ccCCcccCCcccEEEeccCCCceeeEcCCCCCCCcceeEecCCEEEEECCCCeEEEEECCCCcEEEEEE
Confidence                   11267889999999999888765443322233357788899999999999999988776553

>d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Paracoccus denitrificans [TaxId: 266]

Probab=98.29  E-value=0.00036  Score=55.11  Aligned_cols=194  Identities=10%  Similarity=0.105  Sum_probs=119.1

Q ss_pred             ecCCeEEEEEccCCceEEEeccc---------------------------------------CCCe--EEEEEec---CC
Q psy10867         96 SIETKLHMWQISSGRLLATASSH---------------------------------------YQPI--TIVKWSA---DS  131 (343)
Q Consensus        96 ~~d~~i~v~~~~~~~~~~~~~~~---------------------------------------~~~v--~~~~~~~---~~  131 (343)
                      |..|.|+|+-+.+++.+..+.-.                                       .+..  ..+.+..   ||
T Consensus        20 G~sG~v~v~G~PSmR~l~~ipvF~~~~~~G~G~~~es~~il~~~~~~~t~~~l~~~g~~~~~~GD~HHP~~S~TdGtyDG   99 (459)
T d1fwxa2          20 GQSGEMRILGIPSMRELMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAANGKRIHDNGDLHHVHMSFTEGKYDG   99 (459)
T ss_dssp             BTTCEEEEEEETTCCEEEEEESSSCCTTTCTTTBHHHHHHHHTTCC--------------CCCCCBCCEEEEEETTEEEE
T ss_pred             CccceEEEEecCCcceEEEeeeecCCCCcccCcchhHHHHhhcccChhhhhhhhccCcccccCCCcCCCcccccCCccce
Confidence            57889999999888877665200                                       0111  1344432   78


Q ss_pred             CEEEEec-CCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCC----
Q psy10867        132 NFIVTGG-EDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHD----  206 (343)
Q Consensus       132 ~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d----  206 (343)
                      ++++... .+..|.+-|+++.++.+.+..                     .....+..++..++++..+++.++.+    
T Consensus       100 rylFVNDkan~RVAvIdl~~fkt~kIi~i---------------------Pn~~~~HG~r~~~~p~T~YV~~~~e~~vP~  158 (459)
T d1fwxa2         100 RFLFMNDKANTRVARVRCDVMKCDAILEI---------------------PNAKGIHGLRPQKWPRSNYVFCNGEDETPL  158 (459)
T ss_dssp             EEEEEEETTTTEEEEEETTTTEEEEEEEC---------------------SSCCSEEEEEECCSSBCSEEEEEECSCEES
T ss_pred             eEEEEEcCCCceEEEEECcceeeeEEEec---------------------CCCCCCceeecccCCCeEEEEccCcccccc
Confidence            8777765 578999999999876553321                     12334455555444332566665553    


Q ss_pred             --------------CeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcCCC---------------cEEEEEeec
Q psy10867        207 --------------RTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEG---------------VIKSFCLRQ  257 (343)
Q Consensus       207 --------------~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~---------------~i~i~d~~~  257 (343)
                                    +.+.++|..+.+....+........+.++++|+++++.+.+.               .+.+++...
T Consensus       159 pndg~~l~d~~~y~~~~t~ID~~tm~V~~QV~V~g~ld~~~~s~dGK~af~TsyNSE~g~~l~e~ta~e~D~i~V~n~~r  238 (459)
T d1fwxa2         159 VNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAE  238 (459)
T ss_dssp             SCSSSSTTCGG-EEEEEEEEETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHH
T ss_pred             CCCCccccchhhcceEEEEEecCCceEEEEeeeCCChhccccCCCCCEEEEEeccccCCcchhhcccccceEEEEechHH
Confidence                          346788999999988888888888999999999999876432               244444422


Q ss_pred             cccc------------cccccc--CCCCCCccccccCcEEEEEEccCCCEEEEE-eCCCcEEEEeccc
Q psy10867        258 VPRT------------RDHHIQ--DSTSNPDFIGHEKQVTSLSCSITGITLLSS-SADETLKIWHTIS  310 (343)
Q Consensus       258 ~~~~------------~~~~~~--~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~-~~dg~i~iwd~~~  310 (343)
                      ....            ......  .......+..-......+.++|||++++++ ..+.++-++|++.
T Consensus       239 ie~av~~Gk~~eingV~VVD~~~~~~~~v~~yIPVpKsPHGV~vSPDGKyi~VaGKLs~tVSViD~~K  306 (459)
T d1fwxa2         239 IEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTR  306 (459)
T ss_dssp             HHHHHHHTCSEEETTEEEEECSGG--CSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGG
T ss_pred             hHHhhhcCCcEEeCCceeecccccCCcceeEEEecCCCCCceEECCCCCEEEEeCCcCCcEEEEEehh
Confidence            1100            000000  000111111222345678999999988755 5688999999864

>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Pseudomonas putida, hk5 [TaxId: 303]

Probab=98.20  E-value=0.0011  Score=55.59  Aligned_cols=258  Identities=13%  Similarity=0.109  Sum_probs=145.6

Q ss_pred             eEEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeC---CceEEEEEcC-----CCeEEEEeCCCcccceeccc-
Q psy10867          6 EVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLG---NDYVLGVEKG-----KPMIQAWPVNSQEKAQLRLI-   76 (343)
Q Consensus         6 ~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~~~~~~~-----~~~i~iw~~~~~~~~~~~~~-   76 (343)
                      ..+|-++.++.|.-.|..+|+.+..+..........+.-.|   ++.+++....     .|.|.-+|.++++.+-.+.. 
T Consensus       118 ~~v~~~~~~g~l~Alda~tG~~~w~~~~~~~~~~~~~~~~p~v~~~~vivg~~~~~~~~~G~v~a~D~~TG~~~W~~~t~  197 (560)
T d1kv9a2         118 DKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTV  197 (560)
T ss_dssp             TEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESS
T ss_pred             CeEEEEeCCCEEEEEECCCCcEEeccCccCcccceeeeeeeeeecCcccccccceeccccceEEEEECCCceEEeeeeec
Confidence            34677777899999999999999887754321112222222   4555554322     26799999999987733221 


Q ss_pred             --C---------------------------CcceE-EEEECCCCCEEEE--ec------------------CCeEEEEEc
Q psy10867         77 --C---------------------------PGRIS-SMQASPDAAYIAV--SI------------------ETKLHMWQI  106 (343)
Q Consensus        77 --~---------------------------~~~v~-~~~~s~~~~~l~~--~~------------------d~~i~v~~~  106 (343)
                        .                           ...+. .+.+.++..++..  +.                  ...|.-.|+
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~s~D~~~~l~y~~tgn~~~~~~~~~~~~~g~n~~s~sivAld~  277 (560)
T d1kv9a2         198 PGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRP  277 (560)
T ss_dssp             CCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECT
T ss_pred             cccccCCccccccccccccccccccccccCCCCcccccccccccCeeeecCCCCcccccccccccCCccccceeeEEecC
Confidence              0                           00111 1344455554442  10                  235778899


Q ss_pred             cCCceEEEecccCCCe---------EEEEEecCC---CEEEEecCCCeEEEeecCccceeeeeecCCCCCC-------CC
Q psy10867        107 SSGRLLATASSHYQPI---------TIVKWSADS---NFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSS-------GK  167 (343)
Q Consensus       107 ~~~~~~~~~~~~~~~v---------~~~~~~~~~---~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-------~~  167 (343)
                      ++++....++.....+         .-+....++   +.++.++.+|.+.++|..+++.+...........       ..
T Consensus       278 ~tG~~~W~~Q~~~~D~wd~d~~~~~~l~~~~~~g~~~~~v~~~~k~G~~~~lDr~tG~~i~~~~~~~~~~~~~~d~~~~~  357 (560)
T d1kv9a2         278 DTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGR  357 (560)
T ss_dssp             TTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCC
T ss_pred             CccceeEEEeccccccccccccceeeeeeeecCCceeeeeeecCccceEEEEecCCCcccccccccccccccccChhhcc
Confidence            9998876665322211         112222234   3677788999999999999987765543211100       00


Q ss_pred             c-----cccccceeeeecccccc--eEEEEeecCCCceEEEEe------------------------------------e
Q psy10867        168 G-----VTGLTEPLHVKSQHSLP--VTHVTLSKLGAKSRVASV------------------------------------S  204 (343)
Q Consensus       168 ~-----~~~~~~~~~~~~~~~~~--v~~~~~~~~~~~~~l~~~------------------------------------~  204 (343)
                      .     .....+.........+.  -...+++|+.  .+++..                                    .
T Consensus       358 ~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~--~~~yvp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~  435 (560)
T d1kv9a2         358 PVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGT--GLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAV  435 (560)
T ss_dssp             EEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTT--TEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGG
T ss_pred             ccccccccccccceeeeeccccccccccccccCCC--CeeecccccccceeeccccccccccccccccCcccccCCCCcc
Confidence            0     00000000000000000  0123334433  222211                                    1


Q ss_pred             CCCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeeccccccccc
Q psy10867        205 HDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHH  265 (343)
Q Consensus       205 ~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~  265 (343)
                      ..|.|.-+|+.+++.+.++....+...-.+.-.+.++++|+.||.++.+|.++++.+.++.
T Consensus       436 ~~G~l~A~D~~tGk~~W~~~~~~~~~gg~l~TagglVF~G~~dg~l~A~Da~tGe~LW~~~  496 (560)
T d1kv9a2         436 VSGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFE  496 (560)
T ss_dssp             CEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred             cccceEEEeCCCCeEeeeccCCCCCCCceeEECCCEEEEECCCCcEEEEECCCCcEeEEEE
Confidence            1367889999999999988866554433344457889999999999999999988876654

>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Galactose oxidase, central domain
family: Galactose oxidase, central domain
domain: Galactose oxidase, central domain
species: Fungi (Fusarium sp.) [TaxId: 29916]

Probab=98.12  E-value=0.0012  Score=52.60  Aligned_cols=136  Identities=9%  Similarity=0.000  Sum_probs=81.2

Q ss_pred             eEEEEecCCceEEE--EEec-CCCCcceEEEEeCCceEEEEEcCC-CeEEEEeCCCcccceecc-cCCcceEEEEECCCC
Q psy10867         16 AISVWEPKGGTLLM--SYKG-ASVLSPHSMCLLGNDYVLGVEKGK-PMIQAWPVNSQEKAQLRL-ICPGRISSMQASPDA   90 (343)
Q Consensus        16 ~i~iwd~~~~~~~~--~~~~-~~~~~v~~~~~~~~~~~~~~~~~~-~~i~iw~~~~~~~~~~~~-~~~~~v~~~~~s~~~   90 (343)
                      .+.+||..+++-..  .... +.. .....++.+++++++.|..+ ..+.+||..+........ .....-...+..+||
T Consensus        53 ~~~~yd~~t~~w~~~~~~~~~~~~-~~~~~~~~~~g~i~v~Gg~~~~~~~~yd~~~~~w~~~~~~~~~r~~~~~~~~~dG  131 (387)
T d1k3ia3          53 LTSSWDPSTGIVSDRTVTVTKHDM-FCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDG  131 (387)
T ss_dssp             EEEEECTTTCCBCCCEEEECSCCC-SSCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTS
T ss_pred             EEEEEECCCCcEeecCCCCCCccc-ceeEEEEecCCcEEEeecCCCcceeEecCccCcccccccccccccccceeeecCC
Confidence            36789988765322  2222 222 34566788999988887543 589999988766543221 111223456677899


Q ss_pred             CEEEEe-cC------CeEEEEEccCCceEEEecc---------cC-----CCeEEEEEecCCCEEEEecCCCeEEEeecC
Q psy10867         91 AYIAVS-IE------TKLHMWQISSGRLLATASS---------HY-----QPITIVKWSADSNFIVTGGEDGTICVWQLS  149 (343)
Q Consensus        91 ~~l~~~-~d------~~i~v~~~~~~~~~~~~~~---------~~-----~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~  149 (343)
                      ++++.+ .+      ..+.+||+.+.+-...-..         +.     +.-..+...++++.++.+...+.+.+++..
T Consensus       132 ~v~v~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~g~~~~~~~~~~~~  211 (387)
T d1k3ia3         132 RVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSG  211 (387)
T ss_dssp             CEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECST
T ss_pred             ceeeeccccccccccceeeeecCCCCceeecCCCcccccccccccceeeccceeEEEEeCCCCEEEecCcCCcEEecCcc
Confidence            988873 21      3689999987754321110         00     001112234577777777777777777776


Q ss_pred             ccc
Q psy10867        150 RLI  152 (343)
Q Consensus       150 ~~~  152 (343)
                      +..
T Consensus       212 ~~~  214 (387)
T d1k3ia3         212 SGD  214 (387)
T ss_dssp             TCE
T ss_pred             cCc
Confidence            653

