Diaphorina citri psyllid: psy11009

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860---
MCIATGASMVGILGKSYNAAKRPQQSTEHSLAENEEIELSIFSAMVDGFVYIFGNILTFLTSKYPSVFLLPKAIRIGNLTFIFGSEFQSEPVVGSGTYLKHKSPIKMNFLSLVLPLLAEEHGKLKFKEAITLALTVGSSLNLYRSITNRGFYIEDYEVSPPGPTLAVAKMFSSLAVQKLLRGSKTFRTLCIHKYRLLTFPSTPVQYSIQKGIPWDIDEALRRRLEKRIYIPLPSKAGREALLKINLKEVKVDPAVDLTHIASQLDGYSGADITNVCRDASMMSMRRKIIGLTPEQIRQIPKEELDLPVSQRDFEEALARCNKSVAREDLENITVERIAPHMSTIGKKLYLKFQKTPIVTLATGPVGLISRDNLKHKSPIKMNFLSLVLPLLAEEHGNNGISNDWHKTSALLVCTANHLIRNSVNLSSVTAIMVEKIMTDKYAEIAESTTIARESSLTGNYDSACLYYQSVLQQINRIVVELRDNEKQKRHWDHINNQLTKEYNEVQRLQSMIRNFGSHNVNDERMLGNSRPNQFDSIFSSDANNSLEPWVTDPDVWPPANDTDPSLYQLHTPKPQQTKTFSKTRKSSIPNKSTPQSNNSTLKRGNKTPANNKKEPNLGYKSVTYDKVLKNSSDNENVKNKTKSNNAQGNSNPTNNSNNNNSNNNPGNSNSHDDKPVMQERRFESYGCDNDLVEMLERDMVQKNPNIRWDDIAELTDAKRLLEEAVVLPMWMPEFFKGIRRPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVCSSTLTSKYRGESEKLVRLLFEMARFYAPSTIFIDEIDSLCSRRGSESEHEASRRVKSELLVQMDGLSSAEDSSKVVMVLAATNFPWEGA
ccccccccHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEcccHHHHcccccccccccccccccccccEECcccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHccccEEEEcccccccccEEEEEcHHHHHccccccccHHHHHHHHHHccccccccccEEEEEEccccccHHHHHHHHHccEEccccccHHHHHHHHHHHcccccccccccHHHHHHHcccccHHHHHHHHHHHHHccHHHHHHcccHHHHcccccccccccccHHHHHHHHHHccccccHHHHHcHHHHHHHHcccccccccccccccccEEEEEcccccccccccccccccccHHHHHHHHHHHHHHcccccccccccccccEEEEccccHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHcccccccccHHHHHHHHccccccccccccccccccHHHHHHHHHHHHccccccccccccccccCEEEEEccccccHHHHHHHHHHHcccEEEEEEccccccccccccHHHHHHHHHHHHHccccEEEEEcHHHHccccccccccHHHHHHHHHHHHHHcccccccccccEEEEEEEcccccccc
*******SMVGILGK*********************IELSIFSAMVDGFVYIFGNILTFLTSKYPSVFLLPKAIRIGNLTFIFGSEFQSEPVVGSGTYLKHKSPIKMNFLSLVLPLLAEEHGKLKFKEAITLALTVGSSLNLYRSITNRGFYIEDYEVSPPGPTLAVAKMFSSLAVQKLLRGSKTFRTLCIHKYRLLTFPSTPVQYSIQKGIPWDIDEALRRRLEKRIYIPLPSKAGREALLKINLKEVKVDPAVDLTHIASQLDGYSGADITNVCRDASMMSMRRKIIGLTPEQI*********LPVSQRDFEEALARCNKSVAREDLENITVERIAPHMSTIGKKLYLKFQKTPIVTLATGPVGLISRDNLKHKSPIKMNFLSLVLPLLAEEHGNNGISNDWHKTSALLVCTANHLIRNSVNLSSVTAIMVEKIMTDKYAEIAESTTIARESSLTGNYDSACLYYQSVLQQINRIVVELRDNEKQKRHWDHINNQLTKEYNEVQRL***I****************************************************************************************************************************************************************************YGCDNDLVEMLERDMVQKNPNIRWDDIAELTDAKRLLEEAVVLPMWMPEFFKGIRRPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVCSSTLTSKYRGESEKLVRLLFEMARFYAPSTIFIDEIDSLC****************SELLVQMDGLSSAEDSSKVVMVLAATNFPW***
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MCIATGASMVGILGKSYNAAKRPQQSTEHSLAENEEIELSIFSAMVDGFVYIFGNILTFLTSKYPSVFLLPKAIRIGNLTFIFGSEFQSEPVVGSGTYLKHKSPIKMNFLSLVLPLLAEEHGKLKFKEAITLALTVGSSLNLYRSITNRGFYIEDYEVSPPGPTLAVAKMFSSLAVQKLLRGSKTFRTLCIHKYRLLTFPSTPVQYSIQKGIPWDIDEALRRRLEKRIYIPLPSKAGREALLKINLKEVKVDPAVDLTHIASQLDGYSGADITNVCRDASMMSMRRKIIGLTPEQIRQIPKEELDLPVSQRDFEEALARCNKSVAREDLENITVERIAPHMSTIGKKLYLKFQKTPIVTLATGPVGLISRDNLKHKSPIKMNFLSLVLPLLAEEHGNNGISNDWHKTSALLVCTANHLIRNSVNLSSVTAIMVEKIMTDKYAEIAESTTIARESSLTGNYDSACLYYQSVLQQINRIVVELRDNEKQKRHWDHINNQLTKEYNEVQRLQSMIRNFGSHNVNDERMLGNSRPNQFDSIFSSDANNSLEPWVTDPDVWPPANDTDPSLYQLHTPKPQQTKTFSKTRKSSIPNKSTPQSNNSTLKRGNKTPANNKKEPNLGYKSVTYDKVLKNSSDNENVKNKTKSNNAQGNSNPTNNSNNNNSNNNPGNSNSHDDKPVMQERRFESYGCDNDLVEMLERDMVQKNPNIRWDDIAELTDAKRLLEEAVVLPMWMPEFFKGIRRPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVCSSTLTSKYRGESEKLVRLLFEMARFYAPSTIFIDEIDSLCSRRGSESEHEASRRVKSELLVQMDGLSSAEDSSKVVMVLAATNFPWEGA

