Psyllid ID: psy11190
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 248 | 2.2.26 [Sep-21-2011] | |||||||
| P21158 | 166 | C-factor OS=Myxococcus xa | no | N/A | 0.612 | 0.915 | 0.392 | 2e-27 | |
| Q7Z9I4 | 253 | Uncharacterized oxidoredu | yes | N/A | 0.899 | 0.881 | 0.286 | 3e-21 | |
| Q9P7I6 | 254 | Uncharacterized oxidoredu | no | N/A | 0.754 | 0.736 | 0.338 | 6e-21 | |
| Q7Z9I2 | 253 | Uncharacterized oxidoredu | no | N/A | 0.919 | 0.901 | 0.276 | 9e-21 | |
| Q7Z9I3 | 253 | Uncharacterized oxidoredu | no | N/A | 0.903 | 0.885 | 0.272 | 1e-18 | |
| P36086 | 256 | Uncharacterized oxidoredu | yes | N/A | 0.899 | 0.871 | 0.281 | 3e-15 | |
| O54753 | 317 | 17-beta-hydroxysteroid de | yes | N/A | 0.866 | 0.678 | 0.283 | 7e-14 | |
| Q9R092 | 317 | 17-beta-hydroxysteroid de | yes | N/A | 0.766 | 0.599 | 0.299 | 2e-13 | |
| O14756 | 317 | 17-beta-hydroxysteroid de | yes | N/A | 0.774 | 0.605 | 0.288 | 2e-11 | |
| Q3T001 | 317 | 17-beta-hydroxysteroid de | no | N/A | 0.733 | 0.574 | 0.296 | 3e-11 |
| >sp|P21158|CSGA_MYXXA C-factor OS=Myxococcus xanthus GN=csgA PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 122 bits (306), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/163 (39%), Positives = 95/163 (58%), Gaps = 11/163 (6%)
Query: 85 LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLG 144
++VL+NNAG++ + LG + M F +N PL +T MLP L++ G
Sbjct: 13 VDVLINNAGVSGLWCALGDVDYADMARTFTINALGPLRVTSAMLPGLRQ----------G 62
Query: 145 SSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWV 204
+ R + +V+S MGS+ NT GG + YR SKAALN A RS+S DL+ + + +HPGWV
Sbjct: 63 ALRR-VAHVTSRMGSLAANTDGGAYAYRMSKAALNMAVRSMSTDLRPEGFVTVLLHPGWV 121
Query: 205 KTDMGGSNAPLEVGAATAGIIQFIQSLGEAHNGGFFEYTGKAI 247
+TDMGG +A L + G+++ I L H+G FF+Y G +
Sbjct: 122 QTDMGGPDATLPAPDSVRGMLRVIDGLNPEHSGRFFDYQGTEV 164
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Cell-cell signaling protein required for fruiting body morphogenesis. Necessary for cellular aggregation, for spore differentiation, and for gene expression that is initiated after 6 hour of starvation. Myxococcus xanthus (taxid: 34) |
| >sp|Q7Z9I4|YCP6_SCHPO Uncharacterized oxidoreductase C663.06c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC663.06c PE=3 SV=1 | Back alignment and function description |
|---|
Score = 102 bits (253), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 124/269 (46%), Gaps = 46/269 (17%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K I G NRG+GL ++K L N + +FA+ R + A EL ++ HSN+H+I+LD
Sbjct: 6 KIYFIAGGNRGIGLSLVK---ELSNREGTVVFASARKPEAATELQEWSKSHSNVHIIKLD 62
Query: 62 VTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAP 120
++ + +V K G ++VL N+GI F + + H+ NV P
Sbjct: 63 ISSLESANEAA----QEVAKAVGKVDVLWVNSGIFHSFNTVLNTPDDVWNSHYKTNVLGP 118
Query: 121 LMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHP-----YRCSK 175
+ + + PL+KK G S+ IV SS++GS+ G F P Y SK
Sbjct: 119 IHVYQAFYPLVKK----------GESK-IIVFTSSLVGSM-----GAFFPFNQSGYGQSK 162
Query: 176 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGG-----------------SNAPLEVG 218
AALN + +S +L+ + I ++HPG V+TD + L
Sbjct: 163 AALNFTMKEISFELQDEGFIVISIHPGMVRTDSAQEAVNQHAEAKPEILDIFAKQALAPD 222
Query: 219 AATAGIIQFIQSLGEAHNGGFFEYTGKAI 247
+ + +++ + +L +NG FF Y G I
Sbjct: 223 QSASDMLKVVDNLKPENNGFFFNYDGTTI 251
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Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) EC: 1 EC: . EC: - EC: . EC: - EC: . EC: - |
| >sp|Q9P7I6|YJNK_SCHPO Uncharacterized oxidoreductase C24B10.20 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC24B10.20 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 101 bits (251), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 103/204 (50%), Gaps = 17/204 (8%)
Query: 5 LITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTD 64
+I G NRG+GL ++K L N + +FA+ R A EL ++ HSN+H+I+LDVT
Sbjct: 10 VIVGGNRGIGLSLVK---ELSNKEGVTVFASARGPGSASELKDWSKTHSNVHIIKLDVTS 66
Query: 65 FSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLT 124
+D + + VVK ++VL N+GI+ F + E H+ NV P+ +
Sbjct: 67 LRSAKDAAMQ-VEKVVK--CIDVLWVNSGISKSFQPVLKTSDELWMSHYQTNVLGPIHVY 123
Query: 125 KTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNAATRS 184
+ LLK+ N SS AA MG + NT + Y SKAALN +
Sbjct: 124 QAFYHLLKEGKLKNIV--FTSSMAA------CMGGVRPNT---YSAYGQSKAALNYTMKE 172
Query: 185 LSIDLKGDKIIATAMHPGWVKTDM 208
+S +L+ D + ++HPG V TDM
Sbjct: 173 ISFELEKDGFVVVSIHPGVVNTDM 196
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Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) EC: 1 EC: . EC: - EC: . EC: - EC: . EC: - |
| >sp|Q7Z9I2|YCP9_SCHPO Uncharacterized oxidoreductase C663.09c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC663.09c PE=3 SV=1 | Back alignment and function description |
|---|
Score = 100 bits (249), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 122/264 (46%), Gaps = 36/264 (13%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K I G NRG+GL ++K L + + +FA+ R + A EL ++ H N+ +ELD
Sbjct: 6 KVYFIAGGNRGIGLSLVK---ELSSREGTTVFASARKPEAATELQEWSKSHPNVKTVELD 62
Query: 62 VTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTD-HFLVNVTAP 120
VT + + ++ V G++VL N+GI + + + PE++ + H+ NV P
Sbjct: 63 VTSQQSANEAA-QSVAKAV--DGIDVLWLNSGICQSYYTV-MEAPEEVWNAHYQTNVLGP 118
Query: 121 LMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNA 180
+ + K PLL K ++ SS GS+ D GF Y SKAA+N
Sbjct: 119 IHVFKAFYPLLTKKKTRQ-----------VIFTSSECGSMGDFRATGFSAYGQSKAAINF 167
Query: 181 ATRSLSIDLKGDKIIATAMHPGWVKTDMGG-------SNAP----------LEVGAATAG 223
+ LS++L + ++HPG VKTDM +P + + +
Sbjct: 168 TMKELSVELADEHFTFISIHPGVVKTDMNADAIKKFTETSPEMLTYLKKVTIIPEESVSS 227
Query: 224 IIQFIQSLGEAHNGGFFEYTGKAI 247
+++ + +L +NG F+ Y G I
Sbjct: 228 MLKVVDNLKPENNGSFYRYDGTII 251
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Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) EC: 1 EC: . EC: - EC: . EC: - EC: . EC: - |
| >sp|Q7Z9I3|YCP8_SCHPO Uncharacterized oxidoreductase C663.08c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC663.08c PE=3 SV=1 | Back alignment and function description |
|---|
Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 123/268 (45%), Gaps = 44/268 (16%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K I G NRG+GL ++K L N + +FA+ R A +L ++ HSN+H+I+LD
Sbjct: 6 KIYFIAGGNRGIGLSLVK---ELSNRKGTVVFASARKPGAATKLQEWSKSHSNVHIIKLD 62
Query: 62 VTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPL 121
V+ + ++++ VV ++VL N+ + F + + H+ NV P+
Sbjct: 63 VSSLESANEAA-QEVTKVV--DAVDVLWVNSAVFHSFGPVVNTPDDVWNSHYKTNVLGPI 119
Query: 122 MLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHP-----YRCSKA 176
+ + PL+KK G S+ IV SS+ GS+ G F P Y SKA
Sbjct: 120 HVYQAFYPLIKK----------GRSKI-IVFTSSLAGSM-----GAFFPSSQSAYGQSKA 163
Query: 177 ALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGG-----------------SNAPLEVGA 219
ALN + +S +L+ + I ++HPG V+TD + L
Sbjct: 164 ALNYTMKEISFELQDEGFIVISIHPGAVRTDSAQEIVNQHAEKKPEILDLFAKQALTPEK 223
Query: 220 ATAGIIQFIQSLGEAHNGGFFEYTGKAI 247
+ + +++ + +L +NG F+ Y G I
Sbjct: 224 SASDMLKVVDNLKPENNGLFYNYDGTII 251
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Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) EC: 1 EC: . EC: - EC: . EC: - EC: . EC: - |
| >sp|P36086|YKH1_YEAST Uncharacterized oxidoreductase YKL071W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YKL071W PE=1 SV=1 | Back alignment and function description |
|---|
Score = 82.4 bits (202), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 117/263 (44%), Gaps = 40/263 (15%)
Query: 3 SILITGCNRGLGLGMIKVL-VGLGNNQPAHIFAT-CRNKDKAVELLALAQQHSNLHVIEL 60
+ I G +RG+G ++K+L GN I + K+K VE LA+ N+H+++L
Sbjct: 8 TYFIIGGSRGIGFNLVKILSASTGNTVITSIRGSPSLPKNKQVE--DLAKIRKNIHIVQL 65
Query: 61 DVTDFSKQQDVLFKDISDVVKDQ----GLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVN 116
D+T +D +I+D +K G+++ + + ++ + ++ +H+ N
Sbjct: 66 DLT-----KDESIGNIADEIKKTPFFLGIDIFIACSAVSDSYYKVLETPKSVWLNHYSTN 120
Query: 117 VTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKA 176
P++ + + PLL L I +SS+ GSI Y SKA
Sbjct: 121 ALGPILALQKVYPLL-----------LLKKTRKIFFISSVAGSINAFVPLSVSAYGQSKA 169
Query: 177 ALNAATRSLSIDLKGDKIIATAMHPGWVKTDMG---------------GSNAPLEVGAAT 221
ALN A ++LS +LK + A HPG V TDMG G N +A+
Sbjct: 170 ALNYAVKTLSFELKPEGFTVVAFHPGMVSTDMGQYGLDHFKEKNIDISGVNIITPEESAS 229
Query: 222 AGIIQFIQSLGEAHNGGFFEYTG 244
A I F + L E NG FF Y G
Sbjct: 230 ALIDVFRKILPE-DNGKFFNYDG 251
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Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) |
| >sp|O54753|H17B6_RAT 17-beta-hydroxysteroid dehydrogenase type 6 OS=Rattus norvegicus GN=Hsd17b6 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 77.8 bits (190), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 110/240 (45%), Gaps = 25/240 (10%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K + ITGC+ G G + + L + + + A C + A EL + + L + LD
Sbjct: 30 KYVFITGCDSGFGNLLARQL----DRRGMRVLAACLTEKGAEELKS--KTSDRLETVILD 83
Query: 62 VTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPL 121
VT+ + + + + V D+GL LVNNAG+ F + +PE F VN+
Sbjct: 84 VTN-TDSISAATQWVKEHVGDKGLWGLVNNAGVFQAFAYIEWCRPEDCMSIFQVNLIGLA 142
Query: 122 MLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNAA 181
+T +ML L+KKA R IVNVSS++G + GGF Y CSK + A
Sbjct: 143 QVTLSMLFLVKKA------------RGRIVNVSSVLGRVA--LFGGF--YSCSKYGVEAF 186
Query: 182 TRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQSLGEAHNGGFFE 241
+ L +++ + + + PG KT M + +E T + + E++ FF+
Sbjct: 187 SDVLRREIRDFGVKVSIIEPGSFKTRMTDAELIIEKTKKTWEATP--EHIRESYGQQFFD 244
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NAD-dependent oxidoreductase with broad substrate specificity that shows both oxidative and reductive activity (in vitro). Has retinol dehydrogenase activity towards all-trans-retinol (in vitro) (By similarity). Has 17-beta-hydroxysteroid dehydrogenase activity towards various steroids (in vitro). Converts 5-alpha-androstan-3-alpha,17-beta-diol to androsterone and estradiol to estrone (in vitro). Has 3-alpha-hydroxysteroid dehydrogenase activity towards androsterone (in vitro). Rattus norvegicus (taxid: 10116) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 6 EC: 3 |
| >sp|Q9R092|H17B6_MOUSE 17-beta-hydroxysteroid dehydrogenase type 6 OS=Mus musculus GN=Hsd17b6 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 76.3 bits (186), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 102/217 (47%), Gaps = 27/217 (12%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K + ITGC+ G G + + L + + + A C + A EL + L + LD
Sbjct: 30 KYVFITGCDSGFGNLLARQL----DRRGMRVLAACLTEKGAEELRN--KTSDRLETVILD 83
Query: 62 VTDFSKQQDVL--FKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTA 119
VT K + ++ + + + V D+GL LVNNAG+ F + +PE F VN+
Sbjct: 84 VT---KTESIVAATQWVKERVGDRGLWGLVNNAGVLQPFAYIEWYRPEDYMPIFQVNLIG 140
Query: 120 PLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALN 179
+T +ML L+KKA R IVNVSS +G + GGF Y CSK +
Sbjct: 141 LTQVTISMLFLVKKA------------RGRIVNVSSALGRV--ALFGGF--YSCSKYGVE 184
Query: 180 AATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLE 216
A + L +++ + + + PG KT+M + +E
Sbjct: 185 AFSDVLRHEVQDFGVKVSIIEPGSFKTEMTDAELTIE 221
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NAD-dependent oxidoreductase with broad substrate specificity that shows both oxidative and reductive activity (in vitro). Has 17-beta-hydroxysteroid dehydrogenase activity towards various steroids (in vitro). Converts 5-alpha-androstan-3-alpha,17-beta-diol to androsterone and estradiol to estrone (in vitro). Has 3-alpha-hydroxysteroid dehydrogenase activity towards androsterone (in vitro). Has retinol dehydrogenase activity towards all-trans-retinol (in vitro). Mus musculus (taxid: 10090) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 6 EC: 3 |
| >sp|O14756|H17B6_HUMAN 17-beta-hydroxysteroid dehydrogenase type 6 OS=Homo sapiens GN=HSD17B6 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 94/215 (43%), Gaps = 23/215 (10%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K + ITGC+ G G + + L G + A C + A +L Q L + LD
Sbjct: 30 KYVFITGCDSGFGNLLARQLDARG----LRVLAACLTEKGAEQLRG--QTSDRLETVTLD 83
Query: 62 VTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPL 121
VT + + + V D+GL LVNNAGI T L E + VN+ +
Sbjct: 84 VTKMESIAAAT-QWVKEHVGDRGLWGLVNNAGILTPITLCEWLNTEDSMNMLKVNLIGVI 142
Query: 122 MLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNAA 181
+T +MLPL+++A R IVNVSSI+G + G Y SK + A
Sbjct: 143 QVTLSMLPLVRRA------------RGRIVNVSSILGRVAFFVGG----YCVSKYGVEAF 186
Query: 182 TRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLE 216
+ L +++ + + + PG+ +T M LE
Sbjct: 187 SDILRREIQHFGVKISIVEPGYFRTGMTNMTQSLE 221
|
NAD-dependent oxidoreductase with broad substrate specificity that shows both oxidative and reductive activity (in vitro). Has 17-beta-hydroxysteroid dehydrogenase activity towards various steroids (in vitro). Converts 5-alpha-androstan-3-alpha,17-beta-diol to androsterone and estradiol to estrone (in vitro). Has 3-alpha-hydroxysteroid dehydrogenase activity towards androsterone (in vitro). Has retinol dehydrogenase activity towards all-trans-retinol (in vitro). Can convert androsterone to epi-androsterone. Androsterone is first oxidized to 5-alpha-androstane-3,17-dione and then reduced to epi-andosterone. Can act on both C-19 and C-21 3-alpha-hydroxysteroids. Homo sapiens (taxid: 9606) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 6 EC: 3 |
| >sp|Q3T001|H17B6_BOVIN 17-beta-hydroxysteroid dehydrogenase type 6 OS=Bos taurus GN=HSD17B6 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 68.9 bits (167), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 96/209 (45%), Gaps = 27/209 (12%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K + ITGC+ G G + + L + + + A C + A +L Q L + LD
Sbjct: 30 KFVFITGCDSGFGNQLARQL----DLRGLRVLAGCLTEQGAEQLRN--QTSDRLQTVILD 83
Query: 62 VTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPL 121
VT ++ + + + V D+GL LVNNAGI +K E D VN+ +
Sbjct: 84 VTK-TESIAAATEWVKECVGDRGLWGLVNNAGIFHSHGYAEWIKIETYRDTLRVNLIGVI 142
Query: 122 MLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFH--PYRCSKAALN 179
+T +MLPL++KA + IVNVSSI+G I F Y CSK +
Sbjct: 143 EVTLSMLPLVRKA------------QGRIVNVSSILGRI------AFFGAVYSCSKYGVE 184
Query: 180 AATRSLSIDLKGDKIIATAMHPGWVKTDM 208
A + L +L+ + + + PG+ +T M
Sbjct: 185 AFSDILRRELQHFGVKVSMVEPGYFRTAM 213
|
NAD-dependent oxidoreductase with broad substrate specificity that shows both oxidative and reductive activity (in vitro). Has 17-beta-hydroxysteroid dehydrogenase activity towards various steroids (in vitro). Converts 5-alpha-androstan-3-alpha,17-beta-diol to androsterone and estradiol to estrone (in vitro). Has 3-alpha-hydroxysteroid dehydrogenase activity towards androsterone (in vitro). Has retinol dehydrogenase activity towards all-trans-retinol (in vitro). Can convert androsterone to epi-androsterone. Androsterone is first oxidized to 5-alpha-androstane-3,17-dione and then reduced to epi-andosterone. Can act on both C-19 and C-21 3-alpha-hydroxysteroids. Bos taurus (taxid: 9913) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 6 EC: 3 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 248 | ||||||
| 189235593 | 370 | PREDICTED: similar to short-chain dehydr | 0.991 | 0.664 | 0.536 | 7e-76 | |
| 170039978 | 247 | short-chain dehydrogenase [Culex quinque | 0.987 | 0.991 | 0.550 | 1e-75 | |
| 195565725 | 247 | GD16123 [Drosophila simulans] gi|1942038 | 0.987 | 0.991 | 0.546 | 2e-73 | |
| 157132840 | 247 | short-chain dehydrogenase [Aedes aegypti | 0.987 | 0.991 | 0.534 | 3e-73 | |
| 24640547 | 247 | sniffer [Drosophila melanogaster] gi|729 | 0.987 | 0.991 | 0.546 | 3e-73 | |
| 195480172 | 247 | GE17468 [Drosophila yakuba] gi|194188690 | 0.987 | 0.991 | 0.542 | 6e-73 | |
| 195396541 | 247 | GJ16775 [Drosophila virilis] gi|19414665 | 0.987 | 0.991 | 0.542 | 6e-73 | |
| 195448977 | 247 | GK10240 [Drosophila willistoni] gi|19416 | 0.987 | 0.991 | 0.530 | 7e-73 | |
| 195131913 | 247 | GI14710 [Drosophila mojavensis] gi|19390 | 0.975 | 0.979 | 0.545 | 8e-73 | |
| 194768094 | 247 | GF19520 [Drosophila ananassae] gi|190623 | 0.987 | 0.991 | 0.542 | 8e-73 |
| >gi|189235593|ref|XP_968272.2| PREDICTED: similar to short-chain dehydrogenase [Tribolium castaneum] | Back alignment and taxonomy information |
|---|
Score = 289 bits (740), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 133/248 (53%), Positives = 190/248 (76%), Gaps = 2/248 (0%)
Query: 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIEL 60
MKSIL+TGCNRG+GLG+I+ LV N P H+ ATCR+ +KA +L +A ++ N+H++EL
Sbjct: 124 MKSILVTGCNRGIGLGLIRHLV-REKNPPKHVIATCRSIEKAKDLQHIAAENKNVHLLEL 182
Query: 61 DVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAP 120
DV ++ + D K + +V+ GLN+L NNAG+++KFTR+ L+K +QM + F VN P
Sbjct: 183 DVRNYD-EYDNFSKKVEQIVQSDGLNILFNNAGVSSKFTRVQLVKYDQMLEAFKVNTIGP 241
Query: 121 LMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNA 180
+MLTK +LPLLK+A++ NS PLG+++A IVN +S++GSI N+ GGF PYRCSKAALN
Sbjct: 242 VMLTKALLPLLKQAAQNNSDKPLGANKALIVNTTSVLGSIALNSDGGFFPYRCSKAALNM 301
Query: 181 ATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQSLGEAHNGGFF 240
AT+SLS+DL+ D I+ T +HPGWVKTDMGGSNAPL+V + GI++ I+++ E+HNGGF+
Sbjct: 302 ATKSLSVDLQKDGILVTGIHPGWVKTDMGGSNAPLDVDTSVVGILELIRNVNESHNGGFY 361
Query: 241 EYTGKAIK 248
+Y GK ++
Sbjct: 362 QYDGKQLE 369
|
Source: Tribolium castaneum Species: Tribolium castaneum Genus: Tribolium Family: Tenebrionidae Order: Coleoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|170039978|ref|XP_001847792.1| short-chain dehydrogenase [Culex quinquefasciatus] gi|167863572|gb|EDS26955.1| short-chain dehydrogenase [Culex quinquefasciatus] | Back alignment and taxonomy information |
|---|
Score = 288 bits (738), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 136/247 (55%), Positives = 185/247 (74%), Gaps = 2/247 (0%)
Query: 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIEL 60
M SILITGCNRGLGLG+IK + L P H+ ATCRN +A EL +LA+QHSNLHV+++
Sbjct: 1 MNSILITGCNRGLGLGLIKCFLKLPT-PPRHVIATCRNMQQAEELKSLAEQHSNLHVLQI 59
Query: 61 DVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAP 120
D+ + ++ K++ +V+D GLNVL NNAG++ K TRL K E + D F+ NV AP
Sbjct: 60 DLKAIDQFEN-FAKEVETIVQDNGLNVLFNNAGVSPKSTRLNFTKSEDLNDTFMTNVVAP 118
Query: 121 LMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNA 180
+MLTK ++PLLK+A+EAN++AP+G ++A IVN+SSI+GSIE N+ GG + YR SK+ALN+
Sbjct: 119 IMLTKALVPLLKQAAEANASAPIGPTKACIVNMSSILGSIEANSDGGLYAYRTSKSALNS 178
Query: 181 ATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQSLGEAHNGGFF 240
AT+S+SIDLKG+ I+A A+HPGWV+TDMGGS APL V + A ++Q + LGE NG F
Sbjct: 179 ATKSMSIDLKGNGIMAVALHPGWVRTDMGGSKAPLSVEQSCAKMVQTVMGLGEKQNGAFL 238
Query: 241 EYTGKAI 247
+Y GK +
Sbjct: 239 QYDGKGL 245
|
Source: Culex quinquefasciatus Species: Culex quinquefasciatus Genus: Culex Family: Culicidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|195565725|ref|XP_002106449.1| GD16123 [Drosophila simulans] gi|194203825|gb|EDX17401.1| GD16123 [Drosophila simulans] | Back alignment and taxonomy information |
|---|
Score = 281 bits (719), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 135/247 (54%), Positives = 178/247 (72%), Gaps = 2/247 (0%)
Query: 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIEL 60
M SILITGCNRGLGLG++K L+ L P H+F TCRN+++A EL LA++HSN+H++E+
Sbjct: 1 MNSILITGCNRGLGLGLVKALLNLPQ-PPQHLFTTCRNREQAKELEDLAKKHSNIHILEI 59
Query: 61 DVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAP 120
D+ +F D L DI V KDQGLNVL NNAGIA K R+ ++ +++ D N P
Sbjct: 60 DLRNFDAY-DKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVP 118
Query: 121 LMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNA 180
+ML K LPLLKKA++AN + P+G RAAI+N+SSI+GSI+ NT GG + YR SK+ALNA
Sbjct: 119 IMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNA 178
Query: 181 ATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQSLGEAHNGGFF 240
AT+SLS+DL +I+ ++HPGWVKTDMGGS+APL+V +T I+Q I LGE NGGF
Sbjct: 179 ATKSLSVDLYPQRIMCVSLHPGWVKTDMGGSSAPLDVPTSTGQIVQTISKLGEKQNGGFV 238
Query: 241 EYTGKAI 247
Y G +
Sbjct: 239 NYDGTPL 245
|
Source: Drosophila simulans Species: Drosophila simulans Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|157132840|ref|XP_001662664.1| short-chain dehydrogenase [Aedes aegypti] gi|108881627|gb|EAT45852.1| AAEL002901-PA [Aedes aegypti] | Back alignment and taxonomy information |
|---|
Score = 280 bits (717), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 132/247 (53%), Positives = 181/247 (73%), Gaps = 2/247 (0%)
Query: 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIEL 60
M SILITGCNRGLGLG+IK + L + P HI ATCRN +A EL +L +QH NLHV+++
Sbjct: 1 MNSILITGCNRGLGLGLIKSFLNL-STPPRHIIATCRNIQQAEELNSLGKQHGNLHVLQI 59
Query: 61 DVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAP 120
D+ D K D +++ +V+D GLNVL NNAG++ K TRL +K + + + F+ N AP
Sbjct: 60 DLKDVDKY-DQFVQEVEAIVQDNGLNVLFNNAGVSPKSTRLNFVKSDDLIETFVTNTVAP 118
Query: 121 LMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNA 180
+MLTK +PLLKKA+E N++AP+G +A +VN+SSI+GSI N+ GG + YR SKAALNA
Sbjct: 119 IMLTKAFVPLLKKAAEVNASAPMGPQKACVVNMSSILGSIGANSDGGLYAYRTSKAALNA 178
Query: 181 ATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQSLGEAHNGGFF 240
AT+S+S+DLK ++I+A A+HPGWV+TDMGGS APL + + ++Q + LGE HNGGF
Sbjct: 179 ATKSMSLDLKPNQIMAVALHPGWVRTDMGGSKAPLSIEQSCNRMVQTVMQLGEKHNGGFL 238
Query: 241 EYTGKAI 247
+Y GK +
Sbjct: 239 QYDGKEL 245
|
Source: Aedes aegypti Species: Aedes aegypti Genus: Aedes Family: Culicidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|24640547|ref|NP_572466.1| sniffer [Drosophila melanogaster] gi|7290912|gb|AAF46353.1| sniffer [Drosophila melanogaster] gi|21428532|gb|AAM49926.1| LD36273p [Drosophila melanogaster] gi|220944666|gb|ACL84876.1| sni-PA [synthetic construct] gi|220954468|gb|ACL89777.1| sni-PA [synthetic construct] | Back alignment and taxonomy information |
|---|
Score = 280 bits (717), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 135/247 (54%), Positives = 177/247 (71%), Gaps = 2/247 (0%)
Query: 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIEL 60
M SILITGCNRGLGLG++K L+ L P H+F TCRN+++A EL LA+ HSN+H++E+
Sbjct: 1 MNSILITGCNRGLGLGLVKALLNLPQ-PPQHLFTTCRNREQAKELEDLAKNHSNIHILEI 59
Query: 61 DVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAP 120
D+ +F D L DI V KDQGLNVL NNAGIA K R+ ++ +++ D N P
Sbjct: 60 DLRNFDAY-DKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVP 118
Query: 121 LMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNA 180
+ML K LPLLKKA++AN + P+G RAAI+N+SSI+GSI+ NT GG + YR SK+ALNA
Sbjct: 119 IMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNA 178
Query: 181 ATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQSLGEAHNGGFF 240
AT+SLS+DL +I+ ++HPGWVKTDMGGS+APL+V +T I+Q I LGE NGGF
Sbjct: 179 ATKSLSVDLYPQRIMCVSLHPGWVKTDMGGSSAPLDVPTSTGQIVQTISKLGEKQNGGFV 238
Query: 241 EYTGKAI 247
Y G +
Sbjct: 239 NYDGTPL 245
|
Source: Drosophila melanogaster Species: Drosophila melanogaster Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|195480172|ref|XP_002101166.1| GE17468 [Drosophila yakuba] gi|194188690|gb|EDX02274.1| GE17468 [Drosophila yakuba] | Back alignment and taxonomy information |
|---|
Score = 280 bits (715), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 134/247 (54%), Positives = 177/247 (71%), Gaps = 2/247 (0%)
Query: 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIEL 60
M SILITGCNRGLGLG++K L+ L P H+F TCRN+++A EL LA++HSN+H++E+
Sbjct: 1 MNSILITGCNRGLGLGLVKALLNLPQ-PPQHLFTTCRNREQAKELEDLAKKHSNIHILEI 59
Query: 61 DVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAP 120
D+ +F D L DI V KDQGLNVL NNAGIA K R+ ++ +++ D N P
Sbjct: 60 DLRNFDAY-DKLIADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVP 118
Query: 121 LMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNA 180
+ML K LPLLKKA++AN + P+G RAAI+N+SSI+GSI+ NT GG + YR SK+ALNA
Sbjct: 119 IMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNA 178
Query: 181 ATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQSLGEAHNGGFF 240
AT+SLS+DL +I+ ++HPGWVKTDMGGS+APL+V +T I+Q I L E NGGF
Sbjct: 179 ATKSLSVDLYPQRIMCVSLHPGWVKTDMGGSSAPLDVPTSTGQIVQTISKLSEKQNGGFI 238
Query: 241 EYTGKAI 247
Y G +
Sbjct: 239 NYDGTPL 245
|
Source: Drosophila yakuba Species: Drosophila yakuba Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|195396541|ref|XP_002056890.1| GJ16775 [Drosophila virilis] gi|194146657|gb|EDW62376.1| GJ16775 [Drosophila virilis] | Back alignment and taxonomy information |
|---|
Score = 279 bits (714), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 134/247 (54%), Positives = 176/247 (71%), Gaps = 2/247 (0%)
Query: 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIEL 60
M SILITGCNRGLGLG++K L L P H+F TCRN ++A EL LA++HSN+H++E+
Sbjct: 1 MNSILITGCNRGLGLGLVKALNALPE-PPQHLFTTCRNLEQATELKKLAKEHSNIHILEI 59
Query: 61 DVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAP 120
D+ +F ++ D L IS+V KD GLNVL NNAGIA K R G + + + D N P
Sbjct: 60 DLRNF-EEYDKLVGKISEVTKDAGLNVLFNNAGIAPKSVRFGATRQQDLIDTLQTNTVVP 118
Query: 121 LMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNA 180
+ML K LPLLK+ASE N L RAAI+N+SSI+GSI+ NT GG PYR SK+ALNA
Sbjct: 119 VMLAKACLPLLKRASEVNENVSLSVKRAAIINMSSILGSIQANTDGGLLPYRTSKSALNA 178
Query: 181 ATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQSLGEAHNGGFF 240
AT+S+SIDL KI+ ++HPGWV+TDMGG+NAPL+V +T I++ I L E+HNGGF+
Sbjct: 179 ATKSMSIDLAPQKILCVSLHPGWVRTDMGGNNAPLDVATSTEQIVKTICQLDESHNGGFY 238
Query: 241 EYTGKAI 247
+Y G+ +
Sbjct: 239 QYNGEQL 245
|
Source: Drosophila virilis Species: Drosophila virilis Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|195448977|ref|XP_002071895.1| GK10240 [Drosophila willistoni] gi|194167980|gb|EDW82881.1| GK10240 [Drosophila willistoni] | Back alignment and taxonomy information |
|---|
Score = 279 bits (714), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 131/247 (53%), Positives = 178/247 (72%), Gaps = 2/247 (0%)
Query: 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIEL 60
M SILITGCNRGLGLG++K L L P H+F TCRN+++A EL LA+++SN+H++E+
Sbjct: 1 MNSILITGCNRGLGLGLVKALNALPQ-PPQHLFTTCRNREQATELQDLAKKYSNIHILEI 59
Query: 61 DVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAP 120
D+ +F D L DI + KD+GLNVL NNAG++ K R+G K + + D N P
Sbjct: 60 DLRNFDAY-DKLIADIEAITKDKGLNVLFNNAGVSPKSVRIGATKHQDLLDTLQTNTVVP 118
Query: 121 LMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNA 180
+M+ K LPLLKKAS AN P+G RAAI+N+SSI+GSI+ N QG + YR SKAALNA
Sbjct: 119 IMMAKACLPLLKKASTANEDQPMGVGRAAIINMSSILGSIQSNVQGAMYGYRTSKAALNA 178
Query: 181 ATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQSLGEAHNGGFF 240
AT+SLSIDL+ KI+ ++HPGWV+TDMGGS+APL+V +T ++Q + +GE HNGGF+
Sbjct: 179 ATKSLSIDLQAQKIMCISLHPGWVRTDMGGSSAPLDVTTSTEQMVQTLIQMGEKHNGGFY 238
Query: 241 EYTGKAI 247
+Y G+ +
Sbjct: 239 QYDGEQL 245
|
Source: Drosophila willistoni Species: Drosophila willistoni Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|195131913|ref|XP_002010388.1| GI14710 [Drosophila mojavensis] gi|193908838|gb|EDW07705.1| GI14710 [Drosophila mojavensis] | Back alignment and taxonomy information |
|---|
Score = 279 bits (713), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 133/244 (54%), Positives = 175/244 (71%), Gaps = 2/244 (0%)
Query: 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIEL 60
M SILITGCNRGLGLG++K L L P H+F TCRN ++A +L LA++HSN+H++E+
Sbjct: 1 MNSILITGCNRGLGLGLVKALNKLPE-PPQHLFTTCRNLEQATDLKNLAKEHSNIHILEI 59
Query: 61 DVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAP 120
D+ +F + D + I++V KD GLNVL NNAG+A K RLG + + + D N P
Sbjct: 60 DLKNFD-EYDKIVNQIAEVTKDSGLNVLFNNAGVAPKSVRLGATRQQDLIDTLHTNTVVP 118
Query: 121 LMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNA 180
+MLTK LPLLKKAS+AN A + RAAI+N+SSI+GSI+ NT GG PYR SKAALNA
Sbjct: 119 VMLTKACLPLLKKASDANEAESMSVKRAAIINMSSILGSIKSNTDGGLLPYRASKAALNA 178
Query: 181 ATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQSLGEAHNGGFF 240
T+S+SIDL KI+ ++HPGWV+TDMGGSNAPL+V +T I++ I E+HNGGF+
Sbjct: 179 VTKSMSIDLAPQKILCVSLHPGWVRTDMGGSNAPLDVTTSTTKIVETICQFNESHNGGFY 238
Query: 241 EYTG 244
+Y G
Sbjct: 239 QYDG 242
|
Source: Drosophila mojavensis Species: Drosophila mojavensis Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|194768094|ref|XP_001966149.1| GF19520 [Drosophila ananassae] gi|190623034|gb|EDV38558.1| GF19520 [Drosophila ananassae] | Back alignment and taxonomy information |
|---|
Score = 279 bits (713), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 134/247 (54%), Positives = 177/247 (71%), Gaps = 2/247 (0%)
Query: 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIEL 60
M SILITGCNRGLGLG++K LVGL P H+F TCRN+++A EL LA++HSN+H++E+
Sbjct: 1 MNSILITGCNRGLGLGLVKTLVGLPQ-PPQHLFTTCRNREQAQELEELAKKHSNIHILEI 59
Query: 61 DVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAP 120
D+ +F D L DI V KD+GLNVL NNAG+A K TR+ + + + D N P
Sbjct: 60 DLRNFDAY-DKLVSDIDCVTKDKGLNVLFNNAGVAPKSTRITATRSQDLLDTLQTNTVVP 118
Query: 121 LMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNA 180
+ML K LPLLKKA++ N + P+G +RAAIVN++SI+GSI+ NT GG + YR SK+ALNA
Sbjct: 119 IMLAKACLPLLKKAAKVNESQPMGVNRAAIVNMTSILGSIQANTDGGMYAYRTSKSALNA 178
Query: 181 ATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQSLGEAHNGGFF 240
AT+SLSIDL +I+ ++HPGWV+TDMGGSNAPL+V +T I+Q + LGE NG F
Sbjct: 179 ATKSLSIDLFPQRIMCVSLHPGWVRTDMGGSNAPLDVDTSTGRIVQTLCELGEPQNGTFI 238
Query: 241 EYTGKAI 247
Y G +
Sbjct: 239 NYDGSPL 245
|
Source: Drosophila ananassae Species: Drosophila ananassae Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 248 | ||||||
| FB|FBgn0030026 | 247 | sni "sniffer" [Drosophila mela | 0.975 | 0.979 | 0.508 | 7.9e-62 | |
| UNIPROTKB|E1BUD0 | 253 | LOC771069 "Uncharacterized pro | 0.971 | 0.952 | 0.38 | 2e-40 | |
| ZFIN|ZDB-GENE-050419-83 | 256 | si:dkey-12e7.4 "si:dkey-12e7.4 | 0.967 | 0.937 | 0.368 | 7.8e-39 | |
| UNIPROTKB|F1N9C1 | 254 | LOC415661 "Uncharacterized pro | 0.983 | 0.960 | 0.360 | 2.1e-36 | |
| WB|WBGene00008332 | 250 | C55A6.3 [Caenorhabditis elegan | 0.939 | 0.932 | 0.384 | 3.5e-36 | |
| ZFIN|ZDB-GENE-050417-323 | 255 | zgc:110339 "zgc:110339" [Danio | 0.959 | 0.933 | 0.368 | 7.2e-36 | |
| WB|WBGene00008335 | 250 | C55A6.6 [Caenorhabditis elegan | 0.939 | 0.932 | 0.382 | 5.1e-35 | |
| ZFIN|ZDB-GENE-070424-53 | 257 | zgc:163083 "zgc:163083" [Danio | 0.967 | 0.933 | 0.378 | 5.1e-35 | |
| WB|WBGene00008333 | 250 | C55A6.4 [Caenorhabditis elegan | 0.939 | 0.932 | 0.373 | 1.1e-34 | |
| UNIPROTKB|F1NFS8 | 279 | LOC100857820 "Uncharacterized | 0.967 | 0.860 | 0.357 | 1.3e-34 |
| FB|FBgn0030026 sni "sniffer" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 632 (227.5 bits), Expect = 7.9e-62, P = 7.9e-62
Identities = 124/244 (50%), Positives = 164/244 (67%)
Query: 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIEL 60
M SILITGCNRGLGLG++K L+ L P H+F TCRN+++A EL LA+ HSN+H++E+
Sbjct: 1 MNSILITGCNRGLGLGLVKALLNLPQ-PPQHLFTTCRNREQAKELEDLAKNHSNIHILEI 59
Query: 61 DVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVXXX 120
D+ +F D L DI V KDQGLNVL NNAGIA K R+ ++ +++ D N
Sbjct: 60 DLRNFDAY-DKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVP 118
Query: 121 XXXXXXXXXXXXXXSEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNA 180
++AN + P+G RAAI+N+SSI+GSI+ NT GG + YR SK+ALNA
Sbjct: 119 IMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNA 178
Query: 181 ATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQSLGEAHNGGFF 240
AT+SLS+DL +I+ ++HPGWVKTDMGGS+APL+V +T I+Q I LGE NGGF
Sbjct: 179 ATKSLSVDLYPQRIMCVSLHPGWVKTDMGGSSAPLDVPTSTGQIVQTISKLGEKQNGGFV 238
Query: 241 EYTG 244
Y G
Sbjct: 239 NYDG 242
|
|
| UNIPROTKB|E1BUD0 LOC771069 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
Identities = 95/250 (38%), Positives = 147/250 (58%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
+S+LITGC+RG+GLG+++ L + P +FATCR DKA EL L++Q+SN+ +++LD
Sbjct: 7 RSVLITGCSRGIGLGLVRGLAA-SDPPPEVVFATCRYPDKAQELQQLSKQYSNIKLLQLD 65
Query: 62 VTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVXXXX 121
V + + V+ K++ ++V D+GLN L+NNAGI L + E M + N
Sbjct: 66 VVCENSIKKVV-KEVEEIVGDKGLNCLINNAGINV-LASLEDVTAETMLTIYETNTVAQL 123
Query: 122 XXXXXXXXXXXXXSEANSAAPLGSSRAAIVNVSSIMGS---IEDNTQG-GFHPYRCSKAA 177
++ ++ +G RAAI+N+SS+ S ++ N +PYR +K A
Sbjct: 124 MVTKAFLPLLRKAAQLSTG--MGCHRAAIINMSSLAASMQLVQANEMFLKVYPYRIAKTA 181
Query: 178 LNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQSLGEAHNG 237
LN TR L+ DLK D I+ ++HPGWV+TDMGG+ APL+V A GI+ + L E NG
Sbjct: 182 LNMITRCLAADLKSDGILCISLHPGWVQTDMGGNMAPLQVQEAIPGILSVLDRLSEKENG 241
Query: 238 GFFEYTGKAI 247
F ++ G+ +
Sbjct: 242 SFLDWQGETL 251
|
|
| ZFIN|ZDB-GENE-050419-83 si:dkey-12e7.4 "si:dkey-12e7.4" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 415 (151.1 bits), Expect = 7.8e-39, P = 7.8e-39
Identities = 92/250 (36%), Positives = 143/250 (57%)
Query: 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDV 62
+++ITG +RGLGL +++ LV G P I AT RN + A EL LA+++ N+H+I+LDV
Sbjct: 10 NLMITGASRGLGLQIVESLV-TGGFSPGKIIATARNPNGAKELQRLAEEYQNIHIIKLDV 68
Query: 63 TDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVXXXXX 122
+ + ++ ++V+++GLN L+NNAGI L + +QM ++F N
Sbjct: 69 IS-QESIERAAAEVEELVQEEGLNCLINNAGINV-VANLETVTADQMLENFHTN--SVAP 124
Query: 123 XXXXXXXXXXXXSEANSAAPLGSSRAAIVNVSSIMGSIE----DNTQG-GFHPYRCSKAA 177
A +G RAA++NV+S++GS+E D ++PYR SK+A
Sbjct: 125 LMITKAMLPLLKRAAAKGTGMGIHRAAVINVTSLLGSVELYWGDRADTFKWYPYRTSKSA 184
Query: 178 LNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQSLGEAHNG 237
LN TR L++DL+ D I+ A+HPGWV+TDMGG APL + + ++ I L E +G
Sbjct: 185 LNMVTRCLAVDLEADGILCMALHPGWVRTDMGGPEAPLSPEESISSVLSVIGGLTEKDHG 244
Query: 238 GFFEYTGKAI 247
F YTG+ +
Sbjct: 245 SFLHYTGETL 254
|
|
| UNIPROTKB|F1N9C1 LOC415661 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 392 (143.0 bits), Expect = 2.1e-36, P = 2.1e-36
Identities = 92/255 (36%), Positives = 142/255 (55%)
Query: 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNK--DKAVELLALAQQHSNLHVI 58
++S+L+TG NRG+GLG ++ L+ L +N P +FATCR+ +A EL LA +H NL ++
Sbjct: 1 VRSVLVTGANRGIGLGFVQHLLAL-SNPPEWVFATCRDPKGQRAQELQKLASKHPNLVIV 59
Query: 59 ELDVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVX 118
L+VTD + + + + +K GLN+L+NNAGIA T + + M++ + N
Sbjct: 60 PLEVTDPASIKAAA-ASVGERLKGSGLNLLINNAGIARANT-IDNETLKDMSEVYTTNTI 117
Query: 119 XXXXXXXXXXXXXXXXSEANSAAPLGSSRAAIVNVSSIMGSIEDN---TQGGFHPYRCSK 175
++ N + L S+AAI+N+SS GSI+D G YRCSK
Sbjct: 118 APLLLSQAFLPMLKKAAQENPGSGLSCSKAAIINISSTAGSIQDLYLWQYGQALSYRCSK 177
Query: 176 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS---NAPLEVGAATAGIIQFIQSLG 232
AALN TR S+ + I A+HPGWVKTDMGG+ + + V + G+++ + +L
Sbjct: 178 AALNMLTRCQSMGYREHGIFCVALHPGWVKTDMGGTLEDKSRVTVDESVGGMLKVLSNLS 237
Query: 233 EAHNGGFFEYTGKAI 247
E +G F + GK +
Sbjct: 238 EKDSGAFLNWEGKVM 252
|
|
| WB|WBGene00008332 C55A6.3 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
|---|
Score = 390 (142.3 bits), Expect = 3.5e-36, P = 3.5e-36
Identities = 93/242 (38%), Positives = 132/242 (54%)
Query: 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDV 62
S+++TG NRG+GLG++K V N + HI AT R+ +KA +L ++ LHVI L +
Sbjct: 5 SVVVTGANRGIGLGLVKQFVKDKNIR--HIIATARDVEKATDLKSI--NDPRLHVIPLAL 60
Query: 63 TDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVXXXXX 122
T K D + D+V GLN+LVNNAG A K++ ++ + F VN
Sbjct: 61 T-CDKSMDKFVSKVGDIVGSDGLNLLVNNAGSAVKYSTKAEPSRAKLVEQFDVNTFSVVI 119
Query: 123 XXXXXXXXXXXXSEANSAAPLGSSRAAIVNVSSIMGSIEDNTQG-GFHP---YRCSKAAL 178
S S L SRAA+V +SS +GSI +NT G G YR SK+A+
Sbjct: 120 LSQKLLPLLTKASSKVSGDELSVSRAAVVTISSGLGSITENTSGSGVIEGLAYRMSKSAV 179
Query: 179 NAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQSLGEAHNGG 238
N R+ +ID+K D I+A PGWV+TDMGG +A L V +T+ ++ L + HNGG
Sbjct: 180 NMFARTFAIDMKDDYILAANFCPGWVQTDMGGKHAALTVEQSTSQLVSSFNKLDKTHNGG 239
Query: 239 FF 240
+F
Sbjct: 240 YF 241
|
|
| ZFIN|ZDB-GENE-050417-323 zgc:110339 "zgc:110339" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 387 (141.3 bits), Expect = 7.2e-36, P = 7.2e-36
Identities = 91/247 (36%), Positives = 134/247 (54%)
Query: 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDV 62
S+LITG +RGLGL M+K L+ +P I AT RN A EL LA+ H ++H++ LD+
Sbjct: 10 SVLITGASRGLGLQMVKQLLATPE-RPQKIIATVRNPAAAEELQKLAKAHPDVHIVTLDI 68
Query: 63 TDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVXXXXX 122
++ + + + +V GLN L+NNA I + + M + V
Sbjct: 69 SN-ETSVNAASQAVEAIVGANGLNCLINNAAIGLSSDLDSVTRDVMMKTYESNTVSPLFV 127
Query: 123 XXXXXXXXXXXXSEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGG--F--HPYRCSKAAL 178
+E + + RAA+VNVSS++GS++ N G F + YR SK+AL
Sbjct: 128 TKALLPLLRRAAAEGSG---MSIQRAAVVNVSSLLGSVQLNWGEGASFKSYAYRASKSAL 184
Query: 179 NAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQSLGEAHNGG 238
N TR L+ DL+ D I+ A+HPGWV+TDMGG APL + + ++ I L E H+GG
Sbjct: 185 NMVTRCLAADLEADGILCVALHPGWVRTDMGGPMAPLSPEESISSVLSVIAGLKEEHHGG 244
Query: 239 FFEYTGK 245
+ +YTGK
Sbjct: 245 YVDYTGK 251
|
|
| WB|WBGene00008335 C55A6.6 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
|---|
Score = 379 (138.5 bits), Expect = 5.1e-35, P = 5.1e-35
Identities = 94/246 (38%), Positives = 134/246 (54%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
KS++ITG NRG+GLG+++ V + HI AT R+ +KA +L A+ H +HV+ L
Sbjct: 4 KSVVITGANRGIGLGLVQEFVK--DKNILHIIATVRDVEKATDLKAINDPH--VHVLPLI 59
Query: 62 VTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQ--MTDHFLVNVXX 119
VT K D + ++V GLN+LVNNAGIA K+ L KP + + + VN
Sbjct: 60 VT-CDKSIDSFVTKVEEIVGSDGLNLLVNNAGIAVKY--LTKTKPNRSMIAEQLDVNTTS 116
Query: 120 XXXXXXXXXXXXXXXSEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGG--FHP--YRCSK 175
+ S L SRAA++ +SS +GSI +NT G F YR SK
Sbjct: 117 VVILTQKLLPLLTRAASKVSGDQLSVSRAAVITISSGLGSITENTTGSAVFDSLAYRMSK 176
Query: 176 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQSLGEAH 235
AA+N R+L+IDL+ D I+ PGWV+TDMGG A L V +T+ ++ L +H
Sbjct: 177 AAVNMFGRTLAIDLQDDHILVVNFCPGWVQTDMGGQEAMLTVEQSTSELVSSFNKLDNSH 236
Query: 236 NGGFFE 241
NG +F+
Sbjct: 237 NGRYFQ 242
|
|
| ZFIN|ZDB-GENE-070424-53 zgc:163083 "zgc:163083" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 379 (138.5 bits), Expect = 5.1e-35, P = 5.1e-35
Identities = 95/251 (37%), Positives = 135/251 (53%)
Query: 4 ILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKD--KAVELLALAQQHSNL-HVIEL 60
ILITG NRGLGL M+K L N+ P HIFATCR+ D K+ L LA++H NL +I L
Sbjct: 9 ILITGANRGLGLEMVKQLSE--NSCPKHIFATCRDPDGPKSAALRELAKKHPNLITIIRL 66
Query: 61 DVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVXXX 120
D D ++ K + +V GLN+LVNNA I A T + E + + F NV
Sbjct: 67 DADDPCSIKESA-KKVGSLVGANGLNLLVNNAAIVANGT-IQTSSVEDLKNTFNTNVIGP 124
Query: 121 XXXXXXXXXXXXXXSEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFH----PYRCSKA 176
++A+ + S +AAI+N+S++ S+ H PY SKA
Sbjct: 125 LLIIREYRPYLQIAAKASGTPGMSSKKAAIINISTVAASMTRMPPIYSHFQTLPYAVSKA 184
Query: 177 ALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQSLGEAHN 236
N T + ++K D+I+ A+HPGWVKTD+GG +A LE + G+++ I L E +
Sbjct: 185 GFNMLTVLAAEEVKTDEILCMALHPGWVKTDLGGQDATLEPNESVEGMLKVIGGLTEKQH 244
Query: 237 GGFFEYTGKAI 247
GGF +YTG +
Sbjct: 245 GGFLDYTGATV 255
|
|
| WB|WBGene00008333 C55A6.4 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
|---|
Score = 376 (137.4 bits), Expect = 1.1e-34, P = 1.1e-34
Identities = 92/246 (37%), Positives = 132/246 (53%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
KS++ITG NRG+GLG+++ V N + HI AT R+ +KA +L A++ + ++L+
Sbjct: 4 KSVVITGANRGIGLGLVQEFVKDKNIR--HIIATARDVEKATDLKAISDPR--VTALQLE 59
Query: 62 VTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQ--MTDHFLVNVXX 119
VT K D + ++V GLN+LVNNAG A + KP + + VN
Sbjct: 60 VT-CDKSMDTFVSKVEEIVGSDGLNLLVNNAGNAVDYPCKA--KPNRALFAEQLNVNTTS 116
Query: 120 XXXXXXXXXXXXXXXSEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHP----YRCSK 175
S S L +SRAA+V +SS + S+ D GG P YR SK
Sbjct: 117 VVILTQKLMPLLIKASSKVSGDQLSASRAAVVTISSGLASMTDFATGGHAPNAFAYRISK 176
Query: 176 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQSLGEAH 235
AA+N R+L+ D+K D I+ ++ PGWVKTDMGG A L V +TA ++ L +H
Sbjct: 177 AAINMFGRALANDMKDDHILVASIGPGWVKTDMGGEKALLTVEQSTAELVASFNKLNNSH 236
Query: 236 NGGFFE 241
NGGFF+
Sbjct: 237 NGGFFQ 242
|
|
| UNIPROTKB|F1NFS8 LOC100857820 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 375 (137.1 bits), Expect = 1.3e-34, P = 1.3e-34
Identities = 92/257 (35%), Positives = 140/257 (54%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNK--DKAVELLALAQQHSNLHVIE 59
+S+L+TG NRG+GLG+++ L+ L N P +FATCR+ +A EL LA +H NL ++
Sbjct: 27 RSVLVTGANRGIGLGLVQHLLALPN-PPEWVFATCRDPKGQRAQELQKLASKHPNLVIVP 85
Query: 60 LDVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTD--H-FLVN 116
L+VTD + + + + +K GLN+L+NNAG+ T L+ E + D H + N
Sbjct: 86 LEVTDPASIKAAA-ASVGERLKGSGLNLLINNAGVLNANT----LETETLKDMLHVYTTN 140
Query: 117 VXXXXXXXXXXXXXXXXXSEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHP---YRC 173
++ + + + S+AAIVN+SSI GSI T YRC
Sbjct: 141 TIAPLLLSQAFLPLLKKAAQESPGSGMSCSKAAIVNISSIGGSISSLTGWDVMELVSYRC 200
Query: 174 SKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMG---GSNAPLEVGAATAGIIQFIQS 230
SKAA N TR S+ + I+ A+HPGWV+TDMG G PL V A+ G+++ + +
Sbjct: 201 SKAAQNMLTRCQSMGYREHGILCVALHPGWVQTDMGNVAGRTPPLTVDASVGGMLKVLSN 260
Query: 231 LGEAHNGGFFEYTGKAI 247
L E +G F ++ G +
Sbjct: 261 LSEKDSGAFLDWEGNPV 277
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q7Z9I4 | YCP6_SCHPO | 1, ., -, ., -, ., - | 0.2862 | 0.8991 | 0.8814 | yes | N/A |
| P36086 | YKH1_YEAST | No assigned EC number | 0.2813 | 0.8991 | 0.8710 | yes | N/A |
| P37959 | YUSZ_BACSU | 1, ., -, ., -, ., - | 0.3165 | 0.7137 | 0.6321 | yes | N/A |
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 1.1.1 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 248 | |||
| cd05325 | 233 | cd05325, carb_red_sniffer_like_SDR_c, carbonyl red | 7e-83 | |
| cd05324 | 225 | cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu | 1e-50 | |
| PRK08177 | 225 | PRK08177, PRK08177, short chain dehydrogenase; Pro | 2e-38 | |
| cd05233 | 234 | cd05233, SDR_c, classical (c) SDRs | 7e-35 | |
| COG1028 | 251 | COG1028, FabG, Dehydrogenases with different speci | 6e-33 | |
| PRK06953 | 222 | PRK06953, PRK06953, short chain dehydrogenase; Pro | 3e-31 | |
| cd05374 | 248 | cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster | 2e-30 | |
| cd05327 | 269 | cd05327, retinol-DH_like_SDR_c_like, retinol dehyd | 7e-26 | |
| PRK12826 | 251 | PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote | 7e-25 | |
| PRK05653 | 246 | PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) | 3e-24 | |
| cd09805 | 281 | cd09805, type2_17beta_HSD-like_SDR_c, human 17beta | 3e-24 | |
| COG0300 | 265 | COG0300, DltE, Short-chain dehydrogenases of vario | 8e-24 | |
| cd05354 | 235 | cd05354, SDR_c7, classical (c) SDR, subgroup 7 | 3e-23 | |
| PRK06914 | 280 | PRK06914, PRK06914, short chain dehydrogenase; Pro | 6e-22 | |
| PRK09072 | 263 | PRK09072, PRK09072, short chain dehydrogenase; Pro | 1e-21 | |
| cd08932 | 223 | cd08932, HetN_like_SDR_c, HetN oxidoreductase-like | 1e-21 | |
| PRK09242 | 257 | PRK09242, PRK09242, tropinone reductase; Provision | 3e-21 | |
| cd05367 | 241 | cd05367, SPR-like_SDR_c, sepiapterin reductase (SP | 6e-21 | |
| PRK08264 | 238 | PRK08264, PRK08264, short chain dehydrogenase; Val | 6e-21 | |
| PRK06924 | 251 | PRK06924, PRK06924, short chain dehydrogenase; Pro | 7e-21 | |
| PRK09009 | 235 | PRK09009, PRK09009, C factor cell-cell signaling p | 8e-21 | |
| cd05329 | 251 | cd05329, TR_SDR_c, tropinone reductase-I and II (T | 9e-21 | |
| cd05346 | 249 | cd05346, SDR_c5, classical (c) SDR, subgroup 5 | 1e-19 | |
| cd05364 | 253 | cd05364, SDR_c11, classical (c) SDR, subgroup 11 | 3e-19 | |
| PRK08219 | 227 | PRK08219, PRK08219, short chain dehydrogenase; Pro | 2e-18 | |
| cd05333 | 240 | cd05333, BKR_SDR_c, beta-Keto acyl carrier protein | 3e-18 | |
| cd05347 | 248 | cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena | 6e-18 | |
| PRK12825 | 249 | PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) | 9e-18 | |
| PRK07231 | 251 | PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) | 2e-17 | |
| TIGR01830 | 239 | TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier | 2e-17 | |
| PRK05557 | 248 | PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) | 3e-17 | |
| PRK06181 | 263 | PRK06181, PRK06181, short chain dehydrogenase; Pro | 3e-17 | |
| cd05370 | 228 | cd05370, SDR_c2, classical (c) SDR, subgroup 2 | 4e-17 | |
| cd05350 | 239 | cd05350, SDR_c6, classical (c) SDR, subgroup 6 | 1e-16 | |
| PRK06180 | 277 | PRK06180, PRK06180, short chain dehydrogenase; Pro | 2e-16 | |
| COG3967 | 245 | COG3967, DltE, Short-chain dehydrogenase involved | 2e-16 | |
| PRK05565 | 247 | PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) | 4e-16 | |
| cd05339 | 243 | cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy | 7e-16 | |
| PRK07326 | 237 | PRK07326, PRK07326, short chain dehydrogenase; Pro | 1e-15 | |
| cd08942 | 250 | cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy | 2e-15 | |
| COG4221 | 246 | COG4221, COG4221, Short-chain alcohol dehydrogenas | 2e-15 | |
| cd05332 | 257 | cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste | 2e-15 | |
| PRK05693 | 274 | PRK05693, PRK05693, short chain dehydrogenase; Pro | 1e-14 | |
| PRK12829 | 264 | PRK12829, PRK12829, short chain dehydrogenase; Pro | 1e-14 | |
| cd05351 | 244 | cd05351, XR_like_SDR_c, xylulose reductase-like, c | 2e-14 | |
| PRK06463 | 255 | PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) | 2e-14 | |
| PRK12828 | 239 | PRK12828, PRK12828, short chain dehydrogenase; Pro | 2e-14 | |
| cd05356 | 239 | cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst | 4e-14 | |
| pfam00106 | 167 | pfam00106, adh_short, short chain dehydrogenase | 1e-13 | |
| PRK12824 | 245 | PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro | 1e-13 | |
| cd05341 | 247 | cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta | 2e-13 | |
| PRK06550 | 235 | PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) | 2e-13 | |
| PRK08267 | 260 | PRK08267, PRK08267, short chain dehydrogenase; Pro | 3e-13 | |
| PRK08017 | 256 | PRK08017, PRK08017, oxidoreductase; Provisional | 4e-13 | |
| PRK12827 | 249 | PRK12827, PRK12827, short chain dehydrogenase; Pro | 7e-13 | |
| cd09806 | 258 | cd09806, type1_17beta-HSD-like_SDR_c, human estrog | 7e-13 | |
| PRK08251 | 248 | PRK08251, PRK08251, short chain dehydrogenase; Pro | 9e-13 | |
| PRK12745 | 256 | PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote | 2e-12 | |
| cd05323 | 244 | cd05323, ADH_SDR_c_like, insect type alcohol dehyd | 3e-12 | |
| PRK06484 | 520 | PRK06484, PRK06484, short chain dehydrogenase; Val | 3e-12 | |
| cd05366 | 257 | cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol | 4e-12 | |
| cd09807 | 274 | cd09807, retinol-DH_like_SDR_c, retinol dehydrogen | 4e-12 | |
| PRK09135 | 249 | PRK09135, PRK09135, pteridine reductase; Provision | 4e-12 | |
| cd08929 | 226 | cd08929, SDR_c4, classical (c) SDR, subgroup 4 | 5e-12 | |
| PRK12939 | 250 | PRK12939, PRK12939, short chain dehydrogenase; Pro | 5e-12 | |
| cd05352 | 252 | cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M | 5e-12 | |
| PRK07577 | 234 | PRK07577, PRK07577, short chain dehydrogenase; Pro | 2e-11 | |
| cd08951 | 260 | cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13 | 2e-11 | |
| cd05337 | 255 | cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl | 2e-11 | |
| cd05368 | 241 | cd05368, DHRS6_like_SDR_c, human DHRS6-like, class | 2e-11 | |
| PRK07023 | 243 | PRK07023, PRK07023, short chain dehydrogenase; Pro | 4e-11 | |
| cd05362 | 243 | cd05362, THN_reductase-like_SDR_c, tetrahydroxynap | 5e-11 | |
| cd05365 | 242 | cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi | 6e-11 | |
| PRK08226 | 263 | PRK08226, PRK08226, short chain dehydrogenase; Pro | 7e-11 | |
| PRK07060 | 245 | PRK07060, PRK07060, short chain dehydrogenase; Pro | 8e-11 | |
| PRK07069 | 251 | PRK07069, PRK07069, short chain dehydrogenase; Val | 8e-11 | |
| PRK08265 | 261 | PRK08265, PRK08265, short chain dehydrogenase; Pro | 8e-11 | |
| PRK06124 | 256 | PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro | 8e-11 | |
| TIGR01963 | 255 | TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase | 1e-10 | |
| PRK08263 | 275 | PRK08263, PRK08263, short chain dehydrogenase; Pro | 3e-10 | |
| cd05357 | 234 | cd05357, PR_SDR_c, pteridine reductase (PR), class | 3e-10 | |
| PRK06398 | 258 | PRK06398, PRK06398, aldose dehydrogenase; Validate | 3e-10 | |
| cd05345 | 248 | cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl | 4e-10 | |
| cd05355 | 270 | cd05355, SDR_c1, classical (c) SDR, subgroup 1 | 4e-10 | |
| PRK07890 | 258 | PRK07890, PRK07890, short chain dehydrogenase; Pro | 5e-10 | |
| cd05349 | 246 | cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl | 6e-10 | |
| TIGR01829 | 242 | TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta | 6e-10 | |
| PRK08063 | 250 | PRK08063, PRK08063, enoyl-(acyl carrier protein) r | 7e-10 | |
| cd08934 | 243 | cd08934, CAD_SDR_c, clavulanic acid dehydrogenase | 8e-10 | |
| PRK06198 | 260 | PRK06198, PRK06198, short chain dehydrogenase; Pro | 1e-09 | |
| PRK07454 | 241 | PRK07454, PRK07454, short chain dehydrogenase; Pro | 1e-09 | |
| cd08939 | 239 | cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine | 1e-09 | |
| PRK06482 | 276 | PRK06482, PRK06482, short chain dehydrogenase; Pro | 1e-09 | |
| PRK08217 | 253 | PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) | 2e-09 | |
| PRK06182 | 273 | PRK06182, PRK06182, short chain dehydrogenase; Val | 2e-09 | |
| PRK07825 | 273 | PRK07825, PRK07825, short chain dehydrogenase; Pro | 3e-09 | |
| cd05344 | 253 | cd05344, BKR_like_SDR_like, putative beta-ketoacyl | 3e-09 | |
| PRK08085 | 254 | PRK08085, PRK08085, gluconate 5-dehydrogenase; Pro | 6e-09 | |
| cd08944 | 246 | cd08944, SDR_c12, classical (c) SDR, subgroup 12 | 1e-08 | |
| PRK06123 | 248 | PRK06123, PRK06123, short chain dehydrogenase; Pro | 1e-08 | |
| PRK07814 | 263 | PRK07814, PRK07814, short chain dehydrogenase; Pro | 2e-08 | |
| PRK08945 | 247 | PRK08945, PRK08945, putative oxoacyl-(acyl carrier | 2e-08 | |
| cd08936 | 256 | cd08936, CR_SDR_c, Porcine peroxisomal carbonyl re | 2e-08 | |
| cd08933 | 261 | cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl | 2e-08 | |
| PRK09291 | 257 | PRK09291, PRK09291, short chain dehydrogenase; Pro | 2e-08 | |
| cd09761 | 242 | cd09761, A3DFK9-like_SDR_c, Clostridium thermocell | 3e-08 | |
| PRK09730 | 247 | PRK09730, PRK09730, putative NAD(P)-binding oxidor | 3e-08 | |
| PRK12481 | 251 | PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrog | 3e-08 | |
| PRK06179 | 270 | PRK06179, PRK06179, short chain dehydrogenase; Pro | 4e-08 | |
| cd08940 | 258 | cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge | 5e-08 | |
| PRK08628 | 258 | PRK08628, PRK08628, short chain dehydrogenase; Pro | 6e-08 | |
| cd08941 | 290 | cd08941, 3KS_SDR_c, 3-keto steroid reductase, clas | 9e-08 | |
| PRK12742 | 237 | PRK12742, PRK12742, oxidoreductase; Provisional | 1e-07 | |
| cd05343 | 250 | cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c | 1e-07 | |
| PRK06484 | 520 | PRK06484, PRK06484, short chain dehydrogenase; Val | 2e-07 | |
| PRK06113 | 255 | PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro | 2e-07 | |
| cd08937 | 256 | cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa | 2e-07 | |
| TIGR03971 | 265 | TIGR03971, SDR_subfam_1, oxidoreductase, SDR famil | 2e-07 | |
| TIGR01832 | 248 | TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogena | 2e-07 | |
| TIGR02415 | 254 | TIGR02415, 23BDH, acetoin reductases | 2e-07 | |
| cd08930 | 250 | cd08930, SDR_c8, classical (c) SDR, subgroup 8 | 2e-07 | |
| PRK06101 | 240 | PRK06101, PRK06101, short chain dehydrogenase; Pro | 2e-07 | |
| PRK12429 | 258 | PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas | 3e-07 | |
| PRK08589 | 272 | PRK08589, PRK08589, short chain dehydrogenase; Val | 3e-07 | |
| PRK06171 | 266 | PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro | 3e-07 | |
| PRK12746 | 254 | PRK12746, PRK12746, short chain dehydrogenase; Pro | 3e-07 | |
| PRK06949 | 258 | PRK06949, PRK06949, short chain dehydrogenase; Pro | 3e-07 | |
| cd08931 | 227 | cd08931, SDR_c9, classical (c) SDR, subgroup 9 | 4e-07 | |
| PRK05717 | 255 | PRK05717, PRK05717, oxidoreductase; Validated | 4e-07 | |
| cd05340 | 236 | cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li | 4e-07 | |
| PRK06197 | 306 | PRK06197, PRK06197, short chain dehydrogenase; Pro | 4e-07 | |
| PRK05993 | 277 | PRK05993, PRK05993, short chain dehydrogenase; Pro | 4e-07 | |
| PRK06077 | 252 | PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) | 4e-07 | |
| PRK07201 | 657 | PRK07201, PRK07201, short chain dehydrogenase; Pro | 5e-07 | |
| PRK06138 | 252 | PRK06138, PRK06138, short chain dehydrogenase; Pro | 5e-07 | |
| TIGR04316 | 250 | TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben | 6e-07 | |
| PRK12747 | 252 | PRK12747, PRK12747, short chain dehydrogenase; Pro | 7e-07 | |
| PRK07856 | 252 | PRK07856, PRK07856, short chain dehydrogenase; Pro | 7e-07 | |
| PRK07666 | 239 | PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) | 7e-07 | |
| PRK06701 | 290 | PRK06701, PRK06701, short chain dehydrogenase; Pro | 8e-07 | |
| cd09808 | 255 | cd09808, DHRS-12_like_SDR_c-like, human dehydrogen | 8e-07 | |
| PLN02780 | 320 | PLN02780, PLN02780, ketoreductase/ oxidoreductase | 1e-06 | |
| PRK05650 | 270 | PRK05650, PRK05650, short chain dehydrogenase; Pro | 1e-06 | |
| cd08945 | 258 | cd08945, PKR_SDR_c, Polyketide ketoreductase, clas | 1e-06 | |
| PRK12935 | 247 | PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro | 1e-06 | |
| PRK06500 | 249 | PRK06500, PRK06500, short chain dehydrogenase; Pro | 1e-06 | |
| PRK08220 | 252 | PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy | 2e-06 | |
| PRK07063 | 260 | PRK07063, PRK07063, short chain dehydrogenase; Pro | 2e-06 | |
| PRK12748 | 256 | PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-prote | 2e-06 | |
| PRK08324 | 681 | PRK08324, PRK08324, short chain dehydrogenase; Val | 2e-06 | |
| PRK05786 | 238 | PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein) | 2e-06 | |
| cd05358 | 253 | cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc | 2e-06 | |
| PRK10538 | 248 | PRK10538, PRK10538, malonic semialdehyde reductase | 4e-06 | |
| PRK07074 | 257 | PRK07074, PRK07074, short chain dehydrogenase; Pro | 5e-06 | |
| cd05359 | 242 | cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c | 5e-06 | |
| PRK08643 | 256 | PRK08643, PRK08643, acetoin reductase; Validated | 7e-06 | |
| PRK06947 | 248 | PRK06947, PRK06947, glucose-1-dehydrogenase; Provi | 7e-06 | |
| cd09763 | 265 | cd09763, DHRS1-like_SDR_c, human dehydrogenase/red | 9e-06 | |
| PRK05875 | 276 | PRK05875, PRK05875, short chain dehydrogenase; Pro | 9e-06 | |
| PRK07774 | 250 | PRK07774, PRK07774, short chain dehydrogenase; Pro | 1e-05 | |
| PRK08261 | 450 | PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) | 1e-05 | |
| PRK07035 | 252 | PRK07035, PRK07035, short chain dehydrogenase; Pro | 2e-05 | |
| cd05371 | 252 | cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr | 2e-05 | |
| TIGR01831 | 239 | TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-prote | 2e-05 | |
| cd05338 | 246 | cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena | 4e-05 | |
| PRK06523 | 260 | PRK06523, PRK06523, short chain dehydrogenase; Pro | 4e-05 | |
| cd05331 | 244 | cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz | 6e-05 | |
| PRK12743 | 256 | PRK12743, PRK12743, oxidoreductase; Provisional | 6e-05 | |
| PRK08213 | 259 | PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro | 7e-05 | |
| PRK07067 | 257 | PRK07067, PRK07067, sorbitol dehydrogenase; Provis | 7e-05 | |
| PRK06200 | 263 | PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydropheny | 9e-05 | |
| PRK06194 | 287 | PRK06194, PRK06194, hypothetical protein; Provisio | 9e-05 | |
| PRK12937 | 245 | PRK12937, PRK12937, short chain dehydrogenase; Pro | 1e-04 | |
| cd05326 | 249 | cd05326, secoisolariciresinol-DH_like_SDR_c, secoi | 1e-04 | |
| PRK08642 | 253 | PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) | 1e-04 | |
| PRK05866 | 293 | PRK05866, PRK05866, short chain dehydrogenase; Pro | 1e-04 | |
| PRK07453 | 322 | PRK07453, PRK07453, protochlorophyllide oxidoreduc | 2e-04 | |
| TIGR01500 | 256 | TIGR01500, sepiapter_red, sepiapterin reductase | 2e-04 | |
| PRK12936 | 245 | PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-prote | 2e-04 | |
| PRK06125 | 259 | PRK06125, PRK06125, short chain dehydrogenase; Pro | 3e-04 | |
| PRK06128 | 300 | PRK06128, PRK06128, oxidoreductase; Provisional | 3e-04 | |
| PRK09134 | 258 | PRK09134, PRK09134, short chain dehydrogenase; Pro | 3e-04 | |
| PRK06114 | 254 | PRK06114, PRK06114, short chain dehydrogenase; Pro | 3e-04 | |
| cd08943 | 250 | cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al | 5e-04 | |
| cd09810 | 311 | cd09810, LPOR_like_SDR_c_like, light-dependent pro | 8e-04 | |
| PRK12859 | 256 | PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-prote | 0.001 | |
| cd05348 | 257 | cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydro | 0.001 | |
| PRK07097 | 265 | PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro | 0.001 | |
| PRK05854 | 313 | PRK05854, PRK05854, short chain dehydrogenase; Pro | 0.002 | |
| cd02266 | 186 | cd02266, SDR, Short-chain dehydrogenases/reductase | 0.002 | |
| cd09809 | 284 | cd09809, human_WWOX_like_SDR_c-like, human WWOX (W | 0.002 | |
| cd05369 | 249 | cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta | 0.002 | |
| PRK06172 | 253 | PRK06172, PRK06172, short chain dehydrogenase; Pro | 0.002 | |
| PRK05872 | 296 | PRK05872, PRK05872, short chain dehydrogenase; Pro | 0.003 | |
| PRK07775 | 274 | PRK07775, PRK07775, short chain dehydrogenase; Pro | 0.003 | |
| PRK08703 | 239 | PRK08703, PRK08703, short chain dehydrogenase; Pro | 0.003 | |
| cd05363 | 254 | cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), | 0.004 | |
| PRK12823 | 260 | PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1 | 0.004 |
| >gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 247 bits (632), Expect = 7e-83
Identities = 103/248 (41%), Positives = 149/248 (60%), Gaps = 21/248 (8%)
Query: 4 ILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVT 63
+LITG +RG+GL +++ L+ + ATCR+ A EL AL HS LH++ELDVT
Sbjct: 1 VLITGASRGIGLELVRQLL---ARGNNTVIATCRDPSAATELAALGASHSRLHILELDVT 57
Query: 64 DFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLML 123
D + + +++ + D GL+VL+NNAGI + + E + + F VNV PL+L
Sbjct: 58 DEIAES---AEAVAERLGDAGLDVLINNAGILHSYGPASEVDSEDLLEVFQVNVLGPLLL 114
Query: 124 TKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNAATR 183
T+ LPLL K +RA I+N+SS +GSI DNT GG++ YR SKAALN T+
Sbjct: 115 TQAFLPLLLK-----------GARAKIINISSRVGSIGDNTSGGWYSYRASKAALNMLTK 163
Query: 184 SLSIDLKGDKIIATAMHPGWVKTDMGGSNA----PLEVGAATAGIIQFIQSLGEAHNGGF 239
SL+++LK D I ++HPGWV+TDMGG A P+ + AG+++ I +L E +G F
Sbjct: 164 SLAVELKRDGITVVSLHPGWVRTDMGGPFAKNKGPITPEESVAGLLKVIDNLNEEDSGKF 223
Query: 240 FEYTGKAI 247
+Y G I
Sbjct: 224 LDYDGTEI 231
|
Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233 |
| >gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 164 bits (418), Expect = 1e-50
Identities = 79/247 (31%), Positives = 110/247 (44%), Gaps = 25/247 (10%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIEL 60
K L+TG NRG+G +++ L G + T R+ ++ + L + ++ +L
Sbjct: 1 KVALVTGANRGIGFEIVRQLAKSGPG---TVILTARDVERGQAAVEKLRAEGLSVRFHQL 57
Query: 61 DVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAP 120
DVTD + + + K GL++LVNNAGIA K EQ + N
Sbjct: 58 DVTD-DASIEAAADFVEE--KYGGLDILVNNAGIAFKGFDDSTPTREQARETMKTNFFGT 114
Query: 121 LMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNA 180
+ +T+ +LPLLKK S IVNVSS +GS+ Y SKAALNA
Sbjct: 115 VDVTQALLPLLKK-----------SPAGRIVNVSSGLGSLTS-------AYGVSKAALNA 156
Query: 181 ATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQSLGEAHNGGFF 240
TR L+ +LK I A PGWVKTDMGG AP + + G F
Sbjct: 157 LTRILAKELKETGIKVNACCPGWVKTDMGGGKAPKTPEEGAETPVYLALLPPDGEPTGKF 216
Query: 241 EYTGKAI 247
K +
Sbjct: 217 FSDKKVV 223
|
PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225 |
| >gnl|CDD|236173 PRK08177, PRK08177, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 133 bits (336), Expect = 2e-38
Identities = 75/252 (29%), Positives = 118/252 (46%), Gaps = 34/252 (13%)
Query: 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIEL 60
++ LI G +RGLGLG++ L + + AT R + L AL H + +L
Sbjct: 1 KRTALIIGASRGLGLGLVDRL----LERGWQVTATVRGPQQDTALQALPGVH----IEKL 52
Query: 61 DVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIA-AKFTRLGLLKPEQMTDHFLVNVTA 119
D+ D + + ++ Q ++L NAGI+ ++ FL N A
Sbjct: 53 DMND---PASL--DQLLQRLQGQRFDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIA 107
Query: 120 PLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALN 179
P+ L + +L ++ + +SS +GS+E G Y+ SKAALN
Sbjct: 108 PIRLARRLLGQVRPGQ------------GVLAFMSSQLGSVELPDGGEMPLYKASKAALN 155
Query: 180 AATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQSLGEAHNG-- 237
+ TRS +L + +MHPGWVKTDMGG NAPL+V + G+++ I EA +G
Sbjct: 156 SMTRSFVAELGEPTLTVLSMHPGWVKTDMGGDNAPLDVETSVKGLVEQI----EAASGKG 211
Query: 238 --GFFEYTGKAI 247
F +Y G+ +
Sbjct: 212 GHRFIDYQGETL 223
|
Length = 225 |
| >gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 124 bits (313), Expect = 7e-35
Identities = 68/222 (30%), Positives = 99/222 (44%), Gaps = 22/222 (9%)
Query: 4 ILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVT 63
L+TG + G+G + + L G A + RN++ EL A+ N ++ DV+
Sbjct: 1 ALVTGASSGIGRAIARRLAREG----AKVVLADRNEEALAELAAIEALGGNAVAVQADVS 56
Query: 64 DFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLML 123
D + + L ++ + + L++LVNNAGIA + L L E VN+T +L
Sbjct: 57 D-EEDVEALVEEA--LEEFGRLDILVNNAGIA-RPGPLEELTDEDWDRVLDVNLTGVFLL 112
Query: 124 TKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNAATR 183
T+ LP +KK IVN+SS+ G G Y SKAAL TR
Sbjct: 113 TRAALPHMKK-----------QGGGRIVNISSVAGLR---PLPGQAAYAASKAALEGLTR 158
Query: 184 SLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGII 225
SL+++L I A+ PG V T M P E A I
Sbjct: 159 SLALELAPYGIRVNAVAPGLVDTPMLAKLGPEEAEKELAAAI 200
|
SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234 |
| >gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Score = 119 bits (301), Expect = 6e-33
Identities = 58/210 (27%), Positives = 90/210 (42%), Gaps = 23/210 (10%)
Query: 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQ--HSNLHVI 58
K L+TG + G+G + + L G + A ++ A L A ++ +
Sbjct: 5 GKVALVTGASSGIGRAIARALAREGAR--VVVAARRSEEEAAEALAAAIKEAGGGRAAAV 62
Query: 59 ELDVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVT 118
DV+D + + L + +++LVNNAGIA L L E VN+
Sbjct: 63 AADVSDDEESVEALVAAAEEEF--GRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLL 120
Query: 119 APLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAAL 178
+LT+ LPL+KK IVN+SS+ G G Y SKAAL
Sbjct: 121 GAFLLTRAALPLMKKQR--------------IVNISSVAGLG---GPPGQAAYAASKAAL 163
Query: 179 NAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
T++L+++L I A+ PG++ T M
Sbjct: 164 IGLTKALALELAPRGIRVNAVAPGYIDTPM 193
|
Length = 251 |
| >gnl|CDD|180774 PRK06953, PRK06953, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 114 bits (287), Expect = 3e-31
Identities = 78/250 (31%), Positives = 114/250 (45%), Gaps = 33/250 (13%)
Query: 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIEL 60
MK++LI G +RG+G ++ G + AT R+ L AL + L
Sbjct: 1 MKTVLIVGASRGIGREFVRQYRADGWR----VIATARDAAALAALQALGA-----EALAL 51
Query: 61 DVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLV---NV 117
DV D + + +K + + L+ V AG+ R ++P D V NV
Sbjct: 52 DVADPASVAGLAWK-----LDGEALDAAVYVAGVYG--PRTEGVEPITREDFDAVMHTNV 104
Query: 118 TAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAA 177
P+ L +LPL++ A + +SS MGSI D T YR SKAA
Sbjct: 105 LGPMQLLPILLPLVEAA------------GGVLAVLSSRMGSIGDATGTTGWLYRASKAA 152
Query: 178 LNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQSLGEAHNG 237
LN A R+ S+ + IA +HPGWV+TDMGG+ A L+ + AG+ + I NG
Sbjct: 153 LNDALRAASLQARHATCIA--LHPGWVRTDMGGAQAALDPAQSVAGMRRVIAQATRRDNG 210
Query: 238 GFFEYTGKAI 247
FF+Y G +
Sbjct: 211 RFFQYDGVEL 220
|
Length = 222 |
| >gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 113 bits (284), Expect = 2e-30
Identities = 76/213 (35%), Positives = 105/213 (49%), Gaps = 24/213 (11%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K +LITGC+ G+GL + L Q + AT RN DK +E L NL V+ELD
Sbjct: 1 KVVLITGCSSGIGLALALALA----AQGYRVIATARNPDK-LESLGELLN-DNLEVLELD 54
Query: 62 VTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPL 121
VTD + K++ + + ++VLVNNAG E++ + F VNV PL
Sbjct: 55 VTD-EESIKAAVKEVIE--RFGRIDVLVNNAGYGLFGPLEETS-IEEVRELFEVNVFGPL 110
Query: 122 MLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNAA 181
+T+ LPL++K GS R IVNVSS+ G + PY SKAAL A
Sbjct: 111 RVTRAFLPLMRKQ---------GSGR--IVNVSSVAGLV---PTPFLGPYCASKAALEAL 156
Query: 182 TRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAP 214
+ SL ++L I T + PG V+T + A
Sbjct: 157 SESLRLELAPFGIKVTIIEPGPVRTGFADNAAG 189
|
17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248 |
| >gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 101 bits (254), Expect = 7e-26
Identities = 65/227 (28%), Positives = 105/227 (46%), Gaps = 45/227 (19%)
Query: 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQ--HSNLHV 57
K ++ITG N G+G + L G AH+ CRN++K E A + ++ ++ + V
Sbjct: 1 GKVVVITGANSGIGKETARELAKRG----AHVIIACRNEEKGEEAAAEIKKETGNAKVEV 56
Query: 58 IELDVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTD-----H 112
I+LD++ ++ L++L+NNAGI + P ++T
Sbjct: 57 IQLDLSSL-ASVRQFAEEFLARFPR--LDILINNAGI--------MAPPRRLTKDGFELQ 105
Query: 113 FLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSI---MGSIEDNTQ---- 165
F VN +LT +LP+LK ++ + IVNVSSI G I+ N
Sbjct: 106 FAVNYLGHFLLTNLLLPVLKASAPSR-----------IVNVSSIAHRAGPIDFNDLDLEN 154
Query: 166 -GGFHPYRC---SKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
+ PY+ SK A TR L+ L+G + A+HPG V+T++
Sbjct: 155 NKEYSPYKAYGQSKLANILFTRELARRLEGTGVTVNALHPGVVRTEL 201
|
Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269 |
| >gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Score = 98.5 bits (246), Expect = 7e-25
Identities = 60/222 (27%), Positives = 84/222 (37%), Gaps = 22/222 (9%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELL-ALAQQHSNLHVIEL 60
+ L+TG RG+G + L G A + D A + ++
Sbjct: 7 RVALVTGAARGIGRAIAVRLAADG----AEVIVVDICGDDAAATAELVEAAGGKARARQV 62
Query: 61 DVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAP 120
DV D V L++LV NAGI T + EQ VN+T
Sbjct: 63 DVRD-RAALKAAVAAG--VEDFGRLDILVANAGIFPL-TPFAEMDDEQWERVIDVNLTGT 118
Query: 121 LMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNA 180
+LT+ LP L +A IV SS+ G G H Y SKA L
Sbjct: 119 FLLTQAALPALIRAG-----------GGRIVLTSSVAGPRVGYP-GLAH-YAASKAGLVG 165
Query: 181 ATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATA 222
TR+L+++L I ++HPG V T M G+ + A A
Sbjct: 166 FTRALALELAARNITVNSVHPGGVDTPMAGNLGDAQWAEAIA 207
|
Length = 251 |
| >gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Score = 96.8 bits (242), Expect = 3e-24
Identities = 57/209 (27%), Positives = 89/209 (42%), Gaps = 23/209 (11%)
Query: 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIE 59
K+ L+TG +RG+G + L G A + N++ A L A L V+
Sbjct: 5 GKTALVTGASRGIGRAIALRLAADG----AKVVIYDSNEEAAEALAAELRAAGGEARVLV 60
Query: 60 LDVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTA 119
DV+D + L + + L++LVNNAGI L + E VN+T
Sbjct: 61 FDVSDEA-AVRALIEAAVEA--FGALDILVNNAGITR-DALLPRMSEEDWDRVIDVNLTG 116
Query: 120 PLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALN 179
+ + LP + KA IVN+SS+ G G Y +KA +
Sbjct: 117 TFNVVRAALPPMIKAR-----------YGRIVNISSVSGVT---GNPGQTNYSAAKAGVI 162
Query: 180 AATRSLSIDLKGDKIIATAMHPGWVKTDM 208
T++L+++L I A+ PG++ TDM
Sbjct: 163 GFTKALALELASRGITVNAVAPGFIDTDM 191
|
Length = 246 |
| >gnl|CDD|187665 cd09805, type2_17beta_HSD-like_SDR_c, human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 97.3 bits (243), Expect = 3e-24
Identities = 68/219 (31%), Positives = 105/219 (47%), Gaps = 36/219 (16%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDK--AVELLALAQQHSNLHVIE 59
K++LITGC+ G G + K L LG + A C K+ A EL + L ++
Sbjct: 1 KAVLITGCDSGFGNLLAKKLDSLG----FTVLAGCLTKNGPGAKELRRVCS--DRLRTLQ 54
Query: 60 LDVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMT--DHFL--- 114
LDVT +Q + + + V ++GL LVNNAGI LG E++ D +
Sbjct: 55 LDVTK-PEQIKRAAQWVKEHVGEKGLWGLVNNAGI------LGFGGDEELLPMDDYRKCM 107
Query: 115 -VNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRC 173
VN+ + +TK LPLL++A + +VNVSS+ G + G Y
Sbjct: 108 EVNLFGTVEVTKAFLPLLRRA------------KGRVVNVSSMGGRVPFPAGGA---YCA 152
Query: 174 SKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN 212
SKAA+ A + SL +L+ + + + PG KT + G++
Sbjct: 153 SKAAVEAFSDSLRRELQPWGVKVSIIEPGNFKTGITGNS 191
|
17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical-SDR subgroup includes the human proteins: type 2 17beta-HSD, type 6 17beta-HSD, type 2 11beta-HSD, dehydrogenase/reductase SDR family member 9, short-chain dehydrogenase/reductase family 9C member 7, 3-hydroxybutyrate dehydrogenase type 1, and retinol dehydrogenase 5. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 281 |
| >gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Score = 96.2 bits (240), Expect = 8e-24
Identities = 51/211 (24%), Positives = 88/211 (41%), Gaps = 26/211 (12%)
Query: 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSN-LHVI 58
K+ LITG + G+G + K L G ++ R +DK L L + + VI
Sbjct: 6 GKTALITGASSGIGAELAKQLARRG----YNLILVARREDKLEALAKELEDKTGVEVEVI 61
Query: 59 ELDVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVT 118
D++D + + + ++VLVNNAG F L ++ + +N+
Sbjct: 62 PADLSDPEALERLEDELKERGGP---IDVLVNNAGFGT-FGPFLELSLDEEEEMIQLNIL 117
Query: 119 APLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHP-YRCSKAA 177
A LTK +LP + + I+N+ S G + Y +KA
Sbjct: 118 ALTRLTKAVLPGMVE-----------RGAGHIINIGSAAG----LIPTPYMAVYSATKAF 162
Query: 178 LNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
+ + + +L +LKG + TA+ PG +T+
Sbjct: 163 VLSFSEALREELKGTGVKVTAVCPGPTRTEF 193
|
Length = 265 |
| >gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7 | Back alignment and domain information |
|---|
Score = 93.6 bits (233), Expect = 3e-23
Identities = 64/251 (25%), Positives = 106/251 (42%), Gaps = 35/251 (13%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K++L+TG NRG+G ++ L+ G ++A R+ A L+A + + LD
Sbjct: 4 KTVLVTGANRGIGKAFVESLLAHG---AKKVYAAVRDPGSAAHLVAKYG--DKVVPLRLD 58
Query: 62 VTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTD---HFLVNVT 118
VTD K + KD ++V++NNAG+ LL+ + VNV
Sbjct: 59 VTDPES-----IKAAAAQAKD--VDVVINNAGV---LKPATLLEEGALEALKQEMDVNVF 108
Query: 119 APLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAAL 178
L L + P+LK + AIVN++S+ G Y SK+A
Sbjct: 109 GLLRLAQAFAPVLKA-----------NGGGAIVNLNSVASLKNFPAMGT---YSASKSAA 154
Query: 179 NAATRSLSIDLKGDKIIATAMHPGWVKTDMG-GSNAPLEVGAATAGIIQFIQSLGEAHNG 237
+ T+ L +L + ++HPG + T M G+ P E A + +++L
Sbjct: 155 YSLTQGLRAELAAQGTLVLSVHPGPIDTRMAAGAGGPKESPETVAEAV--LKALKAGEFH 212
Query: 238 GFFEYTGKAIK 248
F + K +K
Sbjct: 213 VFPDEMAKQVK 223
|
These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235 |
| >gnl|CDD|180744 PRK06914, PRK06914, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 91.2 bits (227), Expect = 6e-22
Identities = 65/213 (30%), Positives = 97/213 (45%), Gaps = 34/213 (15%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHS---NLHVI 58
K ++TG + G GL L G + AT RN +K LL+ A Q + N+ V
Sbjct: 4 KIAIVTGASSGFGLLTTLELAKKG----YLVIATMRNPEKQENLLSQATQLNLQQNIKVQ 59
Query: 59 ELDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIA-AKFTRLGLLKPEQMTDHFLVN 116
+LDVTD + + V+K+ G +++LVNNAG A F + E+ F N
Sbjct: 60 QLDVTDQNS-----IHNFQLVLKEIGRIDLLVNNAGYANGGFVEEIPV--EEYRKQFETN 112
Query: 117 VTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQG--GFHPYRCS 174
V + +T+ +LP ++K I+N+SSI G + G G PY S
Sbjct: 113 VFGAISVTQAVLPYMRK-----------QKSGKIINISSISGRV-----GFPGLSPYVSS 156
Query: 175 KAALNAATRSLSIDLKGDKIIATAMHPGWVKTD 207
K AL + SL ++LK I + PG T+
Sbjct: 157 KYALEGFSESLRLELKPFGIDVALIEPGSYNTN 189
|
Length = 280 |
| >gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 90.0 bits (224), Expect = 1e-21
Identities = 63/217 (29%), Positives = 96/217 (44%), Gaps = 42/217 (19%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSN---LHVI 58
K +L+TG + G+G + + L G A + RN +K L ALA + +
Sbjct: 6 KRVLLTGASGGIGQALAEALAAAG----ARLLLVGRNAEK---LEALAARLPYPGRHRWV 58
Query: 59 ELDVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVT 118
D+T + ++ VL + + G+NVL+NNAG+ F L PE + +N+T
Sbjct: 59 VADLTSEAGREAVL----ARAREMGGINVLINNAGVNH-FALLEDQDPEAIERLLALNLT 113
Query: 119 APLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQG--GFHPYRCSKA 176
AP+ LT+ +LPLL+ A +VNV S GSI G G+ Y SK
Sbjct: 114 APMQLTRALLPLLRAQ-----------PSAMVVNVGSTFGSI-----GYPGYASYCASKF 157
Query: 177 ALNAATRSLSIDLKGDKI---------IATAMHPGWV 204
AL + +L +L + TAM+ V
Sbjct: 158 ALRGFSEALRRELADTGVRVLYLAPRATRTAMNSEAV 194
|
Length = 263 |
| >gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR | Back alignment and domain information |
|---|
Score = 89.3 bits (222), Expect = 1e-21
Identities = 57/209 (27%), Positives = 92/209 (44%), Gaps = 29/209 (13%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K L+TG +RG+G+ + + L + RN + L A ++ + D
Sbjct: 1 KVALVTGASRGIGIEIARALA----RDGYRVSLGLRNPEDLAALSASGG---DVEAVPYD 53
Query: 62 VTDFSKQQDVLFKDISDVVKD--QGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTA 119
D + + D ++D ++VLV+NAGI T L ++ HF +NV A
Sbjct: 54 ARDPEDARAL-----VDALRDRFGRIDVLVHNAGIGRP-TTLREGSDAELEAHFSINVIA 107
Query: 120 PLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALN 179
P LT+ +LP L++A GS R +V ++S+ G G Y SK AL
Sbjct: 108 PAELTRALLPALREA---------GSGR--VVFLNSLSGKRVLAGNAG---YSASKFALR 153
Query: 180 AATRSLSIDLKGDKIIATAMHPGWVKTDM 208
A +L + + +A+ PG+V T M
Sbjct: 154 ALAHALRQEGWDHGVRVSAVCPGFVDTPM 182
|
This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223 |
| >gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional | Back alignment and domain information |
|---|
Score = 89.0 bits (221), Expect = 3e-21
Identities = 62/213 (29%), Positives = 102/213 (47%), Gaps = 35/213 (16%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELL-ALAQQHSNLHVIEL 60
++ LITG ++G+GL + + +GLG A + R+ D + LA++ V L
Sbjct: 10 QTALITGASKGIGLAIAREFLGLG----ADVLIVARDADALAQARDELAEEFPEREVHGL 65
Query: 61 DVTDFSKQQDVLFKDISDVVKDQ--GLNVLVNNAGI-----AAKFTRLGLLKPEQMTDHF 113
D S +D + I D V+D GL++LVNNAG A +T ++ F
Sbjct: 66 -AADVSDDEDR--RAILDWVEDHWDGLHILVNNAGGNIRKAAIDYT------EDEWRGIF 116
Query: 114 LVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRC 173
N+ + L++ PLLK+ + +AIVN+ S+ G + G PY
Sbjct: 117 ETNLFSAFELSRYAHPLLKQ-----------HASSAIVNIGSVSG-LTHVRSGA--PYGM 162
Query: 174 SKAALNAATRSLSIDLKGDKIIATAMHPGWVKT 206
+KAAL TR+L+++ D I A+ P +++T
Sbjct: 163 TKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRT 195
|
Length = 257 |
| >gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 87.7 bits (218), Expect = 6e-21
Identities = 54/207 (26%), Positives = 102/207 (49%), Gaps = 22/207 (10%)
Query: 4 ILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVT 63
I++TG +RG+G + + L+ G+ + A R+++ EL + + ++ D++
Sbjct: 2 IILTGASRGIGRALAEELLKRGSPSVVVLLA--RSEEPLQELKEELRPGLRVTTVKADLS 59
Query: 64 DFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLM 122
D + + +L + K G ++L+NNAG +++ + +++ +F +N+T+P+
Sbjct: 60 DAAGVEQLL----EAIRKLDGERDLLINNAGSLGPVSKIEFIDLDELQKYFDLNLTSPVC 115
Query: 123 LTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNAAT 182
LT T+L KK G + +VNVSS N G+ Y SKAA +
Sbjct: 116 LTSTLLRAFKK---------RGLKK-TVVNVSSGAAV---NPFKGWGLYCSSKAARDMFF 162
Query: 183 RSLSIDLKGDKIIATAMHPGWVKTDMG 209
R L+ + ++++ A PG V TDM
Sbjct: 163 RVLAAEEPDVRVLSYA--PGVVDTDMQ 187
|
Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241 |
| >gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 87.6 bits (218), Expect = 6e-21
Identities = 58/226 (25%), Positives = 94/226 (41%), Gaps = 37/226 (16%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K +L+TG NRG+G ++ L+ G A ++A R+ + ++ + ++LD
Sbjct: 7 KVVLVTGANRGIGRAFVEQLLARG---AAKVYAAARDPE------SVTDLGPRVVPLQLD 57
Query: 62 VTDFSKQQDV--LFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTA 119
VTD V + SDV +LVNNAGI + L + + N
Sbjct: 58 VTD---PASVAAAAEAASDV------TILVNNAGIFRTGSLLLEGDEDALRAEMETNYFG 108
Query: 120 PLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALN 179
PL + + P+L + AIVNV S++ + Y SKAA
Sbjct: 109 PLAMARAFAPVLAA-----------NGGGAIVNVLSVLSWV---NFPNLGTYSASKAAAW 154
Query: 180 AATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGII 225
+ T++L +L +HPG + TDM A L+ A+ +
Sbjct: 155 SLTQALRAELAPQGTRVLGVHPGPIDTDM---AAGLDAPKASPADV 197
|
Length = 238 |
| >gnl|CDD|180753 PRK06924, PRK06924, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 87.8 bits (218), Expect = 7e-21
Identities = 58/215 (26%), Positives = 108/215 (50%), Gaps = 29/215 (13%)
Query: 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQ-HSNLHVIE 59
M+ ++ITG ++GLG + L+ G H+ + R ++K EL LA+Q +SNL
Sbjct: 1 MRYVIITGTSQGLGEAIANQLLEKG----THVISISRTENK--ELTKLAEQYNSNLTFHS 54
Query: 60 LDVTDFSKQQDVLFKDISDVVKDQGLN--VLVNNAGIAAKFTRLGLLKPEQMTDHFLVNV 117
LD+ D + + F +I +++ ++ L+NNAG+ A + + E++ + +N+
Sbjct: 55 LDLQDVH-ELETNFNEILSSIQEDNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNL 113
Query: 118 TAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAA 177
AP++LT T +K + R ++N+SS N G+ Y SKA
Sbjct: 114 LAPMILTST---FMKHTKDWK-----VDKR--VINISSGAAK---NPYFGWSAYCSSKAG 160
Query: 178 LNAATRSLSIDLK----GDKIIATAMHPGWVKTDM 208
L+ T++++ + + KI+A + PG + T+M
Sbjct: 161 LDMFTQTVATEQEEEEYPVKIVAFS--PGVMDTNM 193
|
Length = 251 |
| >gnl|CDD|181609 PRK09009, PRK09009, C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Score = 87.4 bits (217), Expect = 8e-21
Identities = 75/263 (28%), Positives = 113/263 (42%), Gaps = 45/263 (17%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
+ILI G + G+G M+K L L A + AT R+ QH N+ LD
Sbjct: 1 MNILIVGGSGGIGKAMVKQL--LERYPDATVHATYRHHKPD-------FQHDNVQWHALD 51
Query: 62 VTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTR-----LGLLKPEQMTDHFLVN 116
VTD + ++ K +S+ L+ L+N G+ + L L + + +N
Sbjct: 52 VTD---EAEI--KQLSEQFTQ--LDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLN 104
Query: 117 VTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKA 176
L+L K P LK+ S A +S+ +GSI DN GG++ YR SKA
Sbjct: 105 TLPSLLLAKHFTPKLKQ-----------SESAKFAVISAKVGSISDNRLGGWYSYRASKA 153
Query: 177 ALNAATRSLSID----LKGDKIIATAMHPGWVKTDMGG---SNAP---LEVGAATAG-II 225
ALN ++LSI+ LK + A+HPG T + N P L A ++
Sbjct: 154 ALNMFLKTLSIEWQRSLK--HGVVLALHPGTTDTALSKPFQQNVPKGKLFTPEYVAQCLL 211
Query: 226 QFIQSLGEAHNGGFFEYTGKAIK 248
I + A +G F Y G+ +
Sbjct: 212 GIIANATPAQSGSFLAYDGETLP 234
|
Length = 235 |
| >gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 87.5 bits (217), Expect = 9e-21
Identities = 58/212 (27%), Positives = 89/212 (41%), Gaps = 34/212 (16%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIEL- 60
K+ L+TG +G+G +++ L GLG A ++ RN+ K ++ + V
Sbjct: 7 KTALVTGGTKGIGYAIVEELAGLG----AEVYTCARNQ-KELDECLTEWREKGFKVEGSV 61
Query: 61 -DVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGI-----AAKFTRLGLLKPEQMTDHFL 114
DV+ ++ L ++ LN+LVNNAG A +T E +
Sbjct: 62 CDVSS-RSERQELMDTVASHF-GGKLNILVNNAGTNIRKEAKDYT------EEDYSLIMS 113
Query: 115 VNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCS 174
N A L++ PLLK S IV +SS+ G I + PY +
Sbjct: 114 TNFEAAYHLSRLAHPLLKA-----------SGNGNIVFISSVAGVIAVPSGA---PYGAT 159
Query: 175 KAALNAATRSLSIDLKGDKIIATAMHPGWVKT 206
K ALN TRSL+ + D I A+ P + T
Sbjct: 160 KGALNQLTRSLACEWAKDNIRVNAVAPWVIAT 191
|
This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251 |
| >gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5 | Back alignment and domain information |
|---|
Score = 84.6 bits (210), Expect = 1e-19
Identities = 53/211 (25%), Positives = 90/211 (42%), Gaps = 29/211 (13%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL-LALAQQHSN-LHVIE 59
K++LITG + G+G + G + T R ++ EL L + + ++
Sbjct: 1 KTVLITGASSGIGEATARRFAKAGAK----LILTGRRAERLQELADELGAKFPVKVLPLQ 56
Query: 60 LDVTDFS---KQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVN 116
LDV+D + L ++ D+ ++LVNNAG+A E N
Sbjct: 57 LDVSDRESIEAALENLPEEFRDI------DILVNNAGLALGLDPAQEADLEDWETMIDTN 110
Query: 117 VTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKA 176
V L +T+ +LP++ ++ I+N+ SI G G + Y +KA
Sbjct: 111 VKGLLNVTRLILPIMIAR-----------NQGHIINLGSIAGR---YPYAGGNVYCATKA 156
Query: 177 ALNAATRSLSIDLKGDKIIATAMHPGWVKTD 207
A+ + +L DL G I T + PG V+T+
Sbjct: 157 AVRQFSLNLRKDLIGTGIRVTNIEPGLVETE 187
|
These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249 |
| >gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11 | Back alignment and domain information |
|---|
Score = 83.2 bits (206), Expect = 3e-19
Identities = 60/240 (25%), Positives = 101/240 (42%), Gaps = 36/240 (15%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDK----AVELLALAQQHSNLHV 57
K +ITG + G+G G + LG A + T R+ ++ L + +
Sbjct: 4 KVAIITGSSSGIGAGTAILFARLG----ARLALTGRDAERLEETRQSCLQAGVSEKKILL 59
Query: 58 IELDVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAK--FTRLGLLKPEQMTDHFLV 115
+ D+T+ Q ++ ++ + L++LVNNAGI AK + E+ +
Sbjct: 60 VVADLTEEEGQDRIISTTLAKFGR---LDILVNNAGILAKGGGEDQDI---EEYDKVMNL 113
Query: 116 NVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSK 175
N+ A + LTK +P L K ++ IVNVSS+ G + G Y SK
Sbjct: 114 NLRAVIYLTKLAVPHLIK------------TKGEIVNVSSVAGG---RSFPGVLYYCISK 158
Query: 176 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQSLGEAH 235
AAL+ TR +++L + ++ PG + T +G I+F+ E H
Sbjct: 159 AALDQFTRCTALELAPKGVRVNSVSPGVIVTGFHRR-----MGMPEEQYIKFLSRAKETH 213
|
SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253 |
| >gnl|CDD|181298 PRK08219, PRK08219, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 80.4 bits (199), Expect = 2e-18
Identities = 56/209 (26%), Positives = 85/209 (40%), Gaps = 34/209 (16%)
Query: 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAH-IFATCRNKDKAVELLALAQQHSNLHVIE 59
+ LITG +RG+G + + L P H + R + L LA +
Sbjct: 3 RPTALITGASRGIGAAIAREL------APTHTLLLGGRPAE---RLDELAAELPGATPFP 53
Query: 60 LDVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTA 119
+D+TD V + L+VLV+NAG+A + ++ VNV A
Sbjct: 54 VDLTDPEAIAAA-------VEQLGRLDVLVHNAGVADL-GPVAESTVDEWRATLEVNVVA 105
Query: 120 PLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALN 179
P LT+ +LP L+ A +V ++S G G+ Y SK AL
Sbjct: 106 PAELTRLLLPALRAA------------HGHVVFINSGAGL---RANPGWGSYAASKFALR 150
Query: 180 AATRSLSIDLKGDKIIATAMHPGWVKTDM 208
A +L + G + T++HPG TDM
Sbjct: 151 ALADALREEEPG-NVRVTSVHPGRTDTDM 178
|
Length = 227 |
| >gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 80.3 bits (199), Expect = 3e-18
Identities = 62/212 (29%), Positives = 98/212 (46%), Gaps = 31/212 (14%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELL-ALAQQHSNLHVIEL 60
K L+TG +RG+G + L G A + T R+++ A E + + N +E
Sbjct: 1 KVALVTGASRGIGRAIALRLAAEG----AKVAVTDRSEEAAAETVEEIKALGGNAAALEA 56
Query: 61 DVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLL---KPEQMTDHFLVN 116
DV+D + + + V + G +++LVNNAGI TR LL E VN
Sbjct: 57 DVSDREAVEAL----VEKVEAEFGPVDILVNNAGI----TRDNLLMRMSEEDWDAVINVN 108
Query: 117 VTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKA 176
+T +T+ ++ + K S R I+N+SS++G I G Y SKA
Sbjct: 109 LTGVFNVTQAVIRAMIKR---------RSGR--IINISSVVGLI---GNPGQANYAASKA 154
Query: 177 ALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
+ T+SL+ +L I A+ PG++ TDM
Sbjct: 155 GVIGFTKSLAKELASRGITVNAVAPGFIDTDM 186
|
This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240 |
| >gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 79.7 bits (197), Expect = 6e-18
Identities = 53/217 (24%), Positives = 91/217 (41%), Gaps = 41/217 (18%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHS-NLHVIEL 60
K L+TG +RG+G G+ L G A+I RN++KA E L ++
Sbjct: 6 KVALVTGASRGIGFGIASGLAEAG----ANIVINSRNEEKAEEAQQLIEKEGVEATAFTC 61
Query: 61 DVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGI-----AAKFTRLGLLKPEQMTDHFL 114
DV+D + + + +D G +++LVNNAGI A +F PE +
Sbjct: 62 DVSDEEAIKAA----VEAIEEDFGKIDILVNNAGIIRRHPAEEF-------PEAEWRDVI 110
Query: 115 -VNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGG--FHPY 171
VN+ +++ + + K I+N+ S++ + GG Y
Sbjct: 111 DVNLNGVFFVSQAVARHMIK-----------QGHGKIINICSLL-----SELGGPPVPAY 154
Query: 172 RCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
SK + T++L+ + I A+ PG+ T+M
Sbjct: 155 AASKGGVAGLTKALATEWARHGIQVNAIAPGYFATEM 191
|
Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248 |
| >gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 79.1 bits (196), Expect = 9e-18
Identities = 53/213 (24%), Positives = 93/213 (43%), Gaps = 30/213 (14%)
Query: 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA--LAQQHSNLHVI 58
+ L+TG RGLG + L G A + R+ ++A E L + +
Sbjct: 6 GRVALVTGAARGLGRAIALRLARAG----ADVVVHYRSDEEAAEELVEAVEALGRRAQAV 61
Query: 59 ELDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIA--AKFTRLGLLKPEQMTDHFLV 115
+ DVTD + + + + V+ G +++LVNNAGI + + +++ D V
Sbjct: 62 QADVTDKAALEAAV----AAAVERFGRIDILVNNAGIFEDKPLADMSDDEWDEVID---V 114
Query: 116 NVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSK 175
N++ L + ++P ++K R IVN+SS+ G + Y +K
Sbjct: 115 NLSGVFHLLRAVVPPMRKQ---------RGGR--IVNISSVAGLPGWPGRS---NYAAAK 160
Query: 176 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
A L T++L+ +L I + PG + TDM
Sbjct: 161 AGLVGLTKALARELAEYGITVNMVAPGDIDTDM 193
|
Length = 249 |
| >gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 78.7 bits (195), Expect = 2e-17
Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 25/209 (11%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K ++TG + G+G G+ + G A + T RN++ A + A + D
Sbjct: 6 KVAIVTGASSGIGEGIARRFAAEG----ARVVVTDRNEEAAERVAAEILAGGRAIAVAAD 61
Query: 62 VTDFSKQQDVLFKDISDVVKDQ--GLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTA 119
V+D + + + ++ +++LVNNAG + L + + F VNV +
Sbjct: 62 VSDEADVEAAV-----AAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKS 116
Query: 120 PLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALN 179
P + T+ +P A G AIVNV+S + + G Y SK A+
Sbjct: 117 PYLWTQAAVP-----------AMRGEGGGAIVNVAST-AGLR--PRPGLGWYNASKGAVI 162
Query: 180 AATRSLSIDLKGDKIIATAMHPGWVKTDM 208
T++L+ +L DKI A+ P V+T +
Sbjct: 163 TLTKALAAELGPDKIRVNAVAPVVVETGL 191
|
Length = 251 |
| >gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Score = 78.0 bits (193), Expect = 2e-17
Identities = 58/210 (27%), Positives = 96/210 (45%), Gaps = 32/210 (15%)
Query: 5 LITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA--LAQQHSNLHVIELDV 62
L+TG +RG+G + L G A + T R+ ++ E + L + DV
Sbjct: 2 LVTGASRGIGRAIALKLAKEG----AKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDV 57
Query: 63 TDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLL---KPEQMTDHFLVNVT 118
+D + V + ++ ++ G +++LVNNAGI TR LL K E N+T
Sbjct: 58 SDREDVKAV----VEEIEEELGPIDILVNNAGI----TRDNLLMRMKEEDWDAVIDTNLT 109
Query: 119 APLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAAL 178
LT+ +L ++ K I+N+SS++G + + Q Y SKA +
Sbjct: 110 GVFNLTQAVLRIMIKQR-----------SGRIINISSVVGLMGNAGQAN---YAASKAGV 155
Query: 179 NAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
T+SL+ +L I A+ PG++ TDM
Sbjct: 156 IGFTKSLAKELASRNITVNAVAPGFIDTDM 185
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239 |
| >gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Score = 77.9 bits (193), Expect = 3e-17
Identities = 60/215 (27%), Positives = 98/215 (45%), Gaps = 36/215 (16%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIEL 60
K L+TG +RG+G + + L G N + ++ A L+A + ++
Sbjct: 6 KVALVTGASRGIGRAIAERLAAQGANV---VINYASSEAGAEALVAEIGALGGKALAVQG 62
Query: 61 DVTDFSKQQDVLFKDISDVVKDQ--GLNVLVNNAGIAAKFTRLGLLKPEQMTDHFL---- 114
DV+D + + D K + G+++LVNNAGI TR LL +M +
Sbjct: 63 DVSDAESVERAV-----DEAKAEFGGVDILVNNAGI----TRDNLL--MRMKEEDWDRVI 111
Query: 115 -VNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRC 173
N+T LTK + + K S R I+N+SS++G + + Q Y
Sbjct: 112 DTNLTGVFNLTKAVARPMMKQ---------RSGR--IINISSVVGLMGNPGQA---NYAA 157
Query: 174 SKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
SKA + T+SL+ +L I A+ PG+++TDM
Sbjct: 158 SKAGVIGFTKSLARELASRGITVNAVAPGFIETDM 192
|
Length = 248 |
| >gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 78.1 bits (193), Expect = 3e-17
Identities = 62/209 (29%), Positives = 85/209 (40%), Gaps = 25/209 (11%)
Query: 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL-LALAQQHSNLHVIE 59
K ++ITG + G+G + L G A + RN+ + L LA V+
Sbjct: 1 GKVVIITGASEGIGRALAVRLARAG----AQLVLAARNETRLASLAQELADHGGEALVVP 56
Query: 60 LDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVT 118
DV+D + + I V G +++LVNNAGI L VN
Sbjct: 57 TDVSDAEACERL----IEAAVARFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYL 112
Query: 119 APLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAAL 178
+ T LP LK SR IV VSS+ G T+ G Y SK AL
Sbjct: 113 GAVYCTHAALPHLKA------------SRGQIVVVSSLAGLTGVPTRSG---YAASKHAL 157
Query: 179 NAATRSLSIDLKGDKIIATAMHPGWVKTD 207
+ SL I+L D + T + PG+V TD
Sbjct: 158 HGFFDSLRIELADDGVAVTVVCPGFVATD 186
|
Length = 263 |
| >gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2 | Back alignment and domain information |
|---|
Score = 77.0 bits (190), Expect = 4e-17
Identities = 61/221 (27%), Positives = 93/221 (42%), Gaps = 45/221 (20%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
++LITG G+GL + + + GN + T R +++ L ++ N+H I LD
Sbjct: 6 NTVLITGGTSGIGLALARKFLEAGNT----VIITGRREER---LAEAKKELPNIHTIVLD 58
Query: 62 VTDFSKQQDVLFKDISDVVKD-QGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFL----VN 116
V D + V ++ + L++L+NNAGI + L P D N
Sbjct: 59 VGD---AESVE-ALAEALLSEYPNLDILINNAGIQ---RPIDLRDPASDLDKADTEIDTN 111
Query: 117 VTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHP------ 170
+ P+ L K LP LKK E A IVNVSS + F P
Sbjct: 112 LIGPIRLIKAFLPHLKKQPE-----------ATIVNVSSGL---------AFVPMAANPV 151
Query: 171 YRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS 211
Y +KAAL++ T +L LK + + P V T++
Sbjct: 152 YCATKAALHSYTLALRHQLKDTGVEVVEIVPPAVDTELHEE 192
|
Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228 |
| >gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6 | Back alignment and domain information |
|---|
Score = 76.2 bits (188), Expect = 1e-16
Identities = 59/245 (24%), Positives = 101/245 (41%), Gaps = 34/245 (13%)
Query: 4 ILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIELDV 62
+LITG + G+G + + ++ R D+ EL A L + ++ V LDV
Sbjct: 1 VLITGASSGIGRALAREFA----KAGYNVALAARRTDRLDELKAELLNPNPSVEVEILDV 56
Query: 63 TDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLM 122
TD + Q V ++ + GL++++ NAG+ K T LG L + + N+
Sbjct: 57 TDEERNQLV-IAELEAEL--GGLDLVIINAGVG-KGTSLGDLSFKAFRETIDTNLLGAAA 112
Query: 123 LTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNAAT 182
+ + LP + R +V +SS+ G Y SKAAL++
Sbjct: 113 ILEAALPQFRA-----------KGRGHLVLISSVAALRGL---PGAAAYSASKAALSSLA 158
Query: 183 RSLSIDLKGDKIIATAMHPGWVKTDMGGSNAP----LEVGAATAGIIQFIQSLGEAHNGG 238
SL D+K I T ++PG++ T + + + V A + + +A G
Sbjct: 159 ESLRYDVKKRGIRVTVINPGFIDTPLTANMFTMPFLMSVEQAA-------KRIYKAIKKG 211
Query: 239 FFEYT 243
E T
Sbjct: 212 AAEPT 216
|
These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239 |
| >gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 76.5 bits (189), Expect = 2e-16
Identities = 64/218 (29%), Positives = 94/218 (43%), Gaps = 40/218 (18%)
Query: 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIEL 60
MK+ LITG + G G + + + G+ + T R++ + AL + L
Sbjct: 4 MKTWLITGVSSGFGRALAQAALAAGHR----VVGTVRSEAARADFEALHPDRA--LARLL 57
Query: 61 DVTDFSKQQDVLFKDISDVVKDQ-----GLNVLVNNAGIAAKFTRLGLLK---PEQMTDH 112
DVTDF I VV D ++VLVNNAG G ++ +M
Sbjct: 58 DVTDFDA--------IDAVVADAEATFGPIDVLVNNAGYG----HEGAIEESPLAEMRRQ 105
Query: 113 FLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYR 172
F VNV + +TK +LP ++ R IVN++S+ G I T G Y
Sbjct: 106 FEVNVFGAVAMTKAVLPGMRA-----------RRRGHIVNITSMGGLI---TMPGIGYYC 151
Query: 173 CSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGG 210
SK AL + SL+ ++ I TA+ PG +TD G
Sbjct: 152 GSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAG 189
|
Length = 277 |
| >gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 75.5 bits (186), Expect = 2e-16
Identities = 61/216 (28%), Positives = 94/216 (43%), Gaps = 31/216 (14%)
Query: 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDV 62
+ILITG G+GL + K + LGN + RN+++ E A +H DV
Sbjct: 7 TILITGGASGIGLALAKRFLELGNT----VIICGRNEERLAEAKAENP---EIHTEVCDV 59
Query: 63 TDFSKQQDVLFKDISDVVKDQ-GLNVLVNNAGIAAK--FTRLGLLKPEQMTDHFLVNVTA 119
D +++++ + K+ LNVL+NNAGI T L + N+ A
Sbjct: 60 ADRDSRRELVEW----LKKEYPNLNVLINNAGIQRNEDLTGAEDL-LDDAEQEIATNLLA 114
Query: 120 PLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHP-YRCSKAAL 178
P+ LT +LP L + E A I+NVSS + + P Y +KAA+
Sbjct: 115 PIRLTALLLPHLLRQPE-----------ATIINVSSGLAFVPM----ASTPVYCATKAAI 159
Query: 179 NAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAP 214
++ T +L LK + + P V T G + A
Sbjct: 160 HSYTLALREQLKDTSVEVIELAPPLVDTTEGNTQAR 195
|
Length = 245 |
| >gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 74.9 bits (185), Expect = 4e-16
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 28/215 (13%)
Query: 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIF-ATCRNKDKAVELLA-LAQQHSNLHVI 58
K ++TG + G+G + ++L G A + A N++ A ELL + ++ + +
Sbjct: 5 GKVAIVTGASGGIGRAIAELLAKEG----AKVVIAYDINEEAAQELLEEIKEEGGDAIAV 60
Query: 59 ELDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNV 117
+ DV S ++DV + +V+ G +++LVNNAGI+ F + + E+ VN+
Sbjct: 61 KADV---SSEEDV-ENLVEQIVEKFGKIDILVNNAGIS-NFGLVTDMTDEEWDRVIDVNL 115
Query: 118 TAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI-EDNTQGGFHPYRCSKA 176
T ++LT+ LP + K IVN+SSI G I Y SK
Sbjct: 116 TGVMLLTRYALPYMIKRKSGV-----------IVNISSIWGLIGASCEV----LYSASKG 160
Query: 177 ALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS 211
A+NA T++L+ +L I A+ PG + T+M S
Sbjct: 161 AVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSS 195
|
Length = 247 |
| >gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 73.8 bits (182), Expect = 7e-16
Identities = 57/211 (27%), Positives = 87/211 (41%), Gaps = 30/211 (14%)
Query: 4 ILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSN-LHVIELDV 62
+LITG G+G + G + N+ A E ++ +H + DV
Sbjct: 2 VLITGGGSGIGRLLALEFAKRGAK----VVILDINEKGAEETANNVRKAGGKVHYYKCDV 57
Query: 63 TDFSKQQDV--LFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAP 120
SK+++V K I V D + +L+NNAG+ + L L E++ F VN A
Sbjct: 58 ---SKREEVYEAAKKIKKEVGD--VTILINNAGVVSGKKLLEL-PDEEIEKTFEVNTLAH 111
Query: 121 LMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNA 180
TK LP + L + IV ++S+ G I + G Y SKAA
Sbjct: 112 FWTTKAFLPDM-----------LERNHGHIVTIASVAGLI---SPAGLADYCASKAAAVG 157
Query: 181 ATRSLSIDLKG---DKIIATAMHPGWVKTDM 208
SL ++LK I T + P ++ T M
Sbjct: 158 FHESLRLELKAYGKPGIKTTLVCPYFINTGM 188
|
17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243 |
| >gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 73.5 bits (181), Expect = 1e-15
Identities = 58/219 (26%), Positives = 93/219 (42%), Gaps = 26/219 (11%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K LITG ++G+G + + L+ G + T R++ + E A N+ + D
Sbjct: 7 KVALITGGSKGIGFAIAEALLAEG----YKVAITARDQKELEEAAAELNNKGNVLGLAAD 62
Query: 62 VTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAP 120
V D + Q + + +V G L+VL+ NAG+ F + L PE+ N+T
Sbjct: 63 VRDEADVQ----RAVDAIVAAFGGLDVLIANAGVG-HFAPVEELTPEEWRLVIDTNLTGA 117
Query: 121 LMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNA 180
K +P LK+ I+N+SS+ G+ N G Y SK L
Sbjct: 118 FYTIKAAVPALKR------------GGGYIINISSLAGT---NFFAGGAAYNASKFGLVG 162
Query: 181 ATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGA 219
+ + +DL+ I + + PG V T G + P E A
Sbjct: 163 FSEAAMLDLRQYGIKVSTIMPGSVATHFNG-HTPSEKDA 200
|
Length = 237 |
| >gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 73.3 bits (180), Expect = 2e-15
Identities = 53/204 (25%), Positives = 92/204 (45%), Gaps = 23/204 (11%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K +L+TG +RG+G + + + G A + + R + + + I D
Sbjct: 7 KIVLVTGGSRGIGRMIAQGFLEAG----ARVIISARKAEACADAAEELSAYGECIAIPAD 62
Query: 62 VTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIA--AKFTRLGLLKPEQMTDH-FLVNVT 118
++ + ++ + + L+VLVNNAG A PE D +NV
Sbjct: 63 LSSEEGIEALVARVAE---RSDRLDVLVNNAGATWGAPLEAF----PESGWDKVMDINVK 115
Query: 119 APLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAAL 178
+ LT+ +LPLL+ A+ A + A ++N+ SI G + + + Y SKAA+
Sbjct: 116 SVFFLTQALLPLLRAAATAENP-------ARVINIGSIAGIVVSGLEN--YSYGASKAAV 166
Query: 179 NAATRSLSIDLKGDKIIATAMHPG 202
+ TR L+ +L G+ I A+ PG
Sbjct: 167 HQLTRKLAKELAGEHITVNAIAPG 190
|
Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250 |
| >gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Score = 73.1 bits (180), Expect = 2e-15
Identities = 58/211 (27%), Positives = 90/211 (42%), Gaps = 33/211 (15%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQ--HSNLHVIE 59
K LITG + G+G + L G A + R +++ L ALA + +
Sbjct: 7 KVALITGASSGIGEATARALAEAG----AKVVLAARREER---LEALADEIGAGAALALA 59
Query: 60 LDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIA--AKFTRLGLLKPEQMTDHFLVN 116
LDVTD + + I + ++ G +++LVNNAG+A L ++M D N
Sbjct: 60 LDVTD----RAAVEAAIEALPEEFGRIDILVNNAGLALGDPLDEADLDDWDRMID---TN 112
Query: 117 VTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKA 176
V L T+ +LP + + I+N+ SI G G Y +KA
Sbjct: 113 VKGLLNGTRAVLPGMVERK-----------SGHIINLGSIAGR---YPYPGGAVYGATKA 158
Query: 177 ALNAATRSLSIDLKGDKIIATAMHPGWVKTD 207
A+ A + L +L G I T + PG V+T
Sbjct: 159 AVRAFSLGLRQELAGTGIRVTVISPGLVETT 189
|
Length = 246 |
| >gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 73.0 bits (180), Expect = 2e-15
Identities = 67/233 (28%), Positives = 101/233 (43%), Gaps = 45/233 (19%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNL-----H 56
K ++ITG + G+G + L LG A + + R ++ L + + L H
Sbjct: 4 KVVIITGASSGIGEELAYHLARLG----ARLVLSARREE---RLEEVKSECLELGAPSPH 56
Query: 57 VIELDVTDFSKQQDVLFKDISDVVKDQ-----GLNVLVNNAGI--AAKFTRLGLLKPEQM 109
V+ LD++D D VV++ GL++L+NNAGI + F + ++
Sbjct: 57 VVPLDMSDLE--------DAEQVVEEALKLFGGLDILINNAGISMRSLFHDTSIDVDRKI 108
Query: 110 TDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFH 169
+ VN P+ LTK LP L + S+ GS IV VSSI G I
Sbjct: 109 ME---VNYFGPVALTKAALPHLIERSQ-------GS----IVVVSSIAGKI---GVPFRT 151
Query: 170 PYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATA 222
Y SK AL SL +L I T + PG + T++ NA G+ +A
Sbjct: 152 AYAASKHALQGFFDSLRAELSEPNISVTVVCPGLIDTNI-AMNALSGDGSMSA 203
|
Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257 |
| >gnl|CDD|168186 PRK05693, PRK05693, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 71.4 bits (175), Expect = 1e-14
Identities = 63/216 (29%), Positives = 100/216 (46%), Gaps = 35/216 (16%)
Query: 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIEL 60
M +LITGC+ G+G + L ++AT R KA ++ ALA ++L
Sbjct: 1 MPVVLITGCSSGIG----RALADAFKAAGYEVWATAR---KAEDVEALAAAGFT--AVQL 51
Query: 61 DVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLL---KPEQMTDHFLVNV 117
DV D L +++ + GL+VL+NNAG A +G L E M F NV
Sbjct: 52 DVND-GAALARLAEEL--EAEHGGLDVLINNAGYGA----MGPLLDGGVEAMRRQFETNV 104
Query: 118 TAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAA 177
A + +T+ + PLL++ SR +VN+ S+ G + G Y SKAA
Sbjct: 105 FAVVGVTRALFPLLRR------------SRGLVVNIGSVSGVLVTPFAG---AYCASKAA 149
Query: 178 LNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA 213
++A + +L ++L + + PG + + SNA
Sbjct: 150 VHALSDALRLELAPFGVQVMEVQPGAIASQF-ASNA 184
|
Length = 274 |
| >gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 71.2 bits (175), Expect = 1e-14
Identities = 53/207 (25%), Positives = 83/207 (40%), Gaps = 21/207 (10%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
+L+TG G+G + + G H+ A+ A + + D
Sbjct: 12 LRVLVTGGASGIGRAIAEAFAEAGAR--VHVCDVSE---AALAATAARLPGAKVTATVAD 66
Query: 62 VTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPL 121
V D + Q + +F + + GL+VLVNNAGIA + + PEQ VN+
Sbjct: 67 VADPA-QVERVFDTAVE--RFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQF 123
Query: 122 MLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNAA 181
+ +PLLK I+ +SS+ G + G PY SK A+
Sbjct: 124 YFARAAVPLLKA----------SGHGGVIIALSSVAGRL---GYPGRTPYAASKWAVVGL 170
Query: 182 TRSLSIDLKGDKIIATAMHPGWVKTDM 208
+SL+I+L I A+ PG V+
Sbjct: 171 VKSLAIELGPLGIRVNAILPGIVRGPR 197
|
Length = 264 |
| >gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 70.6 bits (173), Expect = 2e-14
Identities = 51/211 (24%), Positives = 90/211 (42%), Gaps = 28/211 (13%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K L+TG +G+G +K L G A + A R + +L +L ++ + + +D
Sbjct: 8 KRALVTGAGKGIGRATVKALAKAG----ARVVAVSRTQA---DLDSLVRECPGIEPVCVD 60
Query: 62 VTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPL 121
++D+ + +++LVNNA +A + E F VNV A +
Sbjct: 61 LSDW---DATEEA----LGSVGPVDLLVNNAAVA-ILQPFLEVTKEAFDRSFDVNVRAVI 112
Query: 122 MLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNAA 181
+++ + + P +IVNVSS Y +KAAL+
Sbjct: 113 HVSQIVARGMI-----ARGVP-----GSIVNVSSQASQR---ALTNHTVYCSTKAALDML 159
Query: 182 TRSLSIDLKGDKIIATAMHPGWVKTDMGGSN 212
T+ ++++L KI +++P V TDMG N
Sbjct: 160 TKVMALELGPHKIRVNSVNPTVVMTDMGRDN 190
|
Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244 |
| >gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 70.6 bits (173), Expect = 2e-14
Identities = 64/212 (30%), Positives = 97/212 (45%), Gaps = 35/212 (16%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K LITG RG+G + + + G A ++ +++A EL + + I+ D
Sbjct: 8 KVALITGGTRGIGRAIAEAFLREGAK-VAVLYN--SAENEAKEL-----REKGVFTIKCD 59
Query: 62 VTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGI--AAKFTRLGLLKPEQMTDHFLVNVT 118
V + +D + K V K+ G ++VLVNNAGI F K +M +N+
Sbjct: 60 VGN----RDQVKKSKEVVEKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIK---INLN 112
Query: 119 APLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSI--MGSIEDNTQGGFHPYRCSKA 176
+ T LPLLK S AIVN++S +G+ + T F Y +KA
Sbjct: 113 GAIYTTYEFLPLLKL-----------SKNGAIVNIASNAGIGTAAEGTT--F--YAITKA 157
Query: 177 ALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
+ TR L+ +L I A+ PGWV+TDM
Sbjct: 158 GIIILTRRLAFELGKYGIRVNAVAPGWVETDM 189
|
Length = 255 |
| >gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 69.8 bits (171), Expect = 2e-14
Identities = 47/216 (21%), Positives = 75/216 (34%), Gaps = 25/216 (11%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K + ITG GLG L G A + R + L + L + +D
Sbjct: 8 KVVAITGGFGGLGRATAAWLAARG----ARVALIGRGAAPLSQTLPGVPADA-LRIGGID 62
Query: 62 VTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAP 120
+ D + + +V + G L+ LVN AG + + + + VNV
Sbjct: 63 LVD----PQAARRAVDEVNRQFGRLDALVNIAGAFV-WGTIADGDADTWDRMYGVNVKTT 117
Query: 121 LMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNA 180
L +K LP L S IVN+ + G Y +KA +
Sbjct: 118 LNASKAALPAL-----------TASGGGRIVNIGAGAALK---AGPGMGAYAAAKAGVAR 163
Query: 181 ATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLE 216
T +L+ +L I A+ P + T ++ P
Sbjct: 164 LTEALAAELLDRGITVNAVLPSIIDTPPNRADMPDA 199
|
Length = 239 |
| >gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 69.2 bits (170), Expect = 4e-14
Identities = 56/215 (26%), Positives = 90/215 (41%), Gaps = 43/215 (20%)
Query: 6 ITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD--VT 63
+TG G+G + L G N + R ++K L A+A++ + +E
Sbjct: 6 VTGATDGIGKAYAEELAKRGFN----VILISRTQEK---LDAVAKEIEEKYGVETKTIAA 58
Query: 64 DFSKQQDVLFKDISDVVKDQGLNVLVNNAGIA----AKFTRLGLLKPEQMTDHFLVNVTA 119
DFS D+ ++ I ++ + +LVNN GI+ F +++ D VNV A
Sbjct: 59 DFSAGDDI-YERIEKELEGLDIGILVNNVGISHSIPEYFLET---PEDELQDIINVNVMA 114
Query: 120 PLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHP------YRC 173
L +T+ +LP + K + AIVN+SS G P Y
Sbjct: 115 TLKMTRLILPGMVK-----------RKKGAIVNISSF---------AGLIPTPLLATYSA 154
Query: 174 SKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
SKA L+ +R+L + K I ++ P V T M
Sbjct: 155 SKAFLDFFSRALYEEYKSQGIDVQSLLPYLVATKM 189
|
This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239 |
| >gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase | Back alignment and domain information |
|---|
Score = 66.4 bits (163), Expect = 1e-13
Identities = 51/191 (26%), Positives = 73/191 (38%), Gaps = 36/191 (18%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRN--KDKAVELLA-LAQQHSNLHVI 58
++LITG GLGL + + L G H+ R A EL+A L + + V
Sbjct: 1 GTVLITGGTGGLGLALARWLAAEG---ARHLVLVSRRGPAPGAAELVAELEALGAEVTVA 57
Query: 59 ELDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNV 117
DV D +D L ++ + G L+ +V+NAG+ L L PE+ V
Sbjct: 58 ACDVAD----RDALAALLAALPAALGPLDGVVHNAGV-LDDGPLEELTPERFERVLAPKV 112
Query: 118 TAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSI---MGSIEDNTQGGFHPYRCS 174
T L + L LG A V SS+ +GS G Y +
Sbjct: 113 TGAWNLHELTRDL-----------DLG----AFVLFSSVAGVLGS------PGQANYAAA 151
Query: 175 KAALNAATRSL 185
AAL+A
Sbjct: 152 NAALDALAEHR 162
|
This family contains a wide variety of dehydrogenases. Length = 167 |
| >gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Score = 67.9 bits (166), Expect = 1e-13
Identities = 53/214 (24%), Positives = 95/214 (44%), Gaps = 32/214 (14%)
Query: 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCR-NKDKAVELLALAQ-QHSNLHVI 58
K L+TG RG+G + + L+ G + AT D A + + +
Sbjct: 2 KKIALVTGAKRGIGSAIARELLNDGY----RVIATYFSGNDCAKDWFEEYGFTEDQVRLK 57
Query: 59 ELDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLK---PEQMTDHFL 114
ELDVTD + + L +++ +++G +++LVNNAGI TR + K ++ D
Sbjct: 58 ELDVTDTEECAEAL----AEIEEEEGPVDILVNNAGI----TRDSVFKRMSHQEWNDVIN 109
Query: 115 VNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCS 174
N+ + +T+ + + + G R I+N+SS+ G Q G Y +
Sbjct: 110 TNLNSVFNVTQPLFAAMCEQ---------GYGR--IINISSVNGL---KGQFGQTNYSAA 155
Query: 175 KAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
KA + T++L+ + I + PG++ T M
Sbjct: 156 KAGMIGFTKALASEGARYGITVNCIAPGYIATPM 189
|
Length = 245 |
| >gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 67.4 bits (165), Expect = 2e-13
Identities = 59/214 (27%), Positives = 92/214 (42%), Gaps = 36/214 (16%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKD---KAVELLALAQQHSNLHVI 58
K ++TG RGLGL ++LV G A + + + A L A
Sbjct: 6 KVAIVTGGARGLGLAHARLLVAEG----AKVVLSDILDEEGQAAAAELGDAA-----RFF 56
Query: 59 ELDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAA-KFTRLGLLKPEQMTDHFLVN 116
LDVTD V + + G L+VLVNNAGI L E+ +N
Sbjct: 57 HLDVTDEDGWTAV----VDTAREAFGRLDVLVNNAGILTGGTVETTTL--EEWRRLLDIN 110
Query: 117 VTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKA 176
+T + T+ ++P +K+A +I+N+SSI G + D Y SK
Sbjct: 111 LTGVFLGTRAVIPPMKEA-----------GGGSIINMSSIEGLVGD---PALAAYNASKG 156
Query: 177 ALNAATRSLSIDL--KGDKIIATAMHPGWVKTDM 208
A+ T+S +++ +G I ++HPG++ T M
Sbjct: 157 AVRGLTKSAALECATQGYGIRVNSVHPGYIYTPM 190
|
This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247 |
| >gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 67.3 bits (165), Expect = 2e-13
Identities = 56/208 (26%), Positives = 86/208 (41%), Gaps = 35/208 (16%)
Query: 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIEL 60
K++LITG G+GL + + G A ++ V+ N H ++L
Sbjct: 5 TKTVLITGAASGIGLAQARAFLAQG----AQVYG--------VDKQDKPDLSGNFHFLQL 52
Query: 61 DVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAP 120
D++D + LF + V ++L N AGI + L E+ F N+T+
Sbjct: 53 DLSD---DLEPLFDWVPSV------DILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTST 103
Query: 121 LMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNA 180
+LT+ LP + L I+N+ SI + GG Y SK AL
Sbjct: 104 FLLTRAYLPQM-----------LERKSGIIINMCSIASFV---AGGGGAAYTASKHALAG 149
Query: 181 ATRSLSIDLKGDKIIATAMHPGWVKTDM 208
T+ L++D D I + PG VKT M
Sbjct: 150 FTKQLALDYAKDGIQVFGIAPGAVKTPM 177
|
Length = 235 |
| >gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 66.9 bits (164), Expect = 3e-13
Identities = 59/222 (26%), Positives = 79/222 (35%), Gaps = 50/222 (22%)
Query: 1 MKSILITGCNRGLGLGMIKV------LVGLGNNQPAHIFATCRNKDKAVELLALAQQHSN 54
MKSI ITG G+G + VG + N+ + LA N
Sbjct: 1 MKSIFITGAASGIGRATALLFAAEGWRVGAYD----------INEA-GLAALAAELGAGN 49
Query: 55 LHVIELDVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMT--DH 112
LDVTD + L D + L+VL NNAGI R G E + H
Sbjct: 50 AWTGALDVTDRAAWDAAL-ADFAAA-TGGRLDVLFNNAGIL----RGGPF--EDIPLEAH 101
Query: 113 FL---VNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSS---IMGSIEDNTQG 166
+NV L LP LK A ++N SS I G Q
Sbjct: 102 DRVIDINVKGVLNGAHAALPYLKATPGA-----------RVINTSSASAIYG------QP 144
Query: 167 GFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
G Y +K A+ T +L ++ + I + P +V T M
Sbjct: 145 GLAVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAM 186
|
Length = 260 |
| >gnl|CDD|181198 PRK08017, PRK08017, oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 66.6 bits (163), Expect = 4e-13
Identities = 60/207 (28%), Positives = 89/207 (42%), Gaps = 30/207 (14%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
KS+LITGC+ G+GL L + + A CR D + +L I LD
Sbjct: 3 KSVLITGCSSGIGLEAALEL----KRRGYRVLAACRKPDDVARMNSLG-----FTGILLD 53
Query: 62 VTDFSKQQDVLFKDISDVVK--DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTA 119
+ D + + + +V+ D L L NNAG + L + +QM F N
Sbjct: 54 LDD----PESVERAADEVIALTDNRLYGLFNNAGFGV-YGPLSTISRQQMEQQFSTNFFG 108
Query: 120 PLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALN 179
LT +LP + P G R IV SS+MG I +G Y SK AL
Sbjct: 109 THQLTMLLLPAML---------PHGEGR--IVMTSSVMGLISTPGRGA---YAASKYALE 154
Query: 180 AATRSLSIDLKGDKIIATAMHPGWVKT 206
A + +L ++L+ I + + PG ++T
Sbjct: 155 AWSDALRMELRHSGIKVSLIEPGPIRT 181
|
Length = 256 |
| >gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 65.9 bits (161), Expect = 7e-13
Identities = 57/209 (27%), Positives = 87/209 (41%), Gaps = 20/209 (9%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLAL-AQQHSNLHVIEL 60
+ +LITG + GLG + L G + R + +A + A +
Sbjct: 7 RRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAF 66
Query: 61 DVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTA 119
DV DF+ + L V++ G L++LVNNAGIA L E+ D VN+
Sbjct: 67 DVRDFAATRAAL----DAGVEEFGRLDILVNNAGIATDAA-FAELSIEEWDDVIDVNLDG 121
Query: 120 PLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALN 179
+T+ LP + +A IVN++S+ G G Y SKA L
Sbjct: 122 FFNVTQAALPPMIRARRGGR----------IVNIASVAGVR---GNRGQVNYAASKAGLI 168
Query: 180 AATRSLSIDLKGDKIIATAMHPGWVKTDM 208
T++L+ +L I A+ PG + T M
Sbjct: 169 GLTKTLANELAPRGITVNAVAPGAINTPM 197
|
Length = 249 |
| >gnl|CDD|187666 cd09806, type1_17beta-HSD-like_SDR_c, human estrogenic 17beta-hydroxysteroid dehydrogenase type 1 (type 1 17beta-HSD)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 65.9 bits (161), Expect = 7e-13
Identities = 60/215 (27%), Positives = 92/215 (42%), Gaps = 39/215 (18%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQH--SNLHVIE 59
+LITGC+ G+GL + V + ++ ++AT R+ K L A L ++
Sbjct: 1 TVVLITGCSSGIGLH-LAVRLASDPSKRFKVYATMRDLKKKGRLWEAAGALAGGTLETLQ 59
Query: 60 LDVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKP------EQMTDHF 113
LDV D + V ++ ++VLV NAG +GLL P + M F
Sbjct: 60 LDVCD-----SKSVAAAVERVTERHVDVLVCNAG-------VGLLGPLEALSEDAMASVF 107
Query: 114 LVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQG-GFHP-Y 171
VNV + + + LP +K+ GS R I+ SS+ G QG F+ Y
Sbjct: 108 DVNVFGTVRMLQAFLPDMKRR---------GSGR--ILVTSSVGG-----LQGLPFNDVY 151
Query: 172 RCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKT 206
SK AL SL++ L + + + G V T
Sbjct: 152 CASKFALEGLCESLAVQLLPFNVHLSLIECGPVHT 186
|
17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical SDR subgroup includes human type 1 17beta-HSD, human retinol dehydrogenase 8, zebrafish photoreceptor associated retinol dehydrogenase type 2, and a chicken ovary-specific 17beta-hydroxysteroid dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258 |
| >gnl|CDD|181324 PRK08251, PRK08251, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 65.7 bits (161), Expect = 9e-13
Identities = 65/237 (27%), Positives = 95/237 (40%), Gaps = 50/237 (21%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATC-RNKDKAVELLA-LAQQHSNLHVI- 58
+ ILITG + GLG GM + G + A C R D+ EL A L ++ + V
Sbjct: 3 QKILITGASSGLGAGMAREFAAKGRD-----LALCARRTDRLEELKAELLARYPGIKVAV 57
Query: 59 -ELDVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNV 117
LDV D + +V F + D + GL+ ++ NAGI K RLG T F N
Sbjct: 58 AALDVNDHDQVFEV-FAEFRDELG--GLDRVIVNAGIG-KGARLG-------TGKFWAN- 105
Query: 118 TAPLMLTKTMLPLLKKASEANSAAPLGSSRAA-----------IVNVSSIMGSIEDNTQG 166
K +E N A L AA +V +SS+ S G
Sbjct: 106 --------------KATAETNFVAALAQCEAAMEIFREQGSGHLVLISSV--SAVRGLPG 149
Query: 167 GFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM--GGSNAPLEVGAAT 221
Y SKA + + L +L I + + PG+++++M + P V T
Sbjct: 150 VKAAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKAKSTPFMVDTET 206
|
Length = 248 |
| >gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 64.6 bits (158), Expect = 2e-12
Identities = 63/216 (29%), Positives = 87/216 (40%), Gaps = 36/216 (16%)
Query: 5 LITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVI--ELDV 62
L+TG RG+GLG+ + L G + + R D+ + + + VI DV
Sbjct: 6 LVTGGRRGIGLGIARALAAAGFD----LAINDRPDDEELAATQQELRALGVEVIFFPADV 61
Query: 63 TDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLL--KPEQMTDHFLVNVTA 119
D S + +L G ++ LVNNAG+ K R LL PE +N+
Sbjct: 62 ADLSAHEAML----DAAQAAWGRIDCLVNNAGVGVK-VRGDLLDLTPESFDRVLAINLRG 116
Query: 120 PLMLT----KTMLPLLKKASEANSAAPLGSSRAAIVNVSSI---MGSIEDNTQGGFHPYR 172
P LT K ML A P S IV VSS+ M S Y
Sbjct: 117 PFFLTQAVAKRML-----AQPEPEELPHRS----IVFVSSVNAIMVSPNRG------EYC 161
Query: 173 CSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
SKA L+ A + + L + I + PG +KTDM
Sbjct: 162 ISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDM 197
|
Length = 256 |
| >gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 64.2 bits (157), Expect = 3e-12
Identities = 54/235 (22%), Positives = 84/235 (35%), Gaps = 35/235 (14%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHS--NLHVIE 59
K +ITG G+GL K+L+ G A + RN + L + ++
Sbjct: 1 KVAIITGGASGIGLATAKLLLKKG----AKVAILDRN-ENPGAAAELQAINPKVKATFVQ 55
Query: 60 LDVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAA-KFTRLGLLKPEQMTDHFLVNVT 118
DVT + + K I + +++L+NNAGI K P VN+T
Sbjct: 56 CDVTSWEQLAAAFKKAIEKFGR---VDILINNAGILDEKSYLFAGKLPPPWEKTIDVNLT 112
Query: 119 APLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHP------YR 172
+ T L + K G IVN+ S+ G +P Y
Sbjct: 113 GVINTTYLALHYMDKN--------KGGKGGVIVNIGSV---------AGLYPAPQFPVYS 155
Query: 173 CSKAALNAATRSLSIDLKGDK-IIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQ 226
SK + TRSL+ L+ + A+ PG+ T + E + Q
Sbjct: 156 ASKHGVVGFTRSLADLLEYKTGVRVNAICPGFTNTPLLPDLVAKEAEMLPSAPTQ 210
|
This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244 |
| >gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 65.3 bits (159), Expect = 3e-12
Identities = 53/217 (24%), Positives = 92/217 (42%), Gaps = 41/217 (18%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAV----ELLALAQQHSNL-- 55
+ +L+TG G+G FA R D+ V + ++ +L
Sbjct: 6 RVVLVTGAAGGIGRAA------------CQRFA--RAGDQVVVADRNVERARERADSLGP 51
Query: 56 --HVIELDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGL-LKPEQMTD 111
H + +DV+D ++ ++ + ++ G ++VLVNNAG+ L E+
Sbjct: 52 DHHALAMDVSDEAQIREG----FEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFAR 107
Query: 112 HFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPY 171
+N+T ++ + L L+ + AAIVNV+S G + Y
Sbjct: 108 LQAINLTGAYLVAREALRLMIE----------QGHGAAIVNVASGAGLV---ALPKRTAY 154
Query: 172 RCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
SKAA+ + TRSL+ + I A+ PG+V+T M
Sbjct: 155 SASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQM 191
|
Length = 520 |
| >gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 63.9 bits (156), Expect = 4e-12
Identities = 59/215 (27%), Positives = 85/215 (39%), Gaps = 35/215 (16%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLG-------NNQPAHIFATCRNKDKAVELLALAQQHSN 54
K +ITG +G+G + + L G N +T +++ N
Sbjct: 3 KVAIITGAAQGIGRAIAERLAADGFNIVLADLNLEEAAKSTI---------QEISEAGYN 53
Query: 55 LHVIELDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHF 113
+ DVTD +D + I V+ G +V+VNNAGIA T L + E + +
Sbjct: 54 AVAVGADVTD----KDDVEALIDQAVEKFGSFDVMVNNAGIAP-ITPLLTITEEDLKKVY 108
Query: 114 LVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRC 173
VNV L + KK LG I+N SSI G G Y
Sbjct: 109 AVNVFGVLFGIQAAARQFKK---------LGHG-GKIINASSIAGVQGFPNLG---AYSA 155
Query: 174 SKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
SK A+ T++ + +L I A PG VKT+M
Sbjct: 156 SKFAVRGLTQTAAQELAPKGITVNAYAPGIVKTEM 190
|
2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257 |
| >gnl|CDD|212495 cd09807, retinol-DH_like_SDR_c, retinol dehydrogenases (retinol-DHs), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 64.0 bits (156), Expect = 4e-12
Identities = 63/227 (27%), Positives = 102/227 (44%), Gaps = 47/227 (20%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQ-----QHSNLH 56
K+++ITG N G+G + L G A + CR+ K E A A+ + +
Sbjct: 2 KTVIITGANTGIGKETARELARRG----ARVIMACRDMAKCEE--AAAEIRRDTLNHEVI 55
Query: 57 VIELDVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTD----- 111
V LD+ + + +++ +D+ L+VL+NNAG+ + P T+
Sbjct: 56 VRHLDLASLKSIRAFAAEFLAE--EDR-LDVLINNAGV--------MRCPYSKTEDGFEM 104
Query: 112 HFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIED------NTQ 165
F VN +LT +L LLKK S+ + IVNVSS+ N++
Sbjct: 105 QFGVNHLGHFLLTNLLLDLLKK-----------SAPSRIVNVSSLAHKAGKINFDDLNSE 153
Query: 166 GGFH---PYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMG 209
++ Y SK A TR L+ L+G + A+HPG V+T++G
Sbjct: 154 KSYNTGFAYCQSKLANVLFTRELARRLQGTGVTVNALHPGVVRTELG 200
|
Classical SDR-like subgroup containing retinol-DHs and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 274 |
| >gnl|CDD|181668 PRK09135, PRK09135, pteridine reductase; Provisional | Back alignment and domain information |
|---|
Score = 63.4 bits (155), Expect = 4e-12
Identities = 56/194 (28%), Positives = 81/194 (41%), Gaps = 32/194 (16%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA--LAQQHSN-LHVI 58
K LITG R +G + + L G H + LA L +
Sbjct: 7 KVALITGGARRIGAAIARTLHAAGYRVAIH----YHRSAAEADALAAELNALRPGSAAAL 62
Query: 59 ELDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKF--TRLGLLKPEQMTDHFLV 115
+ D+ D D L + ++ V G L+ LVNNA + F T LG + Q D F
Sbjct: 63 QADLLD----PDALPELVAACVAAFGRLDALVNNA---SSFYPTPLGSITEAQWDDLFAS 115
Query: 116 NVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSK 175
N+ AP L++ P L+K R AIVN++ I + G+ Y +K
Sbjct: 116 NLKAPFFLSQAAAPQLRK------------QRGAIVNITDIHA---ERPLKGYPVYCAAK 160
Query: 176 AALNAATRSLSIDL 189
AAL TRSL+++L
Sbjct: 161 AALEMLTRSLALEL 174
|
Length = 249 |
| >gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4 | Back alignment and domain information |
|---|
Score = 63.3 bits (154), Expect = 5e-12
Identities = 53/214 (24%), Positives = 81/214 (37%), Gaps = 26/214 (12%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K+ L+TG +RG+G ++L G + R++ + A AQ+ + + D
Sbjct: 1 KAALVTGASRGIGEATARLLHAEG----YRVGICARDEARLAA--AAAQELEGVLGLAGD 54
Query: 62 VTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKP-EQMTDHFLVNVTAP 120
V D + + D + GL+ LVNNAG+ + L P E A
Sbjct: 55 VRDEADVRR--AVDAMEEAFG-GLDALVNNAGVGV-MKPVEELTPEEWRLVLDTNLTGAF 110
Query: 121 LMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNA 180
+ K LL++ IVNV S+ G N G Y SK L
Sbjct: 111 YCIHKAAPALLRR------------GGGTIVNVGSLAGK---NAFKGGAAYNASKFGLLG 155
Query: 181 ATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAP 214
+ + +DL+ I + PG V T GS
Sbjct: 156 LSEAAMLDLREANIRVVNVMPGSVDTGFAGSPEG 189
|
This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226 |
| >gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 63.5 bits (155), Expect = 5e-12
Identities = 59/210 (28%), Positives = 78/210 (37%), Gaps = 27/210 (12%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIEL 60
K L+TG RGLG + L G A + +A EL A L H I
Sbjct: 8 KRALVTGAARGLGAAFAEALAEAG----ATVAFNDGLAAEARELAAALEAAGGRAHAIAA 63
Query: 61 DVTDFSKQQDVLFKDISDVVKDQ--GLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVT 118
D+ D V + D GL+ LVNNAGI L + VNV
Sbjct: 64 DLAD---PASV--QRFFDAAAAALGGLDGLVNNAGITNS-KSATELDIDTWDAVMNVNVR 117
Query: 119 APLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAAL 178
++ + LP L+ S R IVN++S Y SK A+
Sbjct: 118 GTFLMLRAALPHLRD-----------SGRGRIVNLAS---DTALWGAPKLGAYVASKGAV 163
Query: 179 NAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
TRSL+ +L G I A+ PG T+
Sbjct: 164 IGMTRSLARELGGRGITVNAIAPGLTATEA 193
|
Length = 250 |
| >gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 63.5 bits (155), Expect = 5e-12
Identities = 49/212 (23%), Positives = 90/212 (42%), Gaps = 28/212 (13%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELL-ALAQQH-SNLHVIE 59
K ++TG +RG+GL + + L G A + + +A E LA+++ +
Sbjct: 9 KVAIVTGGSRGIGLAIARALAEAG----ADVAIIYNSAPRAEEKAEELAKKYGVKTKAYK 64
Query: 60 LDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVT 118
DV+ Q+ + K + KD G +++L+ NAGI L EQ VN+
Sbjct: 65 CDVSS----QESVEKTFKQIQKDFGKIDILIANAGITVHKPALDY-TYEQWNKVIDVNLN 119
Query: 119 APLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI--EDNTQGGFHPYRCSKA 176
+ + KK + +++ +S+ G+I Q Y SKA
Sbjct: 120 GVFNCAQAAAKIFKK-----------QGKGSLIITASMSGTIVNRPQPQA---AYNASKA 165
Query: 177 ALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
A+ +SL+++ I ++ PG++ TD+
Sbjct: 166 AVIHLAKSLAVEWAKYFIRVNSISPGYIDTDL 197
|
NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252 |
| >gnl|CDD|181044 PRK07577, PRK07577, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 61.7 bits (150), Expect = 2e-11
Identities = 51/211 (24%), Positives = 92/211 (43%), Gaps = 42/211 (19%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRN--KDKAVELLALAQQHSNLHVIE 59
+++L+TG +G+GL + L LG+ + R+ D EL A
Sbjct: 4 RTVLVTGATKGIGLALSLRLANLGH----QVIGIARSAIDDFPGELFAC----------- 48