>d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Low density lipoprotein (LDL) receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.07  E-value=0.001  Score=50.03  Aligned_cols=227  Identities=10%  Similarity=-0.040  Sum_probs=135.4

Q ss_pred             CeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE--ecCCeEEEEEccCCc----eEEEecccCCCeEEEEEecCC
Q psy10867         58 PMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV--SIETKLHMWQISSGR----LLATASSHYQPITIVKWSADS  131 (343)
Q Consensus        58 ~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~--~~d~~i~v~~~~~~~----~~~~~~~~~~~v~~~~~~~~~  131 (343)
                      ..|+-.++++.+..... .....+..++|.+..+.|.-  ...+.|.-.++....    ....+......+..+++.+.+
T Consensus        10 ~~I~~~~l~~~~~~~~~-~~~~~~~~id~d~~~~~lYw~D~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~p~glAvD~~~   88 (266)
T d1ijqa1          10 HEVRKMTLDRSEYTSLI-PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIH   88 (266)
T ss_dssp             SSEEEEETTSCCCEEEE-CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTT
T ss_pred             CeEEEEECCCCcceeee-CCCCceEEEEEEeCCCEEEEEECCCCEEEEEEecCCCCCcceEEEEeCCCCCcceEEEeecc
Confidence            46888898876654443 44556789999987776664  356677777765321    122233333456788888755


Q ss_pred             CEEE-EecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEe-eCCCeE
Q psy10867        132 NFIV-TGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASV-SHDRTC  209 (343)
Q Consensus       132 ~~l~-s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~-~~d~~i  209 (343)
                      ..|. +-...+.|.+.++......                      ............++++|... .++.+. +..+.|
T Consensus        89 ~~lY~~d~~~~~I~v~~~~g~~~~----------------------~~~~~~~~~P~~l~vd~~~g-~ly~~~~~~~~~I  145 (266)
T d1ijqa1          89 SNIYWTDSVLGTVSVADTKGVKRK----------------------TLFRENGSKPRAIVVDPVHG-FMYWTDWGTPAKI  145 (266)
T ss_dssp             TEEEEEETTTTEEEEEETTSSSEE----------------------EEEECTTCCEEEEEEETTTT-EEEEEECSSSCEE
T ss_pred             ceEEEEecCCCEEEeEecCCceEE----------------------EEEcCCCCCcceEEEEcccC-eEEEeccCCCcce
Confidence            5444 4456678999998765321                      22233445678899998652 333332 334567


Q ss_pred             EEEecCCCceEEEee-cCCcEEEEEEcCCCCEEEEE-cCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEE
Q psy10867        210 KIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIYMG-TSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSC  287 (343)
Q Consensus       210 ~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  287 (343)
                      ...++.......... .-.....+++++.++.|+.+ ...+.|...++.......         +...........++++
T Consensus       146 ~r~~~dGs~~~~l~~~~~~~p~gl~iD~~~~~lYw~d~~~~~I~~~~~dG~~~~~---------~~~~~~~~~~p~~lav  216 (266)
T d1ijqa1         146 KKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKT---------ILEDEKRLAHPFSLAV  216 (266)
T ss_dssp             EEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE---------EEECTTTTSSEEEEEE
T ss_pred             eEeccCCCceecccccccceeeEEEeeccccEEEEecCCcCEEEEEECCCCCEEE---------EEeCCCcccccEEEEE
Confidence            777765443333222 23457899999988877776 556788888876533211         1111112234567777


Q ss_pred             ccCCCEEEEEeCCCcEEEEecccceeeeecc
Q psy10867        288 SITGITLLSSSADETLKIWHTISRQCLRTIQ  318 (343)
Q Consensus       288 s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~  318 (343)
                      . ++.+..+-..++.|+..+..+++....+.
T Consensus       217 ~-~~~ly~td~~~~~I~~~~~~~g~~~~~~~  246 (266)
T d1ijqa1         217 F-EDKVFWTDIINEAIFSANRLTGSDVNLLA  246 (266)
T ss_dssp             E-TTEEEEEETTTTEEEEEETTTCCCCEEEE
T ss_pred             E-CCEEEEEECCCCeEEEEECCCCcceEEEE
Confidence            6 34444555577888888888877665554

>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Comamonas testosteroni [TaxId: 285]

Probab=98.03  E-value=0.002  Score=54.27  Aligned_cols=257  Identities=11%  Similarity=0.073  Sum_probs=139.0

Q ss_pred             EEEecCCCCeEEEEecCCceEEEEEecCCCC-cceEEEEe---CCceEEEEEcC-----CCeEEEEeCCCcccceecccC
Q psy10867          7 VAFSYDGSGAISVWEPKGGTLLMSYKGASVL-SPHSMCLL---GNDYVLGVEKG-----KPMIQAWPVNSQEKAQLRLIC   77 (343)
Q Consensus         7 ~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~-~v~~~~~~---~~~~~~~~~~~-----~~~i~iw~~~~~~~~~~~~~~   77 (343)
                      .+|.+..++.+.-.|..+|+.+......... .-..+.-.   -++.+++....     .|.|+-+|..+++.+-.+...
T Consensus       130 ~v~~~t~~g~l~alda~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~vivg~~~~~~~~~G~v~a~D~~TG~~~W~~~t~  209 (573)
T d1kb0a2         130 KVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSV  209 (573)
T ss_dssp             EEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESS
T ss_pred             cEEEEecccceeeeccccccceecccCccCCcceEEeecceEEEeccEEEeeccccccccceEEEEecCCccceeeeeec
Confidence            3566677889998999999998776543210 10111111   14555554322     368999999999876332110


Q ss_pred             ---C----------------------------cce-EEEEECCCCCEEEE--e------------------cCCeEEEEE
Q psy10867         78 ---P----------------------------GRI-SSMQASPDAAYIAV--S------------------IETKLHMWQ  105 (343)
Q Consensus        78 ---~----------------------------~~v-~~~~~s~~~~~l~~--~------------------~d~~i~v~~  105 (343)
                         .                            ..+ ...++.++..++..  +                  ....|.-.|
T Consensus       210 ~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~G~~vW~~~s~D~~~g~~~~~~g~~~~~~~~~~~~~~g~~~~~~svvAld  289 (573)
T d1kb0a2         210 PGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALD  289 (573)
T ss_dssp             CCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEEC
T ss_pred             cccCCCCCCcccccccccccCCCCceeecCCCCcccccceEchhhCeeeeccCCCccccccccccccccccccceEEEec
Confidence               0                            111 12334444444432  1                  012477778


Q ss_pred             ccCCceEEEecccC---------CCeEEEEEecCC---CEEEEecCCCeEEEeecCccceeeeeecCCCCC------CCC
Q psy10867        106 ISSGRLLATASSHY---------QPITIVKWSADS---NFIVTGGEDGTICVWQLSRLICKQTVAFGIPGS------SGK  167 (343)
Q Consensus       106 ~~~~~~~~~~~~~~---------~~v~~~~~~~~~---~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~------~~~  167 (343)
                      +++++....++...         .+........++   ..++.++.+|.+.++|..+++............      ...
T Consensus       290 ~~tG~~~W~~q~~~~d~wd~d~~~~~~l~~~~~~g~~~~~v~~~~k~G~l~~lDr~tGe~~~~~~~~~~~~~~~~~~~~~  369 (573)
T d1kb0a2         290 PDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGK  369 (573)
T ss_dssp             TTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSC
T ss_pred             ccchheeecccccCcccccccccceeeecceecCCCceeeeeeccccceeEEeccccccccccccccccccccccccccc
Confidence            88888776554321         112222222333   367788899999999999998776554221100      000


Q ss_pred             c-----cccccceeeeecc-cc-cceEEEEeecCCCceEEEEee------------------------------------
Q psy10867        168 G-----VTGLTEPLHVKSQ-HS-LPVTHVTLSKLGAKSRVASVS------------------------------------  204 (343)
Q Consensus       168 ~-----~~~~~~~~~~~~~-~~-~~v~~~~~~~~~~~~~l~~~~------------------------------------  204 (343)
                      .     ............+ +. ..-..++++|+.  .+++...                                    
T Consensus       370 ~~~~~~~~~~~~~~~~~pg~~Gg~~w~~~a~dp~~--~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  447 (573)
T d1kb0a2         370 PIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQT--GLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFN  447 (573)
T ss_dssp             EEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTT--TEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEEC
T ss_pred             eeeeeeccccccceEEeecccCCccccccccCCCc--ceEEeeccccceeeecccccccccCCCCccccccccccccccc
Confidence            0     0000000000000 00 000112333332  1111100                                    


Q ss_pred             -------CCCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeeccccccccc
Q psy10867        205 -------HDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHH  265 (343)
Q Consensus       205 -------~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~  265 (343)
                             .-|.+.-||+.+++.+.......+...-..+-.+.++++|+.||.++.+|.++++.+.++.
T Consensus       448 ~~p~~~~~~G~l~AiD~~tGk~~W~~~~~~p~~gg~lstagglVF~G~~dg~l~A~Da~TGe~LW~~~  515 (573)
T d1kb0a2         448 AEPPKSKPFGRLLAWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAP  515 (573)
T ss_dssp             SSCCCSCCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred             cCCCCCCCcccEEEeCCCCCceEeeecCCCCCCCceEEEcCCEEEEECCCCeEEEEECCCCcEeEEEE
Confidence                   1157888999999999988865543333334468899999999999999999998876654

>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Nidogen
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.00  E-value=0.0014  Score=49.13  Aligned_cols=200  Identities=11%  Similarity=-0.030  Sum_probs=121.5

Q ss_pred             ecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeC-CceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECC
Q psy10867         10 SYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLG-NDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASP   88 (343)
Q Consensus        10 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~   88 (343)
                      +-..++.|+..++..+.....+..... .+.++++.. .+.+..+....+.|.+.+++.................+++.|
T Consensus        53 sd~~~~~I~~~~l~g~~~~~v~~~~~~-~p~~iAvD~~~~~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~p~~l~vdp  131 (263)
T d1npea_          53 TDISEPSIGRASLHGGEPTTIIRQDLG-SPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDP  131 (263)
T ss_dssp             EETTTTEEEEEESSSCCCEEEECTTCC-CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEET
T ss_pred             EECCCCeEEEEEcccCCcEEEEEeccc-cccEEEEeccCCeEEEeccCCCEEEEEecCCceEEEEecccccCCcEEEEec
Confidence            333456677666655444444444334 788999985 456666666668999999886654433333446788999998


Q ss_pred             CCCEEEEec----CCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEe-cCCCeEEEeecCccceeeeeecCCCC
Q psy10867         89 DAAYIAVSI----ETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTG-GEDGTICVWQLSRLICKQTVAFGIPG  163 (343)
Q Consensus        89 ~~~~l~~~~----d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~~~  163 (343)
                      ...++.-..    ...|..-++............-.....+++.+.++.|+.+ ...+.|...++.......        
T Consensus       132 ~~g~ly~t~~~~~~~~I~r~~~dG~~~~~i~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~~g~~~~~--------  203 (263)
T d1npea_         132 VRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRK--------  203 (263)
T ss_dssp             TTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEE--------
T ss_pred             ccCcEEEeecCCCCcEEEEecCCCCCceeeeeecccccceEEEeecCcEEEEEeCCCCEEEEEECCCCCeEE--------
Confidence            777666432    2245555665444333333333456899998877766554 567889888887643211        


Q ss_pred             CCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeec--CCcEEEEEEcC
Q psy10867        164 SSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLIL--DTRLTCVAFDG  236 (343)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~--~~~i~~~~~~~  236 (343)
                                    ...+. .....+++. ++  .+..+-...+.|...|..+++....+..  ......+.+.+
T Consensus       204 --------------v~~~~-~~P~~lav~-~~--~lYwtd~~~~~I~~~~~~~g~~~~~~~~~~~~~~~gi~v~~  260 (263)
T d1npea_         204 --------------VLEGL-QYPFAVTSY-GK--NLYYTDWKTNSVIAMDLAISKEMDTFHPHKQTRLYGITIAL  260 (263)
T ss_dssp             --------------EEECC-CSEEEEEEE-TT--EEEEEETTTTEEEEEETTTTEEEEEECCSSCCCCCCEEEEC
T ss_pred             --------------EECCC-CCcEEEEEE-CC--EEEEEECCCCEEEEEECCCCccceEECCCCCCCcceEEEeC
Confidence                          11222 224577776 33  5666666778899999988887766542  22343444433

>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Galactose oxidase, central domain
family: Galactose oxidase, central domain
domain: Galactose oxidase, central domain
species: Fungi (Fusarium sp.) [TaxId: 29916]

Probab=97.96  E-value=0.0025  Score=50.67  Aligned_cols=283  Identities=8%  Similarity=-0.033  Sum_probs=146.8

