Diaphorina citri psyllid: psy10927

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------86
MDGNLRNIVSGFFDFGGFDFGGFGGAQQGGAGGQRKTSKDTAYYDLLGVKPGCSDDELKKAYRTMARKYHPDRDPKNEDKQQKNRKGKDVVHTLYVTMEELYSGAVRKLALEKNVICSVCEGKLFVTCLGKTQGLLGGRAHCLKFVSTEEETAQVYGSSLFDHIEILIPRFYPQFKEINKAYDVLSNPEKRRVYDQGGEEAINQGGFGGYHRRGQQQQKNRKGKDVVHTLYVTMEELYSGAVRKLALEKNVICSVCEGRGGKSKIVEKCSTCKGSGMTVQVQQIGPGMIQQVQHVCSDCKGQGERINPKDKRVGNNLQMTQNIDLVEALCGFQRYIKTLDGRVIMIEVPGGRGGKSKIVEKCSTCKGSGMTVQVQQIGPGMIQQVQHVCSDCKGQGERINPKDKCRTCAGKKFSCQAKRPNMVKETTFYDILGVKPNCTQDELKKAYRKLALKYHPDKNPNEGEKFKQISMAYEVLSNPEKRELYDQGGYQGGRLWGRRRRLLLPNGYIRDVHGWQFGGRSAAKGEAIKEGGSGGGGGGFSSPMDIFEMFMGGSLGGGRRRRERKGKDVVHQLTVSLEDLYRGTVKKLQLEKNVICDKCEGRGGKKGAAESCPGCRGTGMTVTVQQFGPGMIQQIQTVCSECRGQGSRINPKDRCKTCNGKKTVRDRKILEVHIDKGMIDQQKIVFNGEGDQEPGLEHGDIIIVLEEKPHPVFKRSGNNLIIRPYEIALVEALCGFRRPIKTLDDRDIIISAAPGEVMKHSDIKMVVGEGMPTYKDPFEKGNLIIVFSVKFPDVIPVDKVPAIEACLPPRPKVTIPENGEEVVLETMDPEKERAQNAYRQAHQEDEDQGPSRVQCATN
cccccccccccccccccccccccccccccccccccccccccccEEEccccccccHHHHHHHHHHHHHHHccccccccHHHHHHHccccccEEccccHHHHHHcccccHHcccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHcccHHHHHHHHHHcHHHccccccccccccccccccccccccEEEEEEEEHHHHHcccEEEEEEcccccccccccccccccccccccccccccEEEEEEECcccCEEEEEEcccccccccEEEcccccccccccEEEEEEEEEEEEcccccEEEEccccEEEEcccccccccccccccccccccccCEEEEEECcccCEEEEEEcccccccccCEEcccccccccccccEECcccccccccccccEEEccccccccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHccccHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHccccccccccccccccccEEEEEEEEHHHHHccEEEEEEEcccccccccccccccccccccccccccccEEEEEEECccccEEEEEEcccccccccEEEccccccccccccCEEEEEEEEEEEEccccccccEEEEccccccccccccccEEEEEEEccccccEECcccEEEEEEcccHHHHccccEEEEEccccccEEEEEccccccccccEEEEccccccccccccccccEEEEEEEEcccccccccHHHHHHHccccccccccccccEEEEEcccHHHHHHHHHHcccccccccccccccccccc
*****RNIVSGFFDFGGFDFGGFGG***************TAYYDLLGVKPGCSDDELKKAYRTMARKY*******************DVVHTLYVTMEELYSGAVRKLALEKNVICSVCEGKLFVTCLGKTQGLLGGRAHCLKFVSTEEETAQVYGSSLFDHIEILIPRFYPQFKEINKAYDVLSNPEKRRVYDQGGEEAI**********************DVVHTLYVTMEELYSGAVRKLALEKNVICSVCEGRGGK*KIVEKCSTCKGSGMTVQVQQIGPGMIQQVQHVCSDCKGQGERINPKDKRVGNNLQMTQNIDLVEALCGFQRYIKTLDGRVIMIEVPGGRGGKSKIVEKCSTCKGSGMTVQVQQIGPGMIQQVQHVCSDCKGQGERINPKDKCRTCAGKKFSCQAKRPNMVKETTFYDILGVKPNCTQDELKKAYRKLALKYHPDKNPNEGEKFKQISMAYEVLSNPEKRELYDQGGYQGGRLWGRRRRLLLPNGYIRDVHGWQFGGRSAAKGEAI*********GGFSSPMDIFE********************VVHQLTVSLEDLYRGTVKKLQLEKNVICDKCEGRGG**G***SCPGCRGTGMTVTVQQFGPGMIQQIQTVCSECRGQGSRINPKDRCKTCNGKKTVRDRKILEVHIDKGMIDQQKIVFNGEGDQEPGLEHGDIIIVLEEKPHPVFKRSGNNLIIRPYEIALVEALCGFRRPIKTLDDRDIIISAAPGEVMKHSDIKMVVGEGMPTYKDPFEKGNLIIVFSVKFPDVIPVDKVPAIEACLP**************VL**********************************
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MDGNLRNIVSGFFDFGGFDFGGFGGAQQGGAGGQRKTSKDTAYYDLLGVKPGCSDDELKKAYRTMARKYHPDRDPKNEDKQQKNRKGKDVVHTLYVTMEELYSGAVRKLALEKNVICSVCEGKLFVTCLGKTQGLLGGRAHCLKFVSTEEETAQVYGSSLFDHIEILIPRFYPQFKEINKAYDVLSNPEKRRVYDQGGEEAINQGGFGGYHRRGQQQQKNRKGKDVVHTLYVTMEELYSGAVRKLALEKNVICSVCEGRGGKSKIVEKCSTCKGSGMTVQVQQIGPGMIQQVQHVCSDCKGQGERINPKDKRVGNNLQMTQNIDLVEALCGFQRYIKTLDGRVIMIEVPGGRGGKSKIVEKCSTCKGSGMTVQVQQIGPGMIQQVQHVCSDCKGQGERINPKDKCRTCAGKKFSCQAKRPNMVKETTFYDILGVKPNCTQDELKKAYRKLALKYHPDKNPNEGEKFKQISMAYEVLSNPEKRELYDQGGYQGGRLWGRRRRLLLPNGYIRDVHGWQFGGRSAAKGEAIKEGGSGGGGGGFSSPMDIFEMFMGGSLGGGRRRRERKGKDVVHQLTVSLEDLYRGTVKKLQLEKNVICDKCEGRGGKKGAAESCPGCRGTGMTVTVQQFGPGMIQQIQTVCSECRGQGSRINPKDRCKTCNGKKTVRDRKILEVHIDKGMIDQQKIVFNGEGDQEPGLEHGDIIIVLEEKPHPVFKRSGNNLIIRPYEIALVEALCGFRRPIKTLDDRDIIISAAPGEVMKHSDIKMVVGEGMPTYKDPFEKGNLIIVFSVKFPDVIPVDKVPAIEACLPPRPKVTIPENGEEVVLETMDPEKERAQNAYRQAHQEDEDQGPSRVQCATN

