Diaphorina citri psyllid: psy1087

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450----
MLHSIVHSTLNQVFQSVANLIKFCDDYFLYNNNDEVNEELAKECVAQVEQADKEKHLYQDAFLTTFRTFKTPLEIIKKLIDRYHKFVSSSEVQKQRAARETFSFLVQVVSELTVYELDDNLVKYLTDFIYQLLSSGHFKPARGLRVKLLAKYDCKNNESVKNEILSSLNVYTTHYTLLAFKSEHIAEQMTLLDSDLFIKIEIPEVLAWIEQQNEEKSPNLTRARTRILEQNEARDREKYVVKFIKIMKHLRKMNNFNSYLGLLSALDSAPIRRLEWQKHITEGLKEYCALIDSTSSFRAYRQALAETQPPCIPYIGLVLQDLTFVHIGNPHLLPCNELPPHVQYKNVINFSKRRQQFNIVQNMKRFRSGVHKFPRHDRIIEFFSNFDDFLSEEAMARTRILEQNEARDREKYVVKFIKIMKHLRKMNNFNSYLGLLSALKTCFIYQTAILLNKY
cccccccccHHHHHHHHcccccccccccccccccccccccHHHHHHHHcccccccHHHHHHHHHHccccccHHHHHHHHHHHHccccccHHHHHHHHHcccEEEEEEEccccccccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHccccccccHHHcccccccccccccccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHccccccccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHcccccccccccccccHHHHHHHHHHHcccHHHHHHHHHHHccccccccccHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHcccccccHHHHHHHHHHHHcHHcccHHHHHHHHHHHHcccccccccccccccccccccccHHHHHccccc
*******STLNQVFQSVANLIKFCDDYFLYNNNDEVNEELAKECVAQVEQADKEKHLYQDAFLTTFRTFKTPLEIIKKLIDRYHKFVSSSEVQKQRAARETFSFLVQVVSELTVYELDDNLVKYLTDFIYQLLSSGHFKPARGLRVKLLAKYDCKNNESVKNEILSSLNVYTTHYTLLAFKSEHIAEQMTLLDSDLFIKIEIPEVLAWIEQQNEEKSPNLTRARTRILEQNEARDREKYVVKFIKIMKHLRKMNNFNSYLGLLSALDSAPIRRLEWQKHITEGLKEYCALIDSTSSFRAYRQALAETQPPCIPYIGLVLQDLTFVHIGNPHLLPCNELPPHVQYKNVINFSKRRQQFNIVQNMKRFRSGVHKFPRHDRIIEFFSNFDDFLSEEAMARTRILEQNEARDREKYVVKFIKIMKHLRKMNNFNSYLGLLSALKTCFIYQTAILLNK*
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MLHSIVHSTLNQVFQSVANLIKFCDDYFLYNNNDEVNEELAKECVAQVEQADKEKHLYQDAFLTTFRTFKTPLEIIKKLIDRYHKFVSSSEVQKQRAARETFSFLVQVVSELTVYELDDNLVKYLTDFIYQLLSSGHFKPARGLRVKLLAKYDCKNNESVKNEILSSLNVYTTHYTLLAFKSEHIAEQMTLLDSDLFIKIEIPEVLAWIEQQNEEKSPNLTRARTRILEQNEARDREKYVVKFIKIMKHLRKMNNFNSYLGLLSALDSAPIRRLEWQKHITEGLKEYCALIDSTSSFRAYRQALAETQPPCIPYIGLVLQDLTFVHIGNPHLLPCNELPPHVQYKNVINFSKRRQQFNIVQNMKRFRSGVHKFPRHDRIIEFFSNFDDFLSEEAMARTRILEQNEARDREKYVVKFIKIMKHLRKMNNFNSYLGLLSALKTCFIYQTAILLNKY

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Guanine nucleotide-releasing factor 2 Guanine nucleotide-releasing protein that binds to SH3 domain of Crk. Transduces signals from Crk to activate RAS. Also involved in MAPK activation.confidentO77086
Rap guanine nucleotide exchange factor 1 Guanine nucleotide-releasing protein that binds to SH3 domain of CRK and GRB2/ASH. Transduces signals from CRK to activate RAS.confidentQ13905

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0032317 [BP]regulation of Rap GTPase activityprobableGO:0009894, GO:0019220, GO:0080090, GO:0019222, GO:0048583, GO:0023051, GO:0010646, GO:0043087, GO:0050789, GO:0032318, GO:0031329, GO:0009966, GO:0031323, GO:0030811, GO:0008150, GO:0065007, GO:0065009, GO:0051056, GO:0033121, GO:0033124, GO:0019219, GO:0046578, GO:0050790, GO:0050794, GO:0051174, GO:0032487, GO:0051171, GO:0009118, GO:0051336, GO:1900542, GO:0006140
GO:0003674 [MF]molecular_functionprobable
GO:0007165 [BP]signal transductionprobableGO:0044700, GO:0051716, GO:0050896, GO:0009987, GO:0050794, GO:0008150, GO:0065007, GO:0044763, GO:0023052, GO:0007154, GO:0050789, GO:0044699
GO:0005575 [CC]cellular_componentprobable

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3KSY, chain A
Confidence level:very confident
Coverage over the Query: 22-408
View the alignment between query and template
View the model in PyMOL
Template: 3QXL, chain A
Confidence level:very confident
Coverage over the Query: 401-446
View the alignment between query and template
View the model in PyMOL