Query: 60 LDVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTA 119
D+ D + L + + + ++ +VNN GIA LG + + D + +NV A
Sbjct: 49 -DLADIEQTAATL----AQINEIHPVDAIVNNVGIAL-PQPLGKIDLAALQDVYDLNVRA 102
Query: 120 PLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSS--IMGSIEDNTQGGFHPYRCSKAA 177
+ +T+ L +K R IVN+ S I G+++ Y +K+A
Sbjct: 103 AVQVTQAFLEGMKLR---------EQGR--IVNICSRAIFGALDRT------SYSAAKSA 145
Query: 178 LNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
L TR+ +++L I A+ PG ++T++
Sbjct: 146 LVGCTRTWALELAEYGITVNAVAPGPIETEL 176
|
Length = 234 |
| >gnl|CDD|187654 cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13 ketoreductase (KR), classical (c)-like SDRs | Back alignment and domain information |
|---|
Score = 61.7 bits (150), Expect = 2e-11
Identities = 60/234 (25%), Positives = 98/234 (41%), Gaps = 45/234 (19%)
Query: 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIEL 60
MK I ITG + GLGL + L+ G+ H R++ +A + A V+
Sbjct: 7 MKRIFITGSSDGLGLAAARTLLHQGHEVVLHA----RSQKRAADAKAACPG--AAGVL-- 58
Query: 61 DVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTA 119
+ D S + + ++D V G + +++NAGI + R + VNV A
Sbjct: 59 -IGDLSSLAET--RKLADQVNAIGRFDAVIHNAGILSGPNRKTP--DTGIPAMVAVNVLA 113
Query: 120 PLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIM-----GSIED-----NTQGGFH 169
P +LT + + ++ +SS M S++D +
Sbjct: 114 PYVLTALIRRPKR-----------------LIYLSSGMHRGGNASLDDIDWFNRGENDSP 156
Query: 170 PYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAP--LEVGAAT 221
Y SK L+ T + ++ + + + A+HPGWV T MGG+ AP LE G T
Sbjct: 157 AYSDSK--LHVLTLAAAVARRWKDVSSNAVHPGWVPTKMGGAGAPDDLEQGHLT 208
|
Daunorubicin is a clinically important therapeutic compound used in some cancer treatments. Daunorubicin C-13 ketoreductase is member of the classical SDR family with a canonical glycine-rich NAD(P)-binding motif, but lacking a complete match to the active site tetrad characteristic of this group. The critical Tyr, plus the Lys and upstream Asn are present, but the catalytic Ser is replaced, generally by Gln. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 260 |
| >gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR | Back alignment and domain information |
|---|
Score = 61.7 bits (150), Expect = 2e-11
Identities = 54/209 (25%), Positives = 89/209 (42%), Gaps = 22/209 (10%)
Query: 5 LITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQH-SNLHVIELDVT 63
++TG +RG+G + L G + + + D+A E++A + D+
Sbjct: 5 IVTGASRGIGRAIATELAARGFDIAIN---DLPDDDQATEVVAEVLAAGRRAIYFQADIG 61
Query: 64 DFSKQQDVLFKDISDVVKDQ--GLNVLVNNAGIAAKFTRLGLLK--PEQMTDHFLVNVTA 119
+ S + +L D + L+ LVNNAGIA + R LL + +N+
Sbjct: 62 ELSDHEALL-----DQAWEDFGRLDCLVNNAGIAVR-PRGDLLDLTEDSFDRLIAINLRG 115
Query: 120 PLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALN 179
P LT+ + + G R+ I+ V+SI + +G Y SKA L+
Sbjct: 116 PFFLTQA----VARRMVEQPDRFDGPHRS-IIFVTSINAYLVSPNRG---EYCISKAGLS 167
Query: 180 AATRSLSIDLKGDKIIATAMHPGWVKTDM 208
ATR L+ L + I + PG + TDM
Sbjct: 168 MATRLLAYRLADEGIAVHEIRPGLIHTDM 196
|
This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255 |
| >gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 61.3 bits (149), Expect = 2e-11
Identities = 52/210 (24%), Positives = 86/210 (40%), Gaps = 35/210 (16%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K LIT +G+G + G A++ AT N+ E L ++ + LD
Sbjct: 3 KVALITAAAQGIGRAIALAFAREG----ANVIATDINE----EKLKELERGPGITTRVLD 54
Query: 62 VTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLL---KPEQMTDHFLVNVT 118
VTD +Q L K+ + +VL N AG F G + + + +NV
Sbjct: 55 VTDK-EQVAALAKEEGRI------DVLFNCAG----FVHHGSILDCEDDDWDFAMNLNVR 103
Query: 119 APLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAAL 178
+ ++ K +LP + + + I+N+SS+ SI+ Y +KAA+
Sbjct: 104 SMYLMIKAVLPKMLARKDGS-----------IINMSSVASSIK--GVPNRFVYSTTKAAV 150
Query: 179 NAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
T+S++ D I A+ PG V T
Sbjct: 151 IGLTKSVAADFAQQGIRCNAICPGTVDTPS 180
|
Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241 |
| >gnl|CDD|180796 PRK07023, PRK07023, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 60.8 bits (148), Expect = 4e-11
Identities = 57/206 (27%), Positives = 93/206 (45%), Gaps = 26/206 (12%)
Query: 5 LITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTD 64
++TG +RGLG + + L+ G + R++ + LA A L +ELD++D
Sbjct: 5 IVTGHSRGLGAALAEQLLQPGIA----VLGVARSRHPS---LA-AAAGERLAEVELDLSD 56
Query: 65 FSKQQDVLFKDI-SDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLML 123
+ L D+ + V +L+NNAG L L + +NV APLML
Sbjct: 57 AAAAAAWLAGDLLAAFVDGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLML 116
Query: 124 TKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNAATR 183
T + AA + R I+++SS N G+ Y +KAAL+ R
Sbjct: 117 TAALA----------QAASDAAER-RILHISSGAAR---NAYAGWSVYCATKAALDHHAR 162
Query: 184 SLSID-LKGDKIIATAMHPGWVKTDM 208
++++D + +I++ A PG V T M
Sbjct: 163 AVALDANRALRIVSLA--PGVVDTGM 186
|
Length = 243 |
| >gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 60.4 bits (147), Expect = 5e-11
Identities = 60/233 (25%), Positives = 91/233 (39%), Gaps = 40/233 (17%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K L+TG +RG+G + K L G + + +A+ +K A E++A +
Sbjct: 4 KVALVTGASRGIGRAIAKRLARDGASVVVN-YAS--SKAAAEEVVA--------EIEAAG 52
Query: 62 VTDFSKQQDVLFKDISDVVK--------DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHF 113
+ Q DV D S V + G+++LVNNAG+ + E+ F
Sbjct: 53 GKAIAVQADV--SDPSQVARLFDAAEKAFGGVDILVNNAGVM-LKKPIAETSEEEFDRMF 109
Query: 114 LVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRC 173
VN + + AA I+N+SS + + + Y
Sbjct: 110 TVNTKGAFFVLQ-------------EAAKRLRDGGRIINISSSLTAA---YTPNYGAYAG 153
Query: 174 SKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM--GGSNAPLEVGAATAGI 224
SKAA+ A TR L+ +L G I A+ PG V TDM G G A
Sbjct: 154 SKAAVEAFTRVLAKELGGRGITVNAVAPGPVDTDMFYAGKTEEAVEGYAKMSP 206
|
1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243 |
| >gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 60.3 bits (146), Expect = 6e-11
Identities = 58/208 (27%), Positives = 87/208 (41%), Gaps = 22/208 (10%)
Query: 5 LITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSN-LHVIELDVT 63
++TG G+G + L G A + + A + A QQ +E +VT
Sbjct: 3 IVTGGAAGIGKAIAGTLAKAG----ASVVIADLKSEGAEAVAAAIQQAGGQAIGLECNVT 58
Query: 64 DFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLML 123
+ V+ +S + G+ +LVNNAG + E F +N+ + L
Sbjct: 59 SEQDLEAVVKATVS---QFGGITILVNNAGGGGPKPFDMPMTEEDFEWAFKLNLFSAFRL 115
Query: 124 TKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNAATR 183
++ P ++KA AI+N+SS M S N Y SKAA+N TR
Sbjct: 116 SQLCAPHMQKAGGG-----------AILNISS-MSSE--NKNVRIAAYGSSKAAVNHMTR 161
Query: 184 SLSIDLKGDKIIATAMHPGWVKTDMGGS 211
+L+ DL I A+ PG VKTD S
Sbjct: 162 NLAFDLGPKGIRVNAVAPGAVKTDALAS 189
|
This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242 |
| >gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 60.2 bits (146), Expect = 7e-11
Identities = 58/215 (26%), Positives = 95/215 (44%), Gaps = 37/215 (17%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQ-HSNLH---V 57
K+ LITG +G+G G+ +V G A D + E+ LA + H
Sbjct: 7 KTALITGALQGIGEGIARVFARHG--------ANLILLDISPEIEKLADELCGRGHRCTA 58
Query: 58 IELDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLG--LLKPEQMTD-HF 113
+ DV D + I + +G +++LVNNAG+ RLG L ++ D H
Sbjct: 59 VVADVRDPASVAAA----IKRAKEKEGRIDILVNNAGVC----RLGSFLDMSDEDRDFHI 110
Query: 114 LVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRC 173
+N+ +TK +LP + + IV +SS+ G + + G Y
Sbjct: 111 DINIKGVWNVTKAVLPEM-----------IARKDGRIVMMSSVTGDMVADP--GETAYAL 157
Query: 174 SKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
+KAA+ T+SL+++ I A+ PG+V+T M
Sbjct: 158 TKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPM 192
|
Length = 263 |
| >gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 60.1 bits (146), Expect = 8e-11
Identities = 57/214 (26%), Positives = 81/214 (37%), Gaps = 43/214 (20%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
KS+L+TG + G+G L G A + A RN A L LA + + + LD
Sbjct: 10 KSVLVTGASSGIGRACAVALAQRG----ARVVAAARN---AAALDRLAGE-TGCEPLRLD 61
Query: 62 VTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKP--EQMTDHF----LV 115
V D + + L + LVN AGIA L+ + + F V
Sbjct: 62 VGDDAAIRAAL-------AAAGAFDGLVNCAGIA-------SLESALDMTAEGFDRVMAV 107
Query: 116 NVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFH-PYRCS 174
N ++ A A +IVNVSS + H Y S
Sbjct: 108 NARGAALV----------ARHVARAMIAAGRGGSIVNVSSQAALVGLP----DHLAYCAS 153
Query: 175 KAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
KAAL+A TR L ++L I +++P T M
Sbjct: 154 KAALDAITRVLCVELGPHGIRVNSVNPTVTLTPM 187
|
Length = 245 |
| >gnl|CDD|180822 PRK07069, PRK07069, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 60.1 bits (146), Expect = 8e-11
Identities = 55/212 (25%), Positives = 99/212 (46%), Gaps = 32/212 (15%)
Query: 5 LITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLH------VI 58
ITG GLG + + + G A +F T N ++ A A + + H
Sbjct: 3 FITGAAGGLGRAIARRMAEQG----AKVFLTDINDAAGLD--AFAAEINAAHGEGVAFAA 56
Query: 59 ELDVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVT 118
DVTD ++ Q +L + + GL+VLVNNAG+ + F + ++ ++ +NV
Sbjct: 57 VQDVTDEAQWQALLAQAADAM---GGLSVLVNNAGVGS-FGAIEQIELDEWRRVMAINVE 112
Query: 119 APLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAAL 178
+ + K LP L+ S A+IVN+SS+ + + Y SKAA+
Sbjct: 113 SIFLGCKHALPYLRA-----------SQPASIVNISSVAAFKAEPD---YTAYNASKAAV 158
Query: 179 NAATRSLSIDL--KGDKIIATAMHPGWVKTDM 208
+ T+S+++D +G + ++HP +++T +
Sbjct: 159 ASLTKSIALDCARRGLDVRCNSIHPTFIRTGI 190
|
Length = 251 |
| >gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 60.0 bits (146), Expect = 8e-11
Identities = 54/210 (25%), Positives = 84/210 (40%), Gaps = 42/210 (20%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQH-SNLHVIEL 60
K ++TG +G + + LV G A + + D A+A I
Sbjct: 7 KVAIVTGGATLIGAAVARALVAAG----ARVAIVDIDADNGA---AVAASLGERARFIAT 59
Query: 61 DVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNA------GIAAKFTRLGLLKPEQMTDHF 113
D+TD + + ++ VV G +++LVN A G+A+ +R
Sbjct: 60 DITD----DAAIERAVATVVARFGRVDILVNLACTYLDDGLAS--SR------ADWLAAL 107
Query: 114 LVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRC 173
VN+ + ML + P L + AIVN +SI Q G Y
Sbjct: 108 DVNLVSAAMLAQAAHPHLARGG------------GAIVNFTSISAKF---AQTGRWLYPA 152
Query: 174 SKAALNAATRSLSIDLKGDKIIATAMHPGW 203
SKAA+ TRS+++DL D I ++ PGW
Sbjct: 153 SKAAIRQLTRSMAMDLAPDGIRVNSVSPGW 182
|
Length = 261 |
| >gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 60.1 bits (146), Expect = 8e-11
Identities = 54/214 (25%), Positives = 88/214 (41%), Gaps = 30/214 (14%)
Query: 5 LITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNK---DKAVELLALAQQHSNLHVIELD 61
L+TG RGLG + + L G G AH+ RN + AV AL + D
Sbjct: 15 LVTGSARGLGFEIARALAGAG----AHVLVNGRNAATLEAAVA--ALRAAGGAAEALAFD 68
Query: 62 VTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPL 121
+ D + F I L++LVNN G A L L + ++ AP+
Sbjct: 69 IAD-EEAVAAAFARIDAE--HGRLDILVNNVG-ARDRRPLAELDDAAIRALLETDLVAPI 124
Query: 122 MLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNAA 181
+L++ +K+ G R I+ ++SI G + + G Y +K L
Sbjct: 125 LLSRLAAQRMKRQ---------GYGR--IIAITSIAGQV---ARAGDAVYPAAKQGLTGL 170
Query: 182 TRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPL 215
R+L+ + I + A+ PG+ T+ +NA +
Sbjct: 171 MRALAAEFGPHGITSNAIAPGYFATE---TNAAM 201
|
Length = 256 |
| >gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Score = 59.7 bits (145), Expect = 1e-10
Identities = 47/208 (22%), Positives = 84/208 (40%), Gaps = 25/208 (12%)
Query: 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIEL 60
K+ L+TG G+GL + + L G A++ ++ A +A +
Sbjct: 1 GKTALVTGAASGIGLAIARALAAAG----ANVVVNDFGEEGAEAAAKVAGDAG--GSVIY 54
Query: 61 DVTDFSKQQDVLFKDISDVVKDQ--GLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVT 118
D +K+ ++ D+ + GL++LVNNAGI + PE V +T
Sbjct: 55 LPADVTKEDEI--ADMIAAAAAEFGGLDILVNNAGI-QHVAPIEEFPPEDWDRIIAVMLT 111
Query: 119 APLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAAL 178
+ + LP +KK I+N++S G + Y +K L
Sbjct: 112 SAFHTIRAALPHMKKQ-----------GWGRIINIASAHGLV---ASPFKSAYVAAKHGL 157
Query: 179 NAATRSLSIDLKGDKIIATAMHPGWVKT 206
T+ L++++ I A+ PG+V+T
Sbjct: 158 IGLTKVLALEVAEHGITVNAICPGYVRT 185
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255 |
| >gnl|CDD|181334 PRK08263, PRK08263, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 58.9 bits (143), Expect = 3e-10
Identities = 57/215 (26%), Positives = 93/215 (43%), Gaps = 28/215 (13%)
Query: 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQH-SNLHVIE 59
K ITG +RG G + + G+ + AT R+ L LA+++ L +
Sbjct: 3 EKVWFITGASRGFGRAWTEAALERGDR----VVATARDTAT---LADLAEKYGDRLLPLA 55
Query: 60 LDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVT 118
LDVTD + +F + V+ G L+++VNNAG F + + + N
Sbjct: 56 LDVTD----RAAVFAAVETAVEHFGRLDIVVNNAGYG-LFGMIEEVTESEARAQIDTNFF 110
Query: 119 APLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAAL 178
L +T+ +LP L++ S I+ +SSI G G +H SK AL
Sbjct: 111 GALWVTQAVLPYLREQ---------RSGH--IIQISSIGGISAFPMSGIYH---ASKWAL 156
Query: 179 NAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA 213
+ +L+ ++ I T + PG TD G++A
Sbjct: 157 EGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSA 191
|
Length = 275 |
| >gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 58.1 bits (141), Expect = 3e-10
Identities = 45/192 (23%), Positives = 74/192 (38%), Gaps = 28/192 (14%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHV---- 57
L+TG + +G + + L G + E L + + L
Sbjct: 1 AVALVTGAAKRIGRAIAEALAAEGYR----VVVHYNRS--EAEAQRLKDELNALRNSAVL 54
Query: 58 IELDVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNV 117
++ D++DF+ D++ +VLVNNA T LG + + F +N+
Sbjct: 55 VQADLSDFAACADLVAAAFRAF---GRCDVLVNNASAFYP-TPLGQGSEDAWAELFGINL 110
Query: 118 TAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAA 177
AP +L + L GS +I+N+ M D G+ Y SKAA
Sbjct: 111 KAPYLLIQAFARRLA-----------GSRNGSIINIIDAM---TDRPLTGYFAYCMSKAA 156
Query: 178 LNAATRSLSIDL 189
L TRS +++L
Sbjct: 157 LEGLTRSAALEL 168
|
Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234 |
| >gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 58.3 bits (141), Expect = 3e-10
Identities = 54/235 (22%), Positives = 101/235 (42%), Gaps = 35/235 (14%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K ++TG ++G+G ++ L G+N F V+ ++D
Sbjct: 7 KVAIVTGGSQGIGKAVVNRLKEEGSNVIN--FDIKEPSYNDVDY------------FKVD 52
Query: 62 VTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAP 120
V++ ++ + K I V+ G +++LVNNAGI + + ++ ++ VNV
Sbjct: 53 VSN----KEQVIKGIDYVISKYGRIDILVNNAGI-ESYGAIHAVEEDEWDRIINVNVNGI 107
Query: 121 LMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNA 180
+++K +P + L + I+N++S+ Y SK A+
Sbjct: 108 FLMSKYTIPYM-----------LKQDKGVIINIASVQSFA---VTRNAAAYVTSKHAVLG 153
Query: 181 ATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQSLGEAH 235
TRS+++D I A+ PG ++T + A LEVG + + I+ GE H
Sbjct: 154 LTRSIAVDY-APTIRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEMH 207
|
Length = 258 |
| >gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR | Back alignment and domain information |
|---|
Score = 58.2 bits (141), Expect = 4e-10
Identities = 45/206 (21%), Positives = 82/206 (39%), Gaps = 35/206 (16%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K ++TG G G G+ + G A + N D A + A I+ D
Sbjct: 6 KVAIVTGAGSGFGEGIARRFAQEG----ARVVIADINADGAERVAA--DIGEAAIAIQAD 59
Query: 62 VTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPL 121
VT + + ++ +S K L++LVNNAGI + + + E+ F VNV +
Sbjct: 60 VTKRADVEAMVEAALS---KFGRLDILVNNAGITHRNKPMLEVDEEEFDRVFAVNVKSIY 116
Query: 122 MLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHP------YRCSK 175
+ + ++P +++ I+N++S G P Y SK
Sbjct: 117 LSAQALVPHMEEQGG-----------GVIINIAS---------TAGLRPRPGLTWYNASK 156
Query: 176 AALNAATRSLSIDLKGDKIIATAMHP 201
+ AT++++++L I + P
Sbjct: 157 GWVVTATKAMAVELAPRNIRVNCLCP 182
|
This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248 |
| >gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1 | Back alignment and domain information |
|---|
Score = 58.5 bits (142), Expect = 4e-10
Identities = 53/172 (30%), Positives = 79/172 (45%), Gaps = 26/172 (15%)
Query: 39 KDKAVELLALAQQH-SNLHVIELDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAA 96
+D A E L ++ +I D+ D S +D+ + +VVK+ G L++LVNNA
Sbjct: 62 EDDAEETKKLIEEEGRKCLLIPGDLGDESFCRDL----VKEVVKEFGKLDILVNNAAYQH 117
Query: 97 KFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSI 156
+ + EQ+ F N+ + LTK LP LKK GSS I+N +S+
Sbjct: 118 PQESIEDITTEQLEKTFRTNIFSMFYLTKAALPHLKK----------GSS---IINTTSV 164
Query: 157 MGSIEDNTQGGFH--PYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKT 206
+G H Y +K A+ A TR LS+ L I A+ PG + T
Sbjct: 165 TA-----YKGSPHLLDYAATKGAIVAFTRGLSLQLAEKGIRVNAVAPGPIWT 211
|
These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270 |
| >gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 58.0 bits (141), Expect = 5e-10
Identities = 30/121 (24%), Positives = 52/121 (42%), Gaps = 15/121 (12%)
Query: 84 GLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPL 143
++ LVNNA L +NV L LT+ P L +
Sbjct: 82 RVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAE---------- 131
Query: 144 GSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGW 203
S +IV ++S + ++Q + Y+ +K AL AA++SL+ +L I ++ PG+
Sbjct: 132 --SGGSIVMINS---MVLRHSQPKYGAYKMAKGALLAASQSLATELGPQGIRVNSVAPGY 186
Query: 204 V 204
+
Sbjct: 187 I 187
|
Length = 258 |
| >gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR | Back alignment and domain information |
|---|
Score = 57.5 bits (139), Expect = 6e-10
Identities = 48/222 (21%), Positives = 84/222 (37%), Gaps = 29/222 (13%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
+ +L+TG +RGLG + + G + R+ + A + A A I+ D
Sbjct: 1 QVVLVTGASRGLGAAIARSFAREGARV---VVNYYRSTESAEAVAAEAG--ERAIAIQAD 55
Query: 62 VTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMT-----DHFLV 115
V D + Q I + G ++ +VNNA I F + +
Sbjct: 56 VRDRDQVQ----AMIEEAKNHFGPVDTIVNNALIDFPFDPDQRKTFDTIDWEDYQQQLEG 111
Query: 116 NVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSK 175
V L L + +LP K+ ++N+ + ++ N +H Y +K
Sbjct: 112 AVKGALNLLQAVLPDFKERGSGR-----------VINIGT---NLFQNPVVPYHDYTTAK 157
Query: 176 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEV 217
AAL TR+++ +L I + G +K + P EV
Sbjct: 158 AALLGFTRNMAKELGPYGITVNMVSGGLLKVTDASAATPKEV 199
|
This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246 |
| >gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Score = 57.4 bits (139), Expect = 6e-10
Identities = 55/210 (26%), Positives = 92/210 (43%), Gaps = 32/210 (15%)
Query: 5 LITGCNRGLGLGMIKVLVGLGNNQPAHIFATCR-NKDKAVELL-ALAQQHSNLHVIELDV 62
L+TG G+G + + L G + A C N+++A L + V+E DV
Sbjct: 4 LVTGGMGGIGTAICQRLAKDGYR----VAANCGPNEERAEAWLQEQGALGFDFRVVEGDV 59
Query: 63 TDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLK---PEQMTDHFLVNVT 118
+ F + ++ V + G ++VLVNNAGI TR K EQ + N+
Sbjct: 60 SSFESCKAA----VAKVEAELGPIDVLVNNAGI----TRDATFKKMTYEQWSAVIDTNLN 111
Query: 119 APLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAAL 178
+ +T+ P++ E G R I+N+SS+ G Q G Y +KA +
Sbjct: 112 SVFNVTQ---PVIDGMRER------GWGR--IINISSVNGQ---KGQFGQTNYSAAKAGM 157
Query: 179 NAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
T++L+ + + + PG++ TDM
Sbjct: 158 IGFTKALAQEGATKGVTVNTISPGYIATDM 187
|
This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242 |
| >gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 57.4 bits (139), Expect = 7e-10
Identities = 59/216 (27%), Positives = 93/216 (43%), Gaps = 40/216 (18%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIEL 60
K L+TG +RG+G + L G + + R++ A E + ++
Sbjct: 5 KVALVTGSSRGIGKAIALRLAEEGYDIAVNYA---RSRKAAEETAEEIEALGRKALAVKA 61
Query: 61 DVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKP--EQMTDHFL---- 114
+V D K ++ +F I + L+V VNNA G+L+P E H+
Sbjct: 62 NVGDVEKIKE-MFAQIDEEFG--RLDVFVNNAAS-------GVLRPAMELEESHWDWTMN 111
Query: 115 VNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI---EDNTQGGFHPY 171
+N A L + L++K G + I+++SS+ GSI E+ T G
Sbjct: 112 INAKALLFCAQEAAKLMEKV---------GGGK--IISLSSL-GSIRYLENYTTVG---- 155
Query: 172 RCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTD 207
SKAAL A TR L+++L I A+ G V TD
Sbjct: 156 -VSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTD 190
|
Length = 250 |
| >gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR | Back alignment and domain information |
|---|
Score = 57.2 bits (138), Expect = 8e-10
Identities = 58/234 (24%), Positives = 88/234 (37%), Gaps = 29/234 (12%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIEL 60
K L+TG + G+G + L G A + R D+ L L + V+EL
Sbjct: 4 KVALVTGASSGIGEATARALAAEG----AAVAIAARRVDRLEALADELEAEGGKALVLEL 59
Query: 61 DVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTD---HFLVNV 117
DVTD +Q V V L++LVNNAGI LG ++ TD N+
Sbjct: 60 DVTD---EQQVDAAVERTVEALGRLDILVNNAGIML----LGPVEDADTTDWTRMIDTNL 112
Query: 118 TAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAA 177
+ T LP ++ IVN+SS+ G + Y +K
Sbjct: 113 LGLMYTTHAALPHHLLRNKGT-----------IVNISSVAGRVAVRNSAV---YNATKFG 158
Query: 178 LNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQSL 231
+NA + L ++ + + PG V T++ A I I+ L
Sbjct: 159 VNAFSEGLRQEVTERGVRVVVIEPGTVDTELRDHITHTITKEAYEERISTIRKL 212
|
CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243 |
| >gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 56.9 bits (138), Expect = 1e-09
Identities = 55/211 (26%), Positives = 90/211 (42%), Gaps = 29/211 (13%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIEL 60
K L+TG +GLG + + G A + RN +K A L + ++
Sbjct: 7 KVALVTGGTQGLGAAIARAFAERG---AAGLVICGRNAEKGEAQAAELEALGAKAVFVQA 63
Query: 61 DVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTA 119
D++D + V ++ + G L+ LVN AG+ + T L PE HF VNV A
Sbjct: 64 DLSDVEDCRRV----VAAADEAFGRLDALVNAAGLTDRGTILDT-SPELFDRHFAVNVRA 118
Query: 120 PLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGG---FHPYRCSKA 176
P L + + L+++ + IVN+ S+ + GG Y SK
Sbjct: 119 PFFLMQEAIKLMRRRKAEGT----------IVNIGSM------SAHGGQPFLAAYCASKG 162
Query: 177 ALNAATRSLSIDLKGDKIIATAMHPGWVKTD 207
AL TR+ + L ++I ++ GW+ T+
Sbjct: 163 ALATLTRNAAYALLRNRIRVNGLNIGWMATE 193
|
Length = 260 |
| >gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 56.5 bits (137), Expect = 1e-09
Identities = 53/218 (24%), Positives = 85/218 (38%), Gaps = 45/218 (20%)
Query: 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFA--------TCRNKDKAVELLALAQQH 52
M LITG + G+G A FA R++D L ALA +
Sbjct: 6 MPRALITGASSGIGKAT------------ALAFAKAGWDLALVARSQDA---LEALAAEL 50
Query: 53 SNLHV-IELDVTDFSKQQDVLFKDISDVVKDQGL-NVLVNNAGIA--AKFTRLGLLKPEQ 108
+ V D S + + I+++++ G +VL+NNAG+A + L +
Sbjct: 51 RSTGVKAAAYSIDLSNPEAIAPG-IAELLEQFGCPDVLINNAGMAYTGPLLEMPLSDWQW 109
Query: 109 MTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGF 168
+ +N+T+ +LP ++ I+NVSSI N +
Sbjct: 110 VIQ---LNLTSVFQCCSAVLPGMRARG-----------GGLIINVSSIAA---RNAFPQW 152
Query: 169 HPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKT 206
Y SKAAL A T+ L+ + + I + G V T
Sbjct: 153 GAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNT 190
|
Length = 241 |
| >gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR | Back alignment and domain information |
|---|
Score = 56.5 bits (137), Expect = 1e-09
Identities = 55/211 (26%), Positives = 88/211 (41%), Gaps = 35/211 (16%)
Query: 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSN-----L 55
K +LITG + G+G + K LV G A++ R++ K E + + +N +
Sbjct: 1 GKHVLITGGSSGIGKALAKELVKEG----ANVIIVARSESKLEEAVEEIEAEANASGQKV 56
Query: 56 HVIELDVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAG--IAAKFTRLGLLKPEQMTDHF 113
I D++D+ ++ + F V K +++VN AG I F L E+
Sbjct: 57 SYISADLSDY-EEVEQAFAQA--VEKGGPPDLVVNCAGISIPGLFEDL---TAEEFERGM 110
Query: 114 LVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQG--GFHPY 171
VN L + +LPL+K+ + IV VSS + G G+ Y
Sbjct: 111 DVNYFGSLNVAHAVLPLMKEQRPGH-----------IVFVSSQAALV-----GIYGYSAY 154
Query: 172 RCSKAALNAATRSLSIDLKGDKIIATAMHPG 202
SK AL SL +LK I + ++P
Sbjct: 155 CPSKFALRGLAESLRQELKPYNIRVSVVYPP 185
|
These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239 |
| >gnl|CDD|235813 PRK06482, PRK06482, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 56.7 bits (137), Expect = 1e-09
Identities = 59/224 (26%), Positives = 99/224 (44%), Gaps = 29/224 (12%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSN-LHVIEL 60
K+ ITG + G G GM + L+ G+ + AT R D L L ++ + L V++L
Sbjct: 3 KTWFITGASSGFGRGMTERLLARGD----RVAATVRRPDA---LDDLKARYGDRLWVLQL 55
Query: 61 DVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAP 120
DVTD + + V+ + + + + ++V+V+NAG F L Q+ N+
Sbjct: 56 DVTDSAAVRAVVDRAFAALGR---IDVVVSNAGYGL-FGAAEELSDAQIRRQIDTNLIGS 111
Query: 121 LMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNA 180
+ + + LP L++ G R IV VSS G I GF Y +K +
Sbjct: 112 IQVIRAALPHLRRQ---------GGGR--IVQVSSEGGQI---AYPGFSLYHATKWGIEG 157
Query: 181 ATRSLSIDLKGDKIIATAMHPGWVKTDMGGS---NAPLEVGAAT 221
+++ ++ I T + PG +T+ G APL+ T
Sbjct: 158 FVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDT 201
|
Length = 276 |
| >gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 56.1 bits (136), Expect = 2e-09
Identities = 65/239 (27%), Positives = 101/239 (42%), Gaps = 44/239 (18%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHS-NLHVIEL 60
K I+ITG +GLG M + L G A + N++K E +A +
Sbjct: 6 KVIVITGGAQGLGRAMAEYLAQKG----AKLALIDLNQEKLEEAVAECGALGTEVRGYAA 61
Query: 61 DVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLL---KPEQMTDHFL-- 114
+VTD ++DV + + +D G LN L+NNAGI R GLL K ++T
Sbjct: 62 NVTD---EEDV-EATFAQIAEDFGQLNGLINNAGI----LRDGLLVKAKDGKVTSKMSLE 113
Query: 115 -------VNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSI--MGSIEDNTQ 165
VN+T + + EA + S+ I+N+SSI G++
Sbjct: 114 QFQSVIDVNLTGVFLCGR----------EAAAKMIESGSKGVIINISSIARAGNM----- 158
Query: 166 GGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGI 224
G Y SKA + A T + + +L I A+ PG ++T+M + P + I
Sbjct: 159 -GQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAMKPEALERLEKMI 216
|
Length = 253 |
| >gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 56.1 bits (136), Expect = 2e-09
Identities = 54/214 (25%), Positives = 96/214 (44%), Gaps = 35/214 (16%)
Query: 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIEL 60
K L+TG + G+G + L G ++ R DK +L +L +H + L
Sbjct: 3 KKVALVTGASSGIGKATARRLAAQGYT----VYGAARRVDKMEDLASLG-----VHPLSL 53
Query: 61 DVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTD---HFLVN 116
DVTD + + + ++ ++G ++VLVNNAG + G ++ + + F VN
Sbjct: 54 DVTD----EASIKAAVDTIIAEEGRIDVLVNNAG----YGSYGAIEDVPIDEARRQFEVN 105
Query: 117 VTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKA 176
+ LT+ +LP ++ S R I+N+SS+ G I +H +K
Sbjct: 106 LFGAARLTQLVLPHMRAQ---------RSGR--IINISSMGGKIYTPLGAWYH---ATKF 151
Query: 177 ALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGG 210
AL + +L +++ I + PG +KT+ G
Sbjct: 152 ALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWGD 185
|
Length = 273 |
| >gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 55.7 bits (135), Expect = 3e-09
Identities = 63/238 (26%), Positives = 100/238 (42%), Gaps = 44/238 (18%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K + ITG RG+GL + L LG A + ++ A E A + + LD
Sbjct: 6 KVVAITGGARGIGLATARALAALG----ARVAIGDLDEALAKET---AAELGLVVGGPLD 58
Query: 62 VTDFSKQQDVLFKDISDVVKDQG--LNVLVNNAGIAAKFTRLG--LLKPEQMTDHFL-VN 116
VTD + F D V+ ++VLVNNAG+ +G L +P+ +T L VN
Sbjct: 59 VTDPAS-----FAAFLDAVEADLGPIDVLVNNAGV----MPVGPFLDEPDAVTRRILDVN 109
Query: 117 VTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKA 176
V ++ +K P + R +VNV+S+ G I G Y SK
Sbjct: 110 VYGVILGSKLAAP-----------RMVPRGRGHVVNVASLAGKI---PVPGMATYCASKH 155
Query: 177 ALNAATRSLSIDLKGDKIIATAMHPGWVKTDM------GGSNAPLE---VGAATAGII 225
A+ T + ++L+G + + + P +V T++ +E V AA G +
Sbjct: 156 AVVGFTDAARLELRGTGVHVSVVLPSFVNTELIAGTGGAKGFKNVEPEDVAAAIVGTV 213
|
Length = 273 |
| >gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR | Back alignment and domain information |
|---|
Score = 55.4 bits (134), Expect = 3e-09
Identities = 45/209 (21%), Positives = 88/209 (42%), Gaps = 25/209 (11%)
Query: 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIEL 60
K L+T + G+GL + + L G A + RN++ +E A + V+ +
Sbjct: 1 GKVALVTAASSGIGLAIARALAREG----ARVAICARNREN-LERAASELRAGGAGVLAV 55
Query: 61 DVTDFSKQQDVLFKDISDVVKDQ--GLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVT 118
V D + +D+ + + D +++LVNNAG L E + F + +
Sbjct: 56 -VADLTDPEDI--DRLVEKAGDAFGRVDILVNNAGGPPPGPFAEL-TDEDWLEAFDLKLL 111
Query: 119 APLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAAL 178
+ + + + +LP +K+ IVN+SS+ E ++A L
Sbjct: 112 SVIRIVRAVLPGMKERGWG-----------RIVNISSLTV-KEPEP--NLVLSNVARAGL 157
Query: 179 NAATRSLSIDLKGDKIIATAMHPGWVKTD 207
++LS +L D + ++ PG++ T+
Sbjct: 158 IGLVKTLSRELAPDGVTVNSVLPGYIDTE 186
|
This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253 |
| >gnl|CDD|181225 PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 54.8 bits (132), Expect = 6e-09
Identities = 60/214 (28%), Positives = 93/214 (43%), Gaps = 35/214 (16%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIF---ATCRNKDKAVELLALAQQHSNLHVI 58
K+ILITG +G+G + L G A I T + AV L Q+ H
Sbjct: 10 KNILITGSAQGIGFLLATGLAEYG----AEIIINDITAERAELAVA--KLRQEGIKAHAA 63
Query: 59 ELDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAK--FTRLGLLKPEQMTDHFL- 114
+VT + + I + KD G ++VL+NNAGI + FT PEQ + +
Sbjct: 64 PFNVTHKQEVEAA----IEHIEKDIGPIDVLINNAGIQRRHPFTEF----PEQEWNDVIA 115
Query: 115 VNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCS 174
VN TA ++ S+A + + I+N+ S+ + +T PY S
Sbjct: 116 VNQTAVFLV-----------SQAVARYMVKRQAGKIINICSMQSELGRDT---ITPYAAS 161
Query: 175 KAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
K A+ TR + ++L I + PG+ KT+M
Sbjct: 162 KGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEM 195
|
Length = 254 |
| >gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12 | Back alignment and domain information |
|---|
Score = 54.0 bits (130), Expect = 1e-08
Identities = 53/222 (23%), Positives = 85/222 (38%), Gaps = 23/222 (10%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K ++TG G+G L G A + + A ++A + + +D
Sbjct: 4 KVAIVTGAGAGIGAACAARLAREG----ARVVVADIDGGAAQAVVAQIAGGAL--ALRVD 57
Query: 62 VTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPL 121
VTD +Q V V + GL++LVNNAG + +N+
Sbjct: 58 VTD---EQQVAALFERAVEEFGGLDLLVNNAGAMHLTPAIIDTDLAVWDQTMAINLRGTF 114
Query: 122 MLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNAA 181
+ + P + + +IVN+SSI G D G Y SKAA+
Sbjct: 115 LCCRHAAPRM-----------IARGGGSIVNLSSIAGQSGDPGYGA---YGASKAAIRNL 160
Query: 182 TRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAG 223
TR+L+ +L+ I A+ PG + T + + GA G
Sbjct: 161 TRTLAAELRHAGIRCNALAPGLIDTPLLLAKLAGFEGALGPG 202
|
These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246 |
| >gnl|CDD|180411 PRK06123, PRK06123, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 53.6 bits (129), Expect = 1e-08
Identities = 59/218 (27%), Positives = 100/218 (45%), Gaps = 31/218 (14%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATC----RNKDKAVELLALAQQHSNLHV 57
K ++ITG +RG+G + G +A C RN+D A ++ ++ +
Sbjct: 3 KVMIITGASRGIGAATALLAAERG-------YAVCLNYLRNRDAAEAVVQAIRRQGGEAL 55
Query: 58 -IELDVTDFSKQQDV--LFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHF 113
+ DV D + DV LF+ + ++ G L+ LVNNAGI RL + ++T F
Sbjct: 56 AVAADVAD---EADVLRLFEAVD---RELGRLDALVNNAGILEAQMRLEQMDAARLTRIF 109
Query: 114 LVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRC 173
NV + + +K+ S + G AIVNVSS+ + + G + Y
Sbjct: 110 ATNVVGSFLCAREA---VKRMSTRH-----GGRGGAIVNVSSMAARL--GSPGEYIDYAA 159
Query: 174 SKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS 211
SK A++ T L+ ++ + I A+ PG + T++ S
Sbjct: 160 SKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHAS 197
|
Length = 248 |
| >gnl|CDD|181131 PRK07814, PRK07814, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 53.6 bits (129), Expect = 2e-08
Identities = 50/203 (24%), Positives = 82/203 (40%), Gaps = 23/203 (11%)
Query: 5 LITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIELDVT 63
++TG RGLG + G A + R + + E+ + HV+ D+
Sbjct: 14 VVTGAGRGLGAAIALAFAEAG----ADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLA 69
Query: 64 DFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLML 123
+ + + + L+++VNN G L + + D F NV L
Sbjct: 70 HPEATAGLAGQAVEAFGR---LDIVVNNVGGTMPNPLLST-STKDLADAFTFNVATAHAL 125
Query: 124 TKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNAATR 183
T +PL+ + S S ++N+SS MG + GF Y +KAAL TR
Sbjct: 126 TVAAVPLMLEHSGGGS----------VINISSTMGRL---AGRGFAAYGTAKAALAHYTR 172
Query: 184 SLSIDLKGDKIIATAMHPGWVKT 206
++DL +I A+ PG + T
Sbjct: 173 LAALDL-CPRIRVNAIAPGSILT 194
|
Length = 263 |
| >gnl|CDD|236357 PRK08945, PRK08945, putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 53.0 bits (128), Expect = 2e-08
Identities = 57/230 (24%), Positives = 98/230 (42%), Gaps = 63/230 (27%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATC--------RNKDKAVELLALAQQ-- 51
+ IL+TG G+G + A +A R ++K L A+ +
Sbjct: 13 RIILVTGAGDGIG------------REAALTYARHGATVILLGRTEEK---LEAVYDEIE 57
Query: 52 ---HSNLHVIELDVTDFSKQQDVLFKDISDVVKDQ--GLNVLVNNAGIAAKFTRLGLLKP 106
+I LD+ + Q ++ ++D +++Q L+ +++NAG+ LG L P
Sbjct: 58 AAGGPQPAIIPLDLLTATPQN---YQQLADTIEEQFGRLDGVLHNAGL------LGELGP 108
Query: 107 --EQMTDHFL----VNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160
+Q + + VNV A MLT+ +LPLL K S A++V SS +G
Sbjct: 109 MEQQDPEVWQDVMQVNVNATFMLTQALLPLLLK-----------SPAASLVFTSSSVG-- 155
Query: 161 EDNTQG--GFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
QG + Y SK A + L+ + +G + ++PG +T M
Sbjct: 156 ---RQGRANWGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAM 202
|
Length = 247 |
| >gnl|CDD|187641 cd08936, CR_SDR_c, Porcine peroxisomal carbonyl reductase like, classical (c) SDR | Back alignment and domain information |
|---|
Score = 52.9 bits (127), Expect = 2e-08
Identities = 62/209 (29%), Positives = 94/209 (44%), Gaps = 28/209 (13%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCR---NKDKAVELLALAQQHSNLHVI 58
K L+T G+GL + + L G AH+ + R N D+AV L Q L V
Sbjct: 11 KVALVTASTDGIGLAIARRLAQDG----AHVVVSSRKQQNVDRAVATL----QGEGLSVT 62
Query: 59 ELDVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFL-VNV 117
V K +D + V G+++LV+NA + F + L E++ D L VNV
Sbjct: 63 G-TVCHVGKAEDRERLVATAVNLHGGVDILVSNAAVNPFFGNI-LDSTEEVWDKILDVNV 120
Query: 118 TAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAA 177
A ++TK ++P ++K G S +V VSS+ + G PY SK A
Sbjct: 121 KATALMTKAVVPEMEKRG--------GGS---VVIVSSVAAF---HPFPGLGPYNVSKTA 166
Query: 178 LNAATRSLSIDLKGDKIIATAMHPGWVKT 206
L T++L+ +L I + PG +KT
Sbjct: 167 LLGLTKNLAPELAPRNIRVNCLAPGLIKT 195
|
This subgroup contains porcine peroxisomal carbonyl reductase and similar proteins. The porcine enzyme efficiently reduces retinals. This subgroup also includes human dehydrogenase/reductase (SDR family) member 4 (DHRS4), and human DHRS4L1. DHRS4 is a peroxisomal enzyme with 3beta-hydroxysteroid dehydrogenase activity; it catalyzes the reduction of 3-keto-C19/C21-steroids into 3beta-hydroxysteroids more efficiently than it does the retinal reduction. The human DHRS4 gene cluster contains DHRS4, DHRS4L2 and DHRS4L1. DHRS4L2 and DHRS4L1 are paralogs of DHRS4, DHRS4L2 being the most recent member. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256 |
| >gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR | Back alignment and domain information |
|---|
Score = 52.9 bits (127), Expect = 2e-08
Identities = 52/208 (25%), Positives = 94/208 (45%), Gaps = 22/208 (10%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K +++TG +RG+G G+++ V G A +A+E + + D
Sbjct: 10 KVVIVTGGSRGIGRGIVRAFVENGAK--VVFCARGEAAGQALESELNRAGPGSCKFVPCD 67
Query: 62 VTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAP 120
VT +++ + IS V+ G ++ LVNNAG ++ D +N+ +
Sbjct: 68 VT----KEEDIKTLISVTVERFGRIDCLVNNAGWHPPHQTTDETSAQEFRDLLNLNLISY 123
Query: 121 LMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNA 180
+ +K LP L+K S+ I+N+SS++GSI Q PY +K A+ A
Sbjct: 124 FLASKYALPHLRK------------SQGNIINLSSLVGSI---GQKQAAPYVATKGAITA 168
Query: 181 ATRSLSIDLKGDKIIATAMHPGWVKTDM 208
T++L++D + + PG + T +
Sbjct: 169 MTKALAVDESRYGVRVNCISPGNIWTPL 196
|
These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261 |
| >gnl|CDD|181762 PRK09291, PRK09291, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 53.1 bits (128), Expect = 2e-08
Identities = 56/204 (27%), Positives = 86/204 (42%), Gaps = 31/204 (15%)
Query: 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHS-NLHVIE 59
K+ILITG G G + L G+N + A + + L A A + L V +
Sbjct: 2 SKTILITGAGSGFGREVALRLARKGHN----VIAGVQIAPQVTALRAEAARRGLALRVEK 57
Query: 60 LDVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTA 119
LD+TD + D+ +VL+NNAGI + + E + + F NV
Sbjct: 58 LDLTDAIDRAQAAEWDV---------DVLLNNAGIGEAGA-VVDIPVELVRELFETNVFG 107
Query: 120 PLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALN 179
PL LT+ + + + + +V SS+ G I G Y SK AL
Sbjct: 108 PLELTQGFVRKM-----------VARGKGKVVFTSSMAGLITGPFTG---AYCASKHALE 153
Query: 180 AATRSLSIDLKGDKI-IATAMHPG 202
A ++ +LK I +AT ++PG
Sbjct: 154 AIAEAMHAELKPFGIQVAT-VNPG 176
|
Length = 257 |
| >gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 52.6 bits (126), Expect = 3e-08
Identities = 52/206 (25%), Positives = 86/206 (41%), Gaps = 28/206 (13%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K ++TG G+G + + G+ +FA + A A NL + D
Sbjct: 2 KVAIVTGGGHGIGKQICLDFLEAGDKV---VFADIDEERGADFAEAEGP---NLFFVHGD 55
Query: 62 VTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPL 121
V D + + V++ + K ++VLVNNA +K L L E+ VN+T P
Sbjct: 56 VADETLVKFVVYAMLE---KLGRIDVLVNNAARGSK-GILSSLLLEEWDRILSVNLTGPY 111
Query: 122 MLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG-SIEDNTQGGFHPYRCSKAALNA 180
L++ L K ++ I+N++S E +++ Y SK L A
Sbjct: 112 ELSRYCRDELIK------------NKGRIINIASTRAFQSEPDSE----AYAASKGGLVA 155
Query: 181 ATRSLSIDLKGDKIIATAMHPGWVKT 206
T +L++ L G I + PGW+ T
Sbjct: 156 LTHALAMSL-GPDIRVNCISPGWINT 180
|
This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242 |
| >gnl|CDD|182051 PRK09730, PRK09730, putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 52.5 bits (126), Expect = 3e-08
Identities = 58/212 (27%), Positives = 92/212 (43%), Gaps = 17/212 (8%)
Query: 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLAL-AQQHSNLHVIE 59
M L+TG +RG+G +L G + +N A E++ L Q V++
Sbjct: 1 MAIALVTGGSRGIGRATALLLAQEGYTVAVNYQ---QNLHAAQEVVNLITQAGGKAFVLQ 57
Query: 60 LDVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTA 119
D++D Q +F I D+ L LVNNAGI + L E++ NVT
Sbjct: 58 ADISD-ENQVVAMFTAIDQ--HDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTG 114
Query: 120 PLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALN 179
+ + + K+ + + G S AIVNVSS + G + Y SK A++
Sbjct: 115 YFLCCREAV---KRMALKH-----GGSGGAIVNVSSAASRL--GAPGEYVDYAASKGAID 164
Query: 180 AATRSLSIDLKGDKIIATAMHPGWVKTDMGGS 211
T LS+++ I + PG++ T+M S
Sbjct: 165 TLTTGLSLEVAAQGIRVNCVRPGFIYTEMHAS 196
|
Length = 247 |
| >gnl|CDD|171531 PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 52.6 bits (126), Expect = 3e-08
Identities = 59/209 (28%), Positives = 91/209 (43%), Gaps = 28/209 (13%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K +ITGCN GLG GM L G + A VE L H I D
Sbjct: 9 KVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALG-----RKFHFITAD 63
Query: 62 VTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAP 120
+ QQ + +S V+ G +++L+NNAGI R LL+ ++N+
Sbjct: 64 LI----QQKDIDSIVSQAVEVMGHIDILINNAGI---IRRQDLLEFGNKDWDDVININQ- 115
Query: 121 LMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFH--PYRCSKAAL 178
KT+ L + ++ G I+N++S++ + QGG Y SK+A+
Sbjct: 116 ----KTVFFLSQAVAKQFVKQGNGGK---IINIASML-----SFQGGIRVPSYTASKSAV 163
Query: 179 NAATRSLSIDLKGDKIIATAMHPGWVKTD 207
TR+L+ +L I A+ PG++ TD
Sbjct: 164 MGLTRALATELSQYNINVNAIAPGYMATD 192
|
Length = 251 |
| >gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 52.2 bits (126), Expect = 4e-08
Identities = 66/231 (28%), Positives = 98/231 (42%), Gaps = 66/231 (28%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKA-----VELLALAQQHSNLH 56
K L+TG + G+G + L G +F T RN +A VELL
Sbjct: 5 KVALVTGASSGIGRATAEKLARAG----YRVFGTSRNPARAAPIPGVELL---------- 50
Query: 57 VIELDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKP------EQM 109
ELDVTD + Q + +V+ G ++VLVNNAG+ GL Q
Sbjct: 51 --ELDVTDDASVQAA----VDEVIARAGRIDVLVNNAGV-------GLAGAAEESSIAQA 97
Query: 110 TDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFH 169
F NV L +T+ +LP ++ GS R I+N+SS++ GF
Sbjct: 98 QALFDTNVFGILRMTRAVLPHMRAQ---------GSGR--IINISSVL---------GFL 137
Query: 170 P------YRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAP 214
P Y SK A+ + SL +++ I + + P + KT+ +NAP
Sbjct: 138 PAPYMALYAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNF-DANAP 187
|
Length = 270 |
| >gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 52.1 bits (125), Expect = 5e-08
Identities = 52/212 (24%), Positives = 92/212 (43%), Gaps = 29/212 (13%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K L+TG G+GLG+ + L G N + F + +AV A+ + D
Sbjct: 3 KVALVTGSTSGIGLGIARALAAAGANIVLNGFGD-AAEIEAVRAGLAAKHGVKVLYHGAD 61
Query: 62 VTDFSKQQDVLFKDISDVVKDQ--GLNVLVNNAGI--AAKFTRLGLLKPEQMTDHFL-VN 116
++ + +D+ + Q G+++LVNNAGI A P + D + +N
Sbjct: 62 LSKPAA-----IEDMVAYAQRQFGGVDILVNNAGIQHVAPIEDF----PTEKWDAIIALN 112
Query: 117 VTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKA 176
++A T+ LP +KK G R I+N++S+ G + Y +K
Sbjct: 113 LSAVFHTTRLALPHMKKQ---------GWGR--IINIASVHGLV---ASANKSAYVAAKH 158
Query: 177 ALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
+ T+ ++++ G + A+ PGWV T +
Sbjct: 159 GVVGLTKVVALETAGTGVTCNAICPGWVLTPL 190
|
DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258 |
| >gnl|CDD|181508 PRK08628, PRK08628, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 51.9 bits (125), Expect = 6e-08
Identities = 58/226 (25%), Positives = 86/226 (38%), Gaps = 57/226 (25%)
Query: 2 KSILITGCNRGLGLGMIKVL-------VGLGNNQPAHIFATCRNKDKAVELLALAQQHSN 54
K +++TG G+G + L V G + P FA L
Sbjct: 8 KVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAE-----------ELRALQPR 56
Query: 55 LHVIELDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHF 113
+++D+TD ++ +D + V G ++ LVNNAG+ +GL E + F
Sbjct: 57 AEFVQVDLTDDAQCRDA----VEQTVAKFGRIDGLVNNAGVN---DGVGL---EAGREAF 106
Query: 114 LV----NVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFH 169
+ N+ ++ LP LK SR AIVN+SS QGG
Sbjct: 107 VASLERNLIHYYVMAHYCLPHLKA------------SRGAIVNISS---KTALTGQGGTS 151
Query: 170 PYRCSKAALNAATRSLSIDLKGDK------IIATAMHP---GWVKT 206
Y +K A A TR ++ L D I A M P W+ T
Sbjct: 152 GYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIAT 197
|
Length = 258 |
| >gnl|CDD|187645 cd08941, 3KS_SDR_c, 3-keto steroid reductase, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 51.2 bits (123), Expect = 9e-08
Identities = 60/253 (23%), Positives = 94/253 (37%), Gaps = 61/253 (24%)
Query: 2 KSILITGCNRGLGLGMIK-VLVGLGNNQPAHIFATCRNKDKAVELL-ALAQQHSNLHVIE 59
K +L+TG N GLGL + + +L N + CRN +A AL H + +
Sbjct: 2 KVVLVTGANSGLGLAICERLLAEDDENPELTLILACRNLQRAEAACRALLASHPD-ARVV 60
Query: 60 LDV--TDFSKQQDVL--FKDISDVVKDQGLNVLVNNAGIAA------------------- 96
D D S V K++ + L+ L NAGI
Sbjct: 61 FDYVLVDLSNMVSVFAAAKELKK--RYPRLDYLYLNAGIMPNPGIDWIGAIKEVLTNPLF 118
Query: 97 -------KFTRLGLLKPEQMTDH------FLVNVTAPLMLTKTMLPLLKKASEANSAAPL 143
K GLL F NV L + + PLL ++
Sbjct: 119 AVTNPTYKIQAEGLLSQGDKATEDGLGEVFQTNVFGHYYLIRELEPLLCRSD-------- 170
Query: 144 GSSRAAIVNVSSIMGSIE----DNTQG--GFHPYRCSKAALNAATRSLSIDLKGDK--II 195
G S+ I+ SS+ S + ++ Q G PY SK ++ SL+++ K +K +
Sbjct: 171 GGSQ--IIWTSSLNASPKYFSLEDIQHLKGPAPYSSSKYLVDLL--SLALNRKFNKLGVY 226
Query: 196 ATAMHPGWVKTDM 208
+ +HPG T++
Sbjct: 227 SYVVHPGICTTNL 239
|
3-keto steroid reductase (in concert with other enzymes) catalyzes NADP-dependent sterol C-4 demethylation, as part of steroid biosynthesis. 3-keto reductase is a classical SDR, with a well conserved canonical active site tetrad and fairly well conserved characteristic NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 290 |
| >gnl|CDD|183714 PRK12742, PRK12742, oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 50.9 bits (122), Expect = 1e-07
Identities = 60/217 (27%), Positives = 91/217 (41%), Gaps = 36/217 (16%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K +L+ G +RG+G +++ V G N F +KD A E LA + + ++ D
Sbjct: 7 KKVLVLGGSRGIGAAIVRRFVTDGANV---RFTYAGSKDAA-ERLA-QETGAT--AVQTD 59
Query: 62 VTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAP 120
D + DVV+ G L++LV NAGIA L L + + F +N+ AP
Sbjct: 60 SADRDA--------VIDVVRKSGALDILVVNAGIAVFGDALEL-DADDIDRLFKINIHAP 110
Query: 121 LMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQ--GGFHPYRCSKAAL 178
+ EA P G I+ I+GS+ + G Y SK+AL
Sbjct: 111 Y----------HASVEAARQMPEGGR---II----IIGSVNGDRMPVAGMAAYAASKSAL 153
Query: 179 NAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPL 215
R L+ D I + PG + TD +N P+
Sbjct: 154 QGMARGLARDFGPRGITINVVQPGPIDTDANPANGPM 190
|
Length = 237 |
| >gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 50.6 bits (121), Expect = 1e-07
Identities = 58/207 (28%), Positives = 89/207 (42%), Gaps = 22/207 (10%)
Query: 5 LITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTD 64
L+TG + G+G + + LV + R DK L A Q + D
Sbjct: 10 LVTGASVGIGAAVARALV----QHGMKVVGCARRVDKIEALAAECQSAGYPTLFPYQC-D 64
Query: 65 FSKQQDVL--FKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLM 122
S ++ +L F I + QG++V +NNAG+A L K E + F VNV A +
Sbjct: 65 LSNEEQILSMFSAIRT--QHQGVDVCINNAGLARPEPLLS-GKTEGWKEMFDVNVLALSI 121
Query: 123 LTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNAAT 182
T+ + E N I+N++S+ G FH Y +K A+ A T
Sbjct: 122 CTREA---YQSMKERN------VDDGHIININSMSGHRVP-PVSVFHFYAATKHAVTALT 171
Query: 183 RSLSIDLKGDK--IIATAMHPGWVKTD 207
L +L+ K I AT++ PG V+T+
Sbjct: 172 EGLRQELREAKTHIRATSISPGLVETE 198
|
Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250 |
| >gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 51.0 bits (122), Expect = 2e-07
Identities = 51/204 (25%), Positives = 82/204 (40%), Gaps = 27/204 (13%)
Query: 4 ILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELL-ALAQQHSNLHVIELDV 62
+ ITG RG+G + G+ + R+ + A +L AL +H ++ D+
Sbjct: 272 VAITGGARGIGRAVADRFAAAGDR----LLIIDRDAEGAKKLAEALGDEHL---SVQADI 324
Query: 63 TDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLM 122
TD + F I L+VLVNNAGIA F E T + VN++
Sbjct: 325 TD-EAAVESAFAQIQARWGR--LDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFA 381
Query: 123 LTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNAAT 182
+ L+ + IVN+ SI + + Y SKAA+ +
Sbjct: 382 CARAAARLMSQGG-------------VIVNLGSIASLL---ALPPRNAYCASKAAVTMLS 425
Query: 183 RSLSIDLKGDKIIATAMHPGWVKT 206
RSL+ + I + PG+++T
Sbjct: 426 RSLACEWAPAGIRVNTVAPGYIET 449
|
Length = 520 |
| >gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 50.6 bits (121), Expect = 2e-07
Identities = 47/209 (22%), Positives = 81/209 (38%), Gaps = 34/209 (16%)
Query: 5 LITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELL-ALAQQHSNLHVIELDVT 63
+ITG G+G + G A + + N D A ++ + Q D+T
Sbjct: 15 IITGAGAGIGKEIAITFATAG----ASVVVSDINADAANHVVDEIQQLGGQAFACRCDIT 70
Query: 64 DFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQM-TDHFL----VNVT 118
+ + +S + K +++LVNNAG G KP M F +NV
Sbjct: 71 SEQELSALADFALSKLGK---VDILVNNAG-------GGGPKPFDMPMADFRRAYELNVF 120
Query: 119 APLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAAL 178
+ L++ + P ++K I+ ++S+ +N Y SKAA
Sbjct: 121 SFFHLSQLVAPEMEKNGGG-----------VILTITSMAA---ENKNINMTSYASSKAAA 166
Query: 179 NAATRSLSIDLKGDKIIATAMHPGWVKTD 207
+ R+++ DL I + PG + TD
Sbjct: 167 SHLVRNMAFDLGEKNIRVNGIAPGAILTD 195
|
Length = 255 |
| >gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR | Back alignment and domain information |
|---|
Score = 50.2 bits (120), Expect = 2e-07
Identities = 57/212 (26%), Positives = 93/212 (43%), Gaps = 37/212 (17%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNK---DKAVELLALAQQHSNLHVI 58
K +++TG +G+G G+ + L G G A + R++ + E+LA HV
Sbjct: 5 KVVVVTGAAQGIGRGVAERLAGEG----ARVLLVDRSELVHEVLAEILAAGDA---AHVH 57
Query: 59 ELDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAG--IAAKFTRLGLLKPEQMTDHFLV 115
D+ ++ Q V + V+ G ++VL+NN G I AK + EQ+
Sbjct: 58 TADLETYAGAQGV----VRAAVERFGRVDVLINNVGGTIWAKP--YEHYEEEQIEAEIRR 111
Query: 116 NVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFH-PYRCS 174
++ L + +LP + L + IVNVSSI T+G + PY +
Sbjct: 112 SLFPTLWCCRAVLPHM-----------LERQQGVIVNVSSI------ATRGIYRIPYSAA 154
Query: 175 KAALNAATRSLSIDLKGDKIIATAMHPGWVKT 206
K +NA T SL+ + D I A+ PG +
Sbjct: 155 KGGVNALTASLAFEHARDGIRVNAVAPGGTEA 186
|
DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256 |
| >gnl|CDD|234422 TIGR03971, SDR_subfam_1, oxidoreductase, SDR family | Back alignment and domain information |
|---|
Score = 50.2 bits (120), Expect = 2e-07
Identities = 39/161 (24%), Positives = 66/161 (40%), Gaps = 17/161 (10%)
Query: 59 ELDVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVT 118
+ DV D ++ + V+ + + L+V+V NAG+ + + R L EQ +N+T
Sbjct: 71 KADVRDLAEVRAVVEDGVEQFGR---LDVVVANAGVLS-YGRSWELSEEQWDTVLDINLT 126
Query: 119 APLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAAL 178
K ++P + + S I+ SS+ G G H Y +K L
Sbjct: 127 GVWRTCKAVVPHMIERGNGGS----------IIITSSVAGLK--ALPGLAH-YAAAKHGL 173
Query: 179 NAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGA 219
T++L+ +L I ++HP V T M A E
Sbjct: 174 VGLTKTLANELAEYGIRVNSIHPYSVDTPMIAPEAMREAFL 214
|
Members of this protein subfamily are putative oxidoreductases belonging to the larger SDR family. Members of the present subfamily may occur several to a genome and are largely restricted to genomes that contain members of families TIGR03962, TIGR03967, and TIGR03969. Many members have been annotated by homology as carveol dehydrogenases. Length = 265 |
| >gnl|CDD|188170 TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Score = 50.1 bits (120), Expect = 2e-07
Identities = 56/212 (26%), Positives = 87/212 (41%), Gaps = 34/212 (16%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K L+TG N GLG G+ L G A I R E QQ L L
Sbjct: 6 KVALVTGANTGLGQGIAVGLAEAG----ADIVGAGR-----SEPSETQQQVEALGRRFLS 56
Query: 62 VT-DFSKQQDVLFKDISDVVKDQG--LNVLVNNAGIAAKFTRLGLLKPEQMTDHFL-VNV 117
+T D S + + K + D ++ +++LVNNAGI + E+ D + VN+
Sbjct: 57 LTADLSDIEAI--KALVDSAVEEFGHIDILVNNAGIIRRADAEEF--SEKDWDDVMNVNL 112
Query: 118 TAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFH--PYRCSK 175
+ LT+ A G I+N++S++ + QGG Y SK
Sbjct: 113 KSVFFLTQAA---------AKHFLKQG-RGGKIINIASML-----SFQGGIRVPSYTASK 157
Query: 176 AALNAATRSLSIDLKGDKIIATAMHPGWVKTD 207
A+ T+ L+ + I A+ PG++ T+
Sbjct: 158 HAVAGLTKLLANEWAAKGINVNAIAPGYMATN 189
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 248 |
| >gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases | Back alignment and domain information |
|---|
Score = 50.1 bits (120), Expect = 2e-07
Identities = 52/208 (25%), Positives = 82/208 (39%), Gaps = 22/208 (10%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K L+TG +G+G G+ + L G A + + Q +LD
Sbjct: 1 KVALVTGGAQGIGKGIAERLAKDGFAV---AVADLNEETAKETAKEINQAGGKAVAYKLD 57
Query: 62 VTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAP 120
V+D +D +F I + G +V+VNNAG+A T + + E++ + VNV
Sbjct: 58 VSD----KDQVFSAIDQAAEKFGGFDVMVNNAGVAP-ITPILEITEEELKKVYNVNVKGV 112
Query: 121 LMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNA 180
L + KK I+N +SI G + Y +K A+
Sbjct: 113 LFGIQAAARQFKKQG----------HGGKIINAASIAGHEGNPILSA---YSSTKFAVRG 159
Query: 181 ATRSLSIDLKGDKIIATAMHPGWVKTDM 208
T++ + +L I A PG VKT M
Sbjct: 160 LTQTAAQELAPKGITVNAYCPGIVKTPM 187
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254 |
| >gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8 | Back alignment and domain information |
|---|
Score = 50.0 bits (120), Expect = 2e-07
Identities = 49/216 (22%), Positives = 86/216 (39%), Gaps = 31/216 (14%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQH--SNLHVIE 59
K ILITG +G K L+ G A + N +L + + +E
Sbjct: 3 KIILITGAAGLIGKAFCKALLSAG----ARLILADINAPALEQLKEELTNLYKNRVIALE 58
Query: 60 LDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAK--FTRLGLLKPEQMTDHFLVN 116
LD+T SK+ + + I ++ G +++L+NNA + K +R EQ + VN
Sbjct: 59 LDIT--SKES--IKELIESYLEKFGRIDILINNAYPSPKVWGSRFEEFPYEQWNEVLNVN 114
Query: 117 VTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQ--GGFHP---- 170
+ + ++ + L KK + +I+N++SI G I + +
Sbjct: 115 LGGAFLCSQAFIKLFKK-----------QGKGSIINIASIYGVIAPDFRIYENTQMYSPV 163
Query: 171 -YRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVK 205
Y KA + T+ L+ I A+ PG +
Sbjct: 164 EYSVIKAGIIHLTKYLAKYYADTGIRVNAISPGGIL 199
|
This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250 |
| >gnl|CDD|180399 PRK06101, PRK06101, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 49.9 bits (119), Expect = 2e-07
Identities = 54/213 (25%), Positives = 78/213 (36%), Gaps = 32/213 (15%)
Query: 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIEL 60
M ++LITG G+G K L Q + A RN+ EL Q +N+ +
Sbjct: 1 MTAVLITGATSGIG----KQLALDYAKQGWQVIACGRNQSVLDEL---HTQSANIFTLAF 53
Query: 61 DVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAP 120
DVTD + L + + + NAG ++ G + M F VNV
Sbjct: 54 DVTDHPGTKAAL-----SQLPFIP-ELWIFNAG-DCEYMDDGKVDATLMARVFNVNVLGV 106
Query: 121 LMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQ-GGFHPYRCSKAALN 179
+ + P L R IV GSI Y SKAA+
Sbjct: 107 ANCIEGIQPHLSCG-----------HRVVIV------GSIASELALPRAEAYGASKAAVA 149
Query: 180 AATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN 212
R+L +DL+ I + PG+V T + N
Sbjct: 150 YFARTLQLDLRPKGIEVVTVFPGFVATPLTDKN 182
|
Length = 240 |
| >gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 49.9 bits (120), Expect = 3e-07
Identities = 53/216 (24%), Positives = 86/216 (39%), Gaps = 43/216 (19%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL-LALAQQHSNLHVIEL 60
K L+TG G+GL + L G A + N + A AL + + +
Sbjct: 5 KVALVTGAASGIGLEIALALAKEG----AKVVIADLNDEAAAAAAEALQKAGGKAIGVAM 60
Query: 61 DVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGI--AAKFTRLGLLKPEQMTDHFLVNV 117
DVTD I V+ G +++LVNNAGI A K ++M + +
Sbjct: 61 DVTDEEAINAG----IDYAVETFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIA---IML 113
Query: 118 TAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAA 177
+ TK LP++K G R I+N++S+ G + G KAA
Sbjct: 114 DGAFLTTKAALPIMKAQ---------GGGR--IINMASVHGLV------GSA----GKAA 152
Query: 178 LNAA-------TRSLSIDLKGDKIIATAMHPGWVKT 206
+A T+ ++++ + A+ PG+V T
Sbjct: 153 YVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDT 188
|
Length = 258 |
| >gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 49.8 bits (119), Expect = 3e-07
Identities = 54/208 (25%), Positives = 95/208 (45%), Gaps = 28/208 (13%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K +ITG + G+G L + A++ A + + + + +D
Sbjct: 7 KVAVITGASTGIGQASAIALA----QEGAYVLAVDIAEAVSETVDKIKSNGGKAKAYHVD 62
Query: 62 VTDFSKQQDVLFKDISDVVKDQ--GLNVLVNNAGIAAKFTRLGLLKPEQMTDHFL-VNVT 118
++D +Q V KD + +K+Q ++VL NNAG+ R+ P + D + V++
Sbjct: 63 ISD---EQQV--KDFASEIKEQFGRVDVLFNNAGVDNAAGRIHEY-PVDVFDKIMAVDMR 116
Query: 119 APLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAAL 178
++TK +LPL+ + GS I+N SS G D + G Y +K A+
Sbjct: 117 GTFLMTKMLLPLMMEQG--------GS----IINTSSFSGQAADLYRSG---YNAAKGAV 161
Query: 179 NAATRSLSIDLKGDKIIATAMHPGWVKT 206
T+S++I+ D I A A+ PG ++T
Sbjct: 162 INFTKSIAIEYGRDGIRANAIAPGTIET 189
|
Length = 272 |
| >gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 50.0 bits (120), Expect = 3e-07
Identities = 52/214 (24%), Positives = 87/214 (40%), Gaps = 47/214 (21%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K I++TG + G+GL ++K L+ G A N D + QH N + D
Sbjct: 10 KIIIVTGGSSGIGLAIVKELLANG--------ANVVNAD----IHGGDGQHENYQFVPTD 57
Query: 62 VTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTD--------- 111
V+ + + ++++++ G ++ LVNNAGI RL L E+
Sbjct: 58 VSS----AEEVNHTVAEIIEKFGRIDGLVNNAGI--NIPRL--LVDEKDPAGKYELNEAA 109
Query: 112 ---HFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGF 168
F +N ++++ + + + IVN+SS G Q
Sbjct: 110 FDKMFNINQKGVFLMSQAVARQM-----------VKQHDGVIVNMSSEAGLEGSEGQS-- 156
Query: 169 HPYRCSKAALNAATRSLSIDLKGDKIIATAMHPG 202
Y +KAALN+ TRS + +L I + PG
Sbjct: 157 -CYAATKAALNSFTRSWAKELGKHNIRVVGVAPG 189
|
Length = 266 |
| >gnl|CDD|183718 PRK12746, PRK12746, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 49.6 bits (118), Expect = 3e-07
Identities = 61/218 (27%), Positives = 90/218 (41%), Gaps = 38/218 (17%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIEL 60
K L+TG +RG+G + L G H RNK A E + + +IE
Sbjct: 7 KVALVTGASRGIGRAIAMRLANDGALVAIHY---GRNKQAADETIREIESNGGKAFLIEA 63
Query: 61 D---VTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFL-VN 116
D + K + L ++ V +++LVNNAGI + T E++ D + VN
Sbjct: 64 DLNSIDGVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIEN--TTEEIFDEIMAVN 121
Query: 117 VTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSS------IMGSIEDNTQGGFHP 170
+ AP L + LPLL+ + ++N+SS GSI
Sbjct: 122 IKAPFFLIQQTLPLLR-------------AEGRVINISSAEVRLGFTGSI---------A 159
Query: 171 YRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
Y SK ALN T L+ L I + PG+ KTD+
Sbjct: 160 YGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDI 197
|
Length = 254 |
| >gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 49.8 bits (119), Expect = 3e-07
Identities = 54/213 (25%), Positives = 94/213 (44%), Gaps = 25/213 (11%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIEL 60
K L+TG + GLG +VL G A + R ++ EL A + + HV+ L
Sbjct: 10 KVALVTGASSGLGARFAQVLAQAG----AKVVLASRRVERLKELRAEIEAEGGAAHVVSL 65
Query: 61 DVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTA 119
DVTD + ++ + G +++LVNN+G++ +L + P F N
Sbjct: 66 DVTD----YQSIKAAVAHAETEAGTIDILVNNSGVSTT-QKLVDVTPADFDFVFDTNTRG 120
Query: 120 PLMLT----KTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSK 175
+ K M+ A + R I+N++S+ G + Q G Y SK
Sbjct: 121 AFFVAQEVAKRMI-----ARAKGAGNTKPGGR--IINIASVAG-LRVLPQIGL--YCMSK 170
Query: 176 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
AA+ TR+++++ I A+ PG++ T++
Sbjct: 171 AAVVHMTRAMALEWGRHGINVNAICPGYIDTEI 203
|
Length = 258 |
| >gnl|CDD|187636 cd08931, SDR_c9, classical (c) SDR, subgroup 9 | Back alignment and domain information |
|---|
Score = 49.4 bits (118), Expect = 4e-07
Identities = 50/218 (22%), Positives = 76/218 (34%), Gaps = 44/218 (20%)
Query: 2 KSILITGCNRGLGLGMIKVL------VGLGNNQPAHIFATCRNKDKAVELLALAQQHSNL 55
K+I ITG G+G + VGL + ++D L A N+
Sbjct: 1 KAIFITGAASGIGRETALLFARNGWFVGLYD----------IDEDGLAALAA-ELGAENV 49
Query: 56 HVIELDVTDFSKQQDVLFKDISDVVKDQG--LNVLVNNAGIAAKFTRLGLLKPEQMTDHF 113
LDVTD + ++D G L+ L NNAG+ R G + + H
Sbjct: 50 VAGALDVTD----RAAWAAALADFAAATGGRLDALFNNAGVG----RGGPFEDVPLAAHD 101
Query: 114 L---VNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHP 170
+NV L LP LK A ++N +S Q
Sbjct: 102 RMVDINVKGVLNGAYAALPYLKATPGAR-----------VINTASSSAIY---GQPDLAV 147
Query: 171 YRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
Y +K A+ T +L ++ I + P +V T +
Sbjct: 148 YSATKFAVRGLTEALDVEWARHGIRVADVWPWFVDTPI 185
|
This subgroup has the canonical active site tetrad and NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 227 |
| >gnl|CDD|168204 PRK05717, PRK05717, oxidoreductase; Validated | Back alignment and domain information |
|---|
Score = 49.5 bits (118), Expect = 4e-07
Identities = 59/206 (28%), Positives = 92/206 (44%), Gaps = 32/206 (15%)
Query: 5 LITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELL-ALAQQHSNLHVIELDVT 63
L+TG RG+GLG+ L+ G + ++++ ++ AL N I +DV
Sbjct: 14 LVTGAARGIGLGIAAWLIAEG----WQVVLADLDRERGSKVAKALG---ENAWFIAMDVA 66
Query: 64 DFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKF-TRLGLLKPEQMTDHFLVNVTAPL 121
D + + +++V+ G L+ LV NA IA T L L VN+T P+
Sbjct: 67 D----EAQVAAGVAEVLGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPM 122
Query: 122 MLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS-IEDNTQGGFHPYRCSKAALNA 180
+L K P L+ + AIVN++S E +T+ Y SK L A
Sbjct: 123 LLAKHCAPYLR------------AHNGAIVNLASTRARQSEPDTEA----YAASKGGLLA 166
Query: 181 ATRSLSIDLKGDKIIATAMHPGWVKT 206
T +L+I L G +I A+ PGW+
Sbjct: 167 LTHALAISL-GPEIRVNAVSPGWIDA 191
|
Length = 255 |
| >gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 49.1 bits (117), Expect = 4e-07
Identities = 50/217 (23%), Positives = 85/217 (39%), Gaps = 25/217 (11%)
Query: 4 ILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA--LAQQHSNLHVIELD 61
IL+TG + G+G G A + RN++K ++ + LD
Sbjct: 7 ILVTGASDGIGREAALTYARYG----ATVILLGRNEEKLRQVADHINEEGGRQPQWFILD 62
Query: 62 VTDFSKQQDVLFKDISDVVKDQ--GLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTA 119
+ + + + ++ + L+ +++NAG+ L P+ D VNV A
Sbjct: 63 LLTCTSEN---CQQLAQRIAVNYPRLDGVLHNAGLLGDVCPLSEQNPQVWQDVXQVNVNA 119
Query: 120 PLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALN 179
MLT+ +LPLL K S ++V SS +G G Y SK A
Sbjct: 120 TFMLTQALLPLLLK-----------SDAGSLVFTSSSVGRQGRANWGA---YAVSKFATE 165
Query: 180 AATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLE 216
+ L+ + + + ++PG +T M S P E
Sbjct: 166 GLXQVLADEYQQRNLRVNCINPGGTRTAMRASAFPTE 202
|
Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236 |
| >gnl|CDD|235737 PRK06197, PRK06197, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 49.6 bits (119), Expect = 4e-07
Identities = 61/227 (26%), Positives = 86/227 (37%), Gaps = 52/227 (22%)
Query: 5 LITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDK---AVELLALAQQHSNLHVIELD 61
++TG N GLG L G AH+ RN DK A + A +++ + ELD
Sbjct: 20 VVTGANTGLGYETAAALAAKG----AHVVLAVRNLDKGKAAAARITAATPGADVTLQELD 75
Query: 62 VTDFS---KQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTD-----HF 113
+T + D L +++L+NNAG+ + P+Q T F
Sbjct: 76 LTSLASVRAAADALRAAYPR------IDLLINNAGV--------MYTPKQTTADGFELQF 121
Query: 114 LVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSS----IMGSIE-DNTQ--- 165
N LT +L L P+ SR +V VSS I +I D+ Q
Sbjct: 122 GTNHLGHFALTGLLLDRLL---------PVPGSR--VVTVSSGGHRIRAAIHFDDLQWER 170
Query: 166 --GGFHPYRCSKAALNAATRSLS--IDLKGDKIIATAMHPGWVKTDM 208
Y SK A T L + G IA A HPG T++
Sbjct: 171 RYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTEL 217
|
Length = 306 |
| >gnl|CDD|180343 PRK05993, PRK05993, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 49.3 bits (118), Expect = 4e-07
Identities = 56/212 (26%), Positives = 93/212 (43%), Gaps = 38/212 (17%)
Query: 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIEL 60
+SILITGC+ G+G + L + +FATCR K ++ AL + L +L
Sbjct: 4 KRSILITGCSSGIGAYCARAL----QSDGWRVFATCR---KEEDVAALEAE--GLEAFQL 54
Query: 61 DVTDFSKQQDVLFKDISDVVK------DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFL 114
D + + I+ +V L+ L NN G + + L E + F
Sbjct: 55 DYAE--------PESIAALVAQVLELSGGRLDALFNN-GAYGQPGAVEDLPTEALRAQFE 105
Query: 115 VNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCS 174
N LT+ ++P+++K G R IV SSI+G + +G Y S
Sbjct: 106 ANFFGWHDLTRRVIPVMRKQ---------GQGR--IVQCSSILGLVPMKYRGA---YNAS 151
Query: 175 KAALNAATRSLSIDLKGDKIIATAMHPGWVKT 206
K A+ + +L ++L+G I + + PG ++T
Sbjct: 152 KFAIEGLSLTLRMELQGSGIHVSLIEPGPIET 183
|
Length = 277 |
| >gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 49.3 bits (118), Expect = 4e-07
Identities = 50/212 (23%), Positives = 88/212 (41%), Gaps = 25/212 (11%)
Query: 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQH-SNLHVIE 59
K +++TG RG+G + V L + + ++ E L + +++ +
Sbjct: 6 DKVVVVTGSGRGIGR---AIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVL 62
Query: 60 LDVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTA 119
DV+ + + I ++LVNNAG LGL P D L++
Sbjct: 63 ADVSTREGCETLAKATIDRY---GVADILVNNAG-------LGLFSPFLNVDDKLIDK-- 110
Query: 120 PLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALN 179
++ ++ + E G + IVN++S+ G G Y KAA+
Sbjct: 111 --HISTDFKSVIYCSQELAKEMREGGA---IVNIASVAGIR---PAYGLSIYGAMKAAVI 162
Query: 180 AATRSLSIDLKGDKIIATAMHPGWVKTDMGGS 211
T+ L+++L KI A+ PG+VKT +G S
Sbjct: 163 NLTKYLALELA-PKIRVNAIAPGFVKTKLGES 193
|
Length = 252 |
| >gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 49.9 bits (120), Expect = 5e-07
Identities = 60/220 (27%), Positives = 88/220 (40%), Gaps = 45/220 (20%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHS-NLHVIEL 60
K +LITG + G+G + G A +F RN + EL+A + H
Sbjct: 372 KVVLITGASSGIGRATAIKVAEAG----ATVFLVARNGEALDELVAEIRAKGGTAHAYTC 427
Query: 61 DVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAG------IAAKFTRLGLLKPEQMTDHF 113
D+TD S D KDI + + G ++ LVNNAG + R H
Sbjct: 428 DLTD-SAAVDHTVKDI---LAEHGHVDYLVNNAGRSIRRSVENSTDRF----------HD 473
Query: 114 L-----VNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGF 168
VN + L +LP +++ +VNVSSI G + + F
Sbjct: 474 YERTMAVNYFGAVRLILGLLPHMRE-----------RRFGHVVNVSSI-GVQTNAPR--F 519
Query: 169 HPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
Y SKAAL+A + + + D I T +H V+T M
Sbjct: 520 SAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPM 559
|
Length = 657 |
| >gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 49.0 bits (117), Expect = 5e-07
Identities = 47/213 (22%), Positives = 80/213 (37%), Gaps = 34/213 (15%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
+ ++TG G+G K+ G A + R+ + A + A + D
Sbjct: 6 RVAIVTGAGSGIGRATAKLFAREG----ARVVVADRDAEAAERVAAAIAAGGRAFARQGD 61
Query: 62 VTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLL---KPEQMTDHFLVNV 117
V ++ + L + V G L+VLVNNAG F G + VNV
Sbjct: 62 VGS-AEAVEAL---VDFVAARWGRLDVLVNNAG----FGCGGTVVTTDEADWDAVMRVNV 113
Query: 118 TAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSS--IMGSIEDNTQGGFHPYRCSK 175
+ K +P++++ +IVN +S + Y SK
Sbjct: 114 GGVFLWAKYAIPIMQRQGGG-----------SIVNTASQLALAGGRGRAA-----YVASK 157
Query: 176 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
A+ + TR++++D D I A+ PG + T
Sbjct: 158 GAIASLTRAMALDHATDGIRVNAVAPGTIDTPY 190
|
Length = 252 |
| >gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | Back alignment and domain information |
|---|
Score = 48.8 bits (117), Expect = 6e-07
Identities = 58/209 (27%), Positives = 90/209 (43%), Gaps = 31/209 (14%)
Query: 5 LITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIELDVT 63
L+TG +G+G + + L G A + A RN ++ +EL+A L + +LDV
Sbjct: 2 LVTGAAQGIGYAVARALAEAG----ARVAAVDRNFEQLLELVADLRRYGYPFATYKLDVA 57
Query: 64 DFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGL---LKPEQMTDHFLVNVTA 119
D S D + + + ++ G ++VLVN AGI RLG L E F VN
Sbjct: 58 D-SAAVD---EVVQRLEREYGPIDVLVNVAGI----LRLGAIDSLSDEDWQATFAVNTFG 109
Query: 120 PLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALN 179
+++ + P +K+ AIV V S ++ Y SKAAL
Sbjct: 110 VFNVSQAVSPRMKRRR-----------SGAIVTVGSNAANVPRMGMAA---YAASKAALT 155
Query: 180 AATRSLSIDLKGDKIIATAMHPGWVKTDM 208
T+ L ++L I + PG T+M
Sbjct: 156 MLTKCLGLELAPYGIRCNVVSPGSTDTEM 184
|
Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250 |
| >gnl|CDD|183719 PRK12747, PRK12747, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 48.5 bits (115), Expect = 7e-07
Identities = 59/249 (23%), Positives = 92/249 (36%), Gaps = 44/249 (17%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAV--------ELLALAQQHS 53
K L+TG +RG+G + K L G H ++ V ++
Sbjct: 5 KVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLE 64
Query: 54 NLHVIELDVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIA-AKFTRLGLLKPEQMTDH 112
+LH +E L ++ + ++L+NNAGI F E+ T+
Sbjct: 65 SLHGVE-------ALYSSLDNELQNRTGSTKFDILINNAGIGPGAFI-------EETTEQ 110
Query: 113 FL-----VNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGG 167
F VN AP + + L L+ S I+N+SS I +
Sbjct: 111 FFDRMVSVNAKAPFFIIQQALSRLRDNSR-------------IINISSAATRI---SLPD 154
Query: 168 FHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQF 227
F Y +K A+N T +L+ L I A+ PG++KTDM + A I
Sbjct: 155 FIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSDPMMKQYATTISA 214
Query: 228 IQSLGEAHN 236
LGE +
Sbjct: 215 FNRLGEVED 223
|
Length = 252 |
| >gnl|CDD|236116 PRK07856, PRK07856, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 48.4 bits (116), Expect = 7e-07
Identities = 54/207 (26%), Positives = 84/207 (40%), Gaps = 31/207 (14%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
+ +L+TG RG+G G+ + + G A + R + V+ D
Sbjct: 7 RVVLVTGGTRGIGAGIARAFLAAG----ATVVVCGRRAPETVDGRPA-------EFHAAD 55
Query: 62 VTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAP 120
V D Q L I V+ G L+VLVNNAG + + P +N+ AP
Sbjct: 56 VRD-PDQVAALVDAI---VERHGRLDVLVNNAG-GSPYALAAEASPRFHEKIVELNLLAP 110
Query: 121 LMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNA 180
L++ A AN+ +IVN+ S+ G G Y +KA L
Sbjct: 111 LLV----------AQAANAVMQQQPGGGSIVNIGSVSGR---RPSPGTAAYGAAKAGLLN 157
Query: 181 ATRSLSIDLKGDKIIATAMHPGWVKTD 207
TRSL+++ K+ A+ G V+T+
Sbjct: 158 LTRSLAVEW-APKVRVNAVVVGLVRTE 183
|
Length = 252 |
| >gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 48.5 bits (116), Expect = 7e-07
Identities = 54/218 (24%), Positives = 88/218 (40%), Gaps = 43/218 (19%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K+ LITG RG+G + L G V + LA+ NL + +
Sbjct: 8 KNALITGAGRGIGRAVAIALAKEG-----------------VNVGLLARTEENLKAVAEE 50
Query: 62 VTDFSKQQDVLFKDISDV---------VKDQ--GLNVLVNNAGIAAKFTRLGLLKPEQMT 110
V + + + D+SD +K++ +++L+NNAGI+ KF + L P +
Sbjct: 51 VEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSIDILINNAGIS-KFGKFLELDPAEWE 109
Query: 111 DHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHP 170
VN+ T+ +LP + + + I+N+SS G
Sbjct: 110 KIIQVNLMGVYYATRAVLPSMIERQSGD-----------IINISSTAG---QKGAAVTSA 155
Query: 171 YRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
Y SK + T SL +++ I TA+ P V TDM
Sbjct: 156 YSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDM 193
|
Length = 239 |
| >gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 48.5 bits (116), Expect = 8e-07
Identities = 40/123 (32%), Positives = 55/123 (44%), Gaps = 16/123 (13%)
Query: 84 GLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPL 143
L++LVNNA L + EQ+ F N+ + +TK LP LK+ S
Sbjct: 124 RLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGS-------- 175
Query: 144 GSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGW 203
AI+N SI G E N Y +K A++A TRSL+ L I A+ PG
Sbjct: 176 -----AIINTGSITG-YEGNET--LIDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGP 227
Query: 204 VKT 206
+ T
Sbjct: 228 IWT 230
|
Length = 290 |
| >gnl|CDD|187668 cd09808, DHRS-12_like_SDR_c-like, human dehydrogenase/reductase SDR family member (DHRS)-12/FLJ13639-like, classical (c)-like SDRs | Back alignment and domain information |
|---|
Score = 48.4 bits (115), Expect = 8e-07
Identities = 57/216 (26%), Positives = 88/216 (40%), Gaps = 32/216 (14%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
+S LITG N G+G + G + CRN+ +A E + S I L
Sbjct: 2 RSFLITGANSGIGKAAALAIAKRGGT----VHMVCRNQTRAEEARKEIETESGNQNIFLH 57
Query: 62 VTDFSKQQDVLFKDISDVVKD-----QGLNVLVNNAGIAA---KFTRLGLLKPEQMTDHF 113
+ D S K + + V++ + L+VL+NNAG + T GL K +F
Sbjct: 58 IVDMSDP-----KQVWEFVEEFKEEGKKLHVLINNAGCMVNKRELTEDGLEK------NF 106
Query: 114 LVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIV---NVSSIMGSIEDNTQGGFHP 170
N +LT ++P+L+K E + SS +V N +++ E G
Sbjct: 107 ATNTLGTYILTTHLIPVLEK--EEDPRVITVSSGGMLVQKLNTNNL--QSERTAFDGTMV 162
Query: 171 YRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKT 206
Y +K T + K +I + MHPGW T
Sbjct: 163 YAQNKRQQVIMTEQWA--KKHPEIHFSVMHPGWADT 196
|
Classical SDR-like subgroup containing human DHRS-12/FLJ13639, the 36K protein of zebrafish CNS myelin, and related proteins. DHRS-12/FLJ13639 is expressed in neurons and oligodendrocytes in the human cerebral cortex. Proteins in this subgroup share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 255 |
| >gnl|CDD|166421 PLN02780, PLN02780, ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Score = 48.3 bits (115), Expect = 1e-06
Identities = 52/207 (25%), Positives = 93/207 (44%), Gaps = 21/207 (10%)
Query: 5 LITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELL-ALAQQHSNLHVIELDVT 63
L+TG G+G G L G N + RN DK ++ ++ ++S + + V
Sbjct: 57 LVTGPTDGIGKGFAFQLARKGLN----LVLVARNPDKLKDVSDSIQSKYSKTQIKTV-VV 111
Query: 64 DFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFL-VNVTAPLM 122
DFS D K I + ++ + VL+NN G++ + R E++ + + VNV
Sbjct: 112 DFSGDIDEGVKRIKETIEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTK 171
Query: 123 LTKTMLP-LLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNAA 181
+T+ +LP +LK+ + AI+N+ S +I + + Y +KA ++
Sbjct: 172 VTQAVLPGMLKR------------KKGAIINIGS-GAAIVIPSDPLYAVYAATKAYIDQF 218
Query: 182 TRSLSIDLKGDKIIATAMHPGWVKTDM 208
+R L ++ K I P +V T M
Sbjct: 219 SRCLYVEYKKSGIDVQCQVPLYVATKM 245
|
Length = 320 |
| >gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 48.1 bits (115), Expect = 1e-06
Identities = 42/159 (26%), Positives = 69/159 (43%), Gaps = 24/159 (15%)
Query: 56 HVIELDVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAA--KFTRLGLLKPEQMTDHF 113
DV D+S Q L + K G++V+VNNAG+A+ F L L +
Sbjct: 52 FYQRCDVRDYS-QLTALAQAC--EEKWGGIDVIVNNAGVASGGFFEELSLEDWDWQIA-- 106
Query: 114 LVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQG-GFHPYR 172
+N+ + K LPL K+ IVN++S+ G QG Y
Sbjct: 107 -INLMGVVKGCKAFLPLFKR-----------QKSGRIVNIASMAGL----MQGPAMSSYN 150
Query: 173 CSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS 211
+KA + A + +L ++L D+I + P + +T++ S
Sbjct: 151 VAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDS 189
|
Length = 270 |
| >gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR | Back alignment and domain information |
|---|
Score = 47.9 bits (114), Expect = 1e-06
Identities = 55/216 (25%), Positives = 87/216 (40%), Gaps = 37/216 (17%)
Query: 5 LITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDK-AVELLALAQQHSNLHVIELDVT 63
L+TG G+GL + + L G +F R ++ A + L + DV
Sbjct: 7 LVTGATSGIGLAIARRLGKEG----LRVFVCARGEEGLATTVKELREAGVEADGRTCDVR 62
Query: 64 DFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFL-----VNV 117
+ + L ++ V G ++VLVNNAG R G ++ D N+
Sbjct: 63 S-VPEIEAL---VAAAVARYGPIDVLVNNAG------RSGGGATAELADELWLDVVETNL 112
Query: 118 TAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFH--PYRCSK 175
T +TK +L + L I+N++S G QG H PY SK
Sbjct: 113 TGVFRVTKEVL---------KAGGMLERGTGRIINIASTGGK-----QGVVHAAPYSASK 158
Query: 176 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS 211
+ T++L ++L I A+ PG+V+T M S
Sbjct: 159 HGVVGFTKALGLELARTGITVNAVCPGFVETPMAAS 194
|
Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258 |
| >gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Score = 47.7 bits (113), Expect = 1e-06
Identities = 53/213 (24%), Positives = 101/213 (47%), Gaps = 32/213 (15%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA--LAQQHSNLHVIE 59
K ++TG +G+G + L G A + + +A E L L ++ +++ ++
Sbjct: 7 KVAIVTGGAKGIGKAITVALAQEG----AKVVINYNSSKEAAENLVNELGKEGHDVYAVQ 62
Query: 60 LDVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAA--KFTRLGLLKPEQMTDHFLVNV 117
DV+ ++ + ++ K +++LVNNAGI F +L E++ D VN+
Sbjct: 63 ADVSKVEDANRLVEEAVNHFGK---VDILVNNAGITRDRTFKKLNREDWERVID---VNL 116
Query: 118 TAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHP--YRCSK 175
++ T +LP + +A E I+++SSI+G GGF Y +K
Sbjct: 117 SSVFNTTSAVLPYITEAEEGR-----------IISISSIIGQ-----AGGFGQTNYSAAK 160
Query: 176 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
A + T+SL+++L + A+ PG++ T+M
Sbjct: 161 AGMLGFTKSLALELAKTNVTVNAICPGFIDTEM 193
|
Length = 247 |
| >gnl|CDD|235816 PRK06500, PRK06500, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 47.6 bits (114), Expect = 1e-06
Identities = 68/242 (28%), Positives = 99/242 (40%), Gaps = 54/242 (22%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K+ LITG G+GL + + G A + T R+ A A+ + VI D
Sbjct: 7 KTALITGGTSGIGLETARQFLAEG----ARVAITGRDPASLEA--ARAELGESALVIRAD 60
Query: 62 VTDFSKQQDVLFKDISDVVKDQG--LNVLVNNAGIAAKFTRLGLLKP-----EQMTDH-F 113
D + Q K ++ + + L+ + NAG+A P E M D F
Sbjct: 61 AGDVAAQ-----KALAQALAEAFGRLDAVFINAGVA-------KFAPLEDWDEAMFDRSF 108
Query: 114 LVNVTAPLMLTKTMLPLLKKASEANSAAPL--GSSRAAI-VNVSSIMGSIEDNTQGGFHP 170
NV P L + +LPLL AN A+ + GS A I + SS+
Sbjct: 109 NTNVKGPYFLIQALLPLL-----ANPASIVLNGSINAHIGMPNSSV-------------- 149
Query: 171 YRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTD----MGGSNAPLEVGAATAGIIQ 226
Y SKAAL + ++LS +L I A+ PG V+T +G A L+ A A I
Sbjct: 150 YAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLD--AVAAQIQA 207
Query: 227 FI 228
+
Sbjct: 208 LV 209
|
Length = 249 |
| >gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 47.2 bits (113), Expect = 2e-06
Identities = 52/215 (24%), Positives = 79/215 (36%), Gaps = 46/215 (21%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K++ +TG +G+G + V G A + + L Q+ LD
Sbjct: 9 KTVWVTGAAQGIGYAVALAFVEAG----AKVIGFDQA--------FLTQEDYPFATFVLD 56
Query: 62 VTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGL---LKPEQMTDHFLVNV 117
V+D + V ++ + G L+VLVN AGI R+G L E F VN
Sbjct: 57 VSDAAAVAQV----CQRLLAETGPLDVLVNAAGI----LRMGATDSLSDEDWQQTFAVNA 108
Query: 118 TAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQG----GFHPYRC 173
L + ++P + AIV V S N G Y
Sbjct: 109 GGAFNLFRAVMPQFR-----------RQRSGAIVTVGS-------NAAHVPRIGMAAYGA 150
Query: 174 SKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
SKAAL + + + ++L + + PG TDM
Sbjct: 151 SKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDM 185
|
Length = 252 |
| >gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 47.4 bits (113), Expect = 2e-06
Identities = 49/213 (23%), Positives = 82/213 (38%), Gaps = 35/213 (16%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRN---KDKAVELLALAQQHSNLHVI 58
K L+TG +G+G + + G A + + ++A +A + + +
Sbjct: 8 KVALVTGAAQGIGAAIARAFAREG----AAVALADLDAALAERAAAAIARDVAGARVLAV 63
Query: 59 ELDVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDH-----F 113
DVTD + + L+VLVNNAGI P MTD F
Sbjct: 64 PADVTDAASVAAAVAAAEEAF---GPLDVLVNNAGINV------FADPLAMTDEDWRRCF 114
Query: 114 LVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRC 173
V++ + +LP + + R +IVN++S G PY
Sbjct: 115 AVDLDGAWNGCRAVLPGM-----------VERGRGSIVNIASTHAF---KIIPGCFPYPV 160
Query: 174 SKAALNAATRSLSIDLKGDKIIATAMHPGWVKT 206
+K L TR+L I+ + A+ PG+++T
Sbjct: 161 AKHGLLGLTRALGIEYAARNVRVNAIAPGYIET 193
|
Length = 260 |
| >gnl|CDD|237189 PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 47.4 bits (113), Expect = 2e-06
Identities = 55/222 (24%), Positives = 93/222 (41%), Gaps = 40/222 (18%)
Query: 1 MKSILITGCNR--GLGLGMIKVLVGLGNNQPAHIFAT-----------CRNKDKAVELLA 47
K L+TG +R G+G + + L G IF T + + V L
Sbjct: 5 KKIALVTGASRLNGIGAAVCRRLAAKG----IDIFFTYWSPYDKTMPWGMHDKEPVLLKE 60
Query: 48 -LAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKP 106
+ +E+D++ + +F +S+ + D ++L+NNA + TRL L
Sbjct: 61 EIESYGVRCEHMEIDLSQ-PYAPNRVFYAVSERLGD--PSILINNAAYSTH-TRLEELTA 116
Query: 107 EQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSS--IMGSIEDNT 164
EQ+ H+ VNV A ++L+ A R I+N++S +G + D
Sbjct: 117 EQLDKHYAVNVRATMLLSSAF---------AKQYDGKAGGR--IINLTSGQSLGPMPDEL 165
Query: 165 QGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKT 206
Y +K A+ A T+SL+ +L I A++PG T
Sbjct: 166 -----AYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDT 202
|
Length = 256 |
| >gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 47.9 bits (115), Expect = 2e-06
Identities = 50/200 (25%), Positives = 81/200 (40%), Gaps = 21/200 (10%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K L+TG G+G K L G A + +++ A A + D
Sbjct: 423 KVALVTGAAGGIGKATAKRLAAEG----ACVVLADLDEEAAEAAAAELGGPDRALGVACD 478
Query: 62 VTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPL 121
VTD + Q F++ + G++++V+NAGIA + E F VN T
Sbjct: 479 VTDEAAVQAA-FEEA--ALAFGGVDIVVSNAGIAIS-GPIEETSDEDWRRSFDVNATGHF 534
Query: 122 MLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNAA 181
++ + + ++K A LG S IV ++S N F Y +KAA
Sbjct: 535 LVAREAVRIMK-------AQGLGGS---IVFIASKNAV---NPGPNFGAYGAAKAAELHL 581
Query: 182 TRSLSIDLKGDKIIATAMHP 201
R L+++L D I ++P
Sbjct: 582 VRQLALELGPDGIRVNGVNP 601
|
Length = 681 |
| >gnl|CDD|235608 PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 47.1 bits (112), Expect = 2e-06
Identities = 46/208 (22%), Positives = 78/208 (37%), Gaps = 29/208 (13%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K + I G + GLG + + + A + RN++K + ++ N+H +
Sbjct: 6 KKVAIIGVSEGLGYAVAYFAL----KEGAQVCINSRNENKLKRMKKTLSKYGNIHYV--- 58
Query: 62 VTDFSKQQDVLFKDISDVVKD--QGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTA 119
V D S + +++ + ++ LV G + T E+M + ++
Sbjct: 59 VGDVSSTESA--RNVIEKAAKVLNAIDGLVVTVGGYVEDTVEEFSGLEEMLTN---HIKI 113
Query: 120 PLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALN 179
PL L LK+ GSS IV VSS+ G Y +KA L
Sbjct: 114 PLYAVNASLRFLKE----------GSS---IVLVSSMSGI--YKASPDQLSYAVAKAGLA 158
Query: 180 AATRSLSIDLKGDKIIATAMHPGWVKTD 207
A L+ +L G I + P + D
Sbjct: 159 KAVEILASELLGRGIRVNGIAPTTISGD 186
|
Length = 238 |
| >gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 47.0 bits (112), Expect = 2e-06
Identities = 48/208 (23%), Positives = 88/208 (42%), Gaps = 23/208 (11%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K L+TG + G+G + L G N + + +D A E++ ++ + +
Sbjct: 4 KVALVTGASSGIGKAIAIRLATAGANVVVNYRS---KEDAAEEVV---EEIKAVGGKAIA 57
Query: 62 V-TDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTA 119
V D SK++DV+ +K+ G L++LVNNAG+ + + E VN+T
Sbjct: 58 VQADVSKEEDVV-ALFQSAIKEFGTLDILVNNAGLQGDAS-SHEMTLEDWNKVIDVNLTG 115
Query: 120 PLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALN 179
+ + + +K+ + I+N+SS+ I G Y SK +
Sbjct: 116 QFLCAREAIKRFRKSK----------IKGKIINMSSVHEKI---PWPGHVNYAASKGGVK 162
Query: 180 AATRSLSIDLKGDKIIATAMHPGWVKTD 207
T++L+ + I A+ PG + T
Sbjct: 163 MMTKTLAQEYAPKGIRVNAIAPGAINTP 190
|
GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253 |
| >gnl|CDD|182531 PRK10538, PRK10538, malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Score = 46.3 bits (110), Expect = 4e-06
Identities = 53/210 (25%), Positives = 94/210 (44%), Gaps = 41/210 (19%)
Query: 4 ILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVT 63
+L+TG G G + + + G + AT R +++ EL + NL++ +LDV
Sbjct: 3 VLVTGATAGFGECITRRFIQQG----HKVIATGRRQERLQELKD--ELGDNLYIAQLDVR 56
Query: 64 DFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKP---------EQMTDHFL 114
+ + +++L + ++ ++VLVNNAG+A LG L+P E M D
Sbjct: 57 NRAAIEEML-ASLPAEWRN--IDVLVNNAGLA-----LG-LEPAHKASVEDWETMID--- 104
Query: 115 VNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCS 174
N + +T+ +LP + + + I+N+ S GS G + Y +
Sbjct: 105 TNNKGLVYMTRAVLPGMVER-----------NHGHIINIGSTAGSW---PYAGGNVYGAT 150
Query: 175 KAALNAATRSLSIDLKGDKIIATAMHPGWV 204
KA + + +L DL G + T + PG V
Sbjct: 151 KAFVRQFSLNLRTDLHGTAVRVTDIEPGLV 180
|
Length = 248 |
| >gnl|CDD|180823 PRK07074, PRK07074, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 46.3 bits (110), Expect = 5e-06
Identities = 54/209 (25%), Positives = 89/209 (42%), Gaps = 29/209 (13%)
Query: 1 MKSI-LITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIE 59
K L+TG G+G + + + G+ + A + A+ A A + +
Sbjct: 1 TKRTALVTGAAGGIGQALARRFLAAGD----RVLALDIDAA-ALAAFADALGDARFVPVA 55
Query: 60 LDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVT 118
D+TD L +++ ++G ++VLV NAG AA+ L P +N+
Sbjct: 56 CDLTD----AASLAAALANAAAERGPVDVLVANAG-AARAASLHDTTPASWRADNALNLE 110
Query: 119 APLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHP-YRCSKAA 177
A + + +L + K S R A+VN+ S+ G G HP Y +KA
Sbjct: 111 AAYLCVEAVLEGMLKRS-----------RGAVVNIGSVNGM---AALG--HPAYSAAKAG 154
Query: 178 LNAATRSLSIDLKGDKIIATAMHPGWVKT 206
L T+ L+++ I A A+ PG VKT
Sbjct: 155 LIHYTKLLAVEYGRFGIRANAVAPGTVKT 183
|
Length = 257 |
| >gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 45.8 bits (109), Expect = 5e-06
Identities = 56/214 (26%), Positives = 91/214 (42%), Gaps = 40/214 (18%)
Query: 5 LITGCNRGLGLGMIKVLVGLGNNQPAHIFATCR-NKDKAVELLA-LAQQHSNLHVIELDV 62
L+TG +RG+G + L G A + R +KD A E+ A + + V+ DV
Sbjct: 2 LVTGGSRGIGKAIALRLAERG----ADVVINYRKSKDAAAEVAAEIEELGGKAVVVRADV 57
Query: 63 TDFSKQQDVLFKDISDVVKDQ--GLNVLVNNAGIAAKFTRLGLLKP--EQMTDHFL---- 114
+ QDV +++ VK++ L+VLV+NA G +P E H+
Sbjct: 58 SQ---PQDV--EEMFAAVKERFGRLDVLVSNAAA-------GAFRPLSELTPAHWDAKMN 105
Query: 115 VNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCS 174
N+ A + + L+++ IV +SS +GS + +
Sbjct: 106 TNLKALVHCAQQAAKLMRERGGG-----------RIVAISS-LGS--IRALPNYLAVGTA 151
Query: 175 KAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
KAAL A R L+++L I A+ PG + TD
Sbjct: 152 KAALEALVRYLAVELGPRGIRVNAVSPGVIDTDA 185
|
This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242 |
| >gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated | Back alignment and domain information |
|---|
Score = 45.5 bits (108), Expect = 7e-06
Identities = 59/213 (27%), Positives = 90/213 (42%), Gaps = 30/213 (14%)
Query: 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATC---RNKDKAVELLA-LAQQHSNLH 56
K L+TG +G+G + K LV G F N++ A L++
Sbjct: 2 SKVALVTGAGQGIGFAIAKRLVEDG-------FKVAIVDYNEETAQAAADKLSKDGGKAI 54
Query: 57 VIELDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLV 115
++ DV+D +D +F + VV G LNV+VNNAG+A T + + EQ + +
Sbjct: 55 AVKADVSD----RDQVFAAVRQVVDTFGDLNVVVNNAGVAPT-TPIETITEEQFDKVYNI 109
Query: 116 NVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSK 175
NV + + KK LG I+N +S G + N Y +K
Sbjct: 110 NVGGVIWGIQAAQEAFKK---------LGHG-GKIINATSQAG-VVGNP--ELAVYSSTK 156
Query: 176 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
A+ T++ + DL + I A PG VKT M
Sbjct: 157 FAVRGLTQTAARDLASEGITVNAYAPGIVKTPM 189
|
Length = 256 |
| >gnl|CDD|180771 PRK06947, PRK06947, glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 45.6 bits (108), Expect = 7e-06
Identities = 60/221 (27%), Positives = 93/221 (42%), Gaps = 35/221 (15%)
Query: 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQH-SNLHVIE 59
K +LITG +RG+G + G + + R+ A E + V+
Sbjct: 2 RKVVLITGASRGIGRATAVLAAARGWSVGINY---ARDAAAAEETADAVRAAGGRACVVA 58
Query: 60 LDVTDFSKQQDVLFKDISDVVKDQ--GLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNV 117
DV + + DV+ + D V+ L+ LVNNAGI A L + ++ F NV
Sbjct: 59 GDV---ANEADVI--AMFDAVQSAFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNV 113
Query: 118 TAPLMLTKTMLPLLKKASEANSAAPLGSSRA----AIVNVSSI---MGSIEDNTQGGFHP 170
+ A EA A L + R AIVNVSSI +GS + +
Sbjct: 114 LGAYLC----------AREA--ARRLSTDRGGRGGAIVNVSSIASRLGSPNE-----YVD 156
Query: 171 YRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS 211
Y SK A++ T L+ +L + A+ PG ++T++ S
Sbjct: 157 YAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHAS 197
|
Length = 248 |
| >gnl|CDD|187664 cd09763, DHRS1-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) -like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 45.5 bits (108), Expect = 9e-06
Identities = 55/221 (24%), Positives = 90/221 (40%), Gaps = 41/221 (18%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K L+TG +RG+G G+ L G A ++ T R + A + I +
Sbjct: 4 KIALVTGASRGIGRGIALQLGEAG----ATVYITGRTILPQLPGTAEEIEARGGKCIPV- 58
Query: 62 VTDFSKQQDV--LFKDISDVVKDQG-LNVLVNNA---------GIAAKFTRLGLLKPEQM 109
D S +V LF+ ++ + QG L++LVNNA G+A F P
Sbjct: 59 RCDHSDDDEVEALFERVAR--EQQGRLDILVNNAYAAVQLILVGVAKPFWEE---PPTIW 113
Query: 110 TDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFH 169
D V + A + PL+ KA + IV +SS G +E
Sbjct: 114 DDINNVGLRAHYACSVYAAPLMVKAG-----------KGLIVIISS-TGGLE-----YLF 156
Query: 170 --PYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
Y KAA++ ++ +LK + ++ PG+V+T++
Sbjct: 157 NVAYGVGKAAIDRMAADMAHELKPHGVAVVSLWPGFVRTEL 197
|
This subgroup includes human DHRS1 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 265 |
| >gnl|CDD|180300 PRK05875, PRK05875, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 45.6 bits (108), Expect = 9e-06
Identities = 53/211 (25%), Positives = 88/211 (41%), Gaps = 26/211 (12%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDK---AVELLALAQQHSNLHVI 58
++ L+TG G+G G+ LV G A + RN DK A E + + +
Sbjct: 8 RTYLVTGGGSGIGKGVAAGLVAAG----AAVMIVGRNPDKLAAAAEEIEALKGAGAVRYE 63
Query: 59 ELDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNV 117
DVTD +D + + + G L+ +V+ AG + + P D
Sbjct: 64 PADVTD----EDQVARAVDAATAWHGRLHGVVHCAGGSET------IGPITQIDSDAWRR 113
Query: 118 TAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAA 177
T L + TM +LK A+ GS V +SSI S NT F Y +K+A
Sbjct: 114 TVDLNVNGTMY-VLKHAARELVRGGGGS----FVGISSIAAS---NTHRWFGAYGVTKSA 165
Query: 178 LNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
++ + + +L + ++ PG ++TD+
Sbjct: 166 VDHLMKLAADELGPSWVRVNSIRPGLIRTDL 196
|
Length = 276 |
| >gnl|CDD|236094 PRK07774, PRK07774, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 45.1 bits (107), Expect = 1e-05
Identities = 40/144 (27%), Positives = 58/144 (40%), Gaps = 20/144 (13%)
Query: 84 GLNVLVNNAGIAAKFTRLGLLK-PEQMTDHFL-VNVTAPLMLTKTMLPLLKKASEANSAA 141
G++ LVNNA I L+ P F+ VN+ L+ T+ + + K
Sbjct: 83 GIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGG---- 138
Query: 142 PLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHP 201
AIVN SS + N Y +K LN T+ L+ +L G I A+ P
Sbjct: 139 -------AIVNQSSTAAWLYSN------FYGLAKVGLNGLTQQLARELGGMNIRVNAIAP 185
Query: 202 GWVKTDMGGSNAPLE-VGAATAGI 224
G + T+ + P E V GI
Sbjct: 186 GPIDTEATRTVTPKEFVADMVKGI 209
|
Length = 250 |
| >gnl|CDD|236207 PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 45.6 bits (109), Expect = 1e-05
Identities = 42/130 (32%), Positives = 60/130 (46%), Gaps = 25/130 (19%)
Query: 84 GLNVLVNNAGIAAKFTRLGLLKPEQMTDHFL-----VNVTAPLMLTKTMLPLLKKASEAN 138
GL+++V+NAGI TR L M + VN+ APL +T+ +L A+ A
Sbjct: 284 GLDIVVHNAGI----TRDKTLA--NMDEARWDSVLAVNLLAPLRITEALL-----AAGAL 332
Query: 139 SAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATA 198
IV VSSI G I N G Y SKA + ++L+ L I A
Sbjct: 333 GDGG------RIVGVSSISG-IAGNR--GQTNYAASKAGVIGLVQALAPLLAERGITINA 383
Query: 199 MHPGWVKTDM 208
+ PG+++T M
Sbjct: 384 VAPGFIETQM 393
|
Length = 450 |
| >gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 44.6 bits (106), Expect = 2e-05
Identities = 58/217 (26%), Positives = 92/217 (42%), Gaps = 44/217 (20%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKD--KAVELLALAQQHSN----L 55
K L+TG +RG+G + K+L Q AH+ + R D +AV +A
Sbjct: 9 KIALVTGASRGIGEAIAKLLA----QQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALAC 64
Query: 56 HVIELDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKF-----TRLGLLKPEQM 109
H+ E++ Q D LF I + G L++LVNNA F T LG ++
Sbjct: 65 HIGEME------QIDALFAHIR---ERHGRLDILVNNAAANPYFGHILDTDLGAF--QKT 113
Query: 110 TDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFH 169
D VN+ ++ L+K+ +IVNV+S+ G + QG
Sbjct: 114 VD---VNIRGYFFMSVEAGKLMKE-----------QGGGSIVNVASVNGVSPGDFQG--- 156
Query: 170 PYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKT 206
Y +KAA+ + T++ + + I A+ PG T
Sbjct: 157 IYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDT 193
|
Length = 252 |
| >gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 44.2 bits (105), Expect = 2e-05
Identities = 51/239 (21%), Positives = 83/239 (34%), Gaps = 28/239 (11%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
++TG GLGL ++ L+ G A + + L N + +D
Sbjct: 3 LVAVVTGGASGLGLATVERLLAQG----AKVVILDLPNSPGETVAKLG---DNCRFVPVD 55
Query: 62 VTDFSKQQDVLFKDISDVVKDQG--LNVLVNNAGIAAKFTRLGLLK-----PEQMTDHFL 114
VT + L + K + L+++VN AGIA E
Sbjct: 56 VTSEKDVKAAL-----ALAKAKFGRLDIVVNCAGIAVAAKTYNKKGQQPHSLELFQRVIN 110
Query: 115 VNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCS 174
VN+ + + + K +E + G R I+N +S+ Q G Y S
Sbjct: 111 VNLIGTFNVIRLAAGAMGK-NEPDQ----GGERGVIINTASVAAF---EGQIGQAAYSAS 162
Query: 175 KAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQSLGE 233
K + T ++ DL I + PG T + P +V A + F LG+
Sbjct: 163 KGGIVGMTLPIARDLAPQGIRVVTIAPGLFDTPLLAGL-PEKVRDFLAKQVPFPSRLGD 220
|
HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252 |
| >gnl|CDD|130890 TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Score = 44.1 bits (104), Expect = 2e-05
Identities = 54/212 (25%), Positives = 89/212 (41%), Gaps = 33/212 (15%)
Query: 4 ILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVE--LLALAQQHSNLHVIELD 61
+L+TG +RG+G + L G H + E + A+ Q N +++ D
Sbjct: 1 VLVTGASRGIGRAIANRLAADGFEICVH----YHSGRSDAESVVSAIQAQGGNARLLQFD 56
Query: 62 VTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIA--AKFTRLGLLKPEQMTDHFL---VN 116
V D + +L DI++ G +V NAGI A F L + + L N
Sbjct: 57 VADRVACRTLLEADIAEHGAYYG---VVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYN 113
Query: 117 VTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKA 176
V P +P+++ A G + +VS +MG+ G Y +KA
Sbjct: 114 VIHPC-----TMPMIR--------ARQGGRIITLASVSGVMGN------RGQVNYSAAKA 154
Query: 177 ALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
L AT++L+++L KI + PG + T+M
Sbjct: 155 GLIGATKALAVELAKRKITVNCIAPGLIDTEM 186
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239 |
| >gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 43.5 bits (103), Expect = 4e-05
Identities = 48/216 (22%), Positives = 81/216 (37%), Gaps = 39/216 (18%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVE-----LLALAQQHSNL- 55
K +TG +RG+G + L G A + + + L ++ +
Sbjct: 4 KVAFVTGASRGIGRAIALRLAKAG----ATVVVAAKTASEGDNGSAKSLPGTIEETAEEI 59
Query: 56 -------HVIELDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPE 107
I +DV D Q L + V G L++LVNNAG A + L P
Sbjct: 60 EAAGGQALPIVVDVRDED-QVRALVEA---TVDQFGRLDILVNNAG--AIWLSLVEDTPA 113
Query: 108 QMTDHFL-VNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQG 166
+ D VN+ +L++ LP + KA + + I+N+S +
Sbjct: 114 KRFDLMQRVNLRGTYLLSQAALPHMVKAGQGH-----------ILNISPPLSL---RPAR 159
Query: 167 GFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPG 202
G Y KA ++ T L+ +L+ I ++ P
Sbjct: 160 GDVAYAAGKAGMSRLTLGLAAELRRHGIAVNSLWPS 195
|
This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246 |
| >gnl|CDD|180604 PRK06523, PRK06523, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 43.4 bits (103), Expect = 4e-05
Identities = 51/235 (21%), Positives = 95/235 (40%), Gaps = 53/235 (22%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K L+TG +G+G + L+ G A + T R+ + + D
Sbjct: 10 KRALVTGGTKGIGAATVARLLEAG----ARVVTTARS--------RPDDLPEGVEFVAAD 57
Query: 62 VTDFSKQQDVLFKDISDVVKDQ--GLNVLVNNAG--------IAAKFTRLGLLKPEQMTD 111
+T + ++ V ++ G+++LV+ G AA L E+ D
Sbjct: 58 LT---TAEGC--AAVARAVLERLGGVDILVHVLGGSSAPAGGFAA-------LTDEEWQD 105
Query: 112 HFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPY 171
+N+ A + L + +LP + + I++V+SI + Y
Sbjct: 106 ELNLNLLAAVRLDRALLPGM-----------IARGSGVIIHVTSIQRRLP--LPESTTAY 152
Query: 172 RCSKAALNAATRSLSIDL--KGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGI 224
+KAAL+ ++SLS ++ KG ++ + PGW++T+ + A E A AG
Sbjct: 153 AAAKAALSTYSKSLSKEVAPKGVRVNTVS--PGWIETE--AAVALAERLAEAAGT 203
|
Length = 260 |
| >gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 42.8 bits (101), Expect = 6e-05
Identities = 57/234 (24%), Positives = 95/234 (40%), Gaps = 39/234 (16%)
Query: 4 ILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVT 63
+++TG +G+G + + L+ G A + A D LL L + LDV
Sbjct: 1 VIVTGAAQGIGRAVARHLLQAG----ATVIAL----DLPFVLLLEYGDP--LRLTPLDVA 50
Query: 64 DFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKP---EQMTDHFLVNVTAP 120
D + ++V + +++ ++ LVN AG+ R G P E F VNVT
Sbjct: 51 DAAAVREVCSRLLAE---HGPIDALVNCAGV----LRPGATDPLSTEDWEQTFAVNVTGV 103
Query: 121 LMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNA 180
L + + P +K + + S+ A + +S M + Y SKAAL +
Sbjct: 104 FNLLQAVAPHMK-DRRTGAIVTVASNAAHVPRIS--MAA-----------YGASKAALAS 149
Query: 181 ATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQSLGEA 234
++ L ++L + + PG T M + E GAA Q I + E
Sbjct: 150 LSKCLGLELAPYGVRCNVVSPGSTDTAMQRTLWHDEDGAA-----QVIAGVPEQ 198
|
2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244 |
| >gnl|CDD|237187 PRK12743, PRK12743, oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 42.7 bits (101), Expect = 6e-05
Identities = 37/157 (23%), Positives = 68/157 (43%), Gaps = 21/157 (13%)
Query: 56 HVIELDVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAG--IAAKFTRLGLLKPEQMTDHF 113
+ +LD++D + L K I + ++VLVNNAG A F + ++ F
Sbjct: 55 EIRQLDLSDLPEGAQALDKLIQRL---GRIDVLVNNAGAMTKAPFLDMDF---DEWRKIF 108
Query: 114 LVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRC 173
V+V + ++ + K + I+N++S+ E G Y
Sbjct: 109 TVDVDGAFLCSQIAARHMVKQGQGGR----------IINITSVH---EHTPLPGASAYTA 155
Query: 174 SKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGG 210
+K AL T++++++L I+ A+ PG + T M G
Sbjct: 156 AKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNG 192
|
Length = 256 |
| >gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 42.6 bits (101), Expect = 7e-05
Identities = 58/217 (26%), Positives = 94/217 (43%), Gaps = 36/217 (16%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIEL 60
K+ L+TG +RGLGL + + L G A + + R ++ E A L + I
Sbjct: 13 KTALVTGGSRGLGLQIAEALGEAG----ARVVLSARKAEELEEAAAHLEALGIDALWIAA 68
Query: 61 DVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFL-VNVT 118
DV D + + + + ++ G +++LVNNAG A + P + D + +NV
Sbjct: 69 DVADEADIERL----AEETLERFGHVDILVNNAG--ATWGAPAEDHPVEAWDKVMNLNVR 122
Query: 119 APLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHP-------Y 171
+L++ + S P G R I+NV+S+ G GG P Y
Sbjct: 123 GLFLLSQAVAKR--------SMIPRGYGR--IINVASVAG------LGGNPPEVMDTIAY 166
Query: 172 RCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
SK A+ TR+L+ + I A+ PG+ T M
Sbjct: 167 NTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKM 203
|
Length = 259 |
| >gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 42.7 bits (101), Expect = 7e-05
Identities = 49/210 (23%), Positives = 82/210 (39%), Gaps = 29/210 (13%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K L+TG G+G + + + G A + +A + LD
Sbjct: 7 KVALLTGAASGIGEAVAERYLAEG----ARVVIADIKPARARLAALEIGPA--AIAVSLD 60
Query: 62 VTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLK-PEQMTDH-FLVNVT 118
VT QD + + ++ V+ G +++L NNA + F +L D F VNV
Sbjct: 61 VTR----QDSIDRIVAAAVERFGGIDILFNNAAL---FDMAPILDISRDSYDRLFAVNV- 112
Query: 119 APLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAAL 178
K + L++ + G I+N++S G + Y +KAA+
Sbjct: 113 ------KGLFFLMQAVARHMVEQGRG---GKIINMASQAGR---RGEALVSHYCATKAAV 160
Query: 179 NAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
+ T+S ++ L I A+ PG V T M
Sbjct: 161 ISYTQSAALALIRHGINVNAIAPGVVDTPM 190
|
Length = 257 |
| >gnl|CDD|235739 PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 42.2 bits (100), Expect = 9e-05
Identities = 57/215 (26%), Positives = 87/215 (40%), Gaps = 33/215 (15%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQH-SNLHVIEL 60
+ LITG G+G +++ + G A + R+ +K +L Q+ ++ V+E
Sbjct: 7 QVALITGGGSGIGRALVERFLAEG----ARVAVLERSAEKLA---SLRQRFGDHVLVVEG 59
Query: 61 DVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHF----LV 115
DVT ++ Q + + V G L+ V NAGI T L + E + F V
Sbjct: 60 DVTSYADNQ----RAVDQTVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNV 115
Query: 116 NVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSK 175
NV L+ K LP LK S +++ S GG Y SK
Sbjct: 116 NVKGYLLGAKAALPALKA------------SGGSMIFTLSNSSFY---PGGGGPLYTASK 160
Query: 176 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGG 210
A+ R L+ +L KI + PG TD+ G
Sbjct: 161 HAVVGLVRQLAYEL-APKIRVNGVAPGGTVTDLRG 194
|
Length = 263 |
| >gnl|CDD|180458 PRK06194, PRK06194, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 42.3 bits (100), Expect = 9e-05
Identities = 57/224 (25%), Positives = 93/224 (41%), Gaps = 41/224 (18%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNN-------QPAHIFATCRNKDKAVELLALAQQHSN 54
K +ITG G GL ++ LG Q A D+AV L Q +
Sbjct: 7 KVAVITGAASGFGLAFARIGAALGMKLVLADVQQDA--------LDRAVA--ELRAQGAE 56
Query: 55 LHVIELDVTDFSKQQDVLFKDISDVVKDQ--GLNVLVNNAGIAAKFTRLGLLKPEQMTDH 112
+ + DV+D + Q + L +D ++ +++L NNAG+ A GL+ + D
Sbjct: 57 VLGVRTDVSDAA-QVEAL----ADAALERFGAVHLLFNNAGVGAG----GLVWENSLADW 107
Query: 113 ---FLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFH 169
VN+ + + PL+ A A + IVN +S+ G + G
Sbjct: 108 EWVLGVNLWGVIHGVRAFTPLMLAA-----AEKDPAYEGHIVNTASMAGLLAPPAMG--- 159
Query: 170 PYRCSKAALNAATRSLSIDLK--GDKIIATAMHPGWVKTDMGGS 211
Y SK A+ + T +L DL D++ A+ + P +V T + S
Sbjct: 160 IYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQS 203
|
Length = 287 |
| >gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 42.0 bits (99), Expect = 1e-04
Identities = 30/130 (23%), Positives = 51/130 (39%), Gaps = 27/130 (20%)
Query: 84 GLNVLVNNAGIAAKFTRLGLLKPEQMTD-----HFLVNVTAPLMLTKTMLPLLKKASEAN 138
++VLVNNAG+ + L N+ ++ + L +
Sbjct: 83 RIDVLVNNAGV------MPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGR-- 134
Query: 139 SAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATA 198
I+N+S+ S+ G+ PY SKAA+ L+ +L+G I A
Sbjct: 135 -----------IINLST---SVIALPLPGYGPYAASKAAVEGLVHVLANELRGRGITVNA 180
Query: 199 MHPGWVKTDM 208
+ PG V T++
Sbjct: 181 VAPGPVATEL 190
|
Length = 245 |
| >gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 42.1 bits (99), Expect = 1e-04
Identities = 42/174 (24%), Positives = 65/174 (37%), Gaps = 17/174 (9%)
Query: 63 TDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGI-AAKFTRLGLLKPEQMTDHFLVNVTAP 120
D + + DV + V G L+++ NNAG+ A + E+ VNV
Sbjct: 58 CDVTVEADVR-AAVDTAVARFGRLDIMFNNAGVLGAPCYSILETSLEEFERVLDVNVYGA 116
Query: 121 LMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNA 180
+ TK A P +IV+V+S+ G + G H Y SK A+
Sbjct: 117 FLGTK---------HAARVMIPAKK--GSIVSVASVAGVV---GGLGPHAYTASKHAVLG 162
Query: 181 ATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQSLGEA 234
TRS + +L I + P V T + + +E A + G A
Sbjct: 163 LTRSAATELGEHGIRVNCVSPYGVATPLLTAGFGVEDEAIEEAVRGAANLKGTA 216
|
Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249 |
| >gnl|CDD|181517 PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 42.0 bits (99), Expect = 1e-04
Identities = 50/221 (22%), Positives = 90/221 (40%), Gaps = 26/221 (11%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
+++L+TG +RGLG + + G A + + A E LA + ++ D
Sbjct: 6 QTVLVTGGSRGLGAAIARAFAREG----ARVVVNYHQSEDAAEALA-DELGDRAIALQAD 60
Query: 62 VTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKF-----TRLGLLKPEQMTDHFLVN 116
VTD +Q +F ++ + + +VNNA F + + E +
Sbjct: 61 VTDR-EQVQAMFATATEHF-GKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGS 118
Query: 117 VTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKA 176
V L + LP +++ G R I+N+ + ++ N +H Y +KA
Sbjct: 119 VKGALNTIQAALPGMREQ---------GFGR--IINIGT---NLFQNPVVPYHDYTTAKA 164
Query: 177 ALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEV 217
AL TR+L+ +L I + G ++T + P EV
Sbjct: 165 ALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAATPDEV 205
|
Length = 253 |
| >gnl|CDD|235631 PRK05866, PRK05866, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 42.0 bits (99), Expect = 1e-04
Identities = 48/213 (22%), Positives = 88/213 (41%), Gaps = 30/213 (14%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIEL 60
K IL+TG + G+G + G A + A R +D + + + + +
Sbjct: 41 KRILLTGASSGIGEAAAEQFARRG----ATVVAVARREDLLDAVADRITRAGGDAMAVPC 96
Query: 61 DVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLK-----PEQMTDHFLV 115
D++D D L D+ + G+++L+NNAG + + L M +
Sbjct: 97 DLSDL-DAVDALVADVEK--RIGGVDILINNAGRSIRRPLAESLDRWHDVERTMV----L 149
Query: 116 NVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSK 175
N APL L + + P + + + + I+NV++ E + F Y SK
Sbjct: 150 NYYAPLRLIRGLAPGMLERGDGH-----------IINVATWGVLSEASPL--FSVYNASK 196
Query: 176 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
AAL+A +R + + + +T ++ V T M
Sbjct: 197 AALSAVSRVIETEWGDRGVHSTTLYYPLVATPM 229
|
Length = 293 |
| >gnl|CDD|180983 PRK07453, PRK07453, protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Score = 41.9 bits (99), Expect = 2e-04
Identities = 35/150 (23%), Positives = 59/150 (39%), Gaps = 32/150 (21%)
Query: 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL---LALAQQHSNLHV 57
+++ITG + G+GL K L G H+ CRN KA L + + +
Sbjct: 6 KGTVIITGASSGVGLYAAKALAKRG----WHVIMACRNLKKAEAAAQELGIPPD--SYTI 59
Query: 58 IELDVTDFSKQQDVLFKDISDVVKD-----QGLNVLVNNAGIAAKFTRLGLLK-PEQMTD 111
I +D+ D + V D + L+ LV NA + + LLK P +
Sbjct: 60 IHIDLGDLD--------SVRRFVDDFRALGKPLDALVCNAAV-----YMPLLKEPLRSPQ 106
Query: 112 HFLVNVT----APLMLTKTMLPLLKKASEA 137
+ +++ +L +L LKK+
Sbjct: 107 GYELSMATNHLGHFLLCNLLLEDLKKSPAP 136
|
Length = 322 |
| >gnl|CDD|233441 TIGR01500, sepiapter_red, sepiapterin reductase | Back alignment and domain information |
|---|
Score = 41.1 bits (96), Expect = 2e-04
Identities = 47/210 (22%), Positives = 92/210 (43%), Gaps = 18/210 (8%)
Query: 5 LITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTD 64
L+TG +RG G + + L + + + + RN + +L A + + D
Sbjct: 4 LVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLD 63
Query: 65 FSKQQDV--LFKDISDVVKDQGLN--VLVNNAGIAAKFTRL--GLLKPEQMTDHFLVNVT 118
+ + L K + ++ + +GL +L+NNAG ++ L Q+ +++ +N+T
Sbjct: 64 LGAEAGLEQLLKALRELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLT 123
Query: 119 APLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAAL 178
+ L LT ++L K +VN+SS + +I+ G+ Y KAA
Sbjct: 124 SMLCLTSSVLKAFKD---------SPGLNRTVVNISS-LCAIQPFK--GWALYCAGKAAR 171
Query: 179 NAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
+ + L+++ K + PG + TDM
Sbjct: 172 DMLFQVLALEEKNPNVRVLNYAPGVLDTDM 201
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. Length = 256 |
| >gnl|CDD|171820 PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Score = 41.1 bits (96), Expect = 2e-04
Identities = 35/134 (26%), Positives = 67/134 (50%), Gaps = 27/134 (20%)
Query: 83 QGLNVLVNNAGIAAKFTRLGLLKPEQMTDH-----FLVNVTAPLMLTKTML-PLLKKASE 136
+G+++LVNNAGI T+ GL +M+D VN+TA LT+ + P++++
Sbjct: 79 EGVDILVNNAGI----TKDGLFV--RMSDEDWDSVLEVNLTATFRLTRELTHPMMRR--- 129
Query: 137 ANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIA 196
I+N++S++G + Q Y SKA + ++SL+ ++ +
Sbjct: 130 ---------RYGRIINITSVVGVTGNPGQAN---YCASKAGMIGFSKSLAQEIATRNVTV 177
Query: 197 TAMHPGWVKTDMGG 210
+ PG++++ M G
Sbjct: 178 NCVAPGFIESAMTG 191
|
Length = 245 |
| >gnl|CDD|235703 PRK06125, PRK06125, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 40.8 bits (96), Expect = 3e-04
Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 17/96 (17%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K +LITG ++G+G + G H+ R+ D L ALA H +++
Sbjct: 8 KRVLITGASKGIGAAAAEAFAAEG----CHLHLVARDADA---LEALAADLRAAHGVDVA 60
Query: 62 VT--DFSKQQDV--LFKDISDVVKDQGLNVLVNNAG 93
V D S + L + D+ ++LVNNAG
Sbjct: 61 VHALDLSSPEAREQLAAEAGDI------DILVNNAG 90
|
Length = 259 |
| >gnl|CDD|180413 PRK06128, PRK06128, oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 41.0 bits (96), Expect = 3e-04
Identities = 37/146 (25%), Positives = 60/146 (41%), Gaps = 19/146 (13%)
Query: 61 DVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAP 120
D+ D + + ++ + + ++ GL++LVN AG + + EQ F NV A
Sbjct: 114 DLKDEAFCRQLVERAVKEL---GGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAM 170
Query: 121 LMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNA 180
L K +P L A+I+N SI Y +KAA+ A
Sbjct: 171 FWLCKAAIPHLPPG-------------ASIINTGSIQSY---QPSPTLLDYASTKAAIVA 214
Query: 181 ATRSLSIDLKGDKIIATAMHPGWVKT 206
T++L+ + I A+ PG V T
Sbjct: 215 FTKALAKQVAEKGIRVNAVAPGPVWT 240
|
Length = 300 |
| >gnl|CDD|236389 PRK09134, PRK09134, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 40.7 bits (96), Expect = 3e-04
Identities = 33/113 (29%), Positives = 47/113 (41%), Gaps = 31/113 (27%)
Query: 85 LNVLVNNAGI-----AAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANS 139
+ +LVNNA + AA FTR + H N+ AP +L + +
Sbjct: 88 ITLLVNNASLFEYDSAASFTRASWDR------HMATNLRAPFVLAQAF-----------A 130
Query: 140 AAPLGSSRAAIVNVSSIMGSIE---DNTQGGFHPYRCSKAALNAATRSLSIDL 189
A +R +VN+ I+ N F Y SKAAL ATR+L+ L
Sbjct: 131 RALPADARGLVVNM------IDQRVWNLNPDFLSYTLSKAALWTATRTLAQAL 177
|
Length = 258 |
| >gnl|CDD|180408 PRK06114, PRK06114, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 40.5 bits (95), Expect = 3e-04
Identities = 33/124 (26%), Positives = 57/124 (45%), Gaps = 13/124 (10%)
Query: 85 LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLG 144
L + VN AGIA + + EQ +N+T + + +A + A L
Sbjct: 87 LTLAVNAAGIANANPAEEM-EEEQWQTVMDINLTGVFL-----------SCQAEARAMLE 134
Query: 145 SSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWV 204
+ +IVN++S+ G I + H Y SKA + ++SL+++ G I ++ PG+
Sbjct: 135 NGGGSIVNIASMSGIIVNRGLLQAH-YNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYT 193
Query: 205 KTDM 208
T M
Sbjct: 194 ATPM 197
|
Length = 254 |
| >gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 40.1 bits (94), Expect = 5e-04
Identities = 41/197 (20%), Positives = 82/197 (41%), Gaps = 21/197 (10%)
Query: 5 LITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTD 64
L+TG G+GL + K L G A + + + A ++ AQ ++ DVT
Sbjct: 5 LVTGGASGIGLAIAKRLAAEG----AAVVVADIDPEIAEKVAEAAQGGPRALGVQCDVTS 60
Query: 65 FSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLT 124
++ Q F+ V++ GL+++V+NAGI A + + E +N+T +++
Sbjct: 61 EAQVQSA-FEQA--VLEFGGLDIVVSNAGI-ATSSPIAETSLEDWNRSMDINLTGHFLVS 116
Query: 125 KTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNAATRS 184
+ ++K +G + + +++ Y +KAA R
Sbjct: 117 REAFRIMKS-------QGIGGNIVFNASKNAVAPGP------NAAAYSAAKAAEAHLARC 163
Query: 185 LSIDLKGDKIIATAMHP 201
L+++ D I ++P
Sbjct: 164 LALEGGEDGIRVNTVNP 180
|
This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250 |
| >gnl|CDD|187670 cd09810, LPOR_like_SDR_c_like, light-dependent protochlorophyllide reductase (LPOR)-like, classical (c)-like SDRs | Back alignment and domain information |
|---|
Score = 39.4 bits (92), Expect = 8e-04
Identities = 45/183 (24%), Positives = 69/183 (37%), Gaps = 24/183 (13%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIEL 60
+++ITG + GLGL K L G H+ CR+ KA + + + V+
Sbjct: 2 GTVVITGASSGLGLAAAKALARRGE---WHVVMACRDFLKAEQAAQEVGMPKDSYSVLHC 58
Query: 61 DVTDF-SKQQDVLFKDISDVVKDQG--LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNV 117
D+ S +Q V D + G L+ LV NA + + + VN
Sbjct: 59 DLASLDSVRQFV------DNFRRTGRPLDALVCNAAVYLPTAKEPRFTADGFELTVGVNH 112
Query: 118 TAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAA 177
+LT +L L+++ A+ IV V SI NT G P R +
Sbjct: 113 LGHFLLTNLLLEDLQRSENAS---------PRIVIVGSITH--NPNTLAGNVPPRATLGD 161
Query: 178 LNA 180
L
Sbjct: 162 LEG 164
|
Classical SDR-like subgroup containing LPOR and related proteins. Protochlorophyllide (Pchlide) reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 311 |
| >gnl|CDD|183797 PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 38.6 bits (90), Expect = 0.001
Identities = 44/160 (27%), Positives = 70/160 (43%), Gaps = 32/160 (20%)
Query: 56 HVIELDVTDFSKQQDVLFKDISDVVKDQGL-NVLVNNA--GIAAKFTRLGLLKPEQMTDH 112
+ELD+T Q D + ++ V + G ++LVNNA F+ L E++ H
Sbjct: 71 SSMELDLT----QNDAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNL---TAEELDKH 123
Query: 113 FLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQG---GFH 169
++VNV A +L+ K S I+N++S QG G
Sbjct: 124 YMVNVRATTLLSSQFARGFDKKSGGR-----------IINMTS------GQFQGPMVGEL 166
Query: 170 PYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMG 209
Y +K A++A T SL+ ++ I A++PG TD G
Sbjct: 167 AYAATKGAIDALTSSLAAEVAHLGITVNAINPG--PTDTG 204
|
Length = 256 |
| >gnl|CDD|187606 cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 38.9 bits (91), Expect = 0.001
Identities = 52/220 (23%), Positives = 86/220 (39%), Gaps = 43/220 (19%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQH-SNLHVIEL 60
+ LITG GLG +++ V G A + R+ +K E L + +E
Sbjct: 5 EVALITGGGSGLGRALVERFVAEG----AKVAVLDRSAEKVAE---LRADFGDAVVGVEG 57
Query: 61 DVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHF----LVN 116
DV + + + + + K L+ + NAGI T L + E++ + F +N
Sbjct: 58 DVRSLADNERAVARCVERFGK---LDCFIGNAGIWDYSTSLVDIPEEKLDEAFDELFHIN 114
Query: 117 VTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHP------ 170
V ++ K LP L +E + I VS+ GF+P
Sbjct: 115 VKGYILGAKAALPALYA-TEGS----------VIFTVSN----------AGFYPGGGGPL 153
Query: 171 YRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGG 210
Y SK A+ + L+ +L I + PG + TD+ G
Sbjct: 154 YTASKHAVVGLVKQLAYEL-APHIRVNGVAPGGMVTDLRG 192
|
cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB) is a classical SDR, it is of particular importance for its role in the degradation of biphenyl/polychlorinated biphenyls(PCBs); PCBs are a significant source of environmental contamination. This subgroup also includes Pseudomonas putida F1 cis-biphenyl-1,2-dihydrodiol-1,2-dehydrogenase (aka cis-benzene glycol dehydrogenase, encoded by the bnzE gene), which participates in benzene metabolism. In addition it includes Pseudomonas sp. C18 putative 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (aka dibenzothiophene dihydrodiol dehydrogenase, encoded by the doxE gene) which participates in an upper naphthalene catabolic pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257 |
| >gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 38.5 bits (90), Expect = 0.001
Identities = 54/220 (24%), Positives = 96/220 (43%), Gaps = 32/220 (14%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHS-NLHVIEL 60
K LITG + G+G + K G A I N++ + LA ++ H
Sbjct: 11 KIALITGASYGIGFAIAKAYAKAG----ATIVFNDINQELVDKGLAAYRELGIEAHGYVC 66
Query: 61 DVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPE--QMTDHFLVNV 117
DVTD +D + +S + K+ G +++LVNNAGI + L + + Q+ D +++
Sbjct: 67 DVTD----EDGVQAMVSQIEKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVID---IDL 119
Query: 118 TAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAA 177
AP +++K ++P + K I+N+ S+M + T Y +K
Sbjct: 120 NAPFIVSKAVIPSMIKKGHGK-----------IINICSMMSELGRETVSA---YAAAKGG 165
Query: 178 LNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEV 217
L T++++ + I + PG++ T APL
Sbjct: 166 LKMLTKNIASEYGEANIQCNGIGPGYIATP---QTAPLRE 202
|
Length = 265 |
| >gnl|CDD|235627 PRK05854, PRK05854, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 38.5 bits (90), Expect = 0.002
Identities = 55/222 (24%), Positives = 87/222 (39%), Gaps = 43/222 (19%)
Query: 5 LITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTD 64
++TG + GLGLG+ + L G A + RN+ K +A + + L D
Sbjct: 18 VVTGASDGLGLGLARRLAAAG----AEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALD 73
Query: 65 FSKQQDVLFKDISDVVKDQG--LNVLVNNAGIAAKFTRLGLLKPEQMTD-----HFLVNV 117
S V + + ++ +G +++L+NNAG+ R Q T F N
Sbjct: 74 LSSLASV--AALGEQLRAEGRPIHLLINNAGVMTPPER-------QTTADGFELQFGTNH 124
Query: 118 TAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIM---GSI--ED-NTQGGFHP- 170
LT +LPLL+ RA + + SSI G+I +D N + +
Sbjct: 125 LGHFALTAHLLPLLRAG------------RARVTSQSSIAARRGAINWDDLNWERSYAGM 172
Query: 171 --YRCSKAALNAATRSLS--IDLKGDKIIATAMHPGWVKTDM 208
Y SK A+ L G I + HPG T++
Sbjct: 173 RAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNL 214
|
Length = 313 |
| >gnl|CDD|187535 cd02266, SDR, Short-chain dehydrogenases/reductases (SDR) | Back alignment and domain information |
|---|
Score = 37.9 bits (88), Expect = 0.002
Identities = 39/216 (18%), Positives = 64/216 (29%), Gaps = 67/216 (31%)
Query: 4 ILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVT 63
+L+TG + G+G + L + + R
Sbjct: 1 VLVTGGSGGIGG---AIARWLASRGSPKVLVVSR-------------------------- 31
Query: 64 DFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLML 123
+V+V+NA I RL L ++ NV L
Sbjct: 32 ---------------------RDVVVHNAAIL-DDGRLIDLTGSRIERAIRANVVGTRRL 69
Query: 124 TKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNAATR 183
+ L+K + +SS+ G G Y SKAAL+ +
Sbjct: 70 LEAARELMKA-----------KRLGRFILISSVAGLFGAPGLG---GYAASKAALDGLAQ 115
Query: 184 SLSIDLKGDKIIATAMHPGWVKTD--MGGSNAPLEV 217
+ + G+ + ATA+ G G AP E+
Sbjct: 116 QWASEGWGNGLPATAVACGTWAGSGMAKGPVAPEEI 151
|
SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase (KR) domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 186 |
| >gnl|CDD|187669 cd09809, human_WWOX_like_SDR_c-like, human WWOX (WW domain-containing oxidoreductase)-like, classical (c)-like SDRs | Back alignment and domain information |
|---|
Score = 38.3 bits (89), Expect = 0.002
Identities = 30/100 (30%), Positives = 43/100 (43%), Gaps = 14/100 (14%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNK---DKAVELLALAQQHSNLHVI 58
K I+ITG N G+G + G AH+ CRN AV + + + +
Sbjct: 2 KVIIITGANSGIGFETARSFALHG----AHVILACRNMSRASAAVSRILEEWHKARVEAM 57
Query: 59 ELDVTDF-SKQQDV-LFKDISDVVKDQGLNVLVNNAGIAA 96
LD+ S Q+ FK K+ L+VLV NA + A
Sbjct: 58 TLDLASLRSVQRFAEAFKA-----KNSPLHVLVCNAAVFA 92
|
Classical-like SDR domain of human WWOX and related proteins. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 284 |
| >gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR | Back alignment and domain information |
|---|
Score = 38.0 bits (89), Expect = 0.002
Identities = 51/233 (21%), Positives = 87/233 (37%), Gaps = 42/233 (18%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDK---AVELLALAQQHSN-LHV 57
K ITG G+G + K LG A + R + A E ++ H
Sbjct: 4 KVAFITGGGTGIGKAIAKAFAELG----ASVAIAGRKPEVLEAAAE--EISSATGGRAHP 57
Query: 58 IELDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFL-- 114
I+ DV D + + + +K+ G +++L+NNA A F L E ++ +
Sbjct: 58 IQCDVRDPEAVEAA----VDETLKEFGKIDILINNA--AGNF----LAPAESLSPNGFKT 107
Query: 115 ---VNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFH-P 170
+++ TK + L + +I+N+S+ T F
Sbjct: 108 VIDIDLNGTFNTTKAVGKRLIE----------AKHGGSILNISATYA----YTGSPFQVH 153
Query: 171 YRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN-APLEVGAATA 222
+KA ++A TRSL+++ I A+ PG + T G AP
Sbjct: 154 SAAAKAGVDALTRSLAVEWGPYGIRVNAIAPGPIPTTEGMERLAPSGKSEKKM 206
|
TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249 |
| >gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 38.2 bits (89), Expect = 0.002
Identities = 35/123 (28%), Positives = 47/123 (38%), Gaps = 22/123 (17%)
Query: 90 NNAGIAAKFTRLGLLKPEQMTDHF----LVNVTAPLMLTKTMLPLLKKASEANSAAPLGS 145
NNAGI + RL E F VNV + K +PL+ L
Sbjct: 90 NNAGIEIEQGRL----AEGSEAEFDAIMGVNVKGVWLCMKYQIPLM-----------LAQ 134
Query: 146 SRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVK 205
AIVN +S+ G Y SK A+ T+S +I+ I A+ P +
Sbjct: 135 GGGAIVNTASVAGLG---AAPKMSIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVID 191
Query: 206 TDM 208
TDM
Sbjct: 192 TDM 194
|
Length = 253 |
| >gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 38.0 bits (89), Expect = 0.003
Identities = 48/240 (20%), Positives = 88/240 (36%), Gaps = 64/240 (26%)
Query: 2 KSILITGCNRGLGL---------GMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQH 52
K +++TG RG+G G LV L + A + A D+ + ++A
Sbjct: 10 KVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVA----- 64
Query: 53 SNLHVIELDVTDFSKQQDVLFKDISDVVKDQ--GLNVLVNNAGIAAKFTRLGLLKPEQMT 110
DVTD + Q ++ ++ G++V+V NAGIA+ +
Sbjct: 65 --------DVTDLAAMQAA-----AEEAVERFGGIDVVVANAGIASGGS----------- 100
Query: 111 DHFLVNVTAPLMLTKTM-LPLLKKASEANSAAP-LGSSRAAIVNVSSI-------MGSIE 161
V P + + + LL + P L R ++ VSS+ +
Sbjct: 101 ----VAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAAAPGMA-- 154
Query: 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM-GGSNAPLEVGAA 220
Y SKA + A +L +++ + + + W+ TD+ ++A L
Sbjct: 155 --------AYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADADLPAFRE 206
|
Length = 296 |
| >gnl|CDD|181113 PRK07775, PRK07775, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 37.8 bits (88), Expect = 0.003
Identities = 17/50 (34%), Positives = 26/50 (52%)
Query: 171 YRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAA 220
Y +KA L A +L ++L+G + A+ +HPG T MG S +G
Sbjct: 159 YGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPM 208
|
Length = 274 |
| >gnl|CDD|169556 PRK08703, PRK08703, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 37.6 bits (87), Expect = 0.003
Identities = 44/187 (23%), Positives = 75/187 (40%), Gaps = 26/187 (13%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDK--AVELLALAQQHSNLHVIE 59
K+IL+TG ++GLG + K G A + R++ K V + H I
Sbjct: 7 KTILVTGASQGLGEQVAKAYAAAG----ATVILVARHQKKLEKVYDAIVEAGHPEPFAIR 62
Query: 60 LDVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKP---EQMTDHFLVN 116
D+ +++ F+ + + + L A F L L + + + +N
Sbjct: 63 FDLMSAEEKE---FEQFAATIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRIN 119
Query: 117 VTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKA 176
AP+ LT+ + PLLK++ + A+++ V G GGF SKA
Sbjct: 120 TVAPMGLTRALFPLLKQSPD-----------ASVIFVGESHGETPKAYWGGFG---ASKA 165
Query: 177 ALNAATR 183
ALN +
Sbjct: 166 ALNYLCK 172
|
Length = 239 |
| >gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR | Back alignment and domain information |
|---|
Score = 37.2 bits (86), Expect = 0.004
Identities = 55/210 (26%), Positives = 88/210 (41%), Gaps = 29/210 (13%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K+ LITG RG+G + V G A + N + A A + I LD
Sbjct: 4 KTALITGSARGIGRAFAQAYVREG----ARVAIADINLEAARATAAEIGPAA--CAISLD 57
Query: 62 VTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKP--EQMTDHFLVNVT 118
VTD Q + + ++ +V G +++LVNNA A F ++ E F +NV
Sbjct: 58 VTD----QASIDRCVAALVDRWGSIDILVNNA---ALFDLAPIVDITRESYDRLFAINV- 109
Query: 119 APLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAAL 178
L +++ + A A G I+N++S G + G Y +KAA+
Sbjct: 110 ------SGTLFMMQAVARAMIAQGRGGK---IINMASQAGRRGEALVG---VYCATKAAV 157
Query: 179 NAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
+ T+S ++L I A+ PG V +
Sbjct: 158 ISLTQSAGLNLIRHGINVNAIAPGVVDGEH 187
|
This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254 |
| >gnl|CDD|183772 PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 37.2 bits (87), Expect = 0.004
Identities = 25/74 (33%), Positives = 32/74 (43%), Gaps = 16/74 (21%)
Query: 143 LGSSRAAIVNVSSIMGSIEDNTQGGFH--PYRCSKAALNAATRSLSIDLKGDKIIATAMH 200
L AIVNVSSI G + PY +K +NA T SL+ + I A+
Sbjct: 132 LAQGGGAIVNVSSI-------ATRGINRVPYSAAKGGVNALTASLAFEYAEHGIRVNAVA 184
Query: 201 PGWVKTDMGGSNAP 214
P GG+ AP
Sbjct: 185 P-------GGTEAP 191
|
Length = 260 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 248 | |||
| KOG1611|consensus | 249 | 100.0 | ||
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 100.0 | |
| KOG1200|consensus | 256 | 100.0 | ||
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 100.0 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| KOG1205|consensus | 282 | 100.0 | ||
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 100.0 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 100.0 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 100.0 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 100.0 | |
| KOG1201|consensus | 300 | 100.0 | ||
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 100.0 | |
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 100.0 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 100.0 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 100.0 | |