Q ss_pred             cceEEEEeCCceEEEEEcCC-----C------eEEEEeCCCcccceec---ccCCcceEEEEECCCCCEEEEe-c-CCeE
Q psy10867         38 SPHSMCLLGNDYVLGVEKGK-----P------MIQAWPVNSQEKAQLR---LICPGRISSMQASPDAAYIAVS-I-ETKL  101 (343)
Q Consensus        38 ~v~~~~~~~~~~~~~~~~~~-----~------~i~iw~~~~~~~~~~~---~~~~~~v~~~~~s~~~~~l~~~-~-d~~i  101 (343)
                      .+...+...+|++++.|..+     +      .+.+||..+++.....   ..+.......++.+++++++.+ . ...+
T Consensus        21 ~~~~a~~~~~gkv~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~i~v~Gg~~~~~~  100 (387)
T d1k3ia3          21 PAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKT  100 (387)
T ss_dssp             CSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCE
T ss_pred             ccEEEEEeeCCEEEEEEeecCcccCCCCCceeEEEEEECCCCcEeecCCCCCCcccceeEEEEecCCcEEEeecCCCcce
Confidence            44444555678877766531     1      3779999987654321   1233334466788999999985 2 3589


Q ss_pred             EEEEccCCceEEEeccc-CCCeEEEEEecCCCEEEEecCC------CeEEEeecCccceeeeeecCCCCCCCCccccccc
Q psy10867        102 HMWQISSGRLLATASSH-YQPITIVKWSADSNFIVTGGED------GTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTE  174 (343)
Q Consensus       102 ~v~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (343)
                      .+||..+..-...-... ...-...+..+|++.++.|+.+      ..+.+||..+..-...-....             
T Consensus       101 ~~yd~~~~~w~~~~~~~~~r~~~~~~~~~dG~v~v~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~-------------  167 (387)
T d1k3ia3         101 SLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKV-------------  167 (387)
T ss_dssp             EEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCS-------------
T ss_pred             eEecCccCcccccccccccccccceeeecCCceeeeccccccccccceeeeecCCCCceeecCCCcc-------------
Confidence            99999887654322111 1123456677899999988753      358899988764221100000             


Q ss_pred             eeeeecccc-----cceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee--cC-------CcEEEEEE-cCCCC
Q psy10867        175 PLHVKSQHS-----LPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI--LD-------TRLTCVAF-DGTED  239 (343)
Q Consensus       175 ~~~~~~~~~-----~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~--~~-------~~i~~~~~-~~~~~  239 (343)
                      .......+.     ..-..+...+++  ..+..+...+.+.++|..+........  ..       ..-.++.+ ..+++
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~G--~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  245 (387)
T d1k3ia3         168 NPMLTADKQGLYRSDNHAWLFGWKKG--SVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGK  245 (387)
T ss_dssp             GGGCCCCTTGGGTTTCSCCEEECGGG--CEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTE
T ss_pred             cccccccccceeeccceeEEEEeCCC--CEEEecCcCCcEEecCcccCcEeeccccccCcccCcccccccEEEeeccCCc
Confidence            000000000     001112233455  677777778888888877664432211  11       01122333 33566


Q ss_pred             EEEEEcCCC--------cEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCC----------
Q psy10867        240 NIYMGTSEG--------VIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADE----------  301 (343)
Q Consensus       240 ~l~~~~~d~--------~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg----------  301 (343)
                      .++.|+...        ...+.++.........    ......+.. ...-.+....+|+++++.|+.+.          
T Consensus       246 v~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~p~-~r~~~~~~~~~dg~i~v~GG~~~~~~~~~~~~~  320 (387)
T d1k3ia3         246 ILTFGGSPDYQDSDATTNAHIITLGEPGTSPNT----VFASNGLYF-ARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPV  320 (387)
T ss_dssp             EEEECCBSSSSSSBCCCCEEEEECCSTTSCCEE----EECTTCCSS-CCBSCEEEECTTSCEEEECCBSBCCTTCCCSBC
T ss_pred             eEEEEeccCCCCCcccceeecccccccccCCCc----eeecccccc-ccccceeeeccCCeEEEECCcccCccCCCCcEe
Confidence            666665321        2333333221111000    000111111 11122345568999999888531          


Q ss_pred             -cEEEEeccccee--eeecccCCce-EEEEEccCCCeeeeccc
Q psy10867        302 -TLKIWHTISRQC--LRTIQHKGPV-LGAFLGLLPPAIHDYDF  340 (343)
Q Consensus       302 -~i~iwd~~~~~~--~~~~~~~~~v-~~~~~sp~~~~l~~~~~  340 (343)
                       .+.+||..+.+-  +..+.....- ......+||+.|+.++.
T Consensus       321 ~~ve~Ydp~~~~W~~~~~~~~~R~~Hs~a~l~~dG~v~v~GG~  363 (387)
T d1k3ia3         321 FTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGG  363 (387)
T ss_dssp             CCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred             ceEEEEECCCCeEEECCCCCCcccceEEEEECCCCEEEEEeCC
Confidence             478899877643  2222211111 23456899999998873

>d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylobacterium extorquens [TaxId: 408]

Probab=97.96  E-value=0.0038  Score=52.73  Aligned_cols=257  Identities=10%  Similarity=0.057  Sum_probs=143.7

Q ss_pred             EEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeC---CceEEEEEc-----CCCeEEEEeCCCcccceecccCC
Q psy10867          7 VAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLG---NDYVLGVEK-----GKPMIQAWPVNSQEKAQLRLICP   78 (343)
Q Consensus         7 ~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~~~~~~-----~~~~i~iw~~~~~~~~~~~~~~~   78 (343)
                      .+|.++.|+.|.-.|.++|+.+..+.......-..+.-.|   ++.+++...     ..|.|+-+|+.+++.+-.+....
T Consensus       123 ~v~~~t~dg~l~Alda~tG~~~w~~~~~d~~~~~~~t~~P~v~~~~vivg~~~~e~~~~G~v~A~Da~TG~~~W~~~t~~  202 (596)
T d1w6sa_         123 LILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATG  202 (596)
T ss_dssp             EEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSS
T ss_pred             EEEEEeCCCCeEeeccccCceeccccccccccccccccCCcEECCeEEEeeccccccccCceEEEECCCCcEEEEeeccC
Confidence            5778888999999999999999988643210111111112   455555443     23889999999998774321100


Q ss_pred             -------------------------------------cce-EEEEECCCCCEEEE--ec---------------CCeEEE
Q psy10867         79 -------------------------------------GRI-SSMQASPDAAYIAV--SI---------------ETKLHM  103 (343)
Q Consensus        79 -------------------------------------~~v-~~~~~s~~~~~l~~--~~---------------d~~i~v  103 (343)
                                                           ..+ ..+++.+...++..  +.               ...|.-
T Consensus       203 ~~~~~~~~~~~~~~~~~~g~~~~~~~tw~g~~~~~gg~~~W~~~s~D~~~~lvy~~tg~~~p~~~~~r~g~n~ys~sivA  282 (596)
T d1w6sa_         203 PDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFG  282 (596)
T ss_dssp             CHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEE
T ss_pred             CccccccccccccccccccccccccccCCCCceecCCCccccccccccCCCeeecccccccccccccccccccccccccc
Confidence                                                 001 12334444444432  21               245888


Q ss_pred             EEccCCceEEEecc--cC-------CCeEEEEE-ecCC---CEEEEecCCCeEEEeecCccceeeeeecCCCCCC-----
Q psy10867        104 WQISSGRLLATASS--HY-------QPITIVKW-SADS---NFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSS-----  165 (343)
Q Consensus       104 ~~~~~~~~~~~~~~--~~-------~~v~~~~~-~~~~---~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-----  165 (343)
                      .|+++|+.+-.++.  |.       .....+.. ..++   +.++....+|.+.++|..+++.+...........     
T Consensus       283 lD~~TG~~~W~~Q~~~~D~Wd~d~~~~~~l~d~~~~~G~~~~~v~~~~k~G~~~vlDr~tG~~i~~~~~~~~~~~~~~~d  362 (596)
T d1w6sa_         283 RDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVD  362 (596)
T ss_dssp             EETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEEC
T ss_pred             cccccccccccccceeccccCCccccceeeeeccccccccccceeccccccceeeecCCCCceeeecccccccccccccc
Confidence            89999998876653  21       11212222 2244   3677889999999999999987765443211100     


Q ss_pred             ---CCccc------ccc-ceeeeeccccc--ceEEEEeecCCCceEEEEe------------------------------
Q psy10867        166 ---GKGVT------GLT-EPLHVKSQHSL--PVTHVTLSKLGAKSRVASV------------------------------  203 (343)
Q Consensus       166 ---~~~~~------~~~-~~~~~~~~~~~--~v~~~~~~~~~~~~~l~~~------------------------------  203 (343)
                         .....      ... .......+..+  .-...+++|..  .+++..                              
T Consensus       363 ~~~~~p~~~~~~~~~~~~~~~~i~pg~~Gg~nw~~~a~dp~~--~l~yvp~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~  440 (596)
T d1w6sa_         363 LKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKR--ELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYP  440 (596)
T ss_dssp             TTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTT--TEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEE
T ss_pred             ccccccccCccccccCCccceeEecccccccccCccccCCCC--ceEEeccccccccccccccccccccccccccccccc
Confidence               00000      000 00000000000  00112222222  111110                              


Q ss_pred             ---------eCCCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeeccccccccc
Q psy10867        204 ---------SHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHH  265 (343)
Q Consensus       204 ---------~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~  265 (343)
                               -.-|.|.-||+.+++.+.......+...-.++..+.+++.|+.||.++.+|.++++.+.++.
T Consensus       441 ~~~g~~~~~~~~G~l~A~D~~TG~~~W~~~~~~~~~gg~lsTagglVF~G~~Dg~l~A~Da~TGe~LW~~~  511 (596)
T d1w6sa_         441 GPKGDRQNYEGLGQIKAYNAITGDYKWEKMERFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFK  511 (596)
T ss_dssp             CTTSBTTTTBCCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred             CcccCcccCCCcceEEEEeCCCCceecccCCCCCCccceeEecCCEEEEECCCCeEEEEECCCCcEeeEEE
Confidence                     01267999999999999887765554433344467889999999999999999988876653

>d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: Serum paraoxonase/arylesterase 1, PON1
domain: Serum paraoxonase/arylesterase 1, PON1
species: Rabit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=97.85  E-value=0.0035  Score=48.76  Aligned_cols=34  Identities=6%  Similarity=-0.042  Sum_probs=27.0

Q ss_pred             cCCcEEEEEEcCCCCEEEEE-cCCCcEEEEEeecc
Q psy10867        225 LDTRLTCVAFDGTEDNIYMG-TSEGVIKSFCLRQV  258 (343)
Q Consensus       225 ~~~~i~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~  258 (343)
                      .-...+.++++|++++|+++ +..++|++|++...
T Consensus       204 ~l~~pNGI~~s~d~~~lyVa~t~~~~i~~y~~~~~  238 (340)
T d1v04a_         204 GFDFANGINISPDGKYVYIAELLAHKIHVYEKHAN  238 (340)
T ss_dssp             EESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTT
T ss_pred             CCCccceeEECCCCCEEEEEeCCCCeEEEEEeCCC
Confidence            34568899999999988775 55789999998754

>d1h6la_ b.68.3.1 (A:) Thermostable phytase (3-phytase) {Bacillus amyloliquefaciens [TaxId: 1390]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Thermostable phytase (3-phytase)
family: Thermostable phytase (3-phytase)
domain: Thermostable phytase (3-phytase)
species: Bacillus amyloliquefaciens [TaxId: 1390]

Probab=97.83  E-value=0.0031  Score=48.95  Aligned_cols=206  Identities=13%  Similarity=0.174  Sum_probs=117.9

Q ss_pred             CCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEec----CC--CEEEEecC--C--CeEEEeecCccc-eeee
Q psy10867         89 DAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSA----DS--NFIVTGGE--D--GTICVWQLSRLI-CKQT  156 (343)
Q Consensus        89 ~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~----~~--~~l~s~~~--d--g~i~iwd~~~~~-~~~~  156 (343)
                      +..++++ ..++-|++||++ |+.++.+.  .+.+..+..-.    ++  .-++.++.  +  .+|.+|.+.... ....
T Consensus        39 ~~SlI~gTdK~~Gl~vYdL~-G~~l~~~~--~Gr~NNVDvr~~~~l~~~~~di~vasnR~~~~~~l~~~~id~~~~~l~~  115 (353)
T d1h6la_          39 QNSKLITTNKKSGLAVYSLE-GKMLHSYH--TGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQS  115 (353)
T ss_dssp             GGCEEEEEETTSCCEEEETT-CCEEEECC--SSCEEEEEEEEEEEETTEEEEEEEEEECCTTTCEEEEEEEETTTTEEEE
T ss_pred             CccEEEEEcCcCCEEEEcCC-CcEEEecc--cCCcCccccccccccCCcceEEEEEeCCcCcceeEEEEEecCccccccc
Confidence            3455555 456679999985 88887764  34566655432    22  23444442  2  368888775321 1111