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Vacuolar protein sorting-associated protein 4 Involved in the transport of biosynthetic membrane proteins from the prevacuolar/endosomal compartment to the vacuole. Required for multivesicular body (MVB) protein sorting. Catalyzes the ATP-dependent dissociation of class E VPS proteins from endosomal membranes, such as the disassembly of the ESCRT-III complex.confidentP52917

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0008022 [MF]protein C-terminus bindingprobableGO:0003674, GO:0005488, GO:0005515
GO:0071944 [CC]cell peripheryprobableGO:0005575, GO:0044464, GO:0005623
GO:0044765 [BP]single-organism transportprobableGO:0051234, GO:0006810, GO:0008150, GO:0051179, GO:0044699
GO:0005769 [CC]early endosomeprobableGO:0005737, GO:0043231, GO:0043227, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0005768, GO:0043226
GO:0016192 [BP]vesicle-mediated transportprobableGO:0006810, GO:0008150, GO:0051179, GO:0051234
GO:0043232 [CC]intracellular non-membrane-bounded organelleprobableGO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0043228, GO:0044424, GO:0043226
GO:0048471 [CC]perinuclear region of cytoplasmprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0006996 [BP]organelle organizationprobableGO:0009987, GO:0016043, GO:0008150, GO:0044699, GO:0044763, GO:0071840
GO:0005783 [CC]endoplasmic reticulumprobableGO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0019904 [MF]protein domain specific bindingprobableGO:0003674, GO:0005488, GO:0005515
GO:0042803 [MF]protein homodimerization activityprobableGO:0046983, GO:0003674, GO:0005515, GO:0042802, GO:0005488
GO:0000815 [CC]ESCRT III complexprobableGO:0043234, GO:0005575, GO:0032991, GO:0031090, GO:0043227, GO:0016020, GO:0044464, GO:0043229, GO:0005623, GO:0005737, GO:0044446, GO:0044444, GO:0044440, GO:0043231, GO:0044424, GO:0044425, GO:0005622, GO:0005768, GO:0043226, GO:0044422, GO:0010008
GO:0030496 [CC]midbodyprobableGO:0005575, GO:0044464, GO:0005623
GO:0000910 [BP]cytokinesisprobableGO:0009987, GO:0008150, GO:0044763, GO:0007049, GO:0051301, GO:0022402, GO:0044699
GO:0051260 [BP]protein homooligomerizationprobableGO:0051259, GO:0022607, GO:0071822, GO:0070271, GO:0043933, GO:0006461, GO:0016043, GO:0065003, GO:0044085, GO:0008150, GO:0071840
GO:0016044 [BP]cellular membrane organizationprobableGO:0009987, GO:0016043, GO:0061024, GO:0008150, GO:0071840, GO:0044763, GO:0044699

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2QP9, chain X
Confidence level:very confident
Coverage over the Query: 59-117,132-336
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Template: 3D8B, chain A
Confidence level:very confident
Coverage over the Query: 685-863
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Template: 2CE7, chain A
Confidence level:very confident
Coverage over the Query: 63-117,132-287,305-360,371-410,428-445,457-465
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Template: 3CF2, chain A
Confidence level:very confident
Coverage over the Query: 59-117,132-289,319-326,356-357,375-376,410,438-446,476-484,507-519,531,560-565,699-813,826-863
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Template: 2RPA, chain A
Confidence level:very confident
Coverage over the Query: 440-510
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Template: 3UK6, chain A
Confidence level:confident
Coverage over the Query: 76-287,305-321
View the alignment between query and template
View the model in PyMOL