| KOG0725|consensus | 270 | 100.0 | ||
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 100.0 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 100.0 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 100.0 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08643 | 256 | acetoin reductase; Validated | 100.0 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 100.0 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 100.0 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 100.0 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 100.0 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 100.0 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 100.0 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 100.0 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 100.0 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 100.0 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 100.0 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 100.0 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 100.0 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 100.0 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 100.0 | |
| PF13561 | 241 | adh_short_C2: Enoyl-(Acyl carrier protein) reducta | 100.0 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 100.0 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 100.0 | |
| KOG1610|consensus | 322 | 100.0 | ||
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 100.0 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 100.0 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 100.0 | |
| TIGR01500 | 256 | sepiapter_red sepiapterin reductase. This model de | 100.0 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 100.0 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 100.0 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 100.0 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 100.0 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 100.0 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 100.0 | |
| PLN00015 | 308 | protochlorophyllide reductase | 100.0 | |
| PRK06300 | 299 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 100.0 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 100.0 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 100.0 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 100.0 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK05717 | 255 | oxidoreductase; Validated | 100.0 | |
| KOG1207|consensus | 245 | 100.0 | ||
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK09009 | 235 | C factor cell-cell signaling protein; Provisional | 100.0 | |
| KOG4169|consensus | 261 | 100.0 | ||
| COG3967 | 245 | DltE Short-chain dehydrogenase involved in D-alani | 100.0 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 100.0 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 100.0 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 100.0 | |
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 100.0 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 100.0 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 100.0 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 100.0 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 100.0 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 100.0 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 100.0 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 100.0 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 100.0 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 100.0 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 100.0 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 100.0 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 100.0 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 100.0 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 100.0 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 100.0 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 100.0 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 100.0 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 100.0 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 100.0 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 100.0 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 100.0 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 100.0 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 100.0 | |
| KOG1208|consensus | 314 | 100.0 | ||
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 100.0 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 100.0 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 100.0 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 100.0 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 100.0 | |
| KOG1199|consensus | 260 | 100.0 | ||
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 99.98 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.98 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 99.98 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 99.98 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 99.98 | |
| KOG1209|consensus | 289 | 99.97 | ||
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.97 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.97 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 99.97 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 99.97 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 99.97 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.97 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.97 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.97 | |
| COG1028 | 251 | FabG Dehydrogenases with different specificities ( | 99.97 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 99.97 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 99.97 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 99.97 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.97 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 99.97 | |
| KOG1014|consensus | 312 | 99.97 | ||
| KOG1210|consensus | 331 | 99.97 | ||
| PRK08264 | 238 | short chain dehydrogenase; Validated | 99.96 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 99.96 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 99.96 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 99.96 | |
| KOG1204|consensus | 253 | 99.95 | ||
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 99.94 | |
| COG0623 | 259 | FabI Enoyl-[acyl-carrier-protein] | 99.94 | |
| PRK12428 | 241 | 3-alpha-hydroxysteroid dehydrogenase; Provisional | 99.94 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 99.93 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 99.91 | |
| smart00822 | 180 | PKS_KR This enzymatic domain is part of bacterial | 99.9 | |
| KOG1478|consensus | 341 | 99.88 | ||
| PF08659 | 181 | KR: KR domain; InterPro: IPR013968 This domain is | 99.86 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 99.86 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 99.85 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 99.84 | |
| PRK13656 | 398 | trans-2-enoyl-CoA reductase; Provisional | 99.82 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 99.81 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 99.77 | |
| PRK06720 | 169 | hypothetical protein; Provisional | 99.76 | |
| PLN02583 | 297 | cinnamoyl-CoA reductase | 99.76 | |
| KOG1502|consensus | 327 | 99.76 | ||
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.75 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 99.74 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 99.74 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 99.73 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 99.73 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 99.73 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 99.72 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 99.72 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 99.7 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.69 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 99.69 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 99.67 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 99.66 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 99.65 | |
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 99.65 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 99.65 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 99.64 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 99.64 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 99.64 | |
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 99.62 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 99.62 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 99.61 | |
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 99.6 | |
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 99.59 | |
| KOG4022|consensus | 236 | 99.59 | ||
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 99.58 | |
| COG1087 | 329 | GalE UDP-glucose 4-epimerase [Cell envelope biogen | 99.56 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 99.55 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 99.53 | |
| PF08643 | 299 | DUF1776: Fungal family of unknown function (DUF177 | 99.51 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.5 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 99.49 | |
| KOG1371|consensus | 343 | 99.48 | ||
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 99.47 | |
| COG0451 | 314 | WcaG Nucleoside-diphosphate-sugar epimerases [Cell | 99.47 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 99.44 | |
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 99.43 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 99.41 | |
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 99.41 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 99.41 | |
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 99.41 | |
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 99.4 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 99.4 | |
| COG1091 | 281 | RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo | 99.4 | |
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 99.4 | |
| PLN02725 | 306 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas | 99.38 | |
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 99.35 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.31 | |
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 99.3 | |
| KOG1430|consensus | 361 | 99.25 | ||
| PLN02996 | 491 | fatty acyl-CoA reductase | 99.22 | |
| PRK05865 | 854 | hypothetical protein; Provisional | 99.21 | |
| COG1089 | 345 | Gmd GDP-D-mannose dehydratase [Cell envelope bioge | 99.1 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 99.08 | |
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 99.07 | |
| PLN02778 | 298 | 3,5-epimerase/4-reductase | 99.06 | |
| TIGR01777 | 292 | yfcH conserved hypothetical protein TIGR01777. Thi | 99.06 | |
| COG1090 | 297 | Predicted nucleoside-diphosphate sugar epimerase [ | 99.02 | |
| PRK08309 | 177 | short chain dehydrogenase; Provisional | 98.98 | |
| KOG1429|consensus | 350 | 98.98 | ||
| PLN02503 | 605 | fatty acyl-CoA reductase 2 | 98.97 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.95 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 98.95 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 98.93 | |
| TIGR02114 | 227 | coaB_strep phosphopantothenate--cysteine ligase, s | 98.9 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 98.78 | |
| KOG1202|consensus | 2376 | 98.75 | ||
| KOG0747|consensus | 331 | 98.74 | ||
| PRK12320 | 699 | hypothetical protein; Provisional | 98.63 | |
| KOG1203|consensus | 411 | 98.48 | ||
| PRK06732 | 229 | phosphopantothenate--cysteine ligase; Validated | 98.42 | |
| PRK05579 | 399 | bifunctional phosphopantothenoylcysteine decarboxy | 98.39 | |
| cd01078 | 194 | NAD_bind_H4MPT_DH NADP binding domain of methylene | 98.37 | |
| PRK12548 | 289 | shikimate 5-dehydrogenase; Provisional | 98.37 | |
| KOG1431|consensus | 315 | 98.36 | ||
| KOG1221|consensus | 467 | 98.35 | ||
| COG1748 | 389 | LYS9 Saccharopine dehydrogenase and related protei | 98.26 | |
| COG4982 | 866 | 3-oxoacyl-[acyl-carrier protein] | 98.25 | |
| COG2910 | 211 | Putative NADH-flavin reductase [General function p | 98.23 | |
| KOG2865|consensus | 391 | 98.23 | ||
| TIGR00521 | 390 | coaBC_dfp phosphopantothenoylcysteine decarboxylas | 98.19 | |
| COG0702 | 275 | Predicted nucleoside-diphosphate-sugar epimerases | 98.13 | |
| PLN00106 | 323 | malate dehydrogenase | 98.06 | |
| PTZ00325 | 321 | malate dehydrogenase; Provisional | 97.91 | |
| PF01488 | 135 | Shikimate_DH: Shikimate / quinate 5-dehydrogenase; | 97.9 | |
| KOG2774|consensus | 366 | 97.88 | ||
| PF03435 | 386 | Saccharop_dh: Saccharopine dehydrogenase ; InterPr | 97.86 | |
| KOG1372|consensus | 376 | 97.82 | ||
| PF00056 | 141 | Ldh_1_N: lactate/malate dehydrogenase, NAD binding | 97.78 | |
| KOG4039|consensus | 238 | 97.76 | ||
| cd01336 | 325 | MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli | 97.69 | |
| TIGR00507 | 270 | aroE shikimate 5-dehydrogenase. This model finds p | 97.57 | |
| PRK09620 | 229 | hypothetical protein; Provisional | 97.55 | |
| PRK14982 | 340 | acyl-ACP reductase; Provisional | 97.47 | |
| cd08253 | 325 | zeta_crystallin Zeta-crystallin with NADP-dependen | 97.46 | |
| cd01338 | 322 | MDH_choloroplast_like Chloroplast-like malate dehy | 97.44 | |
| KOG2733|consensus | 423 | 97.43 | ||
| PRK00258 | 278 | aroE shikimate 5-dehydrogenase; Reviewed | 97.41 | |
| cd05291 | 306 | HicDH_like L-2-hydroxyisocapronate dehydrogenases | 97.39 | |
| cd00704 | 323 | MDH Malate dehydrogenase. Malate dehydrogenase (MD | 97.33 | |
| TIGR01758 | 324 | MDH_euk_cyt malate dehydrogenase, NAD-dependent. T | 97.27 | |
| cd01065 | 155 | NAD_bind_Shikimate_DH NAD(P) binding domain of Shi | 97.24 | |
| PRK14106 | 450 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 97.24 | |
| PRK00066 | 315 | ldh L-lactate dehydrogenase; Reviewed | 97.04 | |
| PRK05086 | 312 | malate dehydrogenase; Provisional | 97.04 | |
| cd08266 | 342 | Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam | 96.96 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 96.85 | |
| cd05294 | 309 | LDH-like_MDH_nadp A lactate dehydrogenases-like st | 96.77 | |
| PRK06849 | 389 | hypothetical protein; Provisional | 96.76 | |
| TIGR01809 | 282 | Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO | 96.69 | |
| cd05293 | 312 | LDH_1 A subgroup of L-lactate dehydrogenases. L-la | 96.68 | |
| PRK02472 | 447 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 96.62 | |
| cd01337 | 310 | MDH_glyoxysomal_mitochondrial Glyoxysomal and mito | 96.57 | |
| COG3268 | 382 | Uncharacterized conserved protein [Function unknow | 96.54 | |
| TIGR01772 | 312 | MDH_euk_gproteo malate dehydrogenase, NAD-dependen | 96.53 | |
| PF04127 | 185 | DFP: DNA / pantothenate metabolism flavoprotein; I | 96.5 | |
| cd00650 | 263 | LDH_MDH_like NAD-dependent, lactate dehydrogenase- | 96.48 | |
| PLN00112 | 444 | malate dehydrogenase (NADP); Provisional | 96.43 | |
| PRK12549 | 284 | shikimate 5-dehydrogenase; Reviewed | 96.43 | |
| PRK12749 | 288 | quinate/shikimate dehydrogenase; Reviewed | 96.41 | |
| PRK06223 | 307 | malate dehydrogenase; Reviewed | 96.4 | |
| TIGR01759 | 323 | MalateDH-SF1 malate dehydrogenase. This model repr | 96.37 | |
| PRK05442 | 326 | malate dehydrogenase; Provisional | 96.3 | |
| PLN02602 | 350 | lactate dehydrogenase | 96.27 | |
| PRK14027 | 283 | quinate/shikimate dehydrogenase; Provisional | 96.24 | |
| COG0604 | 326 | Qor NADPH:quinone reductase and related Zn-depende | 96.22 | |
| PF12242 | 78 | Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2 | 96.22 | |
| cd05276 | 323 | p53_inducible_oxidoreductase PIG3 p53-inducible qu | 96.21 | |
| cd05290 | 307 | LDH_3 A subgroup of L-lactate dehydrogenases. L-la | 96.19 | |
| PLN02520 | 529 | bifunctional 3-dehydroquinate dehydratase/shikimat | 96.18 | |
| TIGR00715 | 256 | precor6x_red precorrin-6x reductase. This enzyme w | 96.17 | |
| PRK15116 | 268 | sulfur acceptor protein CsdL; Provisional | 96.16 | |
| cd05188 | 271 | MDR Medium chain reductase/dehydrogenase (MDR)/zin | 96.16 | |
| TIGR01757 | 387 | Malate-DH_plant malate dehydrogenase, NADP-depende | 96.09 | |
| PRK13940 | 414 | glutamyl-tRNA reductase; Provisional | 96.09 | |
| cd05292 | 308 | LDH_2 A subgroup of L-lactate dehydrogenases. L-la | 96.0 | |
| PLN02819 | 1042 | lysine-ketoglutarate reductase/saccharopine dehydr | 95.99 | |
| PTZ00082 | 321 | L-lactate dehydrogenase; Provisional | 95.99 | |
| PTZ00117 | 319 | malate dehydrogenase; Provisional | 95.99 | |
| COG0169 | 283 | AroE Shikimate 5-dehydrogenase [Amino acid transpo | 95.96 | |
| COG0039 | 313 | Mdh Malate/lactate dehydrogenases [Energy producti | 95.95 | |
| cd08295 | 338 | double_bond_reductase_like Arabidopsis alkenal dou | 95.92 | |
| PF03446 | 163 | NAD_binding_2: NAD binding domain of 6-phosphogluc | 95.9 | |
| TIGR02825 | 325 | B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15 | 95.89 | |
| cd08259 | 332 | Zn_ADH5 Alcohol dehydrogenases of the MDR family. | 95.81 | |
| cd00755 | 231 | YgdL_like Family of activating enzymes (E1) of ubi | 95.77 | |
| PRK14968 | 188 | putative methyltransferase; Provisional | 95.68 | |
| cd08293 | 345 | PTGR2 Prostaglandin reductase. Prostaglandins and | 95.63 | |
| TIGR00518 | 370 | alaDH alanine dehydrogenase. The family of known L | 95.59 | |
| TIGR01915 | 219 | npdG NADPH-dependent F420 reductase. This model re | 95.58 | |
| COG0569 | 225 | TrkA K+ transport systems, NAD-binding component [ | 95.53 | |
| PLN03154 | 348 | putative allyl alcohol dehydrogenase; Provisional | 95.5 | |
| COG2085 | 211 | Predicted dinucleotide-binding enzymes [General fu | 95.47 | |
| TIGR02824 | 325 | quinone_pig3 putative NAD(P)H quinone oxidoreducta | 95.47 | |
| cd00300 | 300 | LDH_like L-lactate dehydrogenase-like enzymes. Mem | 95.45 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 95.39 | |
| TIGR01771 | 299 | L-LDH-NAD L-lactate dehydrogenase. This model repr | 95.29 | |
| PF10100 | 429 | DUF2338: Uncharacterized protein conserved in bact | 95.29 | |
| cd08294 | 329 | leukotriene_B4_DH_like 13-PGR is a bifunctional en | 95.12 | |
| PF02254 | 116 | TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg | 95.09 | |
| PRK09424 | 509 | pntA NAD(P) transhydrogenase subunit alpha; Provis | 95.07 | |
| KOG1198|consensus | 347 | 95.05 | ||
| cd08268 | 328 | MDR2 Medium chain dehydrogenases/reductase (MDR)/z | 95.01 | |
| COG2130 | 340 | Putative NADP-dependent oxidoreductases [General f | 95.01 | |
| TIGR00561 | 511 | pntA NAD(P) transhydrogenase, alpha subunit. In so | 94.96 | |
| cd01075 | 200 | NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l | 94.94 | |
| cd08238 | 410 | sorbose_phosphate_red L-sorbose-1-phosphate reduct | 94.92 | |
| PRK15076 | 431 | alpha-galactosidase; Provisional | 94.62 | |
| cd01339 | 300 | LDH-like_MDH L-lactate dehydrogenase-like malate d | 94.61 | |
| cd05213 | 311 | NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain | 94.53 | |
| COG4123 | 248 | Predicted O-methyltransferase [General function pr | 94.5 | |
| PRK14874 | 334 | aspartate-semialdehyde dehydrogenase; Provisional | 94.48 | |
| PRK09310 | 477 | aroDE bifunctional 3-dehydroquinate dehydratase/sh | 94.44 | |
| PRK04148 | 134 | hypothetical protein; Provisional | 94.43 | |
| PF10727 | 127 | Rossmann-like: Rossmann-like domain; InterPro: IPR | 94.39 | |
| KOG3191|consensus | 209 | 94.39 | ||
| COG0373 | 414 | HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | 94.37 | |
| PRK09260 | 288 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 94.36 | |
| PLN00203 | 519 | glutamyl-tRNA reductase | 94.32 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 94.31 | |
| cd08244 | 324 | MDR_enoyl_red Possible enoyl reductase. Member ide | 94.31 | |
| COG1064 | 339 | AdhP Zn-dependent alcohol dehydrogenases [General | 94.27 | |
| PF00107 | 130 | ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: | 94.25 | |
| PRK00045 | 423 | hemA glutamyl-tRNA reductase; Reviewed | 94.2 | |
| PTZ00354 | 334 | alcohol dehydrogenase; Provisional | 94.19 | |
| cd05295 | 452 | MDH_like Malate dehydrogenase-like. These MDH-like | 94.18 | |
| TIGR01763 | 305 | MalateDH_bact malate dehydrogenase, NAD-dependent. | 94.17 | |
| PRK12550 | 272 | shikimate 5-dehydrogenase; Reviewed | 94.13 | |
| PF01118 | 121 | Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi | 94.09 | |
| cd08241 | 323 | QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t | 94.07 | |
| cd08239 | 339 | THR_DH_like L-threonine dehydrogenase (TDH)-like. | 94.06 | |
| cd05288 | 329 | PGDH Prostaglandin dehydrogenases. Prostaglandins | 94.04 | |
| TIGR00872 | 298 | gnd_rel 6-phosphogluconate dehydrogenase (decarbox | 94.03 | |
| PRK05447 | 385 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase; P | 94.0 | |
| PF01113 | 124 | DapB_N: Dihydrodipicolinate reductase, N-terminus; | 93.93 | |
| TIGR02356 | 202 | adenyl_thiF thiazole biosynthesis adenylyltransfer | 93.91 | |
| PRK12475 | 338 | thiamine/molybdopterin biosynthesis MoeB-like prot | 93.89 | |
| PRK13982 | 475 | bifunctional SbtC-like/phosphopantothenoylcysteine | 93.85 | |
| cd08292 | 324 | ETR_like_2 2-enoyl thioester reductase (ETR) like | 93.85 | |
| PRK04308 | 445 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 93.84 | |
| TIGR01751 | 398 | crot-CoA-red crotonyl-CoA reductase. The enzyme mo | 93.83 | |
| PF02737 | 180 | 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind | 93.82 | |
| cd08291 | 324 | ETR_like_1 2-enoyl thioester reductase (ETR) like | 93.8 | |
| TIGR03201 | 349 | dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co | 93.79 | |
| PRK07688 | 339 | thiamine/molybdopterin biosynthesis ThiF/MoeB-like | 93.73 | |
| cd08246 | 393 | crotonyl_coA_red crotonyl-CoA reductase. Crotonyl- | 93.69 | |
| TIGR01035 | 417 | hemA glutamyl-tRNA reductase. This enzyme, togethe | 93.68 | |
| PRK08762 | 376 | molybdopterin biosynthesis protein MoeB; Validated | 93.68 | |
| PRK09880 | 343 | L-idonate 5-dehydrogenase; Provisional | 93.62 | |
| TIGR02818 | 368 | adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr | 93.51 | |
| PRK08306 | 296 | dipicolinate synthase subunit A; Reviewed | 93.48 | |
| PRK12767 | 326 | carbamoyl phosphate synthase-like protein; Provisi | 93.44 | |
| cd08300 | 368 | alcohol_DH_class_III class III alcohol dehydrogena | 93.43 | |
| PF01262 | 168 | AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal | 93.33 | |
| PRK00436 | 343 | argC N-acetyl-gamma-glutamyl-phosphate reductase; | 93.31 | |
| PRK08655 | 437 | prephenate dehydrogenase; Provisional | 93.3 | |
| cd08281 | 371 | liver_ADH_like1 Zinc-dependent alcohol dehydrogena | 93.29 | |
| cd08250 | 329 | Mgc45594_like Mgc45594 gene product and other MDR | 93.26 | |
| cd05286 | 320 | QOR2 Quinone oxidoreductase (QOR). Quinone oxidore | 93.21 | |
| PLN02740 | 381 | Alcohol dehydrogenase-like | 93.18 | |
| cd05282 | 323 | ETR_like 2-enoyl thioester reductase-like. 2-enoyl | 93.16 | |
| PRK06129 | 308 | 3-hydroxyacyl-CoA dehydrogenase; Validated | 93.1 | |
| PRK09599 | 301 | 6-phosphogluconate dehydrogenase-like protein; Rev | 93.09 | |
| cd08233 | 351 | butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog | 93.07 | |
| PF05185 | 448 | PRMT5: PRMT5 arginine-N-methyltransferase; InterPr | 93.05 | |
| PRK01438 | 480 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 93.02 | |
| PF03807 | 96 | F420_oxidored: NADP oxidoreductase coenzyme F420-d | 92.92 | |
| cd01080 | 168 | NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of | 92.88 | |
| TIGR02853 | 287 | spore_dpaA dipicolinic acid synthetase, A subunit. | 92.82 | |
| COG5322 | 351 | Predicted dehydrogenase [General function predicti | 92.8 | |
| cd08297 | 341 | CAD3 Cinnamyl alcohol dehydrogenases (CAD). These | 92.71 | |
| PRK12490 | 299 | 6-phosphogluconate dehydrogenase-like protein; Rev | 92.71 | |
| TIGR03451 | 358 | mycoS_dep_FDH mycothiol-dependent formaldehyde deh | 92.69 | |
| PRK00048 | 257 | dihydrodipicolinate reductase; Provisional | 92.6 | |
| cd01487 | 174 | E1_ThiF_like E1_ThiF_like. Member of superfamily o | 92.54 | |
| TIGR02992 | 326 | ectoine_eutC ectoine utilization protein EutC. Mem | 92.49 | |
| PRK07819 | 286 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 92.47 | |
| TIGR03366 | 280 | HpnZ_proposed putative phosphonate catabolism asso | 92.43 | |
| PF12076 | 164 | Wax2_C: WAX2 C-terminal domain; InterPro: IPR02194 | 92.42 | |
| PRK00094 | 325 | gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr | 92.24 | |
| PLN02968 | 381 | Probable N-acetyl-gamma-glutamyl-phosphate reducta | 92.09 | |
| cd08301 | 369 | alcohol_DH_plants Plant alcohol dehydrogenase. NAD | 92.02 | |
| PRK11873 | 272 | arsM arsenite S-adenosylmethyltransferase; Reviewe | 91.96 | |
| PF02670 | 129 | DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re | 91.93 | |
| PF03721 | 185 | UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen | 91.86 | |
| PRK15461 | 296 | NADH-dependent gamma-hydroxybutyrate dehydrogenase | 91.81 | |
| cd08290 | 341 | ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi | 91.8 | |
| COG3007 | 398 | Uncharacterized paraquat-inducible protein B [Func | 91.8 | |
| cd08283 | 386 | FDH_like_1 Glutathione-dependent formaldehyde dehy | 91.65 | |
| cd08231 | 361 | MDR_TM0436_like Hypothetical enzyme TM0436 resembl | 91.63 | |
| PRK14967 | 223 | putative methyltransferase; Provisional | 91.55 | |
| PRK08291 | 330 | ectoine utilization protein EutC; Validated | 91.47 | |
| cd08269 | 312 | Zn_ADH9 Alcohol dehydrogenases of the MDR family. | 91.45 | |
| PRK08293 | 287 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 91.27 | |
| cd05297 | 423 | GH4_alpha_glucosidase_galactosidase Glycoside Hydr | 91.26 | |
| cd08243 | 320 | quinone_oxidoreductase_like_1 Quinone oxidoreducta | 91.26 | |
| TIGR00243 | 389 | Dxr 1-deoxy-D-xylulose 5-phosphate reductoisomeras | 91.25 | |
| PRK07340 | 304 | ornithine cyclodeaminase; Validated | 91.19 | |
| PRK05597 | 355 | molybdopterin biosynthesis protein MoeB; Validated | 91.14 | |
| PRK10754 | 327 | quinone oxidoreductase, NADPH-dependent; Provision | 91.12 | |
| COG2263 | 198 | Predicted RNA methylase [Translation, ribosomal st | 90.97 | |
| cd05285 | 343 | sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a | 90.95 | |
| PLN02827 | 378 | Alcohol dehydrogenase-like | 90.93 | |
| PRK07531 | 495 | bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe | 90.91 | |
| PRK08644 | 212 | thiamine biosynthesis protein ThiF; Provisional | 90.89 | |
| COG0240 | 329 | GpsA Glycerol-3-phosphate dehydrogenase [Energy pr | 90.85 | |
| PF02826 | 178 | 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy | 90.81 | |
| cd08272 | 326 | MDR6 Medium chain dehydrogenases/reductase (MDR)/z | 90.77 | |
| PF01210 | 157 | NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate | 90.65 | |
| COG4408 | 431 | Uncharacterized protein conserved in bacteria [Fun | 90.65 | |
| PRK14618 | 328 | NAD(P)H-dependent glycerol-3-phosphate dehydrogena | 90.64 | |
| PRK06522 | 304 | 2-dehydropantoate 2-reductase; Reviewed | 90.51 | |
| COG2084 | 286 | MmsB 3-hydroxyisobutyrate dehydrogenase and relate | 90.42 | |
| PRK10309 | 347 | galactitol-1-phosphate dehydrogenase; Provisional | 90.4 | |
| TIGR03704 | 251 | PrmC_rel_meth putative protein-(glutamine-N5) meth | 90.4 |
| >KOG1611|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-41 Score=264.25 Aligned_cols=245 Identities=43% Similarity=0.677 Sum_probs=217.7
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHH-HHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAV-ELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
+|.++||||.+|||..++++|++.- ...+++..+|+++++. ++.......+++++++.|+++.++ ++.+++++.+.
T Consensus 3 pksv~ItGaNRGIGlgLVk~llk~~--~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS-~~~~~~~V~~i 79 (249)
T KOG1611|consen 3 PKSVFITGANRGIGLGLVKELLKDK--GIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDES-IDNFVQEVEKI 79 (249)
T ss_pred CccEEEeccCcchhHHHHHHHhcCC--CcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHH-HHHHHHHHHhh
Confidence 4789999999999999999999655 3356666788888853 333333357799999999999999 99999999999
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
.+..++|+|++|||+..+.....+-+.+.|.+++++|..++++++|+|+|+|++.+.....++....+..|||+||.++.
T Consensus 80 Vg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s 159 (249)
T KOG1611|consen 80 VGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGS 159 (249)
T ss_pred cccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccc
Confidence 88778999999999987766666677889999999999999999999999999987766666777778899999999988
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCCCCchhhHHHHHHHHhhhcccccccce
Q psy11190 160 IEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQSLGEAHNGGF 239 (248)
Q Consensus 160 ~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 239 (248)
.+.....++.+|..||+|+++|+|+++.++++.+|.|..++||||+|+|......+++|+.+..++.-+......++|.|
T Consensus 160 ~~~~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMgg~~a~ltveeSts~l~~~i~kL~~~hnG~f 239 (249)
T KOG1611|consen 160 IGGFRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMGGKKAALTVEESTSKLLASINKLKNEHNGGF 239 (249)
T ss_pred cCCCCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCCCCCcccchhhhHHHHHHHHHhcCcccCcce
Confidence 76655567889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeCCeecC
Q psy11190 240 FEYTGKAIK 248 (248)
Q Consensus 240 ~~~~g~~~~ 248 (248)
+++||.+||
T Consensus 240 fn~dlt~ip 248 (249)
T KOG1611|consen 240 FNRDGTPIP 248 (249)
T ss_pred EccCCCcCC
Confidence 999999987
|
|
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-41 Score=270.53 Aligned_cols=209 Identities=25% Similarity=0.318 Sum_probs=191.4
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|+++|||||||||.++|+.|+++| ++|++.+|..++++++...+.. ..+.++..|++|.++ ++.+++.+.+.++
T Consensus 7 kv~lITGASSGiG~A~A~~l~~~G----~~vvl~aRR~drL~~la~~~~~-~~~~~~~~DVtD~~~-~~~~i~~~~~~~g 80 (246)
T COG4221 7 KVALITGASSGIGEATARALAEAG----AKVVLAARREERLEALADEIGA-GAALALALDVTDRAA-VEAAIEALPEEFG 80 (246)
T ss_pred cEEEEecCcchHHHHHHHHHHHCC----CeEEEEeccHHHHHHHHHhhcc-CceEEEeeccCCHHH-HHHHHHHHHHhhC
Confidence 689999999999999999999999 9999999999999999665543 688999999999999 9999999999998
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+||||||.... .++.+.+.++|+..+++|+.|.++.+++++|.|.++ ..|.|||+||++|.++
T Consensus 81 --~iDiLvNNAGl~~g-~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r-----------~~G~IiN~~SiAG~~~ 146 (246)
T COG4221 81 --RIDILVNNAGLALG-DPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVER-----------KSGHIINLGSIAGRYP 146 (246)
T ss_pred --cccEEEecCCCCcC-ChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhc-----------CCceEEEecccccccc
Confidence 59999999999876 899999999999999999999999999999999997 6889999999999988
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC----------------CCCCchhhHHHHHH
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS----------------NAPLEVGAATAGII 225 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~----------------~~~~~~~~~~~~~~ 225 (248)
. ++...|+++|+++..|++.|+.|+..++|||.+|+||.+.|..... ..+++|+++++.++
T Consensus 147 y---~~~~vY~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g~~~~~~~~y~~~~~l~p~dIA~~V~ 223 (246)
T COG4221 147 Y---PGGAVYGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEGDDERADKVYKGGTALTPEDIAEAVL 223 (246)
T ss_pred C---CCCccchhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceecccccCCchhhhHHHHhccCCCCCHHHHHHHHH
Confidence 7 9999999999999999999999999999999999999996653222 12678999999999
Q ss_pred HHhhhccc
Q psy11190 226 QFIQSLGE 233 (248)
Q Consensus 226 ~~~~~~~~ 233 (248)
+.+..+..
T Consensus 224 ~~~~~P~~ 231 (246)
T COG4221 224 FAATQPQH 231 (246)
T ss_pred HHHhCCCc
Confidence 99988654
|
|
| >KOG1200|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-41 Score=260.60 Aligned_cols=225 Identities=22% Similarity=0.266 Sum_probs=204.2
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|.++||||++|||++++..|+++| ++|++.+++.+.+++....+...+.-..++||+++..+ ++..+++..+.++
T Consensus 15 k~~~vtGg~sGIGrAia~~la~~G----arv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~-v~~~l~e~~k~~g 89 (256)
T KOG1200|consen 15 KVAAVTGGSSGIGRAIAQLLAKKG----ARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHD-VQNTLEEMEKSLG 89 (256)
T ss_pred ceeEEecCCchHHHHHHHHHHhcC----cEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHH-HHHHHHHHHHhcC
Confidence 679999999999999999999999 99999999999888887666655667788999999999 9999999999988
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++++||||||+... ..+-.++.++|+..+.+|+.|.|+++|++.+.|...+. ..++|||+||+.+..+
T Consensus 90 --~psvlVncAGItrD-~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~---------~~~sIiNvsSIVGkiG 157 (256)
T KOG1200|consen 90 --TPSVLVNCAGITRD-GLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQ---------QGLSIINVSSIVGKIG 157 (256)
T ss_pred --CCcEEEEcCccccc-cceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcC---------CCceEEeehhhhcccc
Confidence 69999999999877 66666789999999999999999999999999665421 4569999999999999
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC---------------CCchhhHHHHHHH
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA---------------PLEVGAATAGIIQ 226 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~---------------~~~~~~~~~~~~~ 226 (248)
+ .++..|+++|+++.+|+++.++|++++|||||.|.||++.|||+...+ ..++||++..+.+
T Consensus 158 N---~GQtnYAAsK~GvIgftktaArEla~knIrvN~VlPGFI~tpMT~~mp~~v~~ki~~~iPmgr~G~~EevA~~V~f 234 (256)
T KOG1200|consen 158 N---FGQTNYAASKGGVIGFTKTAARELARKNIRVNVVLPGFIATPMTEAMPPKVLDKILGMIPMGRLGEAEEVANLVLF 234 (256)
T ss_pred c---ccchhhhhhcCceeeeeHHHHHHHhhcCceEeEeccccccChhhhhcCHHHHHHHHccCCccccCCHHHHHHHHHH
Confidence 8 888999999999999999999999999999999999999999998866 3579999999999
Q ss_pred HhhhcccccccceeeeCCee
Q psy11190 227 FIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 227 ~~~~~~~~~~g~~~~~~g~~ 246 (248)
+.++.+.+.+|+.+.++|..
T Consensus 235 LAS~~ssYiTG~t~evtGGl 254 (256)
T KOG1200|consen 235 LASDASSYITGTTLEVTGGL 254 (256)
T ss_pred HhccccccccceeEEEeccc
Confidence 99999999999999998853
|
|
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-41 Score=273.92 Aligned_cols=211 Identities=25% Similarity=0.313 Sum_probs=191.9
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHh-hc-CCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQ-QH-SNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~-~~-~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
||+++|||||+|||+++|++|+++| ++|++++|+.++++++.+.++ .. ..+.++++|+++.++ +..+.+++.+
T Consensus 6 ~~~~lITGASsGIG~~~A~~lA~~g----~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~-~~~l~~~l~~ 80 (265)
T COG0300 6 GKTALITGASSGIGAELAKQLARRG----YNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEA-LERLEDELKE 80 (265)
T ss_pred CcEEEEECCCchHHHHHHHHHHHCC----CEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhH-HHHHHHHHHh
Confidence 5799999999999999999999999 999999999999999954443 33 368899999999999 9999999998
Q ss_pred hhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 79 VVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
... .||+||||||+... .++.+.++++.++.+++|+.+.+.+++.++|.|.++ +.|.|||++|.++
T Consensus 81 ~~~--~IdvLVNNAG~g~~-g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~-----------~~G~IiNI~S~ag 146 (265)
T COG0300 81 RGG--PIDVLVNNAGFGTF-GPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVER-----------GAGHIINIGSAAG 146 (265)
T ss_pred cCC--cccEEEECCCcCCc-cchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----------CCceEEEEechhh
Confidence 765 49999999999886 889999999999999999999999999999999997 7899999999999
Q ss_pred cccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC-----------CCCchhhHHHHHHHH
Q psy11190 159 SIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN-----------APLEVGAATAGIIQF 227 (248)
Q Consensus 159 ~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~-----------~~~~~~~~~~~~~~~ 227 (248)
..+. +....|+++|+++.+|+++|+.|++++||+|.+|+||++.|++.... ...+|+++++..+..
T Consensus 147 ~~p~---p~~avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~~~~~~~~~~~~~~~~~~~~~va~~~~~~ 223 (265)
T COG0300 147 LIPT---PYMAVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFDAKGSDVYLLSPGELVLSPEDVAEAALKA 223 (265)
T ss_pred cCCC---cchHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCccccccccccccccccccchhhccCHHHHHHHHHHH
Confidence 9887 88899999999999999999999999999999999999999998521 157899999999999
Q ss_pred hhhccc
Q psy11190 228 IQSLGE 233 (248)
Q Consensus 228 ~~~~~~ 233 (248)
+....+
T Consensus 224 l~~~k~ 229 (265)
T COG0300 224 LEKGKR 229 (265)
T ss_pred HhcCCc
Confidence 977444
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-39 Score=271.19 Aligned_cols=222 Identities=16% Similarity=0.219 Sum_probs=194.4
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhh--cCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQ--HSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|++|||||++|||+++|++|+++| ++|++++|+.++++++.+.... +.++.++++|++|.++ ++.+++++.+
T Consensus 9 k~~lItGas~gIG~aia~~l~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-i~~~~~~~~~- 82 (263)
T PRK08339 9 KLAFTTASSKGIGFGVARVLARAG----ADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKRED-LERTVKELKN- 82 (263)
T ss_pred CEEEEeCCCCcHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHH-HHHHHHHHHh-
Confidence 789999999999999999999999 8999999998887777443322 3468899999999999 9999998864
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
++ ++|++|||||...+ .++.+.+.++|++.+++|+.+++.++++++|.|.++ +.|+||++||.++.
T Consensus 83 ~g--~iD~lv~nag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~-----------~~g~Ii~isS~~~~ 148 (263)
T PRK08339 83 IG--EPDIFFFSTGGPKP-GYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERK-----------GFGRIIYSTSVAIK 148 (263)
T ss_pred hC--CCcEEEECCCCCCC-CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----------CCCEEEEEcCcccc
Confidence 55 59999999998654 677788999999999999999999999999999875 56899999999987
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC-----------------------C---C
Q psy11190 160 IEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS-----------------------N---A 213 (248)
Q Consensus 160 ~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~-----------------------~---~ 213 (248)
.+. +.+..|+++|+++.+|+++++.|++++|||||+|+||+++|++... . .
T Consensus 149 ~~~---~~~~~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r 225 (263)
T PRK08339 149 EPI---PNIALSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPIPLGR 225 (263)
T ss_pred CCC---CcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhccCCccc
Confidence 765 7788999999999999999999999999999999999999997421 0 1
Q ss_pred CCchhhHHHHHHHHhhhcccccccceeeeCCee
Q psy11190 214 PLEVGAATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
..+|++++..+++++++.....+|+.+.+||..
T Consensus 226 ~~~p~dva~~v~fL~s~~~~~itG~~~~vdgG~ 258 (263)
T PRK08339 226 LGEPEEIGYLVAFLASDLGSYINGAMIPVDGGR 258 (263)
T ss_pred CcCHHHHHHHHHHHhcchhcCccCceEEECCCc
Confidence 346999999999999988889999999999864
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-39 Score=273.02 Aligned_cols=222 Identities=19% Similarity=0.239 Sum_probs=189.8
Q ss_pred ceEEEecCCC--chhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCNR--GLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~--giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|++|||||++ |||+++|++|+++| ++|++.+|+.+..+.+.++....+...++++|++|.++ ++.+++++.+.
T Consensus 8 k~~lVTGas~~~GIG~aiA~~la~~G----a~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~-v~~~~~~~~~~ 82 (271)
T PRK06505 8 KRGLIMGVANDHSIAWGIAKQLAAQG----AELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIAS-VDAVFEALEKK 82 (271)
T ss_pred CEEEEeCCCCCCcHHHHHHHHHHhCC----CEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHH-HHHHHHHHHHH
Confidence 7999999997 99999999999999 89999999865444444443322334578999999999 99999999998
Q ss_pred hcCCCccEEEeccccCCcc---ccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecC
Q psy11190 80 VKDQGLNVLVNNAGIAAKF---TRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSI 156 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~ 156 (248)
++ ++|+||||||..... .++.+.+.++|++.+++|+.++++++++++|.|.+ +|+||++||.
T Consensus 83 ~g--~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~-------------~G~Iv~isS~ 147 (271)
T PRK06505 83 WG--KLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPD-------------GGSMLTLTYG 147 (271)
T ss_pred hC--CCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc-------------CceEEEEcCC
Confidence 87 599999999976421 35678899999999999999999999999999963 4899999999
Q ss_pred CCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC--------------C---CCchhh
Q psy11190 157 MGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN--------------A---PLEVGA 219 (248)
Q Consensus 157 ~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~--------------~---~~~~~~ 219 (248)
.+..+. +.+..|+++|+|+.+|+++|+.|++++|||||+|+||+++|++.... + ..+|+|
T Consensus 148 ~~~~~~---~~~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pee 224 (271)
T PRK06505 148 GSTRVM---PNYNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGDARAIFSYQQRNSPLRRTVTIDE 224 (271)
T ss_pred CccccC---CccchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCcchHHHHHHHhhcCCccccCCHHH
Confidence 887665 77889999999999999999999999999999999999999974310 1 247999
Q ss_pred HHHHHHHHhhhcccccccceeeeCCee
Q psy11190 220 ATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 220 ~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
++..+++++++.....+|+.+..||..
T Consensus 225 va~~~~fL~s~~~~~itG~~i~vdgG~ 251 (271)
T PRK06505 225 VGGSALYLLSDLSSGVTGEIHFVDSGY 251 (271)
T ss_pred HHHHHHHHhCccccccCceEEeecCCc
Confidence 999999999988888999999999863
|
|
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-39 Score=270.81 Aligned_cols=221 Identities=22% Similarity=0.258 Sum_probs=187.9
Q ss_pred ceEEEecCC--CchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhh-cCCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 2 KSILITGCN--RGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQ-HSNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 2 k~~lVtGas--~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
|++|||||+ +|||+++|++|+++| ++|++.+|+.+..+.+.++... +.. .++++|++|.++ ++++++++.+
T Consensus 6 k~~lItGas~~~GIG~aiA~~la~~G----~~Vil~~r~~~~~~~~~~~~~~~~~~-~~~~~Dv~d~~~-v~~~~~~i~~ 79 (274)
T PRK08415 6 KKGLIVGVANNKSIAYGIAKACFEQG----AELAFTYLNEALKKRVEPIAQELGSD-YVYELDVSKPEH-FKSLAESLKK 79 (274)
T ss_pred cEEEEECCCCCCCHHHHHHHHHHHCC----CEEEEEecCHHHHHHHHHHHHhcCCc-eEEEecCCCHHH-HHHHHHHHHH
Confidence 799999997 899999999999999 8999999985322233333222 223 678999999999 9999999999
Q ss_pred hhcCCCccEEEeccccCCc---cccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeec
Q psy11190 79 VVKDQGLNVLVNNAGIAAK---FTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSS 155 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss 155 (248)
.++ ++|+||||||+..+ ..++.+.+.++|++.+++|+.+++++++.++|.|.+ +|+||++||
T Consensus 80 ~~g--~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~-------------~g~Iv~isS 144 (274)
T PRK08415 80 DLG--KIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLND-------------GASVLTLSY 144 (274)
T ss_pred HcC--CCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhcc-------------CCcEEEEec
Confidence 887 59999999998642 256778899999999999999999999999999964 478999999
Q ss_pred CCCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC-----------------CCCchh
Q psy11190 156 IMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN-----------------APLEVG 218 (248)
Q Consensus 156 ~~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~-----------------~~~~~~ 218 (248)
..+..+. +.+..|+++|+|+.+|+++|+.|++++||+||+|+||+++|++.... ...+|+
T Consensus 145 ~~~~~~~---~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~r~~~pe 221 (274)
T PRK08415 145 LGGVKYV---PHYNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIGDFRMILKWNEINAPLKKNVSIE 221 (274)
T ss_pred CCCccCC---CcchhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccchhhHHhhhhhhhCchhccCCHH
Confidence 9887665 77889999999999999999999999999999999999999874310 135799
Q ss_pred hHHHHHHHHhhhcccccccceeeeCCee
Q psy11190 219 AATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
+++..+++++++.....+|+.+..||..
T Consensus 222 dva~~v~fL~s~~~~~itG~~i~vdGG~ 249 (274)
T PRK08415 222 EVGNSGMYLLSDLSSGVTGEIHYVDAGY 249 (274)
T ss_pred HHHHHHHHHhhhhhhcccccEEEEcCcc
Confidence 9999999999988889999999999863
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-39 Score=265.84 Aligned_cols=218 Identities=19% Similarity=0.199 Sum_probs=189.3
Q ss_pred ceEEEecCC--CchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH-HHHHhhcCCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 2 KSILITGCN--RGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL-LALAQQHSNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 2 k~~lVtGas--~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
|+++||||+ +|||+++|++|+++| ++|++.+|+. +..+. .++. ..++.++++|++|.++ ++++++++.+
T Consensus 8 k~~lItGas~~~gIG~a~a~~la~~G----~~Vi~~~r~~-~~~~~~~~~~--~~~~~~~~~Dl~~~~~-v~~~~~~~~~ 79 (252)
T PRK06079 8 KKIVVMGVANKRSIAWGCAQAIKDQG----ATVIYTYQND-RMKKSLQKLV--DEEDLLVECDVASDES-IERAFATIKE 79 (252)
T ss_pred CEEEEeCCCCCCchHHHHHHHHHHCC----CEEEEecCch-HHHHHHHhhc--cCceeEEeCCCCCHHH-HHHHHHHHHH
Confidence 799999999 899999999999999 8999999984 33333 3332 2467889999999999 9999999999
Q ss_pred hhcCCCccEEEeccccCCc---cccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeec
Q psy11190 79 VVKDQGLNVLVNNAGIAAK---FTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSS 155 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss 155 (248)
.++ ++|+||||||...+ ..++.+.+.++|++.+++|+.+++++++.++|.|.+ .|+||++||
T Consensus 80 ~~g--~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~-------------~g~Iv~iss 144 (252)
T PRK06079 80 RVG--KIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNP-------------GASIVTLTY 144 (252)
T ss_pred HhC--CCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhccc-------------CceEEEEec
Confidence 887 59999999998643 256678899999999999999999999999999853 478999999
Q ss_pred CCCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC-----------------CCCchh
Q psy11190 156 IMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN-----------------APLEVG 218 (248)
Q Consensus 156 ~~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~-----------------~~~~~~ 218 (248)
..+..+. +++..|+++|+++.+|+++|+.|++++||+||+|+||+++|++.... ...+|+
T Consensus 145 ~~~~~~~---~~~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pe 221 (252)
T PRK06079 145 FGSERAI---PNYNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKGHKDLLKESDSRTVDGVGVTIE 221 (252)
T ss_pred cCccccC---CcchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCChHHHHHHHHhcCcccCCCCHH
Confidence 9887765 77889999999999999999999999999999999999999975321 135799
Q ss_pred hHHHHHHHHhhhcccccccceeeeCCe
Q psy11190 219 AATAGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
|++..+.+++++.....+|+.+..||.
T Consensus 222 dva~~~~~l~s~~~~~itG~~i~vdgg 248 (252)
T PRK06079 222 EVGNTAAFLLSDLSTGVTGDIIYVDKG 248 (252)
T ss_pred HHHHHHHHHhCcccccccccEEEeCCc
Confidence 999999999998888999999999986
|
|
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-38 Score=266.44 Aligned_cols=223 Identities=21% Similarity=0.231 Sum_probs=188.7
Q ss_pred ceEEEecC--CCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGC--NRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGa--s~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|+++|||| ++|||+++|++|+++| ++|++.+|+....+.+.++....+....+++|++|.++ ++.+++++.+.
T Consensus 7 k~~lITGa~~~~GIG~a~a~~l~~~G----~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-v~~~~~~~~~~ 81 (261)
T PRK08690 7 KKILITGMISERSIAYGIAKACREQG----AELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDE-INQVFADLGKH 81 (261)
T ss_pred cEEEEECCCCCCcHHHHHHHHHHHCC----CEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHH-HHHHHHHHHHH
Confidence 68999997 6799999999999999 89999887643333334444333455689999999999 99999999998
Q ss_pred hcCCCccEEEeccccCCcc----ccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeec
Q psy11190 80 VKDQGLNVLVNNAGIAAKF----TRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSS 155 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss 155 (248)
++ ++|+||||||+.... ..+++.+.++|++.+++|+.+++++++.++|.|++ .+|+||++||
T Consensus 82 ~g--~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~------------~~g~Iv~iss 147 (261)
T PRK08690 82 WD--GLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRG------------RNSAIVALSY 147 (261)
T ss_pred hC--CCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhh------------cCcEEEEEcc
Confidence 87 599999999986431 12356788899999999999999999999999865 3588999999
Q ss_pred CCCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC-----------------CCCchh
Q psy11190 156 IMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN-----------------APLEVG 218 (248)
Q Consensus 156 ~~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~-----------------~~~~~~ 218 (248)
..+..+. +++..|+++|+|+.+|+++++.|++++|||||+|+||+++|++.... ...+|+
T Consensus 148 ~~~~~~~---~~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pe 224 (261)
T PRK08690 148 LGAVRAI---PNYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADFGKLLGHVAAHNPLRRNVTIE 224 (261)
T ss_pred cccccCC---CCcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCchHHHHHHHhhcCCCCCCCCHH
Confidence 9887665 78889999999999999999999999999999999999999974321 135799
Q ss_pred hHHHHHHHHhhhcccccccceeeeCCee
Q psy11190 219 AATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
|++..+++++++.+...+|+.+.+||..
T Consensus 225 evA~~v~~l~s~~~~~~tG~~i~vdgG~ 252 (261)
T PRK08690 225 EVGNTAAFLLSDLSSGITGEITYVDGGY 252 (261)
T ss_pred HHHHHHHHHhCcccCCcceeEEEEcCCc
Confidence 9999999999988889999999999863
|
|
| >KOG1205|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-39 Score=265.35 Aligned_cols=187 Identities=30% Similarity=0.343 Sum_probs=169.0
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH-HHHHhhcC--CceeEEeeccCCchhhhhHHHHhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL-LALAQQHS--NLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~-~~~~~~~~--~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
|+++|||||||||.++|.+|+++| ++++++.|..++++.. +++.+..+ +++++++|++|.++ ++++++++.+
T Consensus 13 kvVvITGASsGIG~~lA~~la~~G----~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~-~~~~~~~~~~ 87 (282)
T KOG1205|consen 13 KVVLITGASSGIGEALAYELAKRG----AKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEES-VKKFVEWAIR 87 (282)
T ss_pred CEEEEeCCCcHHHHHHHHHHHhCC----CceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHH-HHHHHHHHHH
Confidence 799999999999999999999999 8999999998888887 44443322 59999999999999 9999999999
Q ss_pred hhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 79 VVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
.+| ++|+||||||+.. ....++.+.+++...|++|++|+..+++.++|.|+++ ++|+||++||++|
T Consensus 88 ~fg--~vDvLVNNAG~~~-~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r-----------~~GhIVvisSiaG 153 (282)
T KOG1205|consen 88 HFG--RVDVLVNNAGISL-VGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKR-----------NDGHIVVISSIAG 153 (282)
T ss_pred hcC--CCCEEEecCcccc-ccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhc-----------CCCeEEEEecccc
Confidence 998 6999999999988 5788888999999999999999999999999999996 4699999999999
Q ss_pred cccccCCCCCccchhhHHHHHHHHHHHHhhccCCC--eEEEEecCcceecCCCCC
Q psy11190 159 SIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDK--IIATAMHPGWVKTDMGGS 211 (248)
Q Consensus 159 ~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~--i~v~~v~PG~v~t~~~~~ 211 (248)
+.+. |....|++||+|+.+|+++|+.|+.+.+ |++ +|.||+|+|++...
T Consensus 154 ~~~~---P~~~~Y~ASK~Al~~f~etLR~El~~~~~~i~i-~V~PG~V~Te~~~~ 204 (282)
T KOG1205|consen 154 KMPL---PFRSIYSASKHALEGFFETLRQELIPLGTIIII-LVSPGPIETEFTGK 204 (282)
T ss_pred ccCC---CcccccchHHHHHHHHHHHHHHHhhccCceEEE-EEecCceeecccch
Confidence 9987 7677999999999999999999999876 666 99999999997544
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-38 Score=263.28 Aligned_cols=222 Identities=24% Similarity=0.307 Sum_probs=192.5
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHH-HHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELL-ALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|+++||||++|||+++|++|+++| ++|++++|+.. ++.. .+...+.++.++++|+++.++ ++.+++++.+.+
T Consensus 9 k~~lItGas~gIG~aia~~l~~~G----~~vv~~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~-~~~~~~~~~~~~ 81 (251)
T PRK12481 9 KVAIITGCNTGLGQGMAIGLAKAG----ADIVGVGVAEA--PETQAQVEALGRKFHFITADLIQQKD-IDSIVSQAVEVM 81 (251)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC----CEEEEecCchH--HHHHHHHHHcCCeEEEEEeCCCCHHH-HHHHHHHHHHHc
Confidence 789999999999999999999999 89999988642 2232 222234578899999999999 999999999888
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+ ++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|.+++ ..|+||++||..+..
T Consensus 82 g--~iD~lv~~ag~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~----------~~g~ii~isS~~~~~ 148 (251)
T PRK12481 82 G--HIDILINNAGIIRR-QDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQG----------NGGKIINIASMLSFQ 148 (251)
T ss_pred C--CCCEEEECCCcCCC-CCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcC----------CCCEEEEeCChhhcC
Confidence 7 59999999998765 6777889999999999999999999999999997641 358999999999887
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC-----------------CCCchhhHHHH
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN-----------------APLEVGAATAG 223 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~-----------------~~~~~~~~~~~ 223 (248)
+. ++...|+++|+++++|+++++.|++++|||||+|+||+++|++.... ...+|+|++..
T Consensus 149 ~~---~~~~~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~peeva~~ 225 (251)
T PRK12481 149 GG---IRVPSYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRADTARNEAILERIPASRWGTPDDLAGP 225 (251)
T ss_pred CC---CCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhcccChHHHHHHHhcCCCCCCcCHHHHHHH
Confidence 76 67789999999999999999999999999999999999999985421 13479999999
Q ss_pred HHHHhhhcccccccceeeeCCee
Q psy11190 224 IIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 224 ~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
+.+++++.....+|+.+..||..
T Consensus 226 ~~~L~s~~~~~~~G~~i~vdgg~ 248 (251)
T PRK12481 226 AIFLSSSASDYVTGYTLAVDGGW 248 (251)
T ss_pred HHHHhCccccCcCCceEEECCCE
Confidence 99999988889999999999863
|
|
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-38 Score=265.28 Aligned_cols=221 Identities=20% Similarity=0.218 Sum_probs=187.3
Q ss_pred ceEEEecCCC--chhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCNR--GLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~--giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|+++||||++ |||+++|++|+++| ++|++.+|+....+.+.++....+...++++|++|.++ ++++++.+.+.
T Consensus 9 k~~lITGas~~~GIG~a~a~~la~~G----~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~-v~~~~~~~~~~ 83 (260)
T PRK06603 9 KKGLITGIANNMSISWAIAQLAKKHG----AELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKS-ISNLFDDIKEK 83 (260)
T ss_pred cEEEEECCCCCcchHHHHHHHHHHcC----CEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHH-HHHHHHHHHHH
Confidence 7899999998 99999999999999 89999998843222233443332333567899999999 99999999998
Q ss_pred hcCCCccEEEeccccCCc---cccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecC
Q psy11190 80 VKDQGLNVLVNNAGIAAK---FTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSI 156 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~ 156 (248)
++ ++|+||||||...+ ..++.+.+.++|++.+++|+.+++.+++.++|.|.+ +|+||++||.
T Consensus 84 ~g--~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~-------------~G~Iv~isS~ 148 (260)
T PRK06603 84 WG--SFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHD-------------GGSIVTLTYY 148 (260)
T ss_pred cC--CccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhcc-------------CceEEEEecC
Confidence 87 59999999997542 145678899999999999999999999999999953 5899999998
Q ss_pred CCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC-----------------CCCchhh
Q psy11190 157 MGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN-----------------APLEVGA 219 (248)
Q Consensus 157 ~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~-----------------~~~~~~~ 219 (248)
.+..+. +++..|+++|+|+.+|+++|+.|++++||+||+|+||+++|++.... ....|++
T Consensus 149 ~~~~~~---~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~ped 225 (260)
T PRK06603 149 GAEKVI---PNYNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGDFSTMLKSHAATAPLKRNTTQED 225 (260)
T ss_pred ccccCC---CcccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCCCcHHHHHHHHhcCCcCCCCCHHH
Confidence 887665 77889999999999999999999999999999999999999974210 1257999
Q ss_pred HHHHHHHHhhhcccccccceeeeCCe
Q psy11190 220 ATAGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 220 ~~~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
+++.+.+++++.....+|+.+..||.
T Consensus 226 va~~~~~L~s~~~~~itG~~i~vdgG 251 (260)
T PRK06603 226 VGGAAVYLFSELSKGVTGEIHYVDCG 251 (260)
T ss_pred HHHHHHHHhCcccccCcceEEEeCCc
Confidence 99999999998888999999999986
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-38 Score=265.93 Aligned_cols=223 Identities=22% Similarity=0.293 Sum_probs=194.6
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHH-HHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELL-ALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|++|||||++|||++++++|+++| ++|++++|+ ++++++. ++.....++.++++|+++.++ ++.+++++.+.+
T Consensus 7 k~vlItGas~gIG~aia~~l~~~G----~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-~~~~~~~~~~~~ 80 (272)
T PRK08589 7 KVAVITGASTGIGQASAIALAQEG----AYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQ-VKDFASEIKEQF 80 (272)
T ss_pred CEEEEECCCchHHHHHHHHHHHCC----CEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHH-HHHHHHHHHHHc
Confidence 799999999999999999999999 899999999 6666653 333334578899999999999 999999999988
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+ ++|+||||||......++.+.+.+.|++.+++|+.+++.+++.++|.|.+ .+|+||++||..+..
T Consensus 81 g--~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~------------~~g~iv~isS~~~~~ 146 (272)
T PRK08589 81 G--RVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMME------------QGGSIINTSSFSGQA 146 (272)
T ss_pred C--CcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH------------cCCEEEEeCchhhcC
Confidence 7 59999999998654356777889999999999999999999999999987 358999999999887
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC-----------------------CCCch
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN-----------------------APLEV 217 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~-----------------------~~~~~ 217 (248)
+. +....|+++|+++++|+++++.|+.++||+||+|+||+++|++.+.. ...+|
T Consensus 147 ~~---~~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (272)
T PRK08589 147 AD---LYRSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMTPLGRLGKP 223 (272)
T ss_pred CC---CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhccCCCCCCcCH
Confidence 66 67789999999999999999999999999999999999999985421 12469
Q ss_pred hhHHHHHHHHhhhcccccccceeeeCCeec
Q psy11190 218 GAATAGIIQFIQSLGEAHNGGFFEYTGKAI 247 (248)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~ 247 (248)
+++++.++.++++.....+|+.+.++|..+
T Consensus 224 ~~va~~~~~l~s~~~~~~~G~~i~vdgg~~ 253 (272)
T PRK08589 224 EEVAKLVVFLASDDSSFITGETIRIDGGVM 253 (272)
T ss_pred HHHHHHHHHHcCchhcCcCCCEEEECCCcc
Confidence 999999999998888889999999888743
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-38 Score=264.99 Aligned_cols=221 Identities=19% Similarity=0.223 Sum_probs=188.9
Q ss_pred ceEEEecCC--CchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCN--RGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas--~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|++|||||+ +|||+++|++|+++| ++|++.+|+.+..+.+.++....+...++++|++|.++ ++++++++.+.
T Consensus 11 k~~lItGas~g~GIG~a~a~~la~~G----~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-v~~~~~~~~~~ 85 (258)
T PRK07533 11 KRGLVVGIANEQSIAWGCARAFRALG----AELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQ-LEAVFARIAEE 85 (258)
T ss_pred CEEEEECCCCCCcHHHHHHHHHHHcC----CEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHH-HHHHHHHHHHH
Confidence 799999999 599999999999999 89999999865433333333322345688999999999 99999999998
Q ss_pred hcCCCccEEEeccccCCc---cccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecC
Q psy11190 80 VKDQGLNVLVNNAGIAAK---FTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSI 156 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~ 156 (248)
++ ++|+||||||...+ ..++.+.+.++|++.+++|+.+++++++.++|.|++ .|+|+++||.
T Consensus 86 ~g--~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~-------------~g~Ii~iss~ 150 (258)
T PRK07533 86 WG--RLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTN-------------GGSLLTMSYY 150 (258)
T ss_pred cC--CCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhcc-------------CCEEEEEecc
Confidence 87 59999999997643 145677899999999999999999999999999953 4789999998
Q ss_pred CCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC-----------------CCCchhh
Q psy11190 157 MGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN-----------------APLEVGA 219 (248)
Q Consensus 157 ~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~-----------------~~~~~~~ 219 (248)
.+..+. +.+..|+++|+|+.+|+++|+.|++++||+||+|+||+++|+|.+.. ...+|++
T Consensus 151 ~~~~~~---~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~d 227 (258)
T PRK07533 151 GAEKVV---ENYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDFDALLEDAAERAPLRRLVDIDD 227 (258)
T ss_pred ccccCC---ccchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCCcHHHHHHHHhcCCcCCCCCHHH
Confidence 887665 77889999999999999999999999999999999999999985421 1347899
Q ss_pred HHHHHHHHhhhcccccccceeeeCCe
Q psy11190 220 ATAGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 220 ~~~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
++..+++++++.....+|+.+..||.
T Consensus 228 va~~~~~L~s~~~~~itG~~i~vdgg 253 (258)
T PRK07533 228 VGAVAAFLASDAARRLTGNTLYIDGG 253 (258)
T ss_pred HHHHHHHHhChhhccccCcEEeeCCc
Confidence 99999999988788899999999986
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-38 Score=265.91 Aligned_cols=222 Identities=19% Similarity=0.211 Sum_probs=188.5
Q ss_pred ceEEEecCC--CchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCN--RGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas--~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|++|||||+ +|||+++|++|+++| ++|++.+|+....+.+.++....+...++++|++|.++ ++++++++.+.
T Consensus 11 k~~lItGas~~~GIG~aia~~la~~G----~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~-v~~~~~~~~~~ 85 (272)
T PRK08159 11 KRGLILGVANNRSIAWGIAKACRAAG----AELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEAS-IDAVFETLEKK 85 (272)
T ss_pred CEEEEECCCCCCcHHHHHHHHHHHCC----CEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHH-HHHHHHHHHHh
Confidence 789999997 899999999999999 89999988743233333333332345678999999999 99999999998
Q ss_pred hcCCCccEEEeccccCCc---cccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecC
Q psy11190 80 VKDQGLNVLVNNAGIAAK---FTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSI 156 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~ 156 (248)
++ ++|+||||||+..+ ..++.+.+.++|++.+++|+.+++++++.++|.|.+ .|+||++||.
T Consensus 86 ~g--~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~-------------~g~Iv~iss~ 150 (272)
T PRK08159 86 WG--KLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTD-------------GGSILTLTYY 150 (272)
T ss_pred cC--CCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCC-------------CceEEEEecc
Confidence 87 59999999998643 246677899999999999999999999999999853 5899999998
Q ss_pred CCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC-----------------CCCchhh
Q psy11190 157 MGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN-----------------APLEVGA 219 (248)
Q Consensus 157 ~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~-----------------~~~~~~~ 219 (248)
.+..+. +++..|+++|+|+.+|+++|+.|+.++|||||+|+||+++|++.... ...+|+|
T Consensus 151 ~~~~~~---p~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pee 227 (272)
T PRK08159 151 GAEKVM---PHYNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIEE 227 (272)
T ss_pred ccccCC---CcchhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCCcchHHHHHHHhCCcccccCCHHH
Confidence 877655 77889999999999999999999999999999999999999874210 1247999
Q ss_pred HHHHHHHHhhhcccccccceeeeCCee
Q psy11190 220 ATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 220 ~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
+++.+++++++.....+|+.+.+||..
T Consensus 228 vA~~~~~L~s~~~~~itG~~i~vdgG~ 254 (272)
T PRK08159 228 VGDSALYLLSDLSRGVTGEVHHVDSGY 254 (272)
T ss_pred HHHHHHHHhCccccCccceEEEECCCc
Confidence 999999999988889999999999864
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-38 Score=262.19 Aligned_cols=223 Identities=21% Similarity=0.286 Sum_probs=195.5
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHH-HHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|+++||||++|||++++++|+++| ++|++++|+.++++++.+ +...+.++.++++|+++.++ ++.+++++.+.+
T Consensus 7 k~~lItGas~giG~~ia~~l~~~G----~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~~ 81 (254)
T PRK07478 7 KVAIITGASSGIGRAAAKLFAREG----AKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAY-AKALVALAVERF 81 (254)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHH-HHHHHHHHHHhc
Confidence 699999999999999999999999 899999999888777743 33334578899999999999 999999999888
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc-
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS- 159 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~- 159 (248)
+ ++|+||||||...+..++.+.+.++|++.+++|+.+++++++.++|.|+++ +.++||++||..+.
T Consensus 82 ~--~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~-----------~~~~iv~~sS~~~~~ 148 (254)
T PRK07478 82 G--GLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLAR-----------GGGSLIFTSTFVGHT 148 (254)
T ss_pred C--CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----------CCceEEEEechHhhc
Confidence 7 599999999986544567788999999999999999999999999999875 57899999998876
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC-----------------CCchhhHHH
Q psy11190 160 IEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA-----------------PLEVGAATA 222 (248)
Q Consensus 160 ~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~-----------------~~~~~~~~~ 222 (248)
.+. +++..|+++|++++.|+++++.++.++||+||+|+||+++|+|.+... ..+|+++++
T Consensus 149 ~~~---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~ 225 (254)
T PRK07478 149 AGF---PGMAAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDTPEALAFVAGLHALKRMAQPEEIAQ 225 (254)
T ss_pred cCC---CCcchhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCCHHHHHHHHhcCCCCCCcCHHHHHH
Confidence 344 678899999999999999999999999999999999999999754321 347999999
Q ss_pred HHHHHhhhcccccccceeeeCCe
Q psy11190 223 GIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 223 ~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
.+++++++.....+|+.+..||.
T Consensus 226 ~~~~l~s~~~~~~~G~~~~~dgg 248 (254)
T PRK07478 226 AALFLASDAASFVTGTALLVDGG 248 (254)
T ss_pred HHHHHcCchhcCCCCCeEEeCCc
Confidence 99999988788899999999986
|
|
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-38 Score=261.49 Aligned_cols=222 Identities=20% Similarity=0.224 Sum_probs=188.3
Q ss_pred ceEEEecCC--CchhHHHHHHHHhCCCCCCceEEEeecCchh--HHHH-HHHHhhcCCceeEEeeccCCchhhhhHHHHh
Q psy11190 2 KSILITGCN--RGLGLGMIKVLVGLGNNQPAHIFATCRNKDK--AVEL-LALAQQHSNLHVIELDVTDFSKQQDVLFKDI 76 (248)
Q Consensus 2 k~~lVtGas--~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~--~~~~-~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i 76 (248)
|+++||||+ +|||+++|++|+++| ++|++..|+.+. .++. .++......+.++++|++|.++ ++.+++++
T Consensus 7 k~~lItGas~~~GIG~aia~~la~~G----~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~-v~~~~~~~ 81 (258)
T PRK07370 7 KKALVTGIANNRSIAWGIAQQLHAAG----AELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQ-IEETFETI 81 (258)
T ss_pred cEEEEeCCCCCCchHHHHHHHHHHCC----CEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHH-HHHHHHHH
Confidence 789999986 899999999999999 899988765432 2222 3333333457789999999999 99999999
Q ss_pred hhhhcCCCccEEEeccccCCc---cccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEe
Q psy11190 77 SDVVKDQGLNVLVNNAGIAAK---FTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNV 153 (248)
Q Consensus 77 ~~~~~~~~iD~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~v 153 (248)
.+.++ ++|+||||||.... ..++.+.+.++|++.+++|+.+++++++.++|.|.+ .|+||++
T Consensus 82 ~~~~g--~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~-------------~g~Iv~i 146 (258)
T PRK07370 82 KQKWG--KLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSE-------------GGSIVTL 146 (258)
T ss_pred HHHcC--CCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhh-------------CCeEEEE
Confidence 99887 59999999997632 246778899999999999999999999999999964 4899999
Q ss_pred ecCCCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC-----------------CCCc
Q psy11190 154 SSIMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN-----------------APLE 216 (248)
Q Consensus 154 ss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~-----------------~~~~ 216 (248)
||..+..+. +++..|+++|+|+.+|+++|+.|++++||+||+|+||+++|++.... ....
T Consensus 147 sS~~~~~~~---~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~ 223 (258)
T PRK07370 147 TYLGGVRAI---PNYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGGILDMIHHVEEKAPLRRTVT 223 (258)
T ss_pred eccccccCC---cccchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhccccchhhhhhhhhcCCcCcCCC
Confidence 999887765 77889999999999999999999999999999999999999975311 1246
Q ss_pred hhhHHHHHHHHhhhcccccccceeeeCCee
Q psy11190 217 VGAATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
|+|++..+++++++.....+|+.+..||..
T Consensus 224 ~~dva~~~~fl~s~~~~~~tG~~i~vdgg~ 253 (258)
T PRK07370 224 QTEVGNTAAFLLSDLASGITGQTIYVDAGY 253 (258)
T ss_pred HHHHHHHHHHHhChhhccccCcEEEECCcc
Confidence 899999999999988889999999999863
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-38 Score=261.54 Aligned_cols=225 Identities=20% Similarity=0.265 Sum_probs=194.9
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHH-hhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALA-QQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|++|||||++|||++++++|+++| ++|++++|+.++++++.+.. ..+.++.++++|++|.++ ++++++++.+.+
T Consensus 10 k~vlVtGas~gIG~~ia~~l~~~G----~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~~ 84 (253)
T PRK05867 10 KRALITGASTGIGKRVALAYVEAG----AQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQ-VTSMLDQVTAEL 84 (253)
T ss_pred CEEEEECCCchHHHHHHHHHHHCC----CEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHH-HHHHHHHHHHHh
Confidence 789999999999999999999999 89999999988877774433 334578889999999999 999999999988
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+ ++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|.++. ..++|+++||..+..
T Consensus 85 g--~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~----------~~g~iv~~sS~~~~~ 151 (253)
T PRK05867 85 G--GIDIAVCNAGIITV-TPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQG----------QGGVIINTASMSGHI 151 (253)
T ss_pred C--CCCEEEECCCCCCC-CChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcC----------CCcEEEEECcHHhcC
Confidence 7 59999999998765 6677789999999999999999999999999997742 357899999988764
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC--------------CCCchhhHHHHHHH
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN--------------APLEVGAATAGIIQ 226 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~--------------~~~~~~~~~~~~~~ 226 (248)
... ...+..|+++|+++++|+++++.|++++||+||+|+||+++|++.... ...+|+++++.+++
T Consensus 152 ~~~-~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~r~~~p~~va~~~~~ 230 (253)
T PRK05867 152 INV-PQQVSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPYTEYQPLWEPKIPLGRLGRPEELAGLYLY 230 (253)
T ss_pred CCC-CCCccchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccchHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 321 024578999999999999999999999999999999999999986431 13579999999999
Q ss_pred HhhhcccccccceeeeCCe
Q psy11190 227 FIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 227 ~~~~~~~~~~g~~~~~~g~ 245 (248)
++++.....+|+.+..||.
T Consensus 231 L~s~~~~~~tG~~i~vdgG 249 (253)
T PRK05867 231 LASEASSYMTGSDIVIDGG 249 (253)
T ss_pred HcCcccCCcCCCeEEECCC
Confidence 9998889999999999986
|
|
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-38 Score=262.28 Aligned_cols=221 Identities=17% Similarity=0.178 Sum_probs=188.5
Q ss_pred ceEEEecCC--CchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhh--cCCceeEEeeccCCchhhhhHHHHhh
Q psy11190 2 KSILITGCN--RGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQ--HSNLHVIELDVTDFSKQQDVLFKDIS 77 (248)
Q Consensus 2 k~~lVtGas--~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~v~~~~~~i~ 77 (248)
|+++||||+ +|||+++|++|+++| ++|++.+|+....+.+.++... ..++.++++|++|.++ ++.+++++.
T Consensus 8 k~~lItGa~~s~GIG~aia~~la~~G----~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~-v~~~~~~~~ 82 (257)
T PRK08594 8 KTYVVMGVANKRSIAWGIARSLHNAG----AKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEE-ITACFETIK 82 (257)
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHCC----CEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHH-HHHHHHHHH
Confidence 789999997 899999999999999 8999998764332323222221 3568889999999999 999999999
Q ss_pred hhhcCCCccEEEeccccCCc---cccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEee
Q psy11190 78 DVVKDQGLNVLVNNAGIAAK---FTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVS 154 (248)
Q Consensus 78 ~~~~~~~iD~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vs 154 (248)
+.++ ++|++|||||+... ..++.+.+.++|++.+++|+.+++++++.++|.|.+ .|+||++|
T Consensus 83 ~~~g--~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-------------~g~Iv~is 147 (257)
T PRK08594 83 EEVG--VIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTE-------------GGSIVTLT 147 (257)
T ss_pred HhCC--CccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhccc-------------CceEEEEc
Confidence 9887 69999999997642 245677889999999999999999999999999853 58999999
Q ss_pred cCCCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC-----------------CCCCch
Q psy11190 155 SIMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS-----------------NAPLEV 217 (248)
Q Consensus 155 s~~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~-----------------~~~~~~ 217 (248)
|..+..+. +.+..|+++|+|+.+|+++|+.|++++|||||+|+||+++|++... ....+|
T Consensus 148 S~~~~~~~---~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p 224 (257)
T PRK08594 148 YLGGERVV---QNYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGGFNSILKEIEERAPLRRTTTQ 224 (257)
T ss_pred ccCCccCC---CCCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhccccHHHHHHhhcCCccccCCH
Confidence 99988766 7778999999999999999999999999999999999999986421 013579
Q ss_pred hhHHHHHHHHhhhcccccccceeeeCCe
Q psy11190 218 GAATAGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
++++..+++++++.+...+|+.+.+||.
T Consensus 225 ~~va~~~~~l~s~~~~~~tG~~~~~dgg 252 (257)
T PRK08594 225 EEVGDTAAFLFSDLSRGVTGENIHVDSG 252 (257)
T ss_pred HHHHHHHHHHcCcccccccceEEEECCc
Confidence 9999999999998888999999999986
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-38 Score=262.47 Aligned_cols=223 Identities=22% Similarity=0.266 Sum_probs=196.1
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhh---cCCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQ---HSNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
|+++||||++|||++++++|+++| ++|++++|+.++++++.+.+.. ..++.++++|++|.++ +..+++++.+
T Consensus 8 k~vlVtGas~gIG~~~a~~l~~~G----~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-~~~~~~~~~~ 82 (260)
T PRK07063 8 KVALVTGAAQGIGAAIARAFAREG----AAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAAS-VAAAVAAAEE 82 (260)
T ss_pred CEEEEECCCchHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHH-HHHHHHHHHH
Confidence 789999999999999999999999 8999999998887777444332 4468899999999999 9999999999
Q ss_pred hhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 79 VVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
.++ ++|+||||||.... ....+.+.++|++.+++|+.++++++++++|.|.++ +.++||++||..+
T Consensus 83 ~~g--~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----------~~g~iv~isS~~~ 148 (260)
T PRK07063 83 AFG--PLDVLVNNAGINVF-ADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVER-----------GRGSIVNIASTHA 148 (260)
T ss_pred HhC--CCcEEEECCCcCCC-CChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhh-----------CCeEEEEECChhh
Confidence 887 59999999997654 555677889999999999999999999999999875 5689999999988
Q ss_pred cccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC---------------------CCCch
Q psy11190 159 SIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN---------------------APLEV 217 (248)
Q Consensus 159 ~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~---------------------~~~~~ 217 (248)
..+. +++..|+++|+++.+|+++++.|++++|||||+|+||+++|++.... ...+|
T Consensus 149 ~~~~---~~~~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 225 (260)
T PRK07063 149 FKII---PGCFPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQPMKRIGRP 225 (260)
T ss_pred ccCC---CCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcCCCCCCCCH
Confidence 7766 77889999999999999999999999999999999999999985311 02479
Q ss_pred hhHHHHHHHHhhhcccccccceeeeCCee
Q psy11190 218 GAATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
++++..+++++++.....+|+.+..||..
T Consensus 226 ~~va~~~~fl~s~~~~~itG~~i~vdgg~ 254 (260)
T PRK07063 226 EEVAMTAVFLASDEAPFINATCITIDGGR 254 (260)
T ss_pred HHHHHHHHHHcCccccccCCcEEEECCCe
Confidence 99999999999988889999999999863
|
|
| >KOG1201|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-38 Score=257.35 Aligned_cols=207 Identities=28% Similarity=0.325 Sum_probs=190.5
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
+++|||||++|||+++|.+|+++| +.+++.+.|.+..+++.+..+..++++.+.||+++.++ +.++.+++++..|
T Consensus 39 ~~vLITGgg~GlGr~ialefa~rg----~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~ee-i~~~a~~Vk~e~G 113 (300)
T KOG1201|consen 39 EIVLITGGGSGLGRLIALEFAKRG----AKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREE-IYRLAKKVKKEVG 113 (300)
T ss_pred CEEEEeCCCchHHHHHHHHHHHhC----CeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHH-HHHHHHHHHHhcC
Confidence 589999999999999999999999 89999999999988886666554689999999999999 9999999999998
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
.+|+||||||+... +.+.+.+.+++++++++|+.++|..+++|+|.|.+. ++|+||+++|.+|..+
T Consensus 114 --~V~ILVNNAGI~~~-~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~-----------~~GHIV~IaS~aG~~g 179 (300)
T KOG1201|consen 114 --DVDILVNNAGIVTG-KKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLEN-----------NNGHIVTIASVAGLFG 179 (300)
T ss_pred --CceEEEeccccccC-CCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhc-----------CCceEEEehhhhcccC
Confidence 59999999999986 888889999999999999999999999999999986 7999999999999999
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhcc---CCCeEEEEecCcceecCCCCC-------CCCCchhhHHHHHHHHhhh
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLK---GDKIIATAMHPGWVKTDMGGS-------NAPLEVGAATAGIIQFIQS 230 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~---~~~i~v~~v~PG~v~t~~~~~-------~~~~~~~~~~~~~~~~~~~ 230 (248)
. ++...|++||+|+.+|.++|..|+. .+||+.+.|+|+.++|+|... .+.++|+.+++.++..+..
T Consensus 180 ~---~gl~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgmf~~~~~~~~l~P~L~p~~va~~Iv~ai~~ 255 (300)
T KOG1201|consen 180 P---AGLADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGMFDGATPFPTLAPLLEPEYVAKRIVEAILT 255 (300)
T ss_pred C---ccchhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccccCCCCCCccccCCCCHHHHHHHHHHHHHc
Confidence 8 8999999999999999999999995 567999999999999999763 2367899999999988765
|
|
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-38 Score=261.02 Aligned_cols=222 Identities=23% Similarity=0.248 Sum_probs=184.4
Q ss_pred ceEEEecC--CCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGC--NRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGa--s~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|+++|||| ++|||+++|++|+++| ++|++.+|.....+.+.++....+...++++|++|.++ ++.+++.+.+.
T Consensus 7 k~vlItGas~~~GIG~a~a~~l~~~G----~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~-v~~~~~~~~~~ 81 (260)
T PRK06997 7 KRILITGLLSNRSIAYGIAKACKREG----AELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQ-IDALFASLGQH 81 (260)
T ss_pred cEEEEeCCCCCCcHHHHHHHHHHHCC----CeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHH-HHHHHHHHHHH
Confidence 78999996 6899999999999999 89999865422222233333222334578999999999 99999999998
Q ss_pred hcCCCccEEEeccccCCcc----ccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeec
Q psy11190 80 VKDQGLNVLVNNAGIAAKF----TRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSS 155 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss 155 (248)
++ ++|+||||||..... ..+++.+.++|++.+++|+.++++++++++|+|. ..|+||++||
T Consensus 82 ~g--~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~-------------~~g~Ii~iss 146 (260)
T PRK06997 82 WD--GLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLS-------------DDASLLTLSY 146 (260)
T ss_pred hC--CCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcC-------------CCceEEEEec
Confidence 87 699999999986431 1235678899999999999999999999999993 3578999999
Q ss_pred CCCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC-----------------CCCchh
Q psy11190 156 IMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN-----------------APLEVG 218 (248)
Q Consensus 156 ~~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~-----------------~~~~~~ 218 (248)
..+..+. +++..|+++|+|+.+|+++|+.|++++|||||+|+||+++|++.... ...+|+
T Consensus 147 ~~~~~~~---~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pe 223 (260)
T PRK06997 147 LGAERVV---PNYNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIKDFGKILDFVESNAPLRRNVTIE 223 (260)
T ss_pred cccccCC---CCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccccchhhHHHHHHhcCcccccCCHH
Confidence 9887665 77889999999999999999999999999999999999999874311 124799
Q ss_pred hHHHHHHHHhhhcccccccceeeeCCee
Q psy11190 219 AATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
++++.+++++++.+...+|+.+.+||..
T Consensus 224 dva~~~~~l~s~~~~~itG~~i~vdgg~ 251 (260)
T PRK06997 224 EVGNVAAFLLSDLASGVTGEITHVDSGF 251 (260)
T ss_pred HHHHHHHHHhCccccCcceeEEEEcCCh
Confidence 9999999999988889999999999863
|
|
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-38 Score=265.08 Aligned_cols=229 Identities=20% Similarity=0.264 Sum_probs=194.9
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCc---------hhHHHHH-HHHhhcCCceeEEeeccCCchhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNK---------DKAVELL-ALAQQHSNLHVIELDVTDFSKQQDV 71 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~---------~~~~~~~-~~~~~~~~~~~~~~D~~~~~~~v~~ 71 (248)
|++|||||++|||+++|++|+++| ++|++++++. +.++++. ++...+.++.++++|++|.++ +..
T Consensus 7 k~~lITGas~GIG~aia~~la~~G----~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~-v~~ 81 (286)
T PRK07791 7 RVVIVTGAGGGIGRAHALAFAAEG----ARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDG-AAN 81 (286)
T ss_pred CEEEEECCCchHHHHHHHHHHHCC----CEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHH-HHH
Confidence 789999999999999999999999 8999998875 5555553 333334578889999999999 999
Q ss_pred HHHHhhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEE
Q psy11190 72 LFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIV 151 (248)
Q Consensus 72 ~~~~i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv 151 (248)
+++++.+.++ ++|+||||||+... .++.+.+.++|++.+++|+.+++++++.++|.|.++.... ....|+||
T Consensus 82 ~~~~~~~~~g--~id~lv~nAG~~~~-~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~-----~~~~g~Iv 153 (286)
T PRK07791 82 LVDAAVETFG--GLDVLVNNAGILRD-RMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAG-----RAVDARII 153 (286)
T ss_pred HHHHHHHhcC--CCCEEEECCCCCCC-CCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccC-----CCCCcEEE
Confidence 9999998887 59999999998765 6778889999999999999999999999999997642100 00247999
Q ss_pred EeecCCCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC-------------CCCchh
Q psy11190 152 NVSSIMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN-------------APLEVG 218 (248)
Q Consensus 152 ~vss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~-------------~~~~~~ 218 (248)
++||.++..+. +++..|+++|+++.+|+++|+.|++++|||||+|+|| ++|+|.... ...+|+
T Consensus 154 ~isS~~~~~~~---~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~~~~~~~~~~~~~~~~~~~~~pe 229 (286)
T PRK07791 154 NTSSGAGLQGS---VGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMTETVFAEMMAKPEEGEFDAMAPE 229 (286)
T ss_pred EeCchhhCcCC---CCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcchhhHHHHHhcCcccccCCCCHH
Confidence 99999998877 7889999999999999999999999999999999999 789875321 135899
Q ss_pred hHHHHHHHHhhhcccccccceeeeCCeec
Q psy11190 219 AATAGIIQFIQSLGEAHNGGFFEYTGKAI 247 (248)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~g~~~~~~g~~~ 247 (248)
++++.++++++......+|+++.+||..+
T Consensus 230 dva~~~~~L~s~~~~~itG~~i~vdgG~~ 258 (286)
T PRK07791 230 NVSPLVVWLGSAESRDVTGKVFEVEGGKI 258 (286)
T ss_pred HHHHHHHHHhCchhcCCCCcEEEEcCCce
Confidence 99999999998888889999999998653
|
|
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-37 Score=260.81 Aligned_cols=220 Identities=17% Similarity=0.223 Sum_probs=185.5
Q ss_pred ceEEEecCCC--chhHHHHHHHHhCCCCCCceEEEeecCchhHHH-HHHHHhhcCCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 2 KSILITGCNR--GLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVE-LLALAQQHSNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 2 k~~lVtGas~--giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
|+++||||++ |||+++|+.|+++| ++|++.+|+. +.++ +.++....+.+.++++|++|.++ ++.+++++.+
T Consensus 7 k~~lITGas~~~GIG~aia~~la~~G----~~vil~~r~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-v~~~~~~~~~ 80 (262)
T PRK07984 7 KRILVTGVASKLSIAYGIAQAMHREG----AELAFTYQND-KLKGRVEEFAAQLGSDIVLPCDVAEDAS-IDAMFAELGK 80 (262)
T ss_pred CEEEEeCCCCCccHHHHHHHHHHHCC----CEEEEEecch-hHHHHHHHHHhccCCceEeecCCCCHHH-HHHHHHHHHh
Confidence 7899999996 99999999999999 8999999873 3333 23443334556789999999999 9999999998
Q ss_pred hhcCCCccEEEeccccCCcc----ccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEee
Q psy11190 79 VVKDQGLNVLVNNAGIAAKF----TRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVS 154 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vs 154 (248)
.++ ++|+||||||+.... ..+.+.+.++|++.+++|+.+++.+++.++|.+. .+|+|+++|
T Consensus 81 ~~g--~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-------------~~g~Iv~is 145 (262)
T PRK07984 81 VWP--KFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLN-------------PGSALLTLS 145 (262)
T ss_pred hcC--CCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhc-------------CCcEEEEEe
Confidence 887 599999999975431 1145678899999999999999999999988663 247899999
Q ss_pred cCCCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC-----------------CCCch
Q psy11190 155 SIMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN-----------------APLEV 217 (248)
Q Consensus 155 s~~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~-----------------~~~~~ 217 (248)
|..+..+. +.+..|+++|+|+.+|+++++.|++++|||||+|+||+++|++.... ....|
T Consensus 146 s~~~~~~~---~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p 222 (262)
T PRK07984 146 YLGAERAI---PNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTI 222 (262)
T ss_pred cCCCCCCC---CCcchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcCCchHHHHHHHHHcCCCcCCCCH
Confidence 98887655 77889999999999999999999999999999999999999864310 13479
Q ss_pred hhHHHHHHHHhhhcccccccceeeeCCe
Q psy11190 218 GAATAGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
++++..+++++++.....+|+.+..+|.
T Consensus 223 edva~~~~~L~s~~~~~itG~~i~vdgg 250 (262)
T PRK07984 223 EDVGNSAAFLCSDLSAGISGEVVHVDGG 250 (262)
T ss_pred HHHHHHHHHHcCcccccccCcEEEECCC
Confidence 9999999999998888899999999986
|
|
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-37 Score=258.48 Aligned_cols=223 Identities=19% Similarity=0.281 Sum_probs=195.3
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHH-hh--cCCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALA-QQ--HSNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~-~~--~~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
|+++||||++|||++++++|+++| ++|++++|+.+++++..+.. .. ..++.++++|++|.++ ++++++++.+
T Consensus 9 k~~lItGas~giG~~ia~~l~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-v~~~~~~~~~ 83 (265)
T PRK07062 9 RVAVVTGGSSGIGLATVELLLEAG----ASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEAD-VAAFAAAVEA 83 (265)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC----CeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHH-HHHHHHHHHH
Confidence 689999999999999999999999 89999999988877764333 22 2367889999999999 9999999998
Q ss_pred hhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 79 VVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
.++ ++|+||||||.... .++.+.+.++|++.+++|+.+++.+++.++|.|+++ +.|+|+++||..+
T Consensus 84 ~~g--~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----------~~g~iv~isS~~~ 149 (265)
T PRK07062 84 RFG--GVDMLVNNAGQGRV-STFADTTDDAWRDELELKYFSVINPTRAFLPLLRAS-----------AAASIVCVNSLLA 149 (265)
T ss_pred hcC--CCCEEEECCCCCCC-CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcc-----------CCcEEEEeccccc
Confidence 887 59999999998654 677788999999999999999999999999999875 4689999999998
Q ss_pred cccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC--------------------------
Q psy11190 159 SIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN-------------------------- 212 (248)
Q Consensus 159 ~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~-------------------------- 212 (248)
..+. +....|+++|+++.+|+++++.|+.++||+||+|+||+++|++....
T Consensus 150 ~~~~---~~~~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 226 (265)
T PRK07062 150 LQPE---PHMVATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIPL 226 (265)
T ss_pred cCCC---CCchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCCCCc
Confidence 8776 77889999999999999999999999999999999999999974310
Q ss_pred -CCCchhhHHHHHHHHhhhcccccccceeeeCCee
Q psy11190 213 -APLEVGAATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 213 -~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
...+|++++..+..++++.....+|+.+..||..
T Consensus 227 ~r~~~p~~va~~~~~L~s~~~~~~tG~~i~vdgg~ 261 (265)
T PRK07062 227 GRLGRPDEAARALFFLASPLSSYTTGSHIDVSGGF 261 (265)
T ss_pred CCCCCHHHHHHHHHHHhCchhcccccceEEEcCce
Confidence 1247899999999998887889999999999863
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-37 Score=254.71 Aligned_cols=226 Identities=20% Similarity=0.227 Sum_probs=194.3
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchh-HHHHHH-HHhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDK-AVELLA-LAQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~-~~~~~~-~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|+++||||++|||+++|++|+++| ++|++++|+.++ ++++.+ +...+.++.++++|++|+++ ++.+++++.+.
T Consensus 9 k~~lVtG~s~gIG~~ia~~l~~~G----~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~-i~~~~~~~~~~ 83 (254)
T PRK06114 9 QVAFVTGAGSGIGQRIAIGLAQAG----ADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKAD-LRAAVARTEAE 83 (254)
T ss_pred CEEEEECCCchHHHHHHHHHHHCC----CEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHH-HHHHHHHHHHH
Confidence 789999999999999999999999 899999997643 454533 33334578889999999999 99999999988
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
++ ++|+||||||.... .++.+.+.++|++.+++|+.++++++++++|.|.++ +.++||++||..+.
T Consensus 84 ~g--~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----------~~~~iv~isS~~~~ 149 (254)
T PRK06114 84 LG--ALTLAVNAAGIANA-NPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLEN-----------GGGSIVNIASMSGI 149 (254)
T ss_pred cC--CCCEEEECCCCCCC-CChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhc-----------CCcEEEEECchhhc
Confidence 87 59999999998765 667788999999999999999999999999999875 57899999999987
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC----------------CCCchhhHHHH
Q psy11190 160 IEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN----------------APLEVGAATAG 223 (248)
Q Consensus 160 ~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~----------------~~~~~~~~~~~ 223 (248)
.+.+. ..+..|+++|+++++|+++++.|+.++||+||+|.||+++|+|.... ...+|++++..
T Consensus 150 ~~~~~-~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~ 228 (254)
T PRK06114 150 IVNRG-LLQAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRPEMVHQTKLFEEQTPMQRMAKVDEMVGP 228 (254)
T ss_pred CCCCC-CCcchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccccchHHHHHHHhcCCCCCCcCHHHHHHH
Confidence 66411 23678999999999999999999999999999999999999986421 12468999999
Q ss_pred HHHHhhhcccccccceeeeCCeec
Q psy11190 224 IIQFIQSLGEAHNGGFFEYTGKAI 247 (248)
Q Consensus 224 ~~~~~~~~~~~~~g~~~~~~g~~~ 247 (248)
+++++++.....+|+.+..||...
T Consensus 229 ~~~l~s~~~~~~tG~~i~~dgg~~ 252 (254)
T PRK06114 229 AVFLLSDAASFCTGVDLLVDGGFV 252 (254)
T ss_pred HHHHcCccccCcCCceEEECcCEe
Confidence 999999888999999999998753
|
|
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-37 Score=260.36 Aligned_cols=222 Identities=16% Similarity=0.151 Sum_probs=185.6
Q ss_pred CceEEEecC--CCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhh----------cC----CceeEEeec--
Q psy11190 1 MKSILITGC--NRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQ----------HS----NLHVIELDV-- 62 (248)
Q Consensus 1 ~k~~lVtGa--s~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~----------~~----~~~~~~~D~-- 62 (248)
.|++||||| ++|||+++|+.|+++| ++|++ +|+.++++++...... .+ ....+.+|+
T Consensus 9 gk~alITGa~~s~GIG~a~A~~la~~G----a~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 83 (303)
T PLN02730 9 GKRAFIAGVADDNGYGWAIAKALAAAG----AEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVF 83 (303)
T ss_pred CCEEEEeCCCCCCcHHHHHHHHHHHCC----CEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceec
Confidence 379999999 8999999999999999 89998 7887777766322211 01 146788999
Q ss_pred cCCc------------------hhhhhHHHHhhhhhcCCCccEEEeccccCCc-cccCCCCChhhhhheeeecchhhHHH
Q psy11190 63 TDFS------------------KQQDVLFKDISDVVKDQGLNVLVNNAGIAAK-FTRLGLLKPEQMTDHFLVNVTAPLML 123 (248)
Q Consensus 63 ~~~~------------------~~v~~~~~~i~~~~~~~~iD~lv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l 123 (248)
++.+ + ++.+++++.+.+| ++|+||||||.... ..++.+.+.++|++.+++|+.+++++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~-v~~l~~~i~~~~G--~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l 160 (303)
T PLN02730 84 DTPEDVPEDVKTNKRYAGSSNWT-VQEVAESVKADFG--SIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSL 160 (303)
T ss_pred CccccCchhhhcccccccCCHHH-HHHHHHHHHHHcC--CCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHH
Confidence 4444 6 8999999999887 69999999985432 26778899999999999999999999
Q ss_pred HHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcccccCCCCC-ccchhhHHHHHHHHHHHHhhccC-CCeEEEEecC
Q psy11190 124 TKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGF-HPYRCSKAALNAATRSLSIDLKG-DKIIATAMHP 201 (248)
Q Consensus 124 ~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~~~~~~~~-~~y~~sK~a~~~~~~~la~e~~~-~~i~v~~v~P 201 (248)
++.++|.|.+ .|+||++||..+..+. +++ ..|+++|+|+.+|+++|+.|+++ +|||||+|+|
T Consensus 161 ~~~~~p~m~~-------------~G~II~isS~a~~~~~---p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~P 224 (303)
T PLN02730 161 LQHFGPIMNP-------------GGASISLTYIASERII---PGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISA 224 (303)
T ss_pred HHHHHHHHhc-------------CCEEEEEechhhcCCC---CCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEee
Confidence 9999999964 4899999999987765 544 47999999999999999999986 7999999999
Q ss_pred cceecCCCCCC-----------------CCCchhhHHHHHHHHhhhcccccccceeeeCCee
Q psy11190 202 GWVKTDMGGSN-----------------APLEVGAATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 202 G~v~t~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
|+++|+|.... ....|++++..+++++++.....+|+.+..+|..
T Consensus 225 G~v~T~~~~~~~~~~~~~~~~~~~~pl~r~~~peevA~~~~fLaS~~a~~itG~~l~vdGG~ 286 (303)
T PLN02730 225 GPLGSRAAKAIGFIDDMIEYSYANAPLQKELTADEVGNAAAFLASPLASAITGATIYVDNGL 286 (303)
T ss_pred CCccCchhhcccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCCEEEECCCc
Confidence 99999986421 1247999999999999988888999999988863
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-37 Score=256.33 Aligned_cols=223 Identities=18% Similarity=0.234 Sum_probs=190.5
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeec-CchhHHHHHHHHh-h-cCCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCR-NKDKAVELLALAQ-Q-HSNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r-~~~~~~~~~~~~~-~-~~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
|+++||||++|||+++|++|+++| ++|++++| +.+.++.+.+... . +.++.++++|++|.++ ++++++++.+
T Consensus 9 k~vlItGas~gIG~~ia~~l~~~G----~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~ 83 (260)
T PRK08416 9 KTLVISGGTRGIGKAIVYEFAQSG----VNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPET-YKELFKKIDE 83 (260)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC----CEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHH-HHHHHHHHHH
Confidence 799999999999999999999999 88988865 5555555533322 2 3478899999999999 9999999998
Q ss_pred hhcCCCccEEEeccccCCc-----cccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEe
Q psy11190 79 VVKDQGLNVLVNNAGIAAK-----FTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNV 153 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~-----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~v 153 (248)
.++ ++|+||||||.... ..++.+.+.+++++.+++|+.+++.+++.++|.|.++ +.++||++
T Consensus 84 ~~g--~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----------~~g~iv~i 150 (260)
T PRK08416 84 DFD--RVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKV-----------GGGSIISL 150 (260)
T ss_pred hcC--CccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhcc-----------CCEEEEEE
Confidence 887 59999999986531 2456677889999999999999999999999999874 46899999
Q ss_pred ecCCCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC-----------------CCCc
Q psy11190 154 SSIMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN-----------------APLE 216 (248)
Q Consensus 154 ss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~-----------------~~~~ 216 (248)
||..+..+. +++..|+++|+++++|+++|+.|++++||+||+|+||+++|++.+.. ...+
T Consensus 151 sS~~~~~~~---~~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~r~~~ 227 (260)
T PRK08416 151 SSTGNLVYI---ENYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTNYEEVKAKTEELSPLNRMGQ 227 (260)
T ss_pred eccccccCC---CCcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccCCHHHHHHHHhcCCCCCCCC
Confidence 999887666 77889999999999999999999999999999999999999985421 1357
Q ss_pred hhhHHHHHHHHhhhcccccccceeeeCCe
Q psy11190 217 VGAATAGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
|++++..++.++++.....+|+.+..+|.
T Consensus 228 p~~va~~~~~l~~~~~~~~~G~~i~vdgg 256 (260)
T PRK08416 228 PEDLAGACLFLCSEKASWLTGQTIVVDGG 256 (260)
T ss_pred HHHHHHHHHHHcChhhhcccCcEEEEcCC
Confidence 99999999999988778899999999885
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=254.03 Aligned_cols=224 Identities=19% Similarity=0.209 Sum_probs=193.6
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhcC
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVKD 82 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~~ 82 (248)
+++||||++|||++++++|+++| ++|++++|+.+.+++..+.+...+++.++++|++|.++ ++++++++.+.++
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G----~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~-~~~~~~~~~~~~g- 75 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKG----ARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDD-LKNLVKEAWELLG- 75 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcC----CEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHH-HHHHHHHHHHhcC-
Confidence 69999999999999999999999 89999999988877775444444578899999999999 9999999998877
Q ss_pred CCccEEEeccccCCc-cccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 83 QGLNVLVNNAGIAAK-FTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 83 ~~iD~lv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+||||||.... ..++.+.+.++|.+.+.+|+.+++.+++.++|.|.+.. +.|+||++||..+..+
T Consensus 76 -~id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~----------~~g~iv~isS~~~~~~ 144 (259)
T PRK08340 76 -GIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKK----------MKGVLVYLSSVSVKEP 144 (259)
T ss_pred -CCCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcC----------CCCEEEEEeCcccCCC
Confidence 59999999997532 24566778899999999999999999999999886421 4689999999998766
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC---------------------------CCC
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS---------------------------NAP 214 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~---------------------------~~~ 214 (248)
. ++...|+++|+++.+|+++|+.++.++||+||+|+||+++|++.+. ...
T Consensus 145 ~---~~~~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~ 221 (259)
T PRK08340 145 M---PPLVLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLERTPLKRT 221 (259)
T ss_pred C---CCchHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhccCCccCC
Confidence 5 7788999999999999999999999999999999999999997531 012
Q ss_pred CchhhHHHHHHHHhhhcccccccceeeeCCee
Q psy11190 215 LEVGAATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
.+|+|+++.+.+++++.....+|+.+..||..
T Consensus 222 ~~p~dva~~~~fL~s~~~~~itG~~i~vdgg~ 253 (259)
T PRK08340 222 GRWEELGSLIAFLLSENAEYMLGSTIVFDGAM 253 (259)
T ss_pred CCHHHHHHHHHHHcCcccccccCceEeecCCc
Confidence 46899999999999998899999999999864
|
|
| >KOG0725|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=253.92 Aligned_cols=224 Identities=25% Similarity=0.277 Sum_probs=191.2
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHH-Hhh---cCCceeEEeeccCCchhhhhHHHHh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLAL-AQQ---HSNLHVIELDVTDFSKQQDVLFKDI 76 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~-~~~---~~~~~~~~~D~~~~~~~v~~~~~~i 76 (248)
+|++||||+++|||+++|++|++.| ++|++++|+.+.+++.... ... ..++..+.+|+++.++ ++.+++..
T Consensus 8 gkvalVTG~s~GIG~aia~~la~~G----a~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~l~~~~ 82 (270)
T KOG0725|consen 8 GKVALVTGGSSGIGKAIALLLAKAG----AKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVD-VEKLVEFA 82 (270)
T ss_pred CcEEEEECCCChHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHH-HHHHHHHH
Confidence 4799999999999999999999999 9999999999998887443 322 3368999999999999 89999888
Q ss_pred hhh-hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchh-hHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEee
Q psy11190 77 SDV-VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTA-PLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVS 154 (248)
Q Consensus 77 ~~~-~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~-~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vs 154 (248)
.+. +| ++|+||||||......++.+.+.|+|++.+++|+.| .+++.+.+.+.+.++ ..+.|+++|
T Consensus 83 ~~~~~G--kidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~-----------~gg~I~~~s 149 (270)
T KOG0725|consen 83 VEKFFG--KIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKS-----------KGGSIVNIS 149 (270)
T ss_pred HHHhCC--CCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhc-----------CCceEEEEe
Confidence 888 56 699999999998764578999999999999999995 555666666667664 688999999
Q ss_pred cCCCcccccCCCCC-ccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC------------------C---
Q psy11190 155 SIMGSIEDNTQGGF-HPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS------------------N--- 212 (248)
Q Consensus 155 s~~~~~~~~~~~~~-~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~------------------~--- 212 (248)
|..+..+. .+. ..|+++|+++++|++++|.||.++|||||+|+||.+.|++... .
T Consensus 150 s~~~~~~~---~~~~~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~p~ 226 (270)
T KOG0725|consen 150 SVAGVGPG---PGSGVAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKEATDSKGAVPL 226 (270)
T ss_pred ccccccCC---CCCcccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccccccchhhHHhhhhcccccccc
Confidence 99988765 334 7999999999999999999999999999999999999997210 0
Q ss_pred -CCCchhhHHHHHHHHhhhcccccccceeeeCCe
Q psy11190 213 -APLEVGAATAGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 213 -~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
....|+|++..+..+.++.....+|+.+..||.
T Consensus 227 gr~g~~~eva~~~~fla~~~asyitG~~i~vdgG 260 (270)
T KOG0725|consen 227 GRVGTPEEVAEAAAFLASDDASYITGQTIIVDGG 260 (270)
T ss_pred CCccCHHHHHHhHHhhcCcccccccCCEEEEeCC
Confidence 135799999999999988766999999998885
|
|
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-37 Score=256.09 Aligned_cols=219 Identities=21% Similarity=0.246 Sum_probs=183.6
Q ss_pred ceEEEecC--CCchhHHHHHHHHhCCCCCCceEEEeecCc--hhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhh
Q psy11190 2 KSILITGC--NRGLGLGMIKVLVGLGNNQPAHIFATCRNK--DKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDIS 77 (248)
Q Consensus 2 k~~lVtGa--s~giG~~ia~~l~~~g~~~~~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~ 77 (248)
|+++|||| ++|||+++|++|+++| ++|++.+|+. +.++++.+.. ..++.++++|++|.++ ++.+++++.
T Consensus 8 k~~lItGa~~s~GIG~a~a~~la~~G----~~v~l~~r~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~-i~~~~~~~~ 80 (256)
T PRK07889 8 KRILVTGVITDSSIAFHVARVAQEQG----AEVVLTGFGRALRLTERIAKRL--PEPAPVLELDVTNEEH-LASLADRVR 80 (256)
T ss_pred CEEEEeCCCCcchHHHHHHHHHHHCC----CEEEEecCccchhHHHHHHHhc--CCCCcEEeCCCCCHHH-HHHHHHHHH
Confidence 78999999 8999999999999999 8999999864 2233333222 2367789999999999 999999999
Q ss_pred hhhcCCCccEEEeccccCCcc---ccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEee
Q psy11190 78 DVVKDQGLNVLVNNAGIAAKF---TRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVS 154 (248)
Q Consensus 78 ~~~~~~~iD~lv~~ag~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vs 154 (248)
+.++ ++|+||||||+.... .++.+.+.++|++.+++|+.+++++++.++|.|.+ .|+|++++
T Consensus 81 ~~~g--~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~-------------~g~Iv~is 145 (256)
T PRK07889 81 EHVD--GLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNE-------------GGSIVGLD 145 (256)
T ss_pred HHcC--CCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhccc-------------CceEEEEe
Confidence 8877 599999999986431 34667788999999999999999999999999963 47899998
Q ss_pred cCCCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC------------------CCCc
Q psy11190 155 SIMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN------------------APLE 216 (248)
Q Consensus 155 s~~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~------------------~~~~ 216 (248)
+.. ..+. +.+..|++||+++.+|+++|+.|++++|||||+|+||+++|+|.+.. ...+
T Consensus 146 ~~~-~~~~---~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 221 (256)
T PRK07889 146 FDA-TVAW---PAYDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPGFELLEEGWDERAPLGWDVKD 221 (256)
T ss_pred ecc-cccC---CccchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccCcHHHHHHHHhcCccccccCC
Confidence 653 3333 66778999999999999999999999999999999999999975321 1357
Q ss_pred hhhHHHHHHHHhhhcccccccceeeeCCee
Q psy11190 217 VGAATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
|+++++.+++++++.....+|+++.++|..
T Consensus 222 p~evA~~v~~l~s~~~~~~tG~~i~vdgg~ 251 (256)
T PRK07889 222 PTPVARAVVALLSDWFPATTGEIVHVDGGA 251 (256)
T ss_pred HHHHHHHHHHHhCcccccccceEEEEcCce
Confidence 999999999999988888999999999864
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-37 Score=253.29 Aligned_cols=223 Identities=24% Similarity=0.354 Sum_probs=188.9
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEee-cCchhHHHHH-HHHhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATC-RNKDKAVELL-ALAQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~-r~~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|+++||||++|||++++++|+++| ++|++.. ++.++.+++. ++...+..+..+++|+++.++ +..+++++.+.
T Consensus 5 k~~lItGas~gIG~~ia~~l~~~G----~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~ 79 (252)
T PRK12747 5 KVALVTGASRGIGRAIAKRLANDG----ALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHG-VEALYSSLDNE 79 (252)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCC----CeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHH-HHHHHHHHHHH
Confidence 799999999999999999999999 8898875 5556665553 333334567889999999998 88888888764
Q ss_pred h----cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeec
Q psy11190 80 V----KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSS 155 (248)
Q Consensus 80 ~----~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss 155 (248)
+ +..++|+||||||.... .++.+.+.++|++.+++|+.+++.+++.++|.|.+ .|+||++||
T Consensus 80 ~~~~~g~~~id~lv~~Ag~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~-------------~g~iv~isS 145 (252)
T PRK12747 80 LQNRTGSTKFDILINNAGIGPG-AFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD-------------NSRIINISS 145 (252)
T ss_pred hhhhcCCCCCCEEEECCCcCCC-CCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhc-------------CCeEEEECC
Confidence 3 22259999999997643 66778889999999999999999999999999864 479999999
Q ss_pred CCCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC-----------------CCCchh
Q psy11190 156 IMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN-----------------APLEVG 218 (248)
Q Consensus 156 ~~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~-----------------~~~~~~ 218 (248)
..+..+. ++...|++||+++++|+++++.|+.++|||||+|+||+++|++.... ...+|+
T Consensus 146 ~~~~~~~---~~~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (252)
T PRK12747 146 AATRISL---PDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSDPMMKQYATTISAFNRLGEVE 222 (252)
T ss_pred cccccCC---CCchhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhcccCHHHHHHHHhcCcccCCCCHH
Confidence 9998776 77889999999999999999999999999999999999999985421 124799
Q ss_pred hHHHHHHHHhhhcccccccceeeeCCee
Q psy11190 219 AATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
++++.+..+++......+|+.+..+|..
T Consensus 223 dva~~~~~l~s~~~~~~~G~~i~vdgg~ 250 (252)
T PRK12747 223 DIADTAAFLASPDSRWVTGQLIDVSGGS 250 (252)
T ss_pred HHHHHHHHHcCccccCcCCcEEEecCCc
Confidence 9999999998887788999999999864
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-36 Score=251.54 Aligned_cols=224 Identities=21% Similarity=0.299 Sum_probs=196.8
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHH-HHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|+++||||++|||.+++++|+++| ++|++++|+.++++.+.+ +.....++.++++|+++.++ ++.+++++.+.+
T Consensus 9 k~vlItGas~gIG~~l~~~l~~~G----~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~~ 83 (252)
T PRK07035 9 KIALVTGASRGIGEAIAKLLAQQG----AHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQ-IDALFAHIRERH 83 (252)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH-HHHHHHHHHHHc
Confidence 789999999999999999999999 899999999887777643 33334567889999999999 999999999988
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+ ++|+||||||......++.+.+.+++++.+++|+.+++.++++++|.|.++ ..++|+++||..+..
T Consensus 84 ~--~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----------~~~~iv~~sS~~~~~ 150 (252)
T PRK07035 84 G--RLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQ-----------GGGSIVNVASVNGVS 150 (252)
T ss_pred C--CCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-----------CCcEEEEECchhhcC
Confidence 7 599999999975433566677899999999999999999999999999875 568999999998887
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC-----------------CCCchhhHHHH
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN-----------------APLEVGAATAG 223 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~-----------------~~~~~~~~~~~ 223 (248)
+. +++..|+++|+++++|+++++.++.++||+|++|+||+++|++.... ...+|+++++.
T Consensus 151 ~~---~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~ 227 (252)
T PRK07035 151 PG---DFQGIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKNDAILKQALAHIPLRRHAEPSEMAGA 227 (252)
T ss_pred CC---CCCcchHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCCHHHHHHHHccCCCCCcCCHHHHHHH
Confidence 66 77889999999999999999999999999999999999999985432 13579999999
Q ss_pred HHHHhhhcccccccceeeeCCee
Q psy11190 224 IIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 224 ~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
++.++++.....+|+++.++|..
T Consensus 228 ~~~l~~~~~~~~~g~~~~~dgg~ 250 (252)
T PRK07035 228 VLYLASDASSYTTGECLNVDGGY 250 (252)
T ss_pred HHHHhCccccCccCCEEEeCCCc
Confidence 99999998888999999999974
|
|
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-37 Score=260.30 Aligned_cols=222 Identities=19% Similarity=0.223 Sum_probs=182.2
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCc----------hhHHHHHHHHh-hcCCceeEEeeccCCchhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNK----------DKAVELLALAQ-QHSNLHVIELDVTDFSKQQD 70 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~----------~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~v~ 70 (248)
|+++||||++|||+++|++|+++| ++|++++|+. ++++++.+.+. .+.++.++++|+++.++ ++
T Consensus 9 k~~lITGgs~GIG~aia~~la~~G----~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~-v~ 83 (305)
T PRK08303 9 KVALVAGATRGAGRGIAVELGAAG----ATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQ-VR 83 (305)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC----CEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH-HH
Confidence 799999999999999999999999 8999999984 34444433333 23467889999999999 99
Q ss_pred hHHHHhhhhhcCCCccEEEecc-ccCC---ccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCC
Q psy11190 71 VLFKDISDVVKDQGLNVLVNNA-GIAA---KFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSS 146 (248)
Q Consensus 71 ~~~~~i~~~~~~~~iD~lv~~a-g~~~---~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~ 146 (248)
.+++++.+.++ ++|+||||| |... ...++.+.+.++|++.+++|+.++++++++++|.|.++ +
T Consensus 84 ~~~~~~~~~~g--~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~-----------~ 150 (305)
T PRK08303 84 ALVERIDREQG--RLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRR-----------P 150 (305)
T ss_pred HHHHHHHHHcC--CccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhC-----------C
Confidence 99999999887 599999999 7531 11456677889999999999999999999999999764 4
Q ss_pred CceEEEeecCCCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC---------------
Q psy11190 147 RAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS--------------- 211 (248)
Q Consensus 147 ~~~iv~vss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~--------------- 211 (248)
.|+||++||..+.....+.++...|+++|+++.+|+++|+.|++++|||||+|+||+++|+|...
T Consensus 151 ~g~IV~isS~~~~~~~~~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~ 230 (305)
T PRK08303 151 GGLVVEITDGTAEYNATHYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMMLDAFGVTEENWRDALAK 230 (305)
T ss_pred CcEEEEECCccccccCcCCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHHHhhccCccchhhhhcc
Confidence 68999999977654322224567899999999999999999999999999999999999997410
Q ss_pred CC----CCchhhHHHHHHHHhhhcc-cccccceee
Q psy11190 212 NA----PLEVGAATAGIIQFIQSLG-EAHNGGFFE 241 (248)
Q Consensus 212 ~~----~~~~~~~~~~~~~~~~~~~-~~~~g~~~~ 241 (248)
.+ ..+|++++..++.++++.. ...+|+++.
T Consensus 231 ~p~~~~~~~peevA~~v~fL~s~~~~~~itG~~l~ 265 (305)
T PRK08303 231 EPHFAISETPRYVGRAVAALAADPDVARWNGQSLS 265 (305)
T ss_pred ccccccCCCHHHHHHHHHHHHcCcchhhcCCcEEE
Confidence 01 1369999999999998764 467888875
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-36 Score=251.52 Aligned_cols=222 Identities=18% Similarity=0.238 Sum_probs=191.6
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH-HHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL-LALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|+++||||++|||++++++|+++| ++|++.+++.. ++. .++.....++..+++|++|.++ ++.+++++.+.+
T Consensus 11 k~~lItG~~~gIG~a~a~~l~~~G----~~vv~~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~-~~~~~~~~~~~~ 83 (253)
T PRK08993 11 KVAVVTGCDTGLGQGMALGLAEAG----CDIVGINIVEP--TETIEQVTALGRRFLSLTADLRKIDG-IPALLERAVAEF 83 (253)
T ss_pred CEEEEECCCchHHHHHHHHHHHCC----CEEEEecCcch--HHHHHHHHhcCCeEEEEECCCCCHHH-HHHHHHHHHHHh
Confidence 799999999999999999999999 89998877542 222 3333334568889999999999 999999999888
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+ ++|++|||||...+ .++.+.+.++|++.+++|+.++++++++++|.|.+++ ..|+||++||..+..
T Consensus 84 ~--~~D~li~~Ag~~~~-~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~----------~~g~iv~isS~~~~~ 150 (253)
T PRK08993 84 G--HIDILVNNAGLIRR-EDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQG----------NGGKIINIASMLSFQ 150 (253)
T ss_pred C--CCCEEEECCCCCCC-CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCC----------CCeEEEEECchhhcc
Confidence 7 59999999998654 6677889999999999999999999999999997742 358999999998887
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC-----------------CCCchhhHHHH
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN-----------------APLEVGAATAG 223 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~-----------------~~~~~~~~~~~ 223 (248)
+. +.+..|+++|+++++|+++++.++.++||+||.|.||+++|++.... ....|++++..
T Consensus 151 ~~---~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~eva~~ 227 (253)
T PRK08993 151 GG---IRVPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEILDRIPAGRWGLPSDLMGP 227 (253)
T ss_pred CC---CCCcchHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccchHHHHHHHhcCCCCCCcCHHHHHHH
Confidence 65 67789999999999999999999999999999999999999985421 13479999999
Q ss_pred HHHHhhhcccccccceeeeCCee
Q psy11190 224 IIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 224 ~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
+.+++++.....+|+.+.+||..
T Consensus 228 ~~~l~s~~~~~~~G~~~~~dgg~ 250 (253)
T PRK08993 228 VVFLASSASDYINGYTIAVDGGW 250 (253)
T ss_pred HHHHhCccccCccCcEEEECCCE
Confidence 99999998899999999999864
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-36 Score=251.45 Aligned_cols=223 Identities=23% Similarity=0.349 Sum_probs=196.2
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHH-hhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALA-QQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|++|||||++|||++++++|+++| ++|++.+|+.++++++.+.. ....++.++.+|++|.++ ++.+++++.+.+
T Consensus 10 k~~lItGas~giG~~ia~~L~~~G----~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~-~~~~~~~~~~~~ 84 (254)
T PRK08085 10 KNILITGSAQGIGFLLATGLAEYG----AEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQE-VEAAIEHIEKDI 84 (254)
T ss_pred CEEEEECCCChHHHHHHHHHHHcC----CEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHH-HHHHHHHHHHhc
Confidence 789999999999999999999999 89999999988877764333 334567889999999999 999999998887
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+ ++|+||||||.... .++.+.+.++|++.+++|+.+++.+++.+++.+.++ +.++||++||..+..
T Consensus 85 ~--~id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----------~~~~iv~isS~~~~~ 150 (254)
T PRK08085 85 G--PIDVLINNAGIQRR-HPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKR-----------QAGKIINICSMQSEL 150 (254)
T ss_pred C--CCCEEEECCCcCCC-CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----------CCcEEEEEccchhcc
Confidence 7 59999999998654 677788999999999999999999999999999764 468999999998877
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC-----------------CCchhhHHHH
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA-----------------PLEVGAATAG 223 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~-----------------~~~~~~~~~~ 223 (248)
+. +++..|+++|++++.|+++++.+++++||+||+|+||+++|++.+... ..+|++++..
T Consensus 151 ~~---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~ 227 (254)
T PRK08085 151 GR---DTITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTPAARWGDPQELIGA 227 (254)
T ss_pred CC---CCCcchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccCHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence 66 778899999999999999999999999999999999999999864311 2469999999
Q ss_pred HHHHhhhcccccccceeeeCCee
Q psy11190 224 IIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 224 ~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
+..++++.....+|+.+..||..