Q ss_pred             eecCCCCCCCCccccccceeeeecccccceEEEEe--ecCCCceEEEEeeCCCeEEEEecC---CC----ceEEEeecCC
Q psy10867        157 VAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTL--SKLGAKSRVASVSHDRTCKIFDLC---TG----EDLLSLILDT  227 (343)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~l~~~~~d~~i~~wd~~---~~----~~~~~~~~~~  227 (343)
                      +..               +..........+..+|+  ++.....+++....+|.+..|.+.   .+    +.++.+....
T Consensus       116 ~~~---------------~~~p~~~~~~~vYGlc~y~~~~~g~~~afv~~k~G~v~q~~l~~~~~g~v~~~lvr~f~~~~  180 (353)
T d1h6la_         116 ITD---------------PNRPIASAIDEVYGFSLYHSQKTGKYYAMVTGKEGEFEQYELNADKNGYISGKKVRAFKMNS  180 (353)
T ss_dssp             CSC---------------SSSCEECSSSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSSEEEEEEEEEECSS
T ss_pred             ccc---------------cccccccccCcceEEEEEecCCCCeEEEEEEcCCceEEEEEEEcCCCCceeeEeeeccCCCC
Confidence            100               00000111234667777  454322466777889999888763   22    3456677788


Q ss_pred             cEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCcc--ccccCcEEEEEEc--cCCC-E-EEEEeCCC
Q psy10867        228 RLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDF--IGHEKQVTSLSCS--ITGI-T-LLSSSADE  301 (343)
Q Consensus       228 ~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~s--~~~~-~-l~s~~~dg  301 (343)
                      .+..+.+.+....|+++-.+..|+.+++..........      +...  ......+..|++-  +++. + |+|.-.++
T Consensus       181 q~EGCVvDde~~~LyisEE~~Giw~~~a~~~~~~~~~~------i~~~~g~~l~~D~EGlaiy~~~~~~GylivSsQG~n  254 (353)
T d1h6la_         181 QTEGMAADDEYGSLYIAEEDEAIWKFSAEPDGGSNGTV------IDRADGRHLTPDIEGLTIYYAADGKGYLLASSQGNS  254 (353)
T ss_dssp             CEEEEEEETTTTEEEEEETTTEEEEEESSTTSCSCCEE------EEECSSSSCCSCEEEEEEEECGGGCEEEEEEEGGGT
T ss_pred             ccceEEEeCCCCcEEEecCccceEEEEeccCCCcccee------eecccCccccCCccccEEEEcCCCCeEEEEEcCCCC
Confidence            99999999999999999888776666554321111100      1011  1124556677643  2332 4 45555678


Q ss_pred             cEEEEeccc-ceeeeecc
Q psy10867        302 TLKIWHTIS-RQCLRTIQ  318 (343)
Q Consensus       302 ~i~iwd~~~-~~~~~~~~  318 (343)
                      +..+||... .+.+..|.
T Consensus       255 ~f~vydr~~~~~~~g~F~  272 (353)
T d1h6la_         255 SYAIYERQGQNKYVADFQ  272 (353)
T ss_dssp             EEEEEESSTTCCEEEEEE
T ss_pred             eEEEEecCCCccccceEE
Confidence            999999876 46666664

>d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Peptidase/esterase 'gauge' domain
family: Prolyl oligopeptidase, N-terminal domain
domain: Prolyl oligopeptidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.33  E-value=0.026  Score=45.41  Aligned_cols=225  Identities=13%  Similarity=0.083  Sum_probs=115.0

Q ss_pred             ceEEEEECCCCCEEEEe--cCC----eEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCC-------------
Q psy10867         80 RISSMQASPDAAYIAVS--IET----KLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGED-------------  140 (343)
Q Consensus        80 ~v~~~~~s~~~~~l~~~--~d~----~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-------------  140 (343)
                      .+..+.+|||++++|.+  .+|    .++++|+.+++.+...-.. .....++|.+|++.|+....+             
T Consensus       126 ~~~~~~~Spd~~~la~s~d~~G~e~~~l~v~Dl~tg~~~~~~i~~-~~~~~~~W~~D~~~~~Y~~~~~~~~~~~~~~~~~  204 (430)
T d1qfma1         126 ALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETST  204 (430)
T ss_dssp             EEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCC
T ss_pred             eecceEecCCCCEEEEEeccccCchheeEEeccCcceeccccccc-ccccceEEcCCCCEEEEEEeccccCccccccccc
Confidence            45567889999999952  223    7999999999876422111 112468899999977654322             


Q ss_pred             ---CeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEe-e--CCCe--EEEE
Q psy10867        141 ---GTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASV-S--HDRT--CKIF  212 (343)
Q Consensus       141 ---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~-~--~d~~--i~~w  212 (343)
                         ..|..+.+.+......                  .+.........+..+..++++  ++++.. .  .+..  +.+.
T Consensus       205 ~~~~~v~~h~lgt~~~~d~------------------~v~~e~d~~~~~~~~~~s~d~--~~l~i~~~~~~~~~~~~~~~  264 (430)
T d1qfma1         205 NLHQKLYYHVLGTDQSEDI------------------LCAEFPDEPKWMGGAELSDDG--RYVLLSIREGCDPVNRLWYC  264 (430)
T ss_dssp             CCCCEEEEEETTSCGGGCE------------------EEECCTTCTTCEEEEEECTTS--CEEEEEEECSSSSCCEEEEE
T ss_pred             CCcceEEEEECCCCccccc------------------cccccccCCceEEeeeccCCc--ceeeEEeeccCCccEEEEEe
Confidence               2577777766432211                  112112223346667778888  455432 2  2333  4444


Q ss_pred             ecCCCce--------EEEeec-CCcEEEEEEcCCCCEEEEEc---CCCcEEEEEeecccccccccccCCCCCCc-ccccc
Q psy10867        213 DLCTGED--------LLSLIL-DTRLTCVAFDGTEDNIYMGT---SEGVIKSFCLRQVPRTRDHHIQDSTSNPD-FIGHE  279 (343)
Q Consensus       213 d~~~~~~--------~~~~~~-~~~i~~~~~~~~~~~l~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~-~~~~~  279 (343)
                      |+.....        ...... .....-+ -+.++.+++...   .++.|...++.......         ... +..+.
T Consensus       265 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Tn~~a~~~~L~~~~~~~~~~~~---------w~~vi~~~~  334 (430)
T d1qfma1         265 DLQQESNGITGILKWVKLIDNFEGEYDYV-TNEGTVFTFKTNRHSPNYRLINIDFTDPEESK---------WKVLVPEHE  334 (430)
T ss_dssp             EGGGSSSSSCSSCCCEEEECSSSSCEEEE-EEETTEEEEEECTTCTTCEEEEEETTBCCGGG---------CEEEECCCS
T ss_pred             eCCCcccccccccceeEeecccccceEEE-ecCCceeecccCcccccceeEEecCCCCcccc---------ceEEecccC
Confidence            5443211        111111 2222222 222223333322   24566666655432211         111 22344


Q ss_pred             CcEEEEEEccCCCEEEEE-eCCC--cEEEEecccceeeeecc-cCCceEEEEEccCCCee
Q psy10867        280 KQVTSLSCSITGITLLSS-SADE--TLKIWHTISRQCLRTIQ-HKGPVLGAFLGLLPPAI  335 (343)
Q Consensus       280 ~~v~~~~~s~~~~~l~s~-~~dg--~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~l  335 (343)
                      ..+..-.+...+.+|+.. -.++  .|++++..+++....+. ..+.+..+...++...+
T Consensus       335 ~~~~~~~~~~~~~~lvl~~~~~~~~~l~v~~~~~~~~~~~~~~~~~sv~~~~~~~~~~~~  394 (430)
T d1qfma1         335 KDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEI  394 (430)
T ss_dssp             SCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEE
T ss_pred             cceeeeEEEEECCEEEEEEEcCCEeEEEEEECCCCcEEEecCCCCceEeeccCCCCCCEE
Confidence            445444444445555544 4554  58889998877655444 45556666555555443

>d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Peptidase/esterase 'gauge' domain
family: Prolyl oligopeptidase, N-terminal domain
domain: Prolyl oligopeptidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.26  E-value=0.031  Score=44.90  Aligned_cols=247  Identities=11%  Similarity=-0.000  Sum_probs=125.5

Q ss_pred             cceEEEEeCCceEEEEEcC-----CCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-ecC-------------
Q psy10867         38 SPHSMCLLGNDYVLGVEKG-----KPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SIE-------------   98 (343)
Q Consensus        38 ~v~~~~~~~~~~~~~~~~~-----~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d-------------   98 (343)
                      .+..++++|++++++.+-+     .-.++++|+.+++.+..... ......++|++|++.|.- ..+             
T Consensus       126 ~~~~~~~Spd~~~la~s~d~~G~e~~~l~v~Dl~tg~~~~~~i~-~~~~~~~~W~~D~~~~~Y~~~~~~~~~~~~~~~~~  204 (430)
T d1qfma1         126 ALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLE-RVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETST  204 (430)
T ss_dssp             EEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEE-EECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCC
T ss_pred             eecceEecCCCCEEEEEeccccCchheeEEeccCcceecccccc-cccccceEEcCCCCEEEEEEeccccCccccccccc
Confidence            4567788999988775432     23899999999987642211 122356889999987763 211             


Q ss_pred             ---CeEEEEEccCCc--eEEEecccC--CCeEEEEEecCCCEEEEec---CCCeEEEe--ecCccceeeeeecCCCCCCC
Q psy10867         99 ---TKLHMWQISSGR--LLATASSHY--QPITIVKWSADSNFIVTGG---EDGTICVW--QLSRLICKQTVAFGIPGSSG  166 (343)
Q Consensus        99 ---~~i~v~~~~~~~--~~~~~~~~~--~~v~~~~~~~~~~~l~s~~---~dg~i~iw--d~~~~~~~~~~~~~~~~~~~  166 (343)
                         ..|..+.+.+..  ....+....  ..+..+..++++++++...   .+....+|  |+........          
T Consensus       205 ~~~~~v~~h~lgt~~~~d~~v~~e~d~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~~~~~d~~~~~~~~~----------  274 (430)
T d1qfma1         205 NLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGIT----------  274 (430)
T ss_dssp             CCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSC----------
T ss_pred             CCcceEEEEECCCCccccccccccccCCceEEeeeccCCcceeeEEeeccCCccEEEEEeeCCCcccccc----------
Confidence               258888877652  233344333  3466777888998876432   23334444  4433211000          


Q ss_pred             CccccccceeeeecccccceEEEEeecCCCceEEEEee---CCCeEEEEecCCCce--EEEe-e-cCCcEEEEEEcCCCC
Q psy10867        167 KGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVS---HDRTCKIFDLCTGED--LLSL-I-LDTRLTCVAFDGTED  239 (343)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~---~d~~i~~wd~~~~~~--~~~~-~-~~~~i~~~~~~~~~~  239 (343)
                          .................-+. +..+  .+++...   .++.|...++.....  ...+ . ++..+..-.+...+.
T Consensus       275 ----~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~Tn~~a~~~~L~~~~~~~~~~~~w~~vi~~~~~~~~~~~~~~~~~  347 (430)
T d1qfma1         275 ----GILKWVKLIDNFEGEYDYVT-NEGT--VFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSN  347 (430)
T ss_dssp             ----SSCCCEEEECSSSSCEEEEE-EETT--EEEEEECTTCTTCEEEEEETTBCCGGGCEEEECCCSSCEEEEEEEETTT
T ss_pred             ----cccceeEeecccccceEEEe-cCCc--eeecccCcccccceeEEecCCCCccccceEEecccCcceeeeEEEEECC
Confidence                00001112222222222222 2222  3333322   246676677665432  1222 2 233344444444456


Q ss_pred             EEEEEc-CCC--cEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEE-E-Ee--CCCcEEEEecccce
Q psy10867        240 NIYMGT-SEG--VIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLL-S-SS--ADETLKIWHTISRQ  312 (343)
Q Consensus       240 ~l~~~~-~d~--~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-s-~~--~dg~i~iwd~~~~~  312 (343)
                      +|+... .++  .|+++++........           .....+.+..+...++...+. + .|  .-.+++-+|+.+++
T Consensus       348 ~lvl~~~~~~~~~l~v~~~~~~~~~~~-----------~~~~~~sv~~~~~~~~~~~~~~~~ss~~tP~~~y~~Dl~t~~  416 (430)
T d1qfma1         348 FLVLCYLHDVKNTLQLHDLATGALLKI-----------FPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE  416 (430)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEE-----------ECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred             EEEEEEEcCCEeEEEEEECCCCcEEEe-----------cCCCCceEeeccCCCCCCEEEEEEcCCCCCCeEEEEECCCCC
Confidence            666554 444  577888765432211           111234455555445544333 2 22  22678889988875