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
DnaJ homolog subfamily A member 1 Co-chaperone of Hsc70. Seems to play a role in protein import into mitochondria.confidentQ5E954
DnaJ homolog subfamily A member 1 Co-chaperone of Hsc70. Seems to play a role in protein import into mitochondria.confidentP31689
DnaJ homolog subfamily A member 1 Co-chaperone of Hsc70. Seems to play a role in protein import into mitochondria.confidentQ5NVI9

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0050750 [MF]low-density lipoprotein particle receptor bindingprobableGO:0070325, GO:0005102, GO:0003674, GO:0005488, GO:0005515
GO:0070013 [CC]intracellular organelle lumenprobableGO:0005575, GO:0043233, GO:0044464, GO:0031974, GO:0005622, GO:0044446, GO:0043229, GO:0005623, GO:0044424, GO:0043226, GO:0044422
GO:0042769 [BP]DNA damage response, detection of DNA damageprobableGO:0051716, GO:0051606, GO:0050896, GO:0009987, GO:0006974, GO:0006950, GO:0008150, GO:0033554, GO:0044763, GO:0044699
GO:0043232 [CC]intracellular non-membrane-bounded organelleprobableGO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0043228, GO:0044424, GO:0043226
GO:0005829 [CC]cytosolprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0005634 [CC]nucleusprobableGO:0043231, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0044424, GO:0043227, GO:0043226
GO:0042026 [BP]protein refoldingprobableGO:0044267, GO:0006457, GO:0044260, GO:0044238, GO:0019538, GO:0009987, GO:0044237, GO:0043170, GO:0071704, GO:0008150, GO:0008152
GO:0005886 [CC]plasma membraneprobableGO:0005575, GO:0044464, GO:0016020, GO:0071944, GO:0005623

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1NLT, chain A
Confidence level:very confident
Coverage over the Query: 563-793
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Template: 3LZ8, chain A
Confidence level:very confident
Coverage over the Query: 568-597,618-619,662-808
View the alignment between query and template
View the model in PyMOL
Template: 3LZ8, chain A
Confidence level:very confident
Coverage over the Query: 225-373,401,424-452
View the alignment between query and template
View the model in PyMOL
Template: 1NLT, chain A
Confidence level:very confident
Coverage over the Query: 220-387
View the alignment between query and template
View the model in PyMOL
Template: 1XAO, chain A
Confidence level:very confident
Coverage over the Query: 712-829
View the alignment between query and template
View the model in PyMOL
Template: 3BVO, chain A
Confidence level:very confident
Coverage over the Query: 387-487
View the alignment between query and template
View the model in PyMOL