T Consensus 228 ~~~l~~~~~~~i~G~~i~~dgg~ 250 (254)
T PRK08085 228 AVFLSSKASDFVNGHLLFVDGGM 250 (254)
T ss_pred HHHHhCccccCCcCCEEEECCCe
Confidence 99999988899999999999863
|
|
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-36 Score=249.59 Aligned_cols=208 Identities=23% Similarity=0.281 Sum_probs=179.0
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhh-cC-CceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQ-HS-NLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~-~~-~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|+++||||++|||+++|++|+ +| ++|++++|+.++++++.+.... +. .+.++++|++|.++ ++.+++++.+.
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~g----~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~-v~~~~~~~~~~ 74 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-HG----EDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDT-HRELVKQTQEL 74 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-CC----CEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHH-HHHHHHHHHHh
Confidence 589999999999999999999 58 8999999999888877443332 33 47889999999999 99999999988
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
++ ++|++|||||...+ ....+.+.+.+++.+++|+.+++++++.++|.|.++. .+|+||++||.++.
T Consensus 75 ~g--~id~lv~nag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~----------~~g~Iv~isS~~~~ 141 (246)
T PRK05599 75 AG--EISLAVVAFGILGD-QERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQT----------APAAIVAFSSIAGW 141 (246)
T ss_pred cC--CCCEEEEecCcCCC-chhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcC----------CCCEEEEEeccccc
Confidence 77 59999999998654 4455566777888899999999999999999997641 25899999999998
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC----CCchhhHHHHHHHHhhhc
Q psy11190 160 IEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA----PLEVGAATAGIIQFIQSL 231 (248)
Q Consensus 160 ~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~ 231 (248)
.+. +++..|+++|+++.+|+++|+.|++++||+||+|+||+++|+|..... ..+|+++++.+++++...
T Consensus 142 ~~~---~~~~~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~~~~~~~~~~~~pe~~a~~~~~~~~~~ 214 (246)
T PRK05599 142 RAR---RANYVYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSMTTGMKPAPMSVYPRDVAAAVVSAITSS 214 (246)
T ss_pred cCC---cCCcchhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccchhhcCCCCCCCCCCHHHHHHHHHHHHhcC
Confidence 776 778899999999999999999999999999999999999999865432 258999999999999874
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-36 Score=250.65 Aligned_cols=224 Identities=23% Similarity=0.247 Sum_probs=197.3
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHH-HHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|+++||||++|||.+++++|+++| ++|++++|+.+++++..+ +...+.++.++++|+++.++ +..+++++.+.+
T Consensus 8 k~ilItGas~~iG~~ia~~l~~~G----~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-i~~~~~~~~~~~ 82 (253)
T PRK06172 8 KVALVTGGAAGIGRATALAFAREG----AKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAE-VKALVEQTIAAY 82 (253)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcC----CEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHH-HHHHHHHHHHHh
Confidence 799999999999999999999999 899999999887776643 33334578899999999998 999999999888
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+ ++|+||||||...+..++.+.+.+++++.+++|+.+++.++++++|.|.++ +.++++++||..+..
T Consensus 83 g--~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----------~~~~ii~~sS~~~~~ 149 (253)
T PRK06172 83 G--RLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQ-----------GGGAIVNTASVAGLG 149 (253)
T ss_pred C--CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----------CCcEEEEECchhhcc
Confidence 7 699999999986553457778999999999999999999999999999775 468999999999887
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC------------------CCchhhHHH
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA------------------PLEVGAATA 222 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~------------------~~~~~~~~~ 222 (248)
+. +++..|+++|+++++|+++++.++.++||+|++|+||+++|++..+.. ..+|++++.
T Consensus 150 ~~---~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ia~ 226 (253)
T PRK06172 150 AA---PKMSIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHPVGRIGKVEEVAS 226 (253)
T ss_pred CC---CCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcccChHHHHHHhccCCCCCccCHHHHHH
Confidence 76 788999999999999999999999999999999999999999865431 247999999
Q ss_pred HHHHHhhhcccccccceeeeCCee
Q psy11190 223 GIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 223 ~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
.++.++++.....+|+++.+||..
T Consensus 227 ~~~~l~~~~~~~~~G~~i~~dgg~ 250 (253)
T PRK06172 227 AVLYLCSDGASFTTGHALMVDGGA 250 (253)
T ss_pred HHHHHhCccccCcCCcEEEECCCc
Confidence 999999988889999999999853
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-36 Score=251.56 Aligned_cols=219 Identities=22% Similarity=0.267 Sum_probs=191.2
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|+++||||++|||++++++|+++| ++|++++|+.++++++.+.. ..++.++++|+++.++ ++++++.+.+.++
T Consensus 7 k~vlItGas~gIG~~ia~~l~~~G----~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~-~~~~~~~~~~~~g 79 (261)
T PRK08265 7 KVAIVTGGATLIGAAVARALVAAG----ARVAIVDIDADNGAAVAASL--GERARFIATDITDDAA-IERAVATVVARFG 79 (261)
T ss_pred CEEEEECCCChHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHh--CCeeEEEEecCCCHHH-HHHHHHHHHHHhC
Confidence 799999999999999999999999 89999999987766664433 3468899999999999 9999999999887
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+||||||.... ..+ +.+.++|++.+++|+.+++++++.++|.|.+ +.|+||++||.++..+
T Consensus 80 --~id~lv~~ag~~~~-~~~-~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~------------~~g~ii~isS~~~~~~ 143 (261)
T PRK08265 80 --RVDILVNLACTYLD-DGL-ASSRADWLAALDVNLVSAAMLAQAAHPHLAR------------GGGAIVNFTSISAKFA 143 (261)
T ss_pred --CCCEEEECCCCCCC-CcC-cCCHHHHHHHHhHhhHHHHHHHHHHHHHHhc------------CCcEEEEECchhhccC
Confidence 59999999997643 333 4688999999999999999999999999973 5789999999998877
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC-------------------CCCchhhHHH
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN-------------------APLEVGAATA 222 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~-------------------~~~~~~~~~~ 222 (248)
. +++..|+++|+++.+|++.++.|+.++||+||+|+||+++|++.... ...+|++++.
T Consensus 144 ~---~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~ 220 (261)
T PRK08265 144 Q---TGRWLYPASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDRAKADRVAAPFHLLGRVGDPEEVAQ 220 (261)
T ss_pred C---CCCchhHHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcccchhHHHHhhcccCCCCCccCHHHHHH
Confidence 6 77889999999999999999999999999999999999999974321 1236899999
Q ss_pred HHHHHhhhcccccccceeeeCCee
Q psy11190 223 GIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 223 ~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
.+++++++.....+|+.+..||..
T Consensus 221 ~~~~l~s~~~~~~tG~~i~vdgg~ 244 (261)
T PRK08265 221 VVAFLCSDAASFVTGADYAVDGGY 244 (261)
T ss_pred HHHHHcCccccCccCcEEEECCCe
Confidence 999999888888999999999863
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-36 Score=249.47 Aligned_cols=224 Identities=24% Similarity=0.278 Sum_probs=195.9
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHH-hhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALA-QQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|+++||||++|||++++++|+++| ++|++++|+.+..+.+.... ....++.++++|+++.++ ++++++++.+.+
T Consensus 3 k~~lItGas~giG~~la~~l~~~G----~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-~~~~~~~~~~~~ 77 (256)
T PRK08643 3 KVALVTGAGQGIGFAIAKRLVEDG----FKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQ-VFAAVRQVVDTF 77 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHH-HHHHHHHHHHHc
Confidence 799999999999999999999999 89999999988777664333 334577889999999999 999999999888
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+ ++|++|||||.... .++.+.+.+++++.+++|+.+++.+++.+++.|++.+ ..++|+++||..+..
T Consensus 78 ~--~id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~----------~~~~iv~~sS~~~~~ 144 (256)
T PRK08643 78 G--DLNVVVNNAGVAPT-TPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLG----------HGGKIINATSQAGVV 144 (256)
T ss_pred C--CCCEEEECCCCCCC-CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC----------CCCEEEEECcccccc
Confidence 7 59999999998654 6777888999999999999999999999999997642 357999999999887
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC--------------------------CC
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN--------------------------AP 214 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~--------------------------~~ 214 (248)
+. ++...|+++|++++.|++.++.++.++||+|++|+||+++|+++... ..
T Consensus 145 ~~---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (256)
T PRK08643 145 GN---PELAVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDITLGRL 221 (256)
T ss_pred CC---CCCchhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhccCCCCCC
Confidence 76 77889999999999999999999999999999999999999975321 12
Q ss_pred CchhhHHHHHHHHhhhcccccccceeeeCCee
Q psy11190 215 LEVGAATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
.+|++++..+..++++.....+|+.+..||..
T Consensus 222 ~~~~~va~~~~~L~~~~~~~~~G~~i~vdgg~ 253 (256)
T PRK08643 222 SEPEDVANCVSFLAGPDSDYITGQTIIVDGGM 253 (256)
T ss_pred cCHHHHHHHHHHHhCccccCccCcEEEeCCCe
Confidence 46899999999999988889999999999864
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-36 Score=251.37 Aligned_cols=212 Identities=19% Similarity=0.264 Sum_probs=188.2
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||++|||++++++|+++| ++|++.+|+.+.. .++.++++|++|.++ ++.+++++.+.++
T Consensus 7 k~vlItGas~gIG~~ia~~l~~~G----~~Vi~~~r~~~~~----------~~~~~~~~D~~~~~~-i~~~~~~~~~~~~ 71 (258)
T PRK06398 7 KVAIVTGGSQGIGKAVVNRLKEEG----SNVINFDIKEPSY----------NDVDYFKVDVSNKEQ-VIKGIDYVISKYG 71 (258)
T ss_pred CEEEEECCCchHHHHHHHHHHHCC----CeEEEEeCCcccc----------CceEEEEccCCCHHH-HHHHHHHHHHHcC
Confidence 799999999999999999999999 8999999986431 267889999999999 9999999998887
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+||||||.... .++.+.+.++|++.+++|+.+++.+++.++|.|.++ +.++||++||..+..+
T Consensus 72 --~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----------~~g~iv~isS~~~~~~ 137 (258)
T PRK06398 72 --RIDILVNNAGIESY-GAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQ-----------DKGVIINIASVQSFAV 137 (258)
T ss_pred --CCCEEEECCCCCCC-CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----------CCeEEEEeCcchhccC
Confidence 59999999998654 778888999999999999999999999999999875 5789999999998876
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC--------------------------CCC
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN--------------------------APL 215 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~--------------------------~~~ 215 (248)
. +++..|+++|+++++|+++++.|+.++ |+||+|+||+++|++.... ...
T Consensus 138 ~---~~~~~Y~~sKaal~~~~~~la~e~~~~-i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (258)
T PRK06398 138 T---RNAAAYVTSKHAVLGLTRSIAVDYAPT-IRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEMHPMKRVG 213 (258)
T ss_pred C---CCCchhhhhHHHHHHHHHHHHHHhCCC-CEEEEEecCCccchHHhhhhhccccCChhhhHHHHHhhhhcCCcCCCc
Confidence 6 788999999999999999999999876 9999999999999975320 023
Q ss_pred chhhHHHHHHHHhhhcccccccceeeeCCee
Q psy11190 216 EVGAATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
+|++++..+++++++.....+|+.+.+||..
T Consensus 214 ~p~eva~~~~~l~s~~~~~~~G~~i~~dgg~ 244 (258)
T PRK06398 214 KPEEVAYVVAFLASDLASFITGECVTVDGGL 244 (258)
T ss_pred CHHHHHHHHHHHcCcccCCCCCcEEEECCcc
Confidence 7999999999999888888999999999863
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-36 Score=250.22 Aligned_cols=222 Identities=22% Similarity=0.293 Sum_probs=194.3
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHh-hcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQ-QHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|++|||||++|||++++++|+++| ++|++++|+ ++.+++.+... .+.++.++++|+++.++ ++.+++++.+.+
T Consensus 16 k~vlItGas~gIG~~ia~~l~~~G----~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-i~~~~~~~~~~~ 89 (258)
T PRK06935 16 KVAIVTGGNTGLGQGYAVALAKAG----ADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPES-AEKVVKEALEEF 89 (258)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC----CEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHH-HHHHHHHHHHHc
Confidence 789999999999999999999999 899999998 55555544333 24578899999999999 999999999988
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+ ++|++|||||...+ .++.+.+.++|++.+++|+.+++.+++.++|.|.++ +.++|+++||..+..
T Consensus 90 g--~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----------~~g~iv~isS~~~~~ 155 (258)
T PRK06935 90 G--KIDILVNNAGTIRR-APLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQ-----------GSGKIINIASMLSFQ 155 (258)
T ss_pred C--CCCEEEECCCCCCC-CCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhc-----------CCeEEEEECCHHhcc
Confidence 7 59999999998765 677788899999999999999999999999999875 568999999999877
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC-----------------CCCchhhHHHH
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN-----------------APLEVGAATAG 223 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~-----------------~~~~~~~~~~~ 223 (248)
+. +.+..|+++|+++++|++++++|+.++||+||+|.||+++|++.+.. ....|++++..
T Consensus 156 ~~---~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~ 232 (258)
T PRK06935 156 GG---KFVPAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRADKNRNDEILKRIPAGRWGEPDDLMGA 232 (258)
T ss_pred CC---CCchhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccChHHHHHHHhcCCCCCCCCHHHHHHH
Confidence 66 77889999999999999999999999999999999999999975421 13568999999
Q ss_pred HHHHhhhcccccccceeeeCCee
Q psy11190 224 IIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 224 ~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
+.+++++.....+|+.+..||..
T Consensus 233 ~~~l~s~~~~~~~G~~i~~dgg~ 255 (258)
T PRK06935 233 AVFLASRASDYVNGHILAVDGGW 255 (258)
T ss_pred HHHHcChhhcCCCCCEEEECCCe
Confidence 99999988888999999999853
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-36 Score=249.03 Aligned_cols=219 Identities=26% Similarity=0.306 Sum_probs=188.7
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|+++||||++|||++++++|+++| ++|++++|+.++++++.+.. ..++.++++|+++.++ ++.+++++.+.++
T Consensus 7 k~vlVtGas~gIG~~ia~~l~~~G----~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~-~~~~~~~~~~~~g 79 (263)
T PRK06200 7 QVALITGGGSGIGRALVERFLAEG----ARVAVLERSAEKLASLRQRF--GDHVLVVEGDVTSYAD-NQRAVDQTVDAFG 79 (263)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHh--CCcceEEEccCCCHHH-HHHHHHHHHHhcC
Confidence 789999999999999999999999 89999999988776664332 3467889999999999 9999999988877
Q ss_pred CCCccEEEeccccCCccccCCCCChhh----hhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCC
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQ----MTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIM 157 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~----~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~ 157 (248)
++|+||||||+.....++.+.+.++ |++.+++|+.+++.+++.++|.|.+ ..|+||+++|..
T Consensus 80 --~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~------------~~g~iv~~sS~~ 145 (263)
T PRK06200 80 --KLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKA------------SGGSMIFTLSNS 145 (263)
T ss_pred --CCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHh------------cCCEEEEECChh
Confidence 5999999999864334555556655 8999999999999999999999876 368999999999
Q ss_pred CcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC-------------------------
Q psy11190 158 GSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN------------------------- 212 (248)
Q Consensus 158 ~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~------------------------- 212 (248)
+..+. ++...|+++|++++.|+++++.+++++ ||||+|.||+++|+|....
T Consensus 146 ~~~~~---~~~~~Y~~sK~a~~~~~~~la~el~~~-Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 221 (263)
T PRK06200 146 SFYPG---GGGPLYTASKHAVVGLVRQLAYELAPK-IRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAITPL 221 (263)
T ss_pred hcCCC---CCCchhHHHHHHHHHHHHHHHHHHhcC-cEEEEEeCCccccCCcCccccCCCCcccccccchhHHhhcCCCC
Confidence 88776 677899999999999999999999885 9999999999999975310
Q ss_pred -CCCchhhHHHHHHHHhhhc-ccccccceeeeCCe
Q psy11190 213 -APLEVGAATAGIIQFIQSL-GEAHNGGFFEYTGK 245 (248)
Q Consensus 213 -~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~g~ 245 (248)
...+|+|++..+++++++. +...+|+.+.+||.
T Consensus 222 ~r~~~~~eva~~~~fl~s~~~~~~itG~~i~vdgG 256 (263)
T PRK06200 222 QFAPQPEDHTGPYVLLASRRNSRALTGVVINADGG 256 (263)
T ss_pred CCCCCHHHHhhhhhheecccccCcccceEEEEcCc
Confidence 1246999999999999888 78899999999986
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-36 Score=251.13 Aligned_cols=224 Identities=21% Similarity=0.188 Sum_probs=194.4
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHH-hhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALA-QQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|+++||||++|||++++++|+++| ++|++++|+.+..+++.+.. ..+.++.++++|+++.++ +..+++++.+.+
T Consensus 11 k~vlVtGas~giG~~ia~~l~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-v~~~~~~~~~~~ 85 (278)
T PRK08277 11 KVAVITGGGGVLGGAMAKELARAG----AKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKES-LEQARQQILEDF 85 (278)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHH-HHHHHHHHHHHc
Confidence 789999999999999999999999 89999999987777664333 334578899999999999 999999999888
Q ss_pred cCCCccEEEeccccCCcc--------------ccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCC
Q psy11190 81 KDQGLNVLVNNAGIAAKF--------------TRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSS 146 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~--------------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~ 146 (248)
+ ++|+||||||...+. .++.+.+.++|++.+++|+.+++.+++.++|.|.++ +
T Consensus 86 g--~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----------~ 152 (278)
T PRK08277 86 G--PCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGR-----------K 152 (278)
T ss_pred C--CCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-----------C
Confidence 7 599999999965331 245677889999999999999999999999999875 5
Q ss_pred CceEEEeecCCCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC--------------
Q psy11190 147 RAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN-------------- 212 (248)
Q Consensus 147 ~~~iv~vss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~-------------- 212 (248)
.++||++||..+..+. ++...|+++|++++.|+++++.++.++||+||+|.||+++|++.+..
T Consensus 153 ~g~ii~isS~~~~~~~---~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~ 229 (278)
T PRK08277 153 GGNIINISSMNAFTPL---TKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANK 229 (278)
T ss_pred CcEEEEEccchhcCCC---CCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccccchhHHHH
Confidence 7899999999998776 77889999999999999999999999999999999999999975321
Q ss_pred --------CCCchhhHHHHHHHHhhh-cccccccceeeeCCee
Q psy11190 213 --------APLEVGAATAGIIQFIQS-LGEAHNGGFFEYTGKA 246 (248)
Q Consensus 213 --------~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~g~~ 246 (248)
...+|+++++.+++++++ .....+|+.+..||..
T Consensus 230 ~~~~~p~~r~~~~~dva~~~~~l~s~~~~~~~tG~~i~vdgG~ 272 (278)
T PRK08277 230 ILAHTPMGRFGKPEELLGTLLWLADEKASSFVTGVVLPVDGGF 272 (278)
T ss_pred HhccCCccCCCCHHHHHHHHHHHcCccccCCcCCCEEEECCCe
Confidence 124799999999999988 7889999999999863
|
|
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-36 Score=248.36 Aligned_cols=222 Identities=26% Similarity=0.315 Sum_probs=190.3
Q ss_pred ceEEEecCC--CchhHHHHHHHHhCCCCCCceEEEeecC-----------chhHHHHH-HHHhhcCCceeEEeeccCCch
Q psy11190 2 KSILITGCN--RGLGLGMIKVLVGLGNNQPAHIFATCRN-----------KDKAVELL-ALAQQHSNLHVIELDVTDFSK 67 (248)
Q Consensus 2 k~~lVtGas--~giG~~ia~~l~~~g~~~~~~V~~~~r~-----------~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~ 67 (248)
|+++||||+ +|||+++|++|+++| ++|++.+++ .+...++. ++...+.++.++++|+++.++
T Consensus 7 k~vlVtGas~~~giG~~~a~~l~~~G----~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~ 82 (256)
T PRK12859 7 KVAVVTGVSRLDGIGAAICKELAEAG----ADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDA 82 (256)
T ss_pred cEEEEECCCCCCChHHHHHHHHHHCC----CeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH
Confidence 799999999 599999999999999 889887543 12222332 223334578899999999999
Q ss_pred hhhhHHHHhhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCC
Q psy11190 68 QQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSR 147 (248)
Q Consensus 68 ~v~~~~~~i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~ 147 (248)
++++++++.+.++ ++|++|||||.... .++.+.+.++|++.+++|+.+++.++++++|.|.++ ..
T Consensus 83 -i~~~~~~~~~~~g--~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----------~~ 147 (256)
T PRK12859 83 -PKELLNKVTEQLG--YPHILVNNAAYSTN-NDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKK-----------SG 147 (256)
T ss_pred -HHHHHHHHHHHcC--CCcEEEECCCCCCC-CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-----------CC
Confidence 9999999998887 59999999998755 678889999999999999999999999999999864 57
Q ss_pred ceEEEeecCCCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC------------CCC
Q psy11190 148 AAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN------------APL 215 (248)
Q Consensus 148 ~~iv~vss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~------------~~~ 215 (248)
|+||++||..+..+. +++..|+++|+++.+|+++++.++.++||+||+|+||+++|++.... ...
T Consensus 148 g~iv~isS~~~~~~~---~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~~~ 224 (256)
T PRK12859 148 GRIINMTSGQFQGPM---VGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMTEEIKQGLLPMFPFGRIG 224 (256)
T ss_pred eEEEEEcccccCCCC---CCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCCHHHHHHHHhcCCCCCCc
Confidence 899999999987766 78899999999999999999999999999999999999999964321 135
Q ss_pred chhhHHHHHHHHhhhcccccccceeeeCCe
Q psy11190 216 EVGAATAGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
+|+++++.+..++++.....+|+++.+||.
T Consensus 225 ~~~d~a~~~~~l~s~~~~~~~G~~i~~dgg 254 (256)
T PRK12859 225 EPKDAARLIKFLASEEAEWITGQIIHSEGG 254 (256)
T ss_pred CHHHHHHHHHHHhCccccCccCcEEEeCCC
Confidence 799999999999988888999999999986
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=250.78 Aligned_cols=224 Identities=21% Similarity=0.247 Sum_probs=193.6
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|+++||||++|||++++++|+++| ++|++++|+.+..+++.+......++.++++|++|.++ ++.+++.+.+.++
T Consensus 19 k~~lItGas~gIG~~la~~l~~~G----~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~-~~~~~~~~~~~~g 93 (280)
T PLN02253 19 KVALVTGGATGIGESIVRLFHKHG----AKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDD-VSRAVDFTVDKFG 93 (280)
T ss_pred CEEEEECCCchHHHHHHHHHHHcC----CEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHH-HHHHHHHHHHHhC
Confidence 789999999999999999999999 89999999877766664444334578899999999999 9999999999887
Q ss_pred CCCccEEEeccccCCc-cccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 82 DQGLNVLVNNAGIAAK-FTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
++|+||||||...+ ...+.+.+.+++++.+++|+.+++++++++++.|.++ ..|+|++++|..+..
T Consensus 94 --~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----------~~g~ii~isS~~~~~ 160 (280)
T PLN02253 94 --TLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPL-----------KKGSIVSLCSVASAI 160 (280)
T ss_pred --CCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc-----------CCceEEEecChhhcc
Confidence 59999999998643 2456778899999999999999999999999999764 468999999999887
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC--------------------------CC
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN--------------------------AP 214 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~--------------------------~~ 214 (248)
+. ++...|+++|++++.|+++++.|+.++||+|++|+||+++|++.... ..
T Consensus 161 ~~---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 237 (280)
T PLN02253 161 GG---LGPHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNANLKGVE 237 (280)
T ss_pred cC---CCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHHHhhcCCCCcCCC
Confidence 66 66778999999999999999999999999999999999999864210 12
Q ss_pred CchhhHHHHHHHHhhhcccccccceeeeCCee
Q psy11190 215 LEVGAATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
..|+++++.++.++++.....+|+.+..+|..
T Consensus 238 ~~~~dva~~~~~l~s~~~~~i~G~~i~vdgG~ 269 (280)
T PLN02253 238 LTVDDVANAVLFLASDEARYISGLNLMIDGGF 269 (280)
T ss_pred CCHHHHHHHHHhhcCcccccccCcEEEECCch
Confidence 47999999999999887888999999998863
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-36 Score=254.02 Aligned_cols=222 Identities=26% Similarity=0.294 Sum_probs=190.6
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCch--hHHHHHHHHh-hcCCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKD--KAVELLALAQ-QHSNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~--~~~~~~~~~~-~~~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
|++|||||++|||++++++|+++| ++|++..++.+ ..+++.+... .+.++.++++|+++.++ ++.+++++.+
T Consensus 56 k~vlITGas~gIG~~~a~~l~~~G----~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-v~~~~~~~~~ 130 (300)
T PRK06128 56 RKALITGADSGIGRATAIAFAREG----ADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAF-CRQLVERAVK 130 (300)
T ss_pred CEEEEecCCCcHHHHHHHHHHHcC----CEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHH-HHHHHHHHHH
Confidence 799999999999999999999999 89998877643 2334433332 34568889999999999 9999999998
Q ss_pred hhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 79 VVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
.++ ++|+||||||.......+.+.+.++|++.+++|+.+++++++.++|.|.+ .++||++||..+
T Consensus 131 ~~g--~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-------------~~~iv~~sS~~~ 195 (300)
T PRK06128 131 ELG--GLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPP-------------GASIINTGSIQS 195 (300)
T ss_pred HhC--CCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCc-------------CCEEEEECCccc
Confidence 887 59999999998654466788899999999999999999999999999854 478999999998
Q ss_pred cccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC-----------------CCCchhhHH
Q psy11190 159 SIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN-----------------APLEVGAAT 221 (248)
Q Consensus 159 ~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~-----------------~~~~~~~~~ 221 (248)
..+. +++..|+++|+++++|+++|+.++.++||+||+|.||+++|++.... ....|++++
T Consensus 196 ~~~~---~~~~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva 272 (300)
T PRK06128 196 YQPS---PTLLDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQPPEKIPDFGSETPMKRPGQPVEMA 272 (300)
T ss_pred cCCC---CCchhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCCCCHHHHHHHhcCCCCCCCcCHHHHH
Confidence 8776 77889999999999999999999999999999999999999986421 024789999
Q ss_pred HHHHHHhhhcccccccceeeeCCee
Q psy11190 222 AGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 222 ~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
..++.++++.....+|+.+.++|..
T Consensus 273 ~~~~~l~s~~~~~~~G~~~~v~gg~ 297 (300)
T PRK06128 273 PLYVLLASQESSYVTGEVFGVTGGL 297 (300)
T ss_pred HHHHHHhCccccCccCcEEeeCCCE
Confidence 9999998887778899999999864
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-36 Score=252.98 Aligned_cols=222 Identities=20% Similarity=0.245 Sum_probs=191.0
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCc--hhHHHHHHHHh-hcCCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNK--DKAVELLALAQ-QHSNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~--~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
|++|||||++|||++++++|+++| ++|++.+|+. +..+++.+... .+.++.++++|++|.++ +.++++++.+
T Consensus 50 k~vlITGas~gIG~aia~~L~~~G----~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-~~~~~~~~~~ 124 (294)
T PRK07985 50 RKALVTGGDSGIGRAAAIAYAREG----ADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKF-ARSLVHEAHK 124 (294)
T ss_pred CEEEEECCCCcHHHHHHHHHHHCC----CEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHH-HHHHHHHHHH
Confidence 789999999999999999999999 8999987753 33444543332 24467889999999999 9999999998
Q ss_pred hhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 79 VVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
.++ ++|++|||||......++.+.+.++|++.+++|+.++++++++++|.|.+ .++||++||..+
T Consensus 125 ~~g--~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~-------------~g~iv~iSS~~~ 189 (294)
T PRK07985 125 ALG--GLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPK-------------GASIITTSSIQA 189 (294)
T ss_pred HhC--CCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhc-------------CCEEEEECCchh
Confidence 887 59999999997644456778899999999999999999999999999854 478999999998
Q ss_pred cccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC-----------------CCCchhhHH
Q psy11190 159 SIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN-----------------APLEVGAAT 221 (248)
Q Consensus 159 ~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~-----------------~~~~~~~~~ 221 (248)
..+. +++..|+++|+++++|++.++.|++++||+||+|.||+++|++.... ....|++++
T Consensus 190 ~~~~---~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~pedva 266 (294)
T PRK07985 190 YQPS---PHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELA 266 (294)
T ss_pred ccCC---CCcchhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccCCCHHHHHHHhccCCCCCCCCHHHHH
Confidence 8766 77889999999999999999999999999999999999999974210 135799999
Q ss_pred HHHHHHhhhcccccccceeeeCCee
Q psy11190 222 AGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 222 ~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
..+++++++.....+|+.+..+|..
T Consensus 267 ~~~~fL~s~~~~~itG~~i~vdgG~ 291 (294)
T PRK07985 267 PVYVYLASQESSYVTAEVHGVCGGE 291 (294)
T ss_pred HHHHhhhChhcCCccccEEeeCCCe
Confidence 9999999988889999999999864
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-35 Score=240.23 Aligned_cols=223 Identities=33% Similarity=0.569 Sum_probs=192.2
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
||+++||||++|||++++++|+++| ++|++++|+.++.+++.+ ..++.++.+|++|.++ ++.+++.+.+
T Consensus 1 ~k~vlItG~sg~iG~~la~~l~~~G----~~V~~~~r~~~~~~~~~~----~~~~~~~~~D~~d~~~-~~~~~~~~~~-- 69 (225)
T PRK08177 1 KRTALIIGASRGLGLGLVDRLLERG----WQVTATVRGPQQDTALQA----LPGVHIEKLDMNDPAS-LDQLLQRLQG-- 69 (225)
T ss_pred CCEEEEeCCCchHHHHHHHHHHhCC----CEEEEEeCCCcchHHHHh----ccccceEEcCCCCHHH-HHHHHHHhhc--
Confidence 8999999999999999999999999 899999999877654432 2367788999999998 8888887754
Q ss_pred cCCCccEEEeccccCCc-cccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 81 KDQGLNVLVNNAGIAAK-FTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
.++|+||||||...+ ..++.+.+.+++++.+.+|+.+++.+++.+++.+++ ..++++++||..+.
T Consensus 70 --~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~------------~~~~iv~~ss~~g~ 135 (225)
T PRK08177 70 --QRFDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRP------------GQGVLAFMSSQLGS 135 (225)
T ss_pred --CCCCEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhh------------cCCEEEEEccCccc
Confidence 259999999998743 245677889999999999999999999999999875 35789999998876
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCCCCchhhHHHHHHHHhhhcccccccce
Q psy11190 160 IEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQSLGEAHNGGF 239 (248)
Q Consensus 160 ~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 239 (248)
.+..+..++..|+++|++++.|++.++.++.++||+||+|+||+++|++.++..+.++++.++.++..+.......++.+
T Consensus 136 ~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (225)
T PRK08177 136 VELPDGGEMPLYKASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTDMGGDNAPLDVETSVKGLVEQIEAASGKGGHRF 215 (225)
T ss_pred cccCCCCCccchHHHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceecCCCCCCCCCCHHHHHHHHHHHHHhCCccCCCce
Confidence 65433356778999999999999999999999999999999999999998887788999999999999988776777777
Q ss_pred eeeCCeecC
Q psy11190 240 FEYTGKAIK 248 (248)
Q Consensus 240 ~~~~g~~~~ 248 (248)
++|+|++|+
T Consensus 216 ~~~~~~~~~ 224 (225)
T PRK08177 216 IDYQGETLP 224 (225)
T ss_pred eCcCCcCCC
Confidence 999999874
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=255.63 Aligned_cols=209 Identities=19% Similarity=0.250 Sum_probs=184.2
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHH-hhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALA-QQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|+++||||++|||++++++|+++| ++|++++|+.++++++.+.. ..+.++.++.+|++|.++ ++.+++++.+.+
T Consensus 8 k~vlITGAs~GIG~aia~~la~~G----~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~-v~~~~~~~~~~~ 82 (330)
T PRK06139 8 AVVVITGASSGIGQATAEAFARRG----ARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQ-VKALATQAASFG 82 (330)
T ss_pred CEEEEcCCCCHHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHH-HHHHHHHHHHhc
Confidence 689999999999999999999999 89999999998888774433 335578889999999999 999999998877
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+ ++|++|||||.... .++.+.+.+++++.+++|+.+++++++.++|.|+++ +.|+||+++|..+..
T Consensus 83 g--~iD~lVnnAG~~~~-~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~-----------~~g~iV~isS~~~~~ 148 (330)
T PRK06139 83 G--RIDVWVNNVGVGAV-GRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQ-----------GHGIFINMISLGGFA 148 (330)
T ss_pred C--CCCEEEECCCcCCC-CCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHc-----------CCCEEEEEcChhhcC
Confidence 6 59999999998765 778888999999999999999999999999999885 578999999999887
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCC-CeEEEEecCcceecCCCCC------------CCCCchhhHHHHHHHH
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGD-KIIATAMHPGWVKTDMGGS------------NAPLEVGAATAGIIQF 227 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~-~i~v~~v~PG~v~t~~~~~------------~~~~~~~~~~~~~~~~ 227 (248)
+. +.+..|+++|+++.+|+++|+.|+.++ ||+|++|+||+++|++... .+..+|+++++.++..
T Consensus 149 ~~---p~~~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~pe~vA~~il~~ 225 (330)
T PRK06139 149 AQ---PYAAAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGANYTGRRLTPPPPVYDPRRVAKAVVRL 225 (330)
T ss_pred CC---CCchhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCcccccccccccccccCCCCCCCHHHHHHHHHHH
Confidence 76 778899999999999999999999875 9999999999999998642 1245899999999998
Q ss_pred hhhcc
Q psy11190 228 IQSLG 232 (248)
Q Consensus 228 ~~~~~ 232 (248)
+..+.
T Consensus 226 ~~~~~ 230 (330)
T PRK06139 226 ADRPR 230 (330)
T ss_pred HhCCC
Confidence 87643
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=247.12 Aligned_cols=221 Identities=26% Similarity=0.326 Sum_probs=187.8
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|+++||||++|||+++|++|+++| ++|++.+++.++.. .++.. .++.++++|++|.++ ++++++++.+.++
T Consensus 8 k~~lItGas~gIG~~~a~~l~~~G----~~v~~~~~~~~~~~--~~l~~--~~~~~~~~Dl~~~~~-~~~~~~~~~~~~~ 78 (255)
T PRK06463 8 KVALITGGTRGIGRAIAEAFLREG----AKVAVLYNSAENEA--KELRE--KGVFTIKCDVGNRDQ-VKKSKEVVEKEFG 78 (255)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCC----CEEEEEeCCcHHHH--HHHHh--CCCeEEEecCCCHHH-HHHHHHHHHHHcC
Confidence 789999999999999999999999 88988876543321 12221 157889999999999 9999999998887
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|.++ +.++||++||..+..+
T Consensus 79 --~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~-----------~~g~iv~isS~~~~~~ 144 (255)
T PRK06463 79 --RVDVLVNNAGIMYL-MPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLS-----------KNGAIVNIASNAGIGT 144 (255)
T ss_pred --CCCEEEECCCcCCC-CChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc-----------CCcEEEEEcCHHhCCC
Confidence 59999999998654 677788999999999999999999999999999864 5789999999887643
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC--------------------CCCchhhHH
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN--------------------APLEVGAAT 221 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~--------------------~~~~~~~~~ 221 (248)
. .++...|+++|+++++|+++++.|+.++||+||+|+||+++|++.... ...+|++++
T Consensus 145 ~--~~~~~~Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va 222 (255)
T PRK06463 145 A--AEGTTFYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKTVLKTTGKPEDIA 222 (255)
T ss_pred C--CCCccHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhCCCcCCCcCHHHHH
Confidence 2 256788999999999999999999999999999999999999985321 124799999
Q ss_pred HHHHHHhhhcccccccceeeeCCeec
Q psy11190 222 AGIIQFIQSLGEAHNGGFFEYTGKAI 247 (248)
Q Consensus 222 ~~~~~~~~~~~~~~~g~~~~~~g~~~ 247 (248)
+.++.+++......+|+.+.++|...
T Consensus 223 ~~~~~l~s~~~~~~~G~~~~~dgg~~ 248 (255)
T PRK06463 223 NIVLFLASDDARYITGQVIVADGGRI 248 (255)
T ss_pred HHHHHHcChhhcCCCCCEEEECCCee
Confidence 99999998888889999999998653
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-35 Score=245.83 Aligned_cols=224 Identities=20% Similarity=0.293 Sum_probs=193.6
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeec-CchhHHHHHH-HHhhcCCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCR-NKDKAVELLA-LAQQHSNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r-~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
+|+++||||++|||++++++|+++| ++|+++.+ +.+..+.+.+ +...+.++.++++|+++.++ ++.+++++.+
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G----~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-~~~~~~~~~~ 76 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQG----FDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPE-GAQALDKLIQ 76 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC----CEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHH-HHHHHHHHHH
Confidence 5799999999999999999999999 89988765 5555555533 33335578999999999999 9999999998
Q ss_pred hhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 79 VVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
.++ ++|+||||||.... ..+.+.+.+++++.+.+|+.+++.+++++++.|.+++ ..++||++||..+
T Consensus 77 ~~~--~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~----------~~g~ii~isS~~~ 143 (256)
T PRK12743 77 RLG--RIDVLVNNAGAMTK-APFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQG----------QGGRIINITSVHE 143 (256)
T ss_pred HcC--CCCEEEECCCCCCC-CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC----------CCeEEEEEeeccc
Confidence 887 59999999998765 6677789999999999999999999999999997642 3589999999988
Q ss_pred cccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC---------------CCCchhhHHHH
Q psy11190 159 SIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN---------------APLEVGAATAG 223 (248)
Q Consensus 159 ~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~---------------~~~~~~~~~~~ 223 (248)
..+. ++...|+++|+++.+++++++.++.++||+|+.|+||+++|++.+.. ...+|++++..
T Consensus 144 ~~~~---~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~ 220 (256)
T PRK12743 144 HTPL---PGASAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMDDSDVKPDSRPGIPLGRPGDTHEIASL 220 (256)
T ss_pred cCCC---CCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCccccccChHHHHHHHhcCCCCCCCCHHHHHHH
Confidence 8776 77889999999999999999999999999999999999999986431 13479999999
Q ss_pred HHHHhhhcccccccceeeeCCe
Q psy11190 224 IIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 224 ~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
++.+++......+|.++..+|.
T Consensus 221 ~~~l~~~~~~~~~G~~~~~dgg 242 (256)
T PRK12743 221 VAWLCSEGASYTTGQSLIVDGG 242 (256)
T ss_pred HHHHhCccccCcCCcEEEECCC
Confidence 9999988778899999999986
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-35 Score=247.07 Aligned_cols=223 Identities=22% Similarity=0.319 Sum_probs=196.8
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhh-cCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQ-HSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|+++||||++|||++++++|+++| ++|++.+|+.+++++..+.... +.++.++++|+++.++ ++.+++++.+.+
T Consensus 11 k~~lItGa~~~iG~~ia~~l~~~G----~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-~~~~~~~~~~~~ 85 (265)
T PRK07097 11 KIALITGASYGIGFAIAKAYAKAG----ATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDG-VQAMVSQIEKEV 85 (265)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC----CeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHH-HHHHHHHHHHhC
Confidence 789999999999999999999999 8999999998887776444433 4478899999999999 999999999887
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+ ++|+||||||...+ .++.+.+.+++++.+++|+.+++.+++.++|.|.++ +.++||++||..+..
T Consensus 86 ~--~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----------~~g~iv~isS~~~~~ 151 (265)
T PRK07097 86 G--VIDILVNNAGIIKR-IPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKK-----------GHGKIINICSMMSEL 151 (265)
T ss_pred C--CCCEEEECCCCCCC-CCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc-----------CCcEEEEEcCccccC
Confidence 7 59999999998765 677788999999999999999999999999999875 578999999998887
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC-----------------------CCCch
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN-----------------------APLEV 217 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~-----------------------~~~~~ 217 (248)
+. +++..|+++|++++.|+++++.++.++||+|++|.||+++|++.... ...+|
T Consensus 152 ~~---~~~~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (265)
T PRK07097 152 GR---ETVSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTPAARWGDP 228 (265)
T ss_pred CC---CCCccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcCCccCCcCH
Confidence 76 77889999999999999999999999999999999999999975321 12468
Q ss_pred hhHHHHHHHHhhhcccccccceeeeCCee
Q psy11190 218 GAATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
++++..++.++++.....+|+.+.++|..
T Consensus 229 ~dva~~~~~l~~~~~~~~~g~~~~~~gg~ 257 (265)
T PRK07097 229 EDLAGPAVFLASDASNFVNGHILYVDGGI 257 (265)
T ss_pred HHHHHHHHHHhCcccCCCCCCEEEECCCc
Confidence 99999999999988888999999999853
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-36 Score=271.52 Aligned_cols=220 Identities=24% Similarity=0.283 Sum_probs=194.7
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||++|||+++|++|+++| ++|++++|+.++++++.+.. ..++..+++|++|.++ ++.+++++.+.++
T Consensus 270 k~~lItGas~gIG~~~a~~l~~~G----~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~-~~~~~~~~~~~~g 342 (520)
T PRK06484 270 RVVAITGGARGIGRAVADRFAAAG----DRLLIIDRDAEGAKKLAEAL--GDEHLSVQADITDEAA-VESAFAQIQARWG 342 (520)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHh--CCceeEEEccCCCHHH-HHHHHHHHHHHcC
Confidence 789999999999999999999999 89999999988777665433 3467789999999999 9999999999887
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+||||||......++.+.+.++|++.+++|+.+++++++.++|.| . +.|+||++||.++..+
T Consensus 343 --~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~------------~~g~iv~isS~~~~~~ 407 (520)
T PRK06484 343 --RLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLM-S------------QGGVIVNLGSIASLLA 407 (520)
T ss_pred --CCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHh-c------------cCCEEEEECchhhcCC
Confidence 599999999986443567788999999999999999999999999999 3 4689999999999887
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC------------------CCCchhhHHHH
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN------------------APLEVGAATAG 223 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~------------------~~~~~~~~~~~ 223 (248)
. +++..|+++|+++++|+++|+.|+.++||+||+|+||+++|+|.... ...+|+++++.
T Consensus 408 ~---~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~ 484 (520)
T PRK06484 408 L---PPRNAYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKASGRADFDSIRRRIPLGRLGDPEEVAEA 484 (520)
T ss_pred C---CCCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccccHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence 6 78899999999999999999999999999999999999999985421 12479999999
Q ss_pred HHHHhhhcccccccceeeeCCee
Q psy11190 224 IIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 224 ~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
+++++++.....+|+++.++|..
T Consensus 485 ~~~l~s~~~~~~~G~~i~vdgg~ 507 (520)
T PRK06484 485 IAFLASPAASYVNGATLTVDGGW 507 (520)
T ss_pred HHHHhCccccCccCcEEEECCCc
Confidence 99999887788999999999863
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-36 Score=254.13 Aligned_cols=216 Identities=21% Similarity=0.320 Sum_probs=189.4
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||++|||+++++.|+++| ++|++++|+.++++++.+.......+..+++|++|.++ ++.+++++.+.++
T Consensus 10 k~vlItGas~gIG~~ia~~l~~~G----~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~-v~~~~~~~~~~~g 84 (296)
T PRK05872 10 KVVVVTGAARGIGAELARRLHARG----AKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAA-MQAAAEEAVERFG 84 (296)
T ss_pred CEEEEECCCchHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHH-HHHHHHHHHHHcC
Confidence 689999999999999999999999 89999999998887775544434466777899999999 9999999998877
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|.+ ..|+||++||..+..+
T Consensus 85 --~id~vI~nAG~~~~-~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~------------~~g~iv~isS~~~~~~ 149 (296)
T PRK05872 85 --GIDVVVANAGIASG-GSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIE------------RRGYVLQVSSLAAFAA 149 (296)
T ss_pred --CCCEEEECCCcCCC-cCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH------------cCCEEEEEeCHhhcCC
Confidence 59999999998764 77888899999999999999999999999999877 3589999999998877
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC-------------------CCCchhhHHH
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN-------------------APLEVGAATA 222 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~-------------------~~~~~~~~~~ 222 (248)
. +++..|+++|+++++|+++++.|+.++||+|++|+||+++|+|.+.. ...+++++++
T Consensus 150 ~---~~~~~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~ 226 (296)
T PRK05872 150 A---PGMAAYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADADLPAFRELRARLPWPLRRTTSVEKCAA 226 (296)
T ss_pred C---CCchHHHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhccccchhHHHHHhhCCCcccCCCCHHHHHH
Confidence 6 77889999999999999999999999999999999999999986531 1357999999
Q ss_pred HHHHHhhhccccccccee
Q psy11190 223 GIIQFIQSLGEAHNGGFF 240 (248)
Q Consensus 223 ~~~~~~~~~~~~~~g~~~ 240 (248)
.++..+.......++..+
T Consensus 227 ~i~~~~~~~~~~i~~~~~ 244 (296)
T PRK05872 227 AFVDGIERRARRVYAPRW 244 (296)
T ss_pred HHHHHHhcCCCEEEchHH
Confidence 999999887666666543
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-35 Score=243.78 Aligned_cols=223 Identities=22% Similarity=0.263 Sum_probs=190.9
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHH-HHHhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELL-ALAQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
.|+++||||++|||++++++|+++| ++|++++|+.. .++. .+.....++.++++|+++.++ +..+++++.+.
T Consensus 5 ~k~vlItGas~gIG~~ia~~l~~~G----~~vi~~~r~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~ 77 (248)
T TIGR01832 5 GKVALVTGANTGLGQGIAVGLAEAG----ADIVGAGRSEP--SETQQQVEALGRRFLSLTADLSDIEA-IKALVDSAVEE 77 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC----CEEEEEcCchH--HHHHHHHHhcCCceEEEECCCCCHHH-HHHHHHHHHHH
Confidence 3799999999999999999999999 89999999752 2332 222234578899999999999 99999999887
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
++ ++|++|||||...+ .++.+.+.++|++.+++|+.+++.+++.+++.|.+++ ..++||++||..+.
T Consensus 78 ~~--~~d~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~----------~~g~iv~~sS~~~~ 144 (248)
T TIGR01832 78 FG--HIDILVNNAGIIRR-ADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQG----------RGGKIINIASMLSF 144 (248)
T ss_pred cC--CCCEEEECCCCCCC-CChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC----------CCeEEEEEecHHhc
Confidence 76 59999999998765 5667788899999999999999999999999997641 26899999999887
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC-----------------CCCchhhHHH
Q psy11190 160 IEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN-----------------APLEVGAATA 222 (248)
Q Consensus 160 ~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~-----------------~~~~~~~~~~ 222 (248)
.+. +....|+++|+++++|+++++.++.++||+||+|.||+++|++.+.. ...+|+++++
T Consensus 145 ~~~---~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~ 221 (248)
T TIGR01832 145 QGG---IRVPSYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRADEDRNAAILERIPAGRWGTPDDIGG 221 (248)
T ss_pred cCC---CCCchhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccChHHHHHHHhcCCCCCCcCHHHHHH
Confidence 665 67789999999999999999999999999999999999999986421 1356899999
Q ss_pred HHHHHhhhcccccccceeeeCCee
Q psy11190 223 GIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 223 ~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
.++.++++.....+|+++.+||..
T Consensus 222 ~~~~l~s~~~~~~~G~~i~~dgg~ 245 (248)
T TIGR01832 222 PAVFLASSASDYVNGYTLAVDGGW 245 (248)
T ss_pred HHHHHcCccccCcCCcEEEeCCCE
Confidence 999999887888999999999863
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-35 Score=245.26 Aligned_cols=222 Identities=19% Similarity=0.229 Sum_probs=193.3
Q ss_pred ceEEEecCCC-chhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhh--c-CCceeEEeeccCCchhhhhHHHHhh
Q psy11190 2 KSILITGCNR-GLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQ--H-SNLHVIELDVTDFSKQQDVLFKDIS 77 (248)
Q Consensus 2 k~~lVtGas~-giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~--~-~~~~~~~~D~~~~~~~v~~~~~~i~ 77 (248)
|+++||||+| |||+++++.|+++| ++|++.+|+.+++++..+.... + .++.++++|+++.++ ++.+++.+.
T Consensus 18 k~vlItG~sg~gIG~~ia~~l~~~G----~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-~~~~~~~~~ 92 (262)
T PRK07831 18 KVVLVTAAAGTGIGSATARRALEEG----ARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQ-VDALIDAAV 92 (262)
T ss_pred CEEEEECCCcccHHHHHHHHHHHcC----CEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHH-HHHHHHHHH
Confidence 7899999985 99999999999999 8899999998877766443322 2 367889999999999 999999998
Q ss_pred hhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCC
Q psy11190 78 DVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIM 157 (248)
Q Consensus 78 ~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~ 157 (248)
+.++ ++|+||||||...+ ..+.+.+.++|++.+++|+.+++.+++.++|.|..+. ..++|++++|..
T Consensus 93 ~~~g--~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~----------~~g~iv~~ss~~ 159 (262)
T PRK07831 93 ERLG--RLDVLVNNAGLGGQ-TPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARG----------HGGVIVNNASVL 159 (262)
T ss_pred HHcC--CCCEEEECCCCCCC-CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC----------CCcEEEEeCchh
Confidence 8876 59999999998654 6778889999999999999999999999999998741 268999999988
Q ss_pred CcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC----------------CCCchhhHH
Q psy11190 158 GSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN----------------APLEVGAAT 221 (248)
Q Consensus 158 ~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~----------------~~~~~~~~~ 221 (248)
+..+. +++..|+++|+++++|+++++.|++++||+||+|+||+++|++.... ...+|++++
T Consensus 160 ~~~~~---~~~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~r~~~p~~va 236 (262)
T PRK07831 160 GWRAQ---HGQAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVTSAELLDELAAREAFGRAAEPWEVA 236 (262)
T ss_pred hcCCC---CCCcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccccCHHHHHHHHhcCCCCCCcCHHHHH
Confidence 87765 77889999999999999999999999999999999999999986431 134799999
Q ss_pred HHHHHHhhhcccccccceeeeCC
Q psy11190 222 AGIIQFIQSLGEAHNGGFFEYTG 244 (248)
Q Consensus 222 ~~~~~~~~~~~~~~~g~~~~~~g 244 (248)
+.+++++++.....+|+++..++
T Consensus 237 ~~~~~l~s~~~~~itG~~i~v~~ 259 (262)
T PRK07831 237 NVIAFLASDYSSYLTGEVVSVSS 259 (262)
T ss_pred HHHHHHcCchhcCcCCceEEeCC
Confidence 99999999888899999999887
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-35 Score=243.23 Aligned_cols=225 Identities=17% Similarity=0.180 Sum_probs=191.5
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHh-hcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQ-QHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
.|+++||||++|||+++++.|+++| ++|++++|+.++++++.+... ...++.++++|++|+++ ++++++++.+.
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G----~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~ 75 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEG----ANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPED-VQKMVEQIDEK 75 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHH-HHHHHHHHHHH
Confidence 4899999999999999999999999 899999999887777644333 34578899999999999 99999999988
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
++ ++|+||||||.... .++.+.+.++|++.+++|+.+++++++++++.|.++. ..++|+++||..+.
T Consensus 76 ~~--~id~lI~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~----------~~g~ii~isS~~~~ 142 (252)
T PRK07677 76 FG--RIDALINNAAGNFI-CPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKG----------IKGNIINMVATYAW 142 (252)
T ss_pred hC--CccEEEECCCCCCC-CCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC----------CCEEEEEEcChhhc
Confidence 87 59999999997543 5677889999999999999999999999999987631 35899999999887
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHhhccC-CCeEEEEecCcceecC-CCCC-----------------CCCCchhhH
Q psy11190 160 IEDNTQGGFHPYRCSKAALNAATRSLSIDLKG-DKIIATAMHPGWVKTD-MGGS-----------------NAPLEVGAA 220 (248)
Q Consensus 160 ~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~-~~i~v~~v~PG~v~t~-~~~~-----------------~~~~~~~~~ 220 (248)
.+. +++..|+++|+++++|+++|+.|+.+ +||+|++|+||+++|+ +... ....+|+++
T Consensus 143 ~~~---~~~~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 219 (252)
T PRK07677 143 DAG---PGVIHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWESEEAAKRTIQSVPLGRLGTPEEI 219 (252)
T ss_pred cCC---CCCcchHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccccccccccCCHHHHHHHhccCCCCCCCCHHHH
Confidence 665 67789999999999999999999974 6999999999999953 2111 013578999
Q ss_pred HHHHHHHhhhcccccccceeeeCCee
Q psy11190 221 TAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 221 ~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
+..+..+++......+|+.+..+|..
T Consensus 220 a~~~~~l~~~~~~~~~g~~~~~~gg~ 245 (252)
T PRK07677 220 AGLAYFLLSDEAAYINGTCITMDGGQ 245 (252)
T ss_pred HHHHHHHcCccccccCCCEEEECCCe
Confidence 99999988877778999999999863
|
|
| >PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-36 Score=251.19 Aligned_cols=214 Identities=29% Similarity=0.419 Sum_probs=188.1
Q ss_pred cCC--CchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH-HHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh-cCC
Q psy11190 8 GCN--RGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL-LALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV-KDQ 83 (248)
Q Consensus 8 Gas--~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~-~~~ 83 (248)
|++ +|||+++|++|+++| ++|++.+|+.++++.. .++....+ ..++++|+++.++ ++.+++++.+.+ +
T Consensus 1 g~~~s~GiG~aia~~l~~~G----a~V~~~~~~~~~~~~~~~~l~~~~~-~~~~~~D~~~~~~-v~~~~~~~~~~~~g-- 72 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEG----ANVILTDRNEEKLADALEELAKEYG-AEVIQCDLSDEES-VEALFDEAVERFGG-- 72 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTT----EEEEEEESSHHHHHHHHHHHHHHTT-SEEEESCTTSHHH-HHHHHHHHHHHHCS--
T ss_pred CCCCCCChHHHHHHHHHHCC----CEEEEEeCChHHHHHHHHHHHHHcC-CceEeecCcchHH-HHHHHHHHHhhcCC--
Confidence 566 999999999999999 9999999999886544 44444333 4479999999999 999999999999 7
Q ss_pred CccEEEeccccCCc---cccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 84 GLNVLVNNAGIAAK---FTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 84 ~iD~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
++|+||||+|...+ ..++.+.+.++|++.+++|+.+++.++++++|+|.+ .|+||++||..+..
T Consensus 73 ~iD~lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~gsii~iss~~~~~ 139 (241)
T PF13561_consen 73 RIDILVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKK-------------GGSIINISSIAAQR 139 (241)
T ss_dssp SESEEEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHH-------------EEEEEEEEEGGGTS
T ss_pred CeEEEEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-------------CCCcccccchhhcc
Confidence 69999999998764 356777889999999999999999999999998876 58899999999887
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccC-CCeEEEEecCcceecCCCCCC-----------------CCCchhhHHH
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKG-DKIIATAMHPGWVKTDMGGSN-----------------APLEVGAATA 222 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~-~~i~v~~v~PG~v~t~~~~~~-----------------~~~~~~~~~~ 222 (248)
+. +++..|+++|+++++|+++|+.||++ +|||||+|.||+++|++.... ...+|+|++.
T Consensus 140 ~~---~~~~~y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~~~~~~~~~~~~~pl~r~~~~~evA~ 216 (241)
T PF13561_consen 140 PM---PGYSAYSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTERIPGNEEFLEELKKRIPLGRLGTPEEVAN 216 (241)
T ss_dssp BS---TTTHHHHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHHHTHHHHHHHHHHHSTTSSHBEHHHHHH
T ss_pred cC---ccchhhHHHHHHHHHHHHHHHHHhccccCeeeeeecccceeccchhccccccchhhhhhhhhccCCCcCHHHHHH
Confidence 76 77889999999999999999999999 999999999999999874321 1258999999
Q ss_pred HHHHHhhhcccccccceeeeCCe
Q psy11190 223 GIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 223 ~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
.+.+++++.....+|+.+.+||.
T Consensus 217 ~v~fL~s~~a~~itG~~i~vDGG 239 (241)
T PF13561_consen 217 AVLFLASDAASYITGQVIPVDGG 239 (241)
T ss_dssp HHHHHHSGGGTTGTSEEEEESTT
T ss_pred HHHHHhCccccCccCCeEEECCC
Confidence 99999999999999999999985
|
... |
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-35 Score=244.04 Aligned_cols=222 Identities=21% Similarity=0.266 Sum_probs=187.0
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH-HHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL-LALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|+++||||++|||++++++|+++| ++|++++|+.. ..++ .++...+.++.++++|+++.++ +..+++++.+.+
T Consensus 9 k~vlVtGas~gIG~~la~~l~~~G----~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~~ 82 (260)
T PRK12823 9 KVVVVTGAAQGIGRGVALRAAAEG----ARVVLVDRSEL-VHEVAAELRAAGGEALALTADLETYAG-AQAAMAAAVEAF 82 (260)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC----CEEEEEeCchH-HHHHHHHHHhcCCeEEEEEEeCCCHHH-HHHHHHHHHHHc
Confidence 789999999999999999999999 89999999853 3333 3333334578889999999999 999999998887
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+ ++|+||||||......++.+.+.+++++.+++|+.+++++++.++|.|.++ +.++||++||..+.
T Consensus 83 ~--~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----------~~g~iv~~sS~~~~- 148 (260)
T PRK12823 83 G--RIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQ-----------GGGAIVNVSSIATR- 148 (260)
T ss_pred C--CCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----------CCCeEEEEcCcccc-
Confidence 7 599999999965333677788999999999999999999999999999875 46899999998764
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCC---------CC-------------------
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGG---------SN------------------- 212 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~---------~~------------------- 212 (248)
+ .+...|+++|++++.|+++++.+++++||+|++|+||+++||+.+ ..
T Consensus 149 ~----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (260)
T PRK12823 149 G----INRVPYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLMK 224 (260)
T ss_pred C----CCCCccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCCcc
Confidence 2 345689999999999999999999999999999999999998521 00
Q ss_pred CCCchhhHHHHHHHHhhhcccccccceeeeCCeec
Q psy11190 213 APLEVGAATAGIIQFIQSLGEAHNGGFFEYTGKAI 247 (248)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~ 247 (248)
....|+++++.++.++++.....+|+.+..+|..+
T Consensus 225 ~~~~~~dva~~~~~l~s~~~~~~~g~~~~v~gg~~ 259 (260)
T PRK12823 225 RYGTIDEQVAAILFLASDEASYITGTVLPVGGGDL 259 (260)
T ss_pred cCCCHHHHHHHHHHHcCcccccccCcEEeecCCCC
Confidence 02368999999999998877788999999988654
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-35 Score=245.13 Aligned_cols=223 Identities=19% Similarity=0.323 Sum_probs=196.3
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhh-cCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQ-HSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|++|||||+++||++++++|+++| ++|++.+|+.++.+++.+.... +.++.++++|++|.++ ++.+++.+.+.+
T Consensus 11 k~vlItGa~g~iG~~ia~~l~~~G----~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~~ 85 (255)
T PRK07523 11 RRALVTGSSQGIGYALAEGLAQAG----AEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDA-VRAAIDAFEAEI 85 (255)
T ss_pred CEEEEECCcchHHHHHHHHHHHcC----CEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHH-HHHHHHHHHHhc
Confidence 799999999999999999999999 8999999998877766443332 4468889999999999 999999999887
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+ ++|+||||||...+ .++.+.+.++|++.+++|+.+++++++.+.+.|.++ +.++||++||..+..
T Consensus 86 ~--~~d~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----------~~g~iv~iss~~~~~ 151 (255)
T PRK07523 86 G--PIDILVNNAGMQFR-TPLEDFPADAFERLLRTNISSVFYVGQAVARHMIAR-----------GAGKIINIASVQSAL 151 (255)
T ss_pred C--CCCEEEECCCCCCC-CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHh-----------CCeEEEEEccchhcc
Confidence 7 59999999998765 778888999999999999999999999999999875 578999999998876
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC-----------------CCchhhHHHH
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA-----------------PLEVGAATAG 223 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~-----------------~~~~~~~~~~ 223 (248)
+. +++..|+++|++++.++++++.+++++||+||+|.||+++|++.+... ...|++++..
T Consensus 152 ~~---~~~~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~ 228 (255)
T PRK07523 152 AR---PGIAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVADPEFSAWLEKRTPAGRWGKVEELVGA 228 (255)
T ss_pred CC---CCCccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccCHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence 66 778899999999999999999999999999999999999999854211 2358999999
Q ss_pred HHHHhhhcccccccceeeeCCee
Q psy11190 224 IIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 224 ~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
++.++++.....+|+.+..+|..
T Consensus 229 ~~~l~~~~~~~~~G~~i~~~gg~ 251 (255)
T PRK07523 229 CVFLASDASSFVNGHVLYVDGGI 251 (255)
T ss_pred HHHHcCchhcCccCcEEEECCCe
Confidence 99999887788899999998863
|
|
| >KOG1610|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-36 Score=245.84 Aligned_cols=204 Identities=30% Similarity=0.448 Sum_probs=182.9
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|.++|||+.+|.|+.+|++|.++| ++|++.+.+++.++.+..... .++...++.|++++++ ++++.+.+++.++
T Consensus 30 k~VlITGCDSGfG~~LA~~L~~~G----f~V~Agcl~~~gae~L~~~~~-s~rl~t~~LDVT~~es-i~~a~~~V~~~l~ 103 (322)
T KOG1610|consen 30 KAVLITGCDSGFGRLLAKKLDKKG----FRVFAGCLTEEGAESLRGETK-SPRLRTLQLDVTKPES-VKEAAQWVKKHLG 103 (322)
T ss_pred cEEEEecCCcHHHHHHHHHHHhcC----CEEEEEeecCchHHHHhhhhc-CCcceeEeeccCCHHH-HHHHHHHHHHhcc
Confidence 789999999999999999999999 999999988888887755543 6788999999999999 9999999999998
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
+.++..||||||+.....+.+..+.+++++.+++|+.|++.+++.++|++++ .+||||++||+.|..+
T Consensus 104 ~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~------------arGRvVnvsS~~GR~~ 171 (322)
T KOG1610|consen 104 EDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRR------------ARGRVVNVSSVLGRVA 171 (322)
T ss_pred cccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHh------------ccCeEEEecccccCcc
Confidence 8789999999999887789999999999999999999999999999999999 4899999999999888
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCCCCchhhHHHHHHHHhh
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQ 229 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~ 229 (248)
. +..+.|++||+|++.|+.+|++|+.+.||+|..|.||.++|++.. ....++-++.+|..+.
T Consensus 172 ~---p~~g~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG~f~T~l~~---~~~~~~~~~~~w~~l~ 233 (322)
T KOG1610|consen 172 L---PALGPYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPGFFKTNLAN---PEKLEKRMKEIWERLP 233 (322)
T ss_pred C---cccccchhhHHHHHHHHHHHHHHHHhcCcEEEEeccCccccccCC---hHHHHHHHHHHHhcCC
Confidence 7 888999999999999999999999999999999999999999976 2233444444444443
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-35 Score=243.22 Aligned_cols=224 Identities=20% Similarity=0.242 Sum_probs=193.8
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHH-hhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALA-QQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
+|+++||||++|||++++++|+++| ++|++.+|+.+..+++.+.. ..+.++.++++|+++.++ +.++++.+.+.
T Consensus 11 ~k~vlVtG~s~gIG~~la~~l~~~G----~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~-i~~~~~~~~~~ 85 (255)
T PRK06113 11 GKCAIITGAGAGIGKEIAITFATAG----ASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQE-LSALADFALSK 85 (255)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC----CeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHH-HHHHHHHHHHH
Confidence 3799999999999999999999999 89999999988777664333 334578889999999999 99999998888
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
++ ++|++|||||...+ .++ +.+.+++++.+++|+.++++++++++|.|.+. +.++||++||..+.
T Consensus 86 ~~--~~d~li~~ag~~~~-~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----------~~~~iv~isS~~~~ 150 (255)
T PRK06113 86 LG--KVDILVNNAGGGGP-KPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKN-----------GGGVILTITSMAAE 150 (255)
T ss_pred cC--CCCEEEECCCCCCC-CCC-CCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhc-----------CCcEEEEEeccccc
Confidence 76 59999999998654 444 57889999999999999999999999999764 46799999999988
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC----------------CCCchhhHHHH
Q psy11190 160 IEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN----------------APLEVGAATAG 223 (248)
Q Consensus 160 ~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~----------------~~~~~~~~~~~ 223 (248)
.+. +++..|+++|+++++|+++++.++.++||+||.|.||+++|++.... ...+|+++++.
T Consensus 151 ~~~---~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~ 227 (255)
T PRK06113 151 NKN---INMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANA 227 (255)
T ss_pred CCC---CCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccccccccCHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence 766 77889999999999999999999999999999999999999975431 12478999999
Q ss_pred HHHHhhhcccccccceeeeCCeec
Q psy11190 224 IIQFIQSLGEAHNGGFFEYTGKAI 247 (248)
Q Consensus 224 ~~~~~~~~~~~~~g~~~~~~g~~~ 247 (248)
++.++++.....+|+.+..+|..+
T Consensus 228 ~~~l~~~~~~~~~G~~i~~~gg~~ 251 (255)
T PRK06113 228 ALFLCSPAASWVSGQILTVSGGGV 251 (255)
T ss_pred HHHHcCccccCccCCEEEECCCcc
Confidence 999998877889999999998643
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-35 Score=243.73 Aligned_cols=223 Identities=20% Similarity=0.215 Sum_probs=191.8
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCc-hhHHHHHH-HHhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNK-DKAVELLA-LAQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~-~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|+++||||++|||+++|++|+++| +.|++..|+. +..+.+.+ +...+.++.++++|++|.++ ++++++.+.+.
T Consensus 8 k~~lItGa~~gIG~~ia~~l~~~G----~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~-i~~~~~~~~~~ 82 (261)
T PRK08936 8 KVVVITGGSTGLGRAMAVRFGKEK----AKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESD-VVNLIQTAVKE 82 (261)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCC----CEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHH-HHHHHHHHHHH
Confidence 789999999999999999999999 8898888854 33444433 33334567889999999999 99999999888
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
++ ++|++|||||...+ .++.+.+.++|++.+++|+.+++++++.+++.|.+++ ..++||++||..+.
T Consensus 83 ~g--~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~----------~~g~iv~~sS~~~~ 149 (261)
T PRK08936 83 FG--TLDVMINNAGIENA-VPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHD----------IKGNIINMSSVHEQ 149 (261)
T ss_pred cC--CCCEEEECCCCCCC-CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC----------CCcEEEEEcccccc
Confidence 77 59999999998765 6677889999999999999999999999999998752 36899999998887
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC-----------------CCCchhhHHH
Q psy11190 160 IEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN-----------------APLEVGAATA 222 (248)
Q Consensus 160 ~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~-----------------~~~~~~~~~~ 222 (248)
.+. +++..|+++|+++..|++.++.++.++||+|++|+||+++|++.... ...+++++++
T Consensus 150 ~~~---~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~ 226 (261)
T PRK08936 150 IPW---PLFVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFADPKQRADVESMIPMGYIGKPEEIAA 226 (261)
T ss_pred CCC---CCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCCHHHHHHHHhcCCCCCCcCHHHHHH
Confidence 665 77889999999999999999999999999999999999999986421 1246899999
Q ss_pred HHHHHhhhcccccccceeeeCCe
Q psy11190 223 GIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 223 ~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
.+++++++.....+|..+..+|.
T Consensus 227 ~~~~l~s~~~~~~~G~~i~~d~g 249 (261)
T PRK08936 227 VAAWLASSEASYVTGITLFADGG 249 (261)
T ss_pred HHHHHcCcccCCccCcEEEECCC
Confidence 99999998888999999998885
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-35 Score=245.80 Aligned_cols=220 Identities=23% Similarity=0.311 Sum_probs=184.1
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|+++||||++|||++++++|+++| ++|++++|+.+.++++.+. ...++.++++|+++.++ ++.+++++.+.++
T Consensus 6 k~vlItGas~gIG~~ia~~l~~~G----~~V~~~~r~~~~~~~l~~~--~~~~~~~~~~D~~~~~~-~~~~~~~~~~~~g 78 (262)
T TIGR03325 6 EVVLVTGGASGLGRAIVDRFVAEG----ARVAVLDKSAAGLQELEAA--HGDAVVGVEGDVRSLDD-HKEAVARCVAAFG 78 (262)
T ss_pred cEEEEECCCChHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHhh--cCCceEEEEeccCCHHH-HHHHHHHHHHHhC
Confidence 799999999999999999999999 8999999998776665432 13468889999999999 9999999988887
Q ss_pred CCCccEEEeccccCCccccCCCCCh----hhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCC
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKP----EQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIM 157 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~----~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~ 157 (248)
++|+||||||......++.+.+. ++|++.+++|+.++++++++++|.|.+ .++++|+++|..
T Consensus 79 --~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~------------~~g~iv~~sS~~ 144 (262)
T TIGR03325 79 --KIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVA------------SRGSVIFTISNA 144 (262)
T ss_pred --CCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhh------------cCCCEEEEeccc
Confidence 59999999997532233333333 579999999999999999999999976 357899999998
Q ss_pred CcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC-------------------------
Q psy11190 158 GSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN------------------------- 212 (248)
Q Consensus 158 ~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~------------------------- 212 (248)
+..+. ++...|+++|+++++|+++++.+++++ ||||+|+||+++|+|..+.
T Consensus 145 ~~~~~---~~~~~Y~~sKaa~~~l~~~la~e~~~~-irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 220 (262)
T TIGR03325 145 GFYPN---GGGPLYTAAKHAVVGLVKELAFELAPY-VRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSVLPIG 220 (262)
T ss_pred eecCC---CCCchhHHHHHHHHHHHHHHHHhhccC-eEEEEEecCCCcCCCccccccccccccccccchhhhhhhcCCCC
Confidence 88766 677899999999999999999999987 9999999999999985310
Q ss_pred CCCchhhHHHHHHHHhhhc-ccccccceeeeCCee
Q psy11190 213 APLEVGAATAGIIQFIQSL-GEAHNGGFFEYTGKA 246 (248)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~g~~ 246 (248)
...+|++++..+++++++. ....+|+.+..||..
T Consensus 221 r~~~p~eva~~~~~l~s~~~~~~~tG~~i~vdgg~ 255 (262)
T TIGR03325 221 RMPDAEEYTGAYVFFATRGDTVPATGAVLNYDGGM 255 (262)
T ss_pred CCCChHHhhhheeeeecCCCcccccceEEEecCCe
Confidence 0246899999999988864 456899999999863
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >TIGR01500 sepiapter_red sepiapterin reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-35 Score=244.69 Aligned_cols=223 Identities=22% Similarity=0.323 Sum_probs=184.9
Q ss_pred eEEEecCCCchhHHHHHHHHh----CCCCCCceEEEeecCchhHHHHHHHHhh---cCCceeEEeeccCCchhhhhHHHH
Q psy11190 3 SILITGCNRGLGLGMIKVLVG----LGNNQPAHIFATCRNKDKAVELLALAQQ---HSNLHVIELDVTDFSKQQDVLFKD 75 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~----~g~~~~~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~v~~~~~~ 75 (248)
+++||||++|||+++|++|++ +| ++|++++|+.+.++++.+.+.. ..++.++++|+++.++ ++.+++.
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g----~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~-v~~~~~~ 76 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPG----SVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAG-LEQLLKA 76 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCC----cEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHH-HHHHHHH
Confidence 689999999999999999997 67 8999999998888877544332 3367889999999999 9999999
Q ss_pred hhhhhcCC--CccEEEeccccCCcc-ccCCCC-ChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEE
Q psy11190 76 ISDVVKDQ--GLNVLVNNAGIAAKF-TRLGLL-KPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIV 151 (248)
Q Consensus 76 i~~~~~~~--~iD~lv~~ag~~~~~-~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv 151 (248)
+.+.++.. +.|+||||||..... ....+. +.++|++.+++|+.+++++++.++|.|+++.. ..++|+
T Consensus 77 ~~~~~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~---------~~~~iv 147 (256)
T TIGR01500 77 LRELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPG---------LNRTVV 147 (256)
T ss_pred HHhccccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCC---------CCCEEE
Confidence 98876521 247999999975432 223333 46899999999999999999999999986410 257899
Q ss_pred EeecCCCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC--------------------
Q psy11190 152 NVSSIMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS-------------------- 211 (248)
Q Consensus 152 ~vss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~-------------------- 211 (248)
++||..+..+. +++..|+++|+++++|+++|+.|++++||+||+|+||+++|+|.+.
T Consensus 148 ~isS~~~~~~~---~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (256)
T TIGR01500 148 NISSLCAIQPF---KGWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQVREESVDPDMRKGLQELKAK 224 (256)
T ss_pred EECCHHhCCCC---CCchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHHHHHhcCChhHHHHHHHHHhc
Confidence 99999988776 7788999999999999999999999999999999999999998641
Q ss_pred CCCCchhhHHHHHHHHhhhcccccccceeeeC
Q psy11190 212 NAPLEVGAATAGIIQFIQSLGEAHNGGFFEYT 243 (248)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 243 (248)
....+|+|++..++.++.+ .+..+|++++|.
T Consensus 225 ~~~~~p~eva~~~~~l~~~-~~~~~G~~~~~~ 255 (256)
T TIGR01500 225 GKLVDPKVSAQKLLSLLEK-DKFKSGAHVDYY 255 (256)
T ss_pred CCCCCHHHHHHHHHHHHhc-CCcCCcceeecc
Confidence 1146899999999999974 567899999874
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. |
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-35 Score=243.57 Aligned_cols=218 Identities=23% Similarity=0.283 Sum_probs=188.0
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhh--cCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQ--HSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|+++|||+++|||++++++|+++| ++|++++|+.++++++.+.+.. ..++.++++|+++.++ ++.+++.
T Consensus 8 k~vlItG~~~giG~~ia~~l~~~G----~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~-~~~~~~~---- 78 (259)
T PRK06125 8 KRVLITGASKGIGAAAAEAFAAEG----CHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEA-REQLAAE---- 78 (259)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcC----CEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHH-HHHHHHH----
Confidence 789999999999999999999999 8999999998877776443332 3468899999999988 8777654
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
++ ++|++|||||...+ .++.+.+.++|++.+++|+.++++++++++|.|.++ +.++||++||..+.
T Consensus 79 ~g--~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----------~~g~iv~iss~~~~ 144 (259)
T PRK06125 79 AG--DIDILVNNAGAIPG-GGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKAR-----------GSGVIVNVIGAAGE 144 (259)
T ss_pred hC--CCCEEEECCCCCCC-CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----------CCcEEEEecCcccc
Confidence 34 59999999998754 678889999999999999999999999999999875 46899999999887
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC-------------------------CCC
Q psy11190 160 IEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS-------------------------NAP 214 (248)
Q Consensus 160 ~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~-------------------------~~~ 214 (248)
.+. +++..|+++|+++.+|+++++.|+.++||+||+|+||+++|++... ...
T Consensus 145 ~~~---~~~~~y~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (259)
T PRK06125 145 NPD---ADYICGSAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLAGLPLGRP 221 (259)
T ss_pred CCC---CCchHhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccHHHHHHHHhhhhcccCCHHHHHHHhccCCcCCC
Confidence 665 6678899999999999999999999999999999999999995321 013
Q ss_pred CchhhHHHHHHHHhhhcccccccceeeeCCe
Q psy11190 215 LEVGAATAGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
.+|+++++.+++++++.....+|+++.++|.
T Consensus 222 ~~~~~va~~~~~l~~~~~~~~~G~~i~vdgg 252 (259)
T PRK06125 222 ATPEEVADLVAFLASPRSGYTSGTVVTVDGG 252 (259)
T ss_pred cCHHHHHHHHHHHcCchhccccCceEEecCC
Confidence 4799999999999987778899999999986
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-35 Score=242.85 Aligned_cols=223 Identities=26% Similarity=0.373 Sum_probs=194.8
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHH-hh--cCCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALA-QQ--HSNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~-~~--~~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
|+++||||++|||++++++|+++| ++|++++|+.++++++.+.. .. +.++.++++|+++.++ ++.+++++.+
T Consensus 10 k~~lItGa~~gIG~~~a~~l~~~G----~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~-~~~~~~~~~~ 84 (257)
T PRK09242 10 QTALITGASKGIGLAIAREFLGLG----ADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDED-RRAILDWVED 84 (257)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcC----CEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHH-HHHHHHHHHH
Confidence 789999999999999999999999 89999999988877764333 22 3578889999999999 9999999998
Q ss_pred hhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 79 VVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
.++ ++|+||||||.... .+..+.+.+++++.+.+|+.++++++++++|.|+++ +.++||++||..+
T Consensus 85 ~~g--~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----------~~~~ii~~sS~~~ 150 (257)
T PRK09242 85 HWD--GLHILVNNAGGNIR-KAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQH-----------ASSAIVNIGSVSG 150 (257)
T ss_pred HcC--CCCEEEECCCCCCC-CChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-----------CCceEEEECcccc
Confidence 887 59999999998653 566778999999999999999999999999999875 5689999999998
Q ss_pred cccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC-----------------CCchhhHH
Q psy11190 159 SIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA-----------------PLEVGAAT 221 (248)
Q Consensus 159 ~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~-----------------~~~~~~~~ 221 (248)
..+. ++...|+++|++++.|+++++.++.++||++++|.||+++|++..... ..+|++++
T Consensus 151 ~~~~---~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va 227 (257)
T PRK09242 151 LTHV---RSGAPYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSDPDYYEQVIERTPMRRVGEPEEVA 227 (257)
T ss_pred CCCC---CCCcchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCChHHHHHHHhcCCCCCCcCHHHHH
Confidence 8776 778899999999999999999999999999999999999999865321 23789999
Q ss_pred HHHHHHhhhcccccccceeeeCCee
Q psy11190 222 AGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 222 ~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
..+..++++.....+|+.+..+|..
T Consensus 228 ~~~~~l~~~~~~~~~g~~i~~~gg~ 252 (257)
T PRK09242 228 AAVAFLCMPAASYITGQCIAVDGGF 252 (257)
T ss_pred HHHHHHhCcccccccCCEEEECCCe
Confidence 9999999877777899999988853
|
|
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-35 Score=250.66 Aligned_cols=210 Identities=21% Similarity=0.300 Sum_probs=173.1
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHh-hc--CCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQ-QH--SNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~-~~--~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
|+++||||++|||+++|++|+++| ++|++++|+.++++++.+.+. .. .++..+.+|+++ + +...++++.+
T Consensus 54 ~~~lITGAs~GIG~alA~~La~~G----~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~--~-~~~~~~~l~~ 126 (320)
T PLN02780 54 SWALVTGPTDGIGKGFAFQLARKG----LNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG--D-IDEGVKRIKE 126 (320)
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC----CCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC--C-cHHHHHHHHH
Confidence 689999999999999999999999 899999999998888744332 22 357788999985 2 3444555555
Q ss_pred hhcCCCccEEEeccccCCc-cccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCC
Q psy11190 79 VVKDQGLNVLVNNAGIAAK-FTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIM 157 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~ 157 (248)
.++..++|+||||||...+ ...+.+.+.+++++.+++|+.+++.+++.++|.|.++ +.|+||++||.+
T Consensus 127 ~~~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-----------~~g~IV~iSS~a 195 (320)
T PLN02780 127 TIEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKR-----------KKGAIINIGSGA 195 (320)
T ss_pred HhcCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhc-----------CCcEEEEEechh
Confidence 5543347899999998643 2457788999999999999999999999999999875 579999999998
Q ss_pred CcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC----CCCchhhHHHHHHHHhhh
Q psy11190 158 GSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN----APLEVGAATAGIIQFIQS 230 (248)
Q Consensus 158 ~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~~~~~~~~ 230 (248)
+.... +.+....|++||+++++|+++|+.|++++||+|++|+||+++|+|.... ...+|+++++.++..+..
T Consensus 196 ~~~~~-~~p~~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~~~~~~~~~~~p~~~A~~~~~~~~~ 271 (320)
T PLN02780 196 AIVIP-SDPLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASIRRSSFLVPSSDGYARAALRWVGY 271 (320)
T ss_pred hccCC-CCccchHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCcccccCCCCCCCCHHHHHHHHHHHhCC
Confidence 86411 1256789999999999999999999999999999999999999997622 245899999999999854
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-35 Score=242.43 Aligned_cols=224 Identities=23% Similarity=0.363 Sum_probs=197.5
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHH-HHhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
+|+++||||+++||++++++|+++| ++|++++|+.+.++++.+ +...+.++.++++|+++.++ +..+++++.+.
T Consensus 11 ~k~ilItGas~~IG~~la~~l~~~G----~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-~~~~~~~~~~~ 85 (256)
T PRK06124 11 GQVALVTGSARGLGFEIARALAGAG----AHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEA-VAAAFARIDAE 85 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHcC----CeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHH-HHHHHHHHHHh
Confidence 4799999999999999999999999 899999999887776643 33334578899999999999 99999999988
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
++ ++|++|||+|...+ .++.+.+.++|++.+++|+.+++.+++.+++.|.++ +.+++|++||..+.
T Consensus 86 ~~--~id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----------~~~~iv~~ss~~~~ 151 (256)
T PRK06124 86 HG--RLDILVNNVGARDR-RPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQ-----------GYGRIIAITSIAGQ 151 (256)
T ss_pred cC--CCCEEEECCCCCCC-CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----------CCcEEEEEeechhc
Confidence 87 59999999998765 677888999999999999999999999999999875 56899999999988
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC-----------------CCchhhHHH
Q psy11190 160 IEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA-----------------PLEVGAATA 222 (248)
Q Consensus 160 ~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~-----------------~~~~~~~~~ 222 (248)
.+. +++..|+++|+++..+++.++.|+.++||++++|+||+++|++.+... ...|++++.
T Consensus 152 ~~~---~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 228 (256)
T PRK06124 152 VAR---AGDAVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAADPAVGPWLAQRTPLGRWGRPEEIAG 228 (256)
T ss_pred cCC---CCccHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccChHHHHHHHhcCCCCCCCCHHHHHH
Confidence 776 788999999999999999999999999999999999999999754221 256999999
Q ss_pred HHHHHhhhcccccccceeeeCCee
Q psy11190 223 GIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 223 ~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
.++.++++.....+|+++.+||..
T Consensus 229 ~~~~l~~~~~~~~~G~~i~~dgg~ 252 (256)
T PRK06124 229 AAVFLASPAASYVNGHVLAVDGGY 252 (256)
T ss_pred HHHHHcCcccCCcCCCEEEECCCc
Confidence 999999988888999999999864
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-34 Score=239.79 Aligned_cols=228 Identities=24% Similarity=0.316 Sum_probs=190.0
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEe-ecCchhHHHHHHHH-hhcCCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFAT-CRNKDKAVELLALA-QQHSNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~-~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
||+++||||++|||.++++.|+++| ++|++. .|+.+.++.+.+.. ....++.++++|+++.++ ++.+++++.+
T Consensus 2 ~k~ilItGas~giG~~la~~l~~~g----~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-~~~~~~~~~~ 76 (248)
T PRK06947 2 RKVVLITGASRGIGRATAVLAAARG----WSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEAD-VIAMFDAVQS 76 (248)
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHCC----CEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHH-HHHHHHHHHH
Confidence 5799999999999999999999999 788776 46666666553333 334578899999999999 9999999988
Q ss_pred hhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 79 VVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
.++ ++|+||||||...+...+.+.+.++++..+++|+.+++++++.+++.+..+.. .+.++||++||..+
T Consensus 77 ~~~--~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------~~~~~ii~~sS~~~ 146 (248)
T PRK06947 77 AFG--RLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRG--------GRGGAIVNVSSIAS 146 (248)
T ss_pred hcC--CCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCC--------CCCcEEEEECchhh
Confidence 776 59999999998755455677889999999999999999999999998875421 12578999999988
Q ss_pred cccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC----------------CCCchhhHHH
Q psy11190 159 SIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN----------------APLEVGAATA 222 (248)
Q Consensus 159 ~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~----------------~~~~~~~~~~ 222 (248)
..+.. .++..|+++|+++++|+++++.++.++||+|+.|.||+++|++.... ...+++++++
T Consensus 147 ~~~~~--~~~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~e~va~ 224 (248)
T PRK06947 147 RLGSP--NEYVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGGQPGRAARLGAQTPLGRAGEADEVAE 224 (248)
T ss_pred cCCCC--CCCcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccCCHHHHHHHhhcCCCCCCcCHHHHHH
Confidence 77651 23568999999999999999999999999999999999999985421 1347899999
Q ss_pred HHHHHhhhcccccccceeeeCCe
Q psy11190 223 GIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 223 ~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
.++.++.......+|.++.++|.
T Consensus 225 ~~~~l~~~~~~~~~G~~~~~~gg 247 (248)
T PRK06947 225 TIVWLLSDAASYVTGALLDVGGG 247 (248)
T ss_pred HHHHHcCccccCcCCceEeeCCC
Confidence 99999988888899999999884
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=240.77 Aligned_cols=224 Identities=25% Similarity=0.283 Sum_probs=196.5
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHH-HHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|+++||||+|+||++++++|+++| ++|++++|+.+.++++.+ +...+.++.++.+|++|.++ ++++++++.+.+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G----~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~-i~~~~~~~~~~~ 75 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDG----FAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQ-VFSAIDQAAEKF 75 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH-HHHHHHHHHHHc
Confidence 689999999999999999999999 899999999877766643 33334578899999999999 999999999888
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+ ++|+||||||.... .++.+.+.+++++.+++|+.+++.+++.+++.|.+++ ..++++++||..+..
T Consensus 76 ~--~id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~----------~~~~iv~~sS~~~~~ 142 (254)
T TIGR02415 76 G--GFDVMVNNAGVAPI-TPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQG----------HGGKIINAASIAGHE 142 (254)
T ss_pred C--CCCEEEECCCcCCC-CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCC----------CCeEEEEecchhhcC
Confidence 7 59999999998765 6777889999999999999999999999999998752 347999999999887
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC--------------------------CC
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN--------------------------AP 214 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~--------------------------~~ 214 (248)
+. +++..|+++|++++.|++.++.++.++||+|+.|+||+++|++.... ..
T Consensus 143 ~~---~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (254)
T TIGR02415 143 GN---PILSAYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIALGRP 219 (254)
T ss_pred CC---CCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChhhhhhhhhhhhcccCchHHHHHHHHhhCCCCCC
Confidence 76 78899999999999999999999999999999999999999985321 14
Q ss_pred CchhhHHHHHHHHhhhcccccccceeeeCCee
Q psy11190 215 LEVGAATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
.+|+++++.+..+++......+|+++.+||..
T Consensus 220 ~~~~~~a~~~~~l~~~~~~~~~g~~~~~d~g~ 251 (254)
T TIGR02415 220 SEPEDVAGLVSFLASEDSDYITGQSILVDGGM 251 (254)
T ss_pred CCHHHHHHHHHhhcccccCCccCcEEEecCCc
Confidence 57899999999999988888999999999853
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-35 Score=238.22 Aligned_cols=211 Identities=14% Similarity=0.075 Sum_probs=176.1
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
++++||||++|||+++++.|+++| ++|++.+|+.++++++.+.. ++.++++|+++.++ ++.+++++.+
T Consensus 1 m~vlItGas~giG~~ia~~l~~~g----~~v~~~~r~~~~~~~~~~~~----~~~~~~~D~~~~~~-v~~~~~~~~~--- 68 (223)
T PRK05884 1 VEVLVTGGDTDLGRTIAEGFRNDG----HKVTLVGARRDDLEVAAKEL----DVDAIVCDNTDPAS-LEEARGLFPH--- 68 (223)
T ss_pred CeEEEEeCCchHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHhc----cCcEEecCCCCHHH-HHHHHHHHhh---
Confidence 148999999999999999999999 89999999987766553322 36688999999998 8888777653
Q ss_pred CCCccEEEeccccCCc-----cccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecC
Q psy11190 82 DQGLNVLVNNAGIAAK-----FTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSI 156 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~-----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~ 156 (248)
++|+||||||.... ...+.+ +.++|++.+++|+.+++++++.++|.|.+ .|+||++||.
T Consensus 69 --~id~lv~~ag~~~~~~~~~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~~~~-------------~g~Iv~isS~ 132 (223)
T PRK05884 69 --HLDTIVNVPAPSWDAGDPRTYSLAD-TANAWRNALDATVLSAVLTVQSVGDHLRS-------------GGSIISVVPE 132 (223)
T ss_pred --cCcEEEECCCccccCCCCcccchhc-CHHHHHHHHHHHHHHHHHHHHHHHHHhhc-------------CCeEEEEecC
Confidence 49999999985321 012333 57899999999999999999999999953 4899999997
Q ss_pred CCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC---CCCCchhhHHHHHHHHhhhccc
Q psy11190 157 MGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS---NAPLEVGAATAGIIQFIQSLGE 233 (248)
Q Consensus 157 ~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 233 (248)
+ . +....|+++|+++.+|+++++.|+.++|||||+|+||+++|++.+. .+...|++++..+.+++++.+.
T Consensus 133 ~----~---~~~~~Y~asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~~~~~~~p~~~~~~ia~~~~~l~s~~~~ 205 (223)
T PRK05884 133 N----P---PAGSAEAAIKAALSNWTAGQAAVFGTRGITINAVACGRSVQPGYDGLSRTPPPVAAEIARLALFLTTPAAR 205 (223)
T ss_pred C----C---CCccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccCchhhhhccCCCCCCHHHHHHHHHHHcCchhh
Confidence 6 2 4567899999999999999999999999999999999999997543 2234789999999999998888
Q ss_pred ccccceeeeCCeec
Q psy11190 234 AHNGGFFEYTGKAI 247 (248)
Q Consensus 234 ~~~g~~~~~~g~~~ 247 (248)
..+|+.+.+||..+
T Consensus 206 ~v~G~~i~vdgg~~ 219 (223)
T PRK05884 206 HITGQTLHVSHGAL 219 (223)
T ss_pred ccCCcEEEeCCCee
Confidence 99999999998754
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-35 Score=245.08 Aligned_cols=209 Identities=18% Similarity=0.230 Sum_probs=182.8
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHH-HHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|++|||||++|||++++++|+++| ++|++.+|+.++++++.+ +...+.++.++++|++|.++ +..+++++.+.+
T Consensus 7 k~vlVTGas~gIG~ala~~La~~G----~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~-v~~~~~~~~~~~ 81 (275)
T PRK05876 7 RGAVITGGASGIGLATGTEFARRG----ARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREE-VTHLADEAFRLL 81 (275)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHH-HHHHHHHHHHHc
Confidence 689999999999999999999999 899999999888777643 33334468889999999999 999999999888
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+ ++|+||||||.... ..+.+.+.++|++.+++|+.+++++++.++|.|.+++ ..|+||++||.++..
T Consensus 82 g--~id~li~nAg~~~~-~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~----------~~g~iv~isS~~~~~ 148 (275)
T PRK05876 82 G--HVDVVFSNAGIVVG-GPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQG----------TGGHVVFTASFAGLV 148 (275)
T ss_pred C--CCCEEEECCCcCCC-CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC----------CCCEEEEeCChhhcc
Confidence 7 59999999998765 6778889999999999999999999999999998752 268999999999887
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC------------------------CCCc
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN------------------------APLE 216 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~------------------------~~~~ 216 (248)
+. ++...|+++|+++.+|+++|+.|+.++||+|++|+||+++|++.... ...+
T Consensus 149 ~~---~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (275)
T PRK05876 149 PN---AGLGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLG 225 (275)
T ss_pred CC---CCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchhhhcCccccccccccccccccccccCCC
Confidence 76 78889999999999999999999999999999999999999975321 1357
Q ss_pred hhhHHHHHHHHhhhc
Q psy11190 217 VGAATAGIIQFIQSL 231 (248)
Q Consensus 217 ~~~~~~~~~~~~~~~ 231 (248)
|+++++.++..+...
T Consensus 226 ~~dva~~~~~ai~~~ 240 (275)
T PRK05876 226 VDDIAQLTADAILAN 240 (275)
T ss_pred HHHHHHHHHHHHHcC
Confidence 999999999888653
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-35 Score=242.92 Aligned_cols=223 Identities=24% Similarity=0.278 Sum_probs=190.7
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|+++||||++|||++++++|+++| ++|++++|+.+..+...++...+.++.++++|+++.++ ++.+++++.+.++
T Consensus 7 ~~~lItG~s~giG~~la~~l~~~G----~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-v~~~~~~~~~~~~ 81 (263)
T PRK08226 7 KTALITGALQGIGEGIARVFARHG----ANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPAS-VAAAIKRAKEKEG 81 (263)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCC----CEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHH-HHHHHHHHHHHcC
Confidence 789999999999999999999999 89999999875332223444335578889999999999 9999999999887
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc-c
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS-I 160 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~-~ 160 (248)
++|+||||||.... .++.+.+.+++++.+++|+.+++.+++.+++.+.+. +.++|+++||..+. .
T Consensus 82 --~id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----------~~~~iv~isS~~~~~~ 147 (263)
T PRK08226 82 --RIDILVNNAGVCRL-GSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIAR-----------KDGRIVMMSSVTGDMV 147 (263)
T ss_pred --CCCEEEECCCcCCC-CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-----------CCcEEEEECcHHhccc
Confidence 59999999998754 677788899999999999999999999999998764 46789999998774 3
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC-----------------------CCCch
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN-----------------------APLEV 217 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~-----------------------~~~~~ 217 (248)
+. +++..|+++|+++++|+++++.++.++||+|++|+||+++|++.+.. ...+|
T Consensus 148 ~~---~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 224 (263)
T PRK08226 148 AD---PGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPLRRLADP 224 (263)
T ss_pred CC---CCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccCCCCCCCCH
Confidence 33 66789999999999999999999999999999999999999975321 02479
Q ss_pred hhHHHHHHHHhhhcccccccceeeeCCee
Q psy11190 218 GAATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
+++++.+.++++......+|+.+..||..
T Consensus 225 ~~va~~~~~l~~~~~~~~~g~~i~~dgg~ 253 (263)
T PRK08226 225 LEVGELAAFLASDESSYLTGTQNVIDGGS 253 (263)
T ss_pred HHHHHHHHHHcCchhcCCcCceEeECCCc
Confidence 99999999999887889999999999863
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-34 Score=240.51 Aligned_cols=220 Identities=20% Similarity=0.244 Sum_probs=192.1
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||+++||.+++++|+++| ++|++++|+.+......+.. ..++.++++|+++.++ ++.+++++.+.++
T Consensus 16 k~vlItGas~~IG~~la~~l~~~G----~~Vi~~~r~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~-~~~~~~~~~~~~~ 88 (255)
T PRK06841 16 KVAVVTGGASGIGHAIAELFAAKG----ARVALLDRSEDVAEVAAQLL--GGNAKGLVCDVSDSQS-VEAAVAAVISAFG 88 (255)
T ss_pred CEEEEECCCChHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHhh--CCceEEEEecCCCHHH-HHHHHHHHHHHhC
Confidence 689999999999999999999999 89999999876433223322 3456789999999999 9999999988876
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|++|||||.... .++.+.+.+++++.+++|+.+++++++.+++.|.++ +.++||++||..+..+
T Consensus 89 --~~d~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----------~~~~iv~~sS~~~~~~ 154 (255)
T PRK06841 89 --RIDILVNSAGVALL-APAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAA-----------GGGKIVNLASQAGVVA 154 (255)
T ss_pred --CCCEEEECCCCCCC-CChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhc-----------CCceEEEEcchhhccC
Confidence 59999999998754 667778899999999999999999999999999875 5689999999988877
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC----------------CCCchhhHHHHHH
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN----------------APLEVGAATAGII 225 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~----------------~~~~~~~~~~~~~ 225 (248)
. +.+..|+++|+++++|+++++.+++++||+||+|+||+++|++.+.. ...+|+++++.++
T Consensus 155 ~---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~ 231 (255)
T PRK06841 155 L---ERHVAYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAWAGEKGERAKKLIPAGRFAYPEEIAAAAL 231 (255)
T ss_pred C---CCCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccccchhHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence 6 77889999999999999999999999999999999999999985421 1357999999999
Q ss_pred HHhhhcccccccceeeeCCe
Q psy11190 226 QFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 226 ~~~~~~~~~~~g~~~~~~g~ 245 (248)
.++++.....+|+.+.++|.
T Consensus 232 ~l~~~~~~~~~G~~i~~dgg 251 (255)
T PRK06841 232 FLASDAAAMITGENLVIDGG 251 (255)
T ss_pred HHcCccccCccCCEEEECCC
Confidence 99998888999999999985
|
|
| >PLN00015 protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-35 Score=249.43 Aligned_cols=226 Identities=21% Similarity=0.295 Sum_probs=185.9
Q ss_pred EEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHh-hcCCceeEEeeccCCchhhhhHHHHhhhhhcCC
Q psy11190 5 LITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQ-QHSNLHVIELDVTDFSKQQDVLFKDISDVVKDQ 83 (248)
Q Consensus 5 lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~~~ 83 (248)
+||||++|||++++++|+++|. ++|++.+|+.++++++.+.+. ...++.++++|++|.++ ++++++++.+.++
T Consensus 1 lITGas~GIG~aia~~l~~~G~---~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~-v~~~~~~~~~~~~-- 74 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGK---WHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDS-VRQFVDNFRRSGR-- 74 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCC---CEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHH-HHHHHHHHHhcCC--
Confidence 6999999999999999999884 689999999887776644332 23467889999999999 9999999987665
Q ss_pred CccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcccc-
Q psy11190 84 GLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIED- 162 (248)
Q Consensus 84 ~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~~- 162 (248)
++|+||||||+..+..+..+.+.++|++.+++|+.+++++++.++|.|.+++. ..|+||++||..+..+.
T Consensus 75 ~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~---------~~g~IV~vsS~~~~~~~~ 145 (308)
T PLN00015 75 PLDVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDY---------PSKRLIIVGSITGNTNTL 145 (308)
T ss_pred CCCEEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC---------CCCEEEEEeccccccccc
Confidence 59999999998644345667889999999999999999999999999987410 15899999998775320
Q ss_pred -------------------------------cCCCCCccchhhHHHHHHHHHHHHhhccC-CCeEEEEecCcce-ecCCC
Q psy11190 163 -------------------------------NTQGGFHPYRCSKAALNAATRSLSIDLKG-DKIIATAMHPGWV-KTDMG 209 (248)
Q Consensus 163 -------------------------------~~~~~~~~y~~sK~a~~~~~~~la~e~~~-~~i~v~~v~PG~v-~t~~~ 209 (248)
..+.++..|++||++...+++.+++++.+ +||+|++|+||+| +|+|.
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~ 225 (308)
T PLN00015 146 AGNVPPKANLGDLRGLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLF 225 (308)
T ss_pred cccCCCccchhhhhhhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCcccc
Confidence 01124567999999999999999999975 6999999999999 78886
Q ss_pred CCC-----------------CCCchhhHHHHHHHHhhhcccccccceeeeCCe
Q psy11190 210 GSN-----------------APLEVGAATAGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 210 ~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
+.. ...+|++.++.++.++.+.....+|+|+.++|.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~l~~~~~~~~~G~~~~~~g~ 278 (308)
T PLN00015 226 REHIPLFRLLFPPFQKYITKGYVSEEEAGKRLAQVVSDPSLTKSGVYWSWNGG 278 (308)
T ss_pred ccccHHHHHHHHHHHHHHhcccccHHHhhhhhhhhccccccCCCccccccCCc
Confidence 532 146899999999999988777789999999875
|
|
| >PRK06300 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-35 Score=248.02 Aligned_cols=222 Identities=15% Similarity=0.162 Sum_probs=176.5
Q ss_pred CceEEEecCC--CchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHH-----------HHhhcC-----CceeEEeec
Q psy11190 1 MKSILITGCN--RGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-----------LAQQHS-----NLHVIELDV 62 (248)
Q Consensus 1 ~k~~lVtGas--~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~-----------~~~~~~-----~~~~~~~D~ 62 (248)
.|+++|||++ +|||+++|+.|+++| ++|++.++.+ .+..... ....+. ++..+..|+
T Consensus 8 gk~alITGa~~~~GIG~a~A~~la~~G----a~Vvv~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~ 82 (299)
T PRK06300 8 GKIAFIAGIGDDQGYGWGIAKALAEAG----ATILVGTWVP-IYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASF 82 (299)
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHCC----CEEEEEeccc-hhhhhhhhcccccccccccccccchhhhhhHHHhhhhc
Confidence 3789999996 999999999999999 8999977542 1111100 000011 122234555
Q ss_pred cCCc------------------hhhhhHHHHhhhhhcCCCccEEEeccccCCc-cccCCCCChhhhhheeeecchhhHHH
Q psy11190 63 TDFS------------------KQQDVLFKDISDVVKDQGLNVLVNNAGIAAK-FTRLGLLKPEQMTDHFLVNVTAPLML 123 (248)
Q Consensus 63 ~~~~------------------~~v~~~~~~i~~~~~~~~iD~lv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l 123 (248)
++.+ + ++.+++++.+.+| ++|+||||||.... ..++.+++.++|++.+++|+.+++++
T Consensus 83 ~~~~~v~~~i~~~~~~~~~~~~s-i~~~~~~v~~~~G--~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l 159 (299)
T PRK06300 83 DTPEDVPEEIRENKRYKDLSGYT-ISEVAEQVKKDFG--HIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSL 159 (299)
T ss_pred CCCEEeecccCccccccCCCHHH-HHHHHHHHHHHcC--CCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHH
Confidence 5554 4 7889999999888 59999999987532 36778899999999999999999999
Q ss_pred HHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcccccCCCCCc-cchhhHHHHHHHHHHHHhhccC-CCeEEEEecC
Q psy11190 124 TKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFH-PYRCSKAALNAATRSLSIDLKG-DKIIATAMHP 201 (248)
Q Consensus 124 ~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~~~~~~~~~-~y~~sK~a~~~~~~~la~e~~~-~~i~v~~v~P 201 (248)
+++++|.|.+ .|+|++++|..+..+. +++. .|+++|+++.+|+++|+.|+++ +|||||+|+|
T Consensus 160 ~~a~~p~m~~-------------~G~ii~iss~~~~~~~---p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~P 223 (299)
T PRK06300 160 LSHFGPIMNP-------------GGSTISLTYLASMRAV---PGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISA 223 (299)
T ss_pred HHHHHHHhhc-------------CCeEEEEeehhhcCcC---CCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEe
Confidence 9999999964 4789999999887765 5554 7999999999999999999987 5999999999
Q ss_pred cceecCCCCCC-----------------CCCchhhHHHHHHHHhhhcccccccceeeeCCee
Q psy11190 202 GWVKTDMGGSN-----------------APLEVGAATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 202 G~v~t~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
|+++|++.... ...+|++++..+.+++++.....+|+.+..+|..
T Consensus 224 G~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~ 285 (299)
T PRK06300 224 GPLASRAGKAIGFIERMVDYYQDWAPLPEPMEAEQVGAAAAFLVSPLASAITGETLYVDHGA 285 (299)
T ss_pred CCccChhhhcccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence 99999986321 1357999999999999888888999999999863
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-34 Score=236.39 Aligned_cols=219 Identities=18% Similarity=0.270 Sum_probs=183.1
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
+|++|||||++|||++++++|+++| ++|++.+|+.++..+ ++.. ..+.++.+|++|.++ ++.+++++.+.+
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G----~~V~~~~r~~~~~~~--~~~~--~~~~~~~~D~~~~~~-~~~~~~~~~~~~ 72 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQG----QPVIVSYRTHYPAID--GLRQ--AGAQCIQADFSTNAG-IMAFIDELKQHT 72 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCC----CeEEEEeCCchhHHH--HHHH--cCCEEEEcCCCCHHH-HHHHHHHHHhhC
Confidence 3699999999999999999999999 899999998764322 2211 236789999999999 999999999887
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+ ++|++|||||...+ ....+.+.++|++.+++|+.+++.+++.++|.|.+++. +.++|+++||..+..
T Consensus 73 ~--~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~---------~~g~iv~~ss~~~~~ 140 (236)
T PRK06483 73 D--GLRAIIHNASDWLA-EKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGH---------AASDIIHITDYVVEK 140 (236)
T ss_pred C--CccEEEECCccccC-CCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCC---------CCceEEEEcchhhcc
Confidence 6 59999999997654 44556788999999999999999999999999987410 257899999988876
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC-------------CCCchhhHHHHHHHH
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN-------------APLEVGAATAGIIQF 227 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~-------------~~~~~~~~~~~~~~~ 227 (248)
+. +++..|+++|+++++|+++++.|+++ +||||+|+||++.|+..... ....|+++++.+.++
T Consensus 141 ~~---~~~~~Y~asKaal~~l~~~~a~e~~~-~irvn~v~Pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l 216 (236)
T PRK06483 141 GS---DKHIAYAASKAALDNMTLSFAAKLAP-EVKVNSIAPALILFNEGDDAAYRQKALAKSLLKIEPGEEEIIDLVDYL 216 (236)
T ss_pred CC---CCCccHHHHHHHHHHHHHHHHHHHCC-CcEEEEEccCceecCCCCCHHHHHHHhccCccccCCCHHHHHHHHHHH
Confidence 65 77889999999999999999999987 59999999999988653211 134799999999999
Q ss_pred hhhcccccccceeeeCCee
Q psy11190 228 IQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 228 ~~~~~~~~~g~~~~~~g~~ 246 (248)
++ ....+|+.+..||..
T Consensus 217 ~~--~~~~~G~~i~vdgg~ 233 (236)
T PRK06483 217 LT--SCYVTGRSLPVDGGR 233 (236)
T ss_pred hc--CCCcCCcEEEeCccc
Confidence 96 467899999999864
|
|
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-34 Score=246.71 Aligned_cols=229 Identities=19% Similarity=0.280 Sum_probs=186.7
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHh-hcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQ-QHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|+++||||++|||++++++|+++|. ++|++++|+.++++++.+... ...++.++.+|+++.++ ++.+++++.+.+
T Consensus 4 k~vlITGas~GIG~aia~~L~~~G~---~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~-v~~~~~~~~~~~ 79 (314)
T TIGR01289 4 PTVIITGASSGLGLYAAKALAATGE---WHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDS-VRQFVQQFRESG 79 (314)
T ss_pred CEEEEECCCChHHHHHHHHHHHcCC---CEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHH-HHHHHHHHHHhC
Confidence 6899999999999999999999884 689999999887776643332 23467889999999999 999999998876
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+ ++|+||||||+..+.....+.+.++|++.+++|+.+++++++.++|.|.+++. +.++||++||..+..
T Consensus 80 ~--~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~---------~~g~IV~vsS~~~~~ 148 (314)
T TIGR01289 80 R--PLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPN---------KDKRLIIVGSITGNT 148 (314)
T ss_pred C--CCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCC---------CCCeEEEEecCcccc
Confidence 6 59999999997643233456788999999999999999999999999987410 248999999997743
Q ss_pred cc------------------------------cCCCCCccchhhHHHHHHHHHHHHhhcc-CCCeEEEEecCcce-ecCC
Q psy11190 161 ED------------------------------NTQGGFHPYRCSKAALNAATRSLSIDLK-GDKIIATAMHPGWV-KTDM 208 (248)
Q Consensus 161 ~~------------------------------~~~~~~~~y~~sK~a~~~~~~~la~e~~-~~~i~v~~v~PG~v-~t~~ 208 (248)
.. .++.++..|++||+++..+++.|++++. ++||+|++|+||++ +|+|
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l 228 (314)
T TIGR01289 149 NTLAGNVPPKANLGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGL 228 (314)
T ss_pred ccCCCcCCCcccccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcc
Confidence 20 1123456799999999999999999985 46999999999999 6998
Q ss_pred CCCCC-----------------CCchhhHHHHHHHHhhhcccccccceeeeCCe
Q psy11190 209 GGSNA-----------------PLEVGAATAGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 209 ~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
.+... ..++++.++.++..+.+.....+|.|+.+++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~g~~~~~~~~ 282 (314)
T TIGR01289 229 FREHVPLFRTLFPPFQKYITKGYVSEEEAGERLAQVVSDPKLKKSGVYWSWGNR 282 (314)
T ss_pred cccccHHHHHHHHHHHHHHhccccchhhhhhhhHHhhcCcccCCCceeeecCCc
Confidence 65421 46889999999998887666678999998764
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-34 Score=239.56 Aligned_cols=216 Identities=23% Similarity=0.325 Sum_probs=188.6
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|+++||||++|||++++++|+++| ++|++++|+.++ ......+.++++|+++.++ ++.+++.+.+.++
T Consensus 7 k~~lItGas~gIG~~la~~l~~~g----~~v~~~~r~~~~-------~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~~~ 74 (252)
T PRK07856 7 RVVLVTGGTRGIGAGIARAFLAAG----ATVVVCGRRAPE-------TVDGRPAEFHAADVRDPDQ-VAALVDAIVERHG 74 (252)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC----CEEEEEeCChhh-------hhcCCceEEEEccCCCHHH-HHHHHHHHHHHcC
Confidence 789999999999999999999999 899999998754 1124467889999999999 9999999998877
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+||||||.... ..+.+.+.++|++.+++|+.+++.+++.+.+.|.++. ..++||++||..+..+
T Consensus 75 --~id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~----------~~g~ii~isS~~~~~~ 141 (252)
T PRK07856 75 --RLDVLVNNAGGSPY-ALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQP----------GGGSIVNIGSVSGRRP 141 (252)
T ss_pred --CCCEEEECCCCCCC-CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC----------CCcEEEEEcccccCCC
Confidence 59999999997654 6667788999999999999999999999999987642 3589999999998877
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC-----------------CCCchhhHHHHH
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN-----------------APLEVGAATAGI 224 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~-----------------~~~~~~~~~~~~ 224 (248)
. +++..|+++|+++++|++.++.|+.++ |++++|.||+++|++.... ....|+++++.+
T Consensus 142 ~---~~~~~Y~~sK~a~~~l~~~la~e~~~~-i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~va~~~ 217 (252)
T PRK07856 142 S---PGTAAYGAAKAGLLNLTRSLAVEWAPK-VRVNAVVVGLVRTEQSELHYGDAEGIAAVAATVPLGRLATPADIAWAC 217 (252)
T ss_pred C---CCCchhHHHHHHHHHHHHHHHHHhcCC-eEEEEEEeccccChHHhhhccCHHHHHHHhhcCCCCCCcCHHHHHHHH
Confidence 6 778999999999999999999999987 9999999999999975321 135799999999
Q ss_pred HHHhhhcccccccceeeeCCee
Q psy11190 225 IQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 225 ~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
+.+++......+|+.+..||..
T Consensus 218 ~~L~~~~~~~i~G~~i~vdgg~ 239 (252)
T PRK07856 218 LFLASDLASYVSGANLEVHGGG 239 (252)
T ss_pred HHHcCcccCCccCCEEEECCCc
Confidence 9999887788999999999853
|
|
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-34 Score=245.52 Aligned_cols=228 Identities=24% Similarity=0.275 Sum_probs=189.9
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCc-hhHHHHH-HHHhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNK-DKAVELL-ALAQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~-~~~~~~~-~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|+++||||++|||+++|++|+++| ++|++.+++. +..++.. ++...+.++.++++|++|.++ +.++++.+.+
T Consensus 13 k~~lVTGas~gIG~~ia~~L~~~G----a~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~-~~~~~~~~~~- 86 (306)
T PRK07792 13 KVAVVTGAAAGLGRAEALGLARLG----ATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRAT-ADELVATAVG- 86 (306)
T ss_pred CEEEEECCCChHHHHHHHHHHHCC----CEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHH-HHHHHHHHHH-
Confidence 799999999999999999999999 8999998754 3444543 333335578899999999999 9999999988
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
++ ++|+||||||...+ ..+.+.+.++|++.+++|+.+++++++.++++|.++.... .+...|+||++||..+.
T Consensus 87 ~g--~iD~li~nAG~~~~-~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~----~~~~~g~iv~isS~~~~ 159 (306)
T PRK07792 87 LG--GLDIVVNNAGITRD-RMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAA----GGPVYGRIVNTSSEAGL 159 (306)
T ss_pred hC--CCCEEEECCCCCCC-CCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhccc----CCCCCcEEEEECCcccc
Confidence 77 69999999998765 6677889999999999999999999999999997542100 00124799999999988
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC------------CCCchhhHHHHHHHH
Q psy11190 160 IEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN------------APLEVGAATAGIIQF 227 (248)
Q Consensus 160 ~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~------------~~~~~~~~~~~~~~~ 227 (248)
.+. +++..|+++|+++++|++.++.|+.++||+||+|+||. .|+|.... .+.+|++++..+.++
T Consensus 160 ~~~---~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~-~t~~~~~~~~~~~~~~~~~~~~~~pe~va~~v~~L 235 (306)
T PRK07792 160 VGP---VGQANYGAAKAGITALTLSAARALGRYGVRANAICPRA-RTAMTADVFGDAPDVEAGGIDPLSPEHVVPLVQFL 235 (306)
T ss_pred cCC---CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC-CCchhhhhccccchhhhhccCCCCHHHHHHHHHHH
Confidence 776 77889999999999999999999999999999999994 78775321 235789999999998
Q ss_pred hhhcccccccceeeeCCee
Q psy11190 228 IQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 228 ~~~~~~~~~g~~~~~~g~~ 246 (248)
+++.....+|+++..+|..
T Consensus 236 ~s~~~~~~tG~~~~v~gg~ 254 (306)
T PRK07792 236 ASPAAAEVNGQVFIVYGPM 254 (306)
T ss_pred cCccccCCCCCEEEEcCCe
Confidence 8887778999999988864
|
|
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-35 Score=238.11 Aligned_cols=216 Identities=17% Similarity=0.132 Sum_probs=175.6
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHH-HHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|+++||||++|||++++++|+++| ++|++.+|+.++++++.+ +...+.++..+++|+++.++ ++++++++.+.+
T Consensus 6 k~~lVtGas~GIG~aia~~la~~G----~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~~ 80 (227)
T PRK08862 6 SIILITSAGSVLGRTISCHFARLG----ATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQES-IRHLFDAIEQQF 80 (227)
T ss_pred eEEEEECCccHHHHHHHHHHHHCC----CEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHH-HHHHHHHHHHHh
Confidence 689999999999999999999999 899999999988877743 33334567889999999998 999999999887
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+. ++|++|||||......++.+.+.++|.+.+++|+.+++.+++.++|+|.+++ ..|+||++||..+.
T Consensus 81 g~-~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~----------~~g~Iv~isS~~~~- 148 (227)
T PRK08862 81 NR-APDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRN----------KKGVIVNVISHDDH- 148 (227)
T ss_pred CC-CCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC----------CCceEEEEecCCCC-
Confidence 61 4999999998655446788889999999999999999999999999998742 36899999997643
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC-CCc-hhhHHHHHHHHhhhcccccccc
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA-PLE-VGAATAGIIQFIQSLGEAHNGG 238 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~g~ 238 (248)
+++..|+++|+++.+|+++|+.|+.++|||||+|+||+++|+...... ... .+++++...++++ ....+|.
T Consensus 149 -----~~~~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~tg~ 221 (227)
T PRK08862 149 -----QDLTGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSANGELDAVHWAEIQDELIRNTEYIVA--NEYFSGR 221 (227)
T ss_pred -----CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCCCccCHHHHHHHHHHHHhheeEEEe--cccccce
Confidence 456789999999999999999999999999999999999998422100 001 2555555555554 3456666
Q ss_pred eee
Q psy11190 239 FFE 241 (248)
Q Consensus 239 ~~~ 241 (248)
.+.
T Consensus 222 ~~~ 224 (227)
T PRK08862 222 VVE 224 (227)
T ss_pred EEe
Confidence 553
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-34 Score=239.27 Aligned_cols=211 Identities=20% Similarity=0.234 Sum_probs=181.5
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
||+++||||++|||+++++.|+++| ++|++++|+.++++++.+......++.++++|+++.++ +.++++++.+.+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G----~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-i~~~~~~~~~~~ 76 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQG----ATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADA-LAAAAADFIAAH 76 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHH-HHHHHHHHHHhC
Confidence 4799999999999999999999999 89999999988777664433322378899999999999 999999998887
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+ ++|+||||||.........+.+.++++..+++|+.+++++++.++|.|.++ +.++||++||..+..
T Consensus 77 g--~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~-----------~~~~iv~isS~~~~~ 143 (257)
T PRK07024 77 G--LPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAA-----------RRGTLVGIASVAGVR 143 (257)
T ss_pred C--CCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhc-----------CCCEEEEEechhhcC
Confidence 7 599999999986542223336789999999999999999999999999875 568999999999987
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC-----CCchhhHHHHHHHHhhhcc
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA-----PLEVGAATAGIIQFIQSLG 232 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 232 (248)
+. +....|+++|++++.|+++++.|++++||+|++|+||+++|++..... ..+|+++++.++..+.+..
T Consensus 144 ~~---~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~a~~~~~~l~~~~ 217 (257)
T PRK07024 144 GL---PGAGAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTAHNPYPMPFLMDADRFAARAARAIARGR 217 (257)
T ss_pred CC---CCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchhhcCCCCCCCccCHHHHHHHHHHHHhCCC
Confidence 76 778899999999999999999999999999999999999999865322 2589999999999987643
|
|
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-34 Score=241.25 Aligned_cols=224 Identities=18% Similarity=0.224 Sum_probs=188.4
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchh-------HHHHH-HHHhhcCCceeEEeeccCCchhhhhHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDK-------AVELL-ALAQQHSNLHVIELDVTDFSKQQDVLF 73 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~-------~~~~~-~~~~~~~~~~~~~~D~~~~~~~v~~~~ 73 (248)
|+++||||++|||++++++|+++| +.|++++|+.+. ++++. ++...+.++.++++|+++.++ +..++
T Consensus 7 k~vlItGas~gIG~~ia~~l~~~G----~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~-i~~~~ 81 (273)
T PRK08278 7 KTLFITGASRGIGLAIALRAARDG----ANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQ-VAAAV 81 (273)
T ss_pred CEEEEECCCchHHHHHHHHHHHCC----CEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHH-HHHHH
Confidence 789999999999999999999999 899999998653 23332 233334578899999999999 99999
Q ss_pred HHhhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEe
Q psy11190 74 KDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNV 153 (248)
Q Consensus 74 ~~i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~v 153 (248)
+++.+.++ ++|+||||||...+ .++.+.+.+++++.+++|+.+++++++.++|.|.++ +.++|+++
T Consensus 82 ~~~~~~~g--~id~li~~ag~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~-----------~~g~iv~i 147 (273)
T PRK08278 82 AKAVERFG--GIDICVNNASAINL-TGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKS-----------ENPHILTL 147 (273)
T ss_pred HHHHHHhC--CCCEEEECCCCcCC-CCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhc-----------CCCEEEEE
Confidence 99988887 59999999998665 667778999999999999999999999999999875 46899999
Q ss_pred ecCCCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCc-ceecCCCCCC--------CCCchhhHHHHH
Q psy11190 154 SSIMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPG-WVKTDMGGSN--------APLEVGAATAGI 224 (248)
Q Consensus 154 ss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG-~v~t~~~~~~--------~~~~~~~~~~~~ 224 (248)
||..+..+. ..+++..|+++|++++.|+++++.|+.++||+||+|+|| +++|++.+.. ...+|+++++.+
T Consensus 148 ss~~~~~~~-~~~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~~~~~~~~~~~~~~~~~p~~va~~~ 226 (273)
T PRK08278 148 SPPLNLDPK-WFAPHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAAVRNLLGGDEAMRRSRTPEIMADAA 226 (273)
T ss_pred CCchhcccc-ccCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHHHHhcccccccccccCCHHHHHHHH
Confidence 998765432 115678999999999999999999999999999999999 6889754322 246899999999
Q ss_pred HHHhhhcccccccceeeeCCee
Q psy11190 225 IQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 225 ~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
+.+++......+|+++. ++++
T Consensus 227 ~~l~~~~~~~~~G~~~~-~~~~ 247 (273)
T PRK08278 227 YEILSRPAREFTGNFLI-DEEV 247 (273)
T ss_pred HHHhcCccccceeEEEe-ccch
Confidence 99999888889999884 6554
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-34 Score=238.16 Aligned_cols=223 Identities=23% Similarity=0.250 Sum_probs=192.4
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEE-eecCchhHHHHHH-HHhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFA-TCRNKDKAVELLA-LAQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~-~~r~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|+++||||++|||++++++|+++| ++|++ .+|+.++.+++.+ +...+.++.++++|++|+++ +..+++++.+.
T Consensus 5 ~~vlItGa~g~iG~~~a~~l~~~g----~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~ 79 (250)
T PRK08063 5 KVALVTGSSRGIGKAIALRLAEEG----YDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEK-IKEMFAQIDEE 79 (250)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC----CEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH-HHHHHHHHHHH
Confidence 689999999999999999999999 78776 5788777666643 33334578899999999999 99999999988
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
++ ++|+||||||.... .++.+.+.++++..+++|+.+++.+++++++.|.++ +.++||++||..+.
T Consensus 80 ~~--~id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----------~~g~iv~~sS~~~~ 145 (250)
T PRK08063 80 FG--RLDVFVNNAASGVL-RPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKV-----------GGGKIISLSSLGSI 145 (250)
T ss_pred cC--CCCEEEECCCCCCC-CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----------CCeEEEEEcchhhc
Confidence 87 59999999997654 677788999999999999999999999999999875 57899999998877
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC-----------------CCCchhhHHH
Q psy11190 160 IEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN-----------------APLEVGAATA 222 (248)
Q Consensus 160 ~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~-----------------~~~~~~~~~~ 222 (248)
.+. +++..|+++|++++.|+++++.++.+.||++++|.||+++|++.... ...+++++++
T Consensus 146 ~~~---~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~ 222 (250)
T PRK08063 146 RYL---ENYTTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNREELLEDARAKTPAGRMVEPEDVAN 222 (250)
T ss_pred cCC---CCccHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCchHHHHHHhcCCCCCCCcCHHHHHH
Confidence 665 67789999999999999999999999999999999999999874321 1457899999
Q ss_pred HHHHHhhhcccccccceeeeCCee
Q psy11190 223 GIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 223 ~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
.++.++.+.....+|+++.++|..
T Consensus 223 ~~~~~~~~~~~~~~g~~~~~~gg~ 246 (250)
T PRK08063 223 AVLFLCSPEADMIRGQTIIVDGGR 246 (250)
T ss_pred HHHHHcCchhcCccCCEEEECCCe
Confidence 999999887777899999998853
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-34 Score=238.34 Aligned_cols=222 Identities=20% Similarity=0.207 Sum_probs=193.5
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|+++||||++|||++++++|+++| ++|++++|+.+..+++.+.. ..++.++++|++|.++ ++.+++++.+.++
T Consensus 7 ~~vlItGas~~iG~~ia~~l~~~G----~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~-~~~~~~~~~~~~~ 79 (257)
T PRK07067 7 KVALLTGAASGIGEAVAERYLAEG----ARVVIADIKPARARLAALEI--GPAAIAVSLDVTRQDS-IDRIVAAAVERFG 79 (257)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcC----CEEEEEcCCHHHHHHHHHHh--CCceEEEEccCCCHHH-HHHHHHHHHHHcC
Confidence 689999999999999999999999 89999999988776664433 3468889999999999 9999999998877
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|++|||||.... .++.+.+.++++..+++|+.+++++++.+++.|.++. ..++||++||..+..+
T Consensus 80 --~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~----------~~~~iv~~sS~~~~~~ 146 (257)
T PRK07067 80 --GIDILFNNAALFDM-APILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQG----------RGGKIINMASQAGRRG 146 (257)
T ss_pred --CCCEEEECCCcCCC-CCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcC----------CCcEEEEeCCHHhCCC
Confidence 59999999998754 6777888999999999999999999999999987642 3579999999888777
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC--------------------------CCC
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN--------------------------APL 215 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~--------------------------~~~ 215 (248)
. ++...|+++|++++.|+++++.++.++||+|++|.||+++|++.+.. ...
T Consensus 147 ~---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (257)
T PRK07067 147 E---ALVSHYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGEAVPLGRMG 223 (257)
T ss_pred C---CCCchhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHHHHhhcCCCCCcc
Confidence 6 77889999999999999999999999999999999999999974321 023
Q ss_pred chhhHHHHHHHHhhhcccccccceeeeCCee
Q psy11190 216 EVGAATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
.|+++++.++.+++......+|+.+..+|..
T Consensus 224 ~~~dva~~~~~l~s~~~~~~~g~~~~v~gg~ 254 (257)
T PRK07067 224 VPDDLTGMALFLASADADYIVAQTYNVDGGN 254 (257)
T ss_pred CHHHHHHHHHHHhCcccccccCcEEeecCCE
Confidence 6899999999999988888899999998863
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-34 Score=237.97 Aligned_cols=223 Identities=21% Similarity=0.244 Sum_probs=193.2
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHH-hhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALA-QQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|+++||||++|||++++++|+++| ++|++++|+.++++++.+.. ....++.++.+|++|.++ ++.+++++.+.+
T Consensus 6 k~vlItGa~~~IG~~la~~l~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~~ 80 (258)
T PRK07890 6 KVVVVSGVGPGLGRTLAVRAARAG----ADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQ-CANLVALALERF 80 (258)
T ss_pred CEEEEECCCCcHHHHHHHHHHHcC----CEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHH-HHHHHHHHHHHc
Confidence 789999999999999999999999 89999999988777664433 334578899999999999 999999998888
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+ ++|+||||||...+..++.+.+.+++++.+++|+.+++.+++++++.|.+ ..++||++||..+..
T Consensus 81 g--~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~------------~~~~ii~~sS~~~~~ 146 (258)
T PRK07890 81 G--RVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAE------------SGGSIVMINSMVLRH 146 (258)
T ss_pred C--CccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHh------------CCCEEEEEechhhcc
Confidence 7 59999999998654466778889999999999999999999999999876 357999999998877
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC--------------------------CC
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN--------------------------AP 214 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~--------------------------~~ 214 (248)
+. +++..|+++|++++.+++.++.+++++||++++|+||+++|++.... ..
T Consensus 147 ~~---~~~~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (258)
T PRK07890 147 SQ---PKYGAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANSDLKRL 223 (258)
T ss_pred CC---CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhcCCcccc
Confidence 65 77889999999999999999999999999999999999999864310 12
Q ss_pred CchhhHHHHHHHHhhhcccccccceeeeCCee
Q psy11190 215 LEVGAATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
.+|++++..++.+++......+|+.+.++|..
T Consensus 224 ~~~~dva~a~~~l~~~~~~~~~G~~i~~~gg~ 255 (258)
T PRK07890 224 PTDDEVASAVLFLASDLARAITGQTLDVNCGE 255 (258)
T ss_pred CCHHHHHHHHHHHcCHhhhCccCcEEEeCCcc
Confidence 36799999999988877778999999888764
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-34 Score=237.46 Aligned_cols=218 Identities=21% Similarity=0.355 Sum_probs=187.9
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||++|||++++++|+++| ++|++++|+.+.. ...++.++++|++|.++ ++.+++++.+.++
T Consensus 10 k~vlItGas~gIG~~ia~~l~~~G----~~v~~~~r~~~~~--------~~~~~~~~~~D~~~~~~-~~~~~~~~~~~~~ 76 (260)
T PRK06523 10 KRALVTGGTKGIGAATVARLLEAG----ARVVTTARSRPDD--------LPEGVEFVAADLTTAEG-CAAVARAVLERLG 76 (260)
T ss_pred CEEEEECCCCchhHHHHHHHHHCC----CEEEEEeCChhhh--------cCCceeEEecCCCCHHH-HHHHHHHHHHHcC
Confidence 789999999999999999999999 8999999986531 13467889999999999 9999999988877
Q ss_pred CCCccEEEeccccCCc-cccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 82 DQGLNVLVNNAGIAAK-FTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
++|+||||||.... ...+.+.+.++|++.+++|+.+++.+++.++|.|+++ +.++||++||..+..
T Consensus 77 --~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----------~~g~ii~isS~~~~~ 143 (260)
T PRK06523 77 --GVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIAR-----------GSGVIIHVTSIQRRL 143 (260)
T ss_pred --CCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc-----------CCcEEEEEecccccC
Confidence 59999999997532 2456678899999999999999999999999999875 468999999998876
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC-----------------------------
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS----------------------------- 211 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~----------------------------- 211 (248)
+.+ .++..|+++|++++.|+++++.++.++||+|++|.||+++|++...
T Consensus 144 ~~~--~~~~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 221 (260)
T PRK06523 144 PLP--ESTTAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIPL 221 (260)
T ss_pred CCC--CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhccCcc
Confidence 641 3678999999999999999999999999999999999999997421
Q ss_pred CCCCchhhHHHHHHHHhhhcccccccceeeeCCeec
Q psy11190 212 NAPLEVGAATAGIIQFIQSLGEAHNGGFFEYTGKAI 247 (248)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~ 247 (248)
....+|+++++.+..++++.....+|+.+..+|...
T Consensus 222 ~~~~~~~~va~~~~~l~s~~~~~~~G~~~~vdgg~~ 257 (260)
T PRK06523 222 GRPAEPEEVAELIAFLASDRAASITGTEYVIDGGTV 257 (260)
T ss_pred CCCCCHHHHHHHHHHHhCcccccccCceEEecCCcc
Confidence 012468999999999998888899999999998754
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-34 Score=238.32 Aligned_cols=221 Identities=23% Similarity=0.245 Sum_probs=189.5
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||++|||++++++|+++| +.|++++|+.++.+...++...+.++.++++|+++.++ ++.+++++.+.++
T Consensus 8 ~~ilItGasggiG~~la~~l~~~G----~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~~~ 82 (258)
T PRK08628 8 KVVIVTGGASGIGAAISLRLAEEG----AIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQ-CRDAVEQTVAKFG 82 (258)
T ss_pred CEEEEeCCCChHHHHHHHHHHHcC----CcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHH-HHHHHHHHHHhcC
Confidence 689999999999999999999999 89999999987763224444445678999999999999 9999999988876
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+||||||.... ..+++.+ ++|+..+++|+.+++.+++.++|.+.+ ..++|+++||..+..+
T Consensus 83 --~id~vi~~ag~~~~-~~~~~~~-~~~~~~~~~n~~~~~~~~~~~~~~~~~------------~~~~iv~~ss~~~~~~ 146 (258)
T PRK08628 83 --RIDGLVNNAGVNDG-VGLEAGR-EAFVASLERNLIHYYVMAHYCLPHLKA------------SRGAIVNISSKTALTG 146 (258)
T ss_pred --CCCEEEECCcccCC-CcccCCH-HHHHHHHhhhhHHHHHHHHHHHHHhhc------------cCcEEEEECCHHhccC
Confidence 59999999997644 3444444 899999999999999999999999876 3589999999998877
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC----------------------CCCCchhh
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS----------------------NAPLEVGA 219 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~----------------------~~~~~~~~ 219 (248)
. +++..|+++|++++.|++.++.|+.++||+|+.|+||+++|++.+. ....+|++
T Consensus 147 ~---~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 223 (258)
T PRK08628 147 Q---GGTSGYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKIPLGHRMTTAEE 223 (258)
T ss_pred C---CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhcCCccccCCCHHH
Confidence 6 7788999999999999999999999999999999999999997421 12357899
Q ss_pred HHHHHHHHhhhcccccccceeeeCCee
Q psy11190 220 ATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 220 ~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
++..++.+++......+|+.+.++|..
T Consensus 224 va~~~~~l~~~~~~~~~g~~~~~~gg~ 250 (258)
T PRK08628 224 IADTAVFLLSERSSHTTGQWLFVDGGY 250 (258)
T ss_pred HHHHHHHHhChhhccccCceEEecCCc
Confidence 999999999988888999999998753
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-34 Score=234.97 Aligned_cols=223 Identities=22% Similarity=0.259 Sum_probs=190.2
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEe-ecCchhHHHH-HHHHhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFAT-CRNKDKAVEL-LALAQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~-~r~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|+++||||++|||++++++|+++| ++|++. +++....++. .++...+.++.++.+|++|.++ +.++++++.+.
T Consensus 4 k~~lVtG~s~giG~~~a~~l~~~G----~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~ 78 (246)
T PRK12938 4 RIAYVTGGMGGIGTSICQRLHKDG----FKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDS-TKAAFDKVKAE 78 (246)
T ss_pred CEEEEECCCChHHHHHHHHHHHcC----CEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHH-HHHHHHHHHHH
Confidence 789999999999999999999999 788775 4444444333 3333334567888999999999 99999999988
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
++ ++|+||||||.... .++.+.+.+++++.+++|+.+++.+++.+++.|.++ +.++|+++||..+.
T Consensus 79 ~~--~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----------~~~~iv~isS~~~~ 144 (246)
T PRK12938 79 VG--EIDVLVNNAGITRD-VVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVER-----------GWGRIINISSVNGQ 144 (246)
T ss_pred hC--CCCEEEECCCCCCC-CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----------CCeEEEEEechhcc
Confidence 87 69999999998765 567788999999999999999999999999999774 46899999999888
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC---------------CCCchhhHHHHH
Q psy11190 160 IEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN---------------APLEVGAATAGI 224 (248)
Q Consensus 160 ~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~---------------~~~~~~~~~~~~ 224 (248)
.+. +++..|+++|++++.|+++++.++.++||++++|+||+++|++.... ...++++++..+
T Consensus 145 ~~~---~~~~~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 221 (246)
T PRK12938 145 KGQ---FGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLEKIVATIPVRRLGSPDEIGSIV 221 (246)
T ss_pred CCC---CCChhHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhcChHHHHHHHhcCCccCCcCHHHHHHHH
Confidence 766 77889999999999999999999999999999999999999985431 135789999999
Q ss_pred HHHhhhcccccccceeeeCCee
Q psy11190 225 IQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 225 ~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
+.+++......+|+.+..+|..
T Consensus 222 ~~l~~~~~~~~~g~~~~~~~g~ 243 (246)
T PRK12938 222 AWLASEESGFSTGADFSLNGGL 243 (246)
T ss_pred HHHcCcccCCccCcEEEECCcc
Confidence 9988887788999999999874
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-34 Score=241.26 Aligned_cols=205 Identities=26% Similarity=0.395 Sum_probs=178.3
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
||+++||||+||||++++++|+++| ++|++++|+.+.++++.+ ..+.++++|++|.++ ++.+++++.+.+
T Consensus 4 ~k~vlItGasggiG~~la~~l~~~G----~~Vi~~~r~~~~~~~l~~-----~~~~~~~~Dl~d~~~-~~~~~~~~~~~~ 73 (277)
T PRK05993 4 KRSILITGCSSGIGAYCARALQSDG----WRVFATCRKEEDVAALEA-----EGLEAFQLDYAEPES-IAALVAQVLELS 73 (277)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHH-----CCceEEEccCCCHHH-HHHHHHHHHHHc
Confidence 3689999999999999999999999 899999999877665432 257789999999999 999999987765
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+ +++|+||||||...+ ..+.+.+.++++..+++|+.+++.+++.++|.|.++ +.++||++||..+..
T Consensus 74 ~-g~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~-----------~~g~iv~isS~~~~~ 140 (277)
T PRK05993 74 G-GRLDALFNNGAYGQP-GAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQ-----------GQGRIVQCSSILGLV 140 (277)
T ss_pred C-CCccEEEECCCcCCC-CCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhc-----------CCCEEEEECChhhcC
Confidence 3 259999999998765 677888999999999999999999999999999875 568999999999887
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC----------------------------
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN---------------------------- 212 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~---------------------------- 212 (248)
+. ++...|+++|+++++|+++|+.|+.++||+|++|+||+++|++....
T Consensus 141 ~~---~~~~~Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (277)
T PRK05993 141 PM---KYRGAYNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETRFRANALAAFKRWIDIENSVHRAAYQQQMARLEG 217 (277)
T ss_pred CC---CccchHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCchhhHHHHHHhhhhccccchhHHHHHHHHHHHHh
Confidence 66 77889999999999999999999999999999999999999976421
Q ss_pred ------CCCchhhHHHHHHHHhhhc
Q psy11190 213 ------APLEVGAATAGIIQFIQSL 231 (248)
Q Consensus 213 ------~~~~~~~~~~~~~~~~~~~ 231 (248)
...+|+++++.++..+.+.
T Consensus 218 ~~~~~~~~~~~~~va~~i~~a~~~~ 242 (277)
T PRK05993 218 GGSKSRFKLGPEAVYAVLLHALTAP 242 (277)
T ss_pred hhhccccCCCHHHHHHHHHHHHcCC
Confidence 1357899999999888664
|
|
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-34 Score=239.29 Aligned_cols=214 Identities=15% Similarity=0.192 Sum_probs=177.2
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHh-hcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQ-QHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|+++|||+ ||||+++|++|+ +| ++|++++|+.++++++.+... .+.++.++++|++|.++ +..+++++. .+
T Consensus 3 k~~lItGa-~gIG~~la~~l~-~G----~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~-i~~~~~~~~-~~ 74 (275)
T PRK06940 3 EVVVVIGA-GGIGQAIARRVG-AG----KKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRES-VKALAATAQ-TL 74 (275)
T ss_pred CEEEEECC-ChHHHHHHHHHh-CC----CEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHH-HHHHHHHHH-hc
Confidence 68899998 699999999996 78 899999999877766643333 24478899999999999 999998884 45
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+ ++|+||||||... +.+++++.+++|+.+++++++.++|.|.+ .+++++++|.++..
T Consensus 75 g--~id~li~nAG~~~--------~~~~~~~~~~vN~~g~~~l~~~~~~~m~~-------------~g~iv~isS~~~~~ 131 (275)
T PRK06940 75 G--PVTGLVHTAGVSP--------SQASPEAILKVDLYGTALVLEEFGKVIAP-------------GGAGVVIASQSGHR 131 (275)
T ss_pred C--CCCEEEECCCcCC--------chhhHHHHHHHhhHHHHHHHHHHHHHHhh-------------CCCEEEEEeccccc
Confidence 5 6999999999742 23678999999999999999999999964 46789999988765
Q ss_pred ccc------------------------C---CCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC-
Q psy11190 161 EDN------------------------T---QGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN- 212 (248)
Q Consensus 161 ~~~------------------------~---~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~- 212 (248)
+.. + ..++..|++||+++..|+++++.++.++|||||+|+||+++|++....
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~ 211 (275)
T PRK06940 132 LPALTAEQERALATTPTEELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDEL 211 (275)
T ss_pred CcccchhhhccccccccccccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhh
Confidence 420 0 024678999999999999999999999999999999999999985321
Q ss_pred ------------------CCCchhhHHHHHHHHhhhcccccccceeeeCCee
Q psy11190 213 ------------------APLEVGAATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 213 ------------------~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
...+|+++++.+++++++.....+|+.+..||..
T Consensus 212 ~~~~~~~~~~~~~~~p~~r~~~peeia~~~~fL~s~~~~~itG~~i~vdgg~ 263 (275)
T PRK06940 212 NGPRGDGYRNMFAKSPAGRPGTPDEIAALAEFLMGPRGSFITGSDFLVDGGA 263 (275)
T ss_pred cCCchHHHHHHhhhCCcccCCCHHHHHHHHHHHcCcccCcccCceEEEcCCe
Confidence 1257999999999999888889999999999863
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-34 Score=238.61 Aligned_cols=206 Identities=26% Similarity=0.305 Sum_probs=183.4
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|+++||||+||||++++++|+++| ++|++.+|+.++++++.+... ++.++++|++|.++ ++.+++.+.+.++
T Consensus 6 ~~ilVtGasggiG~~la~~l~~~G----~~v~~~~r~~~~~~~~~~~~~---~~~~~~~D~~~~~~-~~~~~~~~~~~~~ 77 (273)
T PRK07825 6 KVVAITGGARGIGLATARALAALG----ARVAIGDLDEALAKETAAELG---LVVGGPLDVTDPAS-FAAFLDAVEADLG 77 (273)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHHhc---cceEEEccCCCHHH-HHHHHHHHHHHcC
Confidence 689999999999999999999999 899999999887766543332 57889999999999 9999999998876
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|++|||||.... ..+.+.+.+++++.+++|+.+++.+++.++|.|.++ +.++||++||..+..+
T Consensus 78 --~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-----------~~g~iv~isS~~~~~~ 143 (273)
T PRK07825 78 --PIDVLVNNAGVMPV-GPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPR-----------GRGHVVNVASLAGKIP 143 (273)
T ss_pred --CCCEEEECCCcCCC-CccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----------CCCEEEEEcCccccCC
Confidence 59999999998765 677778899999999999999999999999999875 5789999999999887
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC------CCCchhhHHHHHHHHhhhcc
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN------APLEVGAATAGIIQFIQSLG 232 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~------~~~~~~~~~~~~~~~~~~~~ 232 (248)
. +++..|+++|+++.+|+++++.++.++||++++|+||+++|++.... ...+++++++.++..+.+..