Q ss_pred             e
Q psy10867        313 C  313 (343)
Q Consensus       313 ~  313 (343)
                      .
T Consensus       417 ~  417 (430)
T d1qfma1         417 L  417 (430)
T ss_dssp             C
T ss_pred             c
Confidence            4

>d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Low density lipoprotein (LDL) receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.14  E-value=0.027  Score=41.91  Aligned_cols=222  Identities=9%  Similarity=-0.076  Sum_probs=129.9

Q ss_pred             EEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCc-eEEEEEcCCCeEEEEeCCCccc----ceecccCCcce
Q psy10867          7 VAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGND-YVLGVEKGKPMIQAWPVNSQEK----AQLRLICPGRI   81 (343)
Q Consensus         7 ~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~i~iw~~~~~~~----~~~~~~~~~~v   81 (343)
                      ++|+...  .|+-.++.+.+....+. ... .+.+++|.+.. .+..+-...+.|.-.+++....    ..........+
T Consensus         4 Ll~s~~~--~I~~~~l~~~~~~~~~~-~~~-~~~~id~d~~~~~lYw~D~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~p   79 (266)
T d1ijqa1           4 LFFTNRH--EVRKMTLDRSEYTSLIP-NLR-NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAP   79 (266)
T ss_dssp             EEEECBS--SEEEEETTSCCCEEEEC-SCS-SEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCC
T ss_pred             EEEECCC--eEEEEECCCCcceeeeC-CCC-ceEEEEEEeCCCEEEEEECCCCEEEEEEecCCCCCcceEEEEeCCCCCc
Confidence            5566543  48888987655444444 334 67889999865 4444444556777666653221    12222333456


Q ss_pred             EEEEECCCCCEEE-E-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEec--CCCeEEEeecCccceeeee
Q psy10867         82 SSMQASPDAAYIA-V-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGG--EDGTICVWQLSRLICKQTV  157 (343)
Q Consensus        82 ~~~~~s~~~~~l~-~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~--~dg~i~iwd~~~~~~~~~~  157 (343)
                      ..+++.+.+..|. + ...+.|.+.++........+.........+++.|...+|+...  ..+.|...++.....    
T Consensus        80 ~glAvD~~~~~lY~~d~~~~~I~v~~~~g~~~~~~~~~~~~~P~~l~vd~~~g~ly~~~~~~~~~I~r~~~dGs~~----  155 (266)
T d1ijqa1          80 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI----  155 (266)
T ss_dssp             CEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCE----
T ss_pred             ceEEEeeccceEEEEecCCCEEEeEecCCceEEEEEcCCCCCcceEEEEcccCeEEEeccCCCcceeEeccCCCce----
Confidence            6788876555444 4 4567999999886665555555556788999998655555433  334566666654321    


Q ss_pred             ecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeec---CCcEEEEEE
Q psy10867        158 AFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLIL---DTRLTCVAF  234 (343)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~---~~~i~~~~~  234 (343)
                                        .......-.....+++.+.++ .+..+-...+.|...++...........   ......+++
T Consensus       156 ------------------~~l~~~~~~~p~gl~iD~~~~-~lYw~d~~~~~I~~~~~dG~~~~~~~~~~~~~~~p~~lav  216 (266)
T d1ijqa1         156 ------------------YSLVTENIQWPNGITLDLLSG-RLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAV  216 (266)
T ss_dssp             ------------------EEEECSSCSCEEEEEEETTTT-EEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEE
T ss_pred             ------------------ecccccccceeeEEEeecccc-EEEEecCCcCEEEEEECCCCCEEEEEeCCCcccccEEEEE
Confidence                              111122335578899998763 4555556678999999865443333222   233566776


Q ss_pred             cCCCCEEEEE-cCCCcEEEEEeec
Q psy10867        235 DGTEDNIYMG-TSEGVIKSFCLRQ  257 (343)
Q Consensus       235 ~~~~~~l~~~-~~d~~i~i~d~~~  257 (343)
                      .  +.+|+.. ..++.|+..+..+
T Consensus       217 ~--~~~ly~td~~~~~I~~~~~~~  238 (266)
T d1ijqa1         217 F--EDKVFWTDIINEAIFSANRLT  238 (266)
T ss_dssp             E--TTEEEEEETTTTEEEEEETTT
T ss_pred             E--CCEEEEEECCCCeEEEEECCC
Confidence            6  4455554 4566776666544

>d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: Serum paraoxonase/arylesterase 1, PON1
domain: Serum paraoxonase/arylesterase 1, PON1
species: Rabit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=97.01  E-value=0.045  Score=42.28  Aligned_cols=189  Identities=8%  Similarity=0.002  Sum_probs=99.7

Q ss_pred             eEEEEEecCCCEEEEecC------------CCeEEEeecCccceeee-eecCCCCCCCCccccccceeeeecccccceEE
Q psy10867        122 ITIVKWSADSNFIVTGGE------------DGTICVWQLSRLICKQT-VAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTH  188 (343)
Q Consensus       122 v~~~~~~~~~~~l~s~~~------------dg~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  188 (343)
                      .-.|...|++..+++++.            .|.|.++|+.+...... +....               .......-....
T Consensus        37 ~EDi~~~~dg~~~issg~~~~~~~~~~~~~~G~i~~~dl~~~~~~~~~l~~~~---------------~~~~~~~f~PhG  101 (340)
T d1v04a_          37 SEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIG---------------NTLDISSFNPHG  101 (340)
T ss_dssp             CCEEEECTTSEEEEEECCCC--------CCCCEEEEEETTSSSCCEEECEEEC---------------SSSCGGGCCEEE
T ss_pred             cceEEECCCCcEEEEecCccCCCCCCCCCCCCeEEEEecCCCCCcceEEEecC---------------CCCCCcceeccc
Confidence            345677777776665532            48899999876532211 10000               000001112233


Q ss_pred             EEe--ecCCCceEEEEe---eCCCeEEEEecCCCce-E---EEeec--CCcEEEEEEcCCCCEEEEEcC---C-------
Q psy10867        189 VTL--SKLGAKSRVASV---SHDRTCKIFDLCTGED-L---LSLIL--DTRLTCVAFDGTEDNIYMGTS---E-------  247 (343)
Q Consensus       189 ~~~--~~~~~~~~l~~~---~~d~~i~~wd~~~~~~-~---~~~~~--~~~i~~~~~~~~~~~l~~~~~---d-------  247 (343)
                      +.+  .+++. .+|++.   ....+|.+|++..... +   ..+.+  ....+.+++..++..+++-..   +       
T Consensus       102 i~l~~~~dg~-~~L~vvnH~~~~~~ieif~~~~~~~~l~~~~~v~~~~~~~pNDv~~~~~g~fy~Tnd~~~~~~~~~~~e  180 (340)
T d1v04a_         102 ISTFIDDDNT-VYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWE  180 (340)
T ss_dssp             EEEEECTTCC-EEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCCSHHHHHHH
T ss_pred             eeEEEcCCCc-EEEEEEeccCCCceeEEEEEeCCCCeEEEEeecCCccccCccceEEecCCCEEEecCccCcChhhhhhh
Confidence            333  34443 244443   2456788888764432 2   22222  234788988888887777321   1       


Q ss_pred             -----CcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEE-EEeCCCcEEEEecccceeee---ecc
Q psy10867        248 -----GVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLL-SSSADETLKIWHTISRQCLR---TIQ  318 (343)
Q Consensus       248 -----~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-s~~~dg~i~iwd~~~~~~~~---~~~  318 (343)
                           +...+|......            .......-...+.++++||+++|+ +-+..+.|++|++.....+.   .+.
T Consensus       181 ~~~~~~~g~v~~~~~~~------------~~~~~~~l~~pNGI~~s~d~~~lyVa~t~~~~i~~y~~~~~~~l~~~~~~~  248 (340)
T d1v04a_         181 MHLGLAWSFVTYYSPND------------VRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLS  248 (340)
T ss_dssp             HHTTCCCEEEEEECSSC------------EEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEE
T ss_pred             HhhcCCceeEEEEcCCc------------eEEEcCCCCccceeEECCCCCEEEEEeCCCCeEEEEEeCCCcccceEEEec
Confidence                 123333333211            111222335678999999998765 55567889999987443222   222


Q ss_pred             cCCceEEEEEccCCCeeeec
Q psy10867        319 HKGPVLGAFLGLLPPAIHDY  338 (343)
Q Consensus       319 ~~~~v~~~~~sp~~~~l~~~  338 (343)
                      -.+..-.+.+.+++..+.++
T Consensus       249 l~~~pDNi~~d~~~g~lwva  268 (340)
T d1v04a_         249 FDTLVDNISVDPVTGDLWVG  268 (340)
T ss_dssp             CSSEEEEEEECTTTCCEEEE
T ss_pred             CCCCCCccEEecCCCEEEEE
Confidence            45556778887654444444

>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Ethanol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.97  E-value=0.02  Score=48.08  Aligned_cols=79  Identities=15%  Similarity=0.144  Sum_probs=52.1

Q ss_pred             CCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCce
Q psy10867        140 DGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGED  219 (343)
Q Consensus       140 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~  219 (343)
                      .|.+.-+|+.+++........                       .++..-.++..+  .++++|+.||.++.+|.++|+.
T Consensus       465 ~G~l~AiD~~TG~i~W~~~~~-----------------------~p~~~g~lstag--glVF~Gt~dg~l~A~Da~TGe~  519 (582)
T d1flga_         465 VGSLRAMDPVSGKVVWEHKEH-----------------------LPLWAGVLATAG--NLVFTGTGDGYFKAFDAKSGKE  519 (582)
T ss_dssp             SEEEEEECTTTCCEEEEEEES-----------------------SCCCSCCEEETT--TEEEEECTTSEEEEEETTTCCE
T ss_pred             CCeEEEEcCCCCcEEeecCCC-----------------------CCCccceeEEcC--CeEEEeCCCCeEEEEECCCCcE
Confidence            467888888888776654321                       111111122344  5788899999999999999999


Q ss_pred             EEEeecCCcEE--EEEEcCCCC-EEEE
Q psy10867        220 LLSLILDTRLT--CVAFDGTED-NIYM  243 (343)
Q Consensus       220 ~~~~~~~~~i~--~~~~~~~~~-~l~~  243 (343)
                      +.+++.+..+.  -+.|..+|+ |+++
T Consensus       520 LW~~~~~~~~~~~P~ty~~~G~qYv~i  546 (582)
T d1flga_         520 LWKFQTGSGIVSPPITWEQDGEQYLGV  546 (582)
T ss_dssp             EEEEECSSCCCSCCEEEEETTEEEEEE
T ss_pred             eEEEECCCCccccCEEEEECCEEEEEE
Confidence            99998654432  256667785 4544

>d1h6la_ b.68.3.1 (A:) Thermostable phytase (3-phytase) {Bacillus amyloliquefaciens [TaxId: 1390]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Thermostable phytase (3-phytase)
family: Thermostable phytase (3-phytase)
domain: Thermostable phytase (3-phytase)
species: Bacillus amyloliquefaciens [TaxId: 1390]

Probab=96.33  E-value=0.15  Score=39.29  Aligned_cols=191  Identities=8%  Similarity=0.071  Sum_probs=107.9

Q ss_pred             CCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEEC------CCCCEEE-Ee-cC---CeEEEEEccC-CceEE
Q psy10867         46 GNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQAS------PDAAYIA-VS-IE---TKLHMWQISS-GRLLA  113 (343)
Q Consensus        46 ~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s------~~~~~l~-~~-~d---~~i~v~~~~~-~~~~~  113 (343)
                      |+..++.+...++-|.+||++ |+.++.+.  .++++.+..-      ....-++ ++ .+   ..|.+|.+.. ...+.
T Consensus        38 p~~SlI~gTdK~~Gl~vYdL~-G~~l~~~~--~Gr~NNVDvr~~~~l~~~~~di~vasnR~~~~~~l~~~~id~~~~~l~  114 (353)
T d1h6la_          38 PQNSKLITTNKKSGLAVYSLE-GKMLHSYH--TGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQ  114 (353)
T ss_dssp             GGGCEEEEEETTSCCEEEETT-CCEEEECC--SSCEEEEEEEEEEEETTEEEEEEEEEECCTTTCEEEEEEEETTTTEEE
T ss_pred             cCccEEEEEcCcCCEEEEcCC-CcEEEecc--cCCcCccccccccccCCcceEEEEEeCCcCcceeEEEEEecCcccccc
Confidence            345666666666779999996 55554432  3455555432      2222233 33 22   3688888753 33344


