Diaphorina citri psyllid: psy11046

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550
MTPLVKYLKNHSRYLPQMSDEKENSEPKSEAPTPEVDEEGYRIRPKEEMWDAEKFYSSSDSDSDDDRDHKIHVEIKPLSANTNQISASVDELRVTAGNLTLSPLSVKERRNSIDINPEVNFSQSPHKKINGLAELNHALMKTMGDSASTEDKPDHVDPTEPPLGLLSGNTPPPSSSTSTEKTTSDSSSTSKYTNLGDLFSEVGEIVPALPPKQTARMTPTLTSSTISLPRPPSRRSEGRGHISPLNSTLTRSESEFKTSGVSTTNSSRGPSPLTIGMSDTIPLAVAFHEIIHSYFRGTDETRCQVKMSGDMMLSFPAGIVSILTSNPSPAQLKFKVSNISHIENMLPNKQLINIEENKLDKSSDSMTCEFNMSALSSLLRKQCEQNPSASYFNVDILKYQIKSKPGAESCPFQLVAHWKCEPTHTDLKVDYKYNNHAMGSPSPLLNVVLAVPVDGEVTNVQAKPNVQWLPETNRAIWKFTDLSQHSENHGIGCVKARFELKNGPGTPSTIATQFNCEGTTLSGAEFELIGPGYRVSLVKRKFMSGKLVLI
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEcccccccccccccHHHHHHcccccccccccccccccccccccccccccccccccccHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEECccccccEEEEEEEEEEEccccccccccccccccccEEEEEccccccccccccccccccccccccccccccccEEEHHHHHHHHHHHHccccccccccEEEEEEEEEccccccccccEEEEEEEcccccCEEEEEEEEcccccccccccEEEEEEEccccccCEEECcccccccccccccEEccccccccccccccEEEEEEEEccccccccccEEEEEEEcccccccccEEEEcccCEEEEEEEEEcccEEEEc
*************************************EEGYRIR**************************************************************************************************************************************************************************************************************************************IGMSDTIPLAVAFHEIIHSYFRGTDETRCQVKMSGDMMLSFPAGIVSILTS*PSPAQLKFKVSNISHIENMLPNKQLI***************CEFNMSALSSLL*********ASYFNVDILKYQIKSKPGAESCPFQLVAHWKCEPTHTDLKVDYKYNNHAMGSPSPLLNVVLAVPVDGEVTNVQAKPNVQWLPETNRAIWKFTDLSQHSENHGIGCVKARFELKNGPGTPSTIATQFNCEGTTLSGAEFELIGPGYRVSLVKRKFMSGKLVLI
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MTPLVKYLKNHSRYLPQMSDEKENSEPKSEAPTPEVDEEGYRIRPKEEMWDAEKFYSSSDSDSDDDRDHKIHVEIKPLSANTNQISASVDELRVTAGNLTLSPLSVKERRNSIDINPEVNFSQSPHKKINGLAELNHALMKTMGDSASTEDKPDHVDPTEPPLGLLSGNTPPPSSSTSTEKTTSDSSSTSKYTNLGDLFSEVGEIVPALPPKQTARMTPTLTSSTISLPRPPSRRSEGRGHISPLNSTLTRSESEFKTSGVSTTNSSRGPSPLTIGMSDTIPLAVAFHEIIHSYFRGTDETRCQVKMSGDMMLSFPAGIVSILTSNPSPAQLKFKVSNISHIENMLPNKQLINIEENKLDKSSDSMTCEFNMSALSSLLRKQCEQNPSASYFNVDILKYQIKSKPGAESCPFQLVAHWKCEPTHTDLKVDYKYNNHAMGSPSPLLNVVLAVPVDGEVTNVQAKPNVQWLPETNRAIWKFTDLSQHSENHGIGCVKARFELKNGPGTPSTIATQFNCEGTTLSGAEFELIGPGYRVSLVKRKFMSGKLVLI

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
FCH domain only protein 2 May function in an early step of clathrin-mediated endocytosis.confidentQ502I9

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0005488 [MF]bindingprobableGO:0003674
GO:0005905 [CC]coated pitprobableGO:0016020, GO:0044464, GO:0005623, GO:0005575, GO:0012505, GO:0044425
GO:0030136 [CC]clathrin-coated vesicleprobableGO:0043227, GO:0005737, GO:0043231, GO:0016023, GO:0031410, GO:0044464, GO:0044444, GO:0005623, GO:0031988, GO:0005575, GO:0043229, GO:0044424, GO:0005622, GO:0030135, GO:0043226, GO:0031982
GO:0005886 [CC]plasma membraneprobableGO:0005575, GO:0044464, GO:0016020, GO:0071944, GO:0005623

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3G9H, chain A
Confidence level:very confident
Coverage over the Query: 280-377,392-549
View the alignment between query and template
View the model in PyMOL
Template: 1I31, chain A
Confidence level:confident
Coverage over the Query: 280-340,358-549
View the alignment between query and template
View the model in PyMOL