T Consensus 144 ~---~~~~~Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~va~~~~~~l~~~~ 217 (273)
T PRK07825 144 V---PGMATYCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELIAGTGGAKGFKNVEPEDVAAAIVGTVAKPR 217 (273)
T ss_pred C---CCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhcccccccCCCCCCHHHHHHHHHHHHhCCC
Confidence 6 78899999999999999999999999999999999999999986543 35789999999999987643
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=235.35 Aligned_cols=221 Identities=26% Similarity=0.351 Sum_probs=188.3
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
+|+++||||+++||+++|++|+++| ++|++++|+.++..++.+.. ..++.++++|+++.++ ++.+++++.+.+
T Consensus 10 ~k~vlItG~sg~IG~~~a~~l~~~g----~~v~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~-~~~~~~~~~~~~ 82 (255)
T PRK05717 10 GRVALVTGAARGIGLGIAAWLIAEG----WQVVLADLDRERGSKVAKAL--GENAWFIAMDVADEAQ-VAAGVAEVLGQF 82 (255)
T ss_pred CCEEEEeCCcchHHHHHHHHHHHcC----CEEEEEcCCHHHHHHHHHHc--CCceEEEEccCCCHHH-HHHHHHHHHHHh
Confidence 3799999999999999999999999 89999999877665543322 3468899999999999 999999998888
Q ss_pred cCCCccEEEeccccCCcc-ccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 81 KDQGLNVLVNNAGIAAKF-TRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
+ ++|+||||||...+. .++.+.+.++|++.+++|+.+++++++.++|.|.+ ..++||++||..+.
T Consensus 83 g--~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~------------~~g~ii~~sS~~~~ 148 (255)
T PRK05717 83 G--RLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRA------------HNGAIVNLASTRAR 148 (255)
T ss_pred C--CCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH------------cCcEEEEEcchhhc
Confidence 7 599999999987542 46677889999999999999999999999999976 35899999999988
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC----------------CCCchhhHHHH
Q psy11190 160 IEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN----------------APLEVGAATAG 223 (248)
Q Consensus 160 ~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~----------------~~~~~~~~~~~ 223 (248)
.+. +.+..|+++|++++.|++.++.++.+ +|+|++|.||+++|++.... ...+|++++..
T Consensus 149 ~~~---~~~~~Y~~sKaa~~~~~~~la~~~~~-~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~ 224 (255)
T PRK05717 149 QSE---PDTEAYAASKGGLLALTHALAISLGP-EIRVNAVSPGWIDARDPSQRRAEPLSEADHAQHPAGRVGTVEDVAAM 224 (255)
T ss_pred CCC---CCCcchHHHHHHHHHHHHHHHHHhcC-CCEEEEEecccCcCCccccccchHHHHHHhhcCCCCCCcCHHHHHHH
Confidence 776 67889999999999999999999976 49999999999999874321 13468899999
Q ss_pred HHHHhhhcccccccceeeeCCee
Q psy11190 224 IIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 224 ~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
++.+++......+|+.+..+|..
T Consensus 225 ~~~l~~~~~~~~~g~~~~~~gg~ 247 (255)
T PRK05717 225 VAWLLSRQAGFVTGQEFVVDGGM 247 (255)
T ss_pred HHHHcCchhcCccCcEEEECCCc
Confidence 99888776677889988888853
|
|
| >KOG1207|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-35 Score=220.17 Aligned_cols=217 Identities=27% Similarity=0.360 Sum_probs=186.8
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
+++++||+.-|||+++++.|++.| ++|+.+.|+++.+..+.... .+.+..+..|+++++. +. +.+...+
T Consensus 8 ~~vlvTgagaGIG~~~v~~La~aG----A~ViAvaR~~a~L~sLV~e~--p~~I~Pi~~Dls~wea-~~---~~l~~v~- 76 (245)
T KOG1207|consen 8 VIVLVTGAGAGIGKEIVLSLAKAG----AQVIAVARNEANLLSLVKET--PSLIIPIVGDLSAWEA-LF---KLLVPVF- 76 (245)
T ss_pred eEEEeecccccccHHHHHHHHhcC----CEEEEEecCHHHHHHHHhhC--CcceeeeEecccHHHH-HH---HhhcccC-
Confidence 578999999999999999999999 99999999998877664332 2348899999998655 33 3344333
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
.+|.||||||+... .+|.+++.+.+++.|++|+.+.++++|...+-+..+. .+|.|+++||.++.++
T Consensus 77 --pidgLVNNAgvA~~-~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~----------~~GaIVNvSSqas~R~ 143 (245)
T KOG1207|consen 77 --PIDGLVNNAGVATN-HPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQ----------IKGAIVNVSSQASIRP 143 (245)
T ss_pred --chhhhhccchhhhc-chHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhcc----------CCceEEEecchhcccc
Confidence 49999999999875 8999999999999999999999999999777766653 5788999999999988
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC-----------------CCchhhHHHHH
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA-----------------PLEVGAATAGI 224 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~-----------------~~~~~~~~~~~ 224 (248)
. .+...||++|+|+++++++|+.|+++++||||+|+|-.++|.|.+..- --+.+|+..++
T Consensus 144 ~---~nHtvYcatKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWSDP~K~k~mL~riPl~rFaEV~eVVnA~ 220 (245)
T KOG1207|consen 144 L---DNHTVYCATKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWSDPDKKKKMLDRIPLKRFAEVDEVVNAV 220 (245)
T ss_pred c---CCceEEeecHHHHHHHHHHHHHhhCcceeEeeccCCeEEEecccccccCCchhccchhhhCchhhhhHHHHHHhhh
Confidence 8 889999999999999999999999999999999999999999976531 13589999999
Q ss_pred HHHhhhcccccccceeeeCCe
Q psy11190 225 IQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 225 ~~~~~~~~~~~~g~~~~~~g~ 245 (248)
.+++++.+.-.+|..+-.+|.
T Consensus 221 lfLLSd~ssmttGstlpveGG 241 (245)
T KOG1207|consen 221 LFLLSDNSSMTTGSTLPVEGG 241 (245)
T ss_pred eeeeecCcCcccCceeeecCC
Confidence 999999888889998888875
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-33 Score=233.86 Aligned_cols=223 Identities=26% Similarity=0.346 Sum_probs=195.6
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHH-HHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|+++||||+|+||++++++|+++| ++|++++|+.++++++.+ +.....++.++++|++|.++ ++++++++.+.+
T Consensus 8 ~~vlItGa~g~iG~~la~~l~~~G----~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-~~~~~~~~~~~~ 82 (250)
T PRK12939 8 KRALVTGAARGLGAAFAEALAEAG----ATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPAS-VQRFFDAAAAAL 82 (250)
T ss_pred CEEEEeCCCChHHHHHHHHHHHcC----CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHH-HHHHHHHHHHHc
Confidence 789999999999999999999999 899999999887776643 33334578899999999999 999999999887
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+ ++|+||||+|...+ ..+.+.+.+++++.++.|+.+++++++.+++.+.++ +.+++|++||..+..
T Consensus 83 ~--~id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----------~~g~iv~isS~~~~~ 148 (250)
T PRK12939 83 G--GLDGLVNNAGITNS-KSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDS-----------GRGRIVNLASDTALW 148 (250)
T ss_pred C--CCCEEEECCCCCCC-CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----------CCeEEEEECchhhcc
Confidence 6 59999999998765 667778899999999999999999999999998875 578999999988877
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC----------------CCchhhHHHHH
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA----------------PLEVGAATAGI 224 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~----------------~~~~~~~~~~~ 224 (248)
+. ++...|+++|++++.+++.++.++.+++|+++.|.||+++|++.+... ..+++++++.+
T Consensus 149 ~~---~~~~~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~ 225 (250)
T PRK12939 149 GA---PKLGAYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPADERHAYYLKGRALERLQVPDDVAGAV 225 (250)
T ss_pred CC---CCcchHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCChHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence 66 677899999999999999999999999999999999999999864321 25789999999
Q ss_pred HHHhhhcccccccceeeeCCee
Q psy11190 225 IQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 225 ~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
+.++....+..+|+++.++|..
T Consensus 226 ~~l~~~~~~~~~G~~i~~~gg~ 247 (250)
T PRK12939 226 LFLLSDAARFVTGQLLPVNGGF 247 (250)
T ss_pred HHHhCccccCccCcEEEECCCc
Confidence 9999877778899999999853
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-33 Score=238.78 Aligned_cols=222 Identities=26% Similarity=0.294 Sum_probs=191.3
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchh-HHHHHHHHh-hcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDK-AVELLALAQ-QHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~-~~~~~~~~~-~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|++|||||++|||.+++++|+++| ++|++++|+.+. .+.+.+... .+.++.++.+|+++.++ +..+++++.+.
T Consensus 47 k~iLItGasggIG~~la~~l~~~G----~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-~~~~~~~i~~~ 121 (290)
T PRK06701 47 KVALITGGDSGIGRAVAVLFAKEG----ADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAF-CKDAVEETVRE 121 (290)
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC----CEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHH-HHHHHHHHHHH
Confidence 689999999999999999999999 899999998643 344433332 24468899999999999 99999999888
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
++ ++|+||||||.......+.+.+.++|++.+++|+.+++++++++++.|+. .++||++||..+.
T Consensus 122 ~~--~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~-------------~g~iV~isS~~~~ 186 (290)
T PRK06701 122 LG--RLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQ-------------GSAIINTGSITGY 186 (290)
T ss_pred cC--CCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhh-------------CCeEEEEeccccc
Confidence 76 59999999998654456778899999999999999999999999999853 4789999999988
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC----------------CCCchhhHHHH
Q psy11190 160 IEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN----------------APLEVGAATAG 223 (248)
Q Consensus 160 ~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~----------------~~~~~~~~~~~ 223 (248)
.+. +.+..|+++|++++.|+++++.++.++||+|++|+||+++|++.... ....++++++.
T Consensus 187 ~~~---~~~~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~ 263 (290)
T PRK06701 187 EGN---ETLIDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDFDEEKVSQFGSNTPMQRPGQPEELAPA 263 (290)
T ss_pred CCC---CCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcccccccCHHHHHHHHhcCCcCCCcCHHHHHHH
Confidence 776 67789999999999999999999999999999999999999976431 13568999999
Q ss_pred HHHHhhhcccccccceeeeCCee
Q psy11190 224 IIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 224 ~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
++.++++.....+|..+.++|..
T Consensus 264 ~~~ll~~~~~~~~G~~i~idgg~ 286 (290)
T PRK06701 264 YVFLASPDSSYITGQMLHVNGGV 286 (290)
T ss_pred HHHHcCcccCCccCcEEEeCCCc
Confidence 99999988888899999999864
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-33 Score=233.99 Aligned_cols=223 Identities=24% Similarity=0.295 Sum_probs=194.7
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|+++||||+|+||++++++|+++| ++|++++|+.++.+++........++.++++|++|.++ ++.+++++.+.++
T Consensus 6 ~~vlItGasg~iG~~l~~~l~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~~~ 80 (251)
T PRK07231 6 KVAIVTGASSGIGEGIARRFAAEG----ARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEAD-VEAAVAAALERFG 80 (251)
T ss_pred cEEEEECCCChHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHH-HHHHHHHHHHHhC
Confidence 689999999999999999999999 89999999988777664433334568899999999999 9999999988776
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+||||+|......++.+.+.+++++.+++|+.+++.+++.+++.|.++ ..++||++||..+..+
T Consensus 81 --~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----------~~~~iv~~sS~~~~~~ 147 (251)
T PRK07231 81 --SVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGE-----------GGGAIVNVASTAGLRP 147 (251)
T ss_pred --CCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-----------CCcEEEEEcChhhcCC
Confidence 599999999986554567788999999999999999999999999999875 5689999999988876
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC-------------------CCchhhHHH
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA-------------------PLEVGAATA 222 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~-------------------~~~~~~~~~ 222 (248)
. ++...|+.+|++++.|++.++.+++++||++++++||+++|++..... ...|+++++
T Consensus 148 ~---~~~~~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~ 224 (251)
T PRK07231 148 R---PGLGWYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLATIPLGRLGTPEDIAN 224 (251)
T ss_pred C---CCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHHHHHhcCCCCCCCcCHHHHHH
Confidence 6 778899999999999999999999988999999999999999754321 246899999
Q ss_pred HHHHHhhhcccccccceeeeCCe
Q psy11190 223 GIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 223 ~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
.++.++.......+|.++.++|.
T Consensus 225 ~~~~l~~~~~~~~~g~~~~~~gg 247 (251)
T PRK07231 225 AALFLASDEASWITGVTLVVDGG 247 (251)
T ss_pred HHHHHhCccccCCCCCeEEECCC
Confidence 99999987777889999999884
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-33 Score=230.73 Aligned_cols=219 Identities=21% Similarity=0.327 Sum_probs=186.8
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhh--cCCceeEEeeccCC--chhhhhHHHHhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQ--HSNLHVIELDVTDF--SKQQDVLFKDIS 77 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~--~~~v~~~~~~i~ 77 (248)
|+++||||++|||++++++|+++| ++|++++|+.++++++.+.... ...+.++++|+++. ++ +..+++++.
T Consensus 7 k~vlItG~sggiG~~la~~l~~~g----~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~-~~~~~~~i~ 81 (239)
T PRK08703 7 KTILVTGASQGLGEQVAKAYAAAG----ATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKE-FEQFAATIA 81 (239)
T ss_pred CEEEEECCCCcHHHHHHHHHHHcC----CEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHH-HHHHHHHHH
Confidence 789999999999999999999999 8999999999887776433322 23577889999863 45 788888888
Q ss_pred hhh-cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecC
Q psy11190 78 DVV-KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSI 156 (248)
Q Consensus 78 ~~~-~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~ 156 (248)
+.+ + ++|++|||||......++.+.+.+++++.+++|+.+++++++.++|.|.+. +.+++++++|.
T Consensus 82 ~~~~~--~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-----------~~~~iv~~ss~ 148 (239)
T PRK08703 82 EATQG--KLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQS-----------PDASVIFVGES 148 (239)
T ss_pred HHhCC--CCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhC-----------CCCEEEEEecc
Confidence 877 4 599999999976544567888999999999999999999999999999874 46899999998
Q ss_pred CCcccccCCCCCccchhhHHHHHHHHHHHHhhccCC-CeEEEEecCcceecCCCCCC-------CCCchhhHHHHHHHHh
Q psy11190 157 MGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGD-KIIATAMHPGWVKTDMGGSN-------APLEVGAATAGIIQFI 228 (248)
Q Consensus 157 ~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~-~i~v~~v~PG~v~t~~~~~~-------~~~~~~~~~~~~~~~~ 228 (248)
.+..+. +++..|+++|++++.|++.++.|+.++ +|+|++|.||+++|++.... ...++++++..+++++
T Consensus 149 ~~~~~~---~~~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (239)
T PRK08703 149 HGETPK---AYWGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKSHPGEAKSERKSYGDVLPAFVWWA 225 (239)
T ss_pred ccccCC---CCccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccccccCCCCCccccCCHHHHHHHHHHHh
Confidence 887665 777899999999999999999999876 69999999999999985432 1356889999999999
Q ss_pred hhcccccccceee
Q psy11190 229 QSLGEAHNGGFFE 241 (248)
Q Consensus 229 ~~~~~~~~g~~~~ 241 (248)
++.+...+|+.+.
T Consensus 226 ~~~~~~~~g~~~~ 238 (239)
T PRK08703 226 SAESKGRSGEIVY 238 (239)
T ss_pred CccccCcCCeEee
Confidence 9888899998874
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-33 Score=235.47 Aligned_cols=223 Identities=25% Similarity=0.339 Sum_probs=193.6
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHH-hhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALA-QQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|++|||||++|||++++++|+++| ++|++++|+.++++++.+.. ..+.++.++.+|+++.++ +.++++++.+.+
T Consensus 11 ~~vlItGasggIG~~~a~~l~~~G----~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~~ 85 (263)
T PRK07814 11 QVAVVTGAGRGLGAAIALAFAEAG----ADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEA-TAGLAGQAVEAF 85 (263)
T ss_pred CEEEEECCCChHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHH-HHHHHHHHHHHc
Confidence 789999999999999999999999 89999999988777764333 334578889999999999 999999998888
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+ ++|+||||||...+ ..+.+.+.+++++.+++|+.+++.+++.+.+.|.+.. +.++++++||..+..
T Consensus 86 ~--~id~vi~~Ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~----------~~g~iv~~sS~~~~~ 152 (263)
T PRK07814 86 G--RLDIVVNNVGGTMP-NPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHS----------GGGSVINISSTMGRL 152 (263)
T ss_pred C--CCCEEEECCCCCCC-CChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhc----------CCeEEEEEccccccC
Confidence 7 59999999998655 6677788999999999999999999999999997632 468999999999887
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC-----------------CCCchhhHHHH
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN-----------------APLEVGAATAG 223 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~-----------------~~~~~~~~~~~ 223 (248)
+. +++..|+++|++++.|+++++.++.+ +|++++|+||+++|++.... ...+++++++.
T Consensus 153 ~~---~~~~~Y~~sK~a~~~~~~~~~~e~~~-~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~ 228 (263)
T PRK07814 153 AG---RGFAAYGTAKAALAHYTRLAALDLCP-RIRVNAIAPGSILTSALEVVAANDELRAPMEKATPLRRLGDPEDIAAA 228 (263)
T ss_pred CC---CCCchhHHHHHHHHHHHHHHHHHHCC-CceEEEEEeCCCcCchhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence 76 77889999999999999999999987 69999999999999874321 12478999999
Q ss_pred HHHHhhhcccccccceeeeCCee
Q psy11190 224 IIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 224 ~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
++.++++.....+|+.+.++|..
T Consensus 229 ~~~l~~~~~~~~~g~~~~~~~~~ 251 (263)
T PRK07814 229 AVYLASPAGSYLTGKTLEVDGGL 251 (263)
T ss_pred HHHHcCccccCcCCCEEEECCCc
Confidence 99999887788999999998863
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-33 Score=233.30 Aligned_cols=223 Identities=20% Similarity=0.260 Sum_probs=186.7
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeec-CchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCR-NKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|+++||||++|||+++++.|+++| ++|++..+ +.+..+.+.... ..++.++++|+++.++ ++.+++++.+.+
T Consensus 6 k~ilItGas~gIG~~la~~l~~~G----~~vv~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~-~~~~~~~~~~~~ 78 (253)
T PRK08642 6 QTVLVTGGSRGLGAAIARAFAREG----ARVVVNYHQSEDAAEALADEL--GDRAIALQADVTDREQ-VQAMFATATEHF 78 (253)
T ss_pred CEEEEeCCCCcHHHHHHHHHHHCC----CeEEEEcCCCHHHHHHHHHHh--CCceEEEEcCCCCHHH-HHHHHHHHHHHh
Confidence 689999999999999999999999 88888655 444444443322 2478889999999998 999999998887
Q ss_pred cCCCccEEEeccccCCc-----cccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeec
Q psy11190 81 KDQGLNVLVNNAGIAAK-----FTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSS 155 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~-----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss 155 (248)
+. ++|++|||||.... ..++.+.+.+++++.+++|+.+++++++.+++.|.++ ..++|++++|
T Consensus 79 g~-~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----------~~g~iv~iss 146 (253)
T PRK08642 79 GK-PITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQ-----------GFGRIINIGT 146 (253)
T ss_pred CC-CCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhc-----------CCeEEEEECC
Confidence 62 49999999986421 1346678899999999999999999999999999764 4689999999
Q ss_pred CCCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC----------------CCCchhh
Q psy11190 156 IMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN----------------APLEVGA 219 (248)
Q Consensus 156 ~~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~----------------~~~~~~~ 219 (248)
..+..+. .++..|+++|+++++|++++++++.++||+||+|.||+++|++.... ...+|++
T Consensus 147 ~~~~~~~---~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (253)
T PRK08642 147 NLFQNPV---VPYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAATPDEVFDLIAATTPLRKVTTPQE 223 (253)
T ss_pred ccccCCC---CCccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccCCHHHHHHHHhcCCcCCCCCHHH
Confidence 8765544 56789999999999999999999999999999999999999854321 1457999
Q ss_pred HHHHHHHHhhhcccccccceeeeCCee
Q psy11190 220 ATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 220 ~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
++..+..++++.+...+|+.+..||..
T Consensus 224 va~~~~~l~~~~~~~~~G~~~~vdgg~ 250 (253)
T PRK08642 224 FADAVLFFASPWARAVTGQNLVVDGGL 250 (253)
T ss_pred HHHHHHHHcCchhcCccCCEEEeCCCe
Confidence 999999999988889999999999864
|
|
| >PRK09009 C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=232.62 Aligned_cols=220 Identities=30% Similarity=0.432 Sum_probs=179.6
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|+++||||++|||++++++|+++|. +..|++..|+.... ....++.++++|+++.++ ++++. +.++
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~--~~~v~~~~~~~~~~-------~~~~~~~~~~~Dls~~~~-~~~~~----~~~~ 66 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYP--DATVHATYRHHKPD-------FQHDNVQWHALDVTDEAE-IKQLS----EQFT 66 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCC--CCEEEEEccCCccc-------cccCceEEEEecCCCHHH-HHHHH----HhcC
Confidence 3799999999999999999999862 26677667654321 123578889999999988 76643 3344
Q ss_pred CCCccEEEeccccCCc-----cccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecC
Q psy11190 82 DQGLNVLVNNAGIAAK-----FTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSI 156 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~-----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~ 156 (248)
++|+||||||.... ...+.+.+.+.+++.+.+|+.+++.+++.++|.|.++ +.++++++||.
T Consensus 67 --~id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~-----------~~~~i~~iss~ 133 (235)
T PRK09009 67 --QLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQS-----------ESAKFAVISAK 133 (235)
T ss_pred --CCCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhcccc-----------CCceEEEEeec
Confidence 59999999998742 1345677888999999999999999999999999764 45789999987
Q ss_pred CCcccccCCCCCccchhhHHHHHHHHHHHHhhccC--CCeEEEEecCcceecCCCCCCC-------CCchhhHHHHHHHH
Q psy11190 157 MGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKG--DKIIATAMHPGWVKTDMGGSNA-------PLEVGAATAGIIQF 227 (248)
Q Consensus 157 ~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~--~~i~v~~v~PG~v~t~~~~~~~-------~~~~~~~~~~~~~~ 227 (248)
.+.....+.+++..|+++|+++++|+++|+.|+.+ ++|+|++|+||+++|+|..... ..+|+++++.++.+
T Consensus 134 ~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~a~~~~~l 213 (235)
T PRK09009 134 VGSISDNRLGGWYSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPFQQNVPKGKLFTPEYVAQCLLGI 213 (235)
T ss_pred ccccccCCCCCcchhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcchhhccccCCCCCHHHHHHHHHHH
Confidence 66544333466789999999999999999999986 6999999999999999975432 46899999999999
Q ss_pred hhhcccccccceeeeCCeecC
Q psy11190 228 IQSLGEAHNGGFFEYTGKAIK 248 (248)
Q Consensus 228 ~~~~~~~~~g~~~~~~g~~~~ 248 (248)
+.+.....+|+++.++|..+|
T Consensus 214 ~~~~~~~~~g~~~~~~g~~~~ 234 (235)
T PRK09009 214 IANATPAQSGSFLAYDGETLP 234 (235)
T ss_pred HHcCChhhCCcEEeeCCcCCC
Confidence 999888889999999998865
|
|
| >KOG4169|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-35 Score=228.81 Aligned_cols=215 Identities=25% Similarity=0.345 Sum_probs=187.5
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcC--CceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHS--NLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|.+++||+.||||++++++|+++| ..+.++..+.|..+...++.+..+ ++.|+++|+++..+ ++++++++...
T Consensus 6 Kna~vtggagGIGl~~sk~Ll~kg----ik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~-~~~~f~ki~~~ 80 (261)
T KOG4169|consen 6 KNALVTGGAGGIGLATSKALLEKG----IKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGD-LEAAFDKILAT 80 (261)
T ss_pred ceEEEecCCchhhHHHHHHHHHcC----chheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHH-HHHHHHHHHHH
Confidence 789999999999999999999999 777777777788777777666544 68899999999888 99999999999
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
+| .+|++||+||+.. ..+|++++.+|+.|.++-+...+|+|.+++.+ ..|-|||+||.+|.
T Consensus 81 fg--~iDIlINgAGi~~---------dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG--------~GGiIvNmsSv~GL 141 (261)
T KOG4169|consen 81 FG--TIDILINGAGILD---------DKDWERTINVNLTGVINGTQLALPYMDKKQGG--------KGGIIVNMSSVAGL 141 (261)
T ss_pred hC--ceEEEEccccccc---------chhHHHhhccchhhhhhhhhhhhhhhhhhcCC--------CCcEEEEecccccc
Confidence 98 5999999999864 46799999999999999999999999987532 57899999999999
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHhhc--cCCCeEEEEecCcceecCCCCCC--------------------CCCch
Q psy11190 160 IEDNTQGGFHPYRCSKAALNAATRSLSIDL--KGDKIIATAMHPGWVKTDMGGSN--------------------APLEV 217 (248)
Q Consensus 160 ~~~~~~~~~~~y~~sK~a~~~~~~~la~e~--~~~~i~v~~v~PG~v~t~~~~~~--------------------~~~~~ 217 (248)
.|. +..+.|++||+++.+|+++|+... .+.||+++.|+||+++|.+.... +..+|
T Consensus 142 ~P~---p~~pVY~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l~~~~~~~~~~~e~~~~~~~~l~~~~~q~~ 218 (261)
T KOG4169|consen 142 DPM---PVFPVYAASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDLAENIDASGGYLEYSDSIKEALERAPKQSP 218 (261)
T ss_pred Ccc---ccchhhhhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHHHHHHHHhcCCcccccHHHHHHHHHcccCCH
Confidence 887 889999999999999999998665 36699999999999999875432 14679
Q ss_pred hhHHHHHHHHhhhcccccccceeeeCCee
Q psy11190 218 GAATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
+.++..++..++. ..||+.|-.+.+.
T Consensus 219 ~~~a~~~v~aiE~---~~NGaiw~v~~g~ 244 (261)
T KOG4169|consen 219 ACCAINIVNAIEY---PKNGAIWKVDSGS 244 (261)
T ss_pred HHHHHHHHHHHhh---ccCCcEEEEecCc
Confidence 9999999999887 7799998877654
|
|
| >COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-33 Score=217.78 Aligned_cols=181 Identities=30% Similarity=0.380 Sum_probs=164.5
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhcC
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVKD 82 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~~ 82 (248)
|+|||||++|||+++|++|.+.| ..|++++|+.+++++.... .+.++...||+.|.++ .+++++++.+.++
T Consensus 7 TiLITGG~sGIGl~lak~f~elg----N~VIi~gR~e~~L~e~~~~---~p~~~t~v~Dv~d~~~-~~~lvewLkk~~P- 77 (245)
T COG3967 7 TILITGGASGIGLALAKRFLELG----NTVIICGRNEERLAEAKAE---NPEIHTEVCDVADRDS-RRELVEWLKKEYP- 77 (245)
T ss_pred EEEEeCCcchhhHHHHHHHHHhC----CEEEEecCcHHHHHHHHhc---Ccchheeeecccchhh-HHHHHHHHHhhCC-
Confidence 79999999999999999999999 9999999999887766433 5678889999999999 9999999999998
Q ss_pred CCccEEEeccccCCccccC-CCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 83 QGLNVLVNNAGIAAKFTRL-GLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 83 ~~iD~lv~~ag~~~~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
.+++||||||+....... .+.+.+..+..+++|+.+++++++.++|.|.++ +.+.||+|||..++.|
T Consensus 78 -~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q-----------~~a~IInVSSGLafvP 145 (245)
T COG3967 78 -NLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQ-----------PEATIINVSSGLAFVP 145 (245)
T ss_pred -chheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhC-----------CCceEEEeccccccCc
Confidence 499999999998763333 344667788999999999999999999999987 6899999999999998
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecC
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTD 207 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~ 207 (248)
. ...+.||++|+|++.|+.+|+..++..+|+|.-+.|..|+|+
T Consensus 146 m---~~~PvYcaTKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~ 188 (245)
T COG3967 146 M---ASTPVYCATKAAIHSYTLALREQLKDTSVEVIELAPPLVDTT 188 (245)
T ss_pred c---cccccchhhHHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence 8 888999999999999999999999999999999999999997
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-33 Score=232.89 Aligned_cols=230 Identities=21% Similarity=0.308 Sum_probs=195.4
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHH-hhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALA-QQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|+++||||+++||++++++|+++| ++|++++|+.++++++.+.. ....++.++.+|+++.++ +..+++++.+.+
T Consensus 10 k~ilItGasg~IG~~~a~~l~~~G----~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~~ 84 (258)
T PRK06949 10 KVALVTGASSGLGARFAQVLAQAG----AKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQS-IKAAVAHAETEA 84 (258)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHH-HHHHHHHHHHhc
Confidence 789999999999999999999999 89999999988877774433 334578899999999998 999999998877
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+ ++|++|||||.... .++.+.+.++++..+++|+.+++.+++++++.|.++.... +.....++++++||..+..
T Consensus 85 ~--~~d~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g~iv~~sS~~~~~ 158 (258)
T PRK06949 85 G--TIDILVNNSGVSTT-QKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGA---GNTKPGGRIINIASVAGLR 158 (258)
T ss_pred C--CCCEEEECCCCCCC-CCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcC---CCCCCCeEEEEECcccccC
Confidence 6 59999999998654 5666778899999999999999999999999988653110 0111257999999998876
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC----------------CCCchhhHHHHH
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN----------------APLEVGAATAGI 224 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~----------------~~~~~~~~~~~~ 224 (248)
+. +....|+++|++++.|++.++.++.++||+|++|+||+++|++.... ....|++++..+
T Consensus 159 ~~---~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 235 (258)
T PRK06949 159 VL---PQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWETEQGQKLVSMLPRKRVGKPEDLDGLL 235 (258)
T ss_pred CC---CCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccChHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence 65 67789999999999999999999999999999999999999985421 245699999999
Q ss_pred HHHhhhcccccccceeeeCCe
Q psy11190 225 IQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 225 ~~~~~~~~~~~~g~~~~~~g~ 245 (248)
.+++++.+...+|+++..||.
T Consensus 236 ~~l~~~~~~~~~G~~i~~dgg 256 (258)
T PRK06949 236 LLLAADESQFINGAIISADDG 256 (258)
T ss_pred HHHhChhhcCCCCcEEEeCCC
Confidence 999998888999999999985
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=257.86 Aligned_cols=222 Identities=24% Similarity=0.307 Sum_probs=192.9
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|+++||||++|||+++|++|+++| ++|++++|+.++++++.+.. +.++.++++|+++.++ ++++++++.+.++
T Consensus 6 k~~lITGas~gIG~aia~~l~~~G----~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~-~~~~~~~~~~~~g 78 (520)
T PRK06484 6 RVVLVTGAAGGIGRAACQRFARAG----DQVVVADRNVERARERADSL--GPDHHALAMDVSDEAQ-IREGFEQLHREFG 78 (520)
T ss_pred eEEEEECCCcHHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHh--CCceeEEEeccCCHHH-HHHHHHHHHHHhC
Confidence 789999999999999999999999 89999999988777664333 3467889999999999 9999999999887
Q ss_pred CCCccEEEeccccCCc-cccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 82 DQGLNVLVNNAGIAAK-FTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
++|+||||||...+ ..++.+.+.++|++.+++|+.+++.+++.++|.|.+++ ..++||++||..+..
T Consensus 79 --~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~----------~g~~iv~isS~~~~~ 146 (520)
T PRK06484 79 --RIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQG----------HGAAIVNVASGAGLV 146 (520)
T ss_pred --CCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC----------CCCeEEEECCcccCC
Confidence 59999999997432 25667789999999999999999999999999998741 234999999999988
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC------------------CCCchhhHHH
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN------------------APLEVGAATA 222 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~------------------~~~~~~~~~~ 222 (248)
+. +++..|+++|+++.+|+++|+.|+.++||+|++|+||+++|++.... ...+|+++++
T Consensus 147 ~~---~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~ 223 (520)
T PRK06484 147 AL---PKRTAYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAGKLDPSAVRSRIPLGRLGRPEEIAE 223 (520)
T ss_pred CC---CCCchHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccchhhhHHHHhcCCCCCCcCHHHHHH
Confidence 76 78889999999999999999999999999999999999999985321 1247899999
Q ss_pred HHHHHhhhcccccccceeeeCCe
Q psy11190 223 GIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 223 ~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
.++.+++......+|+++.++|.
T Consensus 224 ~v~~l~~~~~~~~~G~~~~~~gg 246 (520)
T PRK06484 224 AVFFLASDQASYITGSTLVVDGG 246 (520)
T ss_pred HHHHHhCccccCccCceEEecCC
Confidence 99999988778899999988875
|
|
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=234.56 Aligned_cols=224 Identities=25% Similarity=0.295 Sum_probs=188.9
Q ss_pred CceEEEecCCC--chhHHHHHHHHhCCCCCCceEEEeecCc-----------hhHHHHHH-HHhhcCCceeEEeeccCCc
Q psy11190 1 MKSILITGCNR--GLGLGMIKVLVGLGNNQPAHIFATCRNK-----------DKAVELLA-LAQQHSNLHVIELDVTDFS 66 (248)
Q Consensus 1 ~k~~lVtGas~--giG~~ia~~l~~~g~~~~~~V~~~~r~~-----------~~~~~~~~-~~~~~~~~~~~~~D~~~~~ 66 (248)
+|++|||||++ |||.+++++|+++| ++|++.+|+. .....+.+ +...+.++.++++|+++.+
T Consensus 5 ~k~vlItGas~~~giG~~la~~l~~~G----~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 80 (256)
T PRK12748 5 KKIALVTGASRLNGIGAAVCRRLAAKG----IDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPY 80 (256)
T ss_pred CcEEEEeCCCCCCCHHHHHHHHHHHcC----CcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHH
Confidence 37899999994 99999999999999 8999999872 22112322 2222457889999999999
Q ss_pred hhhhhHHHHhhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCC
Q psy11190 67 KQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSS 146 (248)
Q Consensus 67 ~~v~~~~~~i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~ 146 (248)
+ +..+++++.+.++ ++|+||||||.... .++.+.+.+++++.+++|+.+++.+++++++.|.++ .
T Consensus 81 ~-~~~~~~~~~~~~g--~id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----------~ 145 (256)
T PRK12748 81 A-PNRVFYAVSERLG--DPSILINNAAYSTH-TRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGK-----------A 145 (256)
T ss_pred H-HHHHHHHHHHhCC--CCCEEEECCCcCCC-CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhc-----------C
Confidence 9 9999999998887 59999999998654 677788899999999999999999999999998764 4
Q ss_pred CceEEEeecCCCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC------------CC
Q psy11190 147 RAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN------------AP 214 (248)
Q Consensus 147 ~~~iv~vss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~------------~~ 214 (248)
.++||++||..+..+. +++..|+++|+++++|+++++.++.++||+|+.|+||+++|++.... ..
T Consensus 146 ~~~iv~~ss~~~~~~~---~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~~~~~~~~~~~~~~~~ 222 (256)
T PRK12748 146 GGRIINLTSGQSLGPM---PDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITEELKHHLVPKFPQGRV 222 (256)
T ss_pred CeEEEEECCccccCCC---CCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCChhHHHhhhccCCCCCC
Confidence 6899999999887665 67889999999999999999999999999999999999999975421 13
Q ss_pred CchhhHHHHHHHHhhhcccccccceeeeCCee
Q psy11190 215 LEVGAATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
..|++.++.+..++.......+|+++.+||..
T Consensus 223 ~~~~~~a~~~~~l~~~~~~~~~g~~~~~d~g~ 254 (256)
T PRK12748 223 GEPVDAARLIAFLVSEEAKWITGQVIHSEGGF 254 (256)
T ss_pred cCHHHHHHHHHHHhCcccccccCCEEEecCCc
Confidence 47899999999888887778899999998853
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-33 Score=235.34 Aligned_cols=221 Identities=18% Similarity=0.260 Sum_probs=189.3
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHH-HHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELL-ALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|+++||||++|||.+++++|+++| ++|++++|+.+.++... ++.....++.++++|+++.++ ++++++++.+.+
T Consensus 10 k~ilItGasggIG~~la~~l~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-i~~~~~~~~~~~ 84 (264)
T PRK07576 10 KNVVVVGGTSGINLGIAQAFARAG----ANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAA-VEAAFAQIADEF 84 (264)
T ss_pred CEEEEECCCchHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHH-HHHHHHHHHHHc
Confidence 689999999999999999999999 89999999988766653 333334567889999999999 999999998877
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+ ++|++|||||.... ..+.+.+.+++++.+++|+.++++++++++|.|++ .+++|+++||..+..
T Consensus 85 ~--~iD~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~------------~~g~iv~iss~~~~~ 149 (264)
T PRK07576 85 G--PIDVLVSGAAGNFP-APAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRR------------PGASIIQISAPQAFV 149 (264)
T ss_pred C--CCCEEEECCCCCCC-CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh------------CCCEEEEECChhhcc
Confidence 6 59999999987654 66777889999999999999999999999999876 358999999998876
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCccee-cCCCCC-----------------CCCCchhhHHH
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVK-TDMGGS-----------------NAPLEVGAATA 222 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~-t~~~~~-----------------~~~~~~~~~~~ 222 (248)
+. +++..|+++|++++.|+++++.++.++||+|+.|+||+++ |+.... .....|++++.
T Consensus 150 ~~---~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~ 226 (264)
T PRK07576 150 PM---PMQAHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMARLAPSPELQAAVAQSVPLKRNGTKQDIAN 226 (264)
T ss_pred CC---CCccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHHhhcccCHHHHHHHHhcCCCCCCCCHHHHHH
Confidence 65 7788999999999999999999999999999999999997 553211 01346899999
Q ss_pred HHHHHhhhcccccccceeeeCCe
Q psy11190 223 GIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 223 ~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
.++.++++.....+|.++.++|.
T Consensus 227 ~~~~l~~~~~~~~~G~~~~~~gg 249 (264)
T PRK07576 227 AALFLASDMASYITGVVLPVDGG 249 (264)
T ss_pred HHHHHcChhhcCccCCEEEECCC
Confidence 99999988777889999999885
|
|
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-33 Score=234.45 Aligned_cols=229 Identities=20% Similarity=0.199 Sum_probs=179.0
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeec-CchhHHHHHHHHhh--cCCceeEEeeccCCch---hhhhHHHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCR-NKDKAVELLALAQQ--HSNLHVIELDVTDFSK---QQDVLFKD 75 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r-~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~---~v~~~~~~ 75 (248)
++++||||++|||++++++|+++| ++|++++| +.++++++.+.+.. ..++.++.+|++|.++ .++.+++.
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G----~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~ 77 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEG----YRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDA 77 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCC----CeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHH
Confidence 689999999999999999999999 89998765 45566655333321 3467789999999986 13555566
Q ss_pred hhhhhcCCCccEEEeccccCCccccCCCCCh-----------hhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCC
Q psy11190 76 ISDVVKDQGLNVLVNNAGIAAKFTRLGLLKP-----------EQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLG 144 (248)
Q Consensus 76 i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~ 144 (248)
+.+.++ ++|+||||||...+ .++.+.+. +++++.+++|+.++++++++++|.|..+.... .
T Consensus 78 ~~~~~g--~iD~lv~nAG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~-----~ 149 (267)
T TIGR02685 78 CFRAFG--RCDVLVNNASAFYP-TPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQ-----R 149 (267)
T ss_pred HHHccC--CceEEEECCccCCC-CcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhccccc-----C
Confidence 666665 59999999997654 34433333 25889999999999999999999986531100 0
Q ss_pred CCCceEEEeecCCCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC------------C
Q psy11190 145 SSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS------------N 212 (248)
Q Consensus 145 ~~~~~iv~vss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~------------~ 212 (248)
...++|++++|..+..+. +++..|+++|+++++|+++|+.|+.++||+|++|+||+++|+.... .
T Consensus 150 ~~~~~iv~~~s~~~~~~~---~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~~~~~~~~~~~~~~~ 226 (267)
T TIGR02685 150 STNLSIVNLCDAMTDQPL---LGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMPFEVQEDYRRKVPL 226 (267)
T ss_pred CCCeEEEEehhhhccCCC---cccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccccchhHHHHHHHhCCC
Confidence 135789999998887665 7788999999999999999999999999999999999987663211 0
Q ss_pred --CCCchhhHHHHHHHHhhhcccccccceeeeCCe
Q psy11190 213 --APLEVGAATAGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 213 --~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
...+|++++..++++++......+|+.+.++|.
T Consensus 227 ~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~v~gg 261 (267)
T TIGR02685 227 GQREASAEQIADVVIFLVSPKAKYITGTCIKVDGG 261 (267)
T ss_pred CcCCCCHHHHHHHHHHHhCcccCCcccceEEECCc
Confidence 135899999999999988888899999999875
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-33 Score=243.34 Aligned_cols=208 Identities=19% Similarity=0.185 Sum_probs=183.1
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHH-HHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|+++||||++|||++++++|+++| ++|++++|+.++++++.+ +...+.++.++++|++|.++ ++.+++.+.+.+
T Consensus 9 k~vlITGas~gIG~~la~~la~~G----~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~-v~~~~~~~~~~~ 83 (334)
T PRK07109 9 QVVVITGASAGVGRATARAFARRG----AKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEA-VQAAADRAEEEL 83 (334)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHH-HHHHHHHHHHHC
Confidence 789999999999999999999999 899999999888877743 33345578899999999999 999999999888
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+ ++|++|||||.... .++.+.+.+++++.+++|+.+++++++.+++.|.++ +.++||++||..+..
T Consensus 84 g--~iD~lInnAg~~~~-~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~-----------~~g~iV~isS~~~~~ 149 (334)
T PRK07109 84 G--PIDTWVNNAMVTVF-GPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPR-----------DRGAIIQVGSALAYR 149 (334)
T ss_pred C--CCCEEEECCCcCCC-CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----------CCcEEEEeCChhhcc
Confidence 7 59999999998654 677888999999999999999999999999999875 468999999999987
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccC--CCeEEEEecCcceecCCCCC------------CCCCchhhHHHHHHH
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKG--DKIIATAMHPGWVKTDMGGS------------NAPLEVGAATAGIIQ 226 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~--~~i~v~~v~PG~v~t~~~~~------------~~~~~~~~~~~~~~~ 226 (248)
+. +.+..|+++|+++.+|+++++.|+.. .+|+|+.|+||+++|++... ....+|+++++.++.
T Consensus 150 ~~---~~~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~pe~vA~~i~~ 226 (334)
T PRK07109 150 SI---PLQSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDWARSRLPVEPQPVPPIYQPEVVADAILY 226 (334)
T ss_pred CC---CcchHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhhhhhhccccccCCCCCCCHHHHHHHHHH
Confidence 76 77889999999999999999999975 47999999999999997532 113589999999999
Q ss_pred Hhhhc
Q psy11190 227 FIQSL 231 (248)
Q Consensus 227 ~~~~~ 231 (248)
.+..+
T Consensus 227 ~~~~~ 231 (334)
T PRK07109 227 AAEHP 231 (334)
T ss_pred HHhCC
Confidence 99764
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-33 Score=233.65 Aligned_cols=207 Identities=27% Similarity=0.282 Sum_probs=182.3
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhh-
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDV- 79 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~- 79 (248)
||++|||||++|||++++++|+++| ++|++++|+.+.++++.+... +.++.++++|+++.++ +.++++.+.+.
T Consensus 1 mk~vlItGasg~iG~~la~~l~~~G----~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~-v~~~~~~~~~~~ 74 (260)
T PRK08267 1 MKSIFITGAASGIGRATALLFAAEG----WRVGAYDINEAGLAALAAELG-AGNAWTGALDVTDRAA-WDAALADFAAAT 74 (260)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCC----CeEEEEeCCHHHHHHHHHHhc-CCceEEEEecCCCHHH-HHHHHHHHHHHc
Confidence 8999999999999999999999999 899999999888777644432 4578899999999999 89988888765
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
.+ ++|+||||||.... ..+.+.+.+++++.+++|+.+++.+++.+.+.|+.+ +.++|+++||..+.
T Consensus 75 ~~--~id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----------~~~~iv~isS~~~~ 140 (260)
T PRK08267 75 GG--RLDVLFNNAGILRG-GPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKAT-----------PGARVINTSSASAI 140 (260)
T ss_pred CC--CCCEEEECCCCCCC-CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-----------CCCEEEEeCchhhC
Confidence 44 59999999998765 677788999999999999999999999999999875 57899999999988
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC-------------CCCCchhhHHHHHHH
Q psy11190 160 IEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS-------------NAPLEVGAATAGIIQ 226 (248)
Q Consensus 160 ~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~-------------~~~~~~~~~~~~~~~ 226 (248)
.+. ++...|+.+|+++++|+++++.++.++||++++|.||+++|++... ....++++++..++.
T Consensus 141 ~~~---~~~~~Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~ 217 (260)
T PRK08267 141 YGQ---PGLAVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLDGTSNEVDAGSTKRLGVRLTPEDVAEAVWA 217 (260)
T ss_pred cCC---CCchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCcccccccchhhhhhHhhccCCCCHHHHHHHHHH
Confidence 876 7788999999999999999999999999999999999999998653 113678999999999
Q ss_pred Hhhh
Q psy11190 227 FIQS 230 (248)
Q Consensus 227 ~~~~ 230 (248)
++..
T Consensus 218 ~~~~ 221 (260)
T PRK08267 218 AVQH 221 (260)
T ss_pred HHhC
Confidence 8865
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-33 Score=230.85 Aligned_cols=211 Identities=23% Similarity=0.230 Sum_probs=184.3
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHH-hhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALA-QQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
||+++||||+++||++++++|+++| ++|++++|+.++..++.+.. ....++.++++|+++.++ +..+++++.+.
T Consensus 6 ~k~vlItG~sg~iG~~la~~l~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~ 80 (241)
T PRK07454 6 MPRALITGASSGIGKATALAFAKAG----WDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEA-IAPGIAELLEQ 80 (241)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHH-HHHHHHHHHHH
Confidence 6899999999999999999999999 89999999988776664333 234578899999999999 99999999988
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
++ ++|+||||||.... .++.+.+.+++++.+++|+.+++++++.+++.|.++ +.++||++||..+.
T Consensus 81 ~~--~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----------~~~~iv~isS~~~~ 146 (241)
T PRK07454 81 FG--CPDVLINNAGMAYT-GPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRAR-----------GGGLIINVSSIAAR 146 (241)
T ss_pred cC--CCCEEEECCCccCC-CchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhc-----------CCcEEEEEccHHhC
Confidence 77 59999999998764 667778889999999999999999999999999875 56899999999887
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC---------CCCchhhHHHHHHHHhhh
Q psy11190 160 IEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN---------APLEVGAATAGIIQFIQS 230 (248)
Q Consensus 160 ~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~---------~~~~~~~~~~~~~~~~~~ 230 (248)
.+. +++..|+.+|++++.++++++.++.++|+++++|.||+++|++.... ...+++++++.++.+++.
T Consensus 147 ~~~---~~~~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~ 223 (241)
T PRK07454 147 NAF---PQWGAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWDTETVQADFDRSAMLSPEQVAQTILHLAQL 223 (241)
T ss_pred cCC---CCccHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCcccccccccccccccCCCHHHHHHHHHHHHcC
Confidence 766 77889999999999999999999999999999999999999985421 246899999999999987
Q ss_pred ccc
Q psy11190 231 LGE 233 (248)
Q Consensus 231 ~~~ 233 (248)
+..
T Consensus 224 ~~~ 226 (241)
T PRK07454 224 PPS 226 (241)
T ss_pred Ccc
Confidence 544
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-33 Score=230.48 Aligned_cols=223 Identities=22% Similarity=0.301 Sum_probs=190.9
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchh-HHHHHH-HHhhcCCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDK-AVELLA-LAQQHSNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~-~~~~~~-~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
+|+++||||+++||+++|++|+++| ++|++.+|+.++ ..+... ......++.++++|+++.++ +..+++.+.+
T Consensus 2 ~k~vlItG~s~~iG~~la~~l~~~g----~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-v~~~~~~~~~ 76 (245)
T PRK12824 2 KKIALVTGAKRGIGSAIARELLNDG----YRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEE-CAEALAEIEE 76 (245)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcC----CEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHH-HHHHHHHHHH
Confidence 3699999999999999999999999 899999998542 222221 22223468899999999999 9999999998
Q ss_pred hhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 79 VVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
.++ ++|++|||+|.... ..+.+.+.+++++.+++|+.+++++++.+++.|++. +.++||++||..+
T Consensus 77 ~~~--~id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----------~~~~iv~iss~~~ 142 (245)
T PRK12824 77 EEG--PVDILVNNAGITRD-SVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQ-----------GYGRIINISSVNG 142 (245)
T ss_pred HcC--CCCEEEECCCCCCC-CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHh-----------CCeEEEEECChhh
Confidence 877 59999999998765 667788999999999999999999999999999875 5689999999988
Q ss_pred cccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC---------------CCchhhHHHH
Q psy11190 159 SIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA---------------PLEVGAATAG 223 (248)
Q Consensus 159 ~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~---------------~~~~~~~~~~ 223 (248)
..+. +++..|+++|+++++|++.++.++.++||+++.+.||+++|++.+... ..+++++++.
T Consensus 143 ~~~~---~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~ 219 (245)
T PRK12824 143 LKGQ---FGQTNYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQMGPEVLQSIVNQIPMKRLGTPEEIAAA 219 (245)
T ss_pred ccCC---CCChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhhcCHHHHHHHHhcCCCCCCCCHHHHHHH
Confidence 8665 778899999999999999999999999999999999999999865321 3478999999
Q ss_pred HHHHhhhcccccccceeeeCCe
Q psy11190 224 IIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 224 ~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
+..++++.....+|+.+..+|.
T Consensus 220 ~~~l~~~~~~~~~G~~~~~~~g 241 (245)
T PRK12824 220 VAFLVSEAAGFITGETISINGG 241 (245)
T ss_pred HHHHcCccccCccCcEEEECCC
Confidence 9888877777889999998885
|
|
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-33 Score=230.93 Aligned_cols=221 Identities=20% Similarity=0.277 Sum_probs=188.3
Q ss_pred EEEecCCCchhHHHHHHHHhCCCCCCceEEEeecC-chhHHHHHH-HHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 4 ILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRN-KDKAVELLA-LAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 4 ~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~-~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
++||||++|||+++|++|+++| ++|++++|. .+.++.+.+ +.....++.++++|+++.++ +..+++++.+.++
T Consensus 1 vlItGas~giG~~~a~~l~~~G----~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~-~~~~~~~~~~~~~ 75 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADG----FEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVA-CRTLLEADIAEHG 75 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCC----CEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHH-HHHHHHHHHHHcC
Confidence 5899999999999999999999 889888765 444555533 33335578999999999999 9999998888776
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHh-HHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTML-PLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
++|++|||+|.... ..+.+.+.++++..+++|+.+++++++.++ |.++++ +.++||++||..+..
T Consensus 76 --~i~~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----------~~~~iv~vsS~~~~~ 141 (239)
T TIGR01831 76 --AYYGVVLNAGITRD-AAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRAR-----------QGGRIITLASVSGVM 141 (239)
T ss_pred --CCCEEEECCCCCCC-CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhc-----------CCeEEEEEcchhhcc
Confidence 59999999998765 566778899999999999999999999875 555543 468999999999888
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC--------------CCchhhHHHHHHH
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA--------------PLEVGAATAGIIQ 226 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~--------------~~~~~~~~~~~~~ 226 (248)
+. +++..|+++|+++++|+++++.++.++||++++|+||+++|++.+... ..+|+++++.+.+
T Consensus 142 ~~---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~ 218 (239)
T TIGR01831 142 GN---RGQVNYSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEMLAEVEHDLDEALKTVPMNRMGQPAEVASLAGF 218 (239)
T ss_pred CC---CCCcchHHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCccccchhhhHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence 77 778899999999999999999999999999999999999999975321 3479999999999
Q ss_pred HhhhcccccccceeeeCCee
Q psy11190 227 FIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 227 ~~~~~~~~~~g~~~~~~g~~ 246 (248)
++++.....+|..+..+|..
T Consensus 219 l~~~~~~~~~g~~~~~~gg~ 238 (239)
T TIGR01831 219 LMSDGASYVTRQVISVNGGM 238 (239)
T ss_pred HcCchhcCccCCEEEecCCc
Confidence 99988899999999999864
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-33 Score=231.44 Aligned_cols=222 Identities=21% Similarity=0.256 Sum_probs=194.2
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|+++||||+|+||.+++++|+++| ++|++++|+.+..++..+....+.++.++++|++|.++ ++++++++.+.++
T Consensus 6 k~~lItG~sg~iG~~la~~l~~~G----~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~i~~~~~ 80 (252)
T PRK06138 6 RVAIVTGAGSGIGRATAKLFAREG----ARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEA-VEALVDFVAARWG 80 (252)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCC----CeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHH-HHHHHHHHHHHcC
Confidence 689999999999999999999999 89999999987766664433334568899999999999 9999999998877
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+||||+|...+ ..+.+.+.+++++.+++|+.+++.+++.+++.|+++ +.++|+++||..+..+
T Consensus 81 --~id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----------~~~~ii~~sS~~~~~~ 146 (252)
T PRK06138 81 --RLDVLVNNAGFGCG-GTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQ-----------GGGSIVNTASQLALAG 146 (252)
T ss_pred --CCCEEEECCCCCCC-CCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhc-----------CCeEEEEECChhhccC
Confidence 59999999998765 666778899999999999999999999999999875 5689999999988877
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC---------------------CCCchhhH
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN---------------------APLEVGAA 220 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~---------------------~~~~~~~~ 220 (248)
. ++...|+.+|++++.|++.++.++.++|+++++++||++.|++.... ....++++
T Consensus 147 ~---~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 223 (252)
T PRK06138 147 G---RGRAAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRARHPMNRFGTAEEV 223 (252)
T ss_pred C---CCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHhcCCCCCCcCHHHH
Confidence 6 77889999999999999999999999999999999999999875321 12468999
Q ss_pred HHHHHHHhhhcccccccceeeeCCe
Q psy11190 221 TAGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 221 ~~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
++.++.++.......+|.++.++|.
T Consensus 224 a~~~~~l~~~~~~~~~g~~~~~~~g 248 (252)
T PRK06138 224 AQAALFLASDESSFATGTTLVVDGG 248 (252)
T ss_pred HHHHHHHcCchhcCccCCEEEECCC
Confidence 9999999888777889999999885
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-33 Score=258.52 Aligned_cols=210 Identities=20% Similarity=0.224 Sum_probs=185.0
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHH-hhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALA-QQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
+++|||||+||||++++++|+++| ++|++++|+.++++++.+.. ..+.++.++++|++|.++ +.++++++.+.+
T Consensus 316 ~~~lv~G~s~giG~~~a~~l~~~G----~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~~~~~~~ 390 (582)
T PRK05855 316 KLVVVTGAGSGIGRETALAFAREG----AEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADA-MEAFAEWVRAEH 390 (582)
T ss_pred CEEEEECCcCHHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH-HHHHHHHHHHhc
Confidence 589999999999999999999999 89999999988877774433 334578899999999999 999999999888
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+ ++|+||||||.... ..+.+.+.+++++.+++|+.+++++++.++|.|.+++ ..|+||++||.++..
T Consensus 391 g--~id~lv~~Ag~~~~-~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~----------~~g~iv~~sS~~~~~ 457 (582)
T PRK05855 391 G--VPDIVVNNAGIGMA-GGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERG----------TGGHIVNVASAAAYA 457 (582)
T ss_pred C--CCcEEEECCccCCC-CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC----------CCcEEEEECChhhcc
Confidence 7 59999999998765 6778889999999999999999999999999998752 358999999999987
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC-----------------------CCch
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA-----------------------PLEV 217 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~-----------------------~~~~ 217 (248)
+. ++...|+++|+++++|+++|+.|+.++||+|++|+||+++|+|.+... ..+|
T Consensus 458 ~~---~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 534 (582)
T PRK05855 458 PS---RSLPAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVATTRFAGADAEDEARRRGRADKLYQRRGYGP 534 (582)
T ss_pred CC---CCCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccchhccccCCcccchhhhHHhhhhhhccccCCCH
Confidence 76 788999999999999999999999999999999999999998755321 2479
Q ss_pred hhHHHHHHHHhhhcc
Q psy11190 218 GAATAGIIQFIQSLG 232 (248)
Q Consensus 218 ~~~~~~~~~~~~~~~ 232 (248)
+++++.++..+....
T Consensus 535 ~~va~~~~~~~~~~~ 549 (582)
T PRK05855 535 EKVAKAIVDAVKRNK 549 (582)
T ss_pred HHHHHHHHHHHHcCC
Confidence 999999999997643
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-33 Score=235.24 Aligned_cols=216 Identities=23% Similarity=0.306 Sum_probs=185.9
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|+++||||++|||++++++|+++| ++|++.+++.++.. ..++.++++|++|.++ ++.+++++.+.++
T Consensus 10 k~vlItG~s~gIG~~la~~l~~~G----~~v~~~~~~~~~~~--------~~~~~~~~~D~~~~~~-~~~~~~~~~~~~g 76 (266)
T PRK06171 10 KIIIVTGGSSGIGLAIVKELLANG----ANVVNADIHGGDGQ--------HENYQFVPTDVSSAEE-VNHTVAEIIEKFG 76 (266)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCC----CEEEEEeCCccccc--------cCceEEEEccCCCHHH-HHHHHHHHHHHcC
Confidence 789999999999999999999999 89999999876532 2367889999999999 9999999998887
Q ss_pred CCCccEEEeccccCCcc--------ccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEe
Q psy11190 82 DQGLNVLVNNAGIAAKF--------TRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNV 153 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~--------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~v 153 (248)
++|+||||||...+. .++.+.+.++|++.+++|+.+++++++.+++.|.++ +.++||++
T Consensus 77 --~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----------~~g~iv~i 143 (266)
T PRK06171 77 --RIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQ-----------HDGVIVNM 143 (266)
T ss_pred --CCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhc-----------CCcEEEEE
Confidence 599999999976431 123357889999999999999999999999999875 56899999
Q ss_pred ecCCCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCccee-cCCCCC---------------------
Q psy11190 154 SSIMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVK-TDMGGS--------------------- 211 (248)
Q Consensus 154 ss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~-t~~~~~--------------------- 211 (248)
||..+..+. ++...|+++|+++++|+++++.++.++||+||+|+||+++ |++...
T Consensus 144 sS~~~~~~~---~~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (266)
T PRK06171 144 SSEAGLEGS---EGQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGY 220 (266)
T ss_pred ccccccCCC---CCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHhhh
Confidence 999988776 7788999999999999999999999999999999999997 655210
Q ss_pred ----C----CCCchhhHHHHHHHHhhhcccccccceeeeCCee
Q psy11190 212 ----N----APLEVGAATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 212 ----~----~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
. ....|+|++..+.+++++.+...+|+.+.+||..
T Consensus 221 ~~~~~~p~~r~~~~~eva~~~~fl~s~~~~~itG~~i~vdgg~ 263 (266)
T PRK06171 221 TKTSTIPLGRSGKLSEVADLVCYLLSDRASYITGVTTNIAGGK 263 (266)
T ss_pred cccccccCCCCCCHHHhhhheeeeeccccccceeeEEEecCcc
Confidence 0 1236899999999999888889999999999863
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-33 Score=231.99 Aligned_cols=224 Identities=17% Similarity=0.182 Sum_probs=190.3
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHh-hc--CCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQ-QH--SNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~-~~--~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
|++|||||+++||+++++.|+++| ++|++++|+.+..+++.+... .. .++.++.+|+++.++ +..+++++.+
T Consensus 3 k~ilItG~~~~IG~~la~~l~~~g----~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-i~~~~~~~~~ 77 (259)
T PRK12384 3 QVAVVIGGGQTLGAFLCHGLAEEG----YRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQS-VLALSRGVDE 77 (259)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHH-HHHHHHHHHH
Confidence 689999999999999999999999 899999999877766643322 22 368899999999999 9999999988
Q ss_pred hhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 79 VVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
.++ ++|++|||||...+ ..+.+.+.++|++.+++|+.+++++++++++.|.+++ ..++||++||..+
T Consensus 78 ~~~--~id~vv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~----------~~~~iv~~ss~~~ 144 (259)
T PRK12384 78 IFG--RVDLLVYNAGIAKA-AFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDG----------IQGRIIQINSKSG 144 (259)
T ss_pred HcC--CCCEEEECCCcCCC-CCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCC----------CCcEEEEecCccc
Confidence 887 59999999998765 6777889999999999999999999999999998741 2579999999888
Q ss_pred cccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcce-ecCCCCCC-------------------------
Q psy11190 159 SIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWV-KTDMGGSN------------------------- 212 (248)
Q Consensus 159 ~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v-~t~~~~~~------------------------- 212 (248)
..+. +....|+++|+++++++++++.+++++||+|++|.||++ .|++....
T Consensus 145 ~~~~---~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (259)
T PRK12384 145 KVGS---KHNSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPL 221 (259)
T ss_pred ccCC---CCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHHHHHHHhCcc
Confidence 7766 667899999999999999999999999999999999975 67664321
Q ss_pred -CCCchhhHHHHHHHHhhhcccccccceeeeCCee
Q psy11190 213 -APLEVGAATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 213 -~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
....+++++..++.++++.....+|+.+..+|..
T Consensus 222 ~~~~~~~dv~~~~~~l~~~~~~~~~G~~~~v~~g~ 256 (259)
T PRK12384 222 KRGCDYQDVLNMLLFYASPKASYCTGQSINVTGGQ 256 (259)
T ss_pred cCCCCHHHHHHHHHHHcCcccccccCceEEEcCCE
Confidence 1246899999999998876677899988888753
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-33 Score=236.78 Aligned_cols=209 Identities=23% Similarity=0.324 Sum_probs=177.9
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHH-hhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALA-QQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|+++||||+||||+++|++|+++| ++|++++|+.+.++++.+.. ....++.++++|++|.++ +.++++.+.+.+
T Consensus 41 k~vlItGasggIG~~la~~La~~G----~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~-v~~~~~~~~~~~ 115 (293)
T PRK05866 41 KRILLTGASSGIGEAAAEQFARRG----ATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDA-VDALVADVEKRI 115 (293)
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHH-HHHHHHHHHHHc
Confidence 689999999999999999999999 89999999988877774333 334567899999999999 999999999888
Q ss_pred cCCCccEEEeccccCCccccCCCC--ChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLL--KPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
+ ++|++|||||.... .++.+. +.++++..+++|+.+++.+++.++|.|.++ +.++||++||..+
T Consensus 116 g--~id~li~~AG~~~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-----------~~g~iv~isS~~~ 181 (293)
T PRK05866 116 G--GVDILINNAGRSIR-RPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLER-----------GDGHIINVATWGV 181 (293)
T ss_pred C--CCCEEEECCCCCCC-cchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----------CCcEEEEECChhh
Confidence 7 59999999998754 444332 457889999999999999999999999875 5789999999765
Q ss_pred cccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC------CCCchhhHHHHHHHHhhhc
Q psy11190 159 SIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN------APLEVGAATAGIIQFIQSL 231 (248)
Q Consensus 159 ~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~------~~~~~~~~~~~~~~~~~~~ 231 (248)
.... .+++..|+++|+++++|+++++.|+.++||+|++|+||+++|++.... ...+|+++++.++..+...
T Consensus 182 ~~~~--~p~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~~~~~~~~~~~~pe~vA~~~~~~~~~~ 258 (293)
T PRK05866 182 LSEA--SPLFSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAPTKAYDGLPALTADEAAEWMVTAARTR 258 (293)
T ss_pred cCCC--CCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCccccccccccCCCCCCHHHHHHHHHHHHhcC
Confidence 4321 266789999999999999999999999999999999999999997542 2468999999999988753
|
|
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-33 Score=229.02 Aligned_cols=226 Identities=25% Similarity=0.379 Sum_probs=187.0
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEee-cCchhHHHHHHHH-hhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATC-RNKDKAVELLALA-QQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~-r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|++|||||+++||.+++++|+++| ++|++.. |+++...++.+.. ..+.++.++++|++|.++ +.++++.+.+.
T Consensus 3 ~~~lVtG~~~~iG~~~a~~l~~~G----~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~-~~~~~~~~~~~ 77 (248)
T PRK06123 3 KVMIITGASRGIGAATALLAAERG----YAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEAD-VLRLFEAVDRE 77 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCC----CeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHH-HHHHHHHHHHH
Confidence 689999999999999999999999 7888876 4444444443333 224467889999999999 99999999988
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
++ ++|+||||||...+...+.+.+.++|++.+++|+.+++.+++.+++.|.++.. ...|+|+++||..+.
T Consensus 78 ~~--~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------~~~g~iv~~sS~~~~ 147 (248)
T PRK06123 78 LG--RLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHG--------GRGGAIVNVSSMAAR 147 (248)
T ss_pred hC--CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--------CCCeEEEEECchhhc
Confidence 87 59999999998755456777889999999999999999999999999876310 025789999999887
Q ss_pred ccccCCCC-CccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC----------------CCchhhHHH
Q psy11190 160 IEDNTQGG-FHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA----------------PLEVGAATA 222 (248)
Q Consensus 160 ~~~~~~~~-~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~----------------~~~~~~~~~ 222 (248)
.+. ++ +..|+++|+++++|++.++.++.++||+|+.|.||++.|++..... ..+++++++
T Consensus 148 ~~~---~~~~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~d~a~ 224 (248)
T PRK06123 148 LGS---PGEYIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGGEPGRVDRVKAGIPMGRGGTAEEVAR 224 (248)
T ss_pred CCC---CCCccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccCCHHHHHHHHhcCCCCCCcCHHHHHH
Confidence 765 44 4679999999999999999999999999999999999999753210 136899999
Q ss_pred HHHHHhhhcccccccceeeeCCe
Q psy11190 223 GIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 223 ~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
.++.+++......+|..+.++|.
T Consensus 225 ~~~~l~~~~~~~~~g~~~~~~gg 247 (248)
T PRK06123 225 AILWLLSDEASYTTGTFIDVSGG 247 (248)
T ss_pred HHHHHhCccccCccCCEEeecCC
Confidence 99998887667789999998874
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-33 Score=231.20 Aligned_cols=218 Identities=27% Similarity=0.284 Sum_probs=188.7
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|+++||||+++||++++++|+++| ++|++++|+.+.++++.+.. +.++.++++|+++.++ +..+++.+.+.++
T Consensus 7 k~vlItGasg~iG~~la~~l~~~g----~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~-~~~~~~~~~~~~~ 79 (249)
T PRK06500 7 KTALITGGTSGIGLETARQFLAEG----ARVAITGRDPASLEAARAEL--GESALVIRADAGDVAA-QKALAQALAEAFG 79 (249)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC----CEEEEecCCHHHHHHHHHHh--CCceEEEEecCCCHHH-HHHHHHHHHHHhC
Confidence 699999999999999999999999 89999999877665553322 3467889999999999 9999999998877
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|++|||||.... .++.+.+.+++++.+++|+.++++++++++|.|.. .+++++++|..+..+
T Consensus 80 --~id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-------------~~~~i~~~S~~~~~~ 143 (249)
T PRK06500 80 --RLDAVFINAGVAKF-APLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLAN-------------PASIVLNGSINAHIG 143 (249)
T ss_pred --CCCEEEECCCCCCC-CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc-------------CCEEEEEechHhccC
Confidence 59999999998654 56677889999999999999999999999999854 467999999888777
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC---------------------CCCchhhH
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN---------------------APLEVGAA 220 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~---------------------~~~~~~~~ 220 (248)
. +....|+++|+++++|+++++.++.++||++++++||+++|++.+.. ...+|+++
T Consensus 144 ~---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 220 (249)
T PRK06500 144 M---PNSSVYAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPLGRFGTPEEI 220 (249)
T ss_pred C---CCccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCCCCCCcCHHHH
Confidence 6 77889999999999999999999999999999999999999964321 12478999
Q ss_pred HHHHHHHhhhcccccccceeeeCCe
Q psy11190 221 TAGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 221 ~~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
++.++++++......+|+.+..+|.
T Consensus 221 a~~~~~l~~~~~~~~~g~~i~~~gg 245 (249)
T PRK06500 221 AKAVLYLASDESAFIVGSEIIVDGG 245 (249)
T ss_pred HHHHHHHcCccccCccCCeEEECCC
Confidence 9999999887777899999999886
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-33 Score=232.88 Aligned_cols=208 Identities=25% Similarity=0.343 Sum_probs=183.4
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHH-HHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELL-ALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|+++||||+||||++++++|+++| ++|++.+|+.++++++. ++...+.++.++++|+++.++ +..+++.+.+.+
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g----~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~-~~~~~~~i~~~~ 75 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREG----WRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQ-LTALAQACEEKW 75 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHH-HHHHHHHHHHHc
Confidence 479999999999999999999999 89999999988877764 343445678899999999999 999999998887
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+ ++|+||||||.... ..+.+.+.+++++.+++|+.+++.+++.++|.|.++ +.++||++||..+..
T Consensus 76 ~--~id~lI~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----------~~~~iv~vsS~~~~~ 141 (270)
T PRK05650 76 G--GIDVIVNNAGVASG-GFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQ-----------KSGRIVNIASMAGLM 141 (270)
T ss_pred C--CCCEEEECCCCCCC-CCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhC-----------CCCEEEEECChhhcC
Confidence 6 59999999998765 677888899999999999999999999999999875 468999999999887
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC-----------------CCCchhhHHHH
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN-----------------APLEVGAATAG 223 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~-----------------~~~~~~~~~~~ 223 (248)
+. ++...|+++|+++++|+++|+.|+.++||++++|+||+++|++.... ...+++++++.
T Consensus 142 ~~---~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~ 218 (270)
T PRK05650 142 QG---PAMSSYNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNPAMKAQVGKLLEKSPITAADIADY 218 (270)
T ss_pred CC---CCchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCcccccccCchhHHHHHHHHhhcCCCCHHHHHHH
Confidence 76 78889999999999999999999999999999999999999986532 13588999999
Q ss_pred HHHHhhhc
Q psy11190 224 IIQFIQSL 231 (248)
Q Consensus 224 ~~~~~~~~ 231 (248)
++..+...
T Consensus 219 i~~~l~~~ 226 (270)
T PRK05650 219 IYQQVAKG 226 (270)
T ss_pred HHHHHhCC
Confidence 99988763
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-33 Score=237.54 Aligned_cols=221 Identities=24% Similarity=0.338 Sum_probs=175.5
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHH-HHhh--cCCceeEEeeccCCchhhhhHHHHhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQ--HSNLHVIELDVTDFSKQQDVLFKDIS 77 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~-~~~~--~~~~~~~~~D~~~~~~~v~~~~~~i~ 77 (248)
.|+++||||++|||+++|++|+++| ++|++++|+.++.++..+ +... ..++.++++|++|.++ ++++++++.
T Consensus 14 gk~~lITGas~GIG~~~a~~La~~G----~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~s-v~~~~~~~~ 88 (313)
T PRK05854 14 GKRAVVTGASDGLGLGLARRLAAAG----AEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLAS-VAALGEQLR 88 (313)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHH-HHHHHHHHH
Confidence 3799999999999999999999999 899999999888777643 3332 2368899999999999 999999998
Q ss_pred hhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCC
Q psy11190 78 DVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIM 157 (248)
Q Consensus 78 ~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~ 157 (248)
+.++ ++|+||||||...+ +..+.+.++++..|++|+.+++++++.++|.|++ ..++||++||..
T Consensus 89 ~~~~--~iD~li~nAG~~~~--~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~------------~~~riv~vsS~~ 152 (313)
T PRK05854 89 AEGR--PIHLLINNAGVMTP--PERQTTADGFELQFGTNHLGHFALTAHLLPLLRA------------GRARVTSQSSIA 152 (313)
T ss_pred HhCC--CccEEEECCccccC--CccccCcccHHHHhhhhhHHHHHHHHHHHHHHHh------------CCCCeEEEechh
Confidence 8876 69999999998643 3345688999999999999999999999999976 357999999988
Q ss_pred Ccccc---------cCCCCCccchhhHHHHHHHHHHHHhhc--cCCCeEEEEecCcceecCCCCCCC-------------
Q psy11190 158 GSIED---------NTQGGFHPYRCSKAALNAATRSLSIDL--KGDKIIATAMHPGWVKTDMGGSNA------------- 213 (248)
Q Consensus 158 ~~~~~---------~~~~~~~~y~~sK~a~~~~~~~la~e~--~~~~i~v~~v~PG~v~t~~~~~~~------------- 213 (248)
+..+. .++.++..|+.||+++.+|++.|++++ ..+||+||+++||+++|++.....
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~ 232 (313)
T PRK05854 153 ARRGAINWDDLNWERSYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNLLAARPEVGRDKDTLMVRL 232 (313)
T ss_pred hcCCCcCcccccccccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCccccccccccchhHHHHHH
Confidence 76542 122456789999999999999999864 467899999999999999864311
Q ss_pred ----------CCchhhHHHHHHHHhhhcccccccceeeeC
Q psy11190 214 ----------PLEVGAATAGIIQFIQSLGEAHNGGFFEYT 243 (248)
Q Consensus 214 ----------~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 243 (248)
..++++.+...+....++.. .+|.||...
T Consensus 233 ~~~~~~~~~~~~~~~~ga~~~l~~a~~~~~-~~g~~~~~~ 271 (313)
T PRK05854 233 IRSLSARGFLVGTVESAILPALYAATSPDA-EGGAFYGPR 271 (313)
T ss_pred HHHHhhcccccCCHHHHHHHhhheeeCCCC-CCCcEECCC
Confidence 12455555555554443322 357777654
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-33 Score=233.33 Aligned_cols=203 Identities=25% Similarity=0.337 Sum_probs=176.8
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
+|+++||||+||||++++++|+++| ++|++++|+.++++++.+ .++.++++|++|.++ ++.+++++.+.+
T Consensus 3 ~k~vlItGasggiG~~la~~l~~~G----~~V~~~~r~~~~l~~~~~-----~~~~~~~~Dv~~~~~-~~~~~~~~~~~~ 72 (273)
T PRK06182 3 KKVALVTGASSGIGKATARRLAAQG----YTVYGAARRVDKMEDLAS-----LGVHPLSLDVTDEAS-IKAAVDTIIAEE 72 (273)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHh-----CCCeEEEeeCCCHHH-HHHHHHHHHHhc
Confidence 4799999999999999999999999 999999999876654421 257889999999999 999999998887
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+ ++|+||||||.... .++.+.+.++++..+++|+.+++.+++.++|.|+++ +.++||++||..+..
T Consensus 73 ~--~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~-----------~~g~iv~isS~~~~~ 138 (273)
T PRK06182 73 G--RIDVLVNNAGYGSY-GAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQ-----------RSGRIINISSMGGKI 138 (273)
T ss_pred C--CCCEEEECCCcCCC-CchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhc-----------CCCEEEEEcchhhcC
Confidence 6 59999999998754 777888999999999999999999999999999875 568999999988776
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC----------------------------
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN---------------------------- 212 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~---------------------------- 212 (248)
+. +....|+++|+++++|+++++.|+.++||++++|+||+++|++....
T Consensus 139 ~~---~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (273)
T PRK06182 139 YT---PLGAWYHATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAASMRSTY 215 (273)
T ss_pred CC---CCccHhHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHHHHHHHhh
Confidence 55 56678999999999999999999999999999999999999974210
Q ss_pred ---CCCchhhHHHHHHHHhhh
Q psy11190 213 ---APLEVGAATAGIIQFIQS 230 (248)
Q Consensus 213 ---~~~~~~~~~~~~~~~~~~ 230 (248)
...+|+++++.++.++..
T Consensus 216 ~~~~~~~~~~vA~~i~~~~~~ 236 (273)
T PRK06182 216 GSGRLSDPSVIADAISKAVTA 236 (273)
T ss_pred ccccCCCHHHHHHHHHHHHhC
Confidence 124789999999998875
|
|
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-33 Score=230.84 Aligned_cols=223 Identities=23% Similarity=0.379 Sum_probs=184.8
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCc-hhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNK-DKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
||+++||||+||||++++++|+++| ++|++++|+. +.++++.+. ...++.++++|+++.++ ++.+++++.+.
T Consensus 1 ~k~vlItGasggiG~~ia~~l~~~g----~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~-~~~~~~~~~~~ 73 (251)
T PRK06924 1 MRYVIITGTSQGLGEAIANQLLEKG----THVISISRTENKELTKLAEQ--YNSNLTFHSLDLQDVHE-LETNFNEILSS 73 (251)
T ss_pred CcEEEEecCCchHHHHHHHHHHhcC----CEEEEEeCCchHHHHHHHhc--cCCceEEEEecCCCHHH-HHHHHHHHHHh
Confidence 8999999999999999999999999 8999999986 333332221 24578899999999999 99999988877
Q ss_pred hcCCCc--cEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCC
Q psy11190 80 VKDQGL--NVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIM 157 (248)
Q Consensus 80 ~~~~~i--D~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~ 157 (248)
++..++ +++|+|||...+..++.+.+.+++++.+++|+.+++.+++.++|.+.+.+ ..++||++||..
T Consensus 74 ~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~----------~~~~iv~~sS~~ 143 (251)
T PRK06924 74 IQEDNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWK----------VDKRVINISSGA 143 (251)
T ss_pred cCcccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccC----------CCceEEEecchh
Confidence 653222 38999999876556778889999999999999999999999999997641 357899999988
Q ss_pred CcccccCCCCCccchhhHHHHHHHHHHHHhhcc--CCCeEEEEecCcceecCCCCC---------------------CCC
Q psy11190 158 GSIEDNTQGGFHPYRCSKAALNAATRSLSIDLK--GDKIIATAMHPGWVKTDMGGS---------------------NAP 214 (248)
Q Consensus 158 ~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~--~~~i~v~~v~PG~v~t~~~~~---------------------~~~ 214 (248)
+..+. +++..|+++|++++.|++.++.+++ +.||+|++|.||+++|++... ...
T Consensus 144 ~~~~~---~~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (251)
T PRK06924 144 AKNPY---FGWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRFITLKEEGKL 220 (251)
T ss_pred hcCCC---CCcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccchHHHHHHHHhhcCCc
Confidence 87665 7788999999999999999999985 568999999999999987431 124
Q ss_pred CchhhHHHHHHHHhhhcccccccceeeeCC
Q psy11190 215 LEVGAATAGIIQFIQSLGEAHNGGFFEYTG 244 (248)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g 244 (248)
.+|+++++.++.++.+. ...+|+++..++
T Consensus 221 ~~~~dva~~~~~l~~~~-~~~~G~~~~v~~ 249 (251)
T PRK06924 221 LSPEYVAKALRNLLETE-DFPNGEVIDIDE 249 (251)
T ss_pred CCHHHHHHHHHHHHhcc-cCCCCCEeehhh
Confidence 67999999999999873 677899887764
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-32 Score=226.90 Aligned_cols=224 Identities=21% Similarity=0.299 Sum_probs=192.0
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeec-CchhHHHHHH-HHhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCR-NKDKAVELLA-LAQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r-~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|++|||||++|||++++++|+++| ++|+++.| +.+..++..+ ......++.++++|+++.++ ++++++.+.+.
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G----~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~ 75 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDG----YRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFES-CKAAVAKVEAE 75 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCC----CEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHH-HHHHHHHHHHH
Confidence 789999999999999999999999 88998888 5554544432 22234578899999999998 99999999888
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
++ ++|+||||||...+ ..+.+.+.+++++.+++|+.+++.+++.+++.|++. +.++|+++||..+.
T Consensus 76 ~~--~id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----------~~~~iv~iss~~~~ 141 (242)
T TIGR01829 76 LG--PIDVLVNNAGITRD-ATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRER-----------GWGRIINISSVNGQ 141 (242)
T ss_pred cC--CCcEEEECCCCCCC-CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----------CCcEEEEEcchhhc
Confidence 76 59999999998765 567778899999999999999999999999999875 46899999998887
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC---------------CCchhhHHHHH
Q psy11190 160 IEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA---------------PLEVGAATAGI 224 (248)
Q Consensus 160 ~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~---------------~~~~~~~~~~~ 224 (248)
.+. +++..|+++|++++.|++.++.++.++||+++.+.||+++|++.+... ..+|+++++.+
T Consensus 142 ~~~---~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 218 (242)
T TIGR01829 142 KGQ---FGQTNYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMVMAMREDVLNSIVAQIPVGRLGRPEEIAAAV 218 (242)
T ss_pred CCC---CCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCccccccchHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence 766 778899999999999999999999999999999999999999865421 35789999999
Q ss_pred HHHhhhcccccccceeeeCCeec
Q psy11190 225 IQFIQSLGEAHNGGFFEYTGKAI 247 (248)
Q Consensus 225 ~~~~~~~~~~~~g~~~~~~g~~~ 247 (248)
..++.+.....+|+.+.++|...
T Consensus 219 ~~l~~~~~~~~~G~~~~~~gg~~ 241 (242)
T TIGR01829 219 AFLASEEAGYITGATLSINGGLY 241 (242)
T ss_pred HHHcCchhcCccCCEEEecCCcc
Confidence 88887777788999999999753
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-33 Score=231.52 Aligned_cols=223 Identities=17% Similarity=0.208 Sum_probs=191.7
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHH-hhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALA-QQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
+|++|||||+|+||++++++|+++| ++|++.+|++++.+++.+.. ..+.++.++++|++|.++ ++.+++.+.+.
T Consensus 7 ~~~vlItGasg~iG~~la~~l~~~G----~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-~~~~~~~~~~~ 81 (262)
T PRK13394 7 GKTAVVTGAASGIGKEIALELARAG----AAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDA-VNAGIDKVAER 81 (262)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC----CeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHH-HHHHHHHHHHH
Confidence 3789999999999999999999999 89999999988777764433 334467889999999999 99999998887
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHH-HhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLL-KKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l-~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
++ ++|+||||||...+ ..+.+.+.++++..+++|+.+++.+++.+++.| ++. +.++||++||..+
T Consensus 82 ~~--~~d~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-----------~~~~iv~~ss~~~ 147 (262)
T PRK13394 82 FG--SVDILVSNAGIQIV-NPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDD-----------RGGVVIYMGSVHS 147 (262)
T ss_pred cC--CCCEEEECCccCCC-CchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhc-----------CCcEEEEEcchhh
Confidence 76 59999999998754 666677889999999999999999999999999 543 5689999999888
Q ss_pred cccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC--------------------------
Q psy11190 159 SIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN-------------------------- 212 (248)
Q Consensus 159 ~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~-------------------------- 212 (248)
..+. ++...|+++|++++++++.++.++.+.+|++++|+||+++|++.+..
T Consensus 148 ~~~~---~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (262)
T PRK13394 148 HEAS---PLKSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVD 224 (262)
T ss_pred cCCC---CCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHHhcCCCC
Confidence 7665 67789999999999999999999998999999999999999864211
Q ss_pred -CCCchhhHHHHHHHHhhhcccccccceeeeCCe
Q psy11190 213 -APLEVGAATAGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 213 -~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
....++++++.++.+++......+|+.|.++|.
T Consensus 225 ~~~~~~~dva~a~~~l~~~~~~~~~g~~~~~~~g 258 (262)
T PRK13394 225 GVFTTVEDVAQTVLFLSSFPSAALTGQSFVVSHG 258 (262)
T ss_pred CCCCCHHHHHHHHHHHcCccccCCcCCEEeeCCc
Confidence 134789999999999987777788999998876
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-32 Score=227.05 Aligned_cols=222 Identities=21% Similarity=0.309 Sum_probs=191.7
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|+++||||+|+||+++++.|+++| +.|++.+|+.++++++.... +.++.++.+|+++.++ ++.+++++.+.++
T Consensus 7 ~~vlItGa~g~iG~~la~~l~~~g----~~v~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~-~~~~~~~~~~~~~ 79 (245)
T PRK12936 7 RKALVTGASGGIGEEIARLLHAQG----AIVGLHGTRVEKLEALAAEL--GERVKIFPANLSDRDE-VKALGQKAEADLE 79 (245)
T ss_pred CEEEEECCCChHHHHHHHHHHHCC----CEEEEEcCCHHHHHHHHHHh--CCceEEEEccCCCHHH-HHHHHHHHHHHcC
Confidence 789999999999999999999999 89999999887766653322 3467889999999999 9999999998877
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|++|||||...+ .++.+.+.+++++.+++|+.+++++++.+.+.+.++ +.++||++||..+..+
T Consensus 80 --~id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----------~~~~iv~~sS~~~~~~ 145 (245)
T PRK12936 80 --GVDILVNNAGITKD-GLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRR-----------RYGRIINITSVVGVTG 145 (245)
T ss_pred --CCCEEEECCCCCCC-CccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHh-----------CCCEEEEECCHHhCcC
Confidence 59999999998765 667777889999999999999999999999988764 5689999999988877
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC---------------CCchhhHHHHHHH
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA---------------PLEVGAATAGIIQ 226 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~---------------~~~~~~~~~~~~~ 226 (248)
. +.+..|+++|+++..|++.++.++.++|+++++++||+++|++..... ..+|++++..+..
T Consensus 146 ~---~~~~~Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~ 222 (245)
T PRK12936 146 N---PGQANYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKLNDKQKEAIMGAIPMKRMGTGAEVASAVAY 222 (245)
T ss_pred C---CCCcchHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcccChHHHHHHhcCCCCCCCcCHHHHHHHHHH
Confidence 6 778899999999999999999999999999999999999998864321 2468999999988
Q ss_pred HhhhcccccccceeeeCCeec
Q psy11190 227 FIQSLGEAHNGGFFEYTGKAI 247 (248)
Q Consensus 227 ~~~~~~~~~~g~~~~~~g~~~ 247 (248)
+++......+|+.+..+|..+
T Consensus 223 l~~~~~~~~~G~~~~~~~g~~ 243 (245)
T PRK12936 223 LASSEAAYVTGQTIHVNGGMA 243 (245)
T ss_pred HcCccccCcCCCEEEECCCcc
Confidence 887766678999999888754
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-33 Score=229.74 Aligned_cols=209 Identities=16% Similarity=0.178 Sum_probs=172.8
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchh-HHHHHHHHhh-c-CCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDK-AVELLALAQQ-H-SNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~-~~~~~~~~~~-~-~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
|+++||||++|||+++|++|+++|. ++|++++|+.++ ++++.+.+.. + .++.++++|++|.++ +.++++++.+
T Consensus 9 ~~vlItGas~giG~~la~~l~~~gg---~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~-~~~~~~~~~~ 84 (253)
T PRK07904 9 QTILLLGGTSEIGLAICERYLKNAP---ARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDS-HPKVIDAAFA 84 (253)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCC---CeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHH-HHHHHHHHHh
Confidence 6899999999999999999999852 899999999876 6666433322 2 268899999999999 8888888876
Q ss_pred hhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 79 VVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
.+ ++|++|||+|...+ ......+.++..+.+++|+.+++.+++.++|.|.++ +.++|+++||..+
T Consensus 85 -~g--~id~li~~ag~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~-----------~~~~iv~isS~~g 149 (253)
T PRK07904 85 -GG--DVDVAIVAFGLLGD-AEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQ-----------GFGQIIAMSSVAG 149 (253)
T ss_pred -cC--CCCEEEEeeecCCc-hhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhc-----------CCceEEEEechhh
Confidence 34 59999999998643 111112344556789999999999999999999885 5789999999988
Q ss_pred cccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC----CCchhhHHHHHHHHhhhcc
Q psy11190 159 SIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA----PLEVGAATAGIIQFIQSLG 232 (248)
Q Consensus 159 ~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~~ 232 (248)
..+. ++...|++||+++.+|+++|+.|+.++||+|++|+||+++|++..... ..+|+++++.++..+.+..
T Consensus 150 ~~~~---~~~~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~A~~i~~~~~~~~ 224 (253)
T PRK07904 150 ERVR---RSNFVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAHAKEAPLTVDKEDVAKLAVTAVAKGK 224 (253)
T ss_pred cCCC---CCCcchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhccCCCCCCCCCHHHHHHHHHHHHHcCC
Confidence 7655 677889999999999999999999999999999999999999876532 3689999999999987643
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-33 Score=237.24 Aligned_cols=220 Identities=24% Similarity=0.258 Sum_probs=178.0
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|+++||||++|||++++++|+++| ++|++++|+.++.++..+... .+.++++|++|.++ ++++++++.+.++
T Consensus 27 k~vlITGasggIG~~~a~~L~~~G----~~Vv~~~R~~~~~~~~~~~l~---~v~~~~~Dl~d~~~-v~~~~~~~~~~~~ 98 (315)
T PRK06196 27 KTAIVTGGYSGLGLETTRALAQAG----AHVIVPARRPDVAREALAGID---GVEVVMLDLADLES-VRAFAERFLDSGR 98 (315)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHhh---hCeEEEccCCCHHH-HHHHHHHHHhcCC
Confidence 789999999999999999999999 899999999887666533322 47889999999999 9999999988776
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+||||||...+ ....+.++|+..+++|+.+++++++.++|.|.++ +.++||++||..+..+
T Consensus 99 --~iD~li~nAg~~~~---~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~-----------~~~~iV~vSS~~~~~~ 162 (315)
T PRK06196 99 --RIDILINNAGVMAC---PETRVGDGWEAQFATNHLGHFALVNLLWPALAAG-----------AGARVVALSSAGHRRS 162 (315)
T ss_pred --CCCEEEECCCCCCC---CCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhc-----------CCCeEEEECCHHhccC
Confidence 59999999997543 2345678899999999999999999999999875 4589999999765332
Q ss_pred c---------cCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC--------------------
Q psy11190 162 D---------NTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN-------------------- 212 (248)
Q Consensus 162 ~---------~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~-------------------- 212 (248)
. .+..++..|+.+|+++..|++.++.++.++||+|++|+||+++|++.+..
T Consensus 163 ~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (315)
T PRK06196 163 PIRWDDPHFTRGYDKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPREEQVALGWVDEHGNPIDP 242 (315)
T ss_pred CCCccccCccCCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChhhhhhhhhhhhhhhhhhh
Confidence 1 12244568999999999999999999999999999999999999986431
Q ss_pred CCCchhhHHHHHHHHhhhcccccccceeeeCCe
Q psy11190 213 APLEVGAATAGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
...+|++++..++.++..+.....+..|..+++
T Consensus 243 ~~~~~~~~a~~~~~l~~~~~~~~~~g~~~~~~~ 275 (315)
T PRK06196 243 GFKTPAQGAATQVWAATSPQLAGMGGLYCEDCD 275 (315)
T ss_pred hcCCHhHHHHHHHHHhcCCccCCCCCeEeCCCc
Confidence 134689999999999976554433344434543
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-33 Score=232.35 Aligned_cols=203 Identities=28% Similarity=0.427 Sum_probs=176.7
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
||++|||||+||||++++++|+++| ++|++++|+.++.+++.+ ..+.++.+|+++.++ ++++++.+.+.+
T Consensus 1 mk~vlItGasggiG~~la~~l~~~G----~~V~~~~r~~~~~~~~~~-----~~~~~~~~Dl~~~~~-~~~~~~~~~~~~ 70 (274)
T PRK05693 1 MPVVLITGCSSGIGRALADAFKAAG----YEVWATARKAEDVEALAA-----AGFTAVQLDVNDGAA-LARLAEELEAEH 70 (274)
T ss_pred CCEEEEecCCChHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHH-----CCCeEEEeeCCCHHH-HHHHHHHHHHhc
Confidence 8999999999999999999999999 899999999776554421 246788999999999 999999998877
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+ ++|+||||||.... .++.+.+.+++++.+++|+.+++.+++.++|.|.+ ..++|+++||..+..
T Consensus 71 ~--~id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~------------~~g~iv~isS~~~~~ 135 (274)
T PRK05693 71 G--GLDVLINNAGYGAM-GPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRR------------SRGLVVNIGSVSGVL 135 (274)
T ss_pred C--CCCEEEECCCCCCC-CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh------------cCCEEEEECCccccC
Confidence 6 59999999998654 66777899999999999999999999999999976 468999999999887
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC---------------------------
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA--------------------------- 213 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~--------------------------- 213 (248)
+. +....|+++|++++.|+++++.|++++||+|++|+||+++|++.+...
T Consensus 136 ~~---~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (274)
T PRK05693 136 VT---PFAGAYCASKAAVHALSDALRLELAPFGVQVMEVQPGAIASQFASNASREAEQLLAEQSPWWPLREHIQARARAS 212 (274)
T ss_pred CC---CCccHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccccccccccccchhhcCCCCCccHHHHHHHHHHHHhc
Confidence 76 677899999999999999999999999999999999999999865311
Q ss_pred ---CCchhhHHHHHHHHhhhc
Q psy11190 214 ---PLEVGAATAGIIQFIQSL 231 (248)
Q Consensus 214 ---~~~~~~~~~~~~~~~~~~ 231 (248)
+.+|+++++.++..+...
T Consensus 213 ~~~~~~~~~~a~~i~~~~~~~ 233 (274)
T PRK05693 213 QDNPTPAAEFARQLLAAVQQS 233 (274)
T ss_pred cCCCCCHHHHHHHHHHHHhCC
Confidence 246889999998888653
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-32 Score=229.65 Aligned_cols=225 Identities=23% Similarity=0.364 Sum_probs=193.2
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCce-EEEeecCchhHHHHHH-HHhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAH-IFATCRNKDKAVELLA-LAQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~-V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|+++||||+++||+.++++|+++| ++ |++++|+.++.....+ +.....++.++.+|+++.++ ++++++.+.+.
T Consensus 7 k~vlItGa~g~iG~~la~~l~~~G----~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~ 81 (260)
T PRK06198 7 KVALVTGGTQGLGAAIARAFAERG----AAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVED-CRRVVAAADEA 81 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCC----CCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHH-HHHHHHHHHHH
Confidence 689999999999999999999999 67 9999999777665533 32334467889999999998 99999999888
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
++ ++|++|||+|.... ..+.+.+.++++..+++|+.+++.+++.+++.|.++. ..++++++||..+.
T Consensus 82 ~g--~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~----------~~g~iv~~ss~~~~ 148 (260)
T PRK06198 82 FG--RLDALVNAAGLTDR-GTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRK----------AEGTIVNIGSMSAH 148 (260)
T ss_pred hC--CCCEEEECCCcCCC-CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC----------CCCEEEEECCcccc
Confidence 77 59999999998764 6667789999999999999999999999999997642 35899999999887
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC----------------------CCCCch
Q psy11190 160 IEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS----------------------NAPLEV 217 (248)
Q Consensus 160 ~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~----------------------~~~~~~ 217 (248)
.+. +++..|+++|+++++|+++++.++.+.||+++.|+||+++|++... ....++
T Consensus 149 ~~~---~~~~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (260)
T PRK06198 149 GGQ---PFLAAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQPFGRLLDP 225 (260)
T ss_pred cCC---CCcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhccCCccCCcCH
Confidence 665 6788999999999999999999999999999999999999986311 012479
Q ss_pred hhHHHHHHHHhhhcccccccceeeeCCeec
Q psy11190 218 GAATAGIIQFIQSLGEAHNGGFFEYTGKAI 247 (248)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~ 247 (248)
+++++.+..++.......+|+++.++|..+
T Consensus 226 ~~~a~~~~~l~~~~~~~~~G~~~~~~~~~~ 255 (260)
T PRK06198 226 DEVARAVAFLLSDESGLMTGSVIDFDQSVW 255 (260)
T ss_pred HHHHHHHHHHcChhhCCccCceEeECCccc
Confidence 999999999998877789999999999865
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-32 Score=226.96 Aligned_cols=220 Identities=23% Similarity=0.318 Sum_probs=188.2
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCch-hHHHHH-HHHhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKD-KAVELL-ALAQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~-~~~~~~-~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|+++||||++|||+++++.|+++| ++|+++.|+.+ ..+++. ++...+.++.++++|+++.++ ++++++++.+.
T Consensus 6 ~~vlItG~~~~iG~~la~~l~~~g----~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-~~~~~~~~~~~ 80 (245)
T PRK12937 6 KVAIVTGASRGIGAAIARRLAADG----FAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAA-VTRLFDAAETA 80 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC----CEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHH-HHHHHHHHHHH
Confidence 789999999999999999999999 88888777544 344443 333335578899999999999 99999999998
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
++ ++|++|||||.... .++.+.+.+++++.+++|+.+++.+++++++.|.. .++|+++||..+.
T Consensus 81 ~~--~id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-------------~~~iv~~ss~~~~ 144 (245)
T PRK12937 81 FG--RIDVLVNNAGVMPL-GTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQ-------------GGRIINLSTSVIA 144 (245)
T ss_pred cC--CCCEEEECCCCCCC-CChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhcc-------------CcEEEEEeecccc
Confidence 87 59999999998654 66777889999999999999999999999998853 5789999998887
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC----------------CCCchhhHHHH
Q psy11190 160 IEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN----------------APLEVGAATAG 223 (248)
Q Consensus 160 ~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~----------------~~~~~~~~~~~ 223 (248)
.+. +++..|+++|++++.|++.++.++.+.||+++.|+||+++|+|.... ...++++++..
T Consensus 145 ~~~---~~~~~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~ 221 (245)
T PRK12937 145 LPL---PGYGPYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNGKSAEQIDQLAGLAPLERLGTPEEIAAA 221 (245)
T ss_pred CCC---CCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhcccCCHHHHHHHHhcCCCCCCCCHHHHHHH
Confidence 766 77889999999999999999999999999999999999999984221 13478999999
Q ss_pred HHHHhhhcccccccceeeeCCe
Q psy11190 224 IIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 224 ~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
++.+++......+|.++..+|.
T Consensus 222 ~~~l~~~~~~~~~g~~~~~~~g 243 (245)
T PRK12937 222 VAFLAGPDGAWVNGQVLRVNGG 243 (245)
T ss_pred HHHHcCccccCccccEEEeCCC
Confidence 9999988777889999988874
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-32 Score=227.98 Aligned_cols=222 Identities=22% Similarity=0.313 Sum_probs=194.9
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHH-HHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|+++||||+++||++++++|+++| ++|++++|+.++.++... +.....++.++.+|+++.++ ++.+++.+.+.+
T Consensus 5 ~~vlItG~sg~iG~~la~~l~~~g----~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-~~~~~~~~~~~~ 79 (258)
T PRK12429 5 KVALVTGAASGIGLEIALALAKEG----AKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEA-INAGIDYAVETF 79 (258)
T ss_pred CEEEEECCCchHHHHHHHHHHHCC----CeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHH-HHHHHHHHHHHc
Confidence 789999999999999999999999 899999999888776643 33335578899999999999 999999999887
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+ ++|+||||||...+ ....+.+.++++..+++|+.+++++++.+++.|+++ +.++||++||..+..
T Consensus 80 ~--~~d~vi~~a~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----------~~~~iv~iss~~~~~ 145 (258)
T PRK12429 80 G--GVDILVNNAGIQHV-APIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQ-----------GGGRIINMASVHGLV 145 (258)
T ss_pred C--CCCEEEECCCCCCC-CChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhc-----------CCeEEEEEcchhhcc
Confidence 6 59999999998765 667778899999999999999999999999999885 578999999999887
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC---------------------------CC
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS---------------------------NA 213 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~---------------------------~~ 213 (248)
+. ++...|+++|++++.|++.++.++.+.||+++.+.||+++|++... ..
T Consensus 146 ~~---~~~~~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (258)
T PRK12429 146 GS---AGKAAYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLPLVPQKR 222 (258)
T ss_pred CC---CCcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhhccccCCChHHHHHHHHhccCCccc
Confidence 76 7889999999999999999999999999999999999999987431 11
Q ss_pred CCchhhHHHHHHHHhhhcccccccceeeeCCe
Q psy11190 214 PLEVGAATAGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
..+++++++.++.++.+.....+|+.|.++|.
T Consensus 223 ~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g 254 (258)
T PRK12429 223 FTTVEEIADYALFLASFAAKGVTGQAWVVDGG 254 (258)
T ss_pred cCCHHHHHHHHHHHcCccccCccCCeEEeCCC
Confidence 35689999999999988777788999999885
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-32 Score=227.86 Aligned_cols=228 Identities=19% Similarity=0.263 Sum_probs=188.8
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHH-hh--cCCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALA-QQ--HSNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~-~~--~~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
|+++||||++|||+++|+.|+++| ++|++++|+.++++++.+.. .. ...+.++++|++|.++ +..+++++.+
T Consensus 5 k~vlItGas~giG~~~a~~l~~~g----~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~-~~~~~~~~~~ 79 (256)
T PRK09186 5 KTILITGAGGLIGSALVKAILEAG----GIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQES-LEEFLSKSAE 79 (256)
T ss_pred CEEEEECCCchHHHHHHHHHHHCC----CEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHH-HHHHHHHHHH
Confidence 789999999999999999999999 89999999988877664333 22 2245677999999999 9999999988
Q ss_pred hhcCCCccEEEeccccCCc--cccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecC
Q psy11190 79 VVKDQGLNVLVNNAGIAAK--FTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSI 156 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~ 156 (248)
.++ ++|+|||||+.... ...+.+.+.++++..+++|+.+++.+++.++|.|+++ +.++||++||.
T Consensus 80 ~~~--~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----------~~~~iv~~sS~ 146 (256)
T PRK09186 80 KYG--KIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQ-----------GGGNLVNISSI 146 (256)
T ss_pred HcC--CccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhc-----------CCceEEEEech
Confidence 877 59999999976432 2456778899999999999999999999999999875 46799999998
Q ss_pred CCccccc-------CCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCC-----------CCCCCchh
Q psy11190 157 MGSIEDN-------TQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGG-----------SNAPLEVG 218 (248)
Q Consensus 157 ~~~~~~~-------~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~-----------~~~~~~~~ 218 (248)
.+..+.. +......|+++|+++++|+++++.++.++||+|+.|+||++.++... .....+|+
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (256)
T PRK09186 147 YGVVAPKFEIYEGTSMTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQPEAFLNAYKKCCNGKGMLDPD 226 (256)
T ss_pred hhhccccchhccccccCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCCHHHHHHHHhcCCccCCCCHH
Confidence 8764321 00122469999999999999999999999999999999999876421 12357899
Q ss_pred hHHHHHHHHhhhcccccccceeeeCCeec
Q psy11190 219 AATAGIIQFIQSLGEAHNGGFFEYTGKAI 247 (248)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~g~~~~~~g~~~ 247 (248)
++++.++.++++.....+|+++..+|...
T Consensus 227 dva~~~~~l~~~~~~~~~g~~~~~~~g~~ 255 (256)
T PRK09186 227 DICGTLVFLLSDQSKYITGQNIIVDDGFS 255 (256)
T ss_pred HhhhhHhheeccccccccCceEEecCCcc
Confidence 99999999998888888999999888643
|
|
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-32 Score=227.92 Aligned_cols=220 Identities=25% Similarity=0.351 Sum_probs=188.6
Q ss_pred EEEecCCCchhHHHHHHHHhCCCCCCceEEEeecC-chhHHHHHHHHhh-c--CCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 4 ILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRN-KDKAVELLALAQQ-H--SNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 4 ~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~-~~~~~~~~~~~~~-~--~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
++||||++|||+++++.|+++| ++|++++|+ .+.++++.+.... . ..+..+++|++|.++ ++++++++.+.
T Consensus 2 ilVtG~~~~iG~~~a~~l~~~G----~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~ 76 (251)
T PRK07069 2 AFITGAAGGLGRAIARRMAEQG----AKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQ-WQALLAQAADA 76 (251)
T ss_pred EEEECCCChHHHHHHHHHHHCC----CEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHH-HHHHHHHHHHH
Confidence 8999999999999999999999 899999998 5556665433322 1 234568899999999 99999999988
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
++ ++|++|||||.... ..+.+.+.+++++.+++|+.+++.+++.+++.|+++ +.++|+++||..+.
T Consensus 77 ~~--~id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----------~~~~ii~~ss~~~~ 142 (251)
T PRK07069 77 MG--GLSVLVNNAGVGSF-GAIEQIELDEWRRVMAINVESIFLGCKHALPYLRAS-----------QPASIVNISSVAAF 142 (251)
T ss_pred cC--CccEEEECCCcCCC-CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc-----------CCcEEEEecChhhc
Confidence 87 59999999998765 667778899999999999999999999999999875 46899999999988
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHhhccCCC--eEEEEecCcceecCCCCCC--------------------CCCch
Q psy11190 160 IEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDK--IIATAMHPGWVKTDMGGSN--------------------APLEV 217 (248)
Q Consensus 160 ~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~--i~v~~v~PG~v~t~~~~~~--------------------~~~~~ 217 (248)
.+. +++..|+++|++++.|+++++.++.+++ |+|+.|+||+++|++.... ...+|
T Consensus 143 ~~~---~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (251)
T PRK07069 143 KAE---PDYTAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVPLGRLGEP 219 (251)
T ss_pred cCC---CCCchhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccCCCCCCcCH
Confidence 776 7788999999999999999999997664 9999999999999986421 12479
Q ss_pred hhHHHHHHHHhhhcccccccceeeeCCe
Q psy11190 218 GAATAGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
+++++.++.+++......+|+.+..+|.
T Consensus 220 ~~va~~~~~l~~~~~~~~~g~~i~~~~g 247 (251)
T PRK07069 220 DDVAHAVLYLASDESRFVTGAELVIDGG 247 (251)
T ss_pred HHHHHHHHHHcCccccCccCCEEEECCC
Confidence 9999999998888778899999988875
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-32 Score=225.46 Aligned_cols=212 Identities=23% Similarity=0.312 Sum_probs=176.2
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeec-CchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCR-NKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|++|||||+||||++++++|+++| ++|++..+ +.+..+++.+. ..+.++.+|++|.++ +..++++ +
T Consensus 7 k~vlItGasggIG~~~a~~l~~~G----~~v~~~~~~~~~~~~~l~~~----~~~~~~~~D~~~~~~-~~~~~~~----~ 73 (237)
T PRK12742 7 KKVLVLGGSRGIGAAIVRRFVTDG----ANVRFTYAGSKDAAERLAQE----TGATAVQTDSADRDA-VIDVVRK----S 73 (237)
T ss_pred CEEEEECCCChHHHHHHHHHHHCC----CEEEEecCCCHHHHHHHHHH----hCCeEEecCCCCHHH-HHHHHHH----h
Confidence 689999999999999999999999 88888765 44444443221 135678899999877 6665542 3
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+ ++|++|||||.... ....+.+.++|++.+++|+.+++.+++.+++.|.. .+++|++||..+..
T Consensus 74 ~--~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-------------~g~iv~isS~~~~~ 137 (237)
T PRK12742 74 G--ALDILVVNAGIAVF-GDALELDADDIDRLFKINIHAPYHASVEAARQMPE-------------GGRIIIIGSVNGDR 137 (237)
T ss_pred C--CCcEEEECCCCCCC-CCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhc-------------CCeEEEEecccccc
Confidence 3 59999999998654 55667889999999999999999999999998853 57999999988743
Q ss_pred -cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC--------------CCchhhHHHHHH
Q psy11190 161 -EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA--------------PLEVGAATAGII 225 (248)
Q Consensus 161 -~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~--------------~~~~~~~~~~~~ 225 (248)
+. +++..|+++|++++.+++.++.++.++||+||+|+||+++|++..... ..+|++++..+.
T Consensus 138 ~~~---~~~~~Y~~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~ 214 (237)
T PRK12742 138 MPV---AGMAAYAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANPANGPMKDMMHSFMAIKRHGRPEEVAGMVA 214 (237)
T ss_pred CCC---CCCcchHHhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCccccccHHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence 43 678899999999999999999999999999999999999999854321 357999999999
Q ss_pred HHhhhcccccccceeeeCCe
Q psy11190 226 QFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 226 ~~~~~~~~~~~g~~~~~~g~ 245 (248)
+++++.....+|+.+.+||.
T Consensus 215 ~l~s~~~~~~~G~~~~~dgg 234 (237)
T PRK12742 215 WLAGPEASFVTGAMHTIDGA 234 (237)
T ss_pred HHcCcccCcccCCEEEeCCC
Confidence 99988888899999999986
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-32 Score=228.95 Aligned_cols=222 Identities=20% Similarity=0.230 Sum_probs=187.7
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
+|+++||||++|||.+++++|+++| ++|++++|+.++.++..+.. ...++++|+++.++ ++++++++.+.+
T Consensus 7 ~~~vlItGasggIG~~~a~~l~~~G----~~v~~~~r~~~~~~~~~~~~----~~~~~~~D~~~~~~-~~~~~~~~~~~~ 77 (255)
T PRK06057 7 GRVAVITGGGSGIGLATARRLAAEG----ATVVVGDIDPEAGKAAADEV----GGLFVPTDVTDEDA-VNALFDTAAETY 77 (255)
T ss_pred CCEEEEECCCchHHHHHHHHHHHcC----CEEEEEeCCHHHHHHHHHHc----CCcEEEeeCCCHHH-HHHHHHHHHHHc
Confidence 3789999999999999999999999 89999999877665543322 12578999999999 999999998877
Q ss_pred cCCCccEEEeccccCCc-cccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 81 KDQGLNVLVNNAGIAAK-FTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
+ ++|++|||||...+ ..++.+.+.+.+++.+++|+.+++++++.++|.|.++ +.++|+++||..+.
T Consensus 78 ~--~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-----------~~g~iv~~sS~~~~ 144 (255)
T PRK06057 78 G--SVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQ-----------GKGSIINTASFVAV 144 (255)
T ss_pred C--CCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHh-----------CCcEEEEEcchhhc
Confidence 6 59999999997643 1455677889999999999999999999999999875 56899999998776
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC------------------CCCchhhHH
Q psy11190 160 IEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN------------------APLEVGAAT 221 (248)
Q Consensus 160 ~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~------------------~~~~~~~~~ 221 (248)
.+.. .++..|+++|+++..+++.++.++.++||+|++|+||+++|++.... ...+|++++
T Consensus 145 ~g~~--~~~~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 222 (255)
T PRK06057 145 MGSA--TSQISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAKDPERAARRLVHVPMGRFAEPEEIA 222 (255)
T ss_pred cCCC--CCCcchHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccCCHHHHHHHHhcCCCCCCcCHHHHH
Confidence 6541 35678999999999999999999999999999999999999985432 135689999
Q ss_pred HHHHHHhhhcccccccceeeeCCee
Q psy11190 222 AGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 222 ~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
+.++.++++.....+|..+..+|..
T Consensus 223 ~~~~~l~~~~~~~~~g~~~~~~~g~ 247 (255)
T PRK06057 223 AAVAFLASDDASFITASTFLVDGGI 247 (255)
T ss_pred HHHHHHhCccccCccCcEEEECCCe
Confidence 9999999887888899999888864
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-32 Score=221.90 Aligned_cols=219 Identities=33% Similarity=0.501 Sum_probs=185.1
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
||+++||||+++||++++++|+++| ++|++++|+.++.+++.. ..+.++++|+++.++ ++.+++++..
T Consensus 1 ~~~vlvtG~sg~iG~~la~~L~~~G----~~v~~~~r~~~~~~~~~~-----~~~~~~~~D~~~~~~-v~~~~~~~~~-- 68 (222)
T PRK06953 1 MKTVLIVGASRGIGREFVRQYRADG----WRVIATARDAAALAALQA-----LGAEALALDVADPAS-VAGLAWKLDG-- 68 (222)
T ss_pred CceEEEEcCCCchhHHHHHHHHhCC----CEEEEEECCHHHHHHHHh-----ccceEEEecCCCHHH-HHHHHHHhcC--
Confidence 8999999999999999999999999 899999999776654432 235689999999988 8887766642
Q ss_pred cCCCccEEEeccccCCc-cccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 81 KDQGLNVLVNNAGIAAK-FTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
.++|++|||+|.... .....+.+.+++++.+++|+.+++.+++.++|.|.+ ..+++++++|..+.
T Consensus 69 --~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~------------~~g~iv~isS~~~~ 134 (222)
T PRK06953 69 --EALDAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEA------------AGGVLAVLSSRMGS 134 (222)
T ss_pred --CCCCEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhc------------cCCeEEEEcCcccc
Confidence 259999999998632 234556789999999999999999999999999865 36789999998877
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCCCCchhhHHHHHHHHhhhcccccccce
Q psy11190 160 IEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQSLGEAHNGGF 239 (248)
Q Consensus 160 ~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 239 (248)
++..+......|+++|++++.+++.++.++ .+++++.|.||+++|++.+...+..+++.++.++..+.......++.|
T Consensus 135 ~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~--~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (222)
T PRK06953 135 IGDATGTTGWLYRASKAALNDALRAASLQA--RHATCIALHPGWVRTDMGGAQAALDPAQSVAGMRRVIAQATRRDNGRF 212 (222)
T ss_pred cccccCCCccccHHhHHHHHHHHHHHhhhc--cCcEEEEECCCeeecCCCCCCCCCCHHHHHHHHHHHHHhcCcccCceE
Confidence 664222223469999999999999999886 479999999999999998887788999999999999988888899999
Q ss_pred eeeCCeec
Q psy11190 240 FEYTGKAI 247 (248)
Q Consensus 240 ~~~~g~~~ 247 (248)
+.++++.+
T Consensus 213 ~~~~~~~~ 220 (222)
T PRK06953 213 FQYDGVEL 220 (222)
T ss_pred EeeCCcCC
Confidence 99999876
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-32 Score=231.52 Aligned_cols=207 Identities=31% Similarity=0.415 Sum_probs=179.0
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
||++|||||+||||++++++|+++| ++|++++|+.++++.+.+.. ..++.++++|++|.++ +..+++.+.+.+
T Consensus 4 ~~~vlVtGasggiG~~la~~l~~~G----~~V~~~~r~~~~~~~l~~~~--~~~~~~~~~D~~d~~~-~~~~~~~~~~~~ 76 (277)
T PRK06180 4 MKTWLITGVSSGFGRALAQAALAAG----HRVVGTVRSEAARADFEALH--PDRALARLLDVTDFDA-IDAVVADAEATF 76 (277)
T ss_pred CCEEEEecCCChHHHHHHHHHHhCc----CEEEEEeCCHHHHHHHHhhc--CCCeeEEEccCCCHHH-HHHHHHHHHHHh
Confidence 3789999999999999999999999 89999999987766553322 3468889999999999 999999998887
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+ ++|+||||||.... .+..+.+.+++++.+++|+.+++++++.++|.|+++ ..++||++||..+..
T Consensus 77 ~--~~d~vv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-----------~~~~iv~iSS~~~~~ 142 (277)
T PRK06180 77 G--PIDVLVNNAGYGHE-GAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRAR-----------RRGHIVNITSMGGLI 142 (277)
T ss_pred C--CCCEEEECCCccCC-cccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcc-----------CCCEEEEEecccccC
Confidence 6 59999999998754 677788999999999999999999999999999875 467999999999887
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC----------------------------
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN---------------------------- 212 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~---------------------------- 212 (248)
+. +++..|+++|++++.|+++++.++.++|+++++|.||+++|++....
T Consensus 143 ~~---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (277)
T PRK06180 143 TM---PGIGYYCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAREAKSGK 219 (277)
T ss_pred CC---CCcchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHHhhccC
Confidence 76 78899999999999999999999999999999999999999874321
Q ss_pred CCCchhhHHHHHHHHhhhc
Q psy11190 213 APLEVGAATAGIIQFIQSL 231 (248)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~ 231 (248)
...+|+++++.++..+...
T Consensus 220 ~~~~~~dva~~~~~~l~~~ 238 (277)
T PRK06180 220 QPGDPAKAAQAILAAVESD 238 (277)
T ss_pred CCCCHHHHHHHHHHHHcCC
Confidence 1246888888888887654
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-32 Score=227.93 Aligned_cols=226 Identities=22% Similarity=0.257 Sum_probs=191.4
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHH-hhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALA-QQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|++|||||+|+||.++++.|+++| ++|++++|+.++++.+.+.. ....++.++++|++|.++ ++++++++.+.+
T Consensus 13 k~ilItGa~g~IG~~la~~l~~~G----~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~-i~~~~~~~~~~~ 87 (259)
T PRK08213 13 KTALVTGGSRGLGLQIAEALGEAG----ARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEAD-IERLAEETLERF 87 (259)
T ss_pred CEEEEECCCchHHHHHHHHHHHcC----CEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHH-HHHHHHHHHHHh
Confidence 789999999999999999999999 89999999988777664333 334577889999999999 999999998887
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHH-HHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPL-LKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
+ ++|++|||||.... .+..+.+.+.|++.+++|+.+++++++++.+. |.++ +.+++|++||..+.
T Consensus 88 ~--~id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~-----------~~~~~v~~sS~~~~ 153 (259)
T PRK08213 88 G--HVDILVNNAGATWG-APAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPR-----------GYGRIINVASVAGL 153 (259)
T ss_pred C--CCCEEEECCCCCCC-CChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhc-----------CCeEEEEECChhhc
Confidence 6 59999999997654 56667788999999999999999999999998 6653 46799999998877
Q ss_pred ccccCC-CCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC---------------CCchhhHHHH
Q psy11190 160 IEDNTQ-GGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA---------------PLEVGAATAG 223 (248)
Q Consensus 160 ~~~~~~-~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~---------------~~~~~~~~~~ 223 (248)
.+..+. .++..|+++|++++.|+++++.++.++||+++.|.||+++|++..... ..++++++..
T Consensus 154 ~~~~~~~~~~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~ 233 (259)
T PRK08213 154 GGNPPEVMDTIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGTLERLGEDLLAHTPLGRLGDDEDLKGA 233 (259)
T ss_pred cCCCccccCcchHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhhhHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence 655221 345889999999999999999999999999999999999999754321 2368999999
Q ss_pred HHHHhhhcccccccceeeeCCee
Q psy11190 224 IIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 224 ~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
++.+++......+|+.+..+|..
T Consensus 234 ~~~l~~~~~~~~~G~~~~~~~~~ 256 (259)
T PRK08213 234 ALLLASDASKHITGQILAVDGGV 256 (259)
T ss_pred HHHHhCccccCccCCEEEECCCe
Confidence 99988887888899999988753
|
|
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-32 Score=227.98 Aligned_cols=218 Identities=22% Similarity=0.251 Sum_probs=177.1
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCc----hhHHHHHHHH-hhcCCceeEEeeccCCchhhhhHHHHh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNK----DKAVELLALA-QQHSNLHVIELDVTDFSKQQDVLFKDI 76 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~----~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~v~~~~~~i 76 (248)
|+++||||++|||.++|++|+++| ++|++++++. +..+++.+.. ..+.++.++++|+++.++ ++++++++
T Consensus 9 k~vlItGa~~gIG~~~a~~l~~~G----~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~-~~~~~~~~ 83 (257)
T PRK12744 9 KVVLIAGGAKNLGGLIARDLAAQG----AKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAA-VEKLFDDA 83 (257)
T ss_pred cEEEEECCCchHHHHHHHHHHHCC----CcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHH-HHHHHHHH
Confidence 789999999999999999999999 7866665432 2333333222 223478889999999999 99999999
Q ss_pred hhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEe-ec
Q psy11190 77 SDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNV-SS 155 (248)
Q Consensus 77 ~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~v-ss 155 (248)
.+.++ ++|+||||||...+ .++.+.+.+++++.+++|+.+++.+++.++|.|.+ .++++++ ||
T Consensus 84 ~~~~~--~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~-------------~~~iv~~~ss 147 (257)
T PRK12744 84 KAAFG--RPDIAINTVGKVLK-KPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLND-------------NGKIVTLVTS 147 (257)
T ss_pred HHhhC--CCCEEEECCcccCC-CCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhcc-------------CCCEEEEecc
Confidence 88877 59999999998765 66777889999999999999999999999998864 4567766 45
Q ss_pred CCCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC---------------------CC
Q psy11190 156 IMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN---------------------AP 214 (248)
Q Consensus 156 ~~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~---------------------~~ 214 (248)
..+. .. +.+..|+++|++++.|+++++.|+.++||+|++|+||+++|++..+. ..
T Consensus 148 ~~~~-~~---~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (257)
T PRK12744 148 LLGA-FT---PFYSAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGAEAVAYHKTAAALSPFSKTGL 223 (257)
T ss_pred hhcc-cC---CCcccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccccchhhcccccccccccccCCC
Confidence 4443 22 56789999999999999999999999999999999999999875321 12
Q ss_pred CchhhHHHHHHHHhhhcccccccceeeeCCe
Q psy11190 215 LEVGAATAGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
..|++++..++.++++ ....+|+.+..+|.
T Consensus 224 ~~~~dva~~~~~l~~~-~~~~~g~~~~~~gg 253 (257)
T PRK12744 224 TDIEDIVPFIRFLVTD-GWWITGQTILINGG 253 (257)
T ss_pred CCHHHHHHHHHHhhcc-cceeecceEeecCC
Confidence 4689999999998885 55678998888875
|
|
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-32 Score=227.84 Aligned_cols=223 Identities=20% Similarity=0.255 Sum_probs=193.9
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHH-HHhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
+|++|||||+++||++++++|+++| ++|++.+|+.+..+++.+ +.....++.++++|+++.++ ++++++.+.+.
T Consensus 3 ~~~ilItGas~~iG~~la~~l~~~g----~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~~~~ 77 (250)
T TIGR03206 3 DKTAIVTGGGGGIGGATCRRFAEEG----AKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDS-VDTAVAAAEQA 77 (250)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCC----CEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHH-HHHHHHHHHHH
Confidence 4789999999999999999999999 899999999887776643 33334578899999999999 99999999888
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
++ ++|++|||+|.... .++.+.+.+++++.+++|+.+++++++.+++.|.++ +.++++++||..+.
T Consensus 78 ~~--~~d~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----------~~~~ii~iss~~~~ 143 (250)
T TIGR03206 78 LG--PVDVLVNNAGWDKF-GPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVER-----------GAGRIVNIASDAAR 143 (250)
T ss_pred cC--CCCEEEECCCCCCC-CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----------CCeEEEEECchhhc
Confidence 76 59999999998654 666777889999999999999999999999999875 56899999999888
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC---------------------CCCchh
Q psy11190 160 IEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN---------------------APLEVG 218 (248)
Q Consensus 160 ~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~---------------------~~~~~~ 218 (248)
.+. ++...|+.+|++++.|+++++.++.+.|++++.++||+++|++.... ...+++
T Consensus 144 ~~~---~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (250)
T TIGR03206 144 VGS---SGEAVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIPLGRLGQPD 220 (250)
T ss_pred cCC---CCCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcCCccCCcCHH
Confidence 776 77889999999999999999999988899999999999999964321 124799
Q ss_pred hHHHHHHHHhhhcccccccceeeeCCe
Q psy11190 219 AATAGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
++++.++.+++......+|+.+..+|.
T Consensus 221 dva~~~~~l~~~~~~~~~g~~~~~~~g 247 (250)
T TIGR03206 221 DLPGAILFFSSDDASFITGQVLSVSGG 247 (250)
T ss_pred HHHHHHHHHcCcccCCCcCcEEEeCCC
Confidence 999999999988778889999998875
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-32 Score=230.33 Aligned_cols=214 Identities=24% Similarity=0.291 Sum_probs=184.2
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|+++||||+||||++++++|+++| +.|++++|+.+.++++.+.. ..++.++++|++|.++ +..+++.+.+.++
T Consensus 4 k~vlItGasg~iG~~~a~~l~~~g----~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~-~~~~~~~~~~~~~ 76 (275)
T PRK08263 4 KVWFITGASRGFGRAWTEAALERG----DRVVATARDTATLADLAEKY--GDRLLPLALDVTDRAA-VFAAVETAVEHFG 76 (275)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHhc--cCCeeEEEccCCCHHH-HHHHHHHHHHHcC
Confidence 789999999999999999999999 89999999987766654332 3467889999999999 9999999888776
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|++|||||...+ .++.+.+.+++++.+++|+.+++.+++.++|.|+++ +.+++|++||..+..+
T Consensus 77 --~~d~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----------~~~~iv~vsS~~~~~~ 142 (275)
T PRK08263 77 --RLDIVVNNAGYGLF-GMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQ-----------RSGHIIQISSIGGISA 142 (275)
T ss_pred --CCCEEEECCCCccc-cccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----------CCCEEEEEcChhhcCC
Confidence 59999999998765 777888999999999999999999999999999875 4679999999998877
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC------------------------CC-Cc
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN------------------------AP-LE 216 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~------------------------~~-~~ 216 (248)
. ++...|+++|++++.|++.++.++.++||+|+.|.||+++|++.... .. .+
T Consensus 143 ~---~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (275)
T PRK08263 143 F---PMSGIYHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAEQWSERSVDGD 219 (275)
T ss_pred C---CCccHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHHHHHhccCCCC
Confidence 6 77889999999999999999999999999999999999999987321 02 57
Q ss_pred hhhHHHHHHHHhhhcccccccceee
Q psy11190 217 VGAATAGIIQFIQSLGEAHNGGFFE 241 (248)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~g~~~~ 241 (248)
|+++++.++.++... ...+.++.
T Consensus 220 p~dva~~~~~l~~~~--~~~~~~~~ 242 (275)
T PRK08263 220 PEAAAEALLKLVDAE--NPPLRLFL 242 (275)
T ss_pred HHHHHHHHHHHHcCC--CCCeEEEe
Confidence 899999999988763 33444553
|
|
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-32 Score=225.43 Aligned_cols=227 Identities=25% Similarity=0.357 Sum_probs=189.6
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEE-eecCchhHHHHHH-HHhhcCCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFA-TCRNKDKAVELLA-LAQQHSNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~-~~r~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
||+++||||+|+||++++++|+++| ++|++ ..|+.++.++... +...+.++.++++|++|.++ ++++++++.+
T Consensus 1 ~~~~lItGa~g~iG~~l~~~l~~~g----~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~-i~~~~~~~~~ 75 (247)
T PRK09730 1 MAIALVTGGSRGIGRATALLLAQEG----YTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQ-VVAMFTAIDQ 75 (247)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCC----CEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHH-HHHHHHHHHH
Confidence 8999999999999999999999999 88876 4677766665533 33334468889999999999 9999999988
Q ss_pred hhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 79 VVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
.++ ++|+||||||.......+.+.+.++++..+++|+.+++.+++.+++.+.++.. ...+++|++||..+
T Consensus 76 ~~~--~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--------~~~g~~v~~sS~~~ 145 (247)
T PRK09730 76 HDE--PLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHG--------GSGGAIVNVSSAAS 145 (247)
T ss_pred hCC--CCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC--------CCCcEEEEECchhh
Confidence 776 59999999998644456677888999999999999999999999999876421 13578999999988
Q ss_pred cccccCCCC-CccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC----------------CCCchhhHH
Q psy11190 159 SIEDNTQGG-FHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN----------------APLEVGAAT 221 (248)
Q Consensus 159 ~~~~~~~~~-~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~----------------~~~~~~~~~ 221 (248)
..+. ++ +..|+++|++++.+++.++.++.++|++++++.||+++|++.... ...++++++
T Consensus 146 ~~~~---~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva 222 (247)
T PRK09730 146 RLGA---PGEYVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGEPGRVDRVKSNIPMQRGGQPEEVA 222 (247)
T ss_pred ccCC---CCcccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCCCHHHHHHHHhcCCCCCCcCHHHHH
Confidence 7765 43 467999999999999999999998999999999999999975321 123789999
Q ss_pred HHHHHHhhhcccccccceeeeCCe
Q psy11190 222 AGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 222 ~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
+.++.++++.....+|.++.++|.
T Consensus 223 ~~~~~~~~~~~~~~~g~~~~~~g~ 246 (247)
T PRK09730 223 QAIVWLLSDKASYVTGSFIDLAGG 246 (247)
T ss_pred HHHHhhcChhhcCccCcEEecCCC
Confidence 999998887667799999998874
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-32 Score=227.32 Aligned_cols=215 Identities=23% Similarity=0.315 Sum_probs=188.7
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||+++||++++++|+++| ++|++.+|+. ......++.++++|+++.++ ++++++++.+.++
T Consensus 9 k~vlItGas~~iG~~la~~l~~~G----~~v~~~~~~~--------~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~~~ 75 (252)
T PRK08220 9 KTVWVTGAAQGIGYAVALAFVEAG----AKVIGFDQAF--------LTQEDYPFATFVLDVSDAAA-VAQVCQRLLAETG 75 (252)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC----CEEEEEecch--------hhhcCCceEEEEecCCCHHH-HHHHHHHHHHHcC
Confidence 689999999999999999999999 8999999986 11124568899999999999 9999999998887
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|++|||+|.... .++.+.+.+++++.+++|+.+++++++.+++.|+++ +.++|+++||..+..+
T Consensus 76 --~id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----------~~g~iv~~ss~~~~~~ 141 (252)
T PRK08220 76 --PLDVLVNAAGILRM-GATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQ-----------RSGAIVTVGSNAAHVP 141 (252)
T ss_pred --CCCEEEECCCcCCC-CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-----------CCCEEEEECCchhccC
Confidence 59999999998765 677788899999999999999999999999999875 5689999999988766
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC-------------------------CCCc
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN-------------------------APLE 216 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~-------------------------~~~~ 216 (248)
. ++...|+++|++++.|++.++.++.++||+|+.+.||+++|++.... ....
T Consensus 142 ~---~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (252)
T PRK08220 142 R---IGMAAYGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLGIPLGKIAR 218 (252)
T ss_pred C---CCCchhHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhhcCCCcccCC
Confidence 5 77889999999999999999999999999999999999999974321 1346
Q ss_pred hhhHHHHHHHHhhhcccccccceeeeCCee
Q psy11190 217 VGAATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
|+++++.++.++++.....+|+.+..+|..
T Consensus 219 ~~dva~~~~~l~~~~~~~~~g~~i~~~gg~ 248 (252)
T PRK08220 219 PQEIANAVLFLASDLASHITLQDIVVDGGA 248 (252)
T ss_pred HHHHHHHHHHHhcchhcCccCcEEEECCCe
Confidence 899999999999887788999999988853
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-32 Score=225.98 Aligned_cols=206 Identities=19% Similarity=0.270 Sum_probs=178.7
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHH-hh-cCCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALA-QQ-HSNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~-~~-~~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
||+++||||++|||++++++|+++| ++|++++|+.++.++..+.. .. ..++.++++|+++.++ ++++++++.+
T Consensus 1 ~~~vlItGas~giG~~~a~~l~~~G----~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-~~~~~~~~~~ 75 (243)
T PRK07102 1 MKKILIIGATSDIARACARRYAAAG----ARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTAS-HAAFLDSLPA 75 (243)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhcC----CEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHH-HHHHHHHHhh
Confidence 8999999999999999999999999 89999999988776653322 22 3478899999999998 8888887764
Q ss_pred hhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 79 VVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
++|++|||+|.... ....+.+.+++.+.+++|+.+++++++.++|.|.++ +.++++++||..+
T Consensus 76 -----~~d~vv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----------~~~~iv~~sS~~~ 138 (243)
T PRK07102 76 -----LPDIVLIAVGTLGD-QAACEADPALALREFRTNFEGPIALLTLLANRFEAR-----------GSGTIVGISSVAG 138 (243)
T ss_pred -----cCCEEEECCcCCCC-cccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC-----------CCCEEEEEecccc
Confidence 37999999998765 566777889999999999999999999999999875 5789999999988
Q ss_pred cccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC-----CCchhhHHHHHHHHhhhc
Q psy11190 159 SIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA-----PLEVGAATAGIIQFIQSL 231 (248)
Q Consensus 159 ~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~-----~~~~~~~~~~~~~~~~~~ 231 (248)
..+. ++...|+++|+++.+|+++++.++.+.||++++|+||+++|++..... ..+|+++++.++..+...
T Consensus 139 ~~~~---~~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~a~~i~~~~~~~ 213 (243)
T PRK07102 139 DRGR---ASNYVYGSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTAGLKLPGPLTAQPEEVAKDIFRAIEKG 213 (243)
T ss_pred cCCC---CCCcccHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccChhhhccCCCccccCCHHHHHHHHHHHHhCC
Confidence 7776 777899999999999999999999999999999999999999865532 467999999999988764
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-32 Score=229.88 Aligned_cols=208 Identities=26% Similarity=0.325 Sum_probs=178.2
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHH-HHhhcCC-ceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSN-LHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~-~~~~~~~-~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|+++||||++|||++++++|+++| +.|++++|+.+.+++..+ +...+.. ..++++|+++.++ +.++++++.+.
T Consensus 1 k~vlItGas~giG~~la~~la~~G----~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~ 75 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQG----AELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDA-VAAFAADIHAA 75 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHH-HHHHHHHHHHh
Confidence 579999999999999999999999 899999999877766633 3322333 4567899999999 99999999888
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
++ ++|+||||+|.... ..+.+.+.++++..+++|+.+++++++.++|.|.+++ ..++||++||..+.
T Consensus 76 ~~--~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~----------~~g~ii~isS~~~~ 142 (272)
T PRK07832 76 HG--SMDVVMNIAGISAW-GTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAG----------RGGHLVNVSSAAGL 142 (272)
T ss_pred cC--CCCEEEECCCCCCC-CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC----------CCcEEEEEcccccc
Confidence 76 59999999998654 6677889999999999999999999999999997642 35899999999887
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC---------------------CCCchh
Q psy11190 160 IEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN---------------------APLEVG 218 (248)
Q Consensus 160 ~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~---------------------~~~~~~ 218 (248)
.+. +....|+++|+++.+|+++++.|+.++||+|+.|+||+++|++.+.. ...+|+
T Consensus 143 ~~~---~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (272)
T PRK07832 143 VAL---PWHAAYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVDRFRGHAVTPE 219 (272)
T ss_pred CCC---CCCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHHHHhcccCCCCHH
Confidence 665 77889999999999999999999999999999999999999975421 136899
Q ss_pred hHHHHHHHHhhh
Q psy11190 219 AATAGIIQFIQS 230 (248)
Q Consensus 219 ~~~~~~~~~~~~ 230 (248)
++++.++..+..
T Consensus 220 ~vA~~~~~~~~~ 231 (272)
T PRK07832 220 KAAEKILAGVEK 231 (272)
T ss_pred HHHHHHHHHHhc
Confidence 999999999964
|
|
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-32 Score=225.05 Aligned_cols=209 Identities=27% Similarity=0.413 Sum_probs=177.7
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|+++||||++|||++++++|+++| ++|++++|+.... ...++.++++|+++. ++++.+.++
T Consensus 6 k~~lVtGas~~iG~~ia~~l~~~G----~~v~~~~r~~~~~--------~~~~~~~~~~D~~~~-------~~~~~~~~~ 66 (235)
T PRK06550 6 KTVLITGAASGIGLAQARAFLAQG----AQVYGVDKQDKPD--------LSGNFHFLQLDLSDD-------LEPLFDWVP 66 (235)
T ss_pred CEEEEcCCCchHHHHHHHHHHHCC----CEEEEEeCCcccc--------cCCcEEEEECChHHH-------HHHHHHhhC
Confidence 789999999999999999999999 8999999985431 134677889999875 233334444
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+||||||......++.+.+.+++++.+++|+.+++++++.++|.+.++ +.++|+++||..+..+
T Consensus 67 --~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----------~~~~iv~~sS~~~~~~ 133 (235)
T PRK06550 67 --SVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLER-----------KSGIIINMCSIASFVA 133 (235)
T ss_pred --CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----------CCcEEEEEcChhhccC
Confidence 599999999976433566778899999999999999999999999999875 5689999999998877
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC-----------------CCchhhHHHHH
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA-----------------PLEVGAATAGI 224 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~-----------------~~~~~~~~~~~ 224 (248)
. ++...|+++|++++.|+++++.++.++||+|++|.||+++|++..... ..+|++++..+
T Consensus 134 ~---~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 210 (235)
T PRK06550 134 G---GGGAAYTASKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFEPGGLADWVARETPIKRWAEPEEVAELT 210 (235)
T ss_pred C---CCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCcccccccCchHHHHHHhccCCcCCCCCHHHHHHHH
Confidence 6 778899999999999999999999999999999999999999864311 24799999999
Q ss_pred HHHhhhcccccccceeeeCCe
Q psy11190 225 IQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 225 ~~~~~~~~~~~~g~~~~~~g~ 245 (248)
++++++.....+|+++.++|.
T Consensus 211 ~~l~s~~~~~~~g~~~~~~gg 231 (235)
T PRK06550 211 LFLASGKADYMQGTIVPIDGG 231 (235)
T ss_pred HHHcChhhccCCCcEEEECCc
Confidence 999988778899999999985
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-32 Score=223.97 Aligned_cols=221 Identities=24% Similarity=0.327 Sum_probs=189.0
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhh--cCCceeEEeecc--CCchhhhhHHHHhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQ--HSNLHVIELDVT--DFSKQQDVLFKDIS 77 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~--~~~~~v~~~~~~i~ 77 (248)
|+++||||+++||.+++++|+++| ++|++++|+.++++++.+.... ..++.++.+|++ +.++ ++.+++.+.
T Consensus 13 k~vlItG~~g~iG~~la~~l~~~G----~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~-~~~~~~~~~ 87 (247)
T PRK08945 13 RIILVTGAGDGIGREAALTYARHG----ATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQN-YQQLADTIE 87 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC----CcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHH-HHHHHHHHH
Confidence 789999999999999999999999 8999999998877766433322 235778888886 5666 888989998
Q ss_pred hhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCC
Q psy11190 78 DVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIM 157 (248)
Q Consensus 78 ~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~ 157 (248)
+.++ ++|+||||||...+..++.+.+.+.+++.+++|+.+++++++.+++.|.++ +.++|+++||..
T Consensus 88 ~~~~--~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~-----------~~~~iv~~ss~~ 154 (247)
T PRK08945 88 EQFG--RLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKS-----------PAASLVFTSSSV 154 (247)
T ss_pred HHhC--CCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhC-----------CCCEEEEEccHh
Confidence 8876 599999999987554567778889999999999999999999999999875 578999999998
Q ss_pred CcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC-------CCCchhhHHHHHHHHhhh
Q psy11190 158 GSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN-------APLEVGAATAGIIQFIQS 230 (248)
Q Consensus 158 ~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~-------~~~~~~~~~~~~~~~~~~ 230 (248)
+..+. +++..|+++|++++.|++.++.++..+||++++++||+++|++.... ...+|+++++.++++++.
T Consensus 155 ~~~~~---~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (247)
T PRK08945 155 GRQGR---ANWGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRASAFPGEDPQKLKTPEDIMPLYLYLMGD 231 (247)
T ss_pred hcCCC---CCCcccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhhhcCcccccCCCCHHHHHHHHHHHhCc
Confidence 88776 77889999999999999999999999999999999999999974322 246789999999999888
Q ss_pred cccccccceeeeC
Q psy11190 231 LGEAHNGGFFEYT 243 (248)
Q Consensus 231 ~~~~~~g~~~~~~ 243 (248)
.....+|+++..+
T Consensus 232 ~~~~~~g~~~~~~ 244 (247)
T PRK08945 232 DSRRKNGQSFDAQ 244 (247)
T ss_pred cccccCCeEEeCC
Confidence 7778899887643
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-32 Score=227.49 Aligned_cols=207 Identities=29% Similarity=0.425 Sum_probs=181.3
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|+++||||+||||++++++|+++| ++|++++|+.++++++........++.++++|++|.++ ++.+++.+.+ ++
T Consensus 6 ~~vlItG~s~~iG~~ia~~l~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~-~~~~~~~~~~-~~ 79 (263)
T PRK09072 6 KRVLLTGASGGIGQALAEALAAAG----ARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAG-REAVLARARE-MG 79 (263)
T ss_pred CEEEEECCCchHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHH-HHHHHHHHHh-cC
Confidence 689999999999999999999999 89999999988877764443445578899999999999 9999988876 44
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+||||||.... .++.+.+.+++++.+++|+.+++++++.+++.|.++ +.++++++||..+..+
T Consensus 80 --~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-----------~~~~iv~isS~~~~~~ 145 (263)
T PRK09072 80 --GINVLINNAGVNHF-ALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQ-----------PSAMVVNVGSTFGSIG 145 (263)
T ss_pred --CCCEEEECCCCCCc-cccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-----------CCCEEEEecChhhCcC
Confidence 59999999998654 667788999999999999999999999999999874 4689999999988877
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC----------CCCchhhHHHHHHHHhhhc
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN----------APLEVGAATAGIIQFIQSL 231 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~----------~~~~~~~~~~~~~~~~~~~ 231 (248)
. ++...|+++|+++.+|+++++.++.++||+|++|+||+++|++.... ...+++++++.++..+...