Q ss_pred             Eeccc-------CCCeEEEEE--ecC-CC-EEEEecCCCeEEEeecCcccee-eeeecCCCCCCCCccccccceeeeecc
Q psy10867        114 TASSH-------YQPITIVKW--SAD-SN-FIVTGGEDGTICVWQLSRLICK-QTVAFGIPGSSGKGVTGLTEPLHVKSQ  181 (343)
Q Consensus       114 ~~~~~-------~~~v~~~~~--~~~-~~-~l~s~~~dg~i~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (343)
                      .+...       ...++.+|+  ++. +. +++....+|.+..|.+...... ...                +.++.+. 
T Consensus       115 ~~~~~~~p~~~~~~~vYGlc~y~~~~~g~~~afv~~k~G~v~q~~l~~~~~g~v~~----------------~lvr~f~-  177 (353)
T d1h6la_         115 SITDPNRPIASAIDEVYGFSLYHSQKTGKYYAMVTGKEGEFEQYELNADKNGYISG----------------KKVRAFK-  177 (353)
T ss_dssp             ECSCSSSCEECSSSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSSEEE----------------EEEEEEE-
T ss_pred             cccccccccccccCcceEEEEEecCCCCeEEEEEEcCCceEEEEEEEcCCCCceee----------------EeeeccC-
Confidence            44321       124677777  553 44 5667778899998887432110 000                1333333 


Q ss_pred             cccceEEEEeecCCCceEEEEeeCCCeEEEEecCC--Cc---eEEEee---cCCcEEEEEEcC--CCC-EEEE-EcCCCc
Q psy10867        182 HSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCT--GE---DLLSLI---LDTRLTCVAFDG--TED-NIYM-GTSEGV  249 (343)
Q Consensus       182 ~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~--~~---~~~~~~---~~~~i~~~~~~~--~~~-~l~~-~~~d~~  249 (343)
                      -...+..+.+.+..  ..|+.+-++.-+..++...  ..   .+....   ....+..++.-.  ++. +|++ .-.+++
T Consensus       178 ~~~q~EGCVvDde~--~~LyisEE~~Giw~~~a~~~~~~~~~~i~~~~g~~l~~D~EGlaiy~~~~~~GylivSsQG~n~  255 (353)
T d1h6la_         178 MNSQTEGMAADDEY--GSLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTPDIEGLTIYYAADGKGYLLASSQGNSS  255 (353)
T ss_dssp             CSSCEEEEEEETTT--TEEEEEETTTEEEEEESSTTSCSCCEEEEECSSSSCCSCEEEEEEEECGGGCEEEEEEEGGGTE
T ss_pred             CCCccceEEEeCCC--CcEEEecCccceEEEEeccCCCccceeeecccCccccCCccccEEEEcCCCCeEEEEEcCCCCe
Confidence            34568888888877  6888888887776666541  11   121211   234567776543  333 5544 445789


Q ss_pred             EEEEEeecc
Q psy10867        250 IKSFCLRQV  258 (343)
Q Consensus       250 i~i~d~~~~  258 (343)
                      ..+||....
T Consensus       256 f~vydr~~~  264 (353)
T d1h6la_         256 YAIYERQGQ  264 (353)
T ss_dssp             EEEEESSTT
T ss_pred             EEEEecCCC
Confidence            999998763

>d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Soluble quinoprotein glucose dehydrogenase
family: Soluble quinoprotein glucose dehydrogenase
domain: Soluble quinoprotein glucose dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=95.86  E-value=0.32  Score=39.00  Aligned_cols=60  Identities=10%  Similarity=-0.048  Sum_probs=42.0

Q ss_pred             cccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee---------cCCcEEEEEEcCC---CCEEEE
Q psy10867        182 HSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI---------LDTRLTCVAFDGT---EDNIYM  243 (343)
Q Consensus       182 ~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~---------~~~~i~~~~~~~~---~~~l~~  243 (343)
                      .-...++|+|.|++  +++++--..|.|++++..+++......         .+.....++|+|+   ..+++.
T Consensus        25 ~L~~P~~la~~pdg--~llVter~~G~i~~v~~~~g~~~~i~~~~~~~~~~~ge~GLLgia~~Pdf~~n~~iYv   96 (450)
T d1crua_          25 NLNKPHALLWGPDN--QIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYI   96 (450)
T ss_dssp             CCSSEEEEEECTTS--CEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEE
T ss_pred             CCCCceEEEEeCCC--eEEEEEecCCEEEEEECCCCcEeecccCCccccccCCCCceeeEEeCCCCccCCEEEE
Confidence            34567899999999  677665557999999987775533222         1346789999995   445555

>d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nucleoporin domain
family: Nucleoporin domain
domain: Nucleoporin NUP159
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.42  E-value=0.41  Score=37.18  Aligned_cols=182  Identities=11%  Similarity=0.005  Sum_probs=101.0

Q ss_pred             cceEEEEeCCceEEEEEcCCCeEEEEeCCCccc---------ceecccCCcceEEEEECCCCCEEEEecCCeEEEEEccC
Q psy10867         38 SPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEK---------AQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISS  108 (343)
Q Consensus        38 ~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~---------~~~~~~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~  108 (343)
                      ...-++.++..-++++|+.+ .+.|..++.-+.         .......-..|..++|+.|  .|+...++.+..++..+
T Consensus        38 ~~~LLAVsn~~GLl~aa~~~-~l~V~~t~~l~~~~~~~~~~~~~~~~~~ip~v~~vafs~d--~l~v~~~~~l~~~~~~~  114 (381)
T d1xipa_          38 SLQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKEIPDVIFVCFHGD--QVLVSTRNALYSLDLEE  114 (381)
T ss_dssp             CCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECTTEEEEEEETT--EEEEEESSEEEEEESSS
T ss_pred             ccceEEEeCCCCEEEEECCC-EEEEEEHHHHHHHhhccCCCCcceeccCCCCeEEEEeeCC--EEEEEeCCCEEEEEeec
Confidence            56778888866556566553 567765322110         0001111235889999744  57777778888888776


Q ss_pred             CceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEE
Q psy10867        109 GRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTH  188 (343)
Q Consensus       109 ~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  188 (343)
                      -........-..++..+.++|.  .++....++.+.++++..........                ...... -...+.+
T Consensus       115 l~~~~~~~~~~~~~~~~~~~p~--~~~l~~~~~~~~~~~l~~~~~~~~~~----------------~v~~~~-~~~~~~~  175 (381)
T d1xipa_         115 LSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQLAQ----------------NVTSFD-VTNSQLA  175 (381)
T ss_dssp             TTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEEEEE----------------SEEEEE-ECSSEEE
T ss_pred             cccccccccccccccceecCCc--eeEEEecCCCEEEEEeccCccccccC----------------CcceEE-ecCCceE
Confidence            5544444444567888888764  45666778999999988764322110                011111 1255778


Q ss_pred             EEeecCCCceEEEEeeCCCeEEE-EecCCCceEEE-eecCCcEEEEEEcCCCCEEEEE
Q psy10867        189 VTLSKLGAKSRVASVSHDRTCKI-FDLCTGEDLLS-LILDTRLTCVAFDGTEDNIYMG  244 (343)
Q Consensus       189 ~~~~~~~~~~~l~~~~~d~~i~~-wd~~~~~~~~~-~~~~~~i~~~~~~~~~~~l~~~  244 (343)
                      ++|++.+  ..++++..++ ..+ -++.....+.. ...+..+.++.|-.+..++++-
T Consensus       176 v~ws~kg--kq~v~~~g~~-~q~k~~i~~~~~~~~p~~~~~~v~sI~WL~~~~F~vvy  230 (381)
T d1xipa_         176 VLLKDRS--FQSFAWRNGE-MEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVF  230 (381)
T ss_dssp             EEETTSC--EEEEEEETTE-EEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred             EEEeCCc--EEEEEeCCCc-eeeccCCCCccccCCCcCCCcceeEEEEecCceEEEEE
Confidence            8888777  6666653322 111 11111110000 0123457888888776666553

>d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nucleoporin domain
family: Nucleoporin domain
domain: Nucleoporin NUP159
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.03  E-value=0.55  Score=36.44  Aligned_cols=176  Identities=9%  Similarity=0.025  Sum_probs=100.2

Q ss_pred             cceEEEEECCCCCEEEEecCCeEEEEEccCC-----------ceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEee
Q psy10867         79 GRISSMQASPDAAYIAVSIETKLHMWQISSG-----------RLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQ  147 (343)
Q Consensus        79 ~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~-----------~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd  147 (343)
                      ....-++.++...+++++....+.|....+-           ......  .-..|..++|+.+  .++.. .++.+..++
T Consensus        37 ~~~~LLAVsn~~GLl~aa~~~~l~V~~t~~l~~~~~~~~~~~~~~~~~--~ip~v~~vafs~d--~l~v~-~~~~l~~~~  111 (381)
T d1xipa_          37 ASLQNLDISNSKSLFVAASGSKAVVGELQLLRDHITSDSTPLTFKWEK--EIPDVIFVCFHGD--QVLVS-TRNALYSLD  111 (381)
T ss_dssp             SCCBCEEEETTTTEEEEEETTEEEEEEHHHHHHHHHSSSCCCCCSEEE--ECTTEEEEEEETT--EEEEE-ESSEEEEEE
T ss_pred             cccceEEEeCCCCEEEEECCCEEEEEEHHHHHHHhhccCCCCcceecc--CCCCeEEEEeeCC--EEEEE-eCCCEEEEE
Confidence            4566778887766777755556778774311           111111  1135888999744  45444 346677777


Q ss_pred             cCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEE-----
Q psy10867        148 LSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLS-----  222 (343)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~-----  222 (343)
                      .........                      ...-..++..+.++|.    .++....++.+.++++..++....     
T Consensus       112 ~~~l~~~~~----------------------~~~~~~~~~~~~~~p~----~~~l~~~~~~~~~~~l~~~~~~~~~~~v~  165 (381)
T d1xipa_         112 LEELSEFRT----------------------VTSFEKPVFQLKNVNN----TLVILNSVNDLSALDLRTKSTKQLAQNVT  165 (381)
T ss_dssp             SSSTTCEEE----------------------EEECSSCEEEEEECSS----EEEEEETTSEEEEEETTTCCEEEEEESEE
T ss_pred             eeccccccc----------------------cccccccccceecCCc----eeEEEecCCCEEEEEeccCccccccCCcc
Confidence            766432211                      1122345677777774    355666788999999988764322     


Q ss_pred             -eecCCcEEEEEEcCCCCEEEEEcCCCcEEEE-EeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEE
Q psy10867        223 -LILDTRLTCVAFDGTEDNIYMGTSEGVIKSF-CLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSS  297 (343)
Q Consensus       223 -~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~-d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~  297 (343)
                       +.-.....+++|++.++.++++..++ ..+- ++....   .        +.........|.++.|-.+..++++-
T Consensus       166 ~~~~~~~~~~v~ws~kgkq~v~~~g~~-~q~k~~i~~~~---~--------~~~p~~~~~~v~sI~WL~~~~F~vvy  230 (381)
T d1xipa_         166 SFDVTNSQLAVLLKDRSFQSFAWRNGE-MEKQFEFSLPS---E--------LEELPVEEYSPLSVTILSPQDFLAVF  230 (381)
T ss_dssp             EEEECSSEEEEEETTSCEEEEEEETTE-EEEEEEECCCH---H--------HHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred             eEEecCCceEEEEeCCcEEEEEeCCCc-eeeccCCCCcc---c--------cCCCcCCCcceeEEEEecCceEEEEE
Confidence             22356788888988888888874322 2211 111110   0        01111233467888888776666644

>d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Kelch motif
family: Kelch motif
domain: Kelch-like ECH-associated protein 1, KEAP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.76  E-value=0.52  Score=34.77  Aligned_cols=24  Identities=8%  Similarity=0.127  Sum_probs=16.7

Q ss_pred             cCCCEEEEEeCCC-----cEEEEecccce
Q psy10867        289 ITGITLLSSSADE-----TLKIWHTISRQ  312 (343)
Q Consensus       289 ~~~~~l~s~~~dg-----~i~iwd~~~~~  312 (343)
                      .++++++.|+.++     .|.+||+.+.+
T Consensus       241 ~~~~l~v~GG~~~~~~~~~v~~yd~~~~~  269 (288)
T d1zgka1         241 HQGRIYVLGGYDGHTFLDSVECYDPDTDT  269 (288)
T ss_dssp             ETTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred             ECCEEEEEecCCCCeecceEEEEECCCCE
Confidence            3678888877654     37888988643

>d2hu7a1 b.69.7.2 (A:9-321) Acylamino-acid-releasing enzyme, N-terminal donain {Aeropyrum pernix [TaxId: 56636]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Peptidase/esterase 'gauge' domain
family: Acylamino-acid-releasing enzyme, N-terminal donain
domain: Acylamino-acid-releasing enzyme, N-terminal donain
species: Aeropyrum pernix [TaxId: 56636]

