Diaphorina citri psyllid: psy10936

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410
MASEDCMLVTSKEGHFFYKSKSIEPVACGVFLLTDPDKLVEVYFDYLDVPCETGGLVSVNCMLVTSKEGHFFYKSKSVEPVACGVFLLTDPDKLVEVYFDYLDVPCETGGLVSFVDGWELNGQFFPSLEDHEKPLHERFTEFCGTKRIKTVFRSSQNAALIQYRVPTRGKGFSFYVRYHKNPTPCNILLEGLSDVYTLRNYGKSVNCSLTTLYPAQVKVLSGKGESQPFRERTSSPQDNIPCNILLEGLSDVYTLRNYGKSVNCSLTTLYPAQVKVLSLGVGLSNSKIKRNQDVEVETGTLHKADKRKFQYRIGLGRGKGRNRYVLLDTNTTTYSILCGVTTVRLVSSGEFDNAVTVALTPAQVEDLDAASLCDKRGMPDYVQLGGAEGFDLAQLSVVDSICGLDSIPSK
cccccccccccccccEEEECccccccEEEEEEEccccccEEEEcccccccccccccEEEEEEEEECccCEEEEECcccccCEEEEEEEEccccEEEEEEEEEEcccccccEEEEEEEEEEcccccccccccccccccHHHHHccccccccEEEEEccEEEEEEEcccccccEEEEEEEcccccccEEEEccccccEEEEEccccccEEEEEEEcEEEEEEEEccccccccccccccccccccccccccccccEEEEccccccccccccccccEEEEEEccccccccccccccCEEEECcccccccccEEEEEEcccccccccccccccccccCEEEEEccEEEEEEEcccccCEEEEEEEccccccccHHHccccccccccEEEccccccccccEEEEEEcccccccccc
****DCMLVTSKEGHFFYKSKSIEPVACGVFLLTDPDKLVEVYFDYLDVPCETGGLVSVNCMLVTSKEGHFFYKSKSVEPVACGVFLLTDPDKLVEVYFDYLDVPCETGGLVSFVDGWELNGQFFPSLEDHEKPLHERFTEFCGTKRIKTVFRSSQNAALIQYRVPTRGKGFSFYVRYHKNPTPCNILLEGLSDVYTLRNYGKSVNCSLTTLYPAQVKVLSGKG**************NIPCNILLEGLSDVYTLRNYGKSVNCSLTTLYPAQVKVLSLGVGLSNSKIKRNQDVEVETGTLHKADKRKFQYRIGLGRGKGRNRYVLLDTNTTTYSILCGVTTVRLVSSGEFDNAVTVALTPAQVEDLDAASLCDKRGMPDYVQLGGAEGFDLAQLSVVDSICGLD*****
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MASEDCMLVTSKEGHFFYKSKSIEPVACGVFLLTDPDKLVEVYFDYLDVPCETGGLVSVNCMLVTSKEGHFFYKSKSVEPVACGVFLLTDPDKLVEVYFDYLDVPCETGGLVSFVDGWELNGQFFPSLEDHEKPLHERFTEFCGTKRIKTVFRSSQNAALIQYRVPTRGKGFSFYVRYHKNPTPCNILLEGLSDVYTLRNYGKSVNCSLTTLYPAQVKVLSGKGESQPFRERTSSPQDNIPCNILLEGLSDVYTLRNYGKSVNCSLTTLYPAQVKVLSLGVGLSNSKIKRNQDVEVETGTLHKADKRKFQYRIGLGRGKGRNRYVLLDTNTTTYSILCGVTTVRLVSSGEFDNAVTVALTPAQVEDLDAASLCDKRGMPDYVQLGGAEGFDLAQLSVVDSICGLDSIPSK

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

No confident close homologs for annotation transfering were detected in SWISSPROT

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0043231 [CC]intracellular membrane-bounded organelleprobableGO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0044424, GO:0043227, GO:0043226
GO:1901701 [BP]cellular response to oxygen-containing compoundprobableGO:1901700, GO:0051716, GO:0050896, GO:0009987, GO:0008150, GO:0044763, GO:0070887, GO:0042221, GO:0044699
GO:0071495 [BP]cellular response to endogenous stimulusprobableGO:0009719, GO:0050896, GO:0008150
GO:0071407 [BP]cellular response to organic cyclic compoundprobableGO:0051716, GO:0050896, GO:0009987, GO:0008150, GO:0071310, GO:0044763, GO:0044699, GO:0070887, GO:0042221, GO:0010033, GO:0014070

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3KQ4, chain B
Confidence level:confident
Coverage over the Query: 79-212
View the alignment between query and template
View the model in PyMOL
Template: 3KQ4, chain B
Confidence level:probable
Coverage over the Query: 79-272
View the alignment between query and template
View the model in PyMOL
Template: 1SPP, chain B
Confidence level:probable
Coverage over the Query: 4-58
View the alignment between query and template
View the model in PyMOL