T Consensus 146 ~---~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~va~~i~~~~~~~ 222 (263)
T PRK09072 146 Y---PGYASYCASKFALRGFSEALRRELADTGVRVLYLAPRATRTAMNSEAVQALNRALGNAMDDPEDVAAAVLQAIEKE 222 (263)
T ss_pred C---CCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccccchhhhcccccccccCCCCCHHHHHHHHHHHHhCC
Confidence 6 77889999999999999999999999999999999999999975431 2458999999999999764
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-32 Score=229.66 Aligned_cols=213 Identities=23% Similarity=0.280 Sum_probs=178.2
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHH-HHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|++|||||+||||++++++|+++| ++|++++|+.+.+++..+ +...+.++.++++|++|.++ ++.+++.+.+.+
T Consensus 7 k~vlVtGasggIG~~la~~l~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~-~~~~~~~~~~~~ 81 (287)
T PRK06194 7 KVAVITGAASGFGLAFARIGAALG----MKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQ-VEALADAALERF 81 (287)
T ss_pred CEEEEeCCccHHHHHHHHHHHHCC----CEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHH-HHHHHHHHHHHc
Confidence 789999999999999999999999 899999999877776643 33334578889999999998 999999998887
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+ ++|+||||||...+ .++.+.+.++++..+++|+.++++++++++|.|.++.... ....++||++||..+..
T Consensus 82 g--~id~vi~~Ag~~~~-~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~-----~~~~g~iv~~sS~~~~~ 153 (287)
T PRK06194 82 G--AVHLLFNNAGVGAG-GLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKD-----PAYEGHIVNTASMAGLL 153 (287)
T ss_pred C--CCCEEEECCCCCCC-CCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCC-----CCCCeEEEEeCChhhcc
Confidence 7 59999999998765 6677789999999999999999999999999998753100 00127999999999987
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhcc--CCCeEEEEecCcceecCCCCCCC-------------------------
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLK--GDKIIATAMHPGWVKTDMGGSNA------------------------- 213 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~--~~~i~v~~v~PG~v~t~~~~~~~------------------------- 213 (248)
+. ++...|+++|++++.|+++++.++. ..+||++.++||+++|++.....
T Consensus 154 ~~---~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (287)
T PRK06194 154 AP---PAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQSERNRPADLANTAPPTRSQLIAQAMSQK 230 (287)
T ss_pred CC---CCCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccccccccCchhcccCccccchhhHHHHHHHh
Confidence 76 7788999999999999999999987 45799999999999999853311
Q ss_pred -----CCchhhHHHHHHHHhhh
Q psy11190 214 -----PLEVGAATAGIIQFIQS 230 (248)
Q Consensus 214 -----~~~~~~~~~~~~~~~~~ 230 (248)
..+++++++.++..+..
T Consensus 231 ~~~~~~~s~~dva~~i~~~~~~ 252 (287)
T PRK06194 231 AVGSGKVTAEEVAQLVFDAIRA 252 (287)
T ss_pred hhhccCCCHHHHHHHHHHHHHc
Confidence 24788888888887743
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-32 Score=223.32 Aligned_cols=221 Identities=22% Similarity=0.243 Sum_probs=186.8
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHH-hhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALA-QQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|+++||||+++||++++++|+++| ++|++++|+.+..+.+.+.. ....++.++.+|+++.++ ++.+++++.+.+
T Consensus 7 k~vlItGasg~iG~~la~~l~~~g----~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-~~~~~~~~~~~~ 81 (250)
T PRK07774 7 KVAIVTGAAGGIGQAYAEALAREG----ASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDS-AKAMADATVSAF 81 (250)
T ss_pred CEEEEECCCchHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHH-HHHHHHHHHHHh
Confidence 789999999999999999999999 89999999987766664333 223467889999999999 999999999888
Q ss_pred cCCCccEEEeccccCCc--cccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 81 KDQGLNVLVNNAGIAAK--FTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
+ ++|+||||||.... ..++.+.+.+++++.+++|+.+++++++.+++.+.+. +.++|+++||..+
T Consensus 82 ~--~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----------~~~~iv~~sS~~~ 148 (250)
T PRK07774 82 G--GIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKR-----------GGGAIVNQSSTAA 148 (250)
T ss_pred C--CCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHh-----------CCcEEEEEecccc
Confidence 7 59999999998642 2455677889999999999999999999999999875 4689999999876
Q ss_pred cccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC----------------CCchhhHHH
Q psy11190 159 SIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA----------------PLEVGAATA 222 (248)
Q Consensus 159 ~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~----------------~~~~~~~~~ 222 (248)
. .+...|+++|++++.|++++++++.+.||+++.++||+++|++..... ..+++++++
T Consensus 149 ~------~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~ 222 (250)
T PRK07774 149 W------LYSNFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVTPKEFVADMVKGIPLSRMGTPEDLVG 222 (250)
T ss_pred c------CCccccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccCCHHHHHHHHhcCCCCCCcCHHHHHH
Confidence 4 345689999999999999999999989999999999999999865321 236889999
Q ss_pred HHHHHhhhcccccccceeeeCCee
Q psy11190 223 GIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 223 ~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
.++..+.......+|+.|.++|..
T Consensus 223 ~~~~~~~~~~~~~~g~~~~v~~g~ 246 (250)
T PRK07774 223 MCLFLLSDEASWITGQIFNVDGGQ 246 (250)
T ss_pred HHHHHhChhhhCcCCCEEEECCCe
Confidence 998888776556788888887753
|
|
| >KOG1208|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-32 Score=231.97 Aligned_cols=218 Identities=30% Similarity=0.419 Sum_probs=179.9
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhh---cCCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQ---HSNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
++++|||+++|||+++|++|+++| ++|++.+||.++.++..+.+.. ..++.++++|+++.++ |+++.+++.+
T Consensus 36 ~~~vVTGansGIG~eta~~La~~G----a~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~S-V~~fa~~~~~ 110 (314)
T KOG1208|consen 36 KVALVTGATSGIGFETARELALRG----AHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKS-VRKFAEEFKK 110 (314)
T ss_pred cEEEEECCCCchHHHHHHHHHhCC----CEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHH-HHHHHHHHHh
Confidence 689999999999999999999999 9999999999888888554443 3368889999999999 9999999998
Q ss_pred hhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 79 VVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
..+ ++|+||||||+..+.. ..+.|.++.+|.+|+.|+|++++.++|.|+.+ ..+|||++||...
T Consensus 111 ~~~--~ldvLInNAGV~~~~~---~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s-----------~~~RIV~vsS~~~ 174 (314)
T KOG1208|consen 111 KEG--PLDVLINNAGVMAPPF---SLTKDGLELTFATNYLGHFLLTELLLPLLKRS-----------APSRIVNVSSILG 174 (314)
T ss_pred cCC--CccEEEeCcccccCCc---ccCccchhheehhhhHHHHHHHHHHHHHHhhC-----------CCCCEEEEcCccc
Confidence 776 6999999999986522 66778999999999999999999999999986 3499999999886
Q ss_pred ccc----c---cC---CCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecC-CCCCCC-------------C
Q psy11190 159 SIE----D---NT---QGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTD-MGGSNA-------------P 214 (248)
Q Consensus 159 ~~~----~---~~---~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~-~~~~~~-------------~ 214 (248)
... . .. +.....|+.||.+...+++.|++.+.. ||.+++++||.+.|+ +.+... .
T Consensus 175 ~~~~~~~~l~~~~~~~~~~~~~Y~~SKla~~l~~~eL~k~l~~-~V~~~~~hPG~v~t~~l~r~~~~~~~l~~~l~~~~~ 253 (314)
T KOG1208|consen 175 GGKIDLKDLSGEKAKLYSSDAAYALSKLANVLLANELAKRLKK-GVTTYSVHPGVVKTTGLSRVNLLLRLLAKKLSWPLT 253 (314)
T ss_pred cCccchhhccchhccCccchhHHHHhHHHHHHHHHHHHHHhhc-CceEEEECCCcccccceecchHHHHHHHHHHHHHhc
Confidence 110 0 00 223335999999999999999999988 999999999999999 555111 2
Q ss_pred CchhhHHHHHHHHhhhcc-cccccceee
Q psy11190 215 LEVGAATAGIIQFIQSLG-EAHNGGFFE 241 (248)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~-~~~~g~~~~ 241 (248)
.++++.++.++..+..++ ...+|.++.
T Consensus 254 ks~~~ga~t~~~~a~~p~~~~~sg~y~~ 281 (314)
T KOG1208|consen 254 KSPEQGAATTCYAALSPELEGVSGKYFE 281 (314)
T ss_pred cCHHHHhhheehhccCccccCccccccc
Confidence 367888888887776654 456777755
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-32 Score=224.37 Aligned_cols=229 Identities=24% Similarity=0.303 Sum_probs=188.9
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCch-hHHHHHH-HHhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKD-KAVELLA-LAQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~-~~~~~~~-~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|+++||||+++||.+++++|+++| ++|++++|+.. ...+..+ +.....++.++++|+++.++ +.++++.+.+.
T Consensus 3 k~vlItG~sg~iG~~la~~L~~~g----~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~ 77 (256)
T PRK12745 3 PVALVTGGRRGIGLGIARALAAAG----FDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSA-HEAMLDAAQAA 77 (256)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCC----CEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHH-HHHHHHHHHHh
Confidence 789999999999999999999999 89999998753 3333322 22234578899999999999 99999999988
Q ss_pred hcCCCccEEEeccccCCc-cccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 80 VKDQGLNVLVNNAGIAAK-FTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
++ ++|++|||||...+ ..++.+.+.+++++.+++|+.+++++++.+++.|.++.... ....++|+++||..+
T Consensus 78 ~~--~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~-----~~~~~~iv~~sS~~~ 150 (256)
T PRK12745 78 WG--RIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPE-----ELPHRSIVFVSSVNA 150 (256)
T ss_pred cC--CCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcC-----CCCCcEEEEECChhh
Confidence 77 59999999997643 24567788899999999999999999999999998753110 001467999999998
Q ss_pred cccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC----------------CCchhhHHH
Q psy11190 159 SIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA----------------PLEVGAATA 222 (248)
Q Consensus 159 ~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~----------------~~~~~~~~~ 222 (248)
..+. .+...|+++|+++++|++.++.++.++||+++.|.||+++|++..... ...++++++
T Consensus 151 ~~~~---~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~ 227 (256)
T PRK12745 151 IMVS---PNRGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPVTAKYDALIAKGLVPMPRWGEPEDVAR 227 (256)
T ss_pred ccCC---CCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccccchhHHhhhhhcCCCcCCCcCHHHHHH
Confidence 8776 777899999999999999999999999999999999999999764311 236899999
Q ss_pred HHHHHhhhcccccccceeeeCCe
Q psy11190 223 GIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 223 ~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
.+..++.......+|.++.++|.
T Consensus 228 ~i~~l~~~~~~~~~G~~~~i~gg 250 (256)
T PRK12745 228 AVAALASGDLPYSTGQAIHVDGG 250 (256)
T ss_pred HHHHHhCCcccccCCCEEEECCC
Confidence 99988877666788999999885
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-32 Score=224.38 Aligned_cols=222 Identities=23% Similarity=0.399 Sum_probs=187.9
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeec-CchhHHHHH-HHHhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCR-NKDKAVELL-ALAQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r-~~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|+++||||+||||.+++++|+++| ++|++..+ +.+..+++. ++...+.++.++++|+++.++ +..+++++.+.
T Consensus 7 ~~~lItG~s~~iG~~la~~l~~~g----~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~ 81 (247)
T PRK12935 7 KVAIVTGGAKGIGKAITVALAQEG----AKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVED-ANRLVEEAVNH 81 (247)
T ss_pred CEEEEECCCCHHHHHHHHHHHHcC----CEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHH-HHHHHHHHHHH
Confidence 689999999999999999999999 78877644 445555553 333334578899999999999 99999999998
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
++ ++|+||||||...+ ..+.+.+.+.+++.+++|+.+++++++.++|.|.++ +.+++|++||..+.
T Consensus 82 ~~--~id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----------~~~~iv~~sS~~~~ 147 (247)
T PRK12935 82 FG--KVDILVNNAGITRD-RTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEA-----------EEGRIISISSIIGQ 147 (247)
T ss_pred cC--CCCEEEECCCCCCC-CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----------CCcEEEEEcchhhc
Confidence 87 59999999998765 566777889999999999999999999999999864 46799999999888
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC---------------CCchhhHHHHH
Q psy11190 160 IEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA---------------PLEVGAATAGI 224 (248)
Q Consensus 160 ~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~---------------~~~~~~~~~~~ 224 (248)
.+. +++..|+++|+++++|+++++.++.+.||+++.|.||+++|++..... ...|+++++.+
T Consensus 148 ~~~---~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~ 224 (247)
T PRK12935 148 AGG---FGQTNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEVPEEVRQKIVAKIPKKRFGQADEIAKGV 224 (247)
T ss_pred CCC---CCCcchHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhccHHHHHHHHHhCCCCCCcCHHHHHHHH
Confidence 776 778899999999999999999999989999999999999998754321 35799999999
Q ss_pred HHHhhhcccccccceeeeCCee
Q psy11190 225 IQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 225 ~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
+.+++. ....+|..+.++|..
T Consensus 225 ~~~~~~-~~~~~g~~~~i~~g~ 245 (247)
T PRK12935 225 VYLCRD-GAYITGQQLNINGGL 245 (247)
T ss_pred HHHcCc-ccCccCCEEEeCCCc
Confidence 998865 345788888888763
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-32 Score=223.50 Aligned_cols=214 Identities=22% Similarity=0.307 Sum_probs=181.5
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhcC
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVKD 82 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~~ 82 (248)
+++||||+||||.+++++|+++| ++|++++|+.++++++.... ..++.++++|+++.++ ++.+++++.+.++
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G----~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~-i~~~~~~~~~~~~- 73 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQG----HKVIATGRRQERLQELKDEL--GDNLYIAQLDVRNRAA-IEEMLASLPAEWR- 73 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHHh--ccceEEEEecCCCHHH-HHHHHHHHHHHcC-
Confidence 69999999999999999999999 89999999988776654333 3468889999999999 9999999988876
Q ss_pred CCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcccc
Q psy11190 83 QGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIED 162 (248)
Q Consensus 83 ~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~~ 162 (248)
++|++|||||......++.+.+.+++++.+++|+.+++.+++.++|.|.++ +.+++|++||..+..+.
T Consensus 74 -~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----------~~~~iv~isS~~~~~~~ 141 (248)
T PRK10538 74 -NIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVER-----------NHGHIINIGSTAGSWPY 141 (248)
T ss_pred -CCCEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----------CCcEEEEECCcccCCCC
Confidence 599999999976433456677899999999999999999999999999875 56899999999887766
Q ss_pred cCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCC-C---------------CCCCCchhhHHHHHHH
Q psy11190 163 NTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMG-G---------------SNAPLEVGAATAGIIQ 226 (248)
Q Consensus 163 ~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~-~---------------~~~~~~~~~~~~~~~~ 226 (248)
++...|+++|+++++|++.++.++.+++|++++|.||++.|++. . ...+.+|+++++.+++
T Consensus 142 ---~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~ 218 (248)
T PRK10538 142 ---AGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAVWW 218 (248)
T ss_pred ---CCCchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccccchhhccCcHHHHHhhccccCCCCHHHHHHHHHH
Confidence 77889999999999999999999999999999999999984432 1 0124689999999999
Q ss_pred Hhhhcccccccce
Q psy11190 227 FIQSLGEAHNGGF 239 (248)
Q Consensus 227 ~~~~~~~~~~g~~ 239 (248)
+++.+.....+.+
T Consensus 219 l~~~~~~~~~~~~ 231 (248)
T PRK10538 219 VATLPAHVNINTL 231 (248)
T ss_pred HhcCCCcccchhh
Confidence 9987655544444
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-32 Score=224.03 Aligned_cols=209 Identities=24% Similarity=0.360 Sum_probs=181.2
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHH-Hhh--cCCceeEEeeccCCchhhhhHHHHhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLAL-AQQ--HSNLHVIELDVTDFSKQQDVLFKDIS 77 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~-~~~--~~~~~~~~~D~~~~~~~v~~~~~~i~ 77 (248)
+|+++||||++|||++++++|+++| ++|++.+|+.++.+++... ... +.++.++++|+++.++ +..+++++.
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g----~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~ 76 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKG----RDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQ-VFEVFAEFR 76 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcC----CEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHH-HHHHHHHHH
Confidence 3799999999999999999999999 8999999998887776433 222 3468899999999999 999999999
Q ss_pred hhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCC
Q psy11190 78 DVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIM 157 (248)
Q Consensus 78 ~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~ 157 (248)
+.++ ++|++|||||+..+ ..+.+.+.+.+++.+++|+.+++.+++.+++.+++. +.++||++||..
T Consensus 77 ~~~~--~id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----------~~~~iv~~sS~~ 142 (248)
T PRK08251 77 DELG--GLDRVIVNAGIGKG-ARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQ-----------GSGHLVLISSVS 142 (248)
T ss_pred HHcC--CCCEEEECCCcCCC-CCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----------CCCeEEEEeccc
Confidence 8887 59999999998765 666677888999999999999999999999999875 567999999998
Q ss_pred CcccccCCCC-CccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC----CCchhhHHHHHHHHhhhc
Q psy11190 158 GSIEDNTQGG-FHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA----PLEVGAATAGIIQFIQSL 231 (248)
Q Consensus 158 ~~~~~~~~~~-~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~ 231 (248)
+..+. ++ ...|+.+|++++.+++.++.++...||++++|+||+++|++.+... ..++++.++.++..+...
T Consensus 143 ~~~~~---~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~a~~i~~~~~~~ 218 (248)
T PRK08251 143 AVRGL---PGVKAAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKAKSTPFMVDTETGVKALVKAIEKE 218 (248)
T ss_pred cccCC---CCCcccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhhccccCCccCCHHHHHHHHHHHHhcC
Confidence 87765 43 6789999999999999999999988999999999999999875432 467999999999988763
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-32 Score=232.56 Aligned_cols=227 Identities=21% Similarity=0.273 Sum_probs=178.8
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHh-hcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQ-QHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
+|+++||||++|||++++++|+++| ++|++++|+.++++++.+... ...++.++++|++|.++ ++.+++++.+.
T Consensus 6 ~k~vlVTGas~gIG~~~a~~L~~~G----~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~-v~~~~~~~~~~ 80 (322)
T PRK07453 6 KGTVIITGASSGVGLYAAKALAKRG----WHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDS-VRRFVDDFRAL 80 (322)
T ss_pred CCEEEEEcCCChHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHH-HHHHHHHHHHh
Confidence 4789999999999999999999999 899999999888777644332 23468899999999999 99999888766
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
.+ ++|+||||||+..+.....+.+.++++..+++|+.+++++++.++|.|++++. +.++||++||....
T Consensus 81 ~~--~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~---------~~~riV~vsS~~~~ 149 (322)
T PRK07453 81 GK--PLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPA---------PDPRLVILGTVTAN 149 (322)
T ss_pred CC--CccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCC---------CCceEEEEcccccC
Confidence 54 59999999998644233346688999999999999999999999999987521 13699999997653
Q ss_pred ccc--------------------------------cCCCCCccchhhHHHHHHHHHHHHhhcc-CCCeEEEEecCcce-e
Q psy11190 160 IED--------------------------------NTQGGFHPYRCSKAALNAATRSLSIDLK-GDKIIATAMHPGWV-K 205 (248)
Q Consensus 160 ~~~--------------------------------~~~~~~~~y~~sK~a~~~~~~~la~e~~-~~~i~v~~v~PG~v-~ 205 (248)
... .++.++..|+.||.+...|++.+++++. .+||+|++++||+| .
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~ 229 (322)
T PRK07453 150 PKELGGKIPIPAPADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVAD 229 (322)
T ss_pred ccccCCccCCCCccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccC
Confidence 210 0123456899999999999999999995 46999999999999 5
Q ss_pred cCCCCCCC-----------------CCchhhHHHHHHHHhhhcccccccceeeeC
Q psy11190 206 TDMGGSNA-----------------PLEVGAATAGIIQFIQSLGEAHNGGFFEYT 243 (248)
Q Consensus 206 t~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 243 (248)
|++.+... ..++++.+..++..+.++....+|.||.++
T Consensus 230 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~~~ 284 (322)
T PRK07453 230 TPLFRNTPPLFQKLFPWFQKNITGGYVSQELAGERVAQVVADPEFAQSGVHWSWG 284 (322)
T ss_pred CcccccCCHHHHHHHHHHHHHHhhceecHHHHhhHHHHhhcCcccCCCCceeecC
Confidence 88865422 135566666666666555556799999864
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-32 Score=227.90 Aligned_cols=201 Identities=24% Similarity=0.350 Sum_probs=176.6
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|+++||||+||||++++++|+++| ++|++.+|+.++.+. ..++.++++|++|.++ ++.+++.+.+.++
T Consensus 5 ~~vlVtGasg~iG~~~a~~l~~~g----~~V~~~~r~~~~~~~-------~~~~~~~~~D~~d~~~-~~~~~~~~~~~~g 72 (270)
T PRK06179 5 KVALVTGASSGIGRATAEKLARAG----YRVFGTSRNPARAAP-------IPGVELLELDVTDDAS-VQAAVDEVIARAG 72 (270)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCC----CEEEEEeCChhhccc-------cCCCeeEEeecCCHHH-HHHHHHHHHHhCC
Confidence 689999999999999999999999 899999998765432 2367899999999999 9999999998887
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+||||||.... ..+.+.+.+++++.+++|+.+++++++.++|.|.++ +.++||++||..+..+
T Consensus 73 --~~d~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-----------~~~~iv~isS~~~~~~ 138 (270)
T PRK06179 73 --RIDVLVNNAGVGLA-GAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQ-----------GSGRIINISSVLGFLP 138 (270)
T ss_pred --CCCEEEECCCCCCC-cCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----------CCceEEEECCccccCC
Confidence 59999999998765 677788999999999999999999999999999875 5789999999998877
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC--------------------------CC
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA--------------------------PL 215 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~--------------------------~~ 215 (248)
. +....|+++|++++.|++.++.|++++||++++|+||+++|++..... ..
T Consensus 139 ~---~~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (270)
T PRK06179 139 A---PYMALYAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEYDRERAVVSKAVAKAVKKAD 215 (270)
T ss_pred C---CCccHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccccccccCCCCCcchhhHHHHHHHHHHHHhccccCC
Confidence 6 777899999999999999999999999999999999999999864321 24
Q ss_pred chhhHHHHHHHHhhhc
Q psy11190 216 EVGAATAGIIQFIQSL 231 (248)
Q Consensus 216 ~~~~~~~~~~~~~~~~ 231 (248)
+|+++++.++..+...
T Consensus 216 ~~~~va~~~~~~~~~~ 231 (270)
T PRK06179 216 APEVVADTVVKAALGP 231 (270)
T ss_pred CHHHHHHHHHHHHcCC
Confidence 6788888888888664
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-32 Score=223.16 Aligned_cols=223 Identities=26% Similarity=0.337 Sum_probs=194.4
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEe-ecCchhHHHHHH-HHhhcCCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFAT-CRNKDKAVELLA-LAQQHSNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~-~r~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
||++|||||+++||++++++|+++| ++|+++ +|+.++.+++.+ +.....++.++++|+++.++ ++++++.+.+
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~~g----~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~ 79 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAKEG----AKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEED-VENLVEQIVE 79 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCC----CEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHH-HHHHHHHHHH
Confidence 4799999999999999999999999 899998 998877666633 33334568899999999999 9999999888
Q ss_pred hhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 79 VVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
.++ ++|+|||++|.... ..+.+.+.+++++.+++|+.+++++++.+++.+.++ +.+++|++||..+
T Consensus 80 ~~~--~id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----------~~~~~v~~sS~~~ 145 (247)
T PRK05565 80 KFG--KIDILVNNAGISNF-GLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKR-----------KSGVIVNISSIWG 145 (247)
T ss_pred HhC--CCCEEEECCCcCCC-CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----------CCcEEEEECCHhh
Confidence 776 59999999998743 667778899999999999999999999999999875 5688999999988
Q ss_pred cccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC---------------CCchhhHHHH
Q psy11190 159 SIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA---------------PLEVGAATAG 223 (248)
Q Consensus 159 ~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~---------------~~~~~~~~~~ 223 (248)
..+. +....|+.+|++++.|++.++.++.++|+++++|+||+++|++.+... ..+++++++.
T Consensus 146 ~~~~---~~~~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~ 222 (247)
T PRK05565 146 LIGA---SCEVLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFSEEDKEGLAEEIPLGRLGKPEEIAKV 222 (247)
T ss_pred ccCC---CCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccChHHHHHHHhcCCCCCCCCHHHHHHH
Confidence 8776 677889999999999999999999989999999999999998765432 2478999999
Q ss_pred HHHHhhhcccccccceeeeCCe
Q psy11190 224 IIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 224 ~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
++.+++......+|+++.+++.
T Consensus 223 ~~~l~~~~~~~~~g~~~~~~~~ 244 (247)
T PRK05565 223 VLFLASDDASYITGQIITVDGG 244 (247)
T ss_pred HHHHcCCccCCccCcEEEecCC
Confidence 9999988888899999999875
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-31 Score=225.77 Aligned_cols=223 Identities=20% Similarity=0.237 Sum_probs=190.4
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhh---cCCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQ---HSNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
|++||||++|+||.+++++|+++| ++|++++|+.++.+...+.... ..++.++++|++|.++ ++.+++++.+
T Consensus 8 k~vlItGasg~IG~~la~~l~~~G----~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~-~~~~~~~~~~ 82 (276)
T PRK05875 8 RTYLVTGGGSGIGKGVAAGLVAAG----AAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQ-VARAVDAATA 82 (276)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC----CeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHH-HHHHHHHHHH
Confidence 789999999999999999999999 8999999998776665333221 2467889999999998 9999999988
Q ss_pred hhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 79 VVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
.++ ++|++|||||......++.+.+.++++..+++|+.+++.+++.+++.|.++ +.++|+++||..+
T Consensus 83 ~~~--~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----------~~g~iv~~sS~~~ 149 (276)
T PRK05875 83 WHG--RLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRG-----------GGGSFVGISSIAA 149 (276)
T ss_pred HcC--CCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----------CCcEEEEEechhh
Confidence 877 599999999976443566778889999999999999999999999998764 4689999999988
Q ss_pred cccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC-----------------CCchhhHH
Q psy11190 159 SIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA-----------------PLEVGAAT 221 (248)
Q Consensus 159 ~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~-----------------~~~~~~~~ 221 (248)
..+. ++...|+++|++++.+++.++.++.+.+|+++.|.||+++|++..... ...+++++
T Consensus 150 ~~~~---~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva 226 (276)
T PRK05875 150 SNTH---RWFGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITESPELSADYRACTPLPRVGEVEDVA 226 (276)
T ss_pred cCCC---CCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCccccccccCHHHHHHHHcCCCCCCCcCHHHHH
Confidence 7665 667899999999999999999999999999999999999999764311 13579999
Q ss_pred HHHHHHhhhcccccccceeeeCCe
Q psy11190 222 AGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 222 ~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
..++.+++......+|+++..+|.
T Consensus 227 ~~~~~l~~~~~~~~~g~~~~~~~g 250 (276)
T PRK05875 227 NLAMFLLSDAASWITGQVINVDGG 250 (276)
T ss_pred HHHHHHcCchhcCcCCCEEEECCC
Confidence 999999988777778998888764
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-32 Score=223.07 Aligned_cols=201 Identities=26% Similarity=0.303 Sum_probs=172.1
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|++++||||++|||++++++|+++| ++|++++|+.++++++.+ ...++.++++|+++.++ ++.+++++..
T Consensus 1 ~~~vlItGas~giG~~la~~L~~~G----~~V~~~~r~~~~~~~~~~---~~~~~~~~~~D~~~~~~-~~~~~~~~~~-- 70 (240)
T PRK06101 1 MTAVLITGATSGIGKQLALDYAKQG----WQVIACGRNQSVLDELHT---QSANIFTLAFDVTDHPG-TKAALSQLPF-- 70 (240)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhCC----CEEEEEECCHHHHHHHHH---hcCCCeEEEeeCCCHHH-HHHHHHhccc--
Confidence 7899999999999999999999999 899999999876655433 23468899999999998 8888777653
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
.+|.+|||||.... ....+.+.+++++.+++|+.+++++++.++|.|.+ .++++++||..+..
T Consensus 71 ---~~d~~i~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-------------~~~iv~isS~~~~~ 133 (240)
T PRK06101 71 ---IPELWIFNAGDCEY-MDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSC-------------GHRVVIVGSIASEL 133 (240)
T ss_pred ---CCCEEEEcCccccc-CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhc-------------CCeEEEEechhhcc
Confidence 38999999986533 33445788999999999999999999999999853 46899999998887
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC-----CCchhhHHHHHHHHhhhc
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA-----PLEVGAATAGIIQFIQSL 231 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~-----~~~~~~~~~~~~~~~~~~ 231 (248)
+. ++...|+++|+++++|++.++.|+.++||++++|.||+++|++..... ..+++++++.++..+...
T Consensus 134 ~~---~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~~~~~~~~~~~~~~~a~~i~~~i~~~ 206 (240)
T PRK06101 134 AL---PRAEAYGASKAAVAYFARTLQLDLRPKGIEVVTVFPGFVATPLTDKNTFAMPMIITVEQASQEIRAQLARG 206 (240)
T ss_pred CC---CCCchhhHHHHHHHHHHHHHHHHHHhcCceEEEEeCCcCCCCCcCCCCCCCCcccCHHHHHHHHHHHHhcC
Confidence 76 778899999999999999999999999999999999999999865431 358999999999988764
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-32 Score=223.58 Aligned_cols=223 Identities=26% Similarity=0.370 Sum_probs=186.7
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEe-ecCchhHHHHHH-HHhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFAT-CRNKDKAVELLA-LAQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~-~r~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|+++||||+||||.++|++|+++| +.|++. .|+.++.++..+ +.....++.++++|++|.++ +..+++++.+.
T Consensus 7 ~~ilItGasg~iG~~la~~l~~~G----~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~-i~~~~~~~~~~ 81 (254)
T PRK12746 7 KVALVTGASRGIGRAIAMRLANDG----ALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDG-VKKLVEQLKNE 81 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC----CEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHH-HHHHHHHHHHH
Confidence 689999999999999999999999 788774 788776665533 33334578899999999999 99999999887
Q ss_pred hcC----CCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeec
Q psy11190 80 VKD----QGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSS 155 (248)
Q Consensus 80 ~~~----~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss 155 (248)
++. +++|++|||||...+ ..+.+.+.+.++..+++|+.+++++++.+++.|.. .+++|++||
T Consensus 82 ~~~~~~~~~id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-------------~~~~v~~sS 147 (254)
T PRK12746 82 LQIRVGTSEIDILVNNAGIGTQ-GTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRA-------------EGRVINISS 147 (254)
T ss_pred hccccCCCCccEEEECCCCCCC-CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc-------------CCEEEEECC
Confidence 621 259999999998765 66777889999999999999999999999999854 468999999
Q ss_pred CCCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC-----------------CCchh
Q psy11190 156 IMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA-----------------PLEVG 218 (248)
Q Consensus 156 ~~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~-----------------~~~~~ 218 (248)
..+..+. +++..|+++|++++.|+++++.++.++|++++.+.||+++|++..... ...++
T Consensus 148 ~~~~~~~---~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (254)
T PRK12746 148 AEVRLGF---TGSIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDPEIRNFATNSSVFGRIGQVE 224 (254)
T ss_pred HHhcCCC---CCCcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhccChhHHHHHHhcCCcCCCCCHH
Confidence 8887665 778899999999999999999999999999999999999999854311 23789
Q ss_pred hHHHHHHHHhhhcccccccceeeeCCee
Q psy11190 219 AATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
++++.++.+++......+|..+..+|..
T Consensus 225 dva~~~~~l~~~~~~~~~g~~~~i~~~~ 252 (254)
T PRK12746 225 DIADAVAFLASSDSRWVTGQIIDVSGGF 252 (254)
T ss_pred HHHHHHHHHcCcccCCcCCCEEEeCCCc
Confidence 9999998888776666788888877653
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-32 Score=231.02 Aligned_cols=222 Identities=22% Similarity=0.263 Sum_probs=176.7
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHH-HHhh--cCCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQ--HSNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~-~~~~--~~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
|+++||||++|||+++|++|+++| ++|++++|+.++.++..+ +... ..++.++++|++|.++ ++++++++.+
T Consensus 17 k~vlItGas~gIG~~~a~~l~~~G----~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~-v~~~~~~~~~ 91 (306)
T PRK06197 17 RVAVVTGANTGLGYETAAALAAKG----AHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLAS-VRAAADALRA 91 (306)
T ss_pred CEEEEcCCCCcHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHH-HHHHHHHHHh
Confidence 689999999999999999999999 899999999887766533 3222 3467889999999999 9999999988
Q ss_pred hhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 79 VVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
.++ ++|+||||||...+ ....+.++++..+++|+.+++.+++.+++.|++. +.++||++||..+
T Consensus 92 ~~~--~iD~li~nAg~~~~---~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~-----------~~~~iV~vSS~~~ 155 (306)
T PRK06197 92 AYP--RIDLLINNAGVMYT---PKQTTADGFELQFGTNHLGHFALTGLLLDRLLPV-----------PGSRVVTVSSGGH 155 (306)
T ss_pred hCC--CCCEEEECCccccC---CCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhC-----------CCCEEEEECCHHH
Confidence 877 59999999998643 2346778999999999999999999999999875 4689999999875
Q ss_pred cc-cc---------cCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEe--cCcceecCCCCCCC-------------
Q psy11190 159 SI-ED---------NTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAM--HPGWVKTDMGGSNA------------- 213 (248)
Q Consensus 159 ~~-~~---------~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v--~PG~v~t~~~~~~~------------- 213 (248)
.. +. .++.+...|+++|+++++|++.++++++++|++|+++ +||+++|+|.+...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~~~~~~~~~~~~~~~~~~ 235 (306)
T PRK06197 156 RIRAAIHFDDLQWERRYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELARNLPRALRPVATVLAPL 235 (306)
T ss_pred hccCCCCccccCcccCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcccccCcHHHHHHHHHHHhh
Confidence 43 10 1124456899999999999999999998888776655 79999999976532
Q ss_pred -CCchhhHHHHHHHHhhhcccccccceeeeCCe
Q psy11190 214 -PLEVGAATAGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 214 -~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
..++++.+...+.....+ ...+|.|+.++|.
T Consensus 236 ~~~~~~~g~~~~~~~~~~~-~~~~g~~~~~~~~ 267 (306)
T PRK06197 236 LAQSPEMGALPTLRAATDP-AVRGGQYYGPDGF 267 (306)
T ss_pred hcCCHHHHHHHHHHHhcCC-CcCCCeEEccCcc
Confidence 235666666666555443 3457899987763
|
|
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-31 Score=222.14 Aligned_cols=222 Identities=26% Similarity=0.343 Sum_probs=187.9
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecC----chhHHHHH-HHHhhcCCceeEEeeccCCchhhhhHHHHh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRN----KDKAVELL-ALAQQHSNLHVIELDVTDFSKQQDVLFKDI 76 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~----~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i 76 (248)
|+++||||+|+||+++|++|+++| +.|++++|. .+..+++. +....+.++.++.+|+++.++ ++++++++
T Consensus 7 ~~ilItGasg~iG~~la~~l~~~g----~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-~~~~~~~~ 81 (249)
T PRK12827 7 RRVLITGGSGGLGRAIAVRLAADG----ADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAA-TRAALDAG 81 (249)
T ss_pred CEEEEECCCChHHHHHHHHHHHCC----CeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHH-HHHHHHHH
Confidence 689999999999999999999999 889887653 33333332 222234578899999999999 99999998
Q ss_pred hhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHh-HHHHhhhhcccCCCCCCCCceEEEeec
Q psy11190 77 SDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTML-PLLKKASEANSAAPLGSSRAAIVNVSS 155 (248)
Q Consensus 77 ~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-~~l~~~~~~~~~~~~~~~~~~iv~vss 155 (248)
.+.++ ++|++|||||...+ ..+.+.+.+++++.+++|+.+++++++.+. +.+.++ ..+++|++||
T Consensus 82 ~~~~~--~~d~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----------~~~~iv~~sS 147 (249)
T PRK12827 82 VEEFG--RLDILVNNAGIATD-AAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRAR-----------RGGRIVNIAS 147 (249)
T ss_pred HHHhC--CCCEEEECCCCCCC-CCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcC-----------CCeEEEEECC
Confidence 88776 59999999998765 677788899999999999999999999999 666553 4678999999
Q ss_pred CCCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC-------------CCchhhHHH
Q psy11190 156 IMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA-------------PLEVGAATA 222 (248)
Q Consensus 156 ~~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~-------------~~~~~~~~~ 222 (248)
..+..+. +++..|+.+|++++.+++.++.++.++|++++.++||+++|++..... ..+++++++
T Consensus 148 ~~~~~~~---~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~va~ 224 (249)
T PRK12827 148 VAGVRGN---RGQVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAAPTEHLLNPVPVQRLGEPDEVAA 224 (249)
T ss_pred chhcCCC---CCCchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccchHHHHHhhCCCcCCcCHHHHHH
Confidence 9988776 778899999999999999999999989999999999999999865422 237899999
Q ss_pred HHHHHhhhcccccccceeeeCCe
Q psy11190 223 GIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 223 ~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
.++.++.......+|+++.++|.
T Consensus 225 ~~~~l~~~~~~~~~g~~~~~~~g 247 (249)
T PRK12827 225 LVAFLVSDAASYVTGQVIPVDGG 247 (249)
T ss_pred HHHHHcCcccCCccCcEEEeCCC
Confidence 99999988778889999999885
|
|
| >KOG1199|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-33 Score=210.41 Aligned_cols=225 Identities=22% Similarity=0.231 Sum_probs=193.6
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhcC
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVKD 82 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~~ 82 (248)
+++||||.||+|++.+++|+++| +.|++.+..+.+.++..+.+ ++++.|.++|++++++ ++..+...+..+|
T Consensus 11 valvtggasglg~ataerlakqg----asv~lldlp~skg~~vakel--g~~~vf~padvtsekd-v~aala~ak~kfg- 82 (260)
T KOG1199|consen 11 VALVTGGASGLGKATAERLAKQG----ASVALLDLPQSKGADVAKEL--GGKVVFTPADVTSEKD-VRAALAKAKAKFG- 82 (260)
T ss_pred eEEeecCcccccHHHHHHHHhcC----ceEEEEeCCcccchHHHHHh--CCceEEeccccCcHHH-HHHHHHHHHhhcc-
Confidence 68999999999999999999999 89999999888777665444 6799999999999999 9999999999999
Q ss_pred CCccEEEeccccCCcccc-----CCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCC
Q psy11190 83 QGLNVLVNNAGIAAKFTR-----LGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIM 157 (248)
Q Consensus 83 ~~iD~lv~~ag~~~~~~~-----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~ 157 (248)
++|.+|||||+..-.+. -...+.|++++.+++|+.|+|+++++..-+|-++.++..+ .+|.||+..|.+
T Consensus 83 -rld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~g-----qrgviintasva 156 (260)
T KOG1199|consen 83 -RLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNG-----QRGVIINTASVA 156 (260)
T ss_pred -ceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCC-----cceEEEeeceee
Confidence 69999999998864322 2346889999999999999999999999999887665543 579999999999
Q ss_pred CcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC----------------CCchhhHH
Q psy11190 158 GSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA----------------PLEVGAAT 221 (248)
Q Consensus 158 ~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~----------------~~~~~~~~ 221 (248)
++-+. .++.+|++||+++.+|+--++++++..|||++.|.||.++|||..+.+ ...|.|-+
T Consensus 157 afdgq---~gqaaysaskgaivgmtlpiardla~~gir~~tiapglf~tpllsslpekv~~fla~~ipfpsrlg~p~eya 233 (260)
T KOG1199|consen 157 AFDGQ---TGQAAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLLSSLPEKVKSFLAQLIPFPSRLGHPHEYA 233 (260)
T ss_pred eecCc---cchhhhhcccCceEeeechhhhhcccCceEEEeecccccCChhhhhhhHHHHHHHHHhCCCchhcCChHHHH
Confidence 88655 899999999999999999999999999999999999999999987654 34577777
Q ss_pred HHHHHHhhhcccccccceeeeCCee
Q psy11190 222 AGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 222 ~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
+-+-..++. +..||..+++||..
T Consensus 234 hlvqaiien--p~lngevir~dgal 256 (260)
T KOG1199|consen 234 HLVQAIIEN--PYLNGEVIRFDGAL 256 (260)
T ss_pred HHHHHHHhC--cccCCeEEEeccee
Confidence 655555554 67899999999863
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-31 Score=222.43 Aligned_cols=222 Identities=22% Similarity=0.270 Sum_probs=189.9
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
+|+++||||+|+||+++++.|+++| ++|++++|+.++++.+.+.. ...++.++++|++|.++ +..+++++.+.+
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g----~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~-~~~~~~~~~~~~ 75 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAG----DRVLALDIDAAALAAFADAL-GDARFVPVACDLTDAAS-LAAALANAAAER 75 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHh-cCCceEEEEecCCCHHH-HHHHHHHHHHHc
Confidence 4789999999999999999999999 89999999988777664433 23468899999999999 999988888877
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+ ++|++||++|...+ .++.+.+.++|+..+.+|+.+++.+++++++.+.++ +.++|+++||..+..
T Consensus 76 ~--~~d~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----------~~~~iv~~sS~~~~~ 141 (257)
T PRK07074 76 G--PVDVLVANAGAARA-ASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKR-----------SRGAVVNIGSVNGMA 141 (257)
T ss_pred C--CCCEEEECCCCCCC-CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----------CCeEEEEEcchhhcC
Confidence 6 59999999998765 566777889999999999999999999999998775 568899999977643
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC------------------CCCchhhHHH
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN------------------APLEVGAATA 222 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~------------------~~~~~~~~~~ 222 (248)
. .+.+.|+.+|++++.++++++.++.++||+|+.+.||+++|++.... ....+++++.
T Consensus 142 -~---~~~~~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~ 217 (257)
T PRK07074 142 -A---LGHPAYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQVFEELKKWYPLQDFATPDDVAN 217 (257)
T ss_pred -C---CCCcccHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccChHHHHHHHhcCCCCCCCCHHHHHH
Confidence 2 45678999999999999999999999999999999999999975321 1357899999
Q ss_pred HHHHHhhhcccccccceeeeCCee
Q psy11190 223 GIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 223 ~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
.++.++++.....+|+.+.++|..
T Consensus 218 ~~~~l~~~~~~~~~g~~~~~~~g~ 241 (257)
T PRK07074 218 AVLFLASPAARAITGVCLPVDGGL 241 (257)
T ss_pred HHHHHcCchhcCcCCcEEEeCCCc
Confidence 999999877778889999888854
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-31 Score=222.56 Aligned_cols=219 Identities=22% Similarity=0.270 Sum_probs=181.1
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeec-CchhHHHHHH-HHhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCR-NKDKAVELLA-LAQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r-~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|++|||||++|||++++++|+++| ++|++..+ +.+.++.+.+ +...+.++.++++|++|.++ +.++++++.+.
T Consensus 10 k~vlItGas~giG~~la~~l~~~g----~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~-~~~~~~~~~~~ 84 (258)
T PRK09134 10 RAALVTGAARRIGRAIALDLAAHG----FDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAE-VRALVARASAA 84 (258)
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC----CEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH-HHHHHHHHHHH
Confidence 689999999999999999999999 88888765 4445555533 33334578899999999999 99999999888
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
++ ++|+||||||...+ .++.+.+.+++++.+++|+.+++++++++++.+.++ ..+++++++|..+.
T Consensus 85 ~~--~iD~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----------~~~~iv~~~s~~~~ 150 (258)
T PRK09134 85 LG--PITLLVNNASLFEY-DSAASFTRASWDRHMATNLRAPFVLAQAFARALPAD-----------ARGLVVNMIDQRVW 150 (258)
T ss_pred cC--CCCEEEECCcCCCC-CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----------CCceEEEECchhhc
Confidence 76 69999999998765 667778899999999999999999999999998764 46889999887665
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC-------------CCCCchhhHHHHHHH
Q psy11190 160 IEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS-------------NAPLEVGAATAGIIQ 226 (248)
Q Consensus 160 ~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~-------------~~~~~~~~~~~~~~~ 226 (248)
.+. +.+..|+++|+++++|++.++.++.+. |+|++|+||++.|+.... ....+++++++.++.
T Consensus 151 ~~~---p~~~~Y~~sK~a~~~~~~~la~~~~~~-i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~ 226 (258)
T PRK09134 151 NLN---PDFLSYTLSKAALWTATRTLAQALAPR-IRVNAIGPGPTLPSGRQSPEDFARQHAATPLGRGSTPEEIAAAVRY 226 (258)
T ss_pred CCC---CCchHHHHHHHHHHHHHHHHHHHhcCC-cEEEEeecccccCCcccChHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 444 566789999999999999999999775 999999999998865321 113579999999999
Q ss_pred HhhhcccccccceeeeCCe
Q psy11190 227 FIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 227 ~~~~~~~~~~g~~~~~~g~ 245 (248)
+++. +..+|+++.++|.
T Consensus 227 ~~~~--~~~~g~~~~i~gg 243 (258)
T PRK09134 227 LLDA--PSVTGQMIAVDGG 243 (258)
T ss_pred HhcC--CCcCCCEEEECCC
Confidence 9874 4578999888874
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-31 Score=219.77 Aligned_cols=208 Identities=23% Similarity=0.319 Sum_probs=181.8
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHH-HHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELL-ALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|+++|||++++||++++++|+++| ++|++++|+.++.+++. ++...+.++.++++|+++.++ +..+++++.+.+
T Consensus 8 ~~vlVtG~sg~iG~~l~~~L~~~G----~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~~ 82 (239)
T PRK07666 8 KNALITGAGRGIGRAVAIALAKEG----VNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEE-VTAAIEQLKNEL 82 (239)
T ss_pred CEEEEEcCCchHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHH-HHHHHHHHHHHc
Confidence 689999999999999999999999 89999999988777663 333334578899999999999 999999998887
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+ ++|++|||+|.... ..+.+.+.+++++.+++|+.+++++++.+++.+.++ ..+++|++||..+..
T Consensus 83 ~--~id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----------~~~~iv~~ss~~~~~ 148 (239)
T PRK07666 83 G--SIDILINNAGISKF-GKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIER-----------QSGDIINISSTAGQK 148 (239)
T ss_pred C--CccEEEEcCccccC-CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-----------CCcEEEEEcchhhcc
Confidence 6 59999999998654 567778899999999999999999999999999875 568999999999887
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC--------CCCchhhHHHHHHHHhhhc
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN--------APLEVGAATAGIIQFIQSL 231 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~--------~~~~~~~~~~~~~~~~~~~ 231 (248)
+. ++...|+.+|+++..|++.++.++.++||+++.|.||+++|++.... ...+++++++.++..++..
T Consensus 149 ~~---~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~a~~~~~~l~~~ 224 (239)
T PRK07666 149 GA---AVTSAYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDLGLTDGNPDKVMQPEDLAEFIVAQLKLN 224 (239)
T ss_pred CC---CCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhccccccCCCCCCCHHHHHHHHHHHHhCC
Confidence 76 77788999999999999999999999999999999999999975432 2467899999999999764
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-31 Score=219.60 Aligned_cols=210 Identities=23% Similarity=0.337 Sum_probs=181.2
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|+++||||+++||++++++|+++| ++|++++|+.++. ....++++|+++.++ ++.+++++.+.++
T Consensus 4 k~vlItG~s~~iG~~ia~~l~~~G----~~v~~~~r~~~~~----------~~~~~~~~D~~~~~~-~~~~~~~~~~~~~ 68 (234)
T PRK07577 4 RTVLVTGATKGIGLALSLRLANLG----HQVIGIARSAIDD----------FPGELFACDLADIEQ-TAATLAQINEIHP 68 (234)
T ss_pred CEEEEECCCCcHHHHHHHHHHHCC----CEEEEEeCCcccc----------cCceEEEeeCCCHHH-HHHHHHHHHHhCC
Confidence 789999999999999999999999 8999999987541 012578999999999 9999888887653
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
+|++|||+|...+ .++.+.+.+++++.+++|+.+++++.+.++|.|+++ +.++|+++||... .+
T Consensus 69 ---~d~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----------~~~~iv~~sS~~~-~~ 132 (234)
T PRK07577 69 ---VDAIVNNVGIALP-QPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLR-----------EQGRIVNICSRAI-FG 132 (234)
T ss_pred ---CcEEEECCCCCCC-CChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----------CCcEEEEEccccc-cC
Confidence 9999999998765 667778899999999999999999999999999875 5689999999853 34
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC------------------CCchhhHHHH
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA------------------PLEVGAATAG 223 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~------------------~~~~~~~~~~ 223 (248)
. ++...|+++|+++++|+++++.++.++||++++|+||+++|++..... ..+|++++..
T Consensus 133 ~---~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 209 (234)
T PRK07577 133 A---LDRTSYSAAKSALVGCTRTWALELAEYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLASIPMRRLGTPEEVAAA 209 (234)
T ss_pred C---CCchHHHHHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCcccccccccchhHHHHHhhcCCCCCCcCHHHHHHH
Confidence 4 667899999999999999999999999999999999999999864321 1368999999
Q ss_pred HHHHhhhcccccccceeeeCCe
Q psy11190 224 IIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 224 ~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
++.++.......+|.++.++|.
T Consensus 210 ~~~l~~~~~~~~~g~~~~~~g~ 231 (234)
T PRK07577 210 IAFLLSDDAGFITGQVLGVDGG 231 (234)
T ss_pred HHHHhCcccCCccceEEEecCC
Confidence 9999988777889999999885
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.8e-31 Score=222.95 Aligned_cols=208 Identities=30% Similarity=0.387 Sum_probs=179.7
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhh---cCCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQ---HSNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
|++|||||+|+||+++++.|+++| ++|++++|+.+..+++.+.... ..++.++.+|++|.++ ++. ++++.+
T Consensus 4 k~~lItGasg~iG~~la~~l~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~-~~~-~~~~~~ 77 (280)
T PRK06914 4 KIAIVTGASSGFGLLTTLELAKKG----YLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNS-IHN-FQLVLK 77 (280)
T ss_pred CEEEEECCCchHHHHHHHHHHhCC----CEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHH-HHH-HHHHHH
Confidence 689999999999999999999999 8999999998877766443322 2478899999999998 888 888888
Q ss_pred hhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 79 VVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
.++ ++|++|||||...+ ..+.+.+.+++++.+++|+.+++.+++.++|.|++. +.++||++||..+
T Consensus 78 ~~~--~id~vv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----------~~~~iv~vsS~~~ 143 (280)
T PRK06914 78 EIG--RIDLLVNNAGYANG-GFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQ-----------KSGKIINISSISG 143 (280)
T ss_pred hcC--CeeEEEECCccccc-CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----------CCCEEEEECcccc
Confidence 776 59999999998765 667778899999999999999999999999999875 4689999999988
Q ss_pred cccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC--------------------------
Q psy11190 159 SIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN-------------------------- 212 (248)
Q Consensus 159 ~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~-------------------------- 212 (248)
..+. +++..|+++|++++.|+++++.++.++||+++.+.||+++|++....
T Consensus 144 ~~~~---~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (280)
T PRK06914 144 RVGF---PGLSPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHIN 220 (280)
T ss_pred cCCC---CCCchhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHHHh
Confidence 8776 77889999999999999999999999999999999999999975421
Q ss_pred ----CCCchhhHHHHHHHHhhhcc
Q psy11190 213 ----APLEVGAATAGIIQFIQSLG 232 (248)
Q Consensus 213 ----~~~~~~~~~~~~~~~~~~~~ 232 (248)
...++++++..++.++++..
T Consensus 221 ~~~~~~~~~~dva~~~~~~~~~~~ 244 (280)
T PRK06914 221 SGSDTFGNPIDVANLIVEIAESKR 244 (280)
T ss_pred hhhhccCCHHHHHHHHHHHHcCCC
Confidence 12478999999999998744
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=8.9e-31 Score=216.99 Aligned_cols=220 Identities=27% Similarity=0.319 Sum_probs=184.1
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHH-HhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLAL-AQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|+++|||+++|||+++++.|+++| ++|++++|+.+++++..+. ...+.++.++++|+++.++ ++++++.+.+.+
T Consensus 6 ~~~lItG~~g~iG~~~a~~l~~~G----~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~~ 80 (253)
T PRK08217 6 KVIVITGGAQGLGRAMAEYLAQKG----AKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEED-VEATFAQIAEDF 80 (253)
T ss_pred CEEEEECCCchHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHH-HHHHHHHHHHHc
Confidence 589999999999999999999999 8999999998777666433 3335578889999999998 999999988776
Q ss_pred cCCCccEEEeccccCCcccc--------C-CCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEE
Q psy11190 81 KDQGLNVLVNNAGIAAKFTR--------L-GLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIV 151 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~--------~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv 151 (248)
+ ++|+||||||...+ .. + .+.+.++++..+++|+.+++++.+.+++.|.++. ..++|+
T Consensus 81 ~--~id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~----------~~~~iv 147 (253)
T PRK08217 81 G--QLNGLINNAGILRD-GLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESG----------SKGVII 147 (253)
T ss_pred C--CCCEEEECCCccCc-CcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC----------CCeEEE
Confidence 6 59999999997543 21 1 5668899999999999999999999999997642 357899
Q ss_pred EeecCCCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC---------------CCc
Q psy11190 152 NVSSIMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA---------------PLE 216 (248)
Q Consensus 152 ~vss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~---------------~~~ 216 (248)
++||.. ..+. +++..|+++|+++++++++|+.++.++||++++++||+++|++..... ..+
T Consensus 148 ~~ss~~-~~~~---~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (253)
T PRK08217 148 NISSIA-RAGN---MGQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAMKPEALERLEKMIPVGRLGE 223 (253)
T ss_pred EEcccc-ccCC---CCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCHHHHHHHHhcCCcCCCcC
Confidence 998864 3444 678899999999999999999999989999999999999999865421 247
Q ss_pred hhhHHHHHHHHhhhcccccccceeeeCCe
Q psy11190 217 VGAATAGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
++++++.+..++.. ...+|..+.++|.
T Consensus 224 ~~~~a~~~~~l~~~--~~~~g~~~~~~gg 250 (253)
T PRK08217 224 PEEIAHTVRFIIEN--DYVTGRVLEIDGG 250 (253)
T ss_pred HHHHHHHHHHHHcC--CCcCCcEEEeCCC
Confidence 89999999998854 4678999998885
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=8.1e-31 Score=220.54 Aligned_cols=209 Identities=22% Similarity=0.301 Sum_probs=178.5
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHH-HHhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
+|+++||||+++||++++++|+++| ++|++.+|+.+.+++..+ ....+.++.++++|+++.++ +.++++++.+.
T Consensus 10 ~~~vlVtGa~g~iG~~la~~L~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-~~~~~~~~~~~ 84 (274)
T PRK07775 10 RRPALVAGASSGIGAATAIELAAAG----FPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDS-VKSFVAQAEEA 84 (274)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHH-HHHHHHHHHHh
Confidence 4799999999999999999999999 899999998877665533 33334578889999999999 99999999887
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
++ ++|++|||||.... ..+.+.+.+++++.+++|+.+++++++++++.+.++ ..++||++||..+.
T Consensus 85 ~~--~id~vi~~Ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~-----------~~g~iv~isS~~~~ 150 (274)
T PRK07775 85 LG--EIEVLVSGAGDTYF-GKLHEISTEQFESQVQIHLVGANRLATAVLPGMIER-----------RRGDLIFVGSDVAL 150 (274)
T ss_pred cC--CCCEEEECCCcCCC-cccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----------CCceEEEECChHhc
Confidence 76 59999999998664 566677889999999999999999999999998764 46899999998887
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC---------------------CCCchh
Q psy11190 160 IEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN---------------------APLEVG 218 (248)
Q Consensus 160 ~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~---------------------~~~~~~ 218 (248)
.+. ++...|+++|++++.|++.++.++.++||++++|+||+++|++.... ....++
T Consensus 151 ~~~---~~~~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (274)
T PRK07775 151 RQR---PHMGAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAKWGQARHDYFLRAS 227 (274)
T ss_pred CCC---CCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHHhcccccccccCHH
Confidence 665 66788999999999999999999988899999999999999864321 135799
Q ss_pred hHHHHHHHHhhhc
Q psy11190 219 AATAGIIQFIQSL 231 (248)
Q Consensus 219 ~~~~~~~~~~~~~ 231 (248)
++++.++.+++.+
T Consensus 228 dva~a~~~~~~~~ 240 (274)
T PRK07775 228 DLARAITFVAETP 240 (274)
T ss_pred HHHHHHHHHhcCC
Confidence 9999999988763
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=99.98 E-value=7.5e-31 Score=217.19 Aligned_cols=224 Identities=27% Similarity=0.342 Sum_probs=192.2
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHH-HHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|+++||||+++||++++++|+++| ++|++++|+.++..+..+ +.....++.++.+|++|.++ ++.+++++.+.+
T Consensus 7 ~~ilItGasg~iG~~l~~~l~~~g----~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~-~~~~~~~~~~~~ 81 (251)
T PRK12826 7 RVALVTGAARGIGRAIAVRLAADG----AEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAA-LKAAVAAGVEDF 81 (251)
T ss_pred CEEEEcCCCCcHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHH-HHHHHHHHHHHh
Confidence 689999999999999999999999 899999999877666633 33334568899999999999 999999999888
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc-
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS- 159 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~- 159 (248)
+ ++|++||++|...+ .++.+.+.++++..++.|+.+++.+++.+++.+.++ +.++++++||..+.
T Consensus 82 ~--~~d~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----------~~~~ii~~ss~~~~~ 147 (251)
T PRK12826 82 G--RLDILVANAGIFPL-TPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRA-----------GGGRIVLTSSVAGPR 147 (251)
T ss_pred C--CCCEEEECCCCCCC-CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----------CCcEEEEEechHhhc
Confidence 7 59999999998765 667778899999999999999999999999999875 46889999998876
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC----------------CCchhhHHHH
Q psy11190 160 IEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA----------------PLEVGAATAG 223 (248)
Q Consensus 160 ~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~----------------~~~~~~~~~~ 223 (248)
.+. ++...|+.+|++++.+++.++.++.+.|++++.+.||+++|++.+... ...++++++.
T Consensus 148 ~~~---~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~ 224 (251)
T PRK12826 148 VGY---PGLAHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGDAQWAEAIAAAIPLGRLGEPEDIAAA 224 (251)
T ss_pred cCC---CCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCchHHHHHHHhcCCCCCCcCHHHHHHH
Confidence 444 677899999999999999999999888999999999999998653221 2468999999
Q ss_pred HHHHhhhcccccccceeeeCCeec
Q psy11190 224 IIQFIQSLGEAHNGGFFEYTGKAI 247 (248)
Q Consensus 224 ~~~~~~~~~~~~~g~~~~~~g~~~ 247 (248)
++.++.......+|+.+..+|..+
T Consensus 225 ~~~l~~~~~~~~~g~~~~~~~g~~ 248 (251)
T PRK12826 225 VLFLASDEARYITGQTLPVDGGAT 248 (251)
T ss_pred HHHHhCccccCcCCcEEEECCCcc
Confidence 998887766677999999988643
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=7.2e-31 Score=219.26 Aligned_cols=208 Identities=30% Similarity=0.388 Sum_probs=180.3
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHH-HHhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
||++|||||+|+||++++++|+++| ++|++++|+.++.+++.+ +.....++.++.+|++|.++ +..+++.+.+.
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g----~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~-~~~~~~~~~~~ 75 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAG----AQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEA-CERLIEAAVAR 75 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHH-HHHHHHHHHHH
Confidence 6899999999999999999999999 899999999877766633 33334578889999999999 99999999887
Q ss_pred hcCCCccEEEeccccCCccccCCCC-ChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLL-KPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
++ ++|++|||||.... ..+.+. +.+++++.+++|+.+++.+++.+++.+.+ ..+++|++||..+
T Consensus 76 ~~--~id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~------------~~~~iv~~sS~~~ 140 (263)
T PRK06181 76 FG--GIDILVNNAGITMW-SRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKA------------SRGQIVVVSSLAG 140 (263)
T ss_pred cC--CCCEEEECCCcccc-cchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh------------cCCEEEEEecccc
Confidence 76 59999999998765 566666 88999999999999999999999999876 4689999999988
Q ss_pred cccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC----------------CCCchhhHHH
Q psy11190 159 SIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN----------------APLEVGAATA 222 (248)
Q Consensus 159 ~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~----------------~~~~~~~~~~ 222 (248)
..+. +++..|+++|++++.+++.++.++.+++++++++.||+++|++.+.. ...+|+++++
T Consensus 141 ~~~~---~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~ 217 (263)
T PRK06181 141 LTGV---PTRSGYAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKRALDGDGKPLGKSPMQESKIMSAEECAE 217 (263)
T ss_pred cCCC---CCccHHHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcchhhccccccccccccccccCCCCHHHHHH
Confidence 8766 77889999999999999999999999999999999999999975321 2468999999
Q ss_pred HHHHHhhhc
Q psy11190 223 GIIQFIQSL 231 (248)
Q Consensus 223 ~~~~~~~~~ 231 (248)
.++..+...
T Consensus 218 ~i~~~~~~~ 226 (263)
T PRK06181 218 AILPAIARR 226 (263)
T ss_pred HHHHHhhCC
Confidence 999988753
|
|
| >KOG1209|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-31 Score=207.46 Aligned_cols=184 Identities=28% Similarity=0.349 Sum_probs=163.2
Q ss_pred ceEEEecCC-CchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCN-RGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas-~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|.++|||++ ||||.+++++|+++| ++|+.+.|..+...++.. ...+.....|++++++ +..+..++++.
T Consensus 8 k~VlItgcs~GGIG~ala~ef~~~G----~~V~AtaR~~e~M~~L~~----~~gl~~~kLDV~~~~~-V~~v~~evr~~- 77 (289)
T KOG1209|consen 8 KKVLITGCSSGGIGYALAKEFARNG----YLVYATARRLEPMAQLAI----QFGLKPYKLDVSKPEE-VVTVSGEVRAN- 77 (289)
T ss_pred CeEEEeecCCcchhHHHHHHHHhCC----eEEEEEccccchHhhHHH----hhCCeeEEeccCChHH-HHHHHHHHhhC-
Confidence 678999988 899999999999999 999999999887665532 2358899999999999 99998998884
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
.++++|+|+||||..-. .+.-+.+.++.+++|++|++|++..++++...+.+ .+|.||+++|.++..
T Consensus 78 ~~Gkld~L~NNAG~~C~-~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~lik------------aKGtIVnvgSl~~~v 144 (289)
T KOG1209|consen 78 PDGKLDLLYNNAGQSCT-FPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIK------------AKGTIVNVGSLAGVV 144 (289)
T ss_pred CCCceEEEEcCCCCCcc-cccccCCHHHHHhhhccceeeeehHHHHHHHHHHH------------ccceEEEecceeEEe
Confidence 33479999999997643 67788899999999999999999999999977776 589999999999998
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS 211 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~ 211 (248)
++ +-.+.|.+||+|++++++.|+.|++|.||+|..+.||.+.|.....
T Consensus 145 pf---pf~~iYsAsKAAihay~~tLrlEl~PFgv~Vin~itGGv~T~Ia~k 192 (289)
T KOG1209|consen 145 PF---PFGSIYSASKAAIHAYARTLRLELKPFGVRVINAITGGVATDIADK 192 (289)
T ss_pred cc---chhhhhhHHHHHHHHhhhhcEEeeeccccEEEEecccceecccccC
Confidence 87 6678999999999999999999999999999999999999987544
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-30 Score=214.22 Aligned_cols=223 Identities=25% Similarity=0.350 Sum_probs=189.9
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchh-HHHHHH-HHhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDK-AVELLA-LAQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~-~~~~~~-~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|+++|||++|+||+++++.|+++| ++|++..|+.++ .+...+ +.....++.++.+|+++.++ +..+++++.+.
T Consensus 6 ~~vlItG~sg~iG~~l~~~l~~~G----~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-~~~~~~~~~~~ 80 (248)
T PRK05557 6 KVALVTGASRGIGRAIAERLAAQG----ANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAES-VERAVDEAKAE 80 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCC----CEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHH-HHHHHHHHHHH
Confidence 789999999999999999999999 899888877653 334433 32334578889999999999 99999999887
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
++ ++|++||+||...+ ....+.+.+.+++.+.+|+.+++.+.+.+++.+.+. +.++++++||..+.
T Consensus 81 ~~--~id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----------~~~~~v~iss~~~~ 146 (248)
T PRK05557 81 FG--GVDILVNNAGITRD-NLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQ-----------RSGRIINISSVVGL 146 (248)
T ss_pred cC--CCCEEEECCCcCCC-CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----------CCeEEEEEcccccC
Confidence 76 59999999998765 666677889999999999999999999999998774 46789999999887
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC---------------CCchhhHHHHH
Q psy11190 160 IEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA---------------PLEVGAATAGI 224 (248)
Q Consensus 160 ~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~---------------~~~~~~~~~~~ 224 (248)
.+. ++...|+++|++++.+++.++.++.+.|++++.++||+++|++.+... ..+++++++.+
T Consensus 147 ~~~---~~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~ 223 (248)
T PRK05557 147 MGN---PGQANYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDALPEDVKEAILAQIPLGRLGQPEEIASAV 223 (248)
T ss_pred cCC---CCCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCccccccChHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence 776 778899999999999999999999989999999999999998765421 25689999999
Q ss_pred HHHhhhcccccccceeeeCCee
Q psy11190 225 IQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 225 ~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
..++.......+|+.+.++|..
T Consensus 224 ~~l~~~~~~~~~g~~~~i~~~~ 245 (248)
T PRK05557 224 AFLASDEAAYITGQTLHVNGGM 245 (248)
T ss_pred HHHcCcccCCccccEEEecCCc
Confidence 8888776777899999998864
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.7e-31 Score=236.09 Aligned_cols=221 Identities=25% Similarity=0.330 Sum_probs=187.8
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|+++||||++|||++++++|+++| ++|+++++.... +.+.++... -...++.+|+++.++ ++.+++.+.+.++
T Consensus 211 ~~vlItGasggIG~~la~~l~~~G----a~vi~~~~~~~~-~~l~~~~~~-~~~~~~~~Dv~~~~~-~~~~~~~~~~~~g 283 (450)
T PRK08261 211 KVALVTGAARGIGAAIAEVLARDG----AHVVCLDVPAAG-EALAAVANR-VGGTALALDITAPDA-PARIAEHLAERHG 283 (450)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCC----CEEEEEeCCccH-HHHHHHHHH-cCCeEEEEeCCCHHH-HHHHHHHHHHhCC
Confidence 689999999999999999999999 899999885322 222222221 134578999999999 9999999988876
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+||||||.... ..+.+.+.++|+..+++|+.+++++.+.+++.+..+ +.++||++||..+..+
T Consensus 284 --~id~vi~~AG~~~~-~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-----------~~g~iv~~SS~~~~~g 349 (450)
T PRK08261 284 --GLDIVVHNAGITRD-KTLANMDEARWDSVLAVNLLAPLRITEALLAAGALG-----------DGGRIVGVSSISGIAG 349 (450)
T ss_pred --CCCEEEECCCcCCC-CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhc-----------CCCEEEEECChhhcCC
Confidence 59999999998765 677788999999999999999999999999975543 4689999999998877
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC---------------CCchhhHHHHHHH
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA---------------PLEVGAATAGIIQ 226 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~---------------~~~~~~~~~~~~~ 226 (248)
. +++..|+++|+++++|+++++.++.++||++|+|+||+++|+|+...+ ...|++++..+++
T Consensus 350 ~---~~~~~Y~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~l~~~~~p~dva~~~~~ 426 (450)
T PRK08261 350 N---RGQTNYAASKAGVIGLVQALAPLLAERGITINAVAPGFIETQMTAAIPFATREAGRRMNSLQQGGLPVDVAETIAW 426 (450)
T ss_pred C---CCChHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhccchhHHHHHhhcCCcCCCCCHHHHHHHHHH
Confidence 6 788899999999999999999999999999999999999999865321 2468999999999
Q ss_pred HhhhcccccccceeeeCCee
Q psy11190 227 FIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 227 ~~~~~~~~~~g~~~~~~g~~ 246 (248)
++++.....+|+.+.++|..
T Consensus 427 l~s~~~~~itG~~i~v~g~~ 446 (450)
T PRK08261 427 LASPASGGVTGNVVRVCGQS 446 (450)
T ss_pred HhChhhcCCCCCEEEECCCc
Confidence 99887888999999999864
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-30 Score=215.95 Aligned_cols=223 Identities=22% Similarity=0.314 Sum_probs=190.9
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHh-hcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQ-QHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
||++|||||+++||++++++|+++| ++|++++|+.+..+.+.+... ...++.++++|++|.++ ++.+++++.+.
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g----~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~ 75 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAG----ANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDE-IADMIAAAAAE 75 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHH-HHHHHHHHHHh
Confidence 6899999999999999999999999 899999999877766644433 24468899999999999 99999999887
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
++ ++|++||+||...+ ....+.+.+++++.+++|+.+++.+++.+++.|++. +.+++|++||..+.
T Consensus 76 ~~--~~d~vi~~a~~~~~-~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-----------~~~~~v~~ss~~~~ 141 (255)
T TIGR01963 76 FG--GLDILVNNAGIQHV-APIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQ-----------GWGRIINIASAHGL 141 (255)
T ss_pred cC--CCCEEEECCCCCCC-CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----------CCeEEEEEcchhhc
Confidence 76 59999999998754 556677889999999999999999999999999774 46789999998877
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC---------------------------C
Q psy11190 160 IEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS---------------------------N 212 (248)
Q Consensus 160 ~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~---------------------------~ 212 (248)
.+. +.+..|+.+|++++.+++.++.++.+++++++.++||+++|++... .
T Consensus 142 ~~~---~~~~~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (255)
T TIGR01963 142 VAS---PFKSAYVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVMLPGQPTK 218 (255)
T ss_pred CCC---CCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHHHHHHhhhcccCCCchHHHHHHHHccCccc
Confidence 665 6788999999999999999999998889999999999999886311 1
Q ss_pred CCCchhhHHHHHHHHhhhcccccccceeeeCCe
Q psy11190 213 APLEVGAATAGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
....++++++.++.++.+.....+|+.|.++|.
T Consensus 219 ~~~~~~d~a~~~~~~~~~~~~~~~g~~~~~~~g 251 (255)
T TIGR01963 219 RFVTVDEVAETALFLASDAAAGITGQAIVLDGG 251 (255)
T ss_pred cCcCHHHHHHHHHHHcCccccCccceEEEEcCc
Confidence 246789999999999987666778898888764
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-30 Score=215.44 Aligned_cols=207 Identities=26% Similarity=0.376 Sum_probs=170.5
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHH-hhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKD-ISDV 79 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~-i~~~ 79 (248)
|++++||||+||||++++++|+++| ++|++++|+.++. +. ...+.++.++++|+++.++ ++.++++ +.+.
T Consensus 1 ~~~vlItGasggiG~~ia~~l~~~G----~~v~~~~r~~~~~--~~--~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~~ 71 (243)
T PRK07023 1 AVRAIVTGHSRGLGAALAEQLLQPG----IAVLGVARSRHPS--LA--AAAGERLAEVELDLSDAAA-AAAWLAGDLLAA 71 (243)
T ss_pred CceEEEecCCcchHHHHHHHHHhCC----CEEEEEecCcchh--hh--hccCCeEEEEEeccCCHHH-HHHHHHHHHHHH
Confidence 7799999999999999999999999 8999999986531 11 1123468889999999998 8887766 5554
Q ss_pred hcC-CCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 80 VKD-QGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 80 ~~~-~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
+++ .++|++|||||...+..++.+.+.+++++.+++|+.+++.+++.+++.|.++ ..++||++||..+
T Consensus 72 ~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----------~~~~iv~isS~~~ 140 (243)
T PRK07023 72 FVDGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDA-----------AERRILHISSGAA 140 (243)
T ss_pred hccCCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhcc-----------CCCEEEEEeChhh
Confidence 432 3599999999987654567778899999999999999999999999999874 5689999999988
Q ss_pred cccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC---------------------CCCCch
Q psy11190 159 SIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS---------------------NAPLEV 217 (248)
Q Consensus 159 ~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~---------------------~~~~~~ 217 (248)
..+. +++..|+++|+++++|++.++.+ .++||+++.|+||+++|++... ....+|
T Consensus 141 ~~~~---~~~~~Y~~sK~a~~~~~~~~~~~-~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (243)
T PRK07023 141 RNAY---AGWSVYCATKAALDHHARAVALD-ANRALRIVSLAPGVVDTGMQATIRATDEERFPMRERFRELKASGALSTP 216 (243)
T ss_pred cCCC---CCchHHHHHHHHHHHHHHHHHhc-CCCCcEEEEecCCccccHHHHHHHhcccccchHHHHHHHhhhcCCCCCH
Confidence 7766 78889999999999999999999 7889999999999999987321 113578
Q ss_pred hhHHHHHHHHhhhc
Q psy11190 218 GAATAGIIQFIQSL 231 (248)
Q Consensus 218 ~~~~~~~~~~~~~~ 231 (248)
++++..++..+..+
T Consensus 217 ~~va~~~~~~l~~~ 230 (243)
T PRK07023 217 EDAARRLIAYLLSD 230 (243)
T ss_pred HHHHHHHHHHHhcc
Confidence 89988777666543
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.1e-30 Score=212.05 Aligned_cols=216 Identities=24% Similarity=0.327 Sum_probs=184.8
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|+++||||+|+||++++++|+++| ++|++++|+.+++.++.+......++.++++|+++.++ +..+++++.+.++
T Consensus 7 ~~ilItGatg~iG~~la~~l~~~g----~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~~~ 81 (237)
T PRK07326 7 KVALITGGSKGIGFAIAEALLAEG----YKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEAD-VQRAVDAIVAAFG 81 (237)
T ss_pred CEEEEECCCCcHHHHHHHHHHHCC----CEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHH-HHHHHHHHHHHcC
Confidence 689999999999999999999999 89999999988777664433333678899999999999 9999999988876
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+|||++|.... ..+.+.+.+++++.+++|+.+++.+++++++.+.+ +.+++|++||..+..+
T Consensus 82 --~~d~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~------------~~~~iv~~ss~~~~~~ 146 (237)
T PRK07326 82 --GLDVLIANAGVGHF-APVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKR------------GGGYIINISSLAGTNF 146 (237)
T ss_pred --CCCEEEECCCCCCC-CchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHH------------CCeEEEEECChhhccC
Confidence 59999999997654 66677899999999999999999999999999843 4689999999987765
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC------CCchhhHHHHHHHHhhhccccc
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA------PLEVGAATAGIIQFIQSLGEAH 235 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~ 235 (248)
. .+...|+++|+++.++++.++.++.+.|+++++|.||++.|++..... ..+++++++.+++++.......
T Consensus 147 ~---~~~~~y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~d~a~~~~~~l~~~~~~~ 223 (237)
T PRK07326 147 F---AGGAAYNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHTPSEKDAWKIQPEDIAQLVLDLLKMPPRTL 223 (237)
T ss_pred C---CCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCcccccccchhhhccCCHHHHHHHHHHHHhCCcccc
Confidence 5 677889999999999999999999989999999999999999865432 2578999999999998876555
Q ss_pred cccee
Q psy11190 236 NGGFF 240 (248)
Q Consensus 236 ~g~~~ 240 (248)
...+.
T Consensus 224 ~~~~~ 228 (237)
T PRK07326 224 PSKIE 228 (237)
T ss_pred ccceE
Confidence 54444
|
|
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-30 Score=218.31 Aligned_cols=185 Identities=28% Similarity=0.377 Sum_probs=162.8
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||+|+||++++++|+++| ++|++++|+.+.++++.+.. ..++.++++|++|.++ ++.+++++.+.++
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g----~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~-~~~~~~~~~~~~~ 75 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARG----DRVAATVRRPDALDDLKARY--GDRLWVLQLDVTDSAA-VRAVVDRAFAALG 75 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHhc--cCceEEEEccCCCHHH-HHHHHHHHHHHcC
Confidence 789999999999999999999999 89999999987766554332 3468899999999999 9999988887766
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+||||||.... ....+.+.+++++.+++|+.+++++++.++|.|+++ +.++||++||..+..+
T Consensus 76 --~id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-----------~~~~iv~~sS~~~~~~ 141 (276)
T PRK06482 76 --RIDVVVSNAGYGLF-GAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQ-----------GGGRIVQVSSEGGQIA 141 (276)
T ss_pred --CCCEEEECCCCCCC-cccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----------CCCEEEEEcCcccccC
Confidence 59999999998765 566677889999999999999999999999999875 4689999999887766
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCC
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGG 210 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~ 210 (248)
. ++...|+++|++++.|++.++.++.++||+++.+.||+++|++..
T Consensus 142 ~---~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~ 187 (276)
T PRK06482 142 Y---PGFSLYHATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGA 187 (276)
T ss_pred C---CCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcc
Confidence 5 778899999999999999999999999999999999999998753
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-30 Score=242.91 Aligned_cols=224 Identities=19% Similarity=0.235 Sum_probs=191.5
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHh-h--cCCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQ-Q--HSNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~-~--~~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
|++|||||++|||++++++|+++| ++|++++|+.+.++.+.+... . ..++.++++|++|.++ ++.+++++.+
T Consensus 415 kvvLVTGasggIG~aiA~~La~~G----a~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~-v~~a~~~i~~ 489 (676)
T TIGR02632 415 RVAFVTGGAGGIGRETARRLAAEG----AHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQA-VKAAFADVAL 489 (676)
T ss_pred CEEEEeCCCcHHHHHHHHHHHhCC----CEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHH-HHHHHHHHHH
Confidence 789999999999999999999999 899999999887776643332 1 2357789999999999 9999999998
Q ss_pred hhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 79 VVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
.++ ++|+||||||.... .++.+.+.++|+..+++|+.+++++++.+++.|.+++ ..++||++||..+
T Consensus 490 ~~g--~iDilV~nAG~~~~-~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~----------~~g~IV~iSS~~a 556 (676)
T TIGR02632 490 AYG--GVDIVVNNAGIATS-SPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQG----------LGGNIVFIASKNA 556 (676)
T ss_pred hcC--CCcEEEECCCCCCC-CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----------CCCEEEEEeChhh
Confidence 887 59999999998654 6777888999999999999999999999999998752 2578999999988
Q ss_pred cccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecC--CCCC-------------------------
Q psy11190 159 SIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTD--MGGS------------------------- 211 (248)
Q Consensus 159 ~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~--~~~~------------------------- 211 (248)
..+. ++...|+++|++++.|+++++.++.++||+||+|+||++.++ +...
T Consensus 557 ~~~~---~~~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 633 (676)
T TIGR02632 557 VYAG---KNASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRT 633 (676)
T ss_pred cCCC---CCCHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccchhhhhhcccCChHHHHHHHHhcC
Confidence 8776 778899999999999999999999999999999999998642 2110
Q ss_pred --CCCCchhhHHHHHHHHhhhcccccccceeeeCCee
Q psy11190 212 --NAPLEVGAATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 212 --~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
....+|+++++.++.++++.....+|+++.+||..
T Consensus 634 ~l~r~v~peDVA~av~~L~s~~~~~~TG~~i~vDGG~ 670 (676)
T TIGR02632 634 LLKRHIFPADIAEAVFFLASSKSEKTTGCIITVDGGV 670 (676)
T ss_pred CcCCCcCHHHHHHHHHHHhCCcccCCcCcEEEECCCc
Confidence 01257899999999998877778999999999864
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.8e-30 Score=212.11 Aligned_cols=222 Identities=22% Similarity=0.231 Sum_probs=189.8
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||+|+||++++++|+++| ++|++++|+.++..+..+... ...+.++.+|++|.++ ++.+++++.+.++
T Consensus 8 k~vlItGatg~iG~~la~~l~~~G----~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~-~~~~~~~~~~~~~ 81 (239)
T PRK12828 8 KVVAITGGFGGLGRATAAWLAARG----ARVALIGRGAAPLSQTLPGVP-ADALRIGGIDLVDPQA-ARRAVDEVNRQFG 81 (239)
T ss_pred CEEEEECCCCcHhHHHHHHHHHCC----CeEEEEeCChHhHHHHHHHHh-hcCceEEEeecCCHHH-HHHHHHHHHHHhC
Confidence 799999999999999999999999 899999999877655533222 2356778899999999 9999999998887
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+|||++|...+ ..+.+.+.+++++.+.+|+.+++.+++++++.+.++ +.++++++||..+..+
T Consensus 82 --~~d~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----------~~~~iv~~sS~~~~~~ 147 (239)
T PRK12828 82 --RLDALVNIAGAFVW-GTIADGDADTWDRMYGVNVKTTLNASKAALPALTAS-----------GGGRIVNIGAGAALKA 147 (239)
T ss_pred --CcCEEEECCcccCc-CChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhc-----------CCCEEEEECchHhccC
Confidence 59999999997654 556667889999999999999999999999999875 5789999999988776
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC-------CCchhhHHHHHHHHhhhcccc
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA-------PLEVGAATAGIIQFIQSLGEA 234 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~ 234 (248)
. +++..|+++|++++.+++.++.++.+.|++++.+.||+++|++..... ...++++++.++.++......
T Consensus 148 ~---~~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~~~~~~~~~~~~~~dva~~~~~~l~~~~~~ 224 (239)
T PRK12828 148 G---PGMGAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRADMPDADFSRWVTPEQIAAVIAFLLSDEAQA 224 (239)
T ss_pred C---CCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhcCCchhhhcCCCHHHHHHHHHHHhCccccc
Confidence 5 678899999999999999999999888999999999999998754322 245899999999999876667
Q ss_pred cccceeeeCCee
Q psy11190 235 HNGGFFEYTGKA 246 (248)
Q Consensus 235 ~~g~~~~~~g~~ 246 (248)
.+|+.+..+|..
T Consensus 225 ~~g~~~~~~g~~ 236 (239)
T PRK12828 225 ITGASIPVDGGV 236 (239)
T ss_pred ccceEEEecCCE
Confidence 789999988753
|
|
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.8e-31 Score=210.82 Aligned_cols=190 Identities=15% Similarity=0.236 Sum_probs=162.5
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhcC
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVKD 82 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~~ 82 (248)
+++||||++|||++++++|+++ ++|++.+|+.+ .+++|+++.++ ++.+++++ +
T Consensus 2 ~vlItGas~giG~~la~~l~~~-----~~vi~~~r~~~----------------~~~~D~~~~~~-~~~~~~~~----~- 54 (199)
T PRK07578 2 KILVIGASGTIGRAVVAELSKR-----HEVITAGRSSG----------------DVQVDITDPAS-IRALFEKV----G- 54 (199)
T ss_pred eEEEEcCCcHHHHHHHHHHHhc-----CcEEEEecCCC----------------ceEecCCChHH-HHHHHHhc----C-
Confidence 6999999999999999999965 47899998753 36899999998 88877653 3
Q ss_pred CCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcccc
Q psy11190 83 QGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIED 162 (248)
Q Consensus 83 ~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~~ 162 (248)
++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|.+ .++|+++||..+..+.
T Consensus 55 -~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-------------~g~iv~iss~~~~~~~ 119 (199)
T PRK07578 55 -KVDAVVSAAGKVHF-APLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLND-------------GGSFTLTSGILSDEPI 119 (199)
T ss_pred -CCCEEEECCCCCCC-CchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc-------------CCeEEEEcccccCCCC
Confidence 59999999997654 67778899999999999999999999999999964 5789999999987765
Q ss_pred cCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC------CCCCchhhHHHHHHHHhhhcccccc
Q psy11190 163 NTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS------NAPLEVGAATAGIIQFIQSLGEAHN 236 (248)
Q Consensus 163 ~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (248)
+++..|+++|+++++|+++++.|+ ++||+||+|+||+++|++... ....+++++++.++..+.. ..+
T Consensus 120 ---~~~~~Y~~sK~a~~~~~~~la~e~-~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~---~~~ 192 (199)
T PRK07578 120 ---PGGASAATVNGALEGFVKAAALEL-PRGIRINVVSPTVLTESLEKYGPFFPGFEPVPAARVALAYVRSVEG---AQT 192 (199)
T ss_pred ---CCchHHHHHHHHHHHHHHHHHHHc-cCCeEEEEEcCCcccCchhhhhhcCCCCCCCCHHHHHHHHHHHhcc---cee
Confidence 788899999999999999999999 889999999999999997421 2357899999998888864 466
Q ss_pred cceee
Q psy11190 237 GGFFE 241 (248)
Q Consensus 237 g~~~~ 241 (248)
|+.+.
T Consensus 193 g~~~~ 197 (199)
T PRK07578 193 GEVYK 197 (199)
T ss_pred eEEec
Confidence 66654
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.97 E-value=4e-30 Score=211.95 Aligned_cols=223 Identities=26% Similarity=0.357 Sum_probs=192.5
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHH-hhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALA-QQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|+++||||+++||++++++|+++| ++|++++|+.++.+...... ..+.++.++.+|++|.++ +..+++++.+.+
T Consensus 6 ~~ilItGasg~iG~~l~~~l~~~g----~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~~ 80 (246)
T PRK05653 6 KTALVTGASRGIGRAIALRLAADG----AKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAA-VRALIEAAVEAF 80 (246)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC----CEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHH-HHHHHHHHHHHh
Confidence 689999999999999999999999 88999999988776654333 335578899999999999 999999988877
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+ ++|++||++|.... ....+.+.++++..++.|+.+.+++++.+++.|.+. +.++||++||..+..
T Consensus 81 ~--~id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-----------~~~~ii~~ss~~~~~ 146 (246)
T PRK05653 81 G--ALDILVNNAGITRD-ALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKA-----------RYGRIVNISSVSGVT 146 (246)
T ss_pred C--CCCEEEECCCcCCC-CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----------CCcEEEEECcHHhcc
Confidence 6 59999999998765 666778889999999999999999999999999774 457999999988776
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC---------------CCCchhhHHHHHH
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN---------------APLEVGAATAGII 225 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~---------------~~~~~~~~~~~~~ 225 (248)
+. .++..|+.+|++++.+++++++++.+.|++++++.||.+++++.... ...+++++++.++
T Consensus 147 ~~---~~~~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~ 223 (246)
T PRK05653 147 GN---PGQTNYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEGLPEEVKAEILKEIPLGRLGQPEEVANAVA 223 (246)
T ss_pred CC---CCCcHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence 65 67788999999999999999999988899999999999999986521 1245699999999
Q ss_pred HHhhhcccccccceeeeCCee
Q psy11190 226 QFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 226 ~~~~~~~~~~~g~~~~~~g~~ 246 (248)
.++.......+|.++.++|..
T Consensus 224 ~~~~~~~~~~~g~~~~~~gg~ 244 (246)
T PRK05653 224 FLASDAASYITGQVIPVNGGM 244 (246)
T ss_pred HHcCchhcCccCCEEEeCCCe
Confidence 999877777899999999865
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-30 Score=244.07 Aligned_cols=207 Identities=28% Similarity=0.324 Sum_probs=179.3
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHH-HHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|+++||||++|||++++++|+++| ++|++++|+.+.++++.+ +...+.++.++++|++|.++ ++++++++.+.+
T Consensus 372 k~vlItGas~giG~~la~~l~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~~~~~~~ 446 (657)
T PRK07201 372 KVVLITGASSGIGRATAIKVAEAG----ATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAA-VDHTVKDILAEH 446 (657)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHH-HHHHHHHHHHhc
Confidence 689999999999999999999999 899999999988777743 33335578899999999999 999999999888
Q ss_pred cCCCccEEEeccccCCccccCCCC--ChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLL--KPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
+ ++|++|||||.... ..+.+. +.+++++.+++|+.+++.+++.++|.|+++ +.++||++||..+
T Consensus 447 g--~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-----------~~g~iv~isS~~~ 512 (657)
T PRK07201 447 G--HVDYLVNNAGRSIR-RSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRER-----------RFGHVVNVSSIGV 512 (657)
T ss_pred C--CCCEEEECCCCCCC-CChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhc-----------CCCEEEEECChhh
Confidence 7 59999999997643 222222 257899999999999999999999999875 5689999999988
Q ss_pred cccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC------CCCchhhHHHHHHHHhhh
Q psy11190 159 SIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN------APLEVGAATAGIIQFIQS 230 (248)
Q Consensus 159 ~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~------~~~~~~~~~~~~~~~~~~ 230 (248)
..+. ++...|+++|+++++|+++++.|+.++||+|++|+||+++|+|..+. ...+|+++++.++..+..
T Consensus 513 ~~~~---~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~a~~i~~~~~~ 587 (657)
T PRK07201 513 QTNA---PRFSAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPTKRYNNVPTISPEEAADMVVRAIVE 587 (657)
T ss_pred cCCC---CCcchHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCccccccCCCCCCHHHHHHHHHHHHHh
Confidence 8766 77889999999999999999999999999999999999999997642 246899999999998755
|
|
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=6e-30 Score=211.13 Aligned_cols=224 Identities=25% Similarity=0.338 Sum_probs=188.9
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchh-HHHHHH-HHhhcCCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDK-AVELLA-LAQQHSNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~-~~~~~~-~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
||++|||||+|+||++++++|+++| ++|++..|+.++ .+.+.. ......++.++.+|+++.++ ++.+++++.+
T Consensus 6 ~~~vlItGasg~iG~~l~~~l~~~g----~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-v~~~~~~~~~ 80 (249)
T PRK12825 6 GRVALVTGAARGLGRAIALRLARAG----ADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAA-LEAAVAAAVE 80 (249)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCC----CeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHH-HHHHHHHHHH
Confidence 5789999999999999999999999 888776665443 333332 22334578899999999999 9999999888
Q ss_pred hhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 79 VVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
.++ ++|++||+||...+ ..+.+.+.++++..+++|+.+.+++++.+++.+.+. +.++++++||..+
T Consensus 81 ~~~--~id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----------~~~~~i~~SS~~~ 146 (249)
T PRK12825 81 RFG--RIDILVNNAGIFED-KPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQ-----------RGGRIVNISSVAG 146 (249)
T ss_pred HcC--CCCEEEECCccCCC-CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----------CCCEEEEECcccc
Confidence 766 59999999997654 667778899999999999999999999999999875 4679999999988
Q ss_pred cccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC---------------CCchhhHHHH
Q psy11190 159 SIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA---------------PLEVGAATAG 223 (248)
Q Consensus 159 ~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~---------------~~~~~~~~~~ 223 (248)
..+. .+...|+.+|+++++|++.++.++.+.|++++.++||+++|++..... ..+++++++.
T Consensus 147 ~~~~---~~~~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~ 223 (249)
T PRK12825 147 LPGW---PGRSNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATIEEAREAKDAETPLGRSGTPEDIARA 223 (249)
T ss_pred CCCC---CCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccccchhHHhhhccCCCCCCcCHHHHHHH
Confidence 8665 678899999999999999999999989999999999999999865421 2367899999
Q ss_pred HHHHhhhcccccccceeeeCCee
Q psy11190 224 IIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 224 ~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
+..++.......+|++|.++|..
T Consensus 224 ~~~~~~~~~~~~~g~~~~i~~g~ 246 (249)
T PRK12825 224 VAFLCSDASDYITGQVIEVTGGV 246 (249)
T ss_pred HHHHhCccccCcCCCEEEeCCCE
Confidence 99998776677899999988763
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.5e-30 Score=212.68 Aligned_cols=215 Identities=26% Similarity=0.293 Sum_probs=182.2
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|+++|||++++||+++++.|+++| ++|++++|+.++++++.+.. ...++.+|+++.++ +..+++. .+
T Consensus 10 ~~~lItGa~g~iG~~~a~~l~~~g----~~V~~~~r~~~~~~~~~~~~----~~~~~~~D~~~~~~-v~~~~~~----~~ 76 (245)
T PRK07060 10 KSVLVTGASSGIGRACAVALAQRG----ARVVAAARNAAALDRLAGET----GCEPLRLDVGDDAA-IRAALAA----AG 76 (245)
T ss_pred CEEEEeCCcchHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHh----CCeEEEecCCCHHH-HHHHHHH----hC
Confidence 689999999999999999999999 89999999987766543322 35678899999887 7776554 23
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|++|||||.... ....+.+.+++++.+.+|+.+++.+++++++.+.++. ..++||++||..+..+
T Consensus 77 --~~d~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~----------~~~~iv~~sS~~~~~~ 143 (245)
T PRK07060 77 --AFDGLVNCAGIASL-ESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAG----------RGGSIVNVSSQAALVG 143 (245)
T ss_pred --CCCEEEECCCCCCC-CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC----------CCcEEEEEccHHHcCC
Confidence 59999999998754 5566678899999999999999999999999987631 2489999999988877
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC-----------------CCCCchhhHHHHH
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS-----------------NAPLEVGAATAGI 224 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~-----------------~~~~~~~~~~~~~ 224 (248)
. ++...|+++|++++.+++.++.++.+.||+++++.||+++|++.+. .....++++++.+
T Consensus 144 ~---~~~~~y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~ 220 (245)
T PRK07060 144 L---PDHLAYCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSDPQKSGPMLAAIPLGRFAEVDDVAAPI 220 (245)
T ss_pred C---CCCcHhHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccCHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence 6 7788999999999999999999999899999999999999997432 1135789999999
Q ss_pred HHHhhhcccccccceeeeCCe
Q psy11190 225 IQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 225 ~~~~~~~~~~~~g~~~~~~g~ 245 (248)
+.+++......+|+++.++|.
T Consensus 221 ~~l~~~~~~~~~G~~~~~~~g 241 (245)
T PRK07060 221 LFLLSDAASMVSGVSLPVDGG 241 (245)
T ss_pred HHHcCcccCCccCcEEeECCC
Confidence 999988778889999999985
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.6e-30 Score=213.71 Aligned_cols=222 Identities=25% Similarity=0.340 Sum_probs=187.4
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||+|+||++++++|+++| ++|++++|+.+..+++.+..... ++.++.+|++|.++ ++.+++++.+.++
T Consensus 12 ~~vlItGa~g~iG~~~a~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~-~~~~~~~~~~~~~ 85 (264)
T PRK12829 12 LRVLVTGGASGIGRAIAEAFAEAG----ARVHVCDVSEAALAATAARLPGA-KVTATVADVADPAQ-VERVFDTAVERFG 85 (264)
T ss_pred CEEEEeCCCCcHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHHhcC-ceEEEEccCCCHHH-HHHHHHHHHHHhC
Confidence 689999999999999999999999 89999999987666554333222 56889999999999 9999999998876
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCC-ceEEEeecCCCcc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSR-AAIVNVSSIMGSI 160 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~-~~iv~vss~~~~~ 160 (248)
++|+|||+||...+.......+.+++++.+++|+.+++++++.+++.+... +. ++|+++||..+..
T Consensus 86 --~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----------~~~~~vv~~ss~~~~~ 152 (264)
T PRK12829 86 --GLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKAS-----------GHGGVIIALSSVAGRL 152 (264)
T ss_pred --CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-----------CCCeEEEEeccccccc
Confidence 599999999987444667778899999999999999999999999988764 33 6799999888776
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC--------------------------CC
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN--------------------------AP 214 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~--------------------------~~ 214 (248)
+. +++..|+.+|++++.+++.++.++.+.+++++++.||+++|++.... ..
T Consensus 153 ~~---~~~~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (264)
T PRK12829 153 GY---PGRTPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEKISLGRM 229 (264)
T ss_pred CC---CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhhhhhccCCChhHHHHHHHhcCCCCCC
Confidence 65 67788999999999999999999988899999999999999875321 13
Q ss_pred CchhhHHHHHHHHhhhcccccccceeeeCCe
Q psy11190 215 LEVGAATAGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
..++++++.++.++.......+|+.+.++|.
T Consensus 230 ~~~~d~a~~~~~l~~~~~~~~~g~~~~i~~g 260 (264)
T PRK12829 230 VEPEDIAATALFLASPAARYITGQAISVDGN 260 (264)
T ss_pred CCHHHHHHHHHHHcCccccCccCcEEEeCCC
Confidence 5689999998888766556678988888875
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.8e-30 Score=212.23 Aligned_cols=216 Identities=23% Similarity=0.331 Sum_probs=177.6
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCc-hhHHHHH-HHHhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNK-DKAVELL-ALAQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~-~~~~~~~-~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|++|||||+++||++++++|+++| ++|++..|+. +...... .+...+.++.++.+|+++.++ +..+++++.+.
T Consensus 7 ~~vlitGasg~iG~~l~~~l~~~g----~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~ 81 (252)
T PRK06077 7 KVVVVTGSGRGIGRAIAVRLAKEG----SLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREG-CETLAKATIDR 81 (252)
T ss_pred cEEEEeCCCChHHHHHHHHHHHCC----CEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHH-HHHHHHHHHHH
Confidence 799999999999999999999999 8888776543 3333332 222223467789999999999 99999999988
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
++ ++|+||||||...+ .++.+.+.++++..+++|+.+++.+++.+.+.|.+ .+++|++||.++.
T Consensus 82 ~~--~~d~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-------------~~~iv~~sS~~~~ 145 (252)
T PRK06077 82 YG--VADILVNNAGLGLF-SPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMRE-------------GGAIVNIASVAGI 145 (252)
T ss_pred cC--CCCEEEECCCCCCC-CChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhc-------------CcEEEEEcchhcc
Confidence 76 59999999998655 56667788889999999999999999999999864 4789999999988
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC-------------------CCCchhhH
Q psy11190 160 IEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN-------------------APLEVGAA 220 (248)
Q Consensus 160 ~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~-------------------~~~~~~~~ 220 (248)
.+. +++..|+++|+++++|++.++.++.+ +|+++.|.||+++|++.... ...+|+++
T Consensus 146 ~~~---~~~~~Y~~sK~~~~~~~~~l~~~~~~-~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv 221 (252)
T PRK06077 146 RPA---YGLSIYGAMKAAVINLTKYLALELAP-KIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAEKFTLMGKILDPEEV 221 (252)
T ss_pred CCC---CCchHHHHHHHHHHHHHHHHHHHHhc-CCEEEEEeeCCccChHHHhhhhcccccHHHHHHhcCcCCCCCCHHHH
Confidence 766 77889999999999999999999988 99999999999999974221 12678999
Q ss_pred HHHHHHHhhhcccccccceeeeCC
Q psy11190 221 TAGIIQFIQSLGEAHNGGFFEYTG 244 (248)
Q Consensus 221 ~~~~~~~~~~~~~~~~g~~~~~~g 244 (248)
++.++.++.. ...+|..+..++
T Consensus 222 a~~~~~~~~~--~~~~g~~~~i~~ 243 (252)
T PRK06077 222 AEFVAAILKI--ESITGQVFVLDS 243 (252)
T ss_pred HHHHHHHhCc--cccCCCeEEecC
Confidence 9999998864 344566555554
|
|
| >COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.9e-30 Score=212.24 Aligned_cols=186 Identities=31% Similarity=0.447 Sum_probs=159.2
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchh--HHHHHHHHhhc--CCceeEEeeccC-CchhhhhHHHH
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDK--AVELLALAQQH--SNLHVIELDVTD-FSKQQDVLFKD 75 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~--~~~~~~~~~~~--~~~~~~~~D~~~-~~~~v~~~~~~ 75 (248)
+|+++||||++|||+++|+.|+++| ++|++..++.+. .+.+.+..... ..+.+..+|+++ .++ ++.+++.
T Consensus 5 ~~~ilITGas~GiG~aia~~l~~~G----~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~-v~~~~~~ 79 (251)
T COG1028 5 GKVALVTGASSGIGRAIARALAREG----ARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEES-VEALVAA 79 (251)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCC----CeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHH-HHHHHHH
Confidence 5799999999999999999999999 898888887664 33332222212 367788899998 888 9999999
Q ss_pred hhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeec
Q psy11190 76 ISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSS 155 (248)
Q Consensus 76 i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss 155 (248)
+.+.+| ++|++|||||......++.+.+.++|++.+.+|+.+++.+++.+.|.+.+ . +||++||
T Consensus 80 ~~~~~g--~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~------------~--~Iv~isS 143 (251)
T COG1028 80 AEEEFG--RIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKK------------Q--RIVNISS 143 (251)
T ss_pred HHHHcC--CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhh------------C--eEEEECC
Confidence 999987 59999999998754236788889999999999999999999988888873 3 8999999
Q ss_pred CCCcccccCCCC-CccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC
Q psy11190 156 IMGSIEDNTQGG-FHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS 211 (248)
Q Consensus 156 ~~~~~~~~~~~~-~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~ 211 (248)
..+. +. ++ +..|++||+++.+|++.++.|+.++||++++|+||+++|++.+.
T Consensus 144 ~~~~-~~---~~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~~~~~ 196 (251)
T COG1028 144 VAGL-GG---PPGQAAYAASKAALIGLTKALALELAPRGIRVNAVAPGYIDTPMTAA 196 (251)
T ss_pred chhc-CC---CCCcchHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCcchhh
Confidence 9998 65 55 58999999999999999999999999999999999999999764
|
|
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-30 Score=202.21 Aligned_cols=163 Identities=34% Similarity=0.529 Sum_probs=147.4
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecC--chhHHHH-HHHHhhcCCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRN--KDKAVEL-LALAQQHSNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~--~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
|+++||||++|||++++++|+++|+ .+|++++|+ .+..+++ .++...+.++.++++|+++.++ ++++++++.+
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~---~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~ 76 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGA---RVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPES-IRALIEEVIK 76 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTT---EEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHH-HHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCc---eEEEEeeeccccccccccccccccccccccccccccccccc-cccccccccc
Confidence 7999999999999999999999974 799999999 5556666 3444456789999999999999 9999999998
Q ss_pred hhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 79 VVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
.++ ++|++|||||...+ .++.+.+.++|++.|++|+.+++++.+.++| + +.++||++||.++
T Consensus 77 ~~~--~ld~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~---~------------~~g~iv~~sS~~~ 138 (167)
T PF00106_consen 77 RFG--PLDILINNAGIFSD-GSLDDLSEEELERVFRVNLFGPFLLAKALLP---Q------------GGGKIVNISSIAG 138 (167)
T ss_dssp HHS--SESEEEEECSCTTS-BSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH---H------------TTEEEEEEEEGGG
T ss_pred ccc--cccccccccccccc-cccccccchhhhhccccccceeeeeeehhee---c------------cccceEEecchhh
Confidence 877 59999999999885 8888889999999999999999999999999 2 6899999999999
Q ss_pred cccccCCCCCccchhhHHHHHHHHHHHHhhc
Q psy11190 159 SIEDNTQGGFHPYRCSKAALNAATRSLSIDL 189 (248)
Q Consensus 159 ~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~ 189 (248)
..+. +++..|+++|+++.+|+++|+.|+
T Consensus 139 ~~~~---~~~~~Y~askaal~~~~~~la~e~ 166 (167)
T PF00106_consen 139 VRGS---PGMSAYSASKAALRGLTQSLAAEL 166 (167)
T ss_dssp TSSS---TTBHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCC---CCChhHHHHHHHHHHHHHHHHHhc
Confidence 9887 889999999999999999999986
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-29 Score=236.55 Aligned_cols=224 Identities=21% Similarity=0.271 Sum_probs=194.0
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|+++||||+||||++++++|+++| ++|++++|+.+.++.+.+......++.++.+|+++.++ ++.+++++.+.++
T Consensus 423 k~vLVTGasggIG~~la~~L~~~G----a~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~-v~~~~~~~~~~~g 497 (681)
T PRK08324 423 KVALVTGAAGGIGKATAKRLAAEG----ACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAA-VQAAFEEAALAFG 497 (681)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCc----CEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHH-HHHHHHHHHHHcC
Confidence 789999999999999999999999 89999999988877664443323578899999999999 9999999988876
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+||||||.... .++.+.+.++|+..+++|+.+++.+++.+++.|++++ ..++||++||..+..+
T Consensus 498 --~iDvvI~~AG~~~~-~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~----------~~g~iV~vsS~~~~~~ 564 (681)
T PRK08324 498 --GVDIVVSNAGIAIS-GPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQG----------LGGSIVFIASKNAVNP 564 (681)
T ss_pred --CCCEEEECCCCCCC-CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC----------CCcEEEEECCccccCC
Confidence 59999999998765 7777889999999999999999999999999998752 2489999999998877
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcce--ecCCCCCC---------------------------
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWV--KTDMGGSN--------------------------- 212 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v--~t~~~~~~--------------------------- 212 (248)
. ++...|+++|++++.+++.++.++.++||+||.|+||++ .|++....
T Consensus 565 ~---~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~ 641 (681)
T PRK08324 565 G---PNFGAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEWIEARAAAYGLSEEELEEFYRARNLLK 641 (681)
T ss_pred C---CCcHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccchhhhhhhhhccCChHHHHHHHHhcCCcC
Confidence 6 778899999999999999999999999999999999999 78764321
Q ss_pred CCCchhhHHHHHHHHhhhcccccccceeeeCCee
Q psy11190 213 APLEVGAATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
....+++++..++.+++......+|+.+.++|..
T Consensus 642 ~~v~~~DvA~a~~~l~s~~~~~~tG~~i~vdgG~ 675 (681)
T PRK08324 642 REVTPEDVAEAVVFLASGLLSKTTGAIITVDGGN 675 (681)
T ss_pred CccCHHHHHHHHHHHhCccccCCcCCEEEECCCc
Confidence 1356899999999988766677899999998864
|
|
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-29 Score=206.64 Aligned_cols=221 Identities=26% Similarity=0.363 Sum_probs=186.2
Q ss_pred EEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCc-hhHHHHH-HHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 4 ILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNK-DKAVELL-ALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 4 ~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~-~~~~~~~-~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
+||||++++||++++++|+++| ++|++++|+. +..+... .+...+.++.++++|++|.++ ++.+++.+.+.++
T Consensus 1 vlItG~~g~iG~~la~~l~~~G----~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~~~ 75 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEG----AKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDRED-VKAVVEEIEEELG 75 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCC----CEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHH-HHHHHHHHHHHhC
Confidence 5899999999999999999999 8999998875 3344442 333334468899999999999 9999999988776
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+|||++|.... ..+.+.+.+++++.+++|+.+.+.+++.+.+.+.+. +.++++++||..+..+
T Consensus 76 --~id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----------~~~~~v~~sS~~~~~g 141 (239)
T TIGR01830 76 --PIDILVNNAGITRD-NLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQ-----------RSGRIINISSVVGLMG 141 (239)
T ss_pred --CCCEEEECCCCCCC-CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----------CCeEEEEECCccccCC
Confidence 59999999998754 556677889999999999999999999999998764 4679999999988877
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC---------------CCchhhHHHHHHH
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA---------------PLEVGAATAGIIQ 226 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~---------------~~~~~~~~~~~~~ 226 (248)
. +++..|+++|++++.+++.++.++.+.|++++.+.||+++|++..... ..+++++++.++.
T Consensus 142 ~---~~~~~y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 218 (239)
T TIGR01830 142 N---AGQANYAASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDMTDKLSEKVKKKILSQIPLGRFGTPEEVANAVAF 218 (239)
T ss_pred C---CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhhhcChHHHHHHHhcCCcCCCcCHHHHHHHHHH
Confidence 6 778899999999999999999999889999999999999998754321 3468899999998
Q ss_pred HhhhcccccccceeeeCCee
Q psy11190 227 FIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 227 ~~~~~~~~~~g~~~~~~g~~ 246 (248)
++.......+|+++++++..
T Consensus 219 ~~~~~~~~~~g~~~~~~~g~ 238 (239)
T TIGR01830 219 LASDEASYITGQVIHVDGGM 238 (239)
T ss_pred HhCcccCCcCCCEEEeCCCc
Confidence 88766667899999988754
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.6e-29 Score=207.20 Aligned_cols=216 Identities=23% Similarity=0.290 Sum_probs=171.9
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCch-hHHHHHH-HHhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKD-KAVELLA-LAQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~-~~~~~~~-~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|+++||||+||||++++++|+++| ++|++++|+.+ ..+.+.. +...+.++.++++|+++.++ +..+++++.+.
T Consensus 7 k~vlItGasggiG~~l~~~l~~~G----~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~ 81 (248)
T PRK07806 7 KTALVTGSSRGIGADTAKILAGAG----AHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEES-VAALMDTAREE 81 (248)
T ss_pred cEEEEECCCCcHHHHHHHHHHHCC----CEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHH-HHHHHHHHHHh
Confidence 789999999999999999999999 89999999754 3444432 32224467889999999999 99999998887
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
++ ++|++|||||.... . ..+++..+++|+.+++++++.+.|.|.+ .+++|++||..+.
T Consensus 82 ~~--~~d~vi~~ag~~~~-~------~~~~~~~~~vn~~~~~~l~~~~~~~~~~-------------~~~iv~isS~~~~ 139 (248)
T PRK07806 82 FG--GLDALVLNASGGME-S------GMDEDYAMRLNRDAQRNLARAALPLMPA-------------GSRVVFVTSHQAH 139 (248)
T ss_pred CC--CCcEEEECCCCCCC-C------CCCcceeeEeeeHHHHHHHHHHHhhccC-------------CceEEEEeCchhh
Confidence 76 59999999986432 1 1235678999999999999999998853 4789999996553
Q ss_pred c-cc-cCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC-----------------CCCchhhH
Q psy11190 160 I-ED-NTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN-----------------APLEVGAA 220 (248)
Q Consensus 160 ~-~~-~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~-----------------~~~~~~~~ 220 (248)
. +. .+.+.+..|+++|++++.+++.++.+++++||+|++|.||+++|++.... ...+|+++
T Consensus 140 ~~~~~~~~~~~~~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv 219 (248)
T PRK07806 140 FIPTVKTMPEYEPVARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTATLLNRLNPGAIEARREAAGKLYTVSEF 219 (248)
T ss_pred cCccccCCccccHHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhhhhccCCHHHHHHHHhhhcccCCHHHH
Confidence 2 11 12244678999999999999999999999999999999999998764321 23589999
Q ss_pred HHHHHHHhhhcccccccceeeeCCee
Q psy11190 221 TAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 221 ~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
++.++.+++. ...+|+.+...|..
T Consensus 220 a~~~~~l~~~--~~~~g~~~~i~~~~ 243 (248)
T PRK07806 220 AAEVARAVTA--PVPSGHIEYVGGAD 243 (248)
T ss_pred HHHHHHHhhc--cccCccEEEecCcc
Confidence 9999999984 45688888777754
|
|
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.5e-29 Score=205.94 Aligned_cols=219 Identities=21% Similarity=0.274 Sum_probs=183.0
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|+++||||+++||.++++.|+++| ++|++.+|+.++..++.+.....+++.++++|+++.++ +..+++++.+.++
T Consensus 6 ~~vlItGa~g~iG~~~a~~l~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-~~~~~~~~~~~~~ 80 (238)
T PRK05786 6 KKVAIIGVSEGLGYAVAYFALKEG----AQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTES-ARNVIEKAAKVLN 80 (238)
T ss_pred cEEEEECCCchHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHH-HHHHHHHHHHHhC
Confidence 599999999999999999999999 89999999988776664433334578899999999999 9999999888776
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|.+|+++|.... ..+. +.+++++.+++|+.+++.+.+.++|.+.+ .+++|++||..+...
T Consensus 81 --~id~ii~~ag~~~~-~~~~--~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-------------~~~iv~~ss~~~~~~ 142 (238)
T PRK05786 81 --AIDGLVVTVGGYVE-DTVE--EFSGLEEMLTNHIKIPLYAVNASLRFLKE-------------GSSIVLVSSMSGIYK 142 (238)
T ss_pred --CCCEEEEcCCCcCC-CchH--HHHHHHHHHHHhchHHHHHHHHHHHHHhc-------------CCEEEEEecchhccc
Confidence 59999999987543 3333 34889999999999999999999999854 578999999876542
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC----------CCCCchhhHHHHHHHHhhhc
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS----------NAPLEVGAATAGIIQFIQSL 231 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~----------~~~~~~~~~~~~~~~~~~~~ 231 (248)
. .+....|+++|++++.+++.++.++.++||+++.|.||+++|++... ....+++++++.++.++...
T Consensus 143 ~--~~~~~~Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~~~~~ 220 (238)
T PRK05786 143 A--SPDQLSYAVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDFEPERNWKKLRKLGDDMAPPEDFAKVIIWLLTDE 220 (238)
T ss_pred C--CCCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCchhhhhhhccccCCCCCHHHHHHHHHHHhccc
Confidence 2 25677899999999999999999999999999999999999987532 12468899999999999876
Q ss_pred ccccccceeeeCCe
Q psy11190 232 GEAHNGGFFEYTGK 245 (248)
Q Consensus 232 ~~~~~g~~~~~~g~ 245 (248)
....+|.++.++|.
T Consensus 221 ~~~~~g~~~~~~~~ 234 (238)
T PRK05786 221 ADWVDGVVIPVDGG 234 (238)
T ss_pred ccCccCCEEEECCc
Confidence 66788998888875
|
|
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-29 Score=207.92 Aligned_cols=207 Identities=16% Similarity=0.201 Sum_probs=172.3
Q ss_pred EEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhcCCC
Q psy11190 5 LITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVKDQG 84 (248)
Q Consensus 5 lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~~~~ 84 (248)
+||||++|||++++++|+++| ++|++++|+.++++.+.+......++.++.+|+++.++ ++.+++++ + +
T Consensus 1 lItGas~~iG~~~a~~l~~~G----~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-~~~~~~~~----~--~ 69 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEG----ARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAA-VDAFFAEA----G--P 69 (230)
T ss_pred CeecCCChHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHH-HHHHHHhc----C--C
Confidence 699999999999999999999 89999999987766654433334578899999999998 88877653 3 5
Q ss_pred ccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcccccC
Q psy11190 85 LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNT 164 (248)
Q Consensus 85 iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~~~~ 164 (248)
+|+||||+|...+ .++.+.+.+++++.+++|+.+++++++ ++.+. +.++||++||..+..+.
T Consensus 70 id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~--~~~~~-------------~~g~iv~~ss~~~~~~~-- 131 (230)
T PRK07041 70 FDHVVITAADTPG-GPVRALPLAAAQAAMDSKFWGAYRVAR--AARIA-------------PGGSLTFVSGFAAVRPS-- 131 (230)
T ss_pred CCEEEECCCCCCC-CChhhCCHHHHHHHHHHHHHHHHHHHh--hhhhc-------------CCeEEEEECchhhcCCC--
Confidence 9999999998765 667778899999999999999999999 33332 36899999999988776
Q ss_pred CCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC-------------------CCCchhhHHHHHH
Q psy11190 165 QGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN-------------------APLEVGAATAGII 225 (248)
Q Consensus 165 ~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~-------------------~~~~~~~~~~~~~ 225 (248)
++...|+++|+++++|+++++.|+.+ ||+++++||+++|++.... ....|+++++.++
T Consensus 132 -~~~~~Y~~sK~a~~~~~~~la~e~~~--irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~ 208 (230)
T PRK07041 132 -ASGVLQGAINAALEALARGLALELAP--VRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAERLPARRVGQPEDVANAIL 208 (230)
T ss_pred -CcchHHHHHHHHHHHHHHHHHHHhhC--ceEEEEeecccccHHHHhhhccchHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence 77889999999999999999999975 9999999999999875321 0135899999999
Q ss_pred HHhhhcccccccceeeeCCe
Q psy11190 226 QFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 226 ~~~~~~~~~~~g~~~~~~g~ 245 (248)
.++++ ...+|+.+..+|.
T Consensus 209 ~l~~~--~~~~G~~~~v~gg 226 (230)
T PRK07041 209 FLAAN--GFTTGSTVLVDGG 226 (230)
T ss_pred HHhcC--CCcCCcEEEeCCC
Confidence 98875 4578888888874
|
|
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-28 Score=203.83 Aligned_cols=219 Identities=26% Similarity=0.326 Sum_probs=178.5
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCch-hHHHHHHHHhh--cCCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKD-KAVELLALAQQ--HSNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~-~~~~~~~~~~~--~~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
|++|||||+|+||++++++|+++| +.|++++|+.+ ..+++...... ...+.++.+|++|.++ +..+++++.+
T Consensus 7 ~~vlItGa~g~iG~~l~~~l~~~g----~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-~~~~~~~~~~ 81 (249)
T PRK09135 7 KVALITGGARRIGAAIARTLHAAG----YRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDA-LPELVAACVA 81 (249)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC----CEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHH-HHHHHHHHHH
Confidence 689999999999999999999999 89999998643 34444322221 2357889999999999 9999999988
Q ss_pred hhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 79 VVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
.++ ++|+||||||...+ .++.+.+.++++..+++|+.+++++++++.+.+.+ ..+.++++++..+
T Consensus 82 ~~~--~~d~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~------------~~~~~~~~~~~~~ 146 (249)
T PRK09135 82 AFG--RLDALVNNASSFYP-TPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRK------------QRGAIVNITDIHA 146 (249)
T ss_pred HcC--CCCEEEECCCCCCC-CChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhh------------CCeEEEEEeChhh
Confidence 877 59999999998765 56667788899999999999999999999999876 3578888888666
Q ss_pred cccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC----------------CCchhhHHH
Q psy11190 159 SIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA----------------PLEVGAATA 222 (248)
Q Consensus 159 ~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~----------------~~~~~~~~~ 222 (248)
..+. ++...|+.+|++++.+++.++.++.+ +++++++.||+++||+..... ..+++++++
T Consensus 147 ~~~~---~~~~~Y~~sK~~~~~~~~~l~~~~~~-~i~~~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~ 222 (249)
T PRK09135 147 ERPL---KGYPVYCAAKAALEMLTRSLALELAP-EVRVNAVAPGAILWPEDGNSFDEEARQAILARTPLKRIGTPEDIAE 222 (249)
T ss_pred cCCC---CCchhHHHHHHHHHHHHHHHHHHHCC-CCeEEEEEeccccCccccccCCHHHHHHHHhcCCcCCCcCHHHHHH
Confidence 5554 67889999999999999999999865 799999999999999854311 246889999
Q ss_pred HHHHHhhhcccccccceeeeCCe
Q psy11190 223 GIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 223 ~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
.++.++.+ ....+|+.|..++.
T Consensus 223 ~~~~~~~~-~~~~~g~~~~i~~g 244 (249)
T PRK09135 223 AVRFLLAD-ASFITGQILAVDGG 244 (249)
T ss_pred HHHHHcCc-cccccCcEEEECCC
Confidence 98776654 34468887777654
|
|
| >KOG1014|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=5e-29 Score=205.21 Aligned_cols=206 Identities=19% Similarity=0.290 Sum_probs=176.1
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhc-C-CceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQH-S-NLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
+.++|||||.|||++.|++||++| .+|++++|++++++.+.+.+.+. + .+.++.+|.++.++ .++++.+.
T Consensus 50 ~WAVVTGaTDGIGKayA~eLAkrG----~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~----~ye~i~~~ 121 (312)
T KOG1014|consen 50 SWAVVTGATDGIGKAYARELAKRG----FNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDE----VYEKLLEK 121 (312)
T ss_pred CEEEEECCCCcchHHHHHHHHHcC----CEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCch----hHHHHHHH
Confidence 468999999999999999999999 99999999999999995444433 3 57889999998775 33444444
Q ss_pred hcCCCccEEEeccccCCc-cccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 80 VKDQGLNVLVNNAGIAAK-FTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
+....+-+||||+|...+ +..+.+.+.+.+++.+.+|..+...+++.++|-|.++ ++|.|++++|.++
T Consensus 122 l~~~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r-----------~~G~IvnigS~ag 190 (312)
T KOG1014|consen 122 LAGLDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVER-----------KKGIIVNIGSFAG 190 (312)
T ss_pred hcCCceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcC-----------CCceEEEeccccc
Confidence 433348899999999873 3667777777999999999999999999999999986 7899999999999
Q ss_pred cccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC----CCchhhHHHHHHHHhh
Q psy11190 159 SIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA----PLEVGAATAGIIQFIQ 229 (248)
Q Consensus 159 ~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~----~~~~~~~~~~~~~~~~ 229 (248)
..+. +.+..|+++|+.+..|+++|..|++.+||.|-+|.|..|-|.|..... ..+|+.-++..+..+.
T Consensus 191 ~~p~---p~~s~ysasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~~~~~~sl~~ps~~tfaksal~tiG 262 (312)
T KOG1014|consen 191 LIPT---PLLSVYSASKAFVDFFSRCLQKEYESKGIFVQSVIPYLVATKMAKYRKPSLFVPSPETFAKSALNTIG 262 (312)
T ss_pred cccC---hhHHHHHHHHHHHHHHHHHHHHHHHhcCeEEEEeehhheeccccccCCCCCcCcCHHHHHHHHHhhcC
Confidence 9888 999999999999999999999999999999999999999999975543 4678888887777665
|
|
| >KOG1210|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.5e-29 Score=205.81 Aligned_cols=209 Identities=23% Similarity=0.240 Sum_probs=186.2
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhh---cCCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQ---HSNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
+.++|||+++|||+++|+.+..+| +.|.+..|+.+++.++...++- ..++.+..+|++|.++ +..+++++++
T Consensus 34 ~hi~itggS~glgl~la~e~~~~g----a~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~-v~~~~~~l~~ 108 (331)
T KOG1210|consen 34 RHILITGGSSGLGLALALECKREG----ADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDS-VSKVIEELRD 108 (331)
T ss_pred ceEEEecCcchhhHHHHHHHHHcc----CceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHH-HHHHHhhhhh
Confidence 368999999999999999999999 8999999999998888544332 2346799999999999 9999999998
Q ss_pred hhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 79 VVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
..+ .+|.+|||||...+ +.+++.+.++++..+++|+.++++++++.++.|+++. ..|+|+.++|.++
T Consensus 109 ~~~--~~d~l~~cAG~~v~-g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~----------~~g~I~~vsS~~a 175 (331)
T KOG1210|consen 109 LEG--PIDNLFCCAGVAVP-GLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKRE----------HLGRIILVSSQLA 175 (331)
T ss_pred ccC--CcceEEEecCcccc-cccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccc----------cCcEEEEehhhhh
Confidence 877 69999999999887 9999999999999999999999999999999999863 3679999999999
Q ss_pred cccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC---------------CCchhhHHHH
Q psy11190 159 SIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA---------------PLEVGAATAG 223 (248)
Q Consensus 159 ~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~---------------~~~~~~~~~~ 223 (248)
..+. .+++.|+++|+|+.+++..++.|+.++||+|...+|+.+.||....+. ..++|+.++.
T Consensus 176 ~~~i---~GysaYs~sK~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~En~tkP~~t~ii~g~ss~~~~e~~a~~ 252 (331)
T KOG1210|consen 176 MLGI---YGYSAYSPSKFALRGLAEALRQELIKYGVHVTLYYPPDTLTPGFERENKTKPEETKIIEGGSSVIKCEEMAKA 252 (331)
T ss_pred hcCc---ccccccccHHHHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCccccccccCchheeeecCCCCCcCHHHHHHH
Confidence 9998 899999999999999999999999999999999999999999653321 4679999999
Q ss_pred HHHHhhhc
Q psy11190 224 IIQFIQSL 231 (248)
Q Consensus 224 ~~~~~~~~ 231 (248)
++.-+...
T Consensus 253 ~~~~~~rg 260 (331)
T KOG1210|consen 253 IVKGMKRG 260 (331)
T ss_pred HHhHHhhc
Confidence 98877664
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-28 Score=202.67 Aligned_cols=199 Identities=26% Similarity=0.379 Sum_probs=171.9
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCc-eEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPA-HIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|+++||||+|+||+++|+.|+++| + +|++++|+.+++++ ...++.++.+|++|.++ ++.+++.+
T Consensus 7 ~~vlItGgsg~iG~~la~~l~~~G----~~~V~~~~r~~~~~~~------~~~~~~~~~~D~~~~~~-~~~~~~~~---- 71 (238)
T PRK08264 7 KVVLVTGANRGIGRAFVEQLLARG----AAKVYAAARDPESVTD------LGPRVVPLQLDVTDPAS-VAAAAEAA---- 71 (238)
T ss_pred CEEEEECCCchHHHHHHHHHHHCC----cccEEEEecChhhhhh------cCCceEEEEecCCCHHH-HHHHHHhc----
Confidence 589999999999999999999999 7 99999999766443 34578899999999988 77766543
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+ ++|+|||++|.......+.+.+.+++++.+++|+.+++.+++.+++.+.+. +.++++++||..+..
T Consensus 72 ~--~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----------~~~~~v~~sS~~~~~ 138 (238)
T PRK08264 72 S--DVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAAN-----------GGGAIVNVLSVLSWV 138 (238)
T ss_pred C--CCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----------CCCEEEEEcChhhcc
Confidence 3 499999999984434677788999999999999999999999999998875 578999999998877
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC--CCCchhhHHHHHHHHhhhc
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN--APLEVGAATAGIIQFIQSL 231 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~ 231 (248)
+. ++...|+.+|++++.|++.++.++.++|++++++.||.++|++.... ...++++++..++..+...
T Consensus 139 ~~---~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~~~~~~~~~~~~~a~~~~~~~~~~ 208 (238)
T PRK08264 139 NF---PNLGTYSASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAAGLDAPKASPADVARQILDALEAG 208 (238)
T ss_pred CC---CCchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCcccccccccCCcCCCCHHHHHHHHHHHHhCC
Confidence 66 77889999999999999999999999999999999999999986543 2577899999999888764
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.4e-29 Score=206.26 Aligned_cols=181 Identities=29% Similarity=0.325 Sum_probs=156.1
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHh-hcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQ-QHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
||++|||||+||||++++++|+++| ++|++++|+.+.++++.+... ...++.++++|++|.++ +..+++
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G----~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~----- 71 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKG----HNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAID-RAQAAE----- 71 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHH-HHHHhc-----
Confidence 4789999999999999999999999 899999999877666644332 24468899999999887 555432
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
.++|+||||||.... .++.+.+.++++..+++|+.+++.+++.+++.+.++ +.++||++||..+.
T Consensus 72 ---~~id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----------~~~~iv~~SS~~~~ 136 (257)
T PRK09291 72 ---WDVDVLLNNAGIGEA-GAVVDIPVELVRELFETNVFGPLELTQGFVRKMVAR-----------GKGKVVFTSSMAGL 136 (257)
T ss_pred ---CCCCEEEECCCcCCC-cCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----------CCceEEEEcChhhc
Confidence 149999999998765 677788999999999999999999999999999875 45899999999887
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCC
Q psy11190 160 IEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMG 209 (248)
Q Consensus 160 ~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~ 209 (248)
.+. ++...|+++|++++.+++.++.++.+.||+++.|+||+++|++.
T Consensus 137 ~~~---~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t~~~ 183 (257)
T PRK09291 137 ITG---PFTGAYCASKHALEAIAEAMHAELKPFGIQVATVNPGPYLTGFN 183 (257)
T ss_pred cCC---CCcchhHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccch
Confidence 765 67789999999999999999999999999999999999999874
|
|
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.8e-28 Score=202.63 Aligned_cols=207 Identities=28% Similarity=0.381 Sum_probs=175.7
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|+++||||+|+||+++++.|+++| ++|++++|+.++++.+.+ ..+..+++|++|.++ +..+++.+.+..+
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g----~~v~~~~r~~~~~~~~~~-----~~~~~~~~D~~~~~~-~~~~~~~i~~~~~ 72 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRG----YRVLAACRKPDDVARMNS-----LGFTGILLDLDDPES-VERAADEVIALTD 72 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCC----CEEEEEeCCHHHhHHHHh-----CCCeEEEeecCCHHH-HHHHHHHHHHhcC
Confidence 689999999999999999999999 899999999876654422 246789999999988 8888888876542
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
+++|.+|||+|...+ .++.+.+.+++++.+++|+.+++++++.+++.+.+. +.++++++||..+..+
T Consensus 73 -~~~~~ii~~ag~~~~-~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-----------~~~~iv~~ss~~~~~~ 139 (256)
T PRK08017 73 -NRLYGLFNNAGFGVY-GPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPH-----------GEGRIVMTSSVMGLIS 139 (256)
T ss_pred -CCCeEEEECCCCCCc-cchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc-----------CCCEEEEEcCcccccC
Confidence 259999999997654 667788999999999999999999999999999875 4678999999988766
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC-----------------CCCchhhHHHHH
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN-----------------APLEVGAATAGI 224 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~-----------------~~~~~~~~~~~~ 224 (248)
. ++...|+++|++++.++++++.++.+++++++.|.||+++|++.... ....++++++.+
T Consensus 140 ~---~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~ 216 (256)
T PRK08017 140 T---PGRGAYAASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQTQSDKPVENPGIAARFTLGPEAVVPKL 216 (256)
T ss_pred C---CCccHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchhhcccchhhccchhhhHHHhhcCCCHHHHHHHH
Confidence 5 77889999999999999999999999999999999999999875421 125799999999
Q ss_pred HHHhhhcccc
Q psy11190 225 IQFIQSLGEA 234 (248)
Q Consensus 225 ~~~~~~~~~~ 234 (248)
...+......
T Consensus 217 ~~~~~~~~~~ 226 (256)
T PRK08017 217 RHALESPKPK 226 (256)
T ss_pred HHHHhCCCCC
Confidence 9988765433
|
|
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-27 Score=197.11 Aligned_cols=197 Identities=18% Similarity=0.157 Sum_probs=147.3
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|+++||||++|||++++++|+++| ++|++++|+..+..+ ... .....++.+|+++.++ +. +.++
T Consensus 15 k~~lITGas~gIG~ala~~l~~~G----~~Vi~~~r~~~~~~~--~~~--~~~~~~~~~D~~~~~~-~~-------~~~~ 78 (245)
T PRK12367 15 KRIGITGASGALGKALTKAFRAKG----AKVIGLTHSKINNSE--SND--ESPNEWIKWECGKEES-LD-------KQLA 78 (245)
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCC----CEEEEEECCchhhhh--hhc--cCCCeEEEeeCCCHHH-HH-------HhcC
Confidence 789999999999999999999999 899999998632111 111 1123578899998877 43 2344
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+||||||... ..+.+.+++++.+++|+.+++++++.++|.|.++.. ...+.+++.+|.++..
T Consensus 79 --~iDilVnnAG~~~----~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~--------~~g~~iiv~ss~a~~~- 143 (245)
T PRK12367 79 --SLDVLILNHGINP----GGRQDPENINKALEINALSSWRLLELFEDIALNNNS--------QIPKEIWVNTSEAEIQ- 143 (245)
T ss_pred --CCCEEEECCccCC----cCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccc--------CCCeEEEEEecccccC-
Confidence 4999999999743 234678999999999999999999999999976310 0123344445555433
Q ss_pred ccCCCCCccchhhHHHHHHHH---HHHHhhccCCCeEEEEecCcceecCCCCCCCCCchhhHHHHHHHHhhhccc
Q psy11190 162 DNTQGGFHPYRCSKAALNAAT---RSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQSLGE 233 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~---~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (248)
. +....|++||+++..+. +.++.|+.+.|++|+.+.||+++|++.. ....+|+++++.++..+.....
T Consensus 144 ~---~~~~~Y~aSKaal~~~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~~~-~~~~~~~~vA~~i~~~~~~~~~ 214 (245)
T PRK12367 144 P---ALSPSYEISKRLIGQLVSLKKNLLDKNERKKLIIRKLILGPFRSELNP-IGIMSADFVAKQILDQANLGLY 214 (245)
T ss_pred C---CCCchhHHHHHHHHHHHHHHHHHHHhhcccccEEEEecCCCcccccCc-cCCCCHHHHHHHHHHHHhcCCc
Confidence 2 34678999999986543 4555566788999999999999999854 3357899999999999976443
|
|
| >KOG1204|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-28 Score=192.77 Aligned_cols=221 Identities=21% Similarity=0.227 Sum_probs=167.8
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHH-HhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLAL-AQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|++|+||+|.|||..++..+.+++ ......+++...++ +..+ ...++.......|+++..- ...+++..+...
T Consensus 7 ~villTGaSrgiG~~~v~~i~aed----~e~~r~g~~r~~a~-~~~L~v~~gd~~v~~~g~~~e~~~-l~al~e~~r~k~ 80 (253)
T KOG1204|consen 7 KVILLTGASRGIGTGSVATILAED----DEALRYGVARLLAE-LEGLKVAYGDDFVHVVGDITEEQL-LGALREAPRKKG 80 (253)
T ss_pred eEEEEecCCCCccHHHHHHHHhcc----hHHHHHhhhccccc-ccceEEEecCCcceechHHHHHHH-HHHHHhhhhhcC
Confidence 578999999999999999888877 33333333322222 1111 0111233334455665554 566666666655
Q ss_pred cCCCccEEEeccccCCccccCC--CCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLG--LLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
+ ..|++|||||...+..... .-+.++|.+.|++|+++.+.+.+.++|.+++++ ..+.+||+||.++
T Consensus 81 g--kr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p----------~~~~vVnvSS~aa 148 (253)
T KOG1204|consen 81 G--KRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSP----------VNGNVVNVSSLAA 148 (253)
T ss_pred C--ceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCC----------ccCeEEEecchhh
Confidence 5 5999999999988755444 678899999999999999999999999999852 3689999999999
Q ss_pred cccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC---------------------CCch
Q psy11190 159 SIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA---------------------PLEV 217 (248)
Q Consensus 159 ~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~---------------------~~~~ 217 (248)
..++ .+|.+||++|+|.++|++.||.|=. .+|++.++.||++||+|..... ..+|
T Consensus 149 v~p~---~~wa~yc~~KaAr~m~f~~lA~EEp-~~v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l~~f~el~~~~~ll~~ 224 (253)
T KOG1204|consen 149 VRPF---SSWAAYCSSKAARNMYFMVLASEEP-FDVRVLNYAPGVVDTQMQVCIRETSRMTPADLKMFKELKESGQLLDP 224 (253)
T ss_pred hccc---cHHHHhhhhHHHHHHHHHHHhhcCc-cceeEEEccCCcccchhHHHHhhccCCCHHHHHHHHHHHhcCCcCCh
Confidence 9888 9999999999999999999998843 6999999999999999853311 3567
Q ss_pred hhHHHHHHHHhhhcccccccceeeeCCe
Q psy11190 218 GAATAGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
..-++.+..++.... -.+|++++|+-+
T Consensus 225 ~~~a~~l~~L~e~~~-f~sG~~vdy~D~ 251 (253)
T KOG1204|consen 225 QVTAKVLAKLLEKGD-FVSGQHVDYYDE 251 (253)
T ss_pred hhHHHHHHHHHHhcC-cccccccccccc
Confidence 777888888777754 789999988754
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.7e-26 Score=185.32 Aligned_cols=199 Identities=27% Similarity=0.361 Sum_probs=165.7
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
||+++||||+|+||++++++|+++ ++|++++|+.++.+++.+. ...+.++++|++|.++ ++++++.+.
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-----~~V~~~~r~~~~~~~~~~~---~~~~~~~~~D~~~~~~-~~~~~~~~~--- 70 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-----HTLLLGGRPAERLDELAAE---LPGATPFPVDLTDPEA-IAAAVEQLG--- 70 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-----CCEEEEeCCHHHHHHHHHH---hccceEEecCCCCHHH-HHHHHHhcC---
Confidence 479999999999999999999975 3699999987765544322 2357889999999888 777766542
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
++|+|||++|.... ....+.+.+++++.+++|+.+.+.+++.+++.+.+ ..++++++||..+..
T Consensus 71 ---~id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~------------~~~~~v~~ss~~~~~ 134 (227)
T PRK08219 71 ---RLDVLVHNAGVADL-GPVAESTVDEWRATLEVNVVAPAELTRLLLPALRA------------AHGHVVFINSGAGLR 134 (227)
T ss_pred ---CCCEEEECCCcCCC-CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh------------CCCeEEEEcchHhcC
Confidence 49999999998654 66677788999999999999999999999999887 357899999998876
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC-----------CCCCchhhHHHHHHHHhh
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS-----------NAPLEVGAATAGIIQFIQ 229 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~-----------~~~~~~~~~~~~~~~~~~ 229 (248)
+. +++..|+.+|++++.+++.++.++... +++++|+||++++++... .....++++++.++..+.
T Consensus 135 ~~---~~~~~y~~~K~a~~~~~~~~~~~~~~~-i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~l~ 210 (227)
T PRK08219 135 AN---PGWGSYAASKFALRALADALREEEPGN-VRVTSVHPGRTDTDMQRGLVAQEGGEYDPERYLRPETVAKAVRFAVD 210 (227)
T ss_pred cC---CCCchHHHHHHHHHHHHHHHHHHhcCC-ceEEEEecCCccchHhhhhhhhhccccCCCCCCCHHHHHHHHHHHHc
Confidence 65 778899999999999999999988766 999999999999886431 113679999999999987
Q ss_pred hc
Q psy11190 230 SL 231 (248)
Q Consensus 230 ~~ 231 (248)
..
T Consensus 211 ~~ 212 (227)
T PRK08219 211 AP 212 (227)
T ss_pred CC
Confidence 63
|
|
| >COG0623 FabI Enoyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.8e-26 Score=177.64 Aligned_cols=221 Identities=22% Similarity=0.229 Sum_probs=191.6
Q ss_pred ceEEEecCC--CchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCN--RGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas--~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|++||+|-. ..|+..||+.|.++| +.+..+..++.-.++..++.+..+...+++||+++.++ ++.+++.+.+.
T Consensus 7 K~~lI~Gvan~rSIAwGIAk~l~~~G----AeL~fTy~~e~l~krv~~la~~~~s~~v~~cDV~~d~~-i~~~f~~i~~~ 81 (259)
T COG0623 7 KRILIMGVANNRSIAWGIAKALAEQG----AELAFTYQGERLEKRVEELAEELGSDLVLPCDVTNDES-IDALFATIKKK 81 (259)
T ss_pred ceEEEEEecccccHHHHHHHHHHHcC----CEEEEEeccHHHHHHHHHHHhhccCCeEEecCCCCHHH-HHHHHHHHHHh
Confidence 789999976 789999999999999 89999988873333335666555567889999999999 99999999999
Q ss_pred hcCCCccEEEeccccCCc---cccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecC
Q psy11190 80 VKDQGLNVLVNNAGIAAK---FTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSI 156 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~ 156 (248)
+| ++|.|||+-++.+. .+.+-+.+.|.|...+++..++...+++++.|+|.. +|.++.+|-.
T Consensus 82 ~g--~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~-------------ggSiltLtYl 146 (259)
T COG0623 82 WG--KLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNN-------------GGSILTLTYL 146 (259)
T ss_pred hC--cccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCC-------------CCcEEEEEec
Confidence 99 69999999998863 245667899999999999999999999999999974 7889999988
Q ss_pred CCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC-----------------CCCchhh
Q psy11190 157 MGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN-----------------APLEVGA 219 (248)
Q Consensus 157 ~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~-----------------~~~~~~~ 219 (248)
.+.... |.+..++.+|+++++-+|-||.+++++|||||.|+-||++|--.... ...+.|+
T Consensus 147 gs~r~v---PnYNvMGvAKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAasgI~~f~~~l~~~e~~aPl~r~vt~ee 223 (259)
T COG0623 147 GSERVV---PNYNVMGVAKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAASGIGDFRKMLKENEANAPLRRNVTIEE 223 (259)
T ss_pred cceeec---CCCchhHHHHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhhccccHHHHHHHHHhhCCccCCCCHHH
Confidence 777766 88889999999999999999999999999999999999999532221 1467999
Q ss_pred HHHHHHHHhhhcccccccceeeeCCe
Q psy11190 220 ATAGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 220 ~~~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
+.+...+++++.++..+|..+.+|+.
T Consensus 224 VG~tA~fLlSdLssgiTGei~yVD~G 249 (259)
T COG0623 224 VGNTAAFLLSDLSSGITGEIIYVDSG 249 (259)
T ss_pred hhhhHHHHhcchhcccccceEEEcCC
Confidence 99999999999999999999988864
|
|
| >PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.5e-26 Score=191.13 Aligned_cols=188 Identities=23% Similarity=0.195 Sum_probs=155.2
Q ss_pred HHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhcCCCccEEEeccccCC
Q psy11190 17 MIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAA 96 (248)
Q Consensus 17 ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~~~~iD~lv~~ag~~~ 96 (248)
+|++|+++| ++|++++|+.++.+ ...++++|++|.++ ++.+++++. + ++|+||||||...