Probab=93.48  E-value=0.78  Score=32.07  Aligned_cols=235  Identities=12%  Similarity=0.061  Sum_probs=118.0

Q ss_pred             CceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEE-CCCCCEEE-E-----ec-CCeEEEEEccCCceEEEeccc
Q psy10867         47 NDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQA-SPDAAYIA-V-----SI-ETKLHMWQISSGRLLATASSH  118 (343)
Q Consensus        47 ~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~-s~~~~~l~-~-----~~-d~~i~v~~~~~~~~~~~~~~~  118 (343)
                      +..++..+...|.+.++-+..++.++...   .+|..... .+.-.++. +     +. -..|++-++........+...
T Consensus        25 ~d~ll~~~~seG~vni~~l~g~~~vkLtk---ePI~~~~~Pk~~ldfi~f~RDV~kGkE~Hai~~~Nlk~~GEE~~i~sp  101 (313)
T d2hu7a1          25 GDKLLVVGFSEGSVNAYLYDGGETVKLNR---EPINSVLDPHYGVGRVILVRDVSKGAEQHALFKVNTSRPGEEQRLEAV  101 (313)
T ss_dssp             TTEEEEEEEETTEEEEEEESSSSCEECCS---SCCSEECEECTTBSEEEEEEECSTTSCCEEEEEEETTSTTCEEECTTS
T ss_pred             CCcEEEEEeccceEEEEEEeCCEEEEEec---ccccCcCCCccCcceEEEEeehhcCcceeeEEEEccCCCCeeeEecCC
Confidence            44566666455999999888887765432   33332211 11112222 1     11 134666666532233344333


Q ss_pred             C-CCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCc
Q psy10867        119 Y-QPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAK  197 (343)
Q Consensus       119 ~-~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  197 (343)
                      . -.|.+++.. +.+..++|+......+|-++.+....-...+             ..-....-....|..+.+-..++ 
T Consensus       102 k~vRI~S~~yd-dk~vvF~Gased~~~LYviegGklrkL~~vP-------------pFsFVtDI~~d~I~G~g~~~g~~-  166 (313)
T d2hu7a1         102 KPMRILSGVDT-GEAVVFTGATEDRVALYALDGGGLRELARLP-------------GFGFVSDIRGDLIAGLGFFGGGR-  166 (313)
T ss_dssp             CSBEEEEEEEC-SSCEEEEEECSSCEEEEEEETTEEEEEEEES-------------SCEEEEEEETTEEEEEEEEETTE-
T ss_pred             ceEEEEEeeec-CceEEEecccCCceEEEEEeCCceeeeccCC-------------CcceEEeccCCeEEEEeeecCCc-
Confidence            2 345566653 4557778888788888888776543221100             00011111234455555554443 


Q ss_pred             eEEEEeeC-CCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcC---CCcEEEEEeecccccccccccCCCCCC
Q psy10867        198 SRVASVSH-DRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTS---EGVIKSFCLRQVPRTRDHHIQDSTSNP  273 (343)
Q Consensus       198 ~~l~~~~~-d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~---d~~i~i~d~~~~~~~~~~~~~~~~~~~  273 (343)
                      .-++++.- .|.+++++...|..          +...+.+..+. +++-.   .....-+|++.....+. .    -+-.
T Consensus       167 ~sfF~adl~SG~lri~tpkeGS~----------~~ay~~~gnKV-~sdyEt~gEsywit~D~~s~~yerv-e----~P~k  230 (313)
T d2hu7a1         167 VSLFTSNLSSGGLRVFDSGEGSF----------SSASISPGMKV-TAGLETAREARLVTVDPRDGSVEDL-E----LPSK  230 (313)
T ss_dssp             EEEEEEETTTEEEEEECCSSEEE----------EEEEECTTSCE-EEEEEESSCEEEEEECTTTCCEEEC-C----CSSC
T ss_pred             ceEEEEecccCCEEEecCCCCcc----------cceeEccCcee-eeccCCCCceEEEEEecccCceeee-e----cCcc
Confidence            33444444 78888887665543          33334443333 22211   11111224442211100 0    0011


Q ss_pred             cccc-ccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeec
Q psy10867        274 DFIG-HEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTI  317 (343)
Q Consensus       274 ~~~~-~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~  317 (343)
                      .+.. ..-.|+-+-+.|++++++.+-.||.=+++.  +|+.+.+.
T Consensus       231 d~~sy~p~~I~~~~Y~Pdd~L~iiakrdG~s~lF~--nGk~in~p  273 (313)
T d2hu7a1         231 DFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFI--DGERVEAP  273 (313)
T ss_dssp             HHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEE--TTEEECCC
T ss_pred             cceeecceEEEeeeeCCCCcEEEEEecCCchheee--cceEecCC
Confidence            1111 223566777999999989999999999986  45555443

>d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Kelch motif
family: Kelch motif
domain: Kelch-like ECH-associated protein 1, KEAP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.43  E-value=1.4  Score=32.24  Aligned_cols=131  Identities=14%  Similarity=0.126  Sum_probs=58.9

Q ss_pred             CeEEEEecCCceEEEE--EecCCCCcceEEEEeCCceEEEEEcC---------CCeEEEEeCCCcccceecc--cCCcce
Q psy10867         15 GAISVWEPKGGTLLMS--YKGASVLSPHSMCLLGNDYVLGVEKG---------KPMIQAWPVNSQEKAQLRL--ICPGRI   81 (343)
Q Consensus        15 g~i~iwd~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~~~~~---------~~~i~iw~~~~~~~~~~~~--~~~~~v   81 (343)
                      ..+.+||+.+++-...  +....  .-.+++.. ++.+++.|..         -..+.+||..+......-.  .....-
T Consensus        19 ~~~~~yd~~t~~W~~~~~~p~~R--~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~w~~~~~~p~~r~~~   95 (288)
T d1zgka1          19 SYLEAYNPSNGTWLRLADLQVPR--SGLAGCVV-GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRI   95 (288)
T ss_dssp             CCEEEEETTTTEEEECCCCSSCC--BSCEEEEE-TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTC
T ss_pred             ceEEEEECCCCeEEECCCCCCcc--ceeEEEEE-CCEEEEEeCcccCCCCccccchhhhcccccccccccccccceecce
Confidence            5688999988754332  32222  22333333 4445444331         1356788877655442211  111111


Q ss_pred             EEEEECCCCCEEEE-ecC-----CeEEEEEccCCceEEEecccCCC-eEEEEEecCCCEEEEecCC-----CeEEEeecC
Q psy10867         82 SSMQASPDAAYIAV-SIE-----TKLHMWQISSGRLLATASSHYQP-ITIVKWSADSNFIVTGGED-----GTICVWQLS  149 (343)
Q Consensus        82 ~~~~~s~~~~~l~~-~~d-----~~i~v~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~s~~~d-----g~i~iwd~~  149 (343)
                      .++.+  ++++++. +.+     .....++..+............. -.++... ++..++.|+.+     ..+..||..
T Consensus        96 ~~~~~--~~~i~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~~~~~GG~~~~~~~~~~~~~d~~  172 (288)
T d1zgka1          96 GVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL-NRLLYAVGGFDGTNRLNSAECYYPE  172 (288)
T ss_dssp             EEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEECCBCSSCBCCCEEEEETT
T ss_pred             ecccc--ceeeEEecceecccccceeeeeccccCccccccccccccccceeeee-eecceEecCcccccccceEEEeecc
Confidence            22222  5555554 322     24666777665433221111110 1122222 44555555543     346667766


Q ss_pred             cc
Q psy10867        150 RL  151 (343)
Q Consensus       150 ~~  151 (343)
                      +.
T Consensus       173 ~~  174 (288)
T d1zgka1         173 RN  174 (288)
T ss_dssp             TT
T ss_pred             cc
Confidence            54

>d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Soluble quinoprotein glucose dehydrogenase
family: Soluble quinoprotein glucose dehydrogenase
domain: Soluble quinoprotein glucose dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=91.24  E-value=2.8  Score=33.28  Aligned_cols=102  Identities=15%  Similarity=0.140  Sum_probs=61.4

Q ss_pred             cceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceec--------ccCCcceEEEEECCC---CCEEEE--e------cC
Q psy10867         38 SPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLR--------LICPGRISSMQASPD---AAYIAV--S------IE   98 (343)
Q Consensus        38 ~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~--------~~~~~~v~~~~~s~~---~~~l~~--~------~d   98 (343)
                      ..++|+|.||++++++-...|.|++++..+++.....        .........++|+|+   ..++..  .      .+
T Consensus        28 ~P~~la~~pdg~llVter~~G~i~~v~~~~g~~~~i~~~~~~~~~~~ge~GLLgia~~Pdf~~n~~iYvsyt~~~~~~~~  107 (450)
T d1crua_          28 KPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTD  107 (450)
T ss_dssp             SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--
T ss_pred             CceEEEEeCCCeEEEEEecCCEEEEEECCCCcEeecccCCccccccCCCCceeeEEeCCCCccCCEEEEEEecCCCCCcc
Confidence            7789999999999999865599999987776543211        122356789999985   233332  1      01


Q ss_pred             ----C--eEEEEEccCCce--------EEEec-ccCCCeEEEEEecCCCEEEEecC
Q psy10867         99 ----T--KLHMWQISSGRL--------LATAS-SHYQPITIVKWSADSNFIVTGGE  139 (343)
Q Consensus        99 ----~--~i~v~~~~~~~~--------~~~~~-~~~~~v~~~~~~~~~~~l~s~~~  139 (343)
                          +  .+..+.......        +..+. ........|.|.||+.+.++.+.
T Consensus       108 ~~~~~~~~v~~~~~~~~~~~~~~~~~i~~~~p~~~~H~gg~l~fgpDG~LYvs~Gd  163 (450)
T d1crua_         108 KELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD  163 (450)
T ss_dssp             CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred             cccccceEEEeeecccccccccceEEEeecccccccccccceeEcCCCCEEEEecC
Confidence                1  233344333211        11111 11233578999999987777664

>d1suua_ b.68.10.1 (A:) DNA gyrase A C-terminal domain {Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: GyrA/ParC C-terminal domain-like
family: GyrA/ParC C-terminal domain-like
domain: DNA gyrase A C-terminal domain
species: Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]

Probab=87.79  E-value=4.1  Score=30.28  Aligned_cols=192  Identities=11%  Similarity=0.078  Sum_probs=103.9

Q ss_pred             EEEEEcCCCeEEEEeCCCcccc---------eecccCCcceEEEEECCCCCEEEEecCCeEE---EEEccCCce------
Q psy10867         50 VLGVEKGKPMIQAWPVNSQEKA---------QLRLICPGRISSMQASPDAAYIAVSIETKLH---MWQISSGRL------  111 (343)
Q Consensus        50 ~~~~~~~~~~i~iw~~~~~~~~---------~~~~~~~~~v~~~~~s~~~~~l~~~~d~~i~---v~~~~~~~~------  111 (343)
                      +++.-+.+|.++--...+.+..         ..+..+..-+..+..+....+|+.+..|.++   +|++.....      
T Consensus         3 vvv~ls~~GyiKR~~~~~~~~q~rg~~g~~~~~~k~~D~v~~~~~~~t~d~ll~fT~~G~~~~i~~~~ip~~~~~~~G~~   82 (304)
T d1suua_           3 IVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDGDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRASKGQN   82 (304)
T ss_dssp             EEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC-------CB
T ss_pred             EEEEEECCCeEEEeeHHHHhhccCCCCCcccccccCCCEEEEEEEecCCCeEEEEechHhhcChhhhhcccccccccccc
Confidence            3445555588886655433211         1122333334445555555666667777544   444443221      


Q ss_pred             EEEe-c-ccCCCeEEEEEec---CCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccce
Q psy10867        112 LATA-S-SHYQPITIVKWSA---DSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPV  186 (343)
Q Consensus       112 ~~~~-~-~~~~~v~~~~~~~---~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  186 (343)
                      +..+ . .....+..+--.+   ...+++..+.+|.|+--.+........-.               .....+. ....+
T Consensus        83 i~~l~~l~~~e~i~~~~~~~~~~~~~~l~~~T~~G~iKr~~l~~f~~~~~~~---------------~~a~kL~-~~D~l  146 (304)
T d1suua_          83 ISELINLGDQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRG---------------VIVIKLN-DKDFV  146 (304)
T ss_dssp             GGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----C---------------EECBCCC-TTCCE
T ss_pred             cceeeeeccccccccccccccccccceEEEEEehhhhhhcccchhhcccccc---------------ceeeccc-chhhc
Confidence            1111 1 1123444433222   35578888999999998876542211100               0111112 23344


