Diaphorina citri psyllid: psy11017


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140--
MNSRNPPPGVDYEFDYTTQYPVAMVTLEQDKKLEHKKNFTRNPPPGVDYEFDYTTQYPVAMVTLAQDKKLEHMRFELVPATLNETTFWRNYFYRVSLITQYFDTSLSSIQQPVPELWPIQFLTPALVVGLSSNLYQSTYYLD
ccccccccccccccccccccccccccccHHHHHHccccccccccccccccccccccHHHHHHHHHccHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccc
*****PP**VDYEFDYTTQYPVAMVTLEQDKKLEHKKNFTRNPPPGVDYEFDYTTQYPVAMVTLAQDKKLEHMRFELVPATLNETTFWRNYFYRVSLITQYFDTSLSSIQQPVPELWPIQFLTPALVVGLSSNLYQSTYY**
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MNSRNPPPGVDYEFDYTTQYPVAMVTLEQDKKLEHKKNFTRNPPPGVDYEFDYTTQYPVAMVTLAQDKKLEHMRFELVPATLNETTFWRNYFYRVSLITQYFDTSLSSIQQPVPELWPIQFLTPALVVGLSSNLYQSTYYLD

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

No confident close homologs for annotation transfering were detected in SWISSPROT

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0045202 [CC]synapseprobableGO:0005575
GO:0048172 [BP]regulation of short-term neuronal synaptic plasticityprobableGO:0010646, GO:0044057, GO:0031644, GO:0050804, GO:0050789, GO:0048167, GO:0065007, GO:0051239, GO:0023051, GO:0008150, GO:0051969, GO:0065008, GO:0048168, GO:0050794

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 1X3A, chain A
Confidence level:very confident
Coverage over the Query: 8-109
View the alignment between query and template
View the model in PyMOL