T Consensus 1 ~a~~l~~~G----~~Vv~~~r~~~~~~----------~~~~~~~Dl~~~~~-v~~~~~~~~---~--~iD~li~nAG~~~ 60 (241)
T PRK12428 1 TARLLRFLG----ARVIGVDRREPGMT----------LDGFIQADLGDPAS-IDAAVAALP---G--RIDALFNIAGVPG 60 (241)
T ss_pred ChHHHHhCC----CEEEEEeCCcchhh----------hhHhhcccCCCHHH-HHHHHHHhc---C--CCeEEEECCCCCC
Confidence 478999999 89999999876532 12467899999999 888887764 3 5999999999752
Q ss_pred ccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcccc--------------
Q psy11190 97 KFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIED-------------- 162 (248)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~~-------------- 162 (248)
.+.+++.+++|+.+++++++.++|.|.+ .|+||++||.++...+
T Consensus 61 ---------~~~~~~~~~vN~~~~~~l~~~~~~~~~~-------------~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~ 118 (241)
T PRK12428 61 ---------TAPVELVARVNFLGLRHLTEALLPRMAP-------------GGAIVNVASLAGAEWPQRLELHKALAATAS 118 (241)
T ss_pred ---------CCCHHHhhhhchHHHHHHHHHHHHhccC-------------CcEEEEeCcHHhhccccchHHHHhhhccch
Confidence 1357899999999999999999999853 4899999999886311
Q ss_pred ----------cCCCCCccchhhHHHHHHHHHHHH-hhccCCCeEEEEecCcceecCCCCCC-----------------CC
Q psy11190 163 ----------NTQGGFHPYRCSKAALNAATRSLS-IDLKGDKIIATAMHPGWVKTDMGGSN-----------------AP 214 (248)
Q Consensus 163 ----------~~~~~~~~y~~sK~a~~~~~~~la-~e~~~~~i~v~~v~PG~v~t~~~~~~-----------------~~ 214 (248)
.+.+++..|+++|+++++|++.++ .+++++|||||+|+||+++|+|.+.. ..
T Consensus 119 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (241)
T PRK12428 119 FDEGAAWLAAHPVALATGYQLSKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGDFRSMLGQERVDSDAKRMGRP 198 (241)
T ss_pred HHHHHHhhhccCCCcccHHHHHHHHHHHHHHHHHHHhhhccCeEEEEeecCCccCcccccchhhhhhHhhhhcccccCCC
Confidence 123667899999999999999999 99999999999999999999986421 02
Q ss_pred CchhhHHHHHHHHhhhcccccccceeeeCCee
Q psy11190 215 LEVGAATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
.+|+++++.++.++++.....+|+.+.++|..
T Consensus 199 ~~pe~va~~~~~l~s~~~~~~~G~~i~vdgg~ 230 (241)
T PRK12428 199 ATADEQAAVLVFLCSDAARWINGVNLPVDGGL 230 (241)
T ss_pred CCHHHHHHHHHHHcChhhcCccCcEEEecCch
Confidence 47999999999998877778999999999863
|
|
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.7e-25 Score=191.64 Aligned_cols=198 Identities=19% Similarity=0.230 Sum_probs=149.8
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
+|+++||||+||||++++++|+++| ++|++++|+.+++++... .....+..+.+|++|.++ +.. .+
T Consensus 178 gK~VLITGASgGIG~aLA~~La~~G----~~Vi~l~r~~~~l~~~~~--~~~~~v~~v~~Dvsd~~~-v~~-------~l 243 (406)
T PRK07424 178 GKTVAVTGASGTLGQALLKELHQQG----AKVVALTSNSDKITLEIN--GEDLPVKTLHWQVGQEAA-LAE-------LL 243 (406)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHh--hcCCCeEEEEeeCCCHHH-HHH-------Hh
Confidence 4789999999999999999999999 899999998765543211 112346788999999777 443 23
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+ ++|++|||||.... .+.+.+++++.+++|+.+++.+++.++|.|++++.. ...+.++++|+ +. .
T Consensus 244 ~--~IDiLInnAGi~~~----~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~-------~~~~iiVn~Ss-a~-~ 308 (406)
T PRK07424 244 E--KVDILIINHGINVH----GERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDK-------ATKEVWVNTSE-AE-V 308 (406)
T ss_pred C--CCCEEEECCCcCCC----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-------CCCeEEEEEcc-cc-c
Confidence 3 49999999997532 356889999999999999999999999999875210 01245566654 33 2
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCCCCchhhHHHHHHHHhhhcccc
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQSLGEA 234 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (248)
.+ +..+.|++||+|+..|++ ++++. .++.|..+.||+++|++.. ....+||++++.++..++...+.
T Consensus 309 ~~---~~~~~Y~ASKaAl~~l~~-l~~~~--~~~~I~~i~~gp~~t~~~~-~~~~spe~vA~~il~~i~~~~~~ 375 (406)
T PRK07424 309 NP---AFSPLYELSKRALGDLVT-LRRLD--APCVVRKLILGPFKSNLNP-IGVMSADWVAKQILKLAKRDFRN 375 (406)
T ss_pred cC---CCchHHHHHHHHHHHHHH-HHHhC--CCCceEEEEeCCCcCCCCc-CCCCCHHHHHHHHHHHHHCCCCE
Confidence 22 345689999999999985 44443 4577778889999999853 34679999999999999876553
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.2e-23 Score=215.03 Aligned_cols=181 Identities=17% Similarity=0.137 Sum_probs=152.6
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCch-----------------------------------------
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKD----------------------------------------- 40 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~----------------------------------------- 40 (248)
|++|||||++|||.++|++|++++ +++|++++|+..
T Consensus 1998 ~vvLVTGGarGIG~aiA~~LA~~~---ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~ 2074 (2582)
T TIGR02813 1998 DVFLVTGGAKGVTFECALELAKQC---QAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVR 2074 (2582)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHhc---CCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhccc
Confidence 689999999999999999999983 189999999820
Q ss_pred ------hHHHH-HHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhcCCCccEEEeccccCCccccCCCCChhhhhhee
Q psy11190 41 ------KAVEL-LALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHF 113 (248)
Q Consensus 41 ------~~~~~-~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~ 113 (248)
+..+. .++...+..+.++.+|++|.++ ++++++.+.+. + ++|+||||||+... +.+.+.+.++|++.|
T Consensus 2075 ~~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~a-v~~av~~v~~~-g--~IDgVVhnAGv~~~-~~i~~~t~e~f~~v~ 2149 (2582)
T TIGR02813 2075 PVLSSLEIAQALAAFKAAGASAEYASADVTNSVS-VAATVQPLNKT-L--QITGIIHGAGVLAD-KHIQDKTLEEFNAVY 2149 (2582)
T ss_pred ccchhHHHHHHHHHHHhcCCcEEEEEccCCCHHH-HHHHHHHHHHh-C--CCcEEEECCccCCC-CCcccCCHHHHHHHH
Confidence 00011 1222234578899999999999 99999999876 3 59999999998876 788899999999999
Q ss_pred eecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCC
Q psy11190 114 LVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDK 193 (248)
Q Consensus 114 ~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~ 193 (248)
++|+.|.+++++.+.+.+ .++||++||.++.++. +++..|+++|++++.|++.++.++. +
T Consensus 2150 ~~nv~G~~~Ll~al~~~~---------------~~~IV~~SSvag~~G~---~gqs~YaaAkaaL~~la~~la~~~~--~ 2209 (2582)
T TIGR02813 2150 GTKVDGLLSLLAALNAEN---------------IKLLALFSSAAGFYGN---TGQSDYAMSNDILNKAALQLKALNP--S 2209 (2582)
T ss_pred HHHHHHHHHHHHHHHHhC---------------CCeEEEEechhhcCCC---CCcHHHHHHHHHHHHHHHHHHHHcC--C
Confidence 999999999988876642 3569999999999887 8889999999999999999999874 4
Q ss_pred eEEEEecCcceecCCCC
Q psy11190 194 IIATAMHPGWVKTDMGG 210 (248)
Q Consensus 194 i~v~~v~PG~v~t~~~~ 210 (248)
++|++|+||+++|+|..
T Consensus 2210 irV~sI~wG~wdtgm~~ 2226 (2582)
T TIGR02813 2210 AKVMSFNWGPWDGGMVN 2226 (2582)
T ss_pred cEEEEEECCeecCCccc
Confidence 99999999999999864
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.90 E-value=7.5e-23 Score=159.76 Aligned_cols=175 Identities=23% Similarity=0.266 Sum_probs=143.7
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH----HHHHhhcCCceeEEeeccCCchhhhhHHHHhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL----LALAQQHSNLHVIELDVTDFSKQQDVLFKDIS 77 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~----~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~ 77 (248)
|+++||||+++||.+++++|+++|+ ..|++.+|+.+..+.. .++...+.++.++.+|+++.++ +..+++++.
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~---~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~ 76 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGA---RHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAA-LAAALAAIP 76 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhC---CeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHH-HHHHHHHHH
Confidence 5799999999999999999999993 3688888876543322 2333334577889999999888 889888888
Q ss_pred hhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCC
Q psy11190 78 DVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIM 157 (248)
Q Consensus 78 ~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~ 157 (248)
..++ ++|.|||++|.... ..+.+.+.++++..+++|+.+++++.+.+.+. +.++++++||..
T Consensus 77 ~~~~--~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~---------------~~~~ii~~ss~~ 138 (180)
T smart00822 77 ARLG--PLRGVIHAAGVLDD-GLLANLTPERFAAVLAPKVDGAWNLHELTRDL---------------PLDFFVLFSSVA 138 (180)
T ss_pred HHcC--CeeEEEEccccCCc-cccccCCHHHHHHhhchHhHHHHHHHHHhccC---------------CcceEEEEccHH
Confidence 7666 59999999998654 56677888999999999999999999987331 457899999998
Q ss_pred CcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCccee
Q psy11190 158 GSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVK 205 (248)
Q Consensus 158 ~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~ 205 (248)
+..+. +++..|+++|+++..|++.++ +.++++..+.||+++
T Consensus 139 ~~~~~---~~~~~y~~sk~~~~~~~~~~~----~~~~~~~~~~~g~~~ 179 (180)
T smart00822 139 GVLGN---PGQANYAAANAFLDALAAHRR----ARGLPATSINWGAWA 179 (180)
T ss_pred HhcCC---CCchhhHHHHHHHHHHHHHHH----hcCCceEEEeecccc
Confidence 88776 778899999999999998776 467889999999875
|
It uses NADPH to reduce the keto group to a hydroxy group. |
| >KOG1478|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.3e-21 Score=156.31 Aligned_cols=196 Identities=28% Similarity=0.358 Sum_probs=162.8
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCC-CCceEEEeecCchhHHHH-HHHHhhcC----CceeEEeeccCCchhhhhHHH
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNN-QPAHIFATCRNKDKAVEL-LALAQQHS----NLHVIELDVTDFSKQQDVLFK 74 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~-~~~~V~~~~r~~~~~~~~-~~~~~~~~----~~~~~~~D~~~~~~~v~~~~~ 74 (248)
+|++||||++||||.+++++|++..+. +..++++.+|+.+++++. ..+....+ .+.++++|+++..+ +-++.+
T Consensus 3 RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~S-v~~A~~ 81 (341)
T KOG1478|consen 3 RKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQS-VFRASK 81 (341)
T ss_pred ceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHH-HHHHHH
Confidence 378999999999999999999987641 346788999999999887 55555444 57789999999999 999999
Q ss_pred HhhhhhcCCCccEEEeccccCCccccC---------------------------CCCChhhhhheeeecchhhHHHHHHH
Q psy11190 75 DISDVVKDQGLNVLVNNAGIAAKFTRL---------------------------GLLKPEQMTDHFLVNVTAPLMLTKTM 127 (248)
Q Consensus 75 ~i~~~~~~~~iD~lv~~ag~~~~~~~~---------------------------~~~~~~~~~~~~~~n~~~~~~l~~~~ 127 (248)
++.+++. ++|.++.|||++.. ..+ ...+.+++...|+.|++|+|.+.+.+
T Consensus 82 di~~rf~--~ld~iylNAg~~~~-~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l 158 (341)
T KOG1478|consen 82 DIKQRFQ--RLDYIYLNAGIMPN-PGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIREL 158 (341)
T ss_pred HHHHHhh--hccEEEEccccCCC-CcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhh
Confidence 9999998 59999999998753 111 12456788899999999999999999
Q ss_pred hHHHHhhhhcccCCCCCCCCceEEEeecCCCccccc------CCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecC
Q psy11190 128 LPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDN------TQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHP 201 (248)
Q Consensus 128 ~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~~~------~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~P 201 (248)
.|++..+ .+..+|.+||..+.-... ...+-..|..||.+.+-+.-++.+.+.+.|+..+++.|
T Consensus 159 ~pll~~~-----------~~~~lvwtSS~~a~kk~lsleD~q~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~p 227 (341)
T KOG1478|consen 159 EPLLCHS-----------DNPQLVWTSSRMARKKNLSLEDFQHSKGKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQP 227 (341)
T ss_pred hhHhhcC-----------CCCeEEEEeecccccccCCHHHHhhhcCCCCcchhHHHHHHHHHHHhccccccchhhhcccC
Confidence 9999986 455899999988765431 11245679999999999999999999999999999999
Q ss_pred cceecCCCCC
Q psy11190 202 GWVKTDMGGS 211 (248)
Q Consensus 202 G~v~t~~~~~ 211 (248)
|..-|.+...
T Consensus 228 g~~tt~~~~~ 237 (341)
T KOG1478|consen 228 GIFTTNSFSE 237 (341)
T ss_pred ceeecchhhh
Confidence 9998887544
|
|
| >PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.4e-21 Score=153.32 Aligned_cols=173 Identities=19% Similarity=0.220 Sum_probs=134.3
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCch---hHHHH-HHHHhhcCCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKD---KAVEL-LALAQQHSNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~---~~~~~-~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
++|||||++|||..+++.|++++. .+|++++|+.. ...+. .++...+.++.++++|++|.++ ++++++.+.+
T Consensus 2 tylitGG~gglg~~la~~La~~~~---~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~-v~~~~~~~~~ 77 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGA---RRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEA-VAAALAQLRQ 77 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT----SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHH-HHHHHHTSHT
T ss_pred EEEEECCccHHHHHHHHHHHHcCC---CEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHH-HHHHHHHHHh
Confidence 799999999999999999999996 89999999932 22223 5555556789999999999999 9999999998
Q ss_pred hhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 79 VVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
.++ ++|.|||+||.... ..+.+.+.++++..+...+.+..++.+.+.+. +-..+|++||+++
T Consensus 78 ~~~--~i~gVih~ag~~~~-~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~---------------~l~~~i~~SSis~ 139 (181)
T PF08659_consen 78 RFG--PIDGVIHAAGVLAD-APIQDQTPDEFDAVLAPKVRGLWNLHEALENR---------------PLDFFILFSSISS 139 (181)
T ss_dssp TSS---EEEEEE--------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTT---------------TTSEEEEEEEHHH
T ss_pred ccC--Ccceeeeeeeeecc-cccccCCHHHHHHHHhhhhhHHHHHHHHhhcC---------------CCCeEEEECChhH
Confidence 886 69999999999876 78889999999999999999999998887662 4567999999999
Q ss_pred cccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcce
Q psy11190 159 SIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWV 204 (248)
Q Consensus 159 ~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v 204 (248)
..+. +++..|+++.+.++.|++..+. .|.++.+|..|..
T Consensus 140 ~~G~---~gq~~YaaAN~~lda~a~~~~~----~g~~~~sI~wg~W 178 (181)
T PF08659_consen 140 LLGG---PGQSAYAAANAFLDALARQRRS----RGLPAVSINWGAW 178 (181)
T ss_dssp HTT----TTBHHHHHHHHHHHHHHHHHHH----TTSEEEEEEE-EB
T ss_pred hccC---cchHhHHHHHHHHHHHHHHHHh----CCCCEEEEEcccc
Confidence 9988 8999999999999999987764 3567888887764
|
It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B .... |
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.8e-20 Score=167.39 Aligned_cols=190 Identities=14% Similarity=0.129 Sum_probs=143.0
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhh----------cCCceeEEeeccCCchhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQ----------HSNLHVIELDVTDFSKQQDV 71 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~----------~~~~~~~~~D~~~~~~~v~~ 71 (248)
|++|||||+|+||++++++|+++| ++|++++|+.+++..+.+.... ..++.++.+|++|.++ +..
T Consensus 81 KvVLVTGATGgIG~aLAr~LLk~G----~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~es-I~~ 155 (576)
T PLN03209 81 DLAFVAGATGKVGSRTVRELLKLG----FRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQ-IGP 155 (576)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC----CeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHH-HHH
Confidence 689999999999999999999999 9999999998887766332211 1357899999999777 433
Q ss_pred HHHHhhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEE
Q psy11190 72 LFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIV 151 (248)
Q Consensus 72 ~~~~i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv 151 (248)
.++ ++|+||||+|.... ...++...+.+|+.+..++++++.+. +.++||
T Consensus 156 -------aLg--giDiVVn~AG~~~~-------~v~d~~~~~~VN~~Gt~nLl~Aa~~a---------------gVgRIV 204 (576)
T PLN03209 156 -------ALG--NASVVICCIGASEK-------EVFDVTGPYRIDYLATKNLVDAATVA---------------KVNHFI 204 (576)
T ss_pred -------Hhc--CCCEEEEccccccc-------cccchhhHHHHHHHHHHHHHHHHHHh---------------CCCEEE
Confidence 344 49999999986531 11246667788888888888876542 457999
Q ss_pred EeecCCCc-ccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC---------------CCCC
Q psy11190 152 NVSSIMGS-IEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS---------------NAPL 215 (248)
Q Consensus 152 ~vss~~~~-~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~---------------~~~~ 215 (248)
++||..+. .+. +. ..|. +|+++..+.+.+..++...||+++.|.||+++|++... ....
T Consensus 205 ~VSSiga~~~g~---p~-~~~~-sk~~~~~~KraaE~~L~~sGIrvTIVRPG~L~tp~d~~~~t~~v~~~~~d~~~gr~i 279 (576)
T PLN03209 205 LVTSLGTNKVGF---PA-AILN-LFWGVLCWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNLTLSEEDTLFGGQV 279 (576)
T ss_pred EEccchhcccCc---cc-cchh-hHHHHHHHHHHHHHHHHHcCCCEEEEECCeecCCccccccccceeeccccccCCCcc
Confidence 99998764 222 11 1243 78888888888998898899999999999998875421 0125
Q ss_pred chhhHHHHHHHHhhhcc
Q psy11190 216 EVGAATAGIIQFIQSLG 232 (248)
Q Consensus 216 ~~~~~~~~~~~~~~~~~ 232 (248)
+++++++.+++++++..
T Consensus 280 sreDVA~vVvfLasd~~ 296 (576)
T PLN03209 280 SNLQVAELMACMAKNRR 296 (576)
T ss_pred CHHHHHHHHHHHHcCch
Confidence 78999999999888643
|
|
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.1e-20 Score=160.98 Aligned_cols=190 Identities=17% Similarity=0.147 Sum_probs=142.2
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||+|+||++++++|+++| .+.+|++.+|+......+..... ..++.++.+|++|.+. +..++ .
T Consensus 5 k~vLVTGatG~IG~~l~~~L~~~g--~~~~V~~~~r~~~~~~~~~~~~~-~~~~~~v~~Dl~d~~~-l~~~~-------~ 73 (324)
T TIGR03589 5 KSILITGGTGSFGKAFISRLLENY--NPKKIIIYSRDELKQWEMQQKFP-APCLRFFIGDVRDKER-LTRAL-------R 73 (324)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHhC--CCcEEEEEcCChhHHHHHHHHhC-CCcEEEEEccCCCHHH-HHHHH-------h
Confidence 689999999999999999999986 22689999988665444332221 2468899999999877 55543 2
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+|||+||.... +..+.+ .+..+++|+.+++++++++.+. +.++||++||....
T Consensus 74 --~iD~Vih~Ag~~~~--~~~~~~---~~~~~~~Nv~g~~~ll~aa~~~---------------~~~~iV~~SS~~~~-- 129 (324)
T TIGR03589 74 --GVDYVVHAAALKQV--PAAEYN---PFECIRTNINGAQNVIDAAIDN---------------GVKRVVALSTDKAA-- 129 (324)
T ss_pred --cCCEEEECcccCCC--chhhcC---HHHHHHHHHHHHHHHHHHHHHc---------------CCCEEEEEeCCCCC--
Confidence 38999999996432 222222 3467899999999999998752 35689999996543
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCC------------CC--C---------CCCchh
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMG------------GS--N---------APLEVG 218 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~------------~~--~---------~~~~~~ 218 (248)
.+...|+++|++.+.+++.++.++...|++++++.||.+..|-. .. . ....++
T Consensus 130 ----~p~~~Y~~sK~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~~~i~~~~~~~~~~~~~~~i~~~~~~r~~i~v~ 205 (324)
T TIGR03589 130 ----NPINLYGATKLASDKLFVAANNISGSKGTRFSVVRYGNVVGSRGSVVPFFKSLKEEGVTELPITDPRMTRFWITLE 205 (324)
T ss_pred ----CCCCHHHHHHHHHHHHHHHHHhhccccCcEEEEEeecceeCCCCCcHHHHHHHHHhCCCCeeeCCCCceEeeEEHH
Confidence 23467999999999999999888888899999999999986521 00 0 024678
Q ss_pred hHHHHHHHHhhh
Q psy11190 219 AATAGIIQFIQS 230 (248)
Q Consensus 219 ~~~~~~~~~~~~ 230 (248)
++++.++..+..
T Consensus 206 D~a~a~~~al~~ 217 (324)
T TIGR03589 206 QGVNFVLKSLER 217 (324)
T ss_pred HHHHHHHHHHhh
Confidence 888888888765
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.84 E-value=1e-19 Score=158.18 Aligned_cols=176 Identities=21% Similarity=0.204 Sum_probs=133.6
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||+|+||.++++.|+++| ++|++++|+...............++.++.+|++|.++ +..++++.
T Consensus 5 k~ilItGatG~IG~~l~~~L~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-~~~~~~~~----- 74 (349)
T TIGR02622 5 KKVLVTGHTGFKGSWLSLWLLELG----AEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAK-LRKAIAEF----- 74 (349)
T ss_pred CEEEEECCCChhHHHHHHHHHHCC----CEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHH-HHHHHhhc-----
Confidence 689999999999999999999999 89999999876544332222223467789999999888 77765543
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+|||+|+.... ..+.+++...+++|+.+++++++++.+. . ..+++|++||...+..
T Consensus 75 --~~d~vih~A~~~~~-----~~~~~~~~~~~~~N~~g~~~ll~a~~~~---~-----------~~~~iv~~SS~~vyg~ 133 (349)
T TIGR02622 75 --KPEIVFHLAAQPLV-----RKSYADPLETFETNVMGTVNLLEAIRAI---G-----------SVKAVVNVTSDKCYRN 133 (349)
T ss_pred --CCCEEEECCccccc-----ccchhCHHHHHHHhHHHHHHHHHHHHhc---C-----------CCCEEEEEechhhhCC
Confidence 38999999985422 2345567788899999999999886431 0 2468999999653321
Q ss_pred ------c---cCCCCCccchhhHHHHHHHHHHHHhhccC----CCeEEEEecCcceecCC
Q psy11190 162 ------D---NTQGGFHPYRCSKAALNAATRSLSIDLKG----DKIIATAMHPGWVKTDM 208 (248)
Q Consensus 162 ------~---~~~~~~~~y~~sK~a~~~~~~~la~e~~~----~~i~v~~v~PG~v~t~~ 208 (248)
. .+..+...|+.+|.+.+.+++.++.++.+ ++++++++.|+.+..|.
T Consensus 134 ~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~ 193 (349)
T TIGR02622 134 DEWVWGYRETDPLGGHDPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGG 193 (349)
T ss_pred CCCCCCCccCCCCCCCCcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCC
Confidence 0 11234568999999999999999988754 48999999999998764
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >PRK13656 trans-2-enoyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=7.4e-19 Score=151.07 Aligned_cols=187 Identities=16% Similarity=0.106 Sum_probs=134.3
Q ss_pred CceEEEecCCCchhHH--HHHHHHhCCCCCCceEEEeecCchhH------------HHHHHHHhh-cCCceeEEeeccCC
Q psy11190 1 MKSILITGCNRGLGLG--MIKVLVGLGNNQPAHIFATCRNKDKA------------VELLALAQQ-HSNLHVIELDVTDF 65 (248)
Q Consensus 1 ~k~~lVtGas~giG~~--ia~~l~~~g~~~~~~V~~~~r~~~~~------------~~~~~~~~~-~~~~~~~~~D~~~~ 65 (248)
.|++||||+++|||.+ +|+.| ++| +.|+++++..++. +.+.+.... +..+..+++|+++.
T Consensus 41 gK~aLVTGaSsGIGlA~~IA~al-~~G----A~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~ 115 (398)
T PRK13656 41 PKKVLVIGASSGYGLASRIAAAF-GAG----ADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSD 115 (398)
T ss_pred CCEEEEECCCchHhHHHHHHHHH-HcC----CeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCH
Confidence 3799999999999999 89999 889 8888887543221 123333332 34567899999999
Q ss_pred chhhhhHHHHhhhhhcCCCccEEEeccccCCccc------------c----C----CC-------------CChhhhhhe
Q psy11190 66 SKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFT------------R----L----GL-------------LKPEQMTDH 112 (248)
Q Consensus 66 ~~~v~~~~~~i~~~~~~~~iD~lv~~ag~~~~~~------------~----~----~~-------------~~~~~~~~~ 112 (248)
++ ++++++.+.+.+| ++|+||||+|...... + + -+ .+.++++.+
T Consensus 116 E~-v~~lie~I~e~~G--~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~~T 192 (398)
T PRK13656 116 EI-KQKVIELIKQDLG--QVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIADT 192 (398)
T ss_pred HH-HHHHHHHHHHhcC--CCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHHHH
Confidence 99 9999999999998 5999999999773211 0 1 11 122222222
Q ss_pred eeecchhh---HHHH--HHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcccccCCCCC--ccchhhHHHHHHHHHHH
Q psy11190 113 FLVNVTAP---LMLT--KTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGF--HPYRCSKAALNAATRSL 185 (248)
Q Consensus 113 ~~~n~~~~---~~l~--~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~~~~~~~~--~~y~~sK~a~~~~~~~l 185 (248)
+. +.|. ..++ ....++|. ++++++.+|........ +.+ ...+.+|++|++-++.|
T Consensus 193 v~--vMggedw~~Wi~al~~a~lla-------------~g~~~va~TY~G~~~t~---p~Y~~g~mG~AKa~LE~~~r~L 254 (398)
T PRK13656 193 VK--VMGGEDWELWIDALDEAGVLA-------------EGAKTVAYSYIGPELTH---PIYWDGTIGKAKKDLDRTALAL 254 (398)
T ss_pred HH--hhccchHHHHHHHHHhccccc-------------CCcEEEEEecCCcceee---cccCCchHHHHHHHHHHHHHHH
Confidence 21 2222 2233 33444443 46889999987776655 444 47799999999999999
Q ss_pred HhhccCCCeEEEEecCcceecCCCCCCC
Q psy11190 186 SIDLKGDKIIATAMHPGWVKTDMGGSNA 213 (248)
Q Consensus 186 a~e~~~~~i~v~~v~PG~v~t~~~~~~~ 213 (248)
+.+|++.|+|+|++.+|++.|.-....+
T Consensus 255 a~~L~~~giran~i~~g~~~T~Ass~Ip 282 (398)
T PRK13656 255 NEKLAAKGGDAYVSVLKAVVTQASSAIP 282 (398)
T ss_pred HHHhhhcCCEEEEEecCcccchhhhcCC
Confidence 9999999999999999999998765544
|
|
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.8e-18 Score=148.76 Aligned_cols=194 Identities=18% Similarity=0.179 Sum_probs=143.1
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhh---cCCceeEEeeccCCchhhhhHHHHhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQ---HSNLHVIELDVTDFSKQQDVLFKDIS 77 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~v~~~~~~i~ 77 (248)
.|++|||||+|+||++++++|+++| +.|++++|+.+.......+... ..++.++.+|+++.++ ++.+++
T Consensus 5 ~k~vlVtG~~G~IG~~l~~~L~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~-~~~~~~--- 76 (325)
T PLN02989 5 GKVVCVTGASGYIASWIVKLLLFRG----YTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGS-FELAID--- 76 (325)
T ss_pred CCEEEEECCchHHHHHHHHHHHHCC----CEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchH-HHHHHc---
Confidence 3789999999999999999999999 8999998887655443322211 2468889999999887 665542
Q ss_pred hhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCC
Q psy11190 78 DVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIM 157 (248)
Q Consensus 78 ~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~ 157 (248)
++|+|||+||.... ..+.+.+...+++|+.+++++++++.+.+ ..++||++||..
T Consensus 77 ------~~d~vih~A~~~~~-----~~~~~~~~~~~~~n~~g~~~ll~a~~~~~--------------~~~~iv~~SS~~ 131 (325)
T PLN02989 77 ------GCETVFHTASPVAI-----TVKTDPQVELINPAVNGTINVLRTCTKVS--------------SVKRVILTSSMA 131 (325)
T ss_pred ------CCCEEEEeCCCCCC-----CCCCChHHHHHHHHHHHHHHHHHHHHHcC--------------CceEEEEecchh
Confidence 38999999996421 23445678889999999999999987752 246899999987
Q ss_pred CcccccC-----------CC--------CCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC-----
Q psy11190 158 GSIEDNT-----------QG--------GFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA----- 213 (248)
Q Consensus 158 ~~~~~~~-----------~~--------~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~----- 213 (248)
+..+... .+ ....|+.+|.+.+.+++.++.+ ++++++.+.|+.+..|...+..
T Consensus 132 ~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~vyGp~~~~~~~~~~~ 208 (325)
T PLN02989 132 AVLAPETKLGPNDVVDETFFTNPSFAEERKQWYVLSKTLAEDAAWRFAKD---NEIDLIVLNPGLVTGPILQPTLNFSVA 208 (325)
T ss_pred heecCCccCCCCCccCcCCCCchhHhcccccchHHHHHHHHHHHHHHHHH---cCCeEEEEcCCceeCCCCCCCCCchHH
Confidence 6543210 00 1246999999999999888765 3799999999999887643210
Q ss_pred ------------------CCchhhHHHHHHHHhhh
Q psy11190 214 ------------------PLEVGAATAGIIQFIQS 230 (248)
Q Consensus 214 ------------------~~~~~~~~~~~~~~~~~ 230 (248)
...++++++.++..+..
T Consensus 209 ~i~~~~~~~~~~~~~~r~~i~v~Dva~a~~~~l~~ 243 (325)
T PLN02989 209 VIVELMKGKNPFNTTHHRFVDVRDVALAHVKALET 243 (325)
T ss_pred HHHHHHcCCCCCCCcCcCeeEHHHHHHHHHHHhcC
Confidence 01257788888877765
|
|
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=2e-17 Score=144.01 Aligned_cols=203 Identities=13% Similarity=0.073 Sum_probs=136.3
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEE-EeecCchh--HHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIF-ATCRNKDK--AVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDIS 77 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~-~~~r~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~ 77 (248)
||++|||||+|+||++++++|+++| +.++ +.++.... ...+... ....++.++.+|++|.++ ++++++..
T Consensus 1 ~~~vlVtGatGfIG~~l~~~L~~~g----~~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~-~~~~~~~~- 73 (355)
T PRK10217 1 MRKILITGGAGFIGSALVRYIINET----SDAVVVVDKLTYAGNLMSLAPV-AQSERFAFEKVDICDRAE-LARVFTEH- 73 (355)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHHcC----CCEEEEEecCccccchhhhhhc-ccCCceEEEECCCcChHH-HHHHHhhc-
Confidence 8899999999999999999999999 6544 45554321 1111111 123367788999999888 77665541
Q ss_pred hhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCC
Q psy11190 78 DVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIM 157 (248)
Q Consensus 78 ~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~ 157 (248)
++|+|||+||.... +.+.+.++..+++|+.+++++++.+.+.+..-... ..+..+++++||.+
T Consensus 74 ------~~D~Vih~A~~~~~-----~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~------~~~~~~~i~~SS~~ 136 (355)
T PRK10217 74 ------QPDCVMHLAAESHV-----DRSIDGPAAFIETNIVGTYTLLEAARAYWNALTED------KKSAFRFHHISTDE 136 (355)
T ss_pred ------CCCEEEECCcccCc-----chhhhChHHHHHHhhHHHHHHHHHHHHhhhccccc------ccCceEEEEecchh
Confidence 39999999986532 23445678899999999999999998754210000 00235899999865
Q ss_pred Ccccc----------cCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC----------------
Q psy11190 158 GSIED----------NTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS---------------- 211 (248)
Q Consensus 158 ~~~~~----------~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~---------------- 211 (248)
.+... .+..+...|+.+|.+.+.+++.++.++ ++++..+.|+.+..|-..+
T Consensus 137 vyg~~~~~~~~~~E~~~~~p~s~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~ 213 (355)
T PRK10217 137 VYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTY---GLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKP 213 (355)
T ss_pred hcCCCCCCCCCcCCCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCeEEEeeeeeeCCCCCcccHHHHHHHHHhcCCC
Confidence 32110 112346689999999999999988764 5666666666554443211
Q ss_pred ----------CCCCchhhHHHHHHHHhhh
Q psy11190 212 ----------NAPLEVGAATAGIIQFIQS 230 (248)
Q Consensus 212 ----------~~~~~~~~~~~~~~~~~~~ 230 (248)
......++++++++..+..
T Consensus 214 ~~~~g~g~~~~~~i~v~D~a~a~~~~~~~ 242 (355)
T PRK10217 214 LPVYGNGQQIRDWLYVEDHARALYCVATT 242 (355)
T ss_pred ceEeCCCCeeeCcCcHHHHHHHHHHHHhc
Confidence 0135678888888877765
|
|
| >PRK06720 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.7e-17 Score=129.50 Aligned_cols=145 Identities=13% Similarity=0.154 Sum_probs=112.5
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH-HHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL-LALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|+++||||++|||+++++.|+++| ++|++++|+.+.+++. .++...+....++++|+++.++ ++++++++.+.+
T Consensus 17 k~~lVTGa~~GIG~aia~~l~~~G----~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~-v~~~v~~~~~~~ 91 (169)
T PRK06720 17 KVAIVTGGGIGIGRNTALLLAKQG----AKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGD-WQRVISITLNAF 91 (169)
T ss_pred CEEEEecCCChHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHH-HHHHHHHHHHHc
Confidence 689999999999999999999999 8999999998776665 3333334567789999999999 999999988887
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+ ++|++|||||......++.+.+.++ ++ .+|+.+.+..++.+.+.+.++.++= .-.+.|++..+|+.+..+
T Consensus 92 G--~iDilVnnAG~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 162 (169)
T PRK06720 92 S--RIDMLFQNAGLYKIDSIFSRQQEND-SN--VLCINDVWIEIKQLTSSFMKQQEEV----VLSDLPIFGIIGTKGQSF 162 (169)
T ss_pred C--CCCEEEECCCcCCCCCcccccchhH-hh--ceeccHHHHHHHHHHHHHHhcCCEE----EeecCceeeEeccccccc
Confidence 7 5999999999876534555545444 44 5677788889999999988753321 112568899999877543
|
|
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.76 E-value=4e-17 Score=138.94 Aligned_cols=202 Identities=15% Similarity=0.169 Sum_probs=140.6
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhH--HHH-HHHHhhcCCceeEEeeccCCchhhhhHHHHhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKA--VEL-LALAQQHSNLHVIELDVTDFSKQQDVLFKDIS 77 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~--~~~-~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~ 77 (248)
.|+++||||+|+||++++++|+++| ++|+++.|+.++. .+. ..+.....++.++++|++|.++ +..+
T Consensus 6 ~k~vlVTGatG~IG~~lv~~Ll~~G----~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~-~~~~----- 75 (297)
T PLN02583 6 SKSVCVMDASGYVGFWLVKRLLSRG----YTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHS-ILDA----- 75 (297)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCC----CEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHH-HHHH-----
Confidence 3689999999999999999999999 9999999864332 222 2221123468889999999877 4332
Q ss_pred hhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCC
Q psy11190 78 DVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIM 157 (248)
Q Consensus 78 ~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~ 157 (248)
+. ++|.++|.++.... . .++++..+++|+.+++++++++.+.+ ..++||++||..
T Consensus 76 --l~--~~d~v~~~~~~~~~------~-~~~~~~~~~~nv~gt~~ll~aa~~~~--------------~v~riV~~SS~~ 130 (297)
T PLN02583 76 --LK--GCSGLFCCFDPPSD------Y-PSYDEKMVDVEVRAAHNVLEACAQTD--------------TIEKVVFTSSLT 130 (297)
T ss_pred --Hc--CCCEEEEeCccCCc------c-cccHHHHHHHHHHHHHHHHHHHHhcC--------------CccEEEEecchH
Confidence 22 38899987653221 1 12467889999999999999987753 236899999987
Q ss_pred Ccccc-cC------CC--CC----------ccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC-----C
Q psy11190 158 GSIED-NT------QG--GF----------HPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN-----A 213 (248)
Q Consensus 158 ~~~~~-~~------~~--~~----------~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~-----~ 213 (248)
+.... .. .. .+ ..|+.+|...+.+++.++++ +|+++++|.|+++..|..... .
T Consensus 131 a~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~~---~gi~~v~lrp~~v~Gp~~~~~~~~~~~ 207 (297)
T PLN02583 131 AVIWRDDNISTQKDVDERSWSDQNFCRKFKLWHALAKTLSEKTAWALAMD---RGVNMVSINAGLLMGPSLTQHNPYLKG 207 (297)
T ss_pred heecccccCCCCCCCCcccCCCHHHHhhcccHHHHHHHHHHHHHHHHHHH---hCCcEEEEcCCcccCCCCCCchhhhcC
Confidence 64311 00 00 01 15999999999988877654 489999999999988864321 0
Q ss_pred -----------CCchhhHHHHHHHHhhhcccccccceeee
Q psy11190 214 -----------PLEVGAATAGIIQFIQSLGEAHNGGFFEY 242 (248)
Q Consensus 214 -----------~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 242 (248)
...++++++.++..+..+ ...+.|+-.
T Consensus 208 ~~~~~~~~~~~~v~V~Dva~a~~~al~~~--~~~~r~~~~ 245 (297)
T PLN02583 208 AAQMYENGVLVTVDVNFLVDAHIRAFEDV--SSYGRYLCF 245 (297)
T ss_pred CcccCcccCcceEEHHHHHHHHHHHhcCc--ccCCcEEEe
Confidence 235689999999888753 233455543
|
|
| >KOG1502|consensus | Back alignment and domain information |
|---|
Probab=99.76 E-value=5.4e-17 Score=136.47 Aligned_cols=202 Identities=16% Similarity=0.159 Sum_probs=146.2
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHH---HHHHHhhcCCceeEEeeccCCchhhhhHHHHhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVE---LLALAQQHSNLHVIELDVTDFSKQQDVLFKDIS 77 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~---~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~ 77 (248)
+++++||||||.||.+++++|+++| +.|..+.|++++.+. +.++.....++..+..|++|.++ ...+
T Consensus 6 ~~~VcVTGAsGfIgswivk~LL~rG----Y~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~s-f~~a----- 75 (327)
T KOG1502|consen 6 GKKVCVTGASGFIGSWIVKLLLSRG----YTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGS-FDKA----- 75 (327)
T ss_pred CcEEEEeCCchHHHHHHHHHHHhCC----CEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccch-HHHH-----
Confidence 3689999999999999999999999 999999999988554 34444445579999999999988 3333
Q ss_pred hhhcCCCccEEEeccccCCccccCCCCChhhhh-heeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecC
Q psy11190 78 DVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMT-DHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSI 156 (248)
Q Consensus 78 ~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~ 156 (248)
+. ++|+|||.|..... . .++.+ +.++.++.|+.++++++.+.= .--|||++||.
T Consensus 76 --i~--gcdgVfH~Asp~~~-~------~~~~e~~li~pav~Gt~nVL~ac~~~~--------------sVkrvV~TSS~ 130 (327)
T KOG1502|consen 76 --ID--GCDGVFHTASPVDF-D------LEDPEKELIDPAVKGTKNVLEACKKTK--------------SVKRVVYTSST 130 (327)
T ss_pred --Hh--CCCEEEEeCccCCC-C------CCCcHHhhhhHHHHHHHHHHHHHhccC--------------CcceEEEeccH
Confidence 22 49999999976543 1 11133 688889999999999987752 13579999999
Q ss_pred CCcccc-cCCCC--------C----------ccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC----
Q psy11190 157 MGSIED-NTQGG--------F----------HPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA---- 213 (248)
Q Consensus 157 ~~~~~~-~~~~~--------~----------~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~---- 213 (248)
++.... +.... | ..|+.+|...+.-+..++.+ +++...+|+|+.|-.|...+..
T Consensus 131 aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~~~~Y~~sK~lAEkaAw~fa~e---~~~~lv~inP~lV~GP~l~~~l~~s~ 207 (327)
T KOG1502|consen 131 AAVRYNGPNIGENSVVDEESWSDLDFCRCKKLWYALSKTLAEKAAWEFAKE---NGLDLVTINPGLVFGPGLQPSLNSSL 207 (327)
T ss_pred HHhccCCcCCCCCcccccccCCcHHHHHhhHHHHHHHHHHHHHHHHHHHHh---CCccEEEecCCceECCCcccccchhH
Confidence 988754 11111 1 13667776666555555554 4799999999999999876622
Q ss_pred --------------------CCchhhHHHHHHHHhhhcccccccceeee
Q psy11190 214 --------------------PLEVGAATAGIIQFIQSLGEAHNGGFFEY 242 (248)
Q Consensus 214 --------------------~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 242 (248)
.....+++.+.+..++.+. ..|+|+-.
T Consensus 208 ~~~l~~i~G~~~~~~n~~~~~VdVrDVA~AHv~a~E~~~--a~GRyic~ 254 (327)
T KOG1502|consen 208 NALLKLIKGLAETYPNFWLAFVDVRDVALAHVLALEKPS--AKGRYICV 254 (327)
T ss_pred HHHHHHHhcccccCCCCceeeEeHHHHHHHHHHHHcCcc--cCceEEEe
Confidence 1456777777777777633 33666543
|
|
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.75 E-value=8.4e-17 Score=138.31 Aligned_cols=193 Identities=16% Similarity=0.158 Sum_probs=138.6
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHh---hcCCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQ---QHSNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
|+++||||+|+||++++++|+++| ++|+++.|+.++.+.+..+.. ...++.++.+|+++.+. +..+++
T Consensus 6 ~~vlVTGatG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-~~~~~~---- 76 (322)
T PLN02986 6 KLVCVTGASGYIASWIVKLLLLRG----YTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESS-FEQAIE---- 76 (322)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC----CEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcch-HHHHHh----
Confidence 789999999999999999999999 899999998776544433322 12468889999999887 555433
Q ss_pred hhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 79 VVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
++|+|||+|+.... . ..+...+.+++|+.++.++++.+... . +-.+||++||..+
T Consensus 77 -----~~d~vih~A~~~~~-~-----~~~~~~~~~~~nv~gt~~ll~~~~~~---~-----------~v~rvV~~SS~~~ 131 (322)
T PLN02986 77 -----GCDAVFHTASPVFF-T-----VKDPQTELIDPALKGTINVLNTCKET---P-----------SVKRVILTSSTAA 131 (322)
T ss_pred -----CCCEEEEeCCCcCC-C-----CCCchhhhhHHHHHHHHHHHHHHHhc---C-----------CccEEEEecchhh
Confidence 38999999986422 1 11223467888999999998876432 0 2358999999875
Q ss_pred cc-cccCC------------------CCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC-------
Q psy11190 159 SI-EDNTQ------------------GGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN------- 212 (248)
Q Consensus 159 ~~-~~~~~------------------~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~------- 212 (248)
.. +..+. .+...|+.+|.+.+.+++.+.++ ++++++++.|+.+..|...+.
T Consensus 132 ~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~---~~~~~~~lrp~~v~Gp~~~~~~~~~~~~ 208 (322)
T PLN02986 132 VLFRQPPIEANDVVDETFFSDPSLCRETKNWYPLSKILAENAAWEFAKD---NGIDMVVLNPGFICGPLLQPTLNFSVEL 208 (322)
T ss_pred eecCCccCCCCCCcCcccCCChHHhhccccchHHHHHHHHHHHHHHHHH---hCCeEEEEcccceeCCCCCCCCCccHHH
Confidence 32 11000 01356999999999988887765 379999999999998864321
Q ss_pred ----------------CCCchhhHHHHHHHHhhhc
Q psy11190 213 ----------------APLEVGAATAGIIQFIQSL 231 (248)
Q Consensus 213 ----------------~~~~~~~~~~~~~~~~~~~ 231 (248)
....++++++.++..+..+
T Consensus 209 ~~~~~~g~~~~~~~~~~~v~v~Dva~a~~~al~~~ 243 (322)
T PLN02986 209 IVDFINGKNLFNNRFYRFVDVRDVALAHIKALETP 243 (322)
T ss_pred HHHHHcCCCCCCCcCcceeEHHHHHHHHHHHhcCc
Confidence 0234677888887777653
|
|
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.9e-16 Score=131.55 Aligned_cols=193 Identities=19% Similarity=0.189 Sum_probs=128.6
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
||+++||||+|+||++++++|+++| ++|+++.|+.++..... ....++.++++|+++.. ..+.+.+.
T Consensus 17 ~~~ilItGasG~iG~~l~~~L~~~g----~~V~~~~R~~~~~~~~~---~~~~~~~~~~~Dl~d~~---~~l~~~~~--- 83 (251)
T PLN00141 17 TKTVFVAGATGRTGKRIVEQLLAKG----FAVKAGVRDVDKAKTSL---PQDPSLQIVRADVTEGS---DKLVEAIG--- 83 (251)
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCC----CEEEEEecCHHHHHHhc---ccCCceEEEEeeCCCCH---HHHHHHhh---
Confidence 5789999999999999999999999 89999999977644321 12346889999999742 12222221
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
. ++|+||+++|.... .. ....+++|+.+..++++.+. +. +.++||++||.....
T Consensus 84 ~--~~d~vi~~~g~~~~---~~------~~~~~~~n~~~~~~ll~a~~----~~-----------~~~~iV~iSS~~v~g 137 (251)
T PLN00141 84 D--DSDAVICATGFRRS---FD------PFAPWKVDNFGTVNLVEACR----KA-----------GVTRFILVSSILVNG 137 (251)
T ss_pred c--CCCEEEECCCCCcC---CC------CCCceeeehHHHHHHHHHHH----Hc-----------CCCEEEEEccccccC
Confidence 1 49999999986421 11 11235788888888888763 22 457899999986432
Q ss_pred cccCCCCCccchhhHHHHHHHH-HHHHhh-ccCCCeEEEEecCcceecCCCCC-----------CCCCchhhHHHHHHHH
Q psy11190 161 EDNTQGGFHPYRCSKAALNAAT-RSLSID-LKGDKIIATAMHPGWVKTDMGGS-----------NAPLEVGAATAGIIQF 227 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~-~~la~e-~~~~~i~v~~v~PG~v~t~~~~~-----------~~~~~~~~~~~~~~~~ 227 (248)
...+.+....|...|.....+. +..+.+ +...|++++.|.||++.+++... ....+++++++.+...
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~~gi~~~iirpg~~~~~~~~~~~~~~~~~~~~~~~i~~~dvA~~~~~~ 217 (251)
T PLN00141 138 AAMGQILNPAYIFLNLFGLTLVAKLQAEKYIRKSGINYTIVRPGGLTNDPPTGNIVMEPEDTLYEGSISRDQVAEVAVEA 217 (251)
T ss_pred CCcccccCcchhHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECCCccCCCCCceEEECCCCccccCcccHHHHHHHHHHH
Confidence 2111122345666665433332 222222 35678999999999997764321 1246899999999999
Q ss_pred hhhcc
Q psy11190 228 IQSLG 232 (248)
Q Consensus 228 ~~~~~ 232 (248)
+..+.
T Consensus 218 ~~~~~ 222 (251)
T PLN00141 218 LLCPE 222 (251)
T ss_pred hcChh
Confidence 87644
|
|
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=99.74 E-value=8.3e-17 Score=140.01 Aligned_cols=192 Identities=15% Similarity=0.091 Sum_probs=138.7
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhh---cCCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQ---HSNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
|++|||||+|.||++++++|+++| ++|++++|+.+....+..+... ..++.++.+|+++.+. +..+++
T Consensus 6 k~iLVTGatGfIGs~l~~~L~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~-~~~~~~---- 76 (351)
T PLN02650 6 ETVCVTGASGFIGSWLVMRLLERG----YTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGS-FDDAIR---- 76 (351)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHCC----CEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhh-HHHHHh----
Confidence 689999999999999999999999 8999999987665554333221 1357889999999877 554432
Q ss_pred hhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 79 VVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
.+|+|||+|+.... . ..+..+..+++|+.+++++++.+.+.. ...+||++||...
T Consensus 77 -----~~d~ViH~A~~~~~----~--~~~~~~~~~~~Nv~gt~~ll~aa~~~~--------------~~~r~v~~SS~~~ 131 (351)
T PLN02650 77 -----GCTGVFHVATPMDF----E--SKDPENEVIKPTVNGMLSIMKACAKAK--------------TVRRIVFTSSAGT 131 (351)
T ss_pred -----CCCEEEEeCCCCCC----C--CCCchhhhhhHHHHHHHHHHHHHHhcC--------------CceEEEEecchhh
Confidence 38999999985421 1 112335678899999999999887641 1357999999754
Q ss_pred ccccc---C----C------------CCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC-------
Q psy11190 159 SIEDN---T----Q------------GGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN------- 212 (248)
Q Consensus 159 ~~~~~---~----~------------~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~------- 212 (248)
..+.. + . .+...|+.+|.+.+.+++.++.+ +|++++.+.|+.+..|.....
T Consensus 132 ~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~ilRp~~v~Gp~~~~~~~~~~~~ 208 (351)
T PLN02650 132 VNVEEHQKPVYDEDCWSDLDFCRRKKMTGWMYFVSKTLAEKAAWKYAAE---NGLDFISIIPTLVVGPFISTSMPPSLIT 208 (351)
T ss_pred cccCCCCCCccCcccCCchhhhhccccccchHHHHHHHHHHHHHHHHHH---cCCeEEEECCCceECCCCCCCCCccHHH
Confidence 32210 0 0 01236999999999999888765 589999999999988853210
Q ss_pred ------------------CCCchhhHHHHHHHHhhh
Q psy11190 213 ------------------APLEVGAATAGIIQFIQS 230 (248)
Q Consensus 213 ------------------~~~~~~~~~~~~~~~~~~ 230 (248)
....++++++.++.++..
T Consensus 209 ~~~~~~~~~~~~~~~~~r~~v~V~Dva~a~~~~l~~ 244 (351)
T PLN02650 209 ALSLITGNEAHYSIIKQGQFVHLDDLCNAHIFLFEH 244 (351)
T ss_pred HHHHhcCCccccCcCCCcceeeHHHHHHHHHHHhcC
Confidence 124577888888887765
|
|
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.3e-16 Score=139.01 Aligned_cols=176 Identities=18% Similarity=0.143 Sum_probs=124.3
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
+++|||||+|.||++++++|+++| ++|++++|+.+....+........++.++.+|+++.+. +..++ .
T Consensus 11 ~~vLVtG~~GfIG~~l~~~L~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-~~~~~-------~ 78 (353)
T PLN02896 11 GTYCVTGATGYIGSWLVKLLLQRG----YTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGS-FDEAV-------K 78 (353)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC----CEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHH-HHHHH-------c
Confidence 479999999999999999999999 89999999876655443322224568889999999877 55443 1
Q ss_pred CCCccEEEeccccCCccccCCCCChhhh--hheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQM--TDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
++|+|||+|+...........+++.+ ...++.|+.++.++++.+.+.. ..++||++||.+.+
T Consensus 79 --~~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~--------------~~~~~v~~SS~~vy 142 (353)
T PLN02896 79 --GCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSK--------------TVKRVVFTSSISTL 142 (353)
T ss_pred --CCCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcC--------------CccEEEEEechhhc
Confidence 38999999997643111122233332 3456667788888888876541 23579999997654
Q ss_pred cccc----------C------------CCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCC
Q psy11190 160 IEDN----------T------------QGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208 (248)
Q Consensus 160 ~~~~----------~------------~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~ 208 (248)
.... . .++...|+.+|.+.+.+++.++.+ +++++.++.|+.+..|.
T Consensus 143 g~~~~~~~~~~~~~E~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~vyGp~ 210 (353)
T PLN02896 143 TAKDSNGRWRAVVDETCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKE---NGIDLVSVITTTVAGPF 210 (353)
T ss_pred cccccCCCCCCccCcccCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCC
Confidence 3110 0 012237999999999999888765 37999999998777764
|
|
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=9.9e-17 Score=138.81 Aligned_cols=171 Identities=16% Similarity=0.159 Sum_probs=124.1
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHH--HhhcCCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLAL--AQQHSNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
||++|||||+|.||++++++|+++| ++|+++.|+.+........ ....+++.++.+|++|.++ +..++
T Consensus 9 ~~~vlItG~~GfIG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~-~~~~~----- 78 (338)
T PLN00198 9 KKTACVIGGTGFLASLLIKLLLQKG----YAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEES-FEAPI----- 78 (338)
T ss_pred CCeEEEECCchHHHHHHHHHHHHCC----CEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHH-HHHHH-----
Confidence 4789999999999999999999999 8999888886554333211 1112367889999999877 55432
Q ss_pred hhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 79 VVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
. ++|+|||+|+... .. ..+.....+++|+.++.++++++.+.. +.+++|++||.+.
T Consensus 79 --~--~~d~vih~A~~~~----~~--~~~~~~~~~~~nv~g~~~ll~a~~~~~--------------~~~~~v~~SS~~~ 134 (338)
T PLN00198 79 --A--GCDLVFHVATPVN----FA--SEDPENDMIKPAIQGVHNVLKACAKAK--------------SVKRVILTSSAAA 134 (338)
T ss_pred --h--cCCEEEEeCCCCc----cC--CCChHHHHHHHHHHHHHHHHHHHHhcC--------------CccEEEEeeccee
Confidence 2 3899999998532 11 122344567889999999999876531 2468999999765
Q ss_pred ccccc---------------------CCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCC
Q psy11190 159 SIEDN---------------------TQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208 (248)
Q Consensus 159 ~~~~~---------------------~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~ 208 (248)
..... ..++...|+.||.+.+.+++.++.+ +|++++.+.|+.+..|-
T Consensus 135 ~g~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~~R~~~vyGp~ 202 (338)
T PLN00198 135 VSINKLSGTGLVMNEKNWTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEE---NNIDLITVIPTLMAGPS 202 (338)
T ss_pred eeccCCCCCCceeccccCCchhhhhhcCCccchhHHHHHHHHHHHHHHHHh---cCceEEEEeCCceECCC
Confidence 43210 0123456999999999999888765 47999999999988774
|
|
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.2e-16 Score=142.88 Aligned_cols=177 Identities=14% Similarity=0.066 Sum_probs=126.0
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchh-----------------HHHHHHHHh-hcCCceeEEeec
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDK-----------------AVELLALAQ-QHSNLHVIELDV 62 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~-----------------~~~~~~~~~-~~~~~~~~~~D~ 62 (248)
||++|||||+|+||++++++|+++| +.|+++++.... .+.+..... ...++.++.+|+
T Consensus 47 ~k~VLVTGatGfIGs~Lv~~L~~~G----~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 122 (442)
T PLN02572 47 KKKVMVIGGDGYCGWATALHLSKRG----YEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDI 122 (442)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCC----CeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCC
Confidence 5789999999999999999999999 899998743210 011111111 123688999999
Q ss_pred cCCchhhhhHHHHhhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCC
Q psy11190 63 TDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAP 142 (248)
Q Consensus 63 ~~~~~~v~~~~~~i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~ 142 (248)
+|.+. +..+++.. ++|+|||+|+... ......++++++..+++|+.+++++++.+...-
T Consensus 123 ~d~~~-v~~~l~~~-------~~D~ViHlAa~~~--~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~g----------- 181 (442)
T PLN02572 123 CDFEF-LSEAFKSF-------EPDAVVHFGEQRS--APYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFA----------- 181 (442)
T ss_pred CCHHH-HHHHHHhC-------CCCEEEECCCccc--ChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhC-----------
Confidence 99888 77666553 3999999997642 233344556677788899999999998875531
Q ss_pred CCCCCceEEEeecCCCccccc---------------------CCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecC
Q psy11190 143 LGSSRAAIVNVSSIMGSIEDN---------------------TQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHP 201 (248)
Q Consensus 143 ~~~~~~~iv~vss~~~~~~~~---------------------~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~P 201 (248)
...++|++||.+.+.... +..+...|+.+|.+.+.+++..+.. +|+++..+.|
T Consensus 182 ---v~~~~V~~SS~~vYG~~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~---~gl~~v~lR~ 255 (442)
T PLN02572 182 ---PDCHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQ 255 (442)
T ss_pred ---CCccEEEEecceecCCCCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHh---cCCCEEEEec
Confidence 124799999876432110 1123457999999999998887755 4789999999
Q ss_pred cceecCC
Q psy11190 202 GWVKTDM 208 (248)
Q Consensus 202 G~v~t~~ 208 (248)
+.+..|.
T Consensus 256 ~~vyGp~ 262 (442)
T PLN02572 256 GVVYGVR 262 (442)
T ss_pred ccccCCC
Confidence 8887764
|
|
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.3e-16 Score=138.40 Aligned_cols=188 Identities=15% Similarity=0.149 Sum_probs=136.2
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH--HHHHhhcCCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL--LALAQQHSNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~--~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
||+++||||+|.||++++++|+++| ++|++++|+.+..... ..+.....++.++.+|++|.++ +..+++
T Consensus 10 ~~~vlVTGatGfIG~~l~~~L~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~-~~~~~~---- 80 (342)
T PLN02214 10 GKTVCVTGAGGYIASWIVKILLERG----YTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEA-LKAAID---- 80 (342)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCc----CEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHH-HHHHHh----
Confidence 5789999999999999999999999 8999999987643221 2222112357889999999877 554432
Q ss_pred hhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 79 VVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
++|+|||+|+... ++.+..+++|+.++.++++++.+. +-.+||++||..+
T Consensus 81 -----~~d~Vih~A~~~~----------~~~~~~~~~nv~gt~~ll~aa~~~---------------~v~r~V~~SS~~a 130 (342)
T PLN02214 81 -----GCDGVFHTASPVT----------DDPEQMVEPAVNGAKFVINAAAEA---------------KVKRVVITSSIGA 130 (342)
T ss_pred -----cCCEEEEecCCCC----------CCHHHHHHHHHHHHHHHHHHHHhc---------------CCCEEEEecccee
Confidence 3899999998531 235667888999999999887542 3458999999765
Q ss_pred cccccC------------------CCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC--------
Q psy11190 159 SIEDNT------------------QGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN-------- 212 (248)
Q Consensus 159 ~~~~~~------------------~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~-------- 212 (248)
.++... ..+...|+.+|.+.+.+++.++.+ +|+++..+.|+.+..|.....
T Consensus 131 vyg~~~~~~~~~~~E~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~---~g~~~v~lRp~~vyGp~~~~~~~~~~~~~ 207 (342)
T PLN02214 131 VYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKE---KGVDLVVLNPVLVLGPPLQPTINASLYHV 207 (342)
T ss_pred eeccCCCCCCcccCcccCCChhhccccccHHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCceECCCCCCCCCchHHHH
Confidence 543110 002346999999999999888765 379999999999987753211
Q ss_pred ----------------CCCchhhHHHHHHHHhhh
Q psy11190 213 ----------------APLEVGAATAGIIQFIQS 230 (248)
Q Consensus 213 ----------------~~~~~~~~~~~~~~~~~~ 230 (248)
.....+++++.++..+..
T Consensus 208 ~~~~~g~~~~~~~~~~~~i~V~Dva~a~~~al~~ 241 (342)
T PLN02214 208 LKYLTGSAKTYANLTQAYVDVRDVALAHVLVYEA 241 (342)
T ss_pred HHHHcCCcccCCCCCcCeeEHHHHHHHHHHHHhC
Confidence 012477888888877765
|
|
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.72 E-value=4.6e-17 Score=141.02 Aligned_cols=203 Identities=16% Similarity=0.050 Sum_probs=136.5
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhH--HHHHHHH----hhcCCceeEEeeccCCchhhhhHHH
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKA--VELLALA----QQHSNLHVIELDVTDFSKQQDVLFK 74 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~--~~~~~~~----~~~~~~~~~~~D~~~~~~~v~~~~~ 74 (248)
+|++|||||+|+||++++++|+++| ++|++++|+.+.. ..+..+. ....++.++.+|++|.++ +..+++
T Consensus 6 ~~~vlVTGatGfiG~~l~~~L~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~-~~~~~~ 80 (340)
T PLN02653 6 RKVALITGITGQDGSYLTEFLLSKG----YEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASS-LRRWLD 80 (340)
T ss_pred CCEEEEECCCCccHHHHHHHHHHCC----CEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHH-HHHHHH
Confidence 3689999999999999999999999 8999998875431 1122111 112357899999999888 776665
Q ss_pred HhhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEee
Q psy11190 75 DISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVS 154 (248)
Q Consensus 75 ~i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vs 154 (248)
.+ .+|+|||+|+.... ....+..+..+++|+.++.++++.+.+...++. .-.++|++|
T Consensus 81 ~~-------~~d~Vih~A~~~~~-----~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~----------~~~~~v~~S 138 (340)
T PLN02653 81 DI-------KPDEVYNLAAQSHV-----AVSFEMPDYTADVVATGALRLLEAVRLHGQETG----------RQIKYYQAG 138 (340)
T ss_pred Hc-------CCCEEEECCcccch-----hhhhhChhHHHHHHHHHHHHHHHHHHHhccccc----------cceeEEEec
Confidence 53 28999999997543 112334566778899999999999888754310 012688887
Q ss_pred cCCCcccc-------cCCCCCccchhhHHHHHHHHHHHHhhccC---CCeEEEEecCcceecCC-------------CCC
Q psy11190 155 SIMGSIED-------NTQGGFHPYRCSKAALNAATRSLSIDLKG---DKIIATAMHPGWVKTDM-------------GGS 211 (248)
Q Consensus 155 s~~~~~~~-------~~~~~~~~y~~sK~a~~~~~~~la~e~~~---~~i~v~~v~PG~v~t~~-------------~~~ 211 (248)
|...+-.. .+..+...|+.+|.+.+.+++.++.++.- .++.++.+.|+...+.+ ...
T Consensus 139 s~~vyg~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~ 218 (340)
T PLN02653 139 SSEMYGSTPPPQSETTPFHPRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQ 218 (340)
T ss_pred cHHHhCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCC
Confidence 75322111 01124567999999999999999877642 23455666675432211 000
Q ss_pred -----------CCCCchhhHHHHHHHHhhh
Q psy11190 212 -----------NAPLEVGAATAGIIQFIQS 230 (248)
Q Consensus 212 -----------~~~~~~~~~~~~~~~~~~~ 230 (248)
......+++++.++..+..
T Consensus 219 ~~~~~g~g~~~rd~i~v~D~a~a~~~~~~~ 248 (340)
T PLN02653 219 KKLFLGNLDASRDWGFAGDYVEAMWLMLQQ 248 (340)
T ss_pred CceEeCCCcceecceeHHHHHHHHHHHHhc
Confidence 0124688999999888865
|
|
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.4e-16 Score=138.17 Aligned_cols=200 Identities=15% Similarity=0.032 Sum_probs=131.3
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhH--HHHHHHHh-----hcCCceeEEeeccCCchhhhhHHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKA--VELLALAQ-----QHSNLHVIELDVTDFSKQQDVLFK 74 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~--~~~~~~~~-----~~~~~~~~~~D~~~~~~~v~~~~~ 74 (248)
|++|||||+|+||++++++|+++| ++|++++|+.+.. ..+..+.. ...++.++++|++|.++ +..+++
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~-l~~~~~ 75 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKG----YEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSN-LRRIID 75 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCC----CEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHH-HHHHHH
Confidence 689999999999999999999999 8999999986421 11222111 02357899999999887 666655
Q ss_pred HhhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEee
Q psy11190 75 DISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVS 154 (248)
Q Consensus 75 ~i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vs 154 (248)
.+ ++|+|||+|+.... . ...+.-...+++|+.++.++++++.+.-.+ ...++|++|
T Consensus 76 ~~-------~~d~ViH~Aa~~~~-~----~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~------------~~~~~v~~S 131 (343)
T TIGR01472 76 EI-------KPTEIYNLAAQSHV-K----VSFEIPEYTADVDGIGTLRLLEAVRTLGLI------------KSVKFYQAS 131 (343)
T ss_pred hC-------CCCEEEECCccccc-c----hhhhChHHHHHHHHHHHHHHHHHHHHhCCC------------cCeeEEEec
Confidence 43 28999999997543 1 122223456678999999999888764111 124789998
Q ss_pred cCCCcccc--------cCCCCCccchhhHHHHHHHHHHHHhhccC---CCeEEEEecCcceecCC-------------CC
Q psy11190 155 SIMGSIED--------NTQGGFHPYRCSKAALNAATRSLSIDLKG---DKIIATAMHPGWVKTDM-------------GG 210 (248)
Q Consensus 155 s~~~~~~~--------~~~~~~~~y~~sK~a~~~~~~~la~e~~~---~~i~v~~v~PG~v~t~~-------------~~ 210 (248)
|...+... .+..+...|+.||.+.+.+++.++.++.- .++.++...|+.-+..+ ..
T Consensus 132 S~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~ 211 (343)
T TIGR01472 132 TSELYGKVQEIPQNETTPFYPRSPYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGL 211 (343)
T ss_pred cHHhhCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCC
Confidence 86433211 11134568999999999999998876531 12333455554211100 00
Q ss_pred -----------CCCCCchhhHHHHHHHHhhh
Q psy11190 211 -----------SNAPLEVGAATAGIIQFIQS 230 (248)
Q Consensus 211 -----------~~~~~~~~~~~~~~~~~~~~ 230 (248)
.......++++++++..+..
T Consensus 212 ~~~~~~g~g~~~rd~i~V~D~a~a~~~~~~~ 242 (343)
T TIGR01472 212 QEKLYLGNLDAKRDWGHAKDYVEAMWLMLQQ 242 (343)
T ss_pred CCceeeCCCccccCceeHHHHHHHHHHHHhc
Confidence 01124688888888887765
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.69 E-value=6.2e-16 Score=132.72 Aligned_cols=193 Identities=16% Similarity=0.163 Sum_probs=136.0
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHh---hcCCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQ---QHSNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
|++|||||+|.||++++++|+++| ++|++++|+.+.......+.. ..+++.++++|+++.+. +..+++
T Consensus 5 ~~ilVtGatGfIG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-~~~~~~---- 75 (322)
T PLN02662 5 KVVCVTGASGYIASWLVKLLLQRG----YTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGS-FDSVVD---- 75 (322)
T ss_pred CEEEEECChHHHHHHHHHHHHHCC----CEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcch-HHHHHc----
Confidence 679999999999999999999999 899999998765433322221 12478899999999887 555432
Q ss_pred hhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 79 VVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
++|+|||+|+.... .. .+.....+++|+.++.++++.+.+.. +-.++|++||..+
T Consensus 76 -----~~d~Vih~A~~~~~--~~----~~~~~~~~~~nv~gt~~ll~a~~~~~--------------~~~~~v~~SS~~~ 130 (322)
T PLN02662 76 -----GCEGVFHTASPFYH--DV----TDPQAELIDPAVKGTLNVLRSCAKVP--------------SVKRVVVTSSMAA 130 (322)
T ss_pred -----CCCEEEEeCCcccC--CC----CChHHHHHHHHHHHHHHHHHHHHhCC--------------CCCEEEEccCHHH
Confidence 38999999986421 11 11224677889999999999876531 2347999999753
Q ss_pred c-ccccC-------------CC-----CCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC-------
Q psy11190 159 S-IEDNT-------------QG-----GFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN------- 212 (248)
Q Consensus 159 ~-~~~~~-------------~~-----~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~------- 212 (248)
. ++..+ .+ ....|+.+|.+.+.+++.+..+ ++++++.+.|+.+..|.....
T Consensus 131 ~~y~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lRp~~v~Gp~~~~~~~~~~~~ 207 (322)
T PLN02662 131 VAYNGKPLTPDVVVDETWFSDPAFCEESKLWYVLSKTLAEEAAWKFAKE---NGIDMVTINPAMVIGPLLQPTLNTSAEA 207 (322)
T ss_pred hcCCCcCCCCCCcCCcccCCChhHhhcccchHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCcccCCCCCCCCCchHHH
Confidence 2 21100 00 0136999999999888877654 479999999999988753221
Q ss_pred ----------------CCCchhhHHHHHHHHhhhc
Q psy11190 213 ----------------APLEVGAATAGIIQFIQSL 231 (248)
Q Consensus 213 ----------------~~~~~~~~~~~~~~~~~~~ 231 (248)
....++++++.++..+..+
T Consensus 208 ~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~ 242 (322)
T PLN02662 208 ILNLINGAQTFPNASYRWVDVRDVANAHIQAFEIP 242 (322)
T ss_pred HHHHhcCCccCCCCCcCeEEHHHHHHHHHHHhcCc
Confidence 0245688888888887653
|
|
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.2e-15 Score=130.14 Aligned_cols=173 Identities=15% Similarity=0.077 Sum_probs=121.6
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCch--hHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKD--KAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
+++||||+|+||.+++++|+++|. ..+|++.+|... +.+.+..+. ...++.++.+|++|.++ +..+++..
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~--~~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~-~~~~~~~~---- 72 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHP--DAEVIVLDKLTYAGNLENLADLE-DNPRYRFVKGDIGDREL-VSRLFTEH---- 72 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCC--CCEEEEecCCCcchhhhhhhhhc-cCCCcEEEEcCCcCHHH-HHHHHhhc----
Confidence 489999999999999999998761 257888876432 222222221 23467889999999888 76665442
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
++|+|||+|+.... +.+.+..+..+++|+.++.++++.+.+.. .+.+++++||.....
T Consensus 73 ---~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--------------~~~~~i~~Ss~~v~g 130 (317)
T TIGR01181 73 ---QPDAVVHFAAESHV-----DRSISGPAAFIETNVVGTYTLLEAVRKYW--------------HEFRFHHISTDEVYG 130 (317)
T ss_pred ---CCCEEEEcccccCc-----hhhhhCHHHHHHHHHHHHHHHHHHHHhcC--------------CCceEEEeeccceeC
Confidence 39999999986532 12334566778899999999988765542 134799999854322
Q ss_pred cc---------cCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCC
Q psy11190 161 ED---------NTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208 (248)
Q Consensus 161 ~~---------~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~ 208 (248)
.. .+..+...|+.+|.+.+.+++.++.+ .++++..+.|+.+..+.
T Consensus 131 ~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~i~G~~ 184 (317)
T TIGR01181 131 DLEKGDAFTETTPLAPSSPYSASKAASDHLVRAYHRT---YGLPALITRCSNNYGPY 184 (317)
T ss_pred CCCCCCCcCCCCCCCCCCchHHHHHHHHHHHHHHHHH---hCCCeEEEEeccccCCC
Confidence 11 01123457999999999999988766 36888999999877654
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=4.5e-15 Score=129.04 Aligned_cols=171 Identities=15% Similarity=0.087 Sum_probs=120.1
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHH-HHHHHh-----hcCCceeEEeeccCCchhhhhHHH
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVE-LLALAQ-----QHSNLHVIELDVTDFSKQQDVLFK 74 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~-~~~~~~-----~~~~~~~~~~D~~~~~~~v~~~~~ 74 (248)
||++|||||+|.||.+++++|+++| ++|++++|....... ...... ...++.++.+|++|.+. +..++
T Consensus 15 ~~~vlVtGatGfiG~~lv~~L~~~g----~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~-l~~~~- 88 (348)
T PRK15181 15 PKRWLITGVAGFIGSGLLEELLFLN----QTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTD-CQKAC- 88 (348)
T ss_pred CCEEEEECCccHHHHHHHHHHHHCC----CEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHH-HHHHh-
Confidence 5789999999999999999999999 899999986543222 111111 11357789999998766 44432
Q ss_pred HhhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEee
Q psy11190 75 DISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVS 154 (248)
Q Consensus 75 ~i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vs 154 (248)
. ++|+|||.|+...... +.++....+++|+.++.++++.+... +-.++|++|
T Consensus 89 ------~--~~d~ViHlAa~~~~~~-----~~~~~~~~~~~Nv~gt~nll~~~~~~---------------~~~~~v~~S 140 (348)
T PRK15181 89 ------K--NVDYVLHQAALGSVPR-----SLKDPIATNSANIDGFLNMLTAARDA---------------HVSSFTYAA 140 (348)
T ss_pred ------h--CCCEEEECccccCchh-----hhhCHHHHHHHHHHHHHHHHHHHHHc---------------CCCeEEEee
Confidence 1 3899999998653211 22233456788999999998876432 345799999
Q ss_pred cCCCccccc--------CCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCC
Q psy11190 155 SIMGSIEDN--------TQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208 (248)
Q Consensus 155 s~~~~~~~~--------~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~ 208 (248)
|...+.... +..+...|+.+|.+.+.+++.++.+ +++++..+.|+.+..|.
T Consensus 141 S~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~vyGp~ 199 (348)
T PRK15181 141 SSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARS---YEFNAIGLRYFNVFGRR 199 (348)
T ss_pred chHhhCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHHH---hCCCEEEEEecceeCcC
Confidence 875432111 1123457999999999998887654 47899999999887764
|
|
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=99.66 E-value=2.4e-15 Score=130.67 Aligned_cols=166 Identities=16% Similarity=0.143 Sum_probs=115.6
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHH----HHHHHHh-hcCCceeEEeeccCCchhhhhHHHHh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAV----ELLALAQ-QHSNLHVIELDVTDFSKQQDVLFKDI 76 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~----~~~~~~~-~~~~~~~~~~D~~~~~~~v~~~~~~i 76 (248)
|+++||||+|+||.+++++|+++| ++|++++|...... .+..... ...++.++.+|++|.++ +..+++..
T Consensus 6 ~~vlItGatG~iG~~l~~~L~~~g----~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-l~~~~~~~ 80 (352)
T PLN02240 6 RTILVTGGAGYIGSHTVLQLLLAG----YKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEA-LEKVFAST 80 (352)
T ss_pred CEEEEECCCChHHHHHHHHHHHCC----CEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHH-HHHHHHhC
Confidence 689999999999999999999999 89999987543222 1222211 13467889999999888 76665542
Q ss_pred hhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecC
Q psy11190 77 SDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSI 156 (248)
Q Consensus 77 ~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~ 156 (248)
++|+|||+|+.... ..+.++..+.+++|+.++.++++.+.. . +..++|++||.
T Consensus 81 -------~~d~vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~----~-----------~~~~~v~~Ss~ 133 (352)
T PLN02240 81 -------RFDAVIHFAGLKAV-----GESVAKPLLYYDNNLVGTINLLEVMAK----H-----------GCKKLVFSSSA 133 (352)
T ss_pred -------CCCEEEEccccCCc-----cccccCHHHHHHHHHHHHHHHHHHHHH----c-----------CCCEEEEEccH
Confidence 39999999986532 113346677889999999988875432 1 34589999986
Q ss_pred CCcccc--------cCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecC
Q psy11190 157 MGSIED--------NTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHP 201 (248)
Q Consensus 157 ~~~~~~--------~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~P 201 (248)
..+... .+..+...|+.+|.+.+.+++.++.+ ..++++..+.|
T Consensus 134 ~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~--~~~~~~~~~R~ 184 (352)
T PLN02240 134 TVYGQPEEVPCTEEFPLSATNPYGRTKLFIEEICRDIHAS--DPEWKIILLRY 184 (352)
T ss_pred HHhCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHh--cCCCCEEEEee
Confidence 432111 11124568999999999999988755 23455555543
|
|
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.65 E-value=1e-14 Score=127.67 Aligned_cols=194 Identities=12% Similarity=0.099 Sum_probs=131.9
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhh------cCCceeEEeeccCCchhhhhHHH
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQ------HSNLHVIELDVTDFSKQQDVLFK 74 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~v~~~~~ 74 (248)
+|++|||||+|+||++++++|+++| +.|+++.|+.+..+.+.++... ...+.++.+|++|.++ +.++++
T Consensus 53 ~k~VLVTGatGfIG~~lv~~L~~~G----~~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~-l~~~i~ 127 (367)
T PLN02686 53 ARLVCVTGGVSFLGLAIVDRLLRHG----YSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPES-LHEAFD 127 (367)
T ss_pred CCEEEEECCchHHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHH-HHHHHH
Confidence 5789999999999999999999999 8999988887665554332110 1257789999999877 555432
Q ss_pred HhhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEee
Q psy11190 75 DISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVS 154 (248)
Q Consensus 75 ~i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vs 154 (248)
++|.+||.|+...+ ..... ......++|+.++.++++++...- +-.++|++|
T Consensus 128 ---------~~d~V~hlA~~~~~-~~~~~----~~~~~~~~nv~gt~~llea~~~~~--------------~v~r~V~~S 179 (367)
T PLN02686 128 ---------GCAGVFHTSAFVDP-AGLSG----YTKSMAELEAKASENVIEACVRTE--------------SVRKCVFTS 179 (367)
T ss_pred ---------hccEEEecCeeecc-ccccc----ccchhhhhhHHHHHHHHHHHHhcC--------------CccEEEEec
Confidence 27889998886543 11110 112334567777777777654320 134799999
Q ss_pred cCCC-cccc----c-C--------------CCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC--
Q psy11190 155 SIMG-SIED----N-T--------------QGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN-- 212 (248)
Q Consensus 155 s~~~-~~~~----~-~--------------~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~-- 212 (248)
|..+ .++. . + ..+...|+.+|.+.+.+++.++.+ +|++++++.|+.+..|.....
T Consensus 180 S~~~~vyg~~~~~~~~~~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~gl~~v~lRp~~vyGp~~~~~~~ 256 (367)
T PLN02686 180 SLLACVWRQNYPHDLPPVIDEESWSDESFCRDNKLWYALGKLKAEKAAWRAARG---KGLKLATICPALVTGPGFFRRNS 256 (367)
T ss_pred cHHHhcccccCCCCCCcccCCCCCCChhhcccccchHHHHHHHHHHHHHHHHHh---cCceEEEEcCCceECCCCCCCCC
Confidence 8631 1110 0 0 012346999999999999888765 589999999999998843110
Q ss_pred -------------------CCCchhhHHHHHHHHhhh
Q psy11190 213 -------------------APLEVGAATAGIIQFIQS 230 (248)
Q Consensus 213 -------------------~~~~~~~~~~~~~~~~~~ 230 (248)
.....++++++++..+..
T Consensus 257 ~~~~~~~~g~~~~~g~g~~~~v~V~Dva~A~~~al~~ 293 (367)
T PLN02686 257 TATIAYLKGAQEMLADGLLATADVERLAEAHVCVYEA 293 (367)
T ss_pred hhHHHHhcCCCccCCCCCcCeEEHHHHHHHHHHHHhc
Confidence 024578888888887764
|
|
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.65 E-value=1e-14 Score=129.46 Aligned_cols=168 Identities=14% Similarity=0.134 Sum_probs=133.9
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHH-HHHhh--cCCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELL-ALAQQ--HSNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~-~~~~~--~~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
|++|||||+|.||.++++++++.+. .++++++|+.-++..+. ++... ..++.++.+|+.|.+. +..+++.
T Consensus 251 K~vLVTGagGSiGsel~~qil~~~p---~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~-~~~~~~~--- 323 (588)
T COG1086 251 KTVLVTGGGGSIGSELCRQILKFNP---KEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDR-VERAMEG--- 323 (588)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhcCC---CEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHH-HHHHHhc---
Confidence 8999999999999999999999986 89999999998888884 44433 3578899999999877 5444322
Q ss_pred hhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 79 VVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
.++|+++|+|+.--. |.- .....+.+..|+.|+.++++++... +-.++|++|+--+
T Consensus 324 ----~kvd~VfHAAA~KHV--Pl~---E~nP~Eai~tNV~GT~nv~~aa~~~---------------~V~~~V~iSTDKA 379 (588)
T COG1086 324 ----HKVDIVFHAAALKHV--PLV---EYNPEEAIKTNVLGTENVAEAAIKN---------------GVKKFVLISTDKA 379 (588)
T ss_pred ----CCCceEEEhhhhccC--cch---hcCHHHHHHHhhHhHHHHHHHHHHh---------------CCCEEEEEecCcc
Confidence 249999999986322 222 3455667778999999999998876 4567999999887
Q ss_pred cccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceec
Q psy11190 159 SIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKT 206 (248)
Q Consensus 159 ~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t 206 (248)
..| ...|+++|...+.++++++......+=++.+|.-|-|..
T Consensus 380 V~P------tNvmGaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlG 421 (588)
T COG1086 380 VNP------TNVMGATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLG 421 (588)
T ss_pred cCC------chHhhHHHHHHHHHHHHHhhccCCCCcEEEEEEecceec
Confidence 644 578999999999999999987765567888888887754
|
|
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=99.65 E-value=5.8e-15 Score=126.75 Aligned_cols=196 Identities=15% Similarity=0.153 Sum_probs=136.4
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhcC
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVKD 82 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~~ 82 (248)
+++||||+|+||+.+++.|+++| ++|++++|+.+....+. ...+.++++|++|.++ +..++ .
T Consensus 2 ~vlItG~~G~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~-----~~~~~~~~~D~~~~~~-l~~~~-------~- 63 (328)
T TIGR03466 2 KVLVTGATGFVGSAVVRLLLEQG----EEVRVLVRPTSDRRNLE-----GLDVEIVEGDLRDPAS-LRKAV-------A- 63 (328)
T ss_pred eEEEECCccchhHHHHHHHHHCC----CEEEEEEecCccccccc-----cCCceEEEeeCCCHHH-HHHHH-------h-
Confidence 69999999999999999999999 89999999876533221 2357889999999876 54443 2
Q ss_pred CCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcccc
Q psy11190 83 QGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIED 162 (248)
Q Consensus 83 ~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~~ 162 (248)
++|+|||+|+.... ..++.+..+++|+.++.++++.+.+. +-+++|++||.......
T Consensus 64 -~~d~vi~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---------------~~~~~v~~SS~~~~~~~ 120 (328)
T TIGR03466 64 -GCRALFHVAADYRL-------WAPDPEEMYAANVEGTRNLLRAALEA---------------GVERVVYTSSVATLGVR 120 (328)
T ss_pred -CCCEEEEeceeccc-------CCCCHHHHHHHHHHHHHHHHHHHHHh---------------CCCeEEEEechhhcCcC
Confidence 38999999975321 12335667778999988888876532 34689999997654321
Q ss_pred cC---------C---CCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC------------------
Q psy11190 163 NT---------Q---GGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN------------------ 212 (248)
Q Consensus 163 ~~---------~---~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~------------------ 212 (248)
.. . .....|+.+|.+.+.+++.++.+ .++++..+.|+.+..+.....
T Consensus 121 ~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~ 197 (328)
T TIGR03466 121 GDGTPADETTPSSLDDMIGHYKRSKFLAEQAALEMAAE---KGLPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNGKMPAY 197 (328)
T ss_pred CCCCCcCccCCCCcccccChHHHHHHHHHHHHHHHHHh---cCCCEEEEeCCccCCCCCCCCCcHHHHHHHHHcCCCcee
Confidence 00 0 01347999999999999988755 478899999987765432110
Q ss_pred -----CCCchhhHHHHHHHHhhhcccccccceeeeCCe
Q psy11190 213 -----APLEVGAATAGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 213 -----~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
.....+++++.++..+... ..|..+...|.
T Consensus 198 ~~~~~~~i~v~D~a~a~~~~~~~~---~~~~~~~~~~~ 232 (328)
T TIGR03466 198 VDTGLNLVHVDDVAEGHLLALERG---RIGERYILGGE 232 (328)
T ss_pred eCCCcceEEHHHHHHHHHHHHhCC---CCCceEEecCC
Confidence 0235788888888777552 23455554443
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=99.64 E-value=6.7e-16 Score=128.67 Aligned_cols=190 Identities=13% Similarity=0.148 Sum_probs=127.0
Q ss_pred EEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHh-h--cCCce----eEEeeccCCchhhhhHHHHh
Q psy11190 4 ILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQ-Q--HSNLH----VIELDVTDFSKQQDVLFKDI 76 (248)
Q Consensus 4 ~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~-~--~~~~~----~~~~D~~~~~~~v~~~~~~i 76 (248)
+|||||+|.||.+++++|++.+. ..+++++++..++.++..... . ..++. ++.+|+.|.+. +..++
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p---~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~-l~~~~--- 73 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGP---KKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKER-LNRIF--- 73 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB----SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHH-HHHHT---
T ss_pred CEEEccccHHHHHHHHHHHhcCC---CeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHH-HHHHH---
Confidence 69999999999999999999884 799999999999888854442 2 22343 34778887666 44432
Q ss_pred hhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecC
Q psy11190 77 SDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSI 156 (248)
Q Consensus 77 ~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~ 156 (248)
+.+ ++|+|||.|+.-.. ...+ +...+.+..|+.|+.++++++... +-.++|++|+-
T Consensus 74 -~~~---~pdiVfHaAA~KhV-pl~E----~~p~eav~tNv~GT~nv~~aa~~~---------------~v~~~v~ISTD 129 (293)
T PF02719_consen 74 -EEY---KPDIVFHAAALKHV-PLME----DNPFEAVKTNVLGTQNVAEAAIEH---------------GVERFVFISTD 129 (293)
T ss_dssp -T-----T-SEEEE------H-HHHC----CCHHHHHHHHCHHHHHHHHHHHHT---------------T-SEEEEEEEC
T ss_pred -hhc---CCCEEEEChhcCCC-ChHH----hCHHHHHHHHHHHHHHHHHHHHHc---------------CCCEEEEcccc
Confidence 222 49999999986432 2222 345666788999999999998876 45679999998
Q ss_pred CCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCC-------------------CCC---CC
Q psy11190 157 MGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMG-------------------GSN---AP 214 (248)
Q Consensus 157 ~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~-------------------~~~---~~ 214 (248)
-+.. +...|+++|...+.++++.+......+.++.+|.-|-|--.-. .+. ..
T Consensus 130 KAv~------PtnvmGatKrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~GSVip~F~~Qi~~g~PlTvT~p~mtRff 203 (293)
T PF02719_consen 130 KAVN------PTNVMGATKRLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSRGSVIPLFKKQIKNGGPLTVTDPDMTRFF 203 (293)
T ss_dssp GCSS--------SHHHHHHHHHHHHHHHHCCTSSSS--EEEEEEE-EETTGTTSCHHHHHHHHHTTSSEEECETT-EEEE
T ss_pred ccCC------CCcHHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEecceecCCCcHHHHHHHHHHcCCcceeCCCCcEEEE
Confidence 7753 4578999999999999999988867778899988887633211 000 02
Q ss_pred CchhhHHHHHHHHhhh
Q psy11190 215 LEVGAATAGIIQFIQS 230 (248)
Q Consensus 215 ~~~~~~~~~~~~~~~~ 230 (248)
.+++|+.+-++.....
T Consensus 204 mti~EAv~Lvl~a~~~ 219 (293)
T PF02719_consen 204 MTIEEAVQLVLQAAAL 219 (293)
T ss_dssp E-HHHHHHHHHHHHHH
T ss_pred ecHHHHHHHHHHHHhh
Confidence 4678888777776654
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=5.8e-15 Score=127.61 Aligned_cols=165 Identities=15% Similarity=0.136 Sum_probs=111.6
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH-HHHHh-hcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL-LALAQ-QHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~-~~~~~-~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
++|||||+|+||++++++|+++| ++|++++|........ ..... ...++.++.+|++|.+. +..+++.
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~~g----~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~-~~~~~~~----- 71 (338)
T PRK10675 2 RVLVTGGSGYIGSHTCVQLLQNG----HDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEAL-LTEILHD----- 71 (338)
T ss_pred eEEEECCCChHHHHHHHHHHHCC----CeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHH-HHHHHhc-----
Confidence 59999999999999999999999 8999987654332222 11111 12356788999999887 6665442
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
.++|+|||+|+.... .. ..+.....+++|+.++.++++.+. +. +..++|++||...+.
T Consensus 72 --~~~d~vvh~a~~~~~-~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~-----------~~~~~v~~Ss~~~yg 129 (338)
T PRK10675 72 --HAIDTVIHFAGLKAV-GE----SVQKPLEYYDNNVNGTLRLISAMR----AA-----------NVKNLIFSSSATVYG 129 (338)
T ss_pred --CCCCEEEECCccccc-cc----hhhCHHHHHHHHHHHHHHHHHHHH----Hc-----------CCCEEEEeccHHhhC
Confidence 149999999987543 11 122344567789989888877543 32 346799999865321
Q ss_pred ccc--------C-CCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecC
Q psy11190 161 EDN--------T-QGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHP 201 (248)
Q Consensus 161 ~~~--------~-~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~P 201 (248)
... + ..+...|+.+|.+.+.+++.++++.. ++++..+.|
T Consensus 130 ~~~~~~~~E~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~--~~~~~ilR~ 177 (338)
T PRK10675 130 DQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQP--DWSIALLRY 177 (338)
T ss_pred CCCCCccccccCCCCCCChhHHHHHHHHHHHHHHHHhcC--CCcEEEEEe
Confidence 110 0 02356899999999999999876532 355555543
|
|
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=6.4e-15 Score=128.14 Aligned_cols=201 Identities=11% Similarity=0.069 Sum_probs=131.3
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCce-EEEeecCc--hhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAH-IFATCRNK--DKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~-V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
++|||||+|+||.+++++|+++| .. |+..++.. .....+..+ ....++.++.+|++|.++ +++++++.
T Consensus 2 kilITGgtG~iG~~l~~~L~~~g----~~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~-~~~~~~~~--- 72 (352)
T PRK10084 2 KILVTGGAGFIGSAVVRHIINNT----QDSVVNVDKLTYAGNLESLADV-SDSERYVFEHADICDRAE-LDRIFAQH--- 72 (352)
T ss_pred eEEEECCCcHHhHHHHHHHHHhC----CCeEEEecCCCccchHHHHHhc-ccCCceEEEEecCCCHHH-HHHHHHhc---
Confidence 58999999999999999999999 54 55455432 122222221 113457789999999888 77766542
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
++|+|||+|+.... . .+.+..+..+++|+.++.++++.+.+.+....... .+..++|++||.+.+
T Consensus 73 ----~~d~vih~A~~~~~-~----~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~------~~~~~~i~~SS~~vy 137 (352)
T PRK10084 73 ----QPDAVMHLAAESHV-D----RSITGPAAFIETNIVGTYVLLEAARNYWSALDEDK------KNAFRFHHISTDEVY 137 (352)
T ss_pred ----CCCEEEECCcccCC-c----chhcCchhhhhhhhHHHHHHHHHHHHhcccccccc------ccceeEEEecchhhc
Confidence 39999999986432 1 12234466899999999999999987654211000 013479999986533
Q ss_pred ccc------------------cCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC---------
Q psy11190 160 IED------------------NTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN--------- 212 (248)
Q Consensus 160 ~~~------------------~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~--------- 212 (248)
... .+..+...|+.+|.+.+.+++.++.++ ++++..+.|+.+..|.....
T Consensus 138 g~~~~~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~vilr~~~v~Gp~~~~~~~~~~~~~~ 214 (352)
T PRK10084 138 GDLPHPDEVENSEELPLFTETTAYAPSSPYSASKASSDHLVRAWLRTY---GLPTIVTNCSNNYGPYHFPEKLIPLVILN 214 (352)
T ss_pred CCCCccccccccccCCCccccCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeccceeCCCcCccchHHHHHHH
Confidence 210 112345689999999999999988764 45555566655544331100
Q ss_pred -----------------CCCchhhHHHHHHHHhhh
Q psy11190 213 -----------------APLEVGAATAGIIQFIQS 230 (248)
Q Consensus 213 -----------------~~~~~~~~~~~~~~~~~~ 230 (248)
....++++++.++..+..
T Consensus 215 ~~~~~~~~~~~~g~~~~~~v~v~D~a~a~~~~l~~ 249 (352)
T PRK10084 215 ALEGKPLPIYGKGDQIRDWLYVEDHARALYKVVTE 249 (352)
T ss_pred HhcCCCeEEeCCCCeEEeeEEHHHHHHHHHHHHhc
Confidence 024578888888777654
|
|
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.8e-14 Score=121.47 Aligned_cols=208 Identities=19% Similarity=0.173 Sum_probs=143.2
Q ss_pred EEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhcCCC
Q psy11190 5 LITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVKDQG 84 (248)
Q Consensus 5 lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~~~~ 84 (248)
|||||+|.||++++++|+++|. -..|.++++........ .....+...++++|++|.++ +..++ . +
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~--~~~Vr~~d~~~~~~~~~--~~~~~~~~~~~~~Di~d~~~-l~~a~-------~--g 66 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGY--IYEVRVLDRSPPPKFLK--DLQKSGVKEYIQGDITDPES-LEEAL-------E--G 66 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCC--ceEEEEcccccccccch--hhhcccceeEEEeccccHHH-HHHHh-------c--C
Confidence 6999999999999999999993 25788888776542211 11112233489999999888 54432 2 4
Q ss_pred ccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccccc-
Q psy11190 85 LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDN- 163 (248)
Q Consensus 85 iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~~~- 163 (248)
+|+|||.|+.... .. ....+..+++|+.|+-++++++... +-.++|++||........
T Consensus 67 ~d~V~H~Aa~~~~-~~-----~~~~~~~~~vNV~GT~nvl~aa~~~---------------~VkrlVytSS~~vv~~~~~ 125 (280)
T PF01073_consen 67 VDVVFHTAAPVPP-WG-----DYPPEEYYKVNVDGTRNVLEAARKA---------------GVKRLVYTSSISVVFDNYK 125 (280)
T ss_pred CceEEEeCccccc-cC-----cccHHHHHHHHHHHHHHHHHHHHHc---------------CCCEEEEEcCcceeEeccC
Confidence 8999999987644 11 3456778889999999999987653 456899999998776510
Q ss_pred --CC-----------CCCccchhhHHHHHHHHHHHHh-hcc-CCCeEEEEecCcceecCCCCCCC---------------
Q psy11190 164 --TQ-----------GGFHPYRCSKAALNAATRSLSI-DLK-GDKIIATAMHPGWVKTDMGGSNA--------------- 213 (248)
Q Consensus 164 --~~-----------~~~~~y~~sK~a~~~~~~~la~-e~~-~~~i~v~~v~PG~v~t~~~~~~~--------------- 213 (248)
+. .....|+.||+..+.++..... .+. ...++..+|.|..|..|......
T Consensus 126 ~~~~~~~dE~~~~~~~~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~~~~~~~g~~~~~ 205 (280)
T PF01073_consen 126 GDPIINGDEDTPYPSSPLDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVPRLVKMVRSGLFLFQ 205 (280)
T ss_pred CCCcccCCcCCcccccccCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCcccccccchhhHHHHhccccee
Confidence 00 1334799999999999877654 222 12589999999999887432211
Q ss_pred ---------CCchhhHHHHHHHHhhhc------ccccccceeeeCCeec
Q psy11190 214 ---------PLEVGAATAGIIQFIQSL------GEAHNGGFFEYTGKAI 247 (248)
Q Consensus 214 ---------~~~~~~~~~~~~~~~~~~------~~~~~g~~~~~~g~~~ 247 (248)
....+.++++.+...... .......|+--|++++
T Consensus 206 ~g~~~~~~~~vyV~NvA~ahvlA~~~L~~~~~~~~~~G~~y~itd~~p~ 254 (280)
T PF01073_consen 206 IGDGNNLFDFVYVENVAHAHVLAAQALLEPGKPERVAGQAYFITDGEPV 254 (280)
T ss_pred ecCCCceECcEeHHHHHHHHHHHHHHhccccccccCCCcEEEEECCCcc
Confidence 245888888887665432 2234445666677665
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=99.62 E-value=8.8e-15 Score=125.39 Aligned_cols=170 Identities=21% Similarity=0.184 Sum_probs=118.4
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHH-HHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVE-LLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
++|||||+|+||++++++|+++| ++|++.+|......+ +.... ...++..+.+|+++.++ +..+++.
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g----~~V~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~-~~~~~~~------ 68 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESG----HEVVVLDNLSNGSPEALKRGE-RITRVTFVEGDLRDREL-LDRLFEE------ 68 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCC----CeEEEEeCCCccchhhhhhhc-cccceEEEECCCCCHHH-HHHHHHh------
Confidence 47999999999999999999999 889888764433222 22221 12257788999999888 7666542
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
.++|++||+||.... . .+.++..+.+..|+.+...+++.+.+. +..+++++||...+..
T Consensus 69 -~~~d~vv~~ag~~~~-~----~~~~~~~~~~~~n~~~~~~l~~~~~~~---------------~~~~~v~~ss~~~~g~ 127 (328)
T TIGR01179 69 -HKIDAVIHFAGLIAV-G----ESVQDPLKYYRNNVVNTLNLLEAMQQT---------------GVKKFIFSSSAAVYGE 127 (328)
T ss_pred -CCCcEEEECccccCc-c----hhhcCchhhhhhhHHHHHHHHHHHHhc---------------CCCEEEEecchhhcCC
Confidence 149999999997533 1 123344567788999999888764332 3468999888654321
Q ss_pred cc--------CCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecC
Q psy11190 162 DN--------TQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTD 207 (248)
Q Consensus 162 ~~--------~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~ 207 (248)
.. +..+...|+.+|++++.+++.++++ ..++++..+.|+.+..+
T Consensus 128 ~~~~~~~e~~~~~~~~~y~~sK~~~e~~~~~~~~~--~~~~~~~ilR~~~v~g~ 179 (328)
T TIGR01179 128 PSSIPISEDSPLGPINPYGRSKLMSERILRDLSKA--DPGLSYVILRYFNVAGA 179 (328)
T ss_pred CCCCCccccCCCCCCCchHHHHHHHHHHHHHHHHh--ccCCCEEEEecCcccCC
Confidence 10 1123467999999999999998765 24688888888665544
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=99.61 E-value=3.5e-14 Score=116.18 Aligned_cols=166 Identities=19% Similarity=0.186 Sum_probs=121.6
Q ss_pred EEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhcCC
Q psy11190 4 ILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVKDQ 83 (248)
Q Consensus 4 ~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~~~ 83 (248)
+|||||+|.||.+++++|+++| ..|+.+.|........... .++.++.+|+.|.+. ++.+++..
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g----~~v~~~~~~~~~~~~~~~~----~~~~~~~~dl~~~~~-~~~~~~~~------- 64 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKG----HEVIVLSRSSNSESFEEKK----LNVEFVIGDLTDKEQ-LEKLLEKA------- 64 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTT----TEEEEEESCSTGGHHHHHH----TTEEEEESETTSHHH-HHHHHHHH-------
T ss_pred EEEEccCCHHHHHHHHHHHHcC----Ccccccccccccccccccc----ceEEEEEeecccccc-cccccccc-------
Confidence 6999999999999999999999 8888888877654332211 178899999998887 77766555
Q ss_pred CccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccccc
Q psy11190 84 GLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDN 163 (248)
Q Consensus 84 ~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~~~ 163 (248)
.+|.|||+|+.... ..+.+.....++.|+.+..++++.+... +..+++++||........
T Consensus 65 ~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~~~~---------------~~~~~i~~sS~~~y~~~~ 124 (236)
T PF01370_consen 65 NIDVVIHLAAFSSN-----PESFEDPEEIIEANVQGTRNLLEAAREA---------------GVKRFIFLSSASVYGDPD 124 (236)
T ss_dssp TESEEEEEBSSSSH-----HHHHHSHHHHHHHHHHHHHHHHHHHHHH---------------TTSEEEEEEEGGGGTSSS
T ss_pred CceEEEEeeccccc-----cccccccccccccccccccccccccccc---------------cccccccccccccccccc
Confidence 29999999987521 1122445566666776666666665543 446899999954332221
Q ss_pred C--------CCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCC
Q psy11190 164 T--------QGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208 (248)
Q Consensus 164 ~--------~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~ 208 (248)
. ..+...|+.+|...+.+.+.+.... ++++..+.|+.+..|.
T Consensus 125 ~~~~~e~~~~~~~~~Y~~~K~~~e~~~~~~~~~~---~~~~~~~R~~~vyG~~ 174 (236)
T PF01370_consen 125 GEPIDEDSPINPLSPYGASKRAAEELLRDYAKKY---GLRVTILRPPNVYGPG 174 (236)
T ss_dssp SSSBETTSGCCHSSHHHHHHHHHHHHHHHHHHHH---TSEEEEEEESEEESTT
T ss_pred cccccccccccccccccccccccccccccccccc---cccccccccccccccc
Confidence 1 1234569999999999999888764 7999999999998888
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=99.60 E-value=8.6e-14 Score=120.98 Aligned_cols=171 Identities=16% Similarity=0.179 Sum_probs=115.1
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHH---HHHHHHhh--------c-CCceeEEeeccCCchh-h
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAV---ELLALAQQ--------H-SNLHVIELDVTDFSKQ-Q 69 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~---~~~~~~~~--------~-~~~~~~~~D~~~~~~~-v 69 (248)
+++||||||+||++++++|+++|. ..+|+++.|+.+... .+.+.... . .++.++.+|++++..- .
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~--~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~ 78 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRST--QAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLS 78 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCC--CCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcC
Confidence 589999999999999999999872 147999999876322 22211111 0 4788999999875310 0
Q ss_pred hhHHHHhhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCce
Q psy11190 70 DVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAA 149 (248)
Q Consensus 70 ~~~~~~i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~ 149 (248)
......+. . ++|+|||||+.... . ..++..+.+|+.++.++++.+... +..+
T Consensus 79 ~~~~~~~~---~--~~d~vih~a~~~~~-----~---~~~~~~~~~nv~g~~~ll~~a~~~---------------~~~~ 130 (367)
T TIGR01746 79 DAEWERLA---E--NVDTIVHNGALVNW-----V---YPYSELRAANVLGTREVLRLAASG---------------RAKP 130 (367)
T ss_pred HHHHHHHH---h--hCCEEEeCCcEecc-----C---CcHHHHhhhhhHHHHHHHHHHhhC---------------CCce
Confidence 11112222 2 49999999986532 1 224555678999988887765432 2345
Q ss_pred EEEeecCCCcccccC-------------CCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecC
Q psy11190 150 IVNVSSIMGSIEDNT-------------QGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTD 207 (248)
Q Consensus 150 iv~vss~~~~~~~~~-------------~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~ 207 (248)
++++||......... ......|+.+|.+.+.+++.++. .|++++.+.||.+..+
T Consensus 131 ~v~iSS~~v~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~i~Rpg~v~G~ 197 (367)
T TIGR01746 131 LHYVSTISVLAAIDLSTVTEDDAIVTPPPGLAGGYAQSKWVAELLVREASD----RGLPVTIVRPGRILGN 197 (367)
T ss_pred EEEEccccccCCcCCCCccccccccccccccCCChHHHHHHHHHHHHHHHh----cCCCEEEECCCceeec
Confidence 999999876543110 01234799999999998876653 3899999999999875
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.59 E-value=9.9e-14 Score=114.03 Aligned_cols=176 Identities=16% Similarity=0.100 Sum_probs=130.1
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCc--hhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNK--DKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
+++|||||.|.||.++++.++++.. -.+|+.++.-. ...+.+..+. ..++..++++|++|.+. +.+++++-
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~--d~~v~~~DkLTYAgn~~~l~~~~-~~~~~~fv~~DI~D~~~-v~~~~~~~--- 73 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHP--DDHVVNLDKLTYAGNLENLADVE-DSPRYRFVQGDICDREL-VDRLFKEY--- 73 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCC--CceEEEEecccccCCHHHHHhhh-cCCCceEEeccccCHHH-HHHHHHhc---
Confidence 3699999999999999999999883 35677776532 2333343333 35689999999999777 66654433
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
.+|+++|-|+-+-. +.+.+.-+..++.|+.|++.+++++..++. .-+++-||.-.-+
T Consensus 74 ----~~D~VvhfAAESHV-----DRSI~~P~~Fi~TNv~GT~~LLEaar~~~~--------------~frf~HISTDEVY 130 (340)
T COG1088 74 ----QPDAVVHFAAESHV-----DRSIDGPAPFIQTNVVGTYTLLEAARKYWG--------------KFRFHHISTDEVY 130 (340)
T ss_pred ----CCCeEEEechhccc-----cccccChhhhhhcchHHHHHHHHHHHHhcc--------------cceEEEecccccc
Confidence 39999999986643 456677777888999999999999888753 2368888864422
Q ss_pred --ccc--------cCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCC
Q psy11190 160 --IED--------NTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGG 210 (248)
Q Consensus 160 --~~~--------~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~ 210 (248)
... .++.+.+.|++|||+-..|++++.+- +|+.++...+.--..|-..
T Consensus 131 G~l~~~~~~FtE~tp~~PsSPYSASKAasD~lVray~~T---Yglp~~ItrcSNNYGPyqf 188 (340)
T COG1088 131 GDLGLDDDAFTETTPYNPSSPYSASKAASDLLVRAYVRT---YGLPATITRCSNNYGPYQF 188 (340)
T ss_pred ccccCCCCCcccCCCCCCCCCcchhhhhHHHHHHHHHHH---cCCceEEecCCCCcCCCcC
Confidence 111 34567889999999999999999977 4678887777666555543
|
|
| >KOG4022|consensus | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.8e-13 Score=103.02 Aligned_cols=209 Identities=12% Similarity=0.134 Sum_probs=147.2
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCce-eEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLH-VIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
++++|-||-+.+|.++++.|-.++ +.|.-++-...+ ..... ++..|-+=.++ .+.+++++.+.+
T Consensus 4 grVivYGGkGALGSacv~~Fkann----ywV~siDl~eNe----------~Ad~sI~V~~~~swtEQ-e~~v~~~vg~sL 68 (236)
T KOG4022|consen 4 GRVIVYGGKGALGSACVEFFKANN----YWVLSIDLSENE----------QADSSILVDGNKSWTEQ-EQSVLEQVGSSL 68 (236)
T ss_pred ceEEEEcCcchHhHHHHHHHHhcC----eEEEEEeecccc----------cccceEEecCCcchhHH-HHHHHHHHHHhh
Confidence 479999999999999999999999 888888765432 11122 22233322333 778888888877
Q ss_pred cCCCccEEEeccccCCccccC-CCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRL-GLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
+..++|.++|-||.+.....- .++ .+..+-.|.-.+.....-.+.+..+|+ +.|-+-....-++.
T Consensus 69 ~gekvDav~CVAGGWAGGnAksKdl-~KNaDLMwKQSvwtSaIsa~lAt~HLK-------------~GGLL~LtGAkaAl 134 (236)
T KOG4022|consen 69 QGEKVDAVFCVAGGWAGGNAKSKDL-VKNADLMWKQSVWTSAISAKLATTHLK-------------PGGLLQLTGAKAAL 134 (236)
T ss_pred cccccceEEEeeccccCCCcchhhh-hhchhhHHHHHHHHHHHHHHHHHhccC-------------CCceeeeccccccc
Confidence 656799999999987542211 111 123333444444444444555555554 34555555554554
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHhhcc--CCCeEEEEecCcceecCCCCCCCC-------CchhhHHHHHHHHhhh
Q psy11190 160 IEDNTQGGFHPYRCSKAALNAATRSLSIDLK--GDKIIATAMHPGWVKTDMGGSNAP-------LEVGAATAGIIQFIQS 230 (248)
Q Consensus 160 ~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~--~~~i~v~~v~PG~v~t~~~~~~~~-------~~~~~~~~~~~~~~~~ 230 (248)
-+. |++..|+.+|+|++.++++|+.+-. |.|-.+..|-|-..||||++...+ .+.+.+...++++...
T Consensus 135 ~gT---PgMIGYGMAKaAVHqLt~SLaak~SGlP~gsaa~~ilPVTLDTPMNRKwMP~ADfssWTPL~fi~e~flkWtt~ 211 (236)
T KOG4022|consen 135 GGT---PGMIGYGMAKAAVHQLTSSLAAKDSGLPDGSAALTILPVTLDTPMNRKWMPNADFSSWTPLSFISEHFLKWTTE 211 (236)
T ss_pred CCC---CcccchhHHHHHHHHHHHHhcccccCCCCCceeEEEeeeeccCccccccCCCCcccCcccHHHHHHHHHHHhcc
Confidence 444 8899999999999999999998764 678899999999999999987653 5678899999999988
Q ss_pred cccccccceeee
Q psy11190 231 LGEAHNGGFFEY 242 (248)
Q Consensus 231 ~~~~~~g~~~~~ 242 (248)
.++..+|.++..
T Consensus 212 ~~RPssGsLlqi 223 (236)
T KOG4022|consen 212 TSRPSSGSLLQI 223 (236)
T ss_pred CCCCCCCceEEE
Confidence 888888877653
|
|
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=99.58 E-value=7.1e-14 Score=123.27 Aligned_cols=196 Identities=15% Similarity=0.162 Sum_probs=132.2
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHH---HHHHHhhcCCceeEEeeccCCchhhhhHHHHhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVE---LLALAQQHSNLHVIELDVTDFSKQQDVLFKDIS 77 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~---~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~ 77 (248)
+++++||||+|.||++++++|+++| ++|++++|+.+.... ..+......++.++++|++|.++ +..+++.+.
T Consensus 60 ~~kVLVtGatG~IG~~l~~~Ll~~G----~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~-l~~~~~~~~ 134 (390)
T PLN02657 60 DVTVLVVGATGYIGKFVVRELVRRG----YNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADS-LRKVLFSEG 134 (390)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCC----CEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHH-HHHHHHHhC
Confidence 3579999999999999999999999 899999998765321 11222224578899999999988 777765442
Q ss_pred hhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCC
Q psy11190 78 DVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIM 157 (248)
Q Consensus 78 ~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~ 157 (248)
. ++|+||||++.... . ....+++|+.++.++++.+. +. +-.++|++||.+
T Consensus 135 ~-----~~D~Vi~~aa~~~~-~---------~~~~~~vn~~~~~~ll~aa~----~~-----------gv~r~V~iSS~~ 184 (390)
T PLN02657 135 D-----PVDVVVSCLASRTG-G---------VKDSWKIDYQATKNSLDAGR----EV-----------GAKHFVLLSAIC 184 (390)
T ss_pred C-----CCcEEEECCccCCC-C---------CccchhhHHHHHHHHHHHHH----Hc-----------CCCEEEEEeecc
Confidence 1 49999999875321 1 11234567777776666653 32 456899999986
Q ss_pred CcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCC------C--------------CCCCch
Q psy11190 158 GSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGG------S--------------NAPLEV 217 (248)
Q Consensus 158 ~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~------~--------------~~~~~~ 217 (248)
.. .+...|..+|...+...+. ...+++...+.|+.+..++.. . ..+...
T Consensus 185 v~------~p~~~~~~sK~~~E~~l~~-----~~~gl~~tIlRp~~~~~~~~~~~~~~~~g~~~~~~GdG~~~~~~~I~v 253 (390)
T PLN02657 185 VQ------KPLLEFQRAKLKFEAELQA-----LDSDFTYSIVRPTAFFKSLGGQVEIVKDGGPYVMFGDGKLCACKPISE 253 (390)
T ss_pred cc------CcchHHHHHHHHHHHHHHh-----ccCCCCEEEEccHHHhcccHHHHHhhccCCceEEecCCcccccCceeH
Confidence 53 2344678889888876544 245799999999876533210 0 012456
Q ss_pred hhHHHHHHHHhhhcccccccceeeeCC
Q psy11190 218 GAATAGIIQFIQSLGEAHNGGFFEYTG 244 (248)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~g~~~~~~g 244 (248)
++++..++..+.+. ...+..|..-|
T Consensus 254 ~DlA~~i~~~~~~~--~~~~~~~~Igg 278 (390)
T PLN02657 254 ADLASFIADCVLDE--SKINKVLPIGG 278 (390)
T ss_pred HHHHHHHHHHHhCc--cccCCEEEcCC
Confidence 78888888877542 23445666544
|
|
| >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.56 E-value=8.5e-14 Score=114.83 Aligned_cols=151 Identities=17% Similarity=0.148 Sum_probs=112.3
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhcC
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVKD 82 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~~ 82 (248)
++|||||+|-||.+++.+|++.| +.|++++.....-.+..... ...+++.|+.|.+- ..+++++-
T Consensus 2 ~iLVtGGAGYIGSHtv~~Ll~~G----~~vvV~DNL~~g~~~~v~~~----~~~f~~gDi~D~~~-L~~vf~~~------ 66 (329)
T COG1087 2 KVLVTGGAGYIGSHTVRQLLKTG----HEVVVLDNLSNGHKIALLKL----QFKFYEGDLLDRAL-LTAVFEEN------ 66 (329)
T ss_pred eEEEecCcchhHHHHHHHHHHCC----CeEEEEecCCCCCHHHhhhc----cCceEEeccccHHH-HHHHHHhc------
Confidence 69999999999999999999999 99999998765433322111 16799999999776 55443332
Q ss_pred CCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcccc
Q psy11190 83 QGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIED 162 (248)
Q Consensus 83 ~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~~ 162 (248)
++|.|||-||.... .++.+.-.+.++.|+.+++.|++++... +-..||| ||.++.++.
T Consensus 67 -~idaViHFAa~~~V-----gESv~~Pl~Yy~NNv~gTl~Ll~am~~~---------------gv~~~vF-SStAavYG~ 124 (329)
T COG1087 67 -KIDAVVHFAASISV-----GESVQNPLKYYDNNVVGTLNLIEAMLQT---------------GVKKFIF-SSTAAVYGE 124 (329)
T ss_pred -CCCEEEECcccccc-----chhhhCHHHHHhhchHhHHHHHHHHHHh---------------CCCEEEE-ecchhhcCC
Confidence 49999999997654 2356666778888999999998887665 3334554 555666655
Q ss_pred c---------CCCCCccchhhHHHHHHHHHHHHhhcc
Q psy11190 163 N---------TQGGFHPYRCSKAALNAATRSLSIDLK 190 (248)
Q Consensus 163 ~---------~~~~~~~y~~sK~a~~~~~~~la~e~~ 190 (248)
+ +..+...|+.||...+.+.+.+++...
T Consensus 125 p~~~PI~E~~~~~p~NPYG~sKlm~E~iL~d~~~a~~ 161 (329)
T COG1087 125 PTTSPISETSPLAPINPYGRSKLMSEEILRDAAKANP 161 (329)
T ss_pred CCCcccCCCCCCCCCCcchhHHHHHHHHHHHHHHhCC
Confidence 2 223556899999999999999987754
|
|
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=99.55 E-value=8.7e-14 Score=122.63 Aligned_cols=169 Identities=15% Similarity=0.141 Sum_probs=114.0
Q ss_pred ceEEEecCCCchhHHHHHHHHhC-CCCCCceEEEeecCchhHHHHHHHH--hhcCCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGL-GNNQPAHIFATCRNKDKAVELLALA--QQHSNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~-g~~~~~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
|++|||||+|.||++++++|+++ | +.|++++|+.+....+.... ....++.++.+|++|.+. +..++
T Consensus 15 ~~VlVTGgtGfIGs~lv~~L~~~~g----~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~-l~~~~----- 84 (386)
T PLN02427 15 LTICMIGAGGFIGSHLCEKLMTETP----HKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSR-LEGLI----- 84 (386)
T ss_pred cEEEEECCcchHHHHHHHHHHhcCC----CEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHH-HHHHh-----
Confidence 47999999999999999999998 5 89999998866544332111 012368899999999776 54432
Q ss_pred hhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 79 VVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
. ++|+|||+|+...+ ..... .+ ...+..|+.+..++++++... + .++|++||...
T Consensus 85 --~--~~d~ViHlAa~~~~-~~~~~-~~---~~~~~~n~~gt~~ll~aa~~~---------------~-~r~v~~SS~~v 139 (386)
T PLN02427 85 --K--MADLTINLAAICTP-ADYNT-RP---LDTIYSNFIDALPVVKYCSEN---------------N-KRLIHFSTCEV 139 (386)
T ss_pred --h--cCCEEEEcccccCh-hhhhh-Ch---HHHHHHHHHHHHHHHHHHHhc---------------C-CEEEEEeeeee
Confidence 1 28999999987543 11111 11 122345888888877665321 2 57999998653
Q ss_pred cccc--------cCC----------------------CCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCC
Q psy11190 159 SIED--------NTQ----------------------GGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208 (248)
Q Consensus 159 ~~~~--------~~~----------------------~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~ 208 (248)
+-.. .+. .+...|+.+|.+.+.+++.++.. +++++..+.|+.+..|.
T Consensus 140 Yg~~~~~~~~e~~p~~~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~ 216 (386)
T PLN02427 140 YGKTIGSFLPKDHPLRQDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPR 216 (386)
T ss_pred eCCCcCCCCCcccccccccccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhh---cCCceEEecccceeCCC
Confidence 2110 000 01236999999999998876543 47899999998887663
|
|
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.5e-13 Score=119.39 Aligned_cols=165 Identities=20% Similarity=0.194 Sum_probs=112.2
Q ss_pred CceEEEecCCCchhHHHHHHHHhC-CCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeecc-CCchhhhhHHHHhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGL-GNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVT-DFSKQQDVLFKDISD 78 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~-g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~v~~~~~~i~~ 78 (248)
||++|||||+|.||++++++|+++ | ++|+.++|+.+.... +. ....+.++.+|++ +.+. +..+
T Consensus 1 m~~ilVtGatGfiGs~l~~~L~~~~~----~~V~~~~r~~~~~~~---~~-~~~~~~~~~~Dl~~~~~~-~~~~------ 65 (347)
T PRK11908 1 MKKVLILGVNGFIGHHLSKRILETTD----WEVYGMDMQTDRLGD---LV-NHPRMHFFEGDITINKEW-IEYH------ 65 (347)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhCCC----CeEEEEeCcHHHHHH---hc-cCCCeEEEeCCCCCCHHH-HHHH------
Confidence 788999999999999999999986 5 899999987643222 11 1246888999998 4333 2222
Q ss_pred hhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 79 VVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
+. ++|+|||+|+...+.. ..++-+..+++|+.++.++++.+... + .++|++||...
T Consensus 66 -~~--~~d~ViH~aa~~~~~~-----~~~~p~~~~~~n~~~~~~ll~aa~~~---------------~-~~~v~~SS~~v 121 (347)
T PRK11908 66 -VK--KCDVILPLVAIATPAT-----YVKQPLRVFELDFEANLPIVRSAVKY---------------G-KHLVFPSTSEV 121 (347)
T ss_pred -Hc--CCCEEEECcccCChHH-----hhcCcHHHHHHHHHHHHHHHHHHHhc---------------C-CeEEEEeccee
Confidence 22 3999999998754311 12233456678898988877765432 3 57999999753
Q ss_pred ccccc------CC---------CCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecC
Q psy11190 159 SIEDN------TQ---------GGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTD 207 (248)
Q Consensus 159 ~~~~~------~~---------~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~ 207 (248)
+.... .. .+...|+.+|.+.+.+++.++.. +++++..+.|+.+..|
T Consensus 122 yg~~~~~~~~ee~~~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilR~~~v~Gp 182 (347)
T PRK11908 122 YGMCPDEEFDPEASPLVYGPINKPRWIYACSKQLMDRVIWAYGME---EGLNFTLFRPFNWIGP 182 (347)
T ss_pred eccCCCcCcCccccccccCcCCCccchHHHHHHHHHHHHHHHHHH---cCCCeEEEeeeeeeCC
Confidence 32110 00 11236999999999998887754 4677777877766554
|
|
| >PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function | Back alignment and domain information |
|---|
Probab=99.51 E-value=5.6e-13 Score=111.55 Aligned_cols=187 Identities=17% Similarity=0.243 Sum_probs=152.7
Q ss_pred ceEEEecC-CCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGC-NRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGa-s~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
.+++|.|. +.-|++.+|..|-++| +.|+++..+.++.+..++.. ...+.....|..+..+ +...+.++.+.+
T Consensus 4 evVvI~Gs~~~PltR~la~DLeRRG----FIV~v~~~~~ed~~~ve~e~--~~dI~~L~ld~~~~~~-~~~~l~~f~~~L 76 (299)
T PF08643_consen 4 EVVVIAGSPHDPLTRSLALDLERRG----FIVYVTVSSAEDEKYVESED--RPDIRPLWLDDSDPSS-IHASLSRFASLL 76 (299)
T ss_pred eEEEEECCCCCccHHHHHHHHhhCC----eEEEEEeCCHHHHHHHHhcc--CCCCCCcccCCCCCcc-hHHHHHHHHHHh
Confidence 47889996 7999999999999999 99999999987755544333 4568888899988888 787777777776
Q ss_pred cCC------------CccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCc
Q psy11190 81 KDQ------------GLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRA 148 (248)
Q Consensus 81 ~~~------------~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~ 148 (248)
... .+..||.......+.++++.++.+.|.+.++.|+..++.+++.++|+|+.+.. .+.
T Consensus 77 ~~p~~p~~~~~~h~l~L~svi~~Psl~yp~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~---------~~~ 147 (299)
T PF08643_consen 77 SRPHVPFPGAPPHHLQLKSVIFIPSLSYPTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSN---------QKS 147 (299)
T ss_pred cCCCCCCCCCCCceeEEEEEEEecCCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC---------CCc
Confidence 532 35667777666666688999999999999999999999999999999998421 345
Q ss_pred eEEEee-cCCCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecC
Q psy11190 149 AIVNVS-SIMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTD 207 (248)
Q Consensus 149 ~iv~vs-s~~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~ 207 (248)
+||.++ |+...+.. +-.+.-.....++.+|+++|++|+.++||.|..+..|.++-.
T Consensus 148 ~iil~~Psi~ssl~~---PfhspE~~~~~al~~~~~~LrrEl~~~~I~V~~i~LG~l~i~ 204 (299)
T PF08643_consen 148 KIILFNPSISSSLNP---PFHSPESIVSSALSSFFTSLRRELRPHNIDVTQIKLGNLDIG 204 (299)
T ss_pred eEEEEeCchhhccCC---CccCHHHHHHHHHHHHHHHHHHHhhhcCCceEEEEeeeeccc
Confidence 555554 66666665 666778889999999999999999999999999999999877
|
One of the proteins P32792 from SWISSPROT has been localised to the mitochondria []. |
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.50 E-value=3.2e-13 Score=126.95 Aligned_cols=175 Identities=14% Similarity=0.062 Sum_probs=118.4
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCc--hhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNK--DKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
+|++|||||+|.||++++++|+++| .+++|+.++|.. +....+... ....++.++.+|++|.+. +..++..
T Consensus 6 ~~~VLVTGatGfIG~~lv~~Ll~~g--~~~~V~~~d~~~~~~~~~~l~~~-~~~~~v~~~~~Dl~d~~~-~~~~~~~--- 78 (668)
T PLN02260 6 PKNILITGAAGFIASHVANRLIRNY--PDYKIVVLDKLDYCSNLKNLNPS-KSSPNFKFVKGDIASADL-VNYLLIT--- 78 (668)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHhC--CCCEEEEEeCCCccchhhhhhhc-ccCCCeEEEECCCCChHH-HHHHHhh---
Confidence 4689999999999999999999984 127899888753 222222111 123468899999999776 5443211
Q ss_pred hhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 79 VVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
.++|+|||+|+.... . .+.++....+++|+.++.++++.+... + ...++|++||...
T Consensus 79 ----~~~D~ViHlAa~~~~-~----~~~~~~~~~~~~Nv~gt~~ll~a~~~~----~----------~vkr~I~~SS~~v 135 (668)
T PLN02260 79 ----EGIDTIMHFAAQTHV-D----NSFGNSFEFTKNNIYGTHVLLEACKVT----G----------QIRRFIHVSTDEV 135 (668)
T ss_pred ----cCCCEEEECCCccCc-h----hhhhCHHHHHHHHHHHHHHHHHHHHhc----C----------CCcEEEEEcchHH
Confidence 149999999997543 1 112223455678998888887775432 0 1458999999653
Q ss_pred ccccc-----------CCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCC
Q psy11190 159 SIEDN-----------TQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208 (248)
Q Consensus 159 ~~~~~-----------~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~ 208 (248)
+-... +..+...|+.+|.+.+.+++.++.+ .++++..+.|+.+..|.
T Consensus 136 yg~~~~~~~~~~~E~~~~~p~~~Y~~sK~~aE~~v~~~~~~---~~l~~vilR~~~VyGp~ 193 (668)
T PLN02260 136 YGETDEDADVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPN 193 (668)
T ss_pred hCCCccccccCccccCCCCCCCCcHHHHHHHHHHHHHHHHH---cCCCEEEECcccccCcC
Confidence 32110 1123467999999999999887765 36888889998776654
|
|
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.49 E-value=4.3e-13 Score=125.83 Aligned_cols=167 Identities=16% Similarity=0.110 Sum_probs=116.2
Q ss_pred CceEEEecCCCchhHHHHHHHHhC-CCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGL-GNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~-g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
+|++|||||+|.||++++++|+++ | +.|+.++|+....... . ...++.++.+|++|....++.+
T Consensus 315 ~~~VLVTGatGFIGs~Lv~~Ll~~~g----~~V~~l~r~~~~~~~~---~-~~~~~~~~~gDl~d~~~~l~~~------- 379 (660)
T PRK08125 315 RTRVLILGVNGFIGNHLTERLLRDDN----YEVYGLDIGSDAISRF---L-GHPRFHFVEGDISIHSEWIEYH------- 379 (660)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCC----cEEEEEeCCchhhhhh---c-CCCceEEEeccccCcHHHHHHH-------
Confidence 468999999999999999999985 6 8999999976542221 1 1346788899999865412222
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
+. ++|+|||+|+...+ ... .+.-+..+++|+.++.++++++... + .++|++||...+
T Consensus 380 l~--~~D~ViHlAa~~~~-~~~----~~~~~~~~~~Nv~~t~~ll~a~~~~---------------~-~~~V~~SS~~vy 436 (660)
T PRK08125 380 IK--KCDVVLPLVAIATP-IEY----TRNPLRVFELDFEENLKIIRYCVKY---------------N-KRIIFPSTSEVY 436 (660)
T ss_pred hc--CCCEEEECccccCc-hhh----ccCHHHHHHhhHHHHHHHHHHHHhc---------------C-CeEEEEcchhhc
Confidence 11 39999999997653 111 1223446778999999888886542 2 479999996533
Q ss_pred cccc--C----C---------CCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCC
Q psy11190 160 IEDN--T----Q---------GGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208 (248)
Q Consensus 160 ~~~~--~----~---------~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~ 208 (248)
-... + . .+...|+.+|.+.+.+++.++.. +++++..+.|+.+..|.
T Consensus 437 g~~~~~~~~E~~~~~~~~p~~~p~s~Yg~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~ 497 (660)
T PRK08125 437 GMCTDKYFDEDTSNLIVGPINKQRWIYSVSKQLLDRVIWAYGEK---EGLRFTLFRPFNWMGPR 497 (660)
T ss_pred CCCCCCCcCccccccccCCCCCCccchHHHHHHHHHHHHHHHHh---cCCceEEEEEceeeCCC
Confidence 2100 0 0 12236999999999999888755 36888888888887663
|
|
| >KOG1371|consensus | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.1e-12 Score=109.28 Aligned_cols=156 Identities=19% Similarity=0.203 Sum_probs=117.4
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchh----HHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDK----AVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDIS 77 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~----~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~ 77 (248)
+++|||||+|-||.+++.+|+++| +.|++++.-... +...+++......+.+.+.|++|.+. ++++|+...
T Consensus 3 ~~VLVtGgaGyiGsht~l~L~~~g----y~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~-L~kvF~~~~ 77 (343)
T KOG1371|consen 3 KHVLVTGGAGYIGSHTVLALLKRG----YGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEA-LEKLFSEVK 77 (343)
T ss_pred cEEEEecCCcceehHHHHHHHhCC----CcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHH-HHHHHhhcC
Confidence 589999999999999999999999 899998764433 33334444445789999999999888 666655444
Q ss_pred hhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCC
Q psy11190 78 DVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIM 157 (248)
Q Consensus 78 ~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~ 157 (248)
+|.|+|-|+.... ..+.+.-.+.++.|..|+++++..+... +-..+|+.||..
T Consensus 78 -------fd~V~Hfa~~~~v-----geS~~~p~~Y~~nNi~gtlnlLe~~~~~---------------~~~~~V~sssat 130 (343)
T KOG1371|consen 78 -------FDAVMHFAALAAV-----GESMENPLSYYHNNIAGTLNLLEVMKAH---------------NVKALVFSSSAT 130 (343)
T ss_pred -------CceEEeehhhhcc-----chhhhCchhheehhhhhHHHHHHHHHHc---------------CCceEEEeccee
Confidence 9999999987654 2355556889999999999988876665 334567766654
Q ss_pred Ccccc---------cCCC-CCccchhhHHHHHHHHHHHHhhcc
Q psy11190 158 GSIED---------NTQG-GFHPYRCSKAALNAATRSLSIDLK 190 (248)
Q Consensus 158 ~~~~~---------~~~~-~~~~y~~sK~a~~~~~~~la~e~~ 190 (248)
.++. .+.. +...|+.+|.+++.+...+...+.
T Consensus 131 -vYG~p~~ip~te~~~t~~p~~pyg~tK~~iE~i~~d~~~~~~ 172 (343)
T KOG1371|consen 131 -VYGLPTKVPITEEDPTDQPTNPYGKTKKAIEEIIHDYNKAYG 172 (343)
T ss_pred -eecCcceeeccCcCCCCCCCCcchhhhHHHHHHHHhhhcccc
Confidence 3433 1112 567899999999999998887664
|
|
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=5.8e-13 Score=113.73 Aligned_cols=162 Identities=14% Similarity=0.138 Sum_probs=105.5
Q ss_pred EEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhh--hhc
Q psy11190 4 ILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISD--VVK 81 (248)
Q Consensus 4 ~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~--~~~ 81 (248)
+|||||+|.||++++++|+++| +.++++.|+........ .+..+|+.|..+ ...+++.+.+ .++
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g----~~~v~~~~~~~~~~~~~---------~~~~~~~~d~~~-~~~~~~~~~~~~~~~ 67 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKG----ITDILVVDNLKDGTKFV---------NLVDLDIADYMD-KEDFLAQIMAGDDFG 67 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCC----CceEEEecCCCcchHHH---------hhhhhhhhhhhh-HHHHHHHHhcccccC
Confidence 7999999999999999999999 76666655543321111 123456766555 4444444432 122
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+|||+|+.... . ..+. +..++.|+.++.++++.+... +.++|++||...+..
T Consensus 68 --~~d~Vih~A~~~~~-~---~~~~---~~~~~~n~~~t~~ll~~~~~~----------------~~~~i~~SS~~vyg~ 122 (308)
T PRK11150 68 --DIEAIFHEGACSST-T---EWDG---KYMMDNNYQYSKELLHYCLER----------------EIPFLYASSAATYGG 122 (308)
T ss_pred --CccEEEECceecCC-c---CCCh---HHHHHHHHHHHHHHHHHHHHc----------------CCcEEEEcchHHhCc
Confidence 49999999986432 1 1112 335778888888887776432 236999998754321
Q ss_pred cc--------CCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecC
Q psy11190 162 DN--------TQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTD 207 (248)
Q Consensus 162 ~~--------~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~ 207 (248)
.. +..+...|+.+|.+.+.+++.++.+ .++++..+.|+.+..|
T Consensus 123 ~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~vyG~ 173 (308)
T PRK11150 123 RTDDFIEEREYEKPLNVYGYSKFLFDEYVRQILPE---ANSQICGFRYFNVYGP 173 (308)
T ss_pred CCCCCCccCCCCCCCCHHHHHHHHHHHHHHHHHHH---cCCCEEEEeeeeecCC
Confidence 10 1123467999999999998887654 3677888888766554
|
|
| >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.47 E-value=6.6e-13 Score=113.23 Aligned_cols=166 Identities=22% Similarity=0.209 Sum_probs=118.6
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhcC
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVKD 82 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~~ 82 (248)
.+|||||+|.||.+++++|+++| +.|+.++|......... ..+.++.+|+++.+. ... ...
T Consensus 2 ~ILVtG~tGfiG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~------~~~~~~~~d~~~~~~-~~~-------~~~- 62 (314)
T COG0451 2 RILVTGGAGFIGSHLVERLLAAG----HDVRGLDRLRDGLDPLL------SGVEFVVLDLTDRDL-VDE-------LAK- 62 (314)
T ss_pred eEEEEcCcccHHHHHHHHHHhCC----CeEEEEeCCCccccccc------cccceeeecccchHH-HHH-------HHh-
Confidence 39999999999999999999999 99999999876544322 466788899988744 222 111
Q ss_pred CCc-cEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 83 QGL-NVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 83 ~~i-D~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
.. |.+||+|+...... .. .. .....+.+|+.++.++++++... +..++|+.||.....+
T Consensus 63 -~~~d~vih~aa~~~~~~--~~-~~-~~~~~~~~nv~gt~~ll~aa~~~---------------~~~~~v~~ss~~~~~~ 122 (314)
T COG0451 63 -GVPDAVIHLAAQSSVPD--SN-AS-DPAEFLDVNVDGTLNLLEAARAA---------------GVKRFVFASSVSVVYG 122 (314)
T ss_pred -cCCCEEEEccccCchhh--hh-hh-CHHHHHHHHHHHHHHHHHHHHHc---------------CCCeEEEeCCCceECC
Confidence 24 99999999765311 11 11 34457778999999999888771 4677888666443332
Q ss_pred c-c---------CCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCC
Q psy11190 162 D-N---------TQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGG 210 (248)
Q Consensus 162 ~-~---------~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~ 210 (248)
. . +..+...|+.+|.+.+.+++..+. .+++.+..+.|+.+.-|...
T Consensus 123 ~~~~~~~~E~~~~~~p~~~Yg~sK~~~E~~~~~~~~---~~~~~~~ilR~~~vyGp~~~ 178 (314)
T COG0451 123 DPPPLPIDEDLGPPRPLNPYGVSKLAAEQLLRAYAR---LYGLPVVILRPFNVYGPGDK 178 (314)
T ss_pred CCCCCCcccccCCCCCCCHHHHHHHHHHHHHHHHHH---HhCCCeEEEeeeeeeCCCCC
Confidence 1 0 011112499999999999999887 46789999999888766543
|
|
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=99.44 E-value=8e-13 Score=111.60 Aligned_cols=168 Identities=25% Similarity=0.283 Sum_probs=116.3
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhcC
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVKD 82 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~~ 82 (248)
++|||||+|.||++++++|+++| +.|++++|+ .+|+.+.+. +..+++.+
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g----~~v~~~~r~--------------------~~d~~~~~~-~~~~~~~~------ 49 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEG----RVVVALTSS--------------------QLDLTDPEA-LERLLRAI------ 49 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcC----CEEEEeCCc--------------------ccCCCCHHH-HHHHHHhC------
Confidence 37999999999999999999999 899999885 478888777 66554432
Q ss_pred CCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcccc
Q psy11190 83 QGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIED 162 (248)
Q Consensus 83 ~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~~ 162 (248)
++|+|||+|+.... . ...+..+..+++|+.++.++++.+... +.++|++||.+.+.+.
T Consensus 50 -~~d~vi~~a~~~~~-~----~~~~~~~~~~~~n~~~~~~l~~~~~~~----------------~~~~v~~Ss~~vy~~~ 107 (287)
T TIGR01214 50 -RPDAVVNTAAYTDV-D----GAESDPEKAFAVNALAPQNLARAAARH----------------GARLVHISTDYVFDGE 107 (287)
T ss_pred -CCCEEEECCccccc-c----ccccCHHHHHHHHHHHHHHHHHHHHHc----------------CCeEEEEeeeeeecCC
Confidence 38999999986532 1 112234556678998888888875431 2479999986533211
Q ss_pred c--------CCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCC-C----------------------
Q psy11190 163 N--------TQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGG-S---------------------- 211 (248)
Q Consensus 163 ~--------~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~-~---------------------- 211 (248)
. +..+...|+.+|.+.+.+++.+ +.++..+.|+.+..+... .
T Consensus 108 ~~~~~~E~~~~~~~~~Y~~~K~~~E~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (287)
T TIGR01214 108 GKRPYREDDATNPLNVYGQSKLAGEQAIRAA-------GPNALIVRTSWLYGGGGGRNFVRTMLRLAGRGEELRVVDDQI 180 (287)
T ss_pred CCCCCCCCCCCCCcchhhHHHHHHHHHHHHh-------CCCeEEEEeeecccCCCCCCHHHHHHHHhhcCCCceEecCCC
Confidence 0 1123457999999999888765 246778888877655321 0
Q ss_pred CCCCchhhHHHHHHHHhhh
Q psy11190 212 NAPLEVGAATAGIIQFIQS 230 (248)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~ 230 (248)
......+++++.++..+..
T Consensus 181 ~~~v~v~Dva~a~~~~~~~ 199 (287)
T TIGR01214 181 GSPTYAKDLARVIAALLQR 199 (287)
T ss_pred cCCcCHHHHHHHHHHHHhh
Confidence 0023367888888887765
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=99.43 E-value=2e-12 Score=115.62 Aligned_cols=162 Identities=12% Similarity=0.034 Sum_probs=108.0
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHH-HHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAV-ELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|++|||||+|.||++++++|+++| +.|+++++...... ...... ...++.++..|+.+.. +.
T Consensus 120 ~kILVTGatGfIGs~Lv~~Ll~~G----~~V~~ld~~~~~~~~~~~~~~-~~~~~~~i~~D~~~~~---------l~--- 182 (442)
T PLN02206 120 LRVVVTGGAGFVGSHLVDRLMARG----DSVIVVDNFFTGRKENVMHHF-SNPNFELIRHDVVEPI---------LL--- 182 (442)
T ss_pred CEEEEECcccHHHHHHHHHHHHCc----CEEEEEeCCCccchhhhhhhc-cCCceEEEECCccChh---------hc---
Confidence 469999999999999999999999 89999887533211 111111 1235667777775432 11
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
++|+|||+|+...+ ... .++....+++|+.++.++++++... + .++|++||...+.
T Consensus 183 ---~~D~ViHlAa~~~~-~~~----~~~p~~~~~~Nv~gt~nLleaa~~~---------------g-~r~V~~SS~~VYg 238 (442)
T PLN02206 183 ---EVDQIYHLACPASP-VHY----KFNPVKTIKTNVVGTLNMLGLAKRV---------------G-ARFLLTSTSEVYG 238 (442)
T ss_pred ---CCCEEEEeeeecch-hhh----hcCHHHHHHHHHHHHHHHHHHHHHh---------------C-CEEEEECChHHhC
Confidence 38999999987543 111 1223566788999999998876542 2 3799999976432
Q ss_pred ccc-------------CCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecC
Q psy11190 161 EDN-------------TQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTD 207 (248)
Q Consensus 161 ~~~-------------~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~ 207 (248)
... +..+...|+.+|.+.+.+++.+.+. .++++..+.|+.+..|
T Consensus 239 ~~~~~p~~E~~~~~~~P~~~~s~Y~~SK~~aE~~~~~y~~~---~g~~~~ilR~~~vyGp 295 (442)
T PLN02206 239 DPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG---ANVEVRIARIFNTYGP 295 (442)
T ss_pred CCCCCCCCccccccCCCCCccchHHHHHHHHHHHHHHHHHH---hCCCeEEEEeccccCC
Confidence 110 1112357999999999988877654 3577777766655444
|
|
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=8.9e-12 Score=107.01 Aligned_cols=184 Identities=14% Similarity=0.117 Sum_probs=120.7
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhcC
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVKD 82 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~~ 82 (248)
+++||||||.||++++++|+++| +.|++++|+.++...+. ...+.++.+|++|.++ +..++ .