Q ss_pred             EEEEeecCCCceEEEEeeCCCeEEEEecCCCce-------EEEe--ecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeec
Q psy10867        187 THVTLSKLGAKSRVASVSHDRTCKIFDLCTGED-------LLSL--ILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQ  257 (343)
Q Consensus       187 ~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~-------~~~~--~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~  257 (343)
                      -.+......  ..++..+..|....++...-..       +..+  .....+..+...+++.++++.+.+|..+...+..
T Consensus       147 v~v~~~~~~--~~v~~~t~~G~~lrf~~~~v~~~gr~a~Gv~~i~L~~~d~v~~~~~~~~~~~ll~iT~~G~gKr~~~~e  224 (304)
T d1suua_         147 TSAEIVFKD--EKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKEGDLFVKVLSVKENPYLLIVSENGYGKRLNMSK  224 (304)
T ss_dssp             EEEEEECTT--CEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCTTCCEEEEEECTTCSEEEEEETTSEEEEEEGGG
T ss_pred             ccccccccc--ceeEeeccccceeeeccccccccCccccceeeecccccccceeeeeccCCceEEEEecCCceEEccchh
Confidence            445555444  5677788888888887754222       2222  2345577777778888999999999999998876


Q ss_pred             cc
Q psy10867        258 VP  259 (343)
Q Consensus       258 ~~  259 (343)
                      ..
T Consensus       225 ~~  226 (304)
T d1suua_         225 IS  226 (304)
T ss_dssp             SC
T ss_pred             hh
Confidence            54

>d1wp5a_ b.68.10.1 (A:) Topoisomerase IV subunit A, ParC, C-terminal domain {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: GyrA/ParC C-terminal domain-like
family: GyrA/ParC C-terminal domain-like
domain: Topoisomerase IV subunit A, ParC, C-terminal domain
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=82.86  E-value=7.7  Score=29.04  Aligned_cols=204  Identities=9%  Similarity=0.060  Sum_probs=110.0

Q ss_pred             CCCCEEEE-ecCCeEEEEEccCC----ceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEe---ecCccceeeeeec
Q psy10867         88 PDAAYIAV-SIETKLHMWQISSG----RLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVW---QLSRLICKQTVAF  159 (343)
Q Consensus        88 ~~~~~l~~-~~d~~i~v~~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw---d~~~~~~~~~~~~  159 (343)
                      |+...+++ +.+|.|+--.+.+-    ..-..++. .+.+..+........|+.-+..|.++.-   ++.......    
T Consensus         3 ~~E~v~v~lS~~GyiKR~~~~~~~~~~~~~~~~k~-~D~v~~~~~~~t~d~ll~fT~~Grvy~l~v~eiP~~~~~s----   77 (323)
T d1wp5a_           3 ASEDVIVTVTKDGYVKRTSLRSYAASNGQDFAMKD-TDRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKD----   77 (323)
T ss_dssp             SCCEEEEEEETTCEEEEEEHHHHHHTTTCCCCCCT-TCCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTS----
T ss_pred             CCCCEEEEEeCCCeEEEeeHHHhhhcCCCCCcccC-CceEEEEEEEcCCCEEEEEecCCEEEEEeeccCccccccc----
Confidence            44555554 78888886665421    11111222 3345555444455556666667776544   443221100    


Q ss_pred             CCCCCCCCccccccceee---eecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCc------eE--EEeecCCc
Q psy10867        160 GIPGSSGKGVTGLTEPLH---VKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGE------DL--LSLILDTR  228 (343)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~---~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~------~~--~~~~~~~~  228 (343)
                                  ...++.   .+......+..+...+.....+++..+..|.++..++....      ..  ..+.....
T Consensus        78 ------------~G~pi~~ll~l~~~e~ii~~~~~~~~~~~~~l~~~Tk~G~iKr~~l~~f~~~~~~~g~~~i~L~~~D~  145 (323)
T d1wp5a_          78 ------------LGQHIANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKNDDQ  145 (323)
T ss_dssp             ------------CCEEGGGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCTTCC
T ss_pred             ------------ccccceeeecccCCcceEEEeeccccccceeEEEEeehhheeeccHHHhhhhhccchhhhcccccccc
Confidence                        001111   11112222333333332222688889999999998875322      12  22234556


Q ss_pred             EEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEec
Q psy10867        229 LTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHT  308 (343)
Q Consensus       229 i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~  308 (343)
                      +..+....+...++.++..|.+..|+..........  ..+.....+.....-|......+++..|+..+..|..+.-.+
T Consensus       146 l~~v~~~~~~~~i~l~t~~G~~lrf~~~~vr~~gr~--a~GV~~ikL~~~D~vv~~~~~~~~~~~ll~~T~~G~gKr~~~  223 (323)
T d1wp5a_         146 VVDVHLTDGMNELFLVTHNGYALWFDESEVSIVGVR--AAGVKGMNLKEGDYIVSGQLITSKDESIVVATQRGAVKKMKL  223 (323)
T ss_dssp             EEEEEEECSCSEEEEEETTSEEEEEEGGGSCBCCSS--CCCEECCCCCTTCCEEEEEEECCTTCEEEEEETTSEEEEEEG
T ss_pred             ccceeccCCCeEEEEEEecceeeEeecccccccCcc--cccccccccccccccchhhhccccccceeeeeeeheeecccc
Confidence            777888877888999999999999988764332110  111112233322233434455567778899999998888665


Q ss_pred             cc
Q psy10867        309 IS  310 (343)
Q Consensus       309 ~~  310 (343)
                      ..
T Consensus       224 ~e  225 (323)
T d1wp5a_         224 TE  225 (323)
T ss_dssp             GG
T ss_pred             hh
Confidence            43

>d1jtdb_ b.69.5.2 (B:) beta-lactamase inhibitor protein-II, BLIP-II {Streptomyces exfoliatus [TaxId: 1905]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: RCC1/BLIP-II
family: beta-lactamase inhibitor protein-II, BLIP-II
domain: beta-lactamase inhibitor protein-II, BLIP-II
species: Streptomyces exfoliatus [TaxId: 1905]

Probab=80.67  E-value=8.1  Score=27.87  Aligned_cols=87  Identities=13%  Similarity=0.213  Sum_probs=45.5

Q ss_pred             eEEEEeCCC-cccceecccCCcceEEEEECCCCCEEEEecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEe
Q psy10867         59 MIQAWPVNS-QEKAQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTG  137 (343)
Q Consensus        59 ~i~iw~~~~-~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~  137 (343)
                      +|..|--.. .............|..++.- +...++.. ||.|..|-....-.+..-......+..+..- +...++. 
T Consensus         5 sv~~WG~~~~~~~~~~~~~~~~~i~~va~G-~~h~~al~-dG~v~~wG~N~~GQlG~~~~~~~~v~~v~~G-~~~~~al-   80 (273)
T d1jtdb_           5 SVVAWGGNNDWGEATVPAEAQSGVDAIAGG-YFHGLALK-GGKVLGWGANLNGQLTMPAATQSGVDAIAAG-NYHSLAL-   80 (273)
T ss_dssp             EEEEESSCCSSSTTCCCGGGSSSEEEEEEC-SSEEEEEE-TTEEEEEECCTTSTTSCCGGGGSCCCEEEEC-SSEEEEE-
T ss_pred             EEEEECCCCCCCceeccccCCCCcEEEEcc-CCEEEEEE-CCEEEEEeCCCCCceeeeecccccceEEecC-CCceeee-
Confidence            577774322 22222222344568888763 33344444 8999999765543322222233445555542 2222332 


Q ss_pred             cCCCeEEEeecCc
Q psy10867        138 GEDGTICVWQLSR  150 (343)
Q Consensus       138 ~~dg~i~iwd~~~  150 (343)
                       .||.+..|....
T Consensus        81 -~dg~v~~wG~~~   92 (273)
T d1jtdb_          81 -KDGEVIAWGGNE   92 (273)
T ss_dssp             -ETTEEEEEECCT
T ss_pred             -eeeeeeccCCCc
Confidence             478999997644

>d2hu7a1 b.69.7.2 (A:9-321) Acylamino-acid-releasing enzyme, N-terminal donain {Aeropyrum pernix [TaxId: 56636]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Peptidase/esterase 'gauge' domain
family: Acylamino-acid-releasing enzyme, N-terminal donain
domain: Acylamino-acid-releasing enzyme, N-terminal donain
species: Aeropyrum pernix [TaxId: 56636]

Probab=80.15  E-value=7.4  Score=27.11  Aligned_cols=208  Identities=15%  Similarity=0.105  Sum_probs=106.6

Q ss_pred             eEEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEE-eCC-ceEEEEE-----cCCCeEEEEeCCC-cccceecccC
Q psy10867          6 EVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCL-LGN-DYVLGVE-----KGKPMIQAWPVNS-QEKAQLRLIC   77 (343)
Q Consensus         6 ~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~-~~~-~~~~~~~-----~~~~~i~iw~~~~-~~~~~~~~~~   77 (343)
                      .+++.+...|.+.++-+..++.++--+.    +|..... .+. +.+..+-     .....|.+-++.. ++..+.-...
T Consensus        27 ~ll~~~~seG~vni~~l~g~~~vkLtke----PI~~~~~Pk~~ldfi~f~RDV~kGkE~Hai~~~Nlk~~GEE~~i~spk  102 (313)
T d2hu7a1          27 KLLVVGFSEGSVNAYLYDGGETVKLNRE----PINSVLDPHYGVGRVILVRDVSKGAEQHALFKVNTSRPGEEQRLEAVK  102 (313)
T ss_dssp             EEEEEEEETTEEEEEEESSSSCEECCSS----CCSEECEECTTBSEEEEEEECSTTSCCEEEEEEETTSTTCEEECTTSC
T ss_pred             cEEEEEeccceEEEEEEeCCEEEEEecc----cccCcCCCccCcceEEEEeehhcCcceeeEEEEccCCCCeeeEecCCc
Confidence            3566666678888887776665553322    2222211 111 2333222     1222455555542 2222222223


Q ss_pred             CcceEEEEECCCCCEEEE-ecCCeEEEEEccCCceEE--Eeccc-------CCCeEEEEE-ecCCCEEEEecC-CCeEEE
Q psy10867         78 PGRISSMQASPDAAYIAV-SIETKLHMWQISSGRLLA--TASSH-------YQPITIVKW-SADSNFIVTGGE-DGTICV  145 (343)
Q Consensus        78 ~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~--~~~~~-------~~~v~~~~~-~~~~~~l~s~~~-dg~i~i  145 (343)
                      +-+|.+++.. |.+...+ +......+|-++.|++..  .+.+.       .+-|..+.+ .++..-++++.- .|.+++
T Consensus       103 ~vRI~S~~yd-dk~vvF~Gased~~~LYviegGklrkL~~vPpFsFVtDI~~d~I~G~g~~~g~~~sfF~adl~SG~lri  181 (313)
T d2hu7a1         103 PMRILSGVDT-GEAVVFTGATEDRVALYALDGGGLRELARLPGFGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRV  181 (313)
T ss_dssp             SBEEEEEEEC-SSCEEEEEECSSCEEEEEEETTEEEEEEEESSCEEEEEEETTEEEEEEEEETTEEEEEEEETTTEEEEE
T ss_pred             eEEEEEeeec-CceEEEecccCCceEEEEEeCCceeeeccCCCcceEEeccCCeEEEEeeecCCcceEEEEecccCCEEE
Confidence            3567777765 2233333 566778888888776533  23221       122333333 222233444443 566666


Q ss_pred             eecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEee----CCCeEEEEecCCCceEE
Q psy10867        146 WQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVS----HDRTCKIFDLCTGEDLL  221 (343)
Q Consensus       146 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~----~d~~i~~wd~~~~~~~~  221 (343)
                      ++...                                 +.++.....+..  + ++++.    +..-| -+|+++++.-.
T Consensus       182 ~tpke---------------------------------GS~~~ay~~~gn--K-V~sdyEt~gEsywi-t~D~~s~~yer  224 (313)
T d2hu7a1         182 FDSGE---------------------------------GSFSSASISPGM--K-VTAGLETAREARLV-TVDPRDGSVED  224 (313)
T ss_dssp             ECCSS---------------------------------EEEEEEEECTTS--C-EEEEEEESSCEEEE-EECTTTCCEEE
T ss_pred             ecCCC---------------------------------CcccceeEccCc--e-eeeccCCCCceEEE-EEecccCceee
Confidence            66554                                 344444555543  2 33332    22223 45777665432


Q ss_pred             E-ee-------cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEe
Q psy10867        222 S-LI-------LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCL  255 (343)
Q Consensus       222 ~-~~-------~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~  255 (343)
                      . +.       ..-.|.-+-+.|++++++.+-.||.=.+|.-
T Consensus       225 ve~P~kd~~sy~p~~I~~~~Y~Pdd~L~iiakrdG~s~lF~n  266 (313)
T d2hu7a1         225 LELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID  266 (313)
T ss_dssp             CCCSSCHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred             eecCcccceeecceEEEeeeeCCCCcEEEEEecCCchheeec
Confidence            1 11       1345777889999999999999999998864