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g----~~V~~l~R~~~~~~~l~-----~~~v~~v~~Dl~d~~~-l~~al-------~- 63 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEG----YQVRCLVRNLRKASFLK-----EWGAELVYGDLSLPET-LPPSF-------K- 63 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCC----CeEEEEEcChHHhhhHh-----hcCCEEEECCCCCHHH-HHHHH-------C-
Confidence 69999999999999999999999 99999999875533221 2368899999999877 44332 2
Q ss_pred CCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcccc
Q psy11190 83 QGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIED 162 (248)
Q Consensus 83 ~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~~ 162 (248)
++|+|||+++... .+.....++|+.++.++++++... +-.++|++||..+..
T Consensus 64 -g~d~Vi~~~~~~~----------~~~~~~~~~~~~~~~~l~~aa~~~---------------gvkr~I~~Ss~~~~~-- 115 (317)
T CHL00194 64 -GVTAIIDASTSRP----------SDLYNAKQIDWDGKLALIEAAKAA---------------KIKRFIFFSILNAEQ-- 115 (317)
T ss_pred -CCCEEEECCCCCC----------CCccchhhhhHHHHHHHHHHHHHc---------------CCCEEEEeccccccc--
Confidence 3899999875321 112234456777777776665432 345899998854321
Q ss_pred cCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCC--------C-----------CCCCchhhHHHH
Q psy11190 163 NTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGG--------S-----------NAPLEVGAATAG 223 (248)
Q Consensus 163 ~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~--------~-----------~~~~~~~~~~~~ 223 (248)
.+...|..+|...+.+.+ ..+++.+.+.|+.+..++.. . ......+++++.
T Consensus 116 ---~~~~~~~~~K~~~e~~l~-------~~~l~~tilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~ 185 (317)
T CHL00194 116 ---YPYIPLMKLKSDIEQKLK-------KSGIPYTIFRLAGFFQGLISQYAIPILEKQPIWITNESTPISYIDTQDAAKF 185 (317)
T ss_pred ---cCCChHHHHHHHHHHHHH-------HcCCCeEEEeecHHhhhhhhhhhhhhccCCceEecCCCCccCccCHHHHHHH
Confidence 123457888888776653 24677888888755332210 0 011345899999
Q ss_pred HHHHhhhcccccccceeeeCC
Q psy11190 224 IIQFIQSLGEAHNGGFFEYTG 244 (248)
Q Consensus 224 ~~~~~~~~~~~~~g~~~~~~g 244 (248)
++..+..+. ..+..|..-|
T Consensus 186 ~~~~l~~~~--~~~~~~ni~g 204 (317)
T CHL00194 186 CLKSLSLPE--TKNKTFPLVG 204 (317)
T ss_pred HHHHhcCcc--ccCcEEEecC
Confidence 988886532 2355555443
|
|
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.7e-12 Score=110.67 Aligned_cols=135 Identities=19% Similarity=0.126 Sum_probs=94.0
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhcC
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVKD 82 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~~ 82 (248)
++|||||+|.||++++++|+++| . |+.++|... .+..|++|.+. +.++++..
T Consensus 2 ~iLVtG~~GfiGs~l~~~L~~~g----~-V~~~~~~~~----------------~~~~Dl~d~~~-~~~~~~~~------ 53 (299)
T PRK09987 2 NILLFGKTGQVGWELQRALAPLG----N-LIALDVHST----------------DYCGDFSNPEG-VAETVRKI------ 53 (299)
T ss_pred eEEEECCCCHHHHHHHHHhhccC----C-EEEeccccc----------------cccCCCCCHHH-HHHHHHhc------
Confidence 59999999999999999999877 3 777777521 24579998877 66554432
Q ss_pred CCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcccc
Q psy11190 83 QGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIED 162 (248)
Q Consensus 83 ~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~~ 162 (248)
++|+|||+|+.... . ...++-+..+.+|+.++.++++.+... +.++|++||...+-+.
T Consensus 54 -~~D~Vih~Aa~~~~-~----~~~~~~~~~~~~N~~~~~~l~~aa~~~----------------g~~~v~~Ss~~Vy~~~ 111 (299)
T PRK09987 54 -RPDVIVNAAAHTAV-D----KAESEPEFAQLLNATSVEAIAKAANEV----------------GAWVVHYSTDYVFPGT 111 (299)
T ss_pred -CCCEEEECCccCCc-c----hhhcCHHHHHHHHHHHHHHHHHHHHHc----------------CCeEEEEccceEECCC
Confidence 38999999997643 1 112223455667999988888876542 2478999886533111
Q ss_pred --------cCCCCCccchhhHHHHHHHHHHHHh
Q psy11190 163 --------NTQGGFHPYRCSKAALNAATRSLSI 187 (248)
Q Consensus 163 --------~~~~~~~~y~~sK~a~~~~~~~la~ 187 (248)
.+..+...|+.+|.+.+.+++....
T Consensus 112 ~~~p~~E~~~~~P~~~Yg~sK~~~E~~~~~~~~ 144 (299)
T PRK09987 112 GDIPWQETDATAPLNVYGETKLAGEKALQEHCA 144 (299)
T ss_pred CCCCcCCCCCCCCCCHHHHHHHHHHHHHHHhCC
Confidence 1112445799999999998876543
|
|
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=99.41 E-value=9.7e-12 Score=98.08 Aligned_cols=165 Identities=22% Similarity=0.274 Sum_probs=117.1
Q ss_pred EEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhcCC
Q psy11190 4 ILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVKDQ 83 (248)
Q Consensus 4 ~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~~~ 83 (248)
++|+||||.+|+.++++|+++| ++|+++.|++++.++ ..++.++++|+.|.++ +... +.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~----~~V~~~~R~~~~~~~-------~~~~~~~~~d~~d~~~-~~~a-------l~-- 59 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRG----HEVTALVRSPSKAED-------SPGVEIIQGDLFDPDS-VKAA-------LK-- 59 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTT----SEEEEEESSGGGHHH-------CTTEEEEESCTTCHHH-HHHH-------HT--
T ss_pred eEEECCCChHHHHHHHHHHHCC----CEEEEEecCchhccc-------ccccccceeeehhhhh-hhhh-------hh--
Confidence 6899999999999999999999 999999999987665 6789999999999876 4433 22
Q ss_pred CccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccccc
Q psy11190 84 GLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDN 163 (248)
Q Consensus 84 ~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~~~ 163 (248)
++|.+|+++|.... + ...++.++..+++. +..+++++|+........
T Consensus 60 ~~d~vi~~~~~~~~----------~------------~~~~~~~~~a~~~~-----------~~~~~v~~s~~~~~~~~~ 106 (183)
T PF13460_consen 60 GADAVIHAAGPPPK----------D------------VDAAKNIIEAAKKA-----------GVKRVVYLSSAGVYRDPP 106 (183)
T ss_dssp TSSEEEECCHSTTT----------H------------HHHHHHHHHHHHHT-----------TSSEEEEEEETTGTTTCT
T ss_pred hcchhhhhhhhhcc----------c------------cccccccccccccc-----------ccccceeeeccccCCCCC
Confidence 39999999975321 0 45566777777665 456899999877554331
Q ss_pred CC------CCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC-----------CCCchhhHHHHHHH
Q psy11190 164 TQ------GGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN-----------APLEVGAATAGIIQ 226 (248)
Q Consensus 164 ~~------~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~-----------~~~~~~~~~~~~~~ 226 (248)
.. +.+..|...|...+.+. . ..+++...+.|+++..+..... ...+.+++++.++.
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~e~~~---~----~~~~~~~ivrp~~~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~~~~ 179 (183)
T PF13460_consen 107 GLFSDEDKPIFPEYARDKREAEEAL---R----ESGLNWTIVRPGWIYGNPSRSYRLIKEGGPQGVNFISREDVAKAIVE 179 (183)
T ss_dssp SEEEGGTCGGGHHHHHHHHHHHHHH---H----HSTSEEEEEEESEEEBTTSSSEEEESSTSTTSHCEEEHHHHHHHHHH
T ss_pred cccccccccchhhhHHHHHHHHHHH---H----hcCCCEEEEECcEeEeCCCcceeEEeccCCCCcCcCCHHHHHHHHHH
Confidence 10 01123555554444333 1 3489999999999988763321 13567888888877
Q ss_pred Hhh
Q psy11190 227 FIQ 229 (248)
Q Consensus 227 ~~~ 229 (248)
.+.
T Consensus 180 ~l~ 182 (183)
T PF13460_consen 180 ALE 182 (183)
T ss_dssp HHH
T ss_pred HhC
Confidence 664
|
... |
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.41 E-value=3.7e-12 Score=113.78 Aligned_cols=162 Identities=14% Similarity=0.066 Sum_probs=108.3
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhH-HHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKA-VELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
++++||||+|.||++++++|+++| +.|++++|..... ....... ...++.++..|+.+.. +.
T Consensus 121 mkILVTGatGFIGs~Lv~~Ll~~G----~~V~~ldr~~~~~~~~~~~~~-~~~~~~~~~~Di~~~~---------~~--- 183 (436)
T PLN02166 121 LRIVVTGGAGFVGSHLVDKLIGRG----DEVIVIDNFFTGRKENLVHLF-GNPRFELIRHDVVEPI---------LL--- 183 (436)
T ss_pred CEEEEECCccHHHHHHHHHHHHCC----CEEEEEeCCCCccHhHhhhhc-cCCceEEEECcccccc---------cc---
Confidence 369999999999999999999999 8999999864321 1122111 1235667777775431 11
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
++|+|||+|+...+ ... . ++-...++.|+.++.+++..+... + .++|++||.+.+.
T Consensus 184 ---~~D~ViHlAa~~~~-~~~-~---~~p~~~~~~Nv~gT~nLleaa~~~---------------g-~r~V~~SS~~VYg 239 (436)
T PLN02166 184 ---EVDQIYHLACPASP-VHY-K---YNPVKTIKTNVMGTLNMLGLAKRV---------------G-ARFLLTSTSEVYG 239 (436)
T ss_pred ---CCCEEEECceeccc-hhh-c---cCHHHHHHHHHHHHHHHHHHHHHh---------------C-CEEEEECcHHHhC
Confidence 39999999987543 111 1 123466778999999988776543 2 3799998875332
Q ss_pred cc-------------cCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecC
Q psy11190 161 ED-------------NTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTD 207 (248)
Q Consensus 161 ~~-------------~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~ 207 (248)
.. .+..+...|+.+|.+.+.+++..++. .++++..+.|+.+..|
T Consensus 240 ~~~~~p~~E~~~~~~~p~~p~s~Yg~SK~~aE~~~~~y~~~---~~l~~~ilR~~~vYGp 296 (436)
T PLN02166 240 DPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLAMDYHRG---AGVEVRIARIFNTYGP 296 (436)
T ss_pred CCCCCCCCccccccCCCCCCCCchHHHHHHHHHHHHHHHHH---hCCCeEEEEEccccCC
Confidence 11 01122456999999999999887654 3577777777666554
|
|
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=99.40 E-value=4.1e-12 Score=105.45 Aligned_cols=167 Identities=19% Similarity=0.202 Sum_probs=99.3
Q ss_pred EecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHH--------------hhcCCceeEEeeccCCchh-hh
Q psy11190 6 ITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALA--------------QQHSNLHVIELDVTDFSKQ-QD 70 (248)
Q Consensus 6 VtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~--------------~~~~~~~~~~~D~~~~~~~-v~ 70 (248)
||||||.+|.++.++|++++. ..+|+++.|..+.......+. ....++.++.+|++++.-= -.
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~--~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~ 78 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPP--DVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSD 78 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS---TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--H
T ss_pred CcCCCcHHHHHHHHHHHcCCC--CcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCCh
Confidence 799999999999999999982 129999999875422222221 1256899999999986410 11
Q ss_pred hHHHHhhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceE
Q psy11190 71 VLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAI 150 (248)
Q Consensus 71 ~~~~~i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~i 150 (248)
..++.+.+ .+|+|||+|+...... ..+...++|+.|+.++++.+... ...++
T Consensus 79 ~~~~~L~~-----~v~~IiH~Aa~v~~~~--------~~~~~~~~NV~gt~~ll~la~~~---------------~~~~~ 130 (249)
T PF07993_consen 79 EDYQELAE-----EVDVIIHCAASVNFNA--------PYSELRAVNVDGTRNLLRLAAQG---------------KRKRF 130 (249)
T ss_dssp HHHHHHHH-----H--EEEE--SS-SBS---------S--EEHHHHHHHHHHHHHHHTSS---------------S---E
T ss_pred HHhhcccc-----ccceeeecchhhhhcc--------cchhhhhhHHHHHHHHHHHHHhc---------------cCcce
Confidence 22333332 3999999998765411 34446678999999998887631 23389
Q ss_pred EEeecCCCcccccC------------------CCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceec
Q psy11190 151 VNVSSIMGSIEDNT------------------QGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKT 206 (248)
Q Consensus 151 v~vss~~~~~~~~~------------------~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t 206 (248)
+++||.. ..+... ......|..||...+.+.+..+.+ .|+.+..+.||.+-.
T Consensus 131 ~~iSTa~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~---~g~p~~I~Rp~~i~g 200 (249)
T PF07993_consen 131 HYISTAY-VAGSRPGTIEEKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQR---HGLPVTIYRPGIIVG 200 (249)
T ss_dssp EEEEEGG-GTTS-TTT--SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHH---H---EEEEEE-EEE-
T ss_pred EEecccc-ccCCCCCcccccccccccccchhhccCCccHHHHHHHHHHHHHHHHhc---CCceEEEEecCcccc
Confidence 9999932 211110 112247999999999999887755 478999999999966
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=99.40 E-value=4.6e-12 Score=111.12 Aligned_cols=166 Identities=14% Similarity=-0.001 Sum_probs=112.6
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|+++||||+|.||+++++.|.++| +.|+.++|...... .. ......++.+|+++.+. +..++ .
T Consensus 22 ~~IlVtGgtGfIG~~l~~~L~~~G----~~V~~v~r~~~~~~--~~---~~~~~~~~~~Dl~d~~~-~~~~~-------~ 84 (370)
T PLN02695 22 LRICITGAGGFIASHIARRLKAEG----HYIIASDWKKNEHM--SE---DMFCHEFHLVDLRVMEN-CLKVT-------K 84 (370)
T ss_pred CEEEEECCccHHHHHHHHHHHhCC----CEEEEEEecccccc--cc---ccccceEEECCCCCHHH-HHHHH-------h
Confidence 579999999999999999999999 99999998643211 00 01124677889988665 33332 1
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+|||.|+.... ..+.. ++....+..|+.++.++++++... +-.++|++||...+-.
T Consensus 85 --~~D~Vih~Aa~~~~-~~~~~---~~~~~~~~~N~~~t~nll~aa~~~---------------~vk~~V~~SS~~vYg~ 143 (370)
T PLN02695 85 --GVDHVFNLAADMGG-MGFIQ---SNHSVIMYNNTMISFNMLEAARIN---------------GVKRFFYASSACIYPE 143 (370)
T ss_pred --CCCEEEEcccccCC-ccccc---cCchhhHHHHHHHHHHHHHHHHHh---------------CCCEEEEeCchhhcCC
Confidence 38999999986532 11111 122334566888888888775432 3458999998643211
Q ss_pred ---------c---c--CCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCC
Q psy11190 162 ---------D---N--TQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208 (248)
Q Consensus 162 ---------~---~--~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~ 208 (248)
. . +..+...|+.+|.+.+.+++.++.. .++++..+.|+.+..|-
T Consensus 144 ~~~~~~~~~~~E~~~~p~~p~s~Yg~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~ 201 (370)
T PLN02695 144 FKQLETNVSLKESDAWPAEPQDAYGLEKLATEELCKHYTKD---FGIECRIGRFHNIYGPF 201 (370)
T ss_pred ccccCcCCCcCcccCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCCEEEEEECCccCCC
Confidence 0 0 1234558999999999999887654 47888888888777763
|
|
| >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.40 E-value=9.7e-12 Score=103.30 Aligned_cols=169 Identities=25% Similarity=0.292 Sum_probs=124.8
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|| +||||++|-+|.++++.|. .+ ..|+.++|.. +|++|.+. +.+++++.+
T Consensus 1 M~-iLi~G~~GqLG~~L~~~l~-~~----~~v~a~~~~~--------------------~Ditd~~~-v~~~i~~~~--- 50 (281)
T COG1091 1 MK-ILITGANGQLGTELRRALP-GE----FEVIATDRAE--------------------LDITDPDA-VLEVIRETR--- 50 (281)
T ss_pred Cc-EEEEcCCChHHHHHHHHhC-CC----ceEEeccCcc--------------------ccccChHH-HHHHHHhhC---
Confidence 77 9999999999999999998 55 7888888753 89999998 777766554
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+|+|||+|++... +....+-+..|.+|..++.++.+++-.. +.++|.+|+-.-+-
T Consensus 51 ----PDvVIn~AAyt~v-----D~aE~~~e~A~~vNa~~~~~lA~aa~~~----------------ga~lVhiSTDyVFD 105 (281)
T COG1091 51 ----PDVVINAAAYTAV-----DKAESEPELAFAVNATGAENLARAAAEV----------------GARLVHISTDYVFD 105 (281)
T ss_pred ----CCEEEECcccccc-----ccccCCHHHHHHhHHHHHHHHHHHHHHh----------------CCeEEEeecceEec
Confidence 9999999998654 2233456788899999999999987664 67899999877554
Q ss_pred ccc--------CCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC---------------------
Q psy11190 161 EDN--------TQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS--------------------- 211 (248)
Q Consensus 161 ~~~--------~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~--------------------- 211 (248)
+.. ...+...|+.||.+-+..++... ++ ...+..+|+...-.++
T Consensus 106 G~~~~~Y~E~D~~~P~nvYG~sKl~GE~~v~~~~----~~---~~I~Rtswv~g~~g~nFv~tml~la~~~~~l~vv~Dq 178 (281)
T COG1091 106 GEKGGPYKETDTPNPLNVYGRSKLAGEEAVRAAG----PR---HLILRTSWVYGEYGNNFVKTMLRLAKEGKELKVVDDQ 178 (281)
T ss_pred CCCCCCCCCCCCCCChhhhhHHHHHHHHHHHHhC----CC---EEEEEeeeeecCCCCCHHHHHHHHhhcCCceEEECCe
Confidence 442 12356789999999999887775 22 2223333333221111
Q ss_pred -CCCCchhhHHHHHHHHhhhc
Q psy11190 212 -NAPLEVGAATAGIIQFIQSL 231 (248)
Q Consensus 212 -~~~~~~~~~~~~~~~~~~~~ 231 (248)
..|....++++.+..++...
T Consensus 179 ~gsPt~~~dlA~~i~~ll~~~ 199 (281)
T COG1091 179 YGSPTYTEDLADAILELLEKE 199 (281)
T ss_pred eeCCccHHHHHHHHHHHHhcc
Confidence 11678899999999988764
|
|
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=99.40 E-value=3.5e-12 Score=108.94 Aligned_cols=164 Identities=16% Similarity=0.064 Sum_probs=105.0
Q ss_pred EEEecCCCchhHHHHHHHHhCCCCCCc-eEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhcC
Q psy11190 4 ILITGCNRGLGLGMIKVLVGLGNNQPA-HIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVKD 82 (248)
Q Consensus 4 ~lVtGas~giG~~ia~~l~~~g~~~~~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~~ 82 (248)
+|||||+|.||.+++++|.++| + .|++++|.... ..+.++. ...+..|+++.+. .+.+.+. .+.
T Consensus 1 ilItGatG~iG~~l~~~L~~~g----~~~v~~~~~~~~~-~~~~~~~-----~~~~~~d~~~~~~-~~~~~~~---~~~- 65 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERG----ITDILVVDNLRDG-HKFLNLA-----DLVIADYIDKEDF-LDRLEKG---AFG- 65 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcC----CceEEEEecCCCc-hhhhhhh-----heeeeccCcchhH-HHHHHhh---ccC-
Confidence 5899999999999999999999 6 68888765432 1121111 1245567776554 4443332 122
Q ss_pred CCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcccc
Q psy11190 83 QGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIED 162 (248)
Q Consensus 83 ~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~~ 162 (248)
++|+|||+|+.... +.++.+..+++|+.++.++++.+... +.++|++||...+...
T Consensus 66 -~~D~vvh~A~~~~~-------~~~~~~~~~~~n~~~~~~ll~~~~~~----------------~~~~v~~SS~~vy~~~ 121 (314)
T TIGR02197 66 -KIEAIFHQGACSDT-------TETDGEYMMENNYQYSKRLLDWCAEK----------------GIPFIYASSAATYGDG 121 (314)
T ss_pred -CCCEEEECccccCc-------cccchHHHHHHHHHHHHHHHHHHHHh----------------CCcEEEEccHHhcCCC
Confidence 49999999986422 22345667788998888888876542 2479999996533211
Q ss_pred -------c-CCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecC
Q psy11190 163 -------N-TQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTD 207 (248)
Q Consensus 163 -------~-~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~ 207 (248)
. +..+...|+.+|...+.+++....+. ..++++..+.|+.+..+
T Consensus 122 ~~~~~e~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~-~~~~~~~~lR~~~vyG~ 173 (314)
T TIGR02197 122 EAGFREGRELERPLNVYGYSKFLFDQYVRRRVLPE-ALSAQVVGLRYFNVYGP 173 (314)
T ss_pred CCCcccccCcCCCCCHHHHHHHHHHHHHHHHhHhh-ccCCceEEEEEeeccCC
Confidence 0 01245679999999999987643221 12456666666655444
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Probab=99.38 E-value=3.1e-12 Score=108.88 Aligned_cols=151 Identities=13% Similarity=0.034 Sum_probs=102.8
Q ss_pred EEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhcCCC
Q psy11190 5 LITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVKDQG 84 (248)
Q Consensus 5 lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~~~~ 84 (248)
|||||+|.||.++++.|+++| ..|+++.+. ..+|+++.++ +..+++.. +
T Consensus 1 lItGa~GfiG~~l~~~L~~~g----~~v~~~~~~-------------------~~~Dl~~~~~-l~~~~~~~-------~ 49 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALG----FTNLVLRTH-------------------KELDLTRQAD-VEAFFAKE-------K 49 (306)
T ss_pred CcccCCCcccHHHHHHHHhCC----CcEEEeecc-------------------ccCCCCCHHH-HHHHHhcc-------C
Confidence 699999999999999999999 777765432 1489988777 55554431 3
Q ss_pred ccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccccc-
Q psy11190 85 LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDN- 163 (248)
Q Consensus 85 iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~~~- 163 (248)
+|+|||+|+.... ... ..+..+..++.|+.++.++++.+... +-.++|++||...+.+..
T Consensus 50 ~d~Vih~A~~~~~--~~~--~~~~~~~~~~~n~~~~~~ll~~~~~~---------------~~~~~i~~SS~~vyg~~~~ 110 (306)
T PLN02725 50 PTYVILAAAKVGG--IHA--NMTYPADFIRENLQIQTNVIDAAYRH---------------GVKKLLFLGSSCIYPKFAP 110 (306)
T ss_pred CCEEEEeeeeecc--cch--hhhCcHHHHHHHhHHHHHHHHHHHHc---------------CCCeEEEeCceeecCCCCC
Confidence 8999999987431 111 11122345667888888887776543 345799999865322110
Q ss_pred -----------CCCC-CccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCC
Q psy11190 164 -----------TQGG-FHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208 (248)
Q Consensus 164 -----------~~~~-~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~ 208 (248)
+..+ ...|+.+|.+.+.+++.+..+ .++++..+.|+.+..+.
T Consensus 111 ~~~~E~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~R~~~vyG~~ 164 (306)
T PLN02725 111 QPIPETALLTGPPEPTNEWYAIAKIAGIKMCQAYRIQ---YGWDAISGMPTNLYGPH 164 (306)
T ss_pred CCCCHHHhccCCCCCCcchHHHHHHHHHHHHHHHHHH---hCCCEEEEEecceeCCC
Confidence 0111 224999999999888877655 36888999988776653
|
|
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=99.35 E-value=5.8e-12 Score=106.66 Aligned_cols=170 Identities=24% Similarity=0.274 Sum_probs=113.7
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhcC
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVKD 82 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~~ 82 (248)
++||||++|-||.++.+.|.++| +.|+...|+ .+|++|.+. +..+++...
T Consensus 2 riLI~GasG~lG~~l~~~l~~~~----~~v~~~~r~--------------------~~dl~d~~~-~~~~~~~~~----- 51 (286)
T PF04321_consen 2 RILITGASGFLGSALARALKERG----YEVIATSRS--------------------DLDLTDPEA-VAKLLEAFK----- 51 (286)
T ss_dssp EEEEETTTSHHHHHHHHHHTTTS----EEEEEESTT--------------------CS-TTSHHH-HHHHHHHH------
T ss_pred EEEEECCCCHHHHHHHHHHhhCC----CEEEEeCch--------------------hcCCCCHHH-HHHHHHHhC-----
Confidence 69999999999999999999988 899999776 688988777 666655444
Q ss_pred CCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcccc
Q psy11190 83 QGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIED 162 (248)
Q Consensus 83 ~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~~ 162 (248)
+|+|||+|+...+ +...++-+..+.+|+.++.++++.+.. .+.++|++||..-+-+.
T Consensus 52 --pd~Vin~aa~~~~-----~~ce~~p~~a~~iN~~~~~~la~~~~~----------------~~~~li~~STd~VFdG~ 108 (286)
T PF04321_consen 52 --PDVVINCAAYTNV-----DACEKNPEEAYAINVDATKNLAEACKE----------------RGARLIHISTDYVFDGD 108 (286)
T ss_dssp ---SEEEE------H-----HHHHHSHHHHHHHHTHHHHHHHHHHHH----------------CT-EEEEEEEGGGS-SS
T ss_pred --CCeEeccceeecH-----HhhhhChhhhHHHhhHHHHHHHHHHHH----------------cCCcEEEeeccEEEcCC
Confidence 9999999998654 122344566778899999888888765 36789999997644332
Q ss_pred --------cCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC----------------------C
Q psy11190 163 --------NTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS----------------------N 212 (248)
Q Consensus 163 --------~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~----------------------~ 212 (248)
....+...|+.+|...+.+.+... + +...+.++++..+-.+. .
T Consensus 109 ~~~~y~E~d~~~P~~~YG~~K~~~E~~v~~~~----~---~~~IlR~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~d~~~ 181 (286)
T PF04321_consen 109 KGGPYTEDDPPNPLNVYGRSKLEGEQAVRAAC----P---NALILRTSWVYGPSGRNFLRWLLRRLRQGEPIKLFDDQYR 181 (286)
T ss_dssp TSSSB-TTS----SSHHHHHHHHHHHHHHHH-----S---SEEEEEE-SEESSSSSSHHHHHHHHHHCTSEEEEESSCEE
T ss_pred cccccccCCCCCCCCHHHHHHHHHHHHHHHhc----C---CEEEEecceecccCCCchhhhHHHHHhcCCeeEeeCCcee
Confidence 111245689999999999887733 2 45556666666552111 0
Q ss_pred CCCchhhHHHHHHHHhhhcc
Q psy11190 213 APLEVGAATAGIIQFIQSLG 232 (248)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~ 232 (248)
.+...+++++.++.++....
T Consensus 182 ~p~~~~dlA~~i~~l~~~~~ 201 (286)
T PF04321_consen 182 SPTYVDDLARVILELIEKNL 201 (286)
T ss_dssp --EEHHHHHHHHHHHHHHHH
T ss_pred CCEEHHHHHHHHHHHHHhcc
Confidence 15678899999999887643
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=6.2e-11 Score=111.34 Aligned_cols=165 Identities=20% Similarity=0.157 Sum_probs=111.0
Q ss_pred eEEEecCCCchhHHHHHHHH--hCCCCCCceEEEeecCchhHHHHHHHHhh--cCCceeEEeeccCCchh-hhhHHHHhh
Q psy11190 3 SILITGCNRGLGLGMIKVLV--GLGNNQPAHIFATCRNKDKAVELLALAQQ--HSNLHVIELDVTDFSKQ-QDVLFKDIS 77 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~--~~g~~~~~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~-v~~~~~~i~ 77 (248)
++|||||+|.||++++++|+ ++| ..|++++|+... ..+..+... ..++.++.+|++|.+.. ....++.+
T Consensus 2 ~ILVTGatGfIG~~lv~~Ll~~~~g----~~V~~l~R~~~~-~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l- 75 (657)
T PRK07201 2 RYFVTGGTGFIGRRLVSRLLDRRRE----ATVHVLVRRQSL-SRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL- 75 (657)
T ss_pred eEEEeCCccHHHHHHHHHHHhcCCC----CEEEEEECcchH-HHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh-
Confidence 69999999999999999999 467 899999996533 222222221 24788999999985420 11222222
Q ss_pred hhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCC
Q psy11190 78 DVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIM 157 (248)
Q Consensus 78 ~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~ 157 (248)
. ++|+|||+|+.... . .+ ....+.+|+.++.++++.+... +..+++++||..
T Consensus 76 ---~--~~D~Vih~Aa~~~~-~----~~---~~~~~~~nv~gt~~ll~~a~~~---------------~~~~~v~~SS~~ 127 (657)
T PRK07201 76 ---G--DIDHVVHLAAIYDL-T----AD---EEAQRAANVDGTRNVVELAERL---------------QAATFHHVSSIA 127 (657)
T ss_pred ---c--CCCEEEECceeecC-C----CC---HHHHHHHHhHHHHHHHHHHHhc---------------CCCeEEEEeccc
Confidence 2 49999999996532 1 12 2345567888888877765432 356899999876
Q ss_pred Cccccc----------CCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecC
Q psy11190 158 GSIEDN----------TQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTD 207 (248)
Q Consensus 158 ~~~~~~----------~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~ 207 (248)
...... +......|+.+|...+.+.+. ..++++..+.|+.+..+
T Consensus 128 v~g~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~------~~g~~~~ilRp~~v~G~ 181 (657)
T PRK07201 128 VAGDYEGVFREDDFDEGQGLPTPYHRTKFEAEKLVRE------ECGLPWRVYRPAVVVGD 181 (657)
T ss_pred cccCccCccccccchhhcCCCCchHHHHHHHHHHHHH------cCCCcEEEEcCCeeeec
Confidence 532110 011235699999999988753 24789999999988653
|
|
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.30 E-value=1e-10 Score=99.83 Aligned_cols=170 Identities=18% Similarity=0.266 Sum_probs=115.9
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHH---H--------hhcCCceeEEeeccCCchh-h
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLAL---A--------QQHSNLHVIELDVTDFSKQ-Q 69 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~---~--------~~~~~~~~~~~D~~~~~~~-v 69 (248)
+++++|||||.+|..+.++|+.+-. .+|++..|-++......++ . ....++.++..|++.+.-- -
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~---~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~ 77 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSD---AKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLS 77 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCC---CcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCC
Confidence 5799999999999999999997763 7999999976632222221 1 1235899999999854320 1
Q ss_pred hhHHHHhhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCce
Q psy11190 70 DVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAA 149 (248)
Q Consensus 70 ~~~~~~i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~ 149 (248)
+.-.+.+. . .+|.||||++.... -.+ ..+....|+.|+..+++.+.. ++++
T Consensus 78 ~~~~~~La---~--~vD~I~H~gA~Vn~-----v~p---Ys~L~~~NVlGT~evlrLa~~----------------gk~K 128 (382)
T COG3320 78 ERTWQELA---E--NVDLIIHNAALVNH-----VFP---YSELRGANVLGTAEVLRLAAT----------------GKPK 128 (382)
T ss_pred HHHHHHHh---h--hcceEEecchhhcc-----cCc---HHHhcCcchHhHHHHHHHHhc----------------CCCc
Confidence 12222222 2 49999999986542 112 344455799999888887654 3333
Q ss_pred -EEEeecCCCccccc-----------------CCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecC
Q psy11190 150 -IVNVSSIMGSIEDN-----------------TQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTD 207 (248)
Q Consensus 150 -iv~vss~~~~~~~~-----------------~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~ 207 (248)
+.+|||++..-... .+.....|+-||.+.+.+++.-. .+|.++..+.||.+-.+
T Consensus 129 p~~yVSsisv~~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~----~rGLpv~I~Rpg~I~gd 200 (382)
T COG3320 129 PLHYVSSISVGETEYYSNFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVREAG----DRGLPVTIFRPGYITGD 200 (382)
T ss_pred eeEEEeeeeeccccccCCCccccccccccccccCccCCCcchhHHHHHHHHHHHh----hcCCCeEEEecCeeecc
Confidence 89999887543221 11223579999999888887655 55899999999999443
|
|
| >KOG1430|consensus | Back alignment and domain information |
|---|
Probab=99.25 E-value=8.5e-10 Score=94.88 Aligned_cols=175 Identities=19% Similarity=0.143 Sum_probs=123.8
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHH-hhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALA-QQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|.+++||||+|.+|++++++|.+.+ ...+|.+++..+.......+.. ...+++..+++|+.+..+ + ...
T Consensus 4 ~~~vlVtGG~GflG~hlv~~L~~~~--~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~-i-------~~a 73 (361)
T KOG1430|consen 4 KLSVLVTGGSGFLGQHLVQALLENE--LKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANS-I-------SNA 73 (361)
T ss_pred CCEEEEECCccHHHHHHHHHHHhcc--cccEEEEeccCccccccchhhhcccCCceeEEecchhhhhh-h-------hhh
Confidence 4689999999999999999999999 3488999988764211111111 135678899999998776 3 333
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
+. ++ .+||+|....+ ..-..+-+..+++|+.|+.++...+... +-.++|++||..-.
T Consensus 74 ~~--~~-~Vvh~aa~~~~-----~~~~~~~~~~~~vNV~gT~nvi~~c~~~---------------~v~~lIYtSs~~Vv 130 (361)
T KOG1430|consen 74 FQ--GA-VVVHCAASPVP-----DFVENDRDLAMRVNVNGTLNVIEACKEL---------------GVKRLIYTSSAYVV 130 (361)
T ss_pred cc--Cc-eEEEeccccCc-----cccccchhhheeecchhHHHHHHHHHHh---------------CCCEEEEecCceEE
Confidence 32 36 66777654433 2223356788999999998888887776 56789999998755
Q ss_pred cccc---------CCCC--CccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC
Q psy11190 160 IEDN---------TQGG--FHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS 211 (248)
Q Consensus 160 ~~~~---------~~~~--~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~ 211 (248)
.+.. +++. ...|+.+|+-.+.+++..+. .......++.|-.+..|-.+.
T Consensus 131 f~g~~~~n~~E~~p~p~~~~d~Y~~sKa~aE~~Vl~an~---~~~l~T~aLR~~~IYGpgd~~ 190 (361)
T KOG1430|consen 131 FGGEPIINGDESLPYPLKHIDPYGESKALAEKLVLEANG---SDDLYTCALRPPGIYGPGDKR 190 (361)
T ss_pred eCCeecccCCCCCCCccccccccchHHHHHHHHHHHhcC---CCCeeEEEEccccccCCCCcc
Confidence 5431 1222 23799999999999887774 346888899998887775433
|
|
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.22 E-value=3.1e-10 Score=102.96 Aligned_cols=174 Identities=14% Similarity=0.159 Sum_probs=112.1
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchh---HHHHH-HHH---------h---------hcCCceeEE
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDK---AVELL-ALA---------Q---------QHSNLHVIE 59 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~---~~~~~-~~~---------~---------~~~~~~~~~ 59 (248)
|+++||||||.||+.++++|++.+- ...+|+++.|.... .+.+. ++. . ...++.++.
T Consensus 12 k~VlvTGaTGFlG~~ll~~LL~~~~-~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~i~ 90 (491)
T PLN02996 12 KTILVTGATGFLAKIFVEKILRVQP-NVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTPVP 90 (491)
T ss_pred CeEEEeCCCcHHHHHHHHHHHhhCC-CCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEEEe
Confidence 6899999999999999999997641 22478999887542 11111 110 0 015789999
Q ss_pred eeccCCchh--hhhHHHHhhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhc
Q psy11190 60 LDVTDFSKQ--QDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEA 137 (248)
Q Consensus 60 ~D~~~~~~~--v~~~~~~i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~ 137 (248)
+|++++.-= -....+.+.+ ++|+|||+|+.... . +..+..+.+|+.++.++++.+...-
T Consensus 91 GDl~~~~LGLs~~~~~~~l~~-----~vD~ViH~AA~v~~----~----~~~~~~~~~Nv~gt~~ll~~a~~~~------ 151 (491)
T PLN02996 91 GDISYDDLGVKDSNLREEMWK-----EIDIVVNLAATTNF----D----ERYDVALGINTLGALNVLNFAKKCV------ 151 (491)
T ss_pred cccCCcCCCCChHHHHHHHHh-----CCCEEEECccccCC----c----CCHHHHHHHHHHHHHHHHHHHHhcC------
Confidence 999854200 0111122222 39999999987532 1 2356677889999999888765420
Q ss_pred ccCCCCCCCCceEEEeecCCCccccc------CC----------------------------------------------
Q psy11190 138 NSAAPLGSSRAAIVNVSSIMGSIEDN------TQ---------------------------------------------- 165 (248)
Q Consensus 138 ~~~~~~~~~~~~iv~vss~~~~~~~~------~~---------------------------------------------- 165 (248)
.-.+++++||........ ++
T Consensus 152 --------~~k~~V~vST~~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (491)
T PLN02996 152 --------KVKMLLHVSTAYVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLG 223 (491)
T ss_pred --------CCCeEEEEeeeEEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhc
Confidence 234688888876432100 00
Q ss_pred -------CCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCC
Q psy11190 166 -------GGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208 (248)
Q Consensus 166 -------~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~ 208 (248)
.....|+.+|+..+.+++..+ .++++..+.|+.|..+.
T Consensus 224 ~~~~~~~~~pn~Y~~TK~~aE~lv~~~~-----~~lpv~i~RP~~V~G~~ 268 (491)
T PLN02996 224 MERAKLHGWPNTYVFTKAMGEMLLGNFK-----ENLPLVIIRPTMITSTY 268 (491)
T ss_pred hhHHHhCCCCCchHhhHHHHHHHHHHhc-----CCCCEEEECCCEeccCC
Confidence 011359999999999997653 27899999998886654
|
|
| >PRK05865 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.21 E-value=1.7e-10 Score=109.52 Aligned_cols=153 Identities=16% Similarity=0.186 Sum_probs=107.9
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhcC
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVKD 82 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~~ 82 (248)
+++||||+|.||++++++|+++| +.|++++|+.... ...++.++.+|++|.+. +..+++
T Consensus 2 kILVTGATGfIGs~La~~Ll~~G----~~Vv~l~R~~~~~--------~~~~v~~v~gDL~D~~~-l~~al~-------- 60 (854)
T PRK05865 2 RIAVTGASGVLGRGLTARLLSQG----HEVVGIARHRPDS--------WPSSADFIAADIRDATA-VESAMT-------- 60 (854)
T ss_pred EEEEECCCCHHHHHHHHHHHHCc----CEEEEEECCchhh--------cccCceEEEeeCCCHHH-HHHHHh--------
Confidence 59999999999999999999999 8999999975321 12357889999999877 554432
Q ss_pred CCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcccc
Q psy11190 83 QGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIED 162 (248)
Q Consensus 83 ~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~~ 162 (248)
++|+|||+|+...+ .+++|+.++.++++++ .+. +.+++|++||..
T Consensus 61 -~vD~VVHlAa~~~~--------------~~~vNv~GT~nLLeAa----~~~-----------gvkr~V~iSS~~----- 105 (854)
T PRK05865 61 -GADVVAHCAWVRGR--------------NDHINIDGTANVLKAM----AET-----------GTGRIVFTSSGH----- 105 (854)
T ss_pred -CCCEEEECCCcccc--------------hHHHHHHHHHHHHHHH----HHc-----------CCCeEEEECCcH-----
Confidence 38999999975321 3467888887766554 332 356899999842
Q ss_pred cCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCC---------C----------CCCCchhhHHHH
Q psy11190 163 NTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGG---------S----------NAPLEVGAATAG 223 (248)
Q Consensus 163 ~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~---------~----------~~~~~~~~~~~~ 223 (248)
|.+.+.+++. .++++..+.|+.+..|-.. . ......+++++.
T Consensus 106 ------------K~aaE~ll~~-------~gl~~vILRp~~VYGP~~~~~i~~ll~~~v~~~G~~~~~~dfIhVdDVA~A 166 (854)
T PRK05865 106 ------------QPRVEQMLAD-------CGLEWVAVRCALIFGRNVDNWVQRLFALPVLPAGYADRVVQVVHSDDAQRL 166 (854)
T ss_pred ------------HHHHHHHHHH-------cCCCEEEEEeceEeCCChHHHHHHHhcCceeccCCCCceEeeeeHHHHHHH
Confidence 7777765532 3677888888777654210 0 012457888888
Q ss_pred HHHHhhh
Q psy11190 224 IIQFIQS 230 (248)
Q Consensus 224 ~~~~~~~ 230 (248)
++..+..
T Consensus 167 i~~aL~~ 173 (854)
T PRK05865 167 LVRALLD 173 (854)
T ss_pred HHHHHhC
Confidence 8887754
|
|
| >COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.10 E-value=4.2e-10 Score=92.27 Aligned_cols=202 Identities=16% Similarity=0.034 Sum_probs=141.2
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHH----H-HHHHhhcCCceeEEeeccCCchhhhhHHHH
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVE----L-LALAQQHSNLHVIELDVTDFSKQQDVLFKD 75 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~----~-~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~ 75 (248)
||++||||-||--|..+|+.|+++| +.|+.+.|.....+. + ........+++++.+|++|..+ +.++++.
T Consensus 2 ~K~ALITGITGQDGsYLa~lLLekG----Y~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~-l~r~l~~ 76 (345)
T COG1089 2 GKVALITGITGQDGSYLAELLLEKG----YEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSN-LLRILEE 76 (345)
T ss_pred CceEEEecccCCchHHHHHHHHhcC----cEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHH-HHHHHHh
Confidence 6899999999999999999999999 999999886443221 2 1112223468899999999888 7777666
Q ss_pred hhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeec
Q psy11190 76 ISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSS 155 (248)
Q Consensus 76 i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss 155 (248)
++ +|-|+|.|+.+.. ..+.++-+.+.+++..|+++++.+.--+- . ...++...||
T Consensus 77 v~-------PdEIYNLaAQS~V-----~vSFe~P~~T~~~~~iGtlrlLEaiR~~~-~------------~~~rfYQASt 131 (345)
T COG1089 77 VQ-------PDEIYNLAAQSHV-----GVSFEQPEYTADVDAIGTLRLLEAIRILG-E------------KKTRFYQAST 131 (345)
T ss_pred cC-------chhheeccccccc-----cccccCcceeeeechhHHHHHHHHHHHhC-C------------cccEEEeccc
Confidence 65 8999999986654 45677778899999999999987753331 1 3566777666
Q ss_pred CCCcc--cc------cCCCCCccchhhHHHHHHHHHHHHhhcc---CCCeEEEEecCcceecCCCCCC------------
Q psy11190 156 IMGSI--ED------NTQGGFHPYRCSKAALNAATRSLSIDLK---GDKIIATAMHPGWVKTDMGGSN------------ 212 (248)
Q Consensus 156 ~~~~~--~~------~~~~~~~~y~~sK~a~~~~~~~la~e~~---~~~i~v~~v~PG~v~t~~~~~~------------ 212 (248)
..-+- .. .|..+.+.|+++|.-..-++...+..+. -.||-+|.=+|.--.|=.++..
T Consensus 132 SE~fG~v~~~pq~E~TPFyPrSPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q 211 (345)
T COG1089 132 SELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGLFACNGILFNHESPLRGETFVTRKITRAVARIKLGLQ 211 (345)
T ss_pred HHhhcCcccCccccCCCCCCCCHHHHHHHHHHheeeehHhhcCceeecceeecCCCCCCccceehHHHHHHHHHHHcccc
Confidence 54221 11 2335677899999988888877776664 3478888777763333222110
Q ss_pred ------------CCCchhhHHHHHHHHhhhcc
Q psy11190 213 ------------APLEVGAATAGIIQFIQSLG 232 (248)
Q Consensus 213 ------------~~~~~~~~~~~~~~~~~~~~ 232 (248)
...-..+-.+++|-++.+..
T Consensus 212 ~~l~lGNldAkRDWG~A~DYVe~mwlmLQq~~ 243 (345)
T COG1089 212 DKLYLGNLDAKRDWGHAKDYVEAMWLMLQQEE 243 (345)
T ss_pred ceEEeccccccccccchHHHHHHHHHHHccCC
Confidence 02346777888888886654
|
|
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=99.08 E-value=9.5e-09 Score=104.18 Aligned_cols=174 Identities=19% Similarity=0.183 Sum_probs=112.5
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHH---hh--------cCCceeEEeeccCCchh-h
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALA---QQ--------HSNLHVIELDVTDFSKQ-Q 69 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~---~~--------~~~~~~~~~D~~~~~~~-v 69 (248)
++++|||++|.||.+++++|++++.....+|+...|+.........+. .. ..++.++.+|++++.-- -
T Consensus 972 ~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl~ 1051 (1389)
T TIGR03443 972 ITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGLS 1051 (1389)
T ss_pred ceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCcC
Confidence 579999999999999999999876111278999999865433322211 10 13688999999865310 0
Q ss_pred hhHHHHhhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCce
Q psy11190 70 DVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAA 149 (248)
Q Consensus 70 ~~~~~~i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~ 149 (248)
...++++. . .+|++||+|+.... ..+.+ .....|+.++.++++.+... +..+
T Consensus 1052 ~~~~~~l~---~--~~d~iiH~Aa~~~~-----~~~~~---~~~~~nv~gt~~ll~~a~~~---------------~~~~ 1103 (1389)
T TIGR03443 1052 DEKWSDLT---N--EVDVIIHNGALVHW-----VYPYS---KLRDANVIGTINVLNLCAEG---------------KAKQ 1103 (1389)
T ss_pred HHHHHHHH---h--cCCEEEECCcEecC-----ccCHH---HHHHhHHHHHHHHHHHHHhC---------------CCce
Confidence 11222222 2 49999999986532 12222 23346888888888765432 2347
Q ss_pred EEEeecCCCccc-----------------cc--------CCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcce
Q psy11190 150 IVNVSSIMGSIE-----------------DN--------TQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWV 204 (248)
Q Consensus 150 iv~vss~~~~~~-----------------~~--------~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v 204 (248)
++++||...... .. .......|+.+|.+.+.+++..+. .|+++..+.||.+
T Consensus 1104 ~v~vSS~~v~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~----~g~~~~i~Rpg~v 1179 (1389)
T TIGR03443 1104 FSFVSSTSALDTEYYVNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGK----RGLRGCIVRPGYV 1179 (1389)
T ss_pred EEEEeCeeecCcccccchhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHh----CCCCEEEECCCcc
Confidence 999999754311 00 001124599999999998876542 4899999999988
Q ss_pred ecC
Q psy11190 205 KTD 207 (248)
Q Consensus 205 ~t~ 207 (248)
..+
T Consensus 1180 ~G~ 1182 (1389)
T TIGR03443 1180 TGD 1182 (1389)
T ss_pred ccC
Confidence 654
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=99.07 E-value=6.8e-09 Score=87.69 Aligned_cols=164 Identities=12% Similarity=0.123 Sum_probs=106.4
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhcC
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVKD 82 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~~ 82 (248)
+++||||||.+|++++++|+++| +.|.+++|++++.. ...+..+.+|+.|.++ +..+++.... ..
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g----~~V~~~~R~~~~~~--------~~~~~~~~~d~~d~~~-l~~a~~~~~~-~~- 65 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAAS----VPFLVASRSSSSSA--------GPNEKHVKFDWLDEDT-WDNPFSSDDG-ME- 65 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCC----CcEEEEeCCCcccc--------CCCCccccccCCCHHH-HHHHHhcccC-cC-
Confidence 38999999999999999999999 89999999987532 2356677899999888 7776654322 11
Q ss_pred CC-ccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 83 QG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 83 ~~-iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
+ +|.++++++... +.. ...+.+++.+++. +-.+||++||.....+
T Consensus 66 -g~~d~v~~~~~~~~----------~~~------------~~~~~~i~aa~~~-----------gv~~~V~~Ss~~~~~~ 111 (285)
T TIGR03649 66 -PEISAVYLVAPPIP----------DLA------------PPMIKFIDFARSK-----------GVRRFVLLSASIIEKG 111 (285)
T ss_pred -CceeEEEEeCCCCC----------Chh------------HHHHHHHHHHHHc-----------CCCEEEEeeccccCCC
Confidence 4 899999876321 000 1123344555443 4568999998544322
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC--------------------CCCCchhhHH
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS--------------------NAPLEVGAAT 221 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~--------------------~~~~~~~~~~ 221 (248)
. ..+...+.+.+.. .++..+.+.|+++..++... .....+++++
T Consensus 112 ~----------~~~~~~~~~l~~~------~gi~~tilRp~~f~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~Dva 175 (285)
T TIGR03649 112 G----------PAMGQVHAHLDSL------GGVEYTVLRPTWFMENFSEEFHVEAIRKENKIYSATGDGKIPFVSADDIA 175 (285)
T ss_pred C----------chHHHHHHHHHhc------cCCCEEEEeccHHhhhhcccccccccccCCeEEecCCCCccCcccHHHHH
Confidence 1 1222222222211 37889999999776543211 1135688999
Q ss_pred HHHHHHhhhc
Q psy11190 222 AGIIQFIQSL 231 (248)
Q Consensus 222 ~~~~~~~~~~ 231 (248)
+.+...+..+
T Consensus 176 ~~~~~~l~~~ 185 (285)
T TIGR03649 176 RVAYRALTDK 185 (285)
T ss_pred HHHHHHhcCC
Confidence 9998888763
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >PLN02778 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Probab=99.06 E-value=1.6e-09 Score=92.31 Aligned_cols=139 Identities=12% Similarity=0.016 Sum_probs=86.4
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||+|.||.+++++|+++| +.|+... .|+.+.+. +...++.
T Consensus 10 ~kiLVtG~tGfiG~~l~~~L~~~g----~~V~~~~-----------------------~~~~~~~~-v~~~l~~------ 55 (298)
T PLN02778 10 LKFLIYGKTGWIGGLLGKLCQEQG----IDFHYGS-----------------------GRLENRAS-LEADIDA------ 55 (298)
T ss_pred CeEEEECCCCHHHHHHHHHHHhCC----CEEEEec-----------------------CccCCHHH-HHHHHHh------
Confidence 469999999999999999999999 7876432 22333333 3332221
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCC--Cc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIM--GS 159 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~--~~ 159 (248)
.++|+|||+||.... ... +...++-...+++|+.++.++++.+... +- +.+++||.+ +.
T Consensus 56 -~~~D~ViH~Aa~~~~-~~~-~~~~~~p~~~~~~Nv~gt~~ll~aa~~~---------------gv-~~v~~sS~~vy~~ 116 (298)
T PLN02778 56 -VKPTHVFNAAGVTGR-PNV-DWCESHKVETIRANVVGTLTLADVCRER---------------GL-VLTNYATGCIFEY 116 (298)
T ss_pred -cCCCEEEECCcccCC-CCc-hhhhhCHHHHHHHHHHHHHHHHHHHHHh---------------CC-CEEEEecceEeCC
Confidence 149999999997643 111 1112334567778999999998887543 22 344454432 11
Q ss_pred c---c------c----cCCCCCccchhhHHHHHHHHHHHHhhccCCCeEE
Q psy11190 160 I---E------D----NTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIA 196 (248)
Q Consensus 160 ~---~------~----~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v 196 (248)
. + . .+.++...|+.+|.+.+.+++.++.. .++|+
T Consensus 117 ~~~~p~~~~~~~~Ee~~p~~~~s~Yg~sK~~~E~~~~~y~~~---~~lr~ 163 (298)
T PLN02778 117 DDAHPLGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKNYENV---CTLRV 163 (298)
T ss_pred CCCCCcccCCCCCcCCCCCCCCCchHHHHHHHHHHHHHhhcc---EEeee
Confidence 1 0 0 01112357999999999999876533 34555
|
|
| >TIGR01777 yfcH conserved hypothetical protein TIGR01777 | Back alignment and domain information |
|---|
Probab=99.06 E-value=1.1e-08 Score=86.26 Aligned_cols=182 Identities=14% Similarity=0.098 Sum_probs=103.1
Q ss_pred EEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhcCC
Q psy11190 4 ILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVKDQ 83 (248)
Q Consensus 4 ~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~~~ 83 (248)
+|||||+|.||.++++.|+++| ++|++++|+.+...... ... ..|+.. .. . .+.+.
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~-------~~~--~~~~~~-~~-~-------~~~~~-- 56 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDG----HEVTILTRSPPAGANTK-------WEG--YKPWAP-LA-E-------SEALE-- 56 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcC----CEEEEEeCCCCCCCccc-------cee--eecccc-cc-h-------hhhcC--
Confidence 5899999999999999999999 99999999876533211 000 112211 11 1 12222
Q ss_pred CccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccccc
Q psy11190 84 GLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDN 163 (248)
Q Consensus 84 ~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~~~ 163 (248)
++|+|||+|+.... ....+.+..+..+++|+.++.++++.+... + ....++++.|+. +.++..
T Consensus 57 ~~D~Vvh~a~~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~---------~~~~~~i~~S~~-~~yg~~ 119 (292)
T TIGR01777 57 GADAVINLAGEPIA---DKRWTEERKQEIRDSRIDTTRALVEAIAAA----E---------QKPKVFISASAV-GYYGTS 119 (292)
T ss_pred CCCEEEECCCCCcc---cccCCHHHHHHHHhcccHHHHHHHHHHHhc----C---------CCceEEEEeeeE-EEeCCC
Confidence 49999999986432 112233444566778888877777766432 0 011234444443 222210
Q ss_pred ---CC------CCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCC------------------C----C
Q psy11190 164 ---TQ------GGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGG------------------S----N 212 (248)
Q Consensus 164 ---~~------~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~------------------~----~ 212 (248)
+. .+...|+..+...+.... .+...++.+..+.|+.+..+... . .
T Consensus 120 ~~~~~~E~~~~~~~~~~~~~~~~~e~~~~----~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 195 (292)
T TIGR01777 120 EDRVFTEEDSPAGDDFLAELCRDWEEAAQ----AAEDLGTRVVLLRTGIVLGPKGGALAKMLPPFRLGLGGPLGSGRQWF 195 (292)
T ss_pred CCCCcCcccCCCCCChHHHHHHHHHHHhh----hchhcCCceEEEeeeeEECCCcchhHHHHHHHhcCcccccCCCCccc
Confidence 00 011122222333333222 22345799999999998765210 0 1
Q ss_pred CCCchhhHHHHHHHHhhh
Q psy11190 213 APLEVGAATAGIIQFIQS 230 (248)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~ 230 (248)
.....+++++.+...+..
T Consensus 196 ~~i~v~Dva~~i~~~l~~ 213 (292)
T TIGR01777 196 SWIHIEDLVQLILFALEN 213 (292)
T ss_pred ccEeHHHHHHHHHHHhcC
Confidence 235688888888888865
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein. |
| >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.02 E-value=2.2e-09 Score=87.92 Aligned_cols=182 Identities=19% Similarity=0.219 Sum_probs=117.8
Q ss_pred EEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhcCC
Q psy11190 4 ILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVKDQ 83 (248)
Q Consensus 4 ~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~~~ 83 (248)
++||||||-||++++.+|.+.| ++|+++.|+..+.+.. +... +...+. +.+... .
T Consensus 1 IliTGgTGlIG~~L~~~L~~~g----h~v~iltR~~~~~~~~---------~~~~---v~~~~~--------~~~~~~-~ 55 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGG----HQVTILTRRPPKASQN---------LHPN---VTLWEG--------LADALT-L 55 (297)
T ss_pred CeEeccccchhHHHHHHHHhCC----CeEEEEEcCCcchhhh---------cCcc---ccccch--------hhhccc-C
Confidence 5899999999999999999999 9999999998764431 1111 111111 111111 1
Q ss_pred CccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccccc
Q psy11190 84 GLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDN 163 (248)
Q Consensus 84 ~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~~~ 163 (248)
++|+|||.||..-..+.+ +.+.-+.. ..+.+..++.+...+.+.+ .++.+..-.|..|+++.
T Consensus 56 ~~DavINLAG~~I~~rrW---t~~~K~~i----~~SRi~~T~~L~e~I~~~~----------~~P~~~isaSAvGyYG~- 117 (297)
T COG1090 56 GIDAVINLAGEPIAERRW---TEKQKEEI----RQSRINTTEKLVELIAASE----------TKPKVLISASAVGYYGH- 117 (297)
T ss_pred CCCEEEECCCCccccccC---CHHHHHHH----HHHHhHHHHHHHHHHHhcc----------CCCcEEEecceEEEecC-
Confidence 399999999975321112 33333333 3378888899888888653 35556666677777776
Q ss_pred CCCCCccchhhHHHHHHHHHHHHhhcc-------CCCeEEEEecCcceecCCCCCC----------------------CC
Q psy11190 164 TQGGFHPYRCSKAALNAATRSLSIDLK-------GDKIIATAMHPGWVKTDMGGSN----------------------AP 214 (248)
Q Consensus 164 ~~~~~~~y~~sK~a~~~~~~~la~e~~-------~~~i~v~~v~PG~v~t~~~~~~----------------------~~ 214 (248)
.....|.-....-+.|...+.++|. .-|+||..+.-|.|-.+-.... ..
T Consensus 118 --~~~~~~tE~~~~g~~Fla~lc~~WE~~a~~a~~~gtRvvllRtGvVLs~~GGaL~~m~~~fk~glGG~~GsGrQ~~SW 195 (297)
T COG1090 118 --SGDRVVTEESPPGDDFLAQLCQDWEEEALQAQQLGTRVVLLRTGVVLSPDGGALGKMLPLFKLGLGGKLGSGRQWFSW 195 (297)
T ss_pred --CCceeeecCCCCCCChHHHHHHHHHHHHhhhhhcCceEEEEEEEEEecCCCcchhhhcchhhhccCCccCCCCceeee
Confidence 4444444444444455555555552 4589999999999877532221 13
Q ss_pred CchhhHHHHHHHHhhh
Q psy11190 215 LEVGAATAGIIQFIQS 230 (248)
Q Consensus 215 ~~~~~~~~~~~~~~~~ 230 (248)
.-.++..+.+.+++..
T Consensus 196 IhieD~v~~I~fll~~ 211 (297)
T COG1090 196 IHIEDLVNAILFLLEN 211 (297)
T ss_pred eeHHHHHHHHHHHHhC
Confidence 5689999999999977
|
|
| >PRK08309 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.98 E-value=3.3e-09 Score=83.35 Aligned_cols=166 Identities=17% Similarity=0.102 Sum_probs=110.5
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhcC
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVKD 82 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~~ 82 (248)
+++||||+ |+|.+++++|+++| ++|++.+|+.++.+.+........++.++++|++|.++ ++.+++.+.+.++
T Consensus 2 ~vlVtGGt-G~gg~la~~L~~~G----~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~s-v~~~i~~~l~~~g- 74 (177)
T PRK08309 2 HALVIGGT-GMLKRVSLWLCEKG----FHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDA-LKLAIKSTIEKNG- 74 (177)
T ss_pred EEEEECcC-HHHHHHHHHHHHCc----CEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHH-HHHHHHHHHHHcC-
Confidence 69999998 77778999999999 89999999987776664433334578889999999999 9999998877766
Q ss_pred CCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcccc
Q psy11190 83 QGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIED 162 (248)
Q Consensus 83 ~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~~ 162 (248)
++|++|+..-... +-++...+-..=.+. ..-+++-+-+..+..+
T Consensus 75 -~id~lv~~vh~~~-----------------------~~~~~~~~~~~gv~~-----------~~~~~~h~~gs~~~~~- 118 (177)
T PRK08309 75 -PFDLAVAWIHSSA-----------------------KDALSVVCRELDGSS-----------ETYRLFHVLGSAASDP- 118 (177)
T ss_pred -CCeEEEEeccccc-----------------------hhhHHHHHHHHccCC-----------CCceEEEEeCCcCCch-
Confidence 5999998765432 122222222211010 2235666654333110
Q ss_pred cCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCCCCchhhHHHHHHHHhhhccc
Q psy11190 163 NTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQSLGE 233 (248)
Q Consensus 163 ~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (248)
+..+....+..+...-|..|++..+-. ...++=+|+.++++..+....+
T Consensus 119 --------------------~~~~~~~~~~~~~~~~i~lgf~~~~~~--~rwlt~~ei~~gv~~~~~~~~~ 167 (177)
T PRK08309 119 --------------------RIPSEKIGPARCSYRRVILGFVLEDTY--SRWLTHEEISDGVIKAIESDAD 167 (177)
T ss_pred --------------------hhhhhhhhhcCCceEEEEEeEEEeCCc--cccCchHHHHHHHHHHHhcCCC
Confidence 111122223456777888999876653 3346779999999999976543
|
|
| >KOG1429|consensus | Back alignment and domain information |
|---|
Probab=98.98 E-value=2.7e-08 Score=81.77 Aligned_cols=164 Identities=17% Similarity=0.062 Sum_probs=113.3
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
++++||||+|.||.+++++|..+| ..|++++-.-..-++..+......++..+.-|+..+ ++ .
T Consensus 28 lrI~itGgaGFIgSHLvdkLm~eg----h~VIa~Dn~ftg~k~n~~~~~~~~~fel~~hdv~~p------l~---~---- 90 (350)
T KOG1429|consen 28 LRILITGGAGFIGSHLVDKLMTEG----HEVIALDNYFTGRKENLEHWIGHPNFELIRHDVVEP------LL---K---- 90 (350)
T ss_pred cEEEEecCcchHHHHHHHHHHhcC----CeEEEEecccccchhhcchhccCcceeEEEeechhH------HH---H----
Confidence 479999999999999999999999 899999876655444444444456777777777543 21 1
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
.+|.++|.|....+.. +- -.--+++..|+.++++.+..+... +.|++..|+..-+-.
T Consensus 91 --evD~IyhLAapasp~~-y~----~npvktIktN~igtln~lglakrv----------------~aR~l~aSTseVYgd 147 (350)
T KOG1429|consen 91 --EVDQIYHLAAPASPPH-YK----YNPVKTIKTNVIGTLNMLGLAKRV----------------GARFLLASTSEVYGD 147 (350)
T ss_pred --HhhhhhhhccCCCCcc-cc----cCccceeeecchhhHHHHHHHHHh----------------CceEEEeecccccCC
Confidence 2888889998776511 11 123467888999999988776554 467888887664332
Q ss_pred c--c-----------CCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCC
Q psy11190 162 D--N-----------TQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208 (248)
Q Consensus 162 ~--~-----------~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~ 208 (248)
+ + +..+...|...|...+.|+....++ .||.|....+--+..|.
T Consensus 148 p~~hpq~e~ywg~vnpigpr~cydegKr~aE~L~~~y~k~---~giE~rIaRifNtyGPr 204 (350)
T KOG1429|consen 148 PLVHPQVETYWGNVNPIGPRSCYDEGKRVAETLCYAYHKQ---EGIEVRIARIFNTYGPR 204 (350)
T ss_pred cccCCCccccccccCcCCchhhhhHHHHHHHHHHHHhhcc---cCcEEEEEeeecccCCc
Confidence 2 1 1123456999999999988887766 46766666655544443
|
|
| >PLN02503 fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Probab=98.97 E-value=2.4e-08 Score=92.06 Aligned_cols=128 Identities=20% Similarity=0.208 Sum_probs=83.3
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHH---HHH-HHH---------hh---------cCCceeEE
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAV---ELL-ALA---------QQ---------HSNLHVIE 59 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~---~~~-~~~---------~~---------~~~~~~~~ 59 (248)
|+++||||||.||+.++++|++.+. ...+|+++.|...... .+. ++. +. ..++.++.
T Consensus 120 k~VlVTGaTGFLGk~LlekLLr~~~-~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v~ 198 (605)
T PLN02503 120 KNFLITGATGFLAKVLIEKILRTNP-DVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPVV 198 (605)
T ss_pred CEEEEcCCchHHHHHHHHHHHHhCC-CCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEEE
Confidence 7899999999999999999998762 1247899988654321 111 111 10 23688999
Q ss_pred eeccCCch-hhhhHHHHhhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcc
Q psy11190 60 LDVTDFSK-QQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEAN 138 (248)
Q Consensus 60 ~D~~~~~~-~v~~~~~~i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ 138 (248)
.|+++..- .-....+.+.+ .+|+|||+|+.... + +..+..+++|+.++.++++.+...-
T Consensus 199 GDl~d~~LGLs~~~~~~L~~-----~vDiVIH~AA~v~f-----~---~~~~~a~~vNV~GT~nLLelA~~~~------- 258 (605)
T PLN02503 199 GNVCESNLGLEPDLADEIAK-----EVDVIINSAANTTF-----D---ERYDVAIDINTRGPCHLMSFAKKCK------- 258 (605)
T ss_pred eeCCCcccCCCHHHHHHHHh-----cCCEEEECcccccc-----c---cCHHHHHHHHHHHHHHHHHHHHHcC-------
Confidence 99998730 00111222222 39999999987532 1 3456677789999999888765431
Q ss_pred cCCCCCCCCceEEEeecCC
Q psy11190 139 SAAPLGSSRAAIVNVSSIM 157 (248)
Q Consensus 139 ~~~~~~~~~~~iv~vss~~ 157 (248)
.-.+++++||..
T Consensus 259 -------~lk~fV~vSTay 270 (605)
T PLN02503 259 -------KLKLFLQVSTAY 270 (605)
T ss_pred -------CCCeEEEccCce
Confidence 123578877754
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.95 E-value=1.7e-08 Score=90.80 Aligned_cols=155 Identities=16% Similarity=0.104 Sum_probs=108.5
Q ss_pred EEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhcCCC
Q psy11190 5 LITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVKDQG 84 (248)
Q Consensus 5 lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~~~~ 84 (248)
+|+||++|+|.++++.|.+.| +.|+...+...+. +.... .+
T Consensus 42 ~l~~~~~g~~~~~~~~~~~~g----~~v~~~~~~~~~~------------------~~~~~-----------------~~ 82 (450)
T PRK08261 42 VLVGGAGRLAEALAALLAGLG----YDVVANNDGGLTW------------------AAGWG-----------------DR 82 (450)
T ss_pred eEEccCchhHHHHHHHHhhCC----CeeeecCcccccc------------------ccCcC-----------------Cc
Confidence 378889999999999999999 8888876654310 00000 02
Q ss_pred ccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcccccC
Q psy11190 85 LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNT 164 (248)
Q Consensus 85 iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~~~~ 164 (248)
++.+++-+.... +.+++ .+.+.+++..++.|. +.|+||+++|..+..
T Consensus 83 ~~~~~~d~~~~~--------~~~~l--------~~~~~~~~~~l~~l~-------------~~griv~i~s~~~~~---- 129 (450)
T PRK08261 83 FGALVFDATGIT--------DPADL--------KALYEFFHPVLRSLA-------------PCGRVVVLGRPPEAA---- 129 (450)
T ss_pred ccEEEEECCCCC--------CHHHH--------HHHHHHHHHHHHhcc-------------CCCEEEEEccccccC----
Confidence 554444332111 12222 244566777777774 368999999976642
Q ss_pred CCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCCCCchhhHHHHHHHHhhhcccccccceeeeCC
Q psy11190 165 QGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQSLGEAHNGGFFEYTG 244 (248)
Q Consensus 165 ~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g 244 (248)
....|+++|+++.+|+++++.|+ +++++++.|.|++ ..++++...+.++.+......+|+.+..++
T Consensus 130 --~~~~~~~akaal~gl~rsla~E~-~~gi~v~~i~~~~-----------~~~~~~~~~~~~l~s~~~a~~~g~~i~~~~ 195 (450)
T PRK08261 130 --ADPAAAAAQRALEGFTRSLGKEL-RRGATAQLVYVAP-----------GAEAGLESTLRFFLSPRSAYVSGQVVRVGA 195 (450)
T ss_pred --CchHHHHHHHHHHHHHHHHHHHh-hcCCEEEEEecCC-----------CCHHHHHHHHHHhcCCccCCccCcEEEecC
Confidence 23469999999999999999999 7899999999986 346777777777777766777888877665
Q ss_pred e
Q psy11190 245 K 245 (248)
Q Consensus 245 ~ 245 (248)
.
T Consensus 196 ~ 196 (450)
T PRK08261 196 A 196 (450)
T ss_pred C
Confidence 4
|
|
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=98.95 E-value=3.2e-08 Score=87.07 Aligned_cols=169 Identities=15% Similarity=0.153 Sum_probs=106.1
Q ss_pred CceEEEe----cCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHH--------HHHhhcCCceeEEeeccCCchh
Q psy11190 1 MKSILIT----GCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELL--------ALAQQHSNLHVIELDVTDFSKQ 68 (248)
Q Consensus 1 ~k~~lVt----Gas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~~~D~~~~~~~ 68 (248)
||++||| ||+|.||.+++++|+++| +.|++++|+......+. ++. ...+.++.+|+.|.+.
T Consensus 52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~G----~~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~v~~v~~D~~d~~~- 124 (378)
T PLN00016 52 KKKVLIVNTNSGGHAFIGFYLAKELVKAG----HEVTLFTRGKEPSQKMKKEPFSRFSELS--SAGVKTVWGDPADVKS- 124 (378)
T ss_pred cceEEEEeccCCCceeEhHHHHHHHHHCC----CEEEEEecCCcchhhhccCchhhhhHhh--hcCceEEEecHHHHHh-
Confidence 4679999 999999999999999999 99999999876533221 111 2247888899876322
Q ss_pred hhhHHHHhhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCc
Q psy11190 69 QDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRA 148 (248)
Q Consensus 69 v~~~~~~i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~ 148 (248)
++ ... ++|+|||+++.. . .+ ++.++..+++. +-.
T Consensus 125 ---~~----~~~---~~d~Vi~~~~~~----------~-----------~~----~~~ll~aa~~~-----------gvk 158 (378)
T PLN00016 125 ---KV----AGA---GFDVVYDNNGKD----------L-----------DE----VEPVADWAKSP-----------GLK 158 (378)
T ss_pred ---hh----ccC---CccEEEeCCCCC----------H-----------HH----HHHHHHHHHHc-----------CCC
Confidence 11 111 499999986521 0 11 23344444442 345
Q ss_pred eEEEeecCCCcccccCCC-----CCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC-----------
Q psy11190 149 AIVNVSSIMGSIEDNTQG-----GFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN----------- 212 (248)
Q Consensus 149 ~iv~vss~~~~~~~~~~~-----~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~----------- 212 (248)
++|++||...+......+ ....+. +|...+.+.+ ..++++..+.|+.+..+.....
T Consensus 159 r~V~~SS~~vyg~~~~~p~~E~~~~~p~~-sK~~~E~~l~-------~~~l~~~ilRp~~vyG~~~~~~~~~~~~~~~~~ 230 (378)
T PLN00016 159 QFLFCSSAGVYKKSDEPPHVEGDAVKPKA-GHLEVEAYLQ-------KLGVNWTSFRPQYIYGPGNNKDCEEWFFDRLVR 230 (378)
T ss_pred EEEEEccHhhcCCCCCCCCCCCCcCCCcc-hHHHHHHHHH-------HcCCCeEEEeceeEECCCCCCchHHHHHHHHHc
Confidence 899999975432211000 011122 7887776653 2478899999998876532110
Q ss_pred --------------CCCchhhHHHHHHHHhhh
Q psy11190 213 --------------APLEVGAATAGIIQFIQS 230 (248)
Q Consensus 213 --------------~~~~~~~~~~~~~~~~~~ 230 (248)
.....+++++.++..+..
T Consensus 231 ~~~i~~~g~g~~~~~~i~v~Dva~ai~~~l~~ 262 (378)
T PLN00016 231 GRPVPIPGSGIQLTQLGHVKDLASMFALVVGN 262 (378)
T ss_pred CCceeecCCCCeeeceecHHHHHHHHHHHhcC
Confidence 013478888888888865
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=98.93 E-value=1.2e-08 Score=96.18 Aligned_cols=144 Identities=14% Similarity=-0.009 Sum_probs=94.2
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
+++|||||+|-||+++++.|.++| +.|.. ...|++|.+. +...++..
T Consensus 381 mkiLVtGa~G~iG~~l~~~L~~~g----~~v~~-----------------------~~~~l~d~~~-v~~~i~~~----- 427 (668)
T PLN02260 381 LKFLIYGRTGWIGGLLGKLCEKQG----IAYEY-----------------------GKGRLEDRSS-LLADIRNV----- 427 (668)
T ss_pred ceEEEECCCchHHHHHHHHHHhCC----CeEEe-----------------------eccccccHHH-HHHHHHhh-----
Confidence 369999999999999999999888 66621 1135666655 55443332
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc-
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI- 160 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~- 160 (248)
++|+|||+|+.... ... +...++-+..+.+|+.++.++++.+... +.+++++||...+-
T Consensus 428 --~pd~Vih~Aa~~~~-~~~-~~~~~~~~~~~~~N~~gt~~l~~a~~~~----------------g~~~v~~Ss~~v~~~ 487 (668)
T PLN02260 428 --KPTHVFNAAGVTGR-PNV-DWCESHKVETIRANVVGTLTLADVCREN----------------GLLMMNFATGCIFEY 487 (668)
T ss_pred --CCCEEEECCcccCC-CCC-ChHHhCHHHHHHHHhHHHHHHHHHHHHc----------------CCeEEEEcccceecC
Confidence 39999999997532 111 1223445677788999999999987653 23456665543211
Q ss_pred ----------cc----cCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecC
Q psy11190 161 ----------ED----NTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHP 201 (248)
Q Consensus 161 ----------~~----~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~P 201 (248)
+. .+.+....|+.+|.+.+.+++.... ...+|+..++.
T Consensus 488 ~~~~~~~~~~p~~E~~~~~~~~~~Yg~sK~~~E~~~~~~~~---~~~~r~~~~~~ 539 (668)
T PLN02260 488 DAKHPEGSGIGFKEEDKPNFTGSFYSKTKAMVEELLREYDN---VCTLRVRMPIS 539 (668)
T ss_pred CcccccccCCCCCcCCCCCCCCChhhHHHHHHHHHHHhhhh---heEEEEEEecc
Confidence 11 0111236799999999999987642 24577776663
|
|
| >TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal | Back alignment and domain information |
|---|
Probab=98.90 E-value=2.6e-09 Score=87.34 Aligned_cols=94 Identities=11% Similarity=0.175 Sum_probs=72.6
Q ss_pred CCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhcCCCccEEE
Q psy11190 10 NRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVKDQGLNVLV 89 (248)
Q Consensus 10 s~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~~~~iD~lv 89 (248)
+||||+++|+.|+++| ++|+++++.. .+. .. ....+|+++.++ +..+++.+.+.++ ++|+||
T Consensus 24 SGgIG~AIA~~la~~G----a~Vvlv~~~~-~l~-------~~---~~~~~Dv~d~~s-~~~l~~~v~~~~g--~iDiLV 85 (227)
T TIGR02114 24 TGHLGKIITETFLSAG----HEVTLVTTKR-ALK-------PE---PHPNLSIREIET-TKDLLITLKELVQ--EHDILI 85 (227)
T ss_pred ccHHHHHHHHHHHHCC----CEEEEEcChh-hcc-------cc---cCCcceeecHHH-HHHHHHHHHHHcC--CCCEEE
Confidence 6899999999999999 8999987631 110 00 124589999998 9999999998887 599999
Q ss_pred eccccCCccccCCCCChhhhhheeeecchhhHHHHH
Q psy11190 90 NNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTK 125 (248)
Q Consensus 90 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~ 125 (248)
||||+... .++.+.+.++|++... .+.+.+.+
T Consensus 86 nnAgv~d~-~~~~~~s~e~~~~~~~---~~~~~~~~ 117 (227)
T TIGR02114 86 HSMAVSDY-TPVYMTDLEQVQASDN---LNEFLSKQ 117 (227)
T ss_pred ECCEeccc-cchhhCCHHHHhhhcc---hhhhhccc
Confidence 99998754 7788889999998744 35555554
|
In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity. |
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=98.78 E-value=1.6e-07 Score=76.91 Aligned_cols=185 Identities=18% Similarity=0.218 Sum_probs=109.1
Q ss_pred EEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhcCC
Q psy11190 4 ILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVKDQ 83 (248)
Q Consensus 4 ~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~~~ 83 (248)
++|+||+|.+|+.+++.|++.+ +.|.++.|+..+ ....++.. ..+.++++|+.|.++ +.+ .+.
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~----~~V~~l~R~~~~-~~~~~l~~--~g~~vv~~d~~~~~~-l~~-------al~-- 63 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAG----FSVRALVRDPSS-DRAQQLQA--LGAEVVEADYDDPES-LVA-------ALK-- 63 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTT----GCEEEEESSSHH-HHHHHHHH--TTTEEEES-TT-HHH-HHH-------HHT--
T ss_pred CEEECCccHHHHHHHHHHHhCC----CCcEEEEeccch-hhhhhhhc--ccceEeecccCCHHH-HHH-------HHc--
Confidence 6899999999999999999988 999999999733 11222222 255778999998777 333 332
Q ss_pred CccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccccc
Q psy11190 84 GLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDN 163 (248)
Q Consensus 84 ~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~~~ 163 (248)
++|.||++.+...+ .+ ......++.++... +-.++|+ ||........
T Consensus 64 g~d~v~~~~~~~~~---------~~--------~~~~~~li~Aa~~a---------------gVk~~v~-ss~~~~~~~~ 110 (233)
T PF05368_consen 64 GVDAVFSVTPPSHP---------SE--------LEQQKNLIDAAKAA---------------GVKHFVP-SSFGADYDES 110 (233)
T ss_dssp TCSEEEEESSCSCC---------CH--------HHHHHHHHHHHHHH---------------T-SEEEE-SEESSGTTTT
T ss_pred CCceEEeecCcchh---------hh--------hhhhhhHHHhhhcc---------------ccceEEE-EEeccccccc
Confidence 49999998875421 11 11223344444332 3345664 4444333110
Q ss_pred -CCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCC----------CC-------------CCC-chh
Q psy11190 164 -TQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGG----------SN-------------APL-EVG 218 (248)
Q Consensus 164 -~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~----------~~-------------~~~-~~~ 218 (248)
...+...+-..|..++.+.+.. +++.+.|.||++...+.. .. ... +.+
T Consensus 111 ~~~~p~~~~~~~k~~ie~~l~~~-------~i~~t~i~~g~f~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (233)
T PF05368_consen 111 SGSEPEIPHFDQKAEIEEYLRES-------GIPYTIIRPGFFMENLLPPFAPVVDIKKSKDVVTLPGPGNQKAVPVTDTR 183 (233)
T ss_dssp TTSTTHHHHHHHHHHHHHHHHHC-------TSEBEEEEE-EEHHHHHTTTHHTTCSCCTSSEEEEETTSTSEEEEEEHHH
T ss_pred ccccccchhhhhhhhhhhhhhhc-------cccceeccccchhhhhhhhhcccccccccceEEEEccCCCccccccccHH
Confidence 0011122334566665544433 788899999976543211 10 023 679
Q ss_pred hHHHHHHHHhhhcccccccceeeeCCe
Q psy11190 219 AATAGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
++++.+...+..+.....+..+..-|.
T Consensus 184 Dvg~~va~il~~p~~~~~~~~~~~~~~ 210 (233)
T PF05368_consen 184 DVGRAVAAILLDPEKHNNGKTIFLAGE 210 (233)
T ss_dssp HHHHHHHHHHHSGGGTTEEEEEEEGGG
T ss_pred HHHHHHHHHHcChHHhcCCEEEEeCCC
Confidence 999999999988555546777765553
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >KOG1202|consensus | Back alignment and domain information |
|---|
Probab=98.75 E-value=7.4e-08 Score=91.76 Aligned_cols=163 Identities=15% Similarity=0.177 Sum_probs=123.3
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchh-HHHH---HHHHhhcCCceeEEeeccCCchhhhhHHHHhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDK-AVEL---LALAQQHSNLHVIELDVTDFSKQQDVLFKDIS 77 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~-~~~~---~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~ 77 (248)
|+++|+||-||.|.++|.+|..+|+ ..+++.+|+--+ ..+. ......+-.+.+-.-|++..+. .+.+++...
T Consensus 1769 ksYii~GGLGGFGLELaqWLi~RGa---r~lVLtSRsGirtGYQa~~vrrWr~~GVqV~vsT~nitt~~g-a~~Li~~s~ 1844 (2376)
T KOG1202|consen 1769 KSYIIVGGLGGFGLELAQWLIQRGA---RKLVLTSRSGIRTGYQALMVRRWRRRGVQVQVSTSNITTAEG-ARGLIEESN 1844 (2376)
T ss_pred ceEEEeccccchhHHHHHHHHhcCc---eEEEEeccccchhhHHHHHHHHHHhcCeEEEEecccchhhhh-HHHHHHHhh
Confidence 6899999999999999999999997 788888887543 1221 2233333355555555665555 666666655
Q ss_pred hhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCC
Q psy11190 78 DVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIM 157 (248)
Q Consensus 78 ~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~ 157 (248)
+.. .+-.+||.|.+... ..+++.++++|+..-+..+.+++++-+.--.... .=-.+|.+||+.
T Consensus 1845 kl~---~vGGiFnLA~VLRD-~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~-------------~LdyFv~FSSvs 1907 (2376)
T KOG1202|consen 1845 KLG---PVGGIFNLAAVLRD-GLIENQTPKNFKDVAKPKYSGTINLDRVSREICP-------------ELDYFVVFSSVS 1907 (2376)
T ss_pred hcc---cccchhhHHHHHHh-hhhcccChhHHHhhhccceeeeeehhhhhhhhCc-------------ccceEEEEEeec
Confidence 543 48899999998877 7889999999999999999999998665433322 234689999999
Q ss_pred CcccccCCCCCccchhhHHHHHHHHHHHHhh
Q psy11190 158 GSIEDNTQGGFHPYRCSKAALNAATRSLSID 188 (248)
Q Consensus 158 ~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e 188 (248)
.-+++ .++..|+-+..+++.+++--+.+
T Consensus 1908 cGRGN---~GQtNYG~aNS~MERiceqRr~~ 1935 (2376)
T KOG1202|consen 1908 CGRGN---AGQTNYGLANSAMERICEQRRHE 1935 (2376)
T ss_pred ccCCC---CcccccchhhHHHHHHHHHhhhc
Confidence 88888 88999999999999999766543
|
|
| >KOG0747|consensus | Back alignment and domain information |
|---|
Probab=98.74 E-value=2.2e-07 Score=76.49 Aligned_cols=175 Identities=18% Similarity=0.107 Sum_probs=117.1
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCc--hhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNK--DKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|.++||||.+.||...+..++.+= ..++.+.++.-. ..+..+ +.....++..+++.|+.+... +..++
T Consensus 7 ~~vlItgg~gfi~Sn~~~~~~~~~--p~~~~v~idkL~~~s~~~~l-~~~~n~p~ykfv~~di~~~~~-~~~~~------ 76 (331)
T KOG0747|consen 7 KNVLITGGAGFIGSNFINYLVDKY--PDYKFVNLDKLDYCSNLKNL-EPVRNSPNYKFVEGDIADADL-VLYLF------ 76 (331)
T ss_pred ceEEEecCcCcchhhhhhhcccCC--CCCcEEEEeecccccccchh-hhhccCCCceEeeccccchHH-HHhhh------
Confidence 579999999999999999999644 345555543211 112222 223346688999999998776 43332
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
-...+|.|+|-|..... +.+.-+--.....|++++..|++...... .-.++|.+|+..-.
T Consensus 77 -~~~~id~vihfaa~t~v-----d~s~~~~~~~~~nnil~t~~Lle~~~~sg--------------~i~~fvhvSTdeVY 136 (331)
T KOG0747|consen 77 -ETEEIDTVIHFAAQTHV-----DRSFGDSFEFTKNNILSTHVLLEAVRVSG--------------NIRRFVHVSTDEVY 136 (331)
T ss_pred -ccCchhhhhhhHhhhhh-----hhhcCchHHHhcCCchhhhhHHHHHHhcc--------------CeeEEEEeccccee
Confidence 11249999999987643 22333334455668999888888766653 23568999876532
Q ss_pred ccc---------cCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCC
Q psy11190 160 IED---------NTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMG 209 (248)
Q Consensus 160 ~~~---------~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~ 209 (248)
... ....+...|+++|+|.+++.+++.+.+ |+.+..+.-+-|..|-.
T Consensus 137 Gds~~~~~~~E~s~~nPtnpyAasKaAaE~~v~Sy~~sy---~lpvv~~R~nnVYGP~q 192 (331)
T KOG0747|consen 137 GDSDEDAVVGEASLLNPTNPYAASKAAAEMLVRSYGRSY---GLPVVTTRMNNVYGPNQ 192 (331)
T ss_pred cCccccccccccccCCCCCchHHHHHHHHHHHHHHhhcc---CCcEEEEeccCccCCCc
Confidence 211 111245679999999999999999875 57777777777777653
|
|
| >PRK12320 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.63 E-value=2.2e-07 Score=86.92 Aligned_cols=158 Identities=11% Similarity=0.113 Sum_probs=100.6
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
+++|||||+|.||++++++|+++| +.|++++|..... ....+.++++|+++. . +.. .+.
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~G----~~Vi~ldr~~~~~--------~~~~ve~v~~Dl~d~-~-l~~-------al~ 59 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAAG----HTVSGIAQHPHDA--------LDPRVDYVCASLRNP-V-LQE-------LAG 59 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCC----CEEEEEeCChhhc--------ccCCceEEEccCCCH-H-HHH-------Hhc
Confidence 159999999999999999999999 9999999864321 124678899999875 2 222 122
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+|||+|+.... .. ..+|+.++.++++.+.. .+.++|++||..+.
T Consensus 60 --~~D~VIHLAa~~~~-------~~------~~vNv~Gt~nLleAA~~----------------~GvRiV~~SS~~G~-- 106 (699)
T PRK12320 60 --EADAVIHLAPVDTS-------AP------GGVGITGLAHVANAAAR----------------AGARLLFVSQAAGR-- 106 (699)
T ss_pred --CCCEEEEcCccCcc-------ch------hhHHHHHHHHHHHHHHH----------------cCCeEEEEECCCCC--
Confidence 38999999986321 00 13577777777766533 13479999876431
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC---------------CCC---chhhHHHH
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN---------------APL---EVGAATAG 223 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~---------------~~~---~~~~~~~~ 223 (248)
+ ..|.. .+.+.+ . .++.+..+.|+.+..+-.... .+. ..+++++.
T Consensus 107 ----~--~~~~~----aE~ll~----~---~~~p~~ILR~~nVYGp~~~~~~~r~I~~~l~~~~~~~pI~vIyVdDvv~a 169 (699)
T PRK12320 107 ----P--ELYRQ----AETLVS----T---GWAPSLVIRIAPPVGRQLDWMVCRTVATLLRSKVSARPIRVLHLDDLVRF 169 (699)
T ss_pred ----C--ccccH----HHHHHH----h---cCCCEEEEeCceecCCCCcccHhHHHHHHHHHHHcCCceEEEEHHHHHHH
Confidence 1 11321 222221 1 236677777777766532211 112 57888888
Q ss_pred HHHHhhh
Q psy11190 224 IIQFIQS 230 (248)
Q Consensus 224 ~~~~~~~ 230 (248)
++..+..
T Consensus 170 lv~al~~ 176 (699)
T PRK12320 170 LVLALNT 176 (699)
T ss_pred HHHHHhC
Confidence 8887764
|
|
| >KOG1203|consensus | Back alignment and domain information |
|---|
Probab=98.48 E-value=3.6e-06 Score=73.66 Aligned_cols=170 Identities=19% Similarity=0.194 Sum_probs=106.9
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
+.+++|+||||.+|+-+++.|.++| ..|.++.|+.++.+.+............+..|.....+.... +.+..
T Consensus 79 ~~~VlVvGatG~vG~~iv~~llkrg----f~vra~VRd~~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~----~~~~~ 150 (411)
T KOG1203|consen 79 PTTVLVVGATGKVGRRIVKILLKRG----FSVRALVRDEQKAEDLLGVFFVDLGLQNVEADVVTAIDILKK----LVEAV 150 (411)
T ss_pred CCeEEEecCCCchhHHHHHHHHHCC----CeeeeeccChhhhhhhhcccccccccceeeeccccccchhhh----hhhhc
Confidence 3589999999999999999999999 999999999988777644222233445555665554331222 22222
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+. ...+++.++|.-+. . + +...-+.+.+.|..+++.++... +--+++.++++.+..
T Consensus 151 ~~-~~~~v~~~~ggrp~-~---e----d~~~p~~VD~~g~knlvdA~~~a---------------Gvk~~vlv~si~~~~ 206 (411)
T KOG1203|consen 151 PK-GVVIVIKGAGGRPE-E---E----DIVTPEKVDYEGTKNLVDACKKA---------------GVKRVVLVGSIGGTK 206 (411)
T ss_pred cc-cceeEEecccCCCC-c---c----cCCCcceecHHHHHHHHHHHHHh---------------CCceEEEEEeecCcc
Confidence 21 25677777775432 1 1 34455567788999999888443 445799999888765
Q ss_pred cccCCCCCccchhhHHHHHHHHH--HHHhhccCCCeEEEEecCcceecCC
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATR--SLSIDLKGDKIIATAMHPGWVKTDM 208 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~--~la~e~~~~~i~v~~v~PG~v~t~~ 208 (248)
... +.+. + ......+.. .....+...|+.-..|.||..+.+.
T Consensus 207 ~~~--~~~~-~---~~~~~~~~~k~~~e~~~~~Sgl~ytiIR~g~~~~~~ 250 (411)
T KOG1203|consen 207 FNQ--PPNI-L---LLNGLVLKAKLKAEKFLQDSGLPYTIIRPGGLEQDT 250 (411)
T ss_pred cCC--Cchh-h---hhhhhhhHHHHhHHHHHHhcCCCcEEEeccccccCC
Confidence 542 2122 2 211111111 2223334678999999999887654
|
|
| >PRK06732 phosphopantothenate--cysteine ligase; Validated | Back alignment and domain information |
|---|
Probab=98.42 E-value=7.9e-07 Score=72.82 Aligned_cols=96 Identities=20% Similarity=0.279 Sum_probs=63.1
Q ss_pred EecCCC-chhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhcCCC
Q psy11190 6 ITGCNR-GLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVKDQG 84 (248)
Q Consensus 6 VtGas~-giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~~~~ 84 (248)
||+.|+ +||+++|++|+++| ++|++++|+..... .....+.++.+ +. ...+.+.+.+.++ .
T Consensus 20 itN~SSG~iG~aLA~~L~~~G----~~V~li~r~~~~~~------~~~~~v~~i~v-----~s-~~~m~~~l~~~~~--~ 81 (229)
T PRK06732 20 ITNHSTGQLGKIIAETFLAAG----HEVTLVTTKTAVKP------EPHPNLSIIEI-----EN-VDDLLETLEPLVK--D 81 (229)
T ss_pred ecCccchHHHHHHHHHHHhCC----CEEEEEECcccccC------CCCCCeEEEEE-----ec-HHHHHHHHHHHhc--C
Confidence 444455 49999999999999 89999987642100 01124455543 22 4444555555555 4
Q ss_pred ccEEEeccccCCccccCCCCChhhhhheeeecchhh
Q psy11190 85 LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAP 120 (248)
Q Consensus 85 iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~ 120 (248)
+|+||||||.... .+....+.+++...+++|.+..
T Consensus 82 ~DivIh~AAvsd~-~~~~~~~~~~~~~~~~v~~~~~ 116 (229)
T PRK06732 82 HDVLIHSMAVSDY-TPVYMTDLEEVSASDNLNEFLT 116 (229)
T ss_pred CCEEEeCCccCCc-eehhhhhhhhhhhhhhhhhhhc
Confidence 9999999998763 5566667788888877765443
|
|
| >PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated | Back alignment and domain information |
|---|
Probab=98.39 E-value=1.5e-06 Score=76.62 Aligned_cols=76 Identities=17% Similarity=0.248 Sum_probs=55.8
Q ss_pred ceEEEecC---------------CCc-hhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCC
Q psy11190 2 KSILITGC---------------NRG-LGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDF 65 (248)
Q Consensus 2 k~~lVtGa---------------s~g-iG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 65 (248)
|++||||| |+| +|.++|++|+++| ++|++++++.+ .. .. ..+..+|+++.
T Consensus 189 k~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~G----a~V~~v~~~~~-~~--------~~-~~~~~~dv~~~ 254 (399)
T PRK05579 189 KRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRG----ADVTLVSGPVN-LP--------TP-AGVKRIDVESA 254 (399)
T ss_pred CEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCC----CEEEEeCCCcc-cc--------CC-CCcEEEccCCH
Confidence 68999999 555 9999999999999 89999998753 11 01 12346788875
Q ss_pred chhhhhHHHHhhhhhcCCCccEEEeccccCCc
Q psy11190 66 SKQQDVLFKDISDVVKDQGLNVLVNNAGIAAK 97 (248)
Q Consensus 66 ~~~v~~~~~~i~~~~~~~~iD~lv~~ag~~~~ 97 (248)
++ .. +.+.+.++ ++|++|||||+...
T Consensus 255 ~~-~~---~~v~~~~~--~~DilI~~Aav~d~ 280 (399)
T PRK05579 255 QE-ML---DAVLAALP--QADIFIMAAAVADY 280 (399)
T ss_pred HH-HH---HHHHHhcC--CCCEEEEccccccc
Confidence 55 44 44445565 59999999998754
|
|
| >cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase | Back alignment and domain information |
|---|
Probab=98.37 E-value=2.6e-06 Score=67.94 Aligned_cols=79 Identities=16% Similarity=0.206 Sum_probs=58.4
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
++++|+||+|++|+.+++.|+++| ++|++++|+.++++++.+............+|..+.++ .... +.
T Consensus 29 ~~vlVlGgtG~iG~~~a~~l~~~g----~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~-~~~~---~~---- 96 (194)
T cd01078 29 KTAVVLGGTGPVGQRAAVLLAREG----ARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAA-RAAA---IK---- 96 (194)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC----CEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHH-HHHH---Hh----
Confidence 579999999999999999999999 89999999988877775444322344556677776555 3332 22
Q ss_pred CCCccEEEecccc
Q psy11190 82 DQGLNVLVNNAGI 94 (248)
Q Consensus 82 ~~~iD~lv~~ag~ 94 (248)
+.|+||++...
T Consensus 97 --~~diVi~at~~ 107 (194)
T cd01078 97 --GADVVFAAGAA 107 (194)
T ss_pred --cCCEEEECCCC
Confidence 38988887654
|
Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo |
| >PRK12548 shikimate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.37 E-value=2.1e-06 Score=72.86 Aligned_cols=80 Identities=18% Similarity=0.153 Sum_probs=57.1
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCc---hhHHHHHHHH-hhcCCceeEEeeccCCchhhhhHHHHhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNK---DKAVELLALA-QQHSNLHVIELDVTDFSKQQDVLFKDIS 77 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~---~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~v~~~~~~i~ 77 (248)
|+++|+|+ ||+|++++..|++.|+ .+|++++|+. ++++++.+.. .....+.+..+|+++.++ ++.
T Consensus 127 k~vlI~GA-GGagrAia~~La~~G~---~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~-~~~------ 195 (289)
T PRK12548 127 KKLTVIGA-GGAATAIQVQCALDGA---KEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEK-LKA------ 195 (289)
T ss_pred CEEEEECC-cHHHHHHHHHHHHCCC---CEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhH-HHh------
Confidence 68999999 6999999999999994 4599999997 5666664333 223455666788876555 332
Q ss_pred hhhcCCCccEEEeccccC
Q psy11190 78 DVVKDQGLNVLVNNAGIA 95 (248)
Q Consensus 78 ~~~~~~~iD~lv~~ag~~ 95 (248)
.+. ..|+||||....
T Consensus 196 -~~~--~~DilINaTp~G 210 (289)
T PRK12548 196 -EIA--SSDILVNATLVG 210 (289)
T ss_pred -hhc--cCCEEEEeCCCC
Confidence 222 379999998644
|
|
| >KOG1431|consensus | Back alignment and domain information |
|---|
Probab=98.36 E-value=1.6e-05 Score=63.76 Aligned_cols=154 Identities=14% Similarity=0.124 Sum_probs=95.6
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
||+++|||++|-.|++|.+.+.++|- ..-..++.++ -.+|+++.++ ++.++++.+
T Consensus 1 s~kIlVtGg~GLVGsAi~~vv~~q~~-~~e~wvf~~s--------------------kd~DLt~~a~-t~~lF~~ek--- 55 (315)
T KOG1431|consen 1 SKKILVTGGTGLVGSAIVKVVQEQGF-DDENWVFIGS--------------------KDADLTNLAD-TRALFESEK--- 55 (315)
T ss_pred CceEEEecCCchHHHHHHHHHHhcCC-CCcceEEecc--------------------ccccccchHH-HHHHHhccC---
Confidence 78999999999999999999998882 1112222221 2589999888 777766544
Q ss_pred cCCCccEEEeccccCCccccCCC--CChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGL--LKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
+.++||.|+..+ +.+.. ...+-|...+++| -++++.+... +--.++++.|.+-
T Consensus 56 ----PthVIhlAAmVG--Glf~N~~ynldF~r~Nl~in----dNVlhsa~e~---------------gv~K~vsclStCI 110 (315)
T KOG1431|consen 56 ----PTHVIHLAAMVG--GLFHNNTYNLDFIRKNLQIN----DNVLHSAHEH---------------GVKKVVSCLSTCI 110 (315)
T ss_pred ----CceeeehHhhhc--chhhcCCCchHHHhhcceec----hhHHHHHHHh---------------chhhhhhhcceee
Confidence 889999997654 33332 3445566655554 3555555554 2223555555553
Q ss_pred cccc-------------cCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecC
Q psy11190 159 SIED-------------NTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTD 207 (248)
Q Consensus 159 ~~~~-------------~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~ 207 (248)
+-.. ++.+..-.|+.+|..+.-..+..+.++ |-...++.|--+..|
T Consensus 111 fPdkt~yPIdEtmvh~gpphpsN~gYsyAKr~idv~n~aY~~qh---g~~~tsviPtNvfGp 169 (315)
T KOG1431|consen 111 FPDKTSYPIDETMVHNGPPHPSNFGYSYAKRMIDVQNQAYRQQH---GRDYTSVIPTNVFGP 169 (315)
T ss_pred cCCCCCCCCCHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHh---CCceeeeccccccCC
Confidence 3221 122334469999987777777777664 445566666544443
|
|
| >KOG1221|consensus | Back alignment and domain information |
|---|
Probab=98.35 E-value=1.3e-05 Score=71.38 Aligned_cols=131 Identities=20% Similarity=0.250 Sum_probs=88.4
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchh--H-HH--------H-HHHHhhc----CCceeEEeeccCC
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDK--A-VE--------L-LALAQQH----SNLHVIELDVTDF 65 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~--~-~~--------~-~~~~~~~----~~~~~~~~D~~~~ 65 (248)
|+++||||||.+|+-++++|++.--+.+ +++++-|.... . +. + ..+.+.. .++..+.+|++++
T Consensus 13 k~i~vTG~tGFlgKVliEklLr~~p~v~-~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~~~ 91 (467)
T KOG1221|consen 13 KTIFVTGATGFLGKVLIEKLLRTTPDVK-RIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDISEP 91 (467)
T ss_pred CeEEEEcccchhHHHHHHHHHhcCcCcc-eEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccccCc
Confidence 7899999999999999999998764344 88888775432 1 11 1 1122222 3788999999887
Q ss_pred chhhhhHHHHhhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCC
Q psy11190 66 SKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGS 145 (248)
Q Consensus 66 ~~~v~~~~~~i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~ 145 (248)
+-=++.- ..+.... .+|++||+|+.... .|.++..+.+|..|+.++.+.+.....-
T Consensus 92 ~LGis~~--D~~~l~~--eV~ivih~AAtvrF--------de~l~~al~iNt~Gt~~~l~lak~~~~l------------ 147 (467)
T KOG1221|consen 92 DLGISES--DLRTLAD--EVNIVIHSAATVRF--------DEPLDVALGINTRGTRNVLQLAKEMVKL------------ 147 (467)
T ss_pred ccCCChH--HHHHHHh--cCCEEEEeeeeecc--------chhhhhhhhhhhHhHHHHHHHHHHhhhh------------
Confidence 5422211 1111222 49999999987543 2457788899999999999887776443
Q ss_pred CCceEEEeecCCCc
Q psy11190 146 SRAAIVNVSSIMGS 159 (248)
Q Consensus 146 ~~~~iv~vss~~~~ 159 (248)
-.++.+|+....
T Consensus 148 --~~~vhVSTAy~n 159 (467)
T KOG1221|consen 148 --KALVHVSTAYSN 159 (467)
T ss_pred --heEEEeehhhee
Confidence 247778776654
|
|
| >COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.26 E-value=4.4e-06 Score=72.86 Aligned_cols=80 Identities=24% Similarity=0.394 Sum_probs=64.5
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|+.+||.|+ |++|+.+|..|+++|+ ..|++.+|+.+++.++.... .+++.++++|+.|.+. ..++ +.+
T Consensus 1 m~~ilviGa-G~Vg~~va~~la~~~d---~~V~iAdRs~~~~~~i~~~~--~~~v~~~~vD~~d~~a-l~~l---i~~-- 68 (389)
T COG1748 1 MMKILVIGA-GGVGSVVAHKLAQNGD---GEVTIADRSKEKCARIAELI--GGKVEALQVDAADVDA-LVAL---IKD-- 68 (389)
T ss_pred CCcEEEECC-chhHHHHHHHHHhCCC---ceEEEEeCCHHHHHHHHhhc--cccceeEEecccChHH-HHHH---Hhc--
Confidence 788999999 9999999999999996 89999999998888775443 3389999999998665 3332 332
Q ss_pred cCCCccEEEeccccCC
Q psy11190 81 KDQGLNVLVNNAGIAA 96 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~ 96 (248)
.|++|+++....
T Consensus 69 ----~d~VIn~~p~~~ 80 (389)
T COG1748 69 ----FDLVINAAPPFV 80 (389)
T ss_pred ----CCEEEEeCCchh
Confidence 599999987543
|
|
| >COG4982 3-oxoacyl-[acyl-carrier protein] | Back alignment and domain information |
|---|
Probab=98.25 E-value=4.2e-05 Score=69.37 Aligned_cols=223 Identities=20% Similarity=0.210 Sum_probs=134.0
Q ss_pred ceEEEecCC-CchhHHHHHHHHhCCCCCCceEEEeecCchhH-HHH-HHHHhh----cCCceeEEeeccCCchhhhhHHH
Q psy11190 2 KSILITGCN-RGLGLGMIKVLVGLGNNQPAHIFATCRNKDKA-VEL-LALAQQ----HSNLHVIELDVTDFSKQQDVLFK 74 (248)
Q Consensus 2 k~~lVtGas-~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~-~~~-~~~~~~----~~~~~~~~~D~~~~~~~v~~~~~ 74 (248)
|++||||++ +.||.+++..|++.| +.||++..+-.+. .+. +.+-.. +..+-++.++..+..+ +..+++
T Consensus 397 ~valVTGA~~gSIaa~Vv~~LL~gG----AtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysD-VdAlIe 471 (866)
T COG4982 397 KVALVTGASKGSIAAAVVARLLAGG----ATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSD-VDALIE 471 (866)
T ss_pred ceEEEecCCCcchHHHHHHHHHhCC----cEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhh-HHHHHH
Confidence 689999999 779999999999999 8999987765432 222 444333 3367889999999999 999999
Q ss_pred HhhhhhcC------------CCccEEEeccccCCccccCCCCCh-hhhhheeeecchhhHHHHHHHhHHHHhhhhcccCC
Q psy11190 75 DISDVVKD------------QGLNVLVNNAGIAAKFTRLGLLKP-EQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAA 141 (248)
Q Consensus 75 ~i~~~~~~------------~~iD~lv~~ag~~~~~~~~~~~~~-~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~ 141 (248)
+|-..-.. -.+|.+|--|.+... ..+.+..+ .+++. .+-+.....++- -+++++..++
T Consensus 472 wIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~-G~l~~agsraE~~~--rilLw~V~Rlig----gl~~~~s~r~-- 542 (866)
T COG4982 472 WIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVS-GELADAGSRAEFAM--RILLWNVLRLIG----GLKKQGSSRG-- 542 (866)
T ss_pred HhccccccccCCcceecccccCcceeeecccCCcc-CccccCCchHHHHH--HHHHHHHHHHHH----HhhhhccccC--
Confidence 98765321 136777776665433 33333322 22222 122222222222 2222211110
Q ss_pred CCCCCCceEEEeecCCCcccccCCCCCccchhhHHHHHHHHHHHHhhcc-CCCeEEEEecCccee-cCCCCCCC------
Q psy11190 142 PLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLK-GDKIIATAMHPGWVK-TDMGGSNA------ 213 (248)
Q Consensus 142 ~~~~~~~~iv~vss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~-~~~i~v~~v~PG~v~-t~~~~~~~------ 213 (248)
-+ .+-++|.=.|.. ++. ..+-+.|+-+|.+++.+..-+..|-. ...+.+..-.=||++ |.++..+.
T Consensus 543 -v~-~R~hVVLPgSPN--rG~--FGgDGaYgEsK~aldav~~RW~sEs~Wa~~vsl~~A~IGWtrGTGLMg~Ndiiv~ai 616 (866)
T COG4982 543 -VD-TRLHVVLPGSPN--RGM--FGGDGAYGESKLALDAVVNRWHSESSWAARVSLAHALIGWTRGTGLMGHNDIIVAAI 616 (866)
T ss_pred -cc-cceEEEecCCCC--CCc--cCCCcchhhHHHHHHHHHHHhhccchhhHHHHHhhhheeeeccccccCCcchhHHHH
Confidence 00 123455545533 111 14567999999999998876665532 123666667778884 56665543
Q ss_pred ------CCchhhHHHHHHHHhhhccc---ccccceeeeCC
Q psy11190 214 ------PLEVGAATAGIIQFIQSLGE---AHNGGFFEYTG 244 (248)
Q Consensus 214 ------~~~~~~~~~~~~~~~~~~~~---~~~g~~~~~~g 244 (248)
..+++|.+..++.+++.... ....-+++.+|
T Consensus 617 Ek~GV~tyS~~EmA~~LLgL~saev~e~a~~~PI~aDLtG 656 (866)
T COG4982 617 EKAGVRTYSTDEMAFNLLGLASAEVVELAASSPITADLTG 656 (866)
T ss_pred HHhCceecCHHHHHHHHHhhccHHHHHHHhcCCeEeeccC
Confidence 46899999999988865432 23333444444
|
|
| >COG2910 Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.23 E-value=0.00013 Score=56.81 Aligned_cols=178 Identities=15% Similarity=0.149 Sum_probs=117.0
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|| +.|.||||-.|..++++..++| +.|..+.||+.+.... ..+.+++.|+.|+++ +. +.+
T Consensus 1 mK-IaiIgAsG~~Gs~i~~EA~~RG----HeVTAivRn~~K~~~~-------~~~~i~q~Difd~~~-~a-------~~l 60 (211)
T COG2910 1 MK-IAIIGASGKAGSRILKEALKRG----HEVTAIVRNASKLAAR-------QGVTILQKDIFDLTS-LA-------SDL 60 (211)
T ss_pred Ce-EEEEecCchhHHHHHHHHHhCC----CeeEEEEeChHhcccc-------ccceeecccccChhh-hH-------hhh
Confidence 65 5566999999999999999999 9999999998875532 366789999999877 32 222
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
- +.|+||..-|...+ +.+. -+..-.++++..++.. +..|++.++...+..
T Consensus 61 ~--g~DaVIsA~~~~~~-------~~~~----------~~~k~~~~li~~l~~a-----------gv~RllVVGGAGSL~ 110 (211)
T COG2910 61 A--GHDAVISAFGAGAS-------DNDE----------LHSKSIEALIEALKGA-----------GVPRLLVVGGAGSLE 110 (211)
T ss_pred c--CCceEEEeccCCCC-------ChhH----------HHHHHHHHHHHHHhhc-----------CCeeEEEEcCccceE
Confidence 2 48999998876532 1111 1112256666666664 567888888765544
Q ss_pred cccCC-----C--CCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC----------------CCCch
Q psy11190 161 EDNTQ-----G--GFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN----------------APLEV 217 (248)
Q Consensus 161 ~~~~~-----~--~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~----------------~~~~~ 217 (248)
-.+.. + +-..|..+++..+ +...|..+ .++.-+-|+|..+-.|--+.. ...+.
T Consensus 111 id~g~rLvD~p~fP~ey~~~A~~~ae-~L~~Lr~~---~~l~WTfvSPaa~f~PGerTg~yrlggD~ll~n~~G~SrIS~ 186 (211)
T COG2910 111 IDEGTRLVDTPDFPAEYKPEALAQAE-FLDSLRAE---KSLDWTFVSPAAFFEPGERTGNYRLGGDQLLVNAKGESRISY 186 (211)
T ss_pred EcCCceeecCCCCchhHHHHHHHHHH-HHHHHhhc---cCcceEEeCcHHhcCCccccCceEeccceEEEcCCCceeeeH
Confidence 32111 1 1223444444433 33455544 348899999998877743321 13678
Q ss_pred hhHHHHHHHHhhhcc
Q psy11190 218 GAATAGIIQFIQSLG 232 (248)
Q Consensus 218 ~~~~~~~~~~~~~~~ 232 (248)
++-+-+++..+..+.
T Consensus 187 aDYAiA~lDe~E~~~ 201 (211)
T COG2910 187 ADYAIAVLDELEKPQ 201 (211)
T ss_pred HHHHHHHHHHHhccc
Confidence 888888888887754
|
|
| >KOG2865|consensus | Back alignment and domain information |
|---|
Probab=98.23 E-value=2.7e-05 Score=64.47 Aligned_cols=190 Identities=19% Similarity=0.202 Sum_probs=116.2
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhcC
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVKD 82 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~~ 82 (248)
++-|.||||.+|+.++.+|++-| .+|++--|-.+.-..-.+....-+.+.+...|+.|+++ ++++++
T Consensus 63 VaTVFGAtGFlGryvvnklak~G----SQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd~~DedS-Ir~vvk-------- 129 (391)
T KOG2865|consen 63 VATVFGATGFLGRYVVNKLAKMG----SQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFDLRDEDS-IRAVVK-------- 129 (391)
T ss_pred EEEEecccccccHHHHHHHhhcC----CeEEEeccCCccchhheeecccccceeeeccCCCCHHH-HHHHHH--------
Confidence 57799999999999999999999 99999988765433224455556789999999999999 665532
Q ss_pred CCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcccc
Q psy11190 83 QGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIED 162 (248)
Q Consensus 83 ~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~~ 162 (248)
.-+++||..|.-.+.+ ..+.+ ++|+.+.-.+++.+-.. +--++|-+|+..+....
T Consensus 130 -~sNVVINLIGrd~eTk---nf~f~------Dvn~~~aerlAricke~---------------GVerfIhvS~Lganv~s 184 (391)
T KOG2865|consen 130 -HSNVVINLIGRDYETK---NFSFE------DVNVHIAERLARICKEA---------------GVERFIHVSCLGANVKS 184 (391)
T ss_pred -hCcEEEEeeccccccC---Ccccc------cccchHHHHHHHHHHhh---------------ChhheeehhhccccccC
Confidence 2679999998765422 22222 34555555555444332 34568888887655432
Q ss_pred cCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCC----------C--------------CCCCCchh
Q psy11190 163 NTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMG----------G--------------SNAPLEVG 218 (248)
Q Consensus 163 ~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~----------~--------------~~~~~~~~ 218 (248)
.+-|=-+|++-+--+ ..++. ..+.|.|.-+....- + -..+....
T Consensus 185 -----~Sr~LrsK~~gE~aV---rdafP----eAtIirPa~iyG~eDrfln~ya~~~rk~~~~pL~~~GekT~K~PVyV~ 252 (391)
T KOG2865|consen 185 -----PSRMLRSKAAGEEAV---RDAFP----EATIIRPADIYGTEDRFLNYYASFWRKFGFLPLIGKGEKTVKQPVYVV 252 (391)
T ss_pred -----hHHHHHhhhhhHHHH---HhhCC----cceeechhhhcccchhHHHHHHHHHHhcCceeeecCCcceeeccEEEe
Confidence 223334444433211 11111 122333333322110 0 01144578
Q ss_pred hHHHHHHHHhhhcccccccceeeeCC
Q psy11190 219 AATAGIIQFIQSLGEAHNGGFFEYTG 244 (248)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~g~~~~~~g 244 (248)
+++++++..++++ ...|..|.+-|
T Consensus 253 DVaa~IvnAvkDp--~s~Gktye~vG 276 (391)
T KOG2865|consen 253 DVAAAIVNAVKDP--DSMGKTYEFVG 276 (391)
T ss_pred hHHHHHHHhccCc--cccCceeeecC
Confidence 8899999988885 56677776655
|
|
| >TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic | Back alignment and domain information |
|---|
Probab=98.19 E-value=7.7e-06 Score=71.97 Aligned_cols=106 Identities=13% Similarity=0.232 Sum_probs=69.7
Q ss_pred ceEEEecC---------------CCc-hhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCC
Q psy11190 2 KSILITGC---------------NRG-LGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDF 65 (248)
Q Consensus 2 k~~lVtGa---------------s~g-iG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 65 (248)
|++||||| ||| +|.++|++|..+| ++|+++.++.... ... ....+|+++.
T Consensus 186 ~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~G----a~V~~~~g~~~~~--------~~~--~~~~~~v~~~ 251 (390)
T TIGR00521 186 KRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRG----ADVTLITGPVSLL--------TPP--GVKSIKVSTA 251 (390)
T ss_pred ceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCC----CEEEEeCCCCccC--------CCC--CcEEEEeccH
Confidence 68999999 667 9999999999999 8999988765321 011 2356888887
Q ss_pred chhh-hhHHHHhhhhhcCCCccEEEeccccCCccccCCCCC--hhhhhheeeecchhhHHHHHHHh
Q psy11190 66 SKQQ-DVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLK--PEQMTDHFLVNVTAPLMLTKTML 128 (248)
Q Consensus 66 ~~~v-~~~~~~i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~--~~~~~~~~~~n~~~~~~l~~~~~ 128 (248)
++ . +.+++++ ++ ++|++|+|||+... .+....+ .+.....+.+|+.-+--+++.+-
T Consensus 252 ~~-~~~~~~~~~---~~--~~D~~i~~Aavsd~-~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~ 310 (390)
T TIGR00521 252 EE-MLEAALNEL---AK--DFDIFISAAAVADF-KPKTVFEGKIKKQGEELSLKLVKNPDIIAEVR 310 (390)
T ss_pred HH-HHHHHHHhh---cc--cCCEEEEccccccc-cccccccccccccCCceeEEEEeCcHHHHHHH
Confidence 77 5 5454332 33 49999999999865 4433211 11112345566666666655544
|
This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity. |
| >COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.13 E-value=3.6e-05 Score=64.16 Aligned_cols=187 Identities=21% Similarity=0.247 Sum_probs=113.7
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhcC
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVKD 82 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~~ 82 (248)
.+|||||||.+|++++++|.++| ++|.+..|+.+.+.... ..+.+...|+.+... . ...+.
T Consensus 2 ~ilV~GatG~~G~~~~~~L~~~~----~~v~~~~r~~~~~~~~~------~~v~~~~~d~~~~~~-l-------~~a~~- 62 (275)
T COG0702 2 KILVTGATGFVGGAVVRELLARG----HEVRAAVRNPEAAAALA------GGVEVVLGDLRDPKS-L-------VAGAK- 62 (275)
T ss_pred eEEEEecccchHHHHHHHHHhCC----CEEEEEEeCHHHHHhhc------CCcEEEEeccCCHhH-H-------HHHhc-
Confidence 58999999999999999999999 99999999998866654 578889999998877 2 22222
Q ss_pred CCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcccc
Q psy11190 83 QGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIED 162 (248)
Q Consensus 83 ~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~~ 162 (248)
++|.+++..+... ... .. .. ..........++.- . +..+++.+|...+..
T Consensus 63 -G~~~~~~i~~~~~-~~~-~~---~~------~~~~~~~~~a~~a~----~------------~~~~~~~~s~~~~~~-- 112 (275)
T COG0702 63 -GVDGVLLISGLLD-GSD-AF---RA------VQVTAVVRAAEAAG----A------------GVKHGVSLSVLGADA-- 112 (275)
T ss_pred -cccEEEEEecccc-ccc-ch---hH------HHHHHHHHHHHHhc----C------------CceEEEEeccCCCCC--
Confidence 4888888877543 111 00 00 11222233333322 1 244567776655432
Q ss_pred cCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcc----eecCCCC----------CCCCCchhhHHHHHHHHh
Q psy11190 163 NTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGW----VKTDMGG----------SNAPLEVGAATAGIIQFI 228 (248)
Q Consensus 163 ~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~----v~t~~~~----------~~~~~~~~~~~~~~~~~~ 228 (248)
.....|..+|...+...++....+. .++=+.+..+. +...+.. ...+...++.+..+...+
T Consensus 113 ---~~~~~~~~~~~~~e~~l~~sg~~~t--~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~a~~~~~~l 187 (275)
T COG0702 113 ---ASPSALARAKAAVEAALRSSGIPYT--TLRRAAFYLGAGAAFIEAAEAAGLPVIPRGIGRLSPIAVDDVAEALAAAL 187 (275)
T ss_pred ---CCccHHHHHHHHHHHHHHhcCCCeE--EEecCeeeeccchhHHHHHHhhCCceecCCCCceeeeEHHHHHHHHHHHh
Confidence 2346789999998887776664431 12212222211 1111111 122456788888887777
Q ss_pred hhcccccccceeeeCCe
Q psy11190 229 QSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 229 ~~~~~~~~g~~~~~~g~ 245 (248)
..+. ..+..|..-|+
T Consensus 188 ~~~~--~~~~~~~l~g~ 202 (275)
T COG0702 188 DAPA--TAGRTYELAGP 202 (275)
T ss_pred cCCc--ccCcEEEccCC
Confidence 6644 55666665554
|
|
| >PLN00106 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=98.06 E-value=4e-05 Score=65.87 Aligned_cols=153 Identities=12% Similarity=0.102 Sum_probs=93.5
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
+++.|||++|.+|..++..|+.++. ...+++++.+....+. .++..... .....++++.++ ..+.+.
T Consensus 19 ~KV~IiGaaG~VG~~~a~~l~~~~~--~~el~L~Di~~~~g~a-~Dl~~~~~--~~~i~~~~~~~d--------~~~~l~ 85 (323)
T PLN00106 19 FKVAVLGAAGGIGQPLSLLMKMNPL--VSELHLYDIANTPGVA-ADVSHINT--PAQVRGFLGDDQ--------LGDALK 85 (323)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC--CCEEEEEecCCCCeeE-chhhhCCc--CceEEEEeCCCC--------HHHHcC
Confidence 4699999999999999999997773 3589999987722111 22221111 112234433322 122222
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC---
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG--- 158 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~--- 158 (248)
+.|++|+.||.... .. ..++..+..|+.. ++.+.+.+.+.. +++.++++|.+..
T Consensus 86 --~aDiVVitAG~~~~----~g---~~R~dll~~N~~i----~~~i~~~i~~~~----------p~aivivvSNPvD~~~ 142 (323)
T PLN00106 86 --GADLVIIPAGVPRK----PG---MTRDDLFNINAGI----VKTLCEAVAKHC----------PNALVNIISNPVNSTV 142 (323)
T ss_pred --CCCEEEEeCCCCCC----CC---CCHHHHHHHHHHH----HHHHHHHHHHHC----------CCeEEEEeCCCccccH
Confidence 49999999997543 11 2344455555554 555555555542 5677888888875
Q ss_pred -ccc-----ccCCCCCccchhhHHHHHHHHHHHHhhcc
Q psy11190 159 -SIE-----DNTQGGFHPYRCSKAALNAATRSLSIDLK 190 (248)
Q Consensus 159 -~~~-----~~~~~~~~~y~~sK~a~~~~~~~la~e~~ 190 (248)
... ..+.++...|+.++.--..|-..++.++.
T Consensus 143 ~i~t~~~~~~s~~p~~~viG~~~LDs~Rl~~~lA~~lg 180 (323)
T PLN00106 143 PIAAEVLKKAGVYDPKKLFGVTTLDVVRANTFVAEKKG 180 (323)
T ss_pred HHHHHHHHHcCCCCcceEEEEecchHHHHHHHHHHHhC
Confidence 221 12235566889888666678888888875
|
|
| >PTZ00325 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.91 E-value=9.8e-05 Score=63.42 Aligned_cols=152 Identities=14% Similarity=0.143 Sum_probs=85.6
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|+++.|+|++|.+|..++..|+.++ ....+++++++....+. .++..... .....+.+|..+ . .+.+
T Consensus 8 ~~KI~IiGaaG~VGs~~a~~l~~~~--~~~elvL~Di~~~~g~a-~Dl~~~~~--~~~v~~~td~~~-~-------~~~l 74 (321)
T PTZ00325 8 MFKVAVLGAAGGIGQPLSLLLKQNP--HVSELSLYDIVGAPGVA-ADLSHIDT--PAKVTGYADGEL-W-------EKAL 74 (321)
T ss_pred CCEEEEECCCCHHHHHHHHHHhcCC--CCCEEEEEecCCCcccc-cchhhcCc--CceEEEecCCCc-h-------HHHh
Confidence 7789999999999999999999666 34789999994322221 12221111 223345555332 1 1112
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
. +.|+||+++|.... +.+.+...+..|+.. ++.+.+.|.+.+ .++.|+.+|.....+
T Consensus 75 ~--gaDvVVitaG~~~~-------~~~tR~dll~~N~~i----~~~i~~~i~~~~----------~~~iviv~SNPvdv~ 131 (321)
T PTZ00325 75 R--GADLVLICAGVPRK-------PGMTRDDLFNTNAPI----VRDLVAAVASSA----------PKAIVGIVSNPVNST 131 (321)
T ss_pred C--CCCEEEECCCCCCC-------CCCCHHHHHHHHHHH----HHHHHHHHHHHC----------CCeEEEEecCcHHHH
Confidence 2 49999999997532 112344445555544 455555555542 345555555554332
Q ss_pred cc---------cCCCCCccchhhHHHHH--HHHHHHHhhcc
Q psy11190 161 ED---------NTQGGFHPYRCSKAALN--AATRSLSIDLK 190 (248)
Q Consensus 161 ~~---------~~~~~~~~y~~sK~a~~--~~~~~la~e~~ 190 (248)
.. .+.+....|+.+ .|+ .|-..++..+.
T Consensus 132 ~~~~~~~~~~~sg~p~~~viG~g--~LDs~R~r~~la~~l~ 170 (321)
T PTZ00325 132 VPIAAETLKKAGVYDPRKLFGVT--TLDVVRARKFVAEALG 170 (321)
T ss_pred HHHHHhhhhhccCCChhheeech--hHHHHHHHHHHHHHhC
Confidence 21 112444567776 255 45666666653
|
|
| >PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases | Back alignment and domain information |
|---|
Probab=97.90 E-value=0.00014 Score=54.59 Aligned_cols=74 Identities=19% Similarity=0.335 Sum_probs=52.5
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|+++|.|+ ||.|++++..|++.|+ .+|+++.|+.++++++.+.. ....+. ..++.+..+ ...
T Consensus 13 ~~vlviGa-Gg~ar~v~~~L~~~g~---~~i~i~nRt~~ra~~l~~~~-~~~~~~--~~~~~~~~~-----------~~~ 74 (135)
T PF01488_consen 13 KRVLVIGA-GGAARAVAAALAALGA---KEITIVNRTPERAEALAEEF-GGVNIE--AIPLEDLEE-----------ALQ 74 (135)
T ss_dssp SEEEEESS-SHHHHHHHHHHHHTTS---SEEEEEESSHHHHHHHHHHH-TGCSEE--EEEGGGHCH-----------HHH
T ss_pred CEEEEECC-HHHHHHHHHHHHHcCC---CEEEEEECCHHHHHHHHHHc-Cccccc--eeeHHHHHH-----------HHh
Confidence 67999997 9999999999999995 56999999999988886555 122222 233433221 122
Q ss_pred CCCccEEEeccccC
Q psy11190 82 DQGLNVLVNNAGIA 95 (248)
Q Consensus 82 ~~~iD~lv~~ag~~ 95 (248)
..|+||++.+..
T Consensus 75 --~~DivI~aT~~~ 86 (135)
T PF01488_consen 75 --EADIVINATPSG 86 (135)
T ss_dssp --TESEEEE-SSTT
T ss_pred --hCCeEEEecCCC
Confidence 389999998754
|
Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C .... |
| >KOG2774|consensus | Back alignment and domain information |
|---|
Probab=97.88 E-value=0.00035 Score=56.48 Aligned_cols=198 Identities=17% Similarity=0.188 Sum_probs=119.5
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhcC
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVKD 82 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~~ 82 (248)
++||||+-|-+|..+|+.|-.+= ..-.|++.+--.... .....++ ++..|+-|..+ . ++..=+
T Consensus 46 rvLITG~LGQLG~~~A~LLR~~y--Gs~~VILSDI~KPp~----~V~~~GP---yIy~DILD~K~-L-------~eIVVn 108 (366)
T KOG2774|consen 46 RVLITGSLGQLGRGLASLLRYMY--GSECVILSDIVKPPA----NVTDVGP---YIYLDILDQKS-L-------EEIVVN 108 (366)
T ss_pred eEEEecchHHHhHHHHHHHHHHh--CCccEehhhccCCch----hhcccCC---chhhhhhcccc-H-------HHhhcc
Confidence 69999999999999998876432 235666655432221 1111122 45678888776 3 333322
Q ss_pred CCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcccc
Q psy11190 83 QGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIED 162 (248)
Q Consensus 83 ~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~~ 162 (248)
.++|-|||-.+...- +-....--...+|..|..++++.+.++ +-+ +|+-|.-|..++
T Consensus 109 ~RIdWL~HfSALLSA------vGE~NVpLA~~VNI~GvHNil~vAa~~----------------kL~-iFVPSTIGAFGP 165 (366)
T KOG2774|consen 109 KRIDWLVHFSALLSA------VGETNVPLALQVNIRGVHNILQVAAKH----------------KLK-VFVPSTIGAFGP 165 (366)
T ss_pred cccceeeeHHHHHHH------hcccCCceeeeecchhhhHHHHHHHHc----------------Cee-EeecccccccCC
Confidence 369999997665422 223345567889999999998887665 233 444444444433
Q ss_pred -cCC---------CCCccchhhHHHHHHHHHHHHhhccCCCeEEEEe-cCcceec--------CC---------------
Q psy11190 163 -NTQ---------GGFHPYRCSKAALNAATRSLSIDLKGDKIIATAM-HPGWVKT--------DM--------------- 208 (248)
Q Consensus 163 -~~~---------~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v-~PG~v~t--------~~--------------- 208 (248)
.+. .+-..|+.||...+.+-+.+...+ |+.+.++ .||.+.. +.
T Consensus 166 tSPRNPTPdltIQRPRTIYGVSKVHAEL~GEy~~hrF---g~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~t 242 (366)
T KOG2774|consen 166 TSPRNPTPDLTIQRPRTIYGVSKVHAELLGEYFNHRF---GVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKHT 242 (366)
T ss_pred CCCCCCCCCeeeecCceeechhHHHHHHHHHHHHhhc---CccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCcc
Confidence 211 234579999999998888877664 4555444 3555532 11
Q ss_pred --CC---CCCCCchhhHHHHHHHHhhhcccccccceeeeC
Q psy11190 209 --GG---SNAPLEVGAATAGIIQFIQSLGEAHNGGFFEYT 243 (248)
Q Consensus 209 --~~---~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 243 (248)
.+ ..+.+.-++|.+.++.++..+.....-..|.+.
T Consensus 243 Cylrpdtrlpmmy~~dc~~~~~~~~~a~~~~lkrr~ynvt 282 (366)
T KOG2774|consen 243 CYLRPDTRLPMMYDTDCMASVIQLLAADSQSLKRRTYNVT 282 (366)
T ss_pred cccCCCccCceeehHHHHHHHHHHHhCCHHHhhhheeeec
Confidence 00 012356788888888888776655444444443
|
|
| >PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase | Back alignment and domain information |
|---|
Probab=97.86 E-value=4.8e-05 Score=67.18 Aligned_cols=77 Identities=26% Similarity=0.383 Sum_probs=56.1
Q ss_pred EEEecCCCchhHHHHHHHHhCCCCCCc-eEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhcC
Q psy11190 4 ILITGCNRGLGLGMIKVLVGLGNNQPA-HIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVKD 82 (248)
Q Consensus 4 ~lVtGas~giG~~ia~~l~~~g~~~~~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~~ 82 (248)
++|.|+ |.+|+.+++.|++++. . +|++.+|+.++++++.+.. ...++..+++|+.|.++ +.++ +.
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~---~~~v~va~r~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~-l~~~-------~~- 66 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGP---FEEVTVADRNPEKAERLAEKL-LGDRVEAVQVDVNDPES-LAEL-------LR- 66 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTC---E-EEEEEESSHHHHHHHHT---TTTTEEEEE--TTTHHH-HHHH-------HT-
T ss_pred CEEEcC-cHHHHHHHHHHhcCCC---CCcEEEEECCHHHHHHHHhhc-cccceeEEEEecCCHHH-HHHH-------Hh-
Confidence 689999 9999999999999883 4 8999999999888774432 35689999999998776 3332 22
Q ss_pred CCccEEEeccccC
Q psy11190 83 QGLNVLVNNAGIA 95 (248)
Q Consensus 83 ~~iD~lv~~ag~~ 95 (248)
+.|+|||++|..
T Consensus 67 -~~dvVin~~gp~ 78 (386)
T PF03435_consen 67 -GCDVVINCAGPF 78 (386)
T ss_dssp -TSSEEEE-SSGG
T ss_pred -cCCEEEECCccc
Confidence 379999999865
|
Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A. |
| >KOG1372|consensus | Back alignment and domain information |
|---|
Probab=97.82 E-value=3.7e-05 Score=62.45 Aligned_cols=173 Identities=16% Similarity=0.081 Sum_probs=106.3
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH-HHHHh------hcCCceeEEeeccCCchhhhhHH
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL-LALAQ------QHSNLHVIELDVTDFSKQQDVLF 73 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~-~~~~~------~~~~~~~~~~D~~~~~~~v~~~~ 73 (248)
+|++||||-+|--|..+++-|+.+| +.|..+-|....-+.. .+.+- .+........|++|... ..+++
T Consensus 28 rkvALITGItGQDGSYLaEfLL~Kg----YeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~-L~k~I 102 (376)
T KOG1372|consen 28 RKVALITGITGQDGSYLAEFLLSKG----YEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSC-LIKLI 102 (376)
T ss_pred ceEEEEecccCCCchHHHHHHHhCC----ceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHH-HHHHH
Confidence 3689999999999999999999999 8999887765543332 22221 13456788899999877 55554
Q ss_pred HHhhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEe
Q psy11190 74 KDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNV 153 (248)
Q Consensus 74 ~~i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~v 153 (248)
..|+ ++-+.|.|+.+-. + ++.+--+.+-++...|++.++.+.-.--.. .+-++--.
T Consensus 103 ~~ik-------PtEiYnLaAQSHV-k----vSFdlpeYTAeVdavGtLRlLdAi~~c~l~------------~~VrfYQA 158 (376)
T KOG1372|consen 103 STIK-------PTEVYNLAAQSHV-K----VSFDLPEYTAEVDAVGTLRLLDAIRACRLT------------EKVRFYQA 158 (376)
T ss_pred hccC-------chhhhhhhhhcce-E----EEeecccceeeccchhhhhHHHHHHhcCcc------------cceeEEec
Confidence 4443 7888888886643 2 333444566677888988877664332111 12333333
Q ss_pred ecCC--Ccccc------cCCCCCccchhhHHHHHHHHHHHHhhc---cCCCeEEEEecCc
Q psy11190 154 SSIM--GSIED------NTQGGFHPYRCSKAALNAATRSLSIDL---KGDKIIATAMHPG 202 (248)
Q Consensus 154 ss~~--~~~~~------~~~~~~~~y~~sK~a~~~~~~~la~e~---~~~~i~v~~v~PG 202 (248)
|+.. |.... .|..+-+.|+++|....=++-..+..+ +=.||-+|.=+|-
T Consensus 159 stSElyGkv~e~PQsE~TPFyPRSPYa~aKmy~~WivvNyREAYnmfAcNGILFNHESPR 218 (376)
T KOG1372|consen 159 STSELYGKVQEIPQSETTPFYPRSPYAAAKMYGYWIVVNYREAYNMFACNGILFNHESPR 218 (376)
T ss_pred ccHhhcccccCCCcccCCCCCCCChhHHhhhhheEEEEEhHHhhcceeeccEeecCCCCc
Confidence 3222 21111 122345679999976543333333322 2357777777765
|
|
| >PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis [] | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.0013 Score=49.65 Aligned_cols=118 Identities=21% Similarity=0.279 Sum_probs=74.0
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH-HHHHhh--cCCceeEEeeccCCchhhhhHHHHhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL-LALAQQ--HSNLHVIELDVTDFSKQQDVLFKDIS 77 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~-~~~~~~--~~~~~~~~~D~~~~~~~v~~~~~~i~ 77 (248)
|| +.|+|++|.+|..++..|...+ ....+++.+++.+.++.. .++... ...... .....+.+. ++
T Consensus 1 ~K-V~IiGa~G~VG~~~a~~l~~~~--l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~-~i~~~~~~~--------~~ 68 (141)
T PF00056_consen 1 MK-VAIIGAAGNVGSTLALLLAQQG--LADEIVLIDINEDKAEGEALDLSHASAPLPSPV-RITSGDYEA--------LK 68 (141)
T ss_dssp SE-EEEESTTSHHHHHHHHHHHHTT--TSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEE-EEEESSGGG--------GT
T ss_pred CE-EEEECCCChHHHHHHHHHHhCC--CCCceEEeccCcccceeeehhhhhhhhhccccc-ccccccccc--------cc
Confidence 44 7788999999999999999998 568899999998766554 232221 111111 111122222 22
Q ss_pred hhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCC
Q psy11190 78 DVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIM 157 (248)
Q Consensus 78 ~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~ 157 (248)
..|++|..||.... ...+..++ + .....+.+.+.+.+.+.. +++.++.+|.+.
T Consensus 69 ------~aDivvitag~~~~----~g~sR~~l---l----~~N~~i~~~~~~~i~~~~----------p~~~vivvtNPv 121 (141)
T PF00056_consen 69 ------DADIVVITAGVPRK----PGMSRLDL---L----EANAKIVKEIAKKIAKYA----------PDAIVIVVTNPV 121 (141)
T ss_dssp ------TESEEEETTSTSSS----TTSSHHHH---H----HHHHHHHHHHHHHHHHHS----------TTSEEEE-SSSH
T ss_pred ------cccEEEEecccccc----ccccHHHH---H----HHhHhHHHHHHHHHHHhC----------CccEEEEeCCcH
Confidence 38999999997532 12233332 2 245567777777777753 578888887644
|
L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C .... |
| >KOG4039|consensus | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.0007 Score=52.44 Aligned_cols=157 Identities=18% Similarity=0.175 Sum_probs=100.1
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|+.++|.||||-.|..+.+.+++.+ .=..|+++.|....-.+ ....+.-...|.+..++ +...+.
T Consensus 18 ~~s~fvlGAtG~~G~~llk~~~E~~--~FSKV~~i~RR~~~d~a------t~k~v~q~~vDf~Kl~~----~a~~~q--- 82 (238)
T KOG4039|consen 18 NMSGFVLGATGLCGGGLLKHAQEAP--QFSKVYAILRRELPDPA------TDKVVAQVEVDFSKLSQ----LATNEQ--- 82 (238)
T ss_pred ccceEEEeccccccHHHHHHHHhcc--cceeEEEEEeccCCCcc------ccceeeeEEechHHHHH----HHhhhc---
Confidence 4679999999999999999999988 45789998886421111 13355566777765444 222222
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
++|+++|+-|.... + ...+..+.+.---.+.+.+.+ ++ ++--.++.+||..++-
T Consensus 83 ---g~dV~FcaLgTTRg-k-------aGadgfykvDhDyvl~~A~~A----Ke-----------~Gck~fvLvSS~GAd~ 136 (238)
T KOG4039|consen 83 ---GPDVLFCALGTTRG-K-------AGADGFYKVDHDYVLQLAQAA----KE-----------KGCKTFVLVSSAGADP 136 (238)
T ss_pred ---CCceEEEeeccccc-c-------cccCceEeechHHHHHHHHHH----Hh-----------CCCeEEEEEeccCCCc
Confidence 49999999886532 1 112333333322223333332 22 1455789999977654
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCC
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMG 209 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~ 209 (248)
.+ ...|--.|.-++.=+..|..+ ++..+.||++....+
T Consensus 137 sS-----rFlY~k~KGEvE~~v~eL~F~------~~~i~RPG~ll~~R~ 174 (238)
T KOG4039|consen 137 SS-----RFLYMKMKGEVERDVIELDFK------HIIILRPGPLLGERT 174 (238)
T ss_pred cc-----ceeeeeccchhhhhhhhcccc------EEEEecCcceecccc
Confidence 33 356888899888766655543 788899999966554
|
|
| >cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.00057 Score=58.97 Aligned_cols=120 Identities=13% Similarity=0.141 Sum_probs=70.7
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCC---CCceEEEeecCchh--HHHHHHHHhhcCCceeEEeeccCCc-----hhhhhH
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNN---QPAHIFATCRNKDK--AVELLALAQQHSNLHVIELDVTDFS-----KQQDVL 72 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~---~~~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~-----~~v~~~ 72 (248)
+++|||++|.+|..++..|+..+.- .+..|++.+++... ++. ...|+.|.. . +. .
T Consensus 4 kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g-------------~~~Dl~d~~~~~~~~-~~-~ 68 (325)
T cd01336 4 RVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEG-------------VVMELQDCAFPLLKS-VV-A 68 (325)
T ss_pred EEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccc-------------eeeehhhccccccCC-ce-e
Confidence 5899999999999999999986531 11489999996532 211 223333211 0 00 0
Q ss_pred HHHhhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEE
Q psy11190 73 FKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVN 152 (248)
Q Consensus 73 ~~~i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~ 152 (248)
.....+.+. +.|+|||.||.... ...+.++ .+. ....+.+.+.+.+.+... +++.+++
T Consensus 69 ~~~~~~~l~--~aDiVI~tAG~~~~----~~~~R~~---l~~----~N~~i~~~i~~~i~~~~~---------~~~iiiv 126 (325)
T cd01336 69 TTDPEEAFK--DVDVAILVGAMPRK----EGMERKD---LLK----ANVKIFKEQGEALDKYAK---------KNVKVLV 126 (325)
T ss_pred cCCHHHHhC--CCCEEEEeCCcCCC----CCCCHHH---HHH----HHHHHHHHHHHHHHHhCC---------CCeEEEE
Confidence 011222222 49999999997643 1223333 222 345566777777776521 4778888
Q ss_pred eecCCCc
Q psy11190 153 VSSIMGS 159 (248)
Q Consensus 153 vss~~~~ 159 (248)
+|++...
T Consensus 127 vsNPvD~ 133 (325)
T cd01336 127 VGNPANT 133 (325)
T ss_pred ecCcHHH
Confidence 8876533
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >TIGR00507 aroE shikimate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00032 Score=58.95 Aligned_cols=44 Identities=25% Similarity=0.295 Sum_probs=37.9
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQ 50 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~ 50 (248)
|+++|+|+ ||+|++++..|++.| ++|.+++|+.++++++.+...
T Consensus 118 k~vliiGa-Gg~g~aia~~L~~~g----~~v~v~~R~~~~~~~la~~~~ 161 (270)
T TIGR00507 118 QRVLIIGA-GGAARAVALPLLKAD----CNVIIANRTVSKAEELAERFQ 161 (270)
T ss_pred CEEEEEcC-cHHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHHh
Confidence 67999998 699999999999999 899999999888877755443
|
This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain. |
| >PRK09620 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.00033 Score=57.30 Aligned_cols=81 Identities=15% Similarity=0.192 Sum_probs=49.1
Q ss_pred ceEEEecCC----------------CchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCC
Q psy11190 2 KSILITGCN----------------RGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDF 65 (248)
Q Consensus 2 k~~lVtGas----------------~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 65 (248)
|++|||+|. |-+|.++|++|+++| +.|+++++....... .. ...+.+.. +..
T Consensus 4 k~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~G----a~V~li~g~~~~~~~--~~---~~~~~~~~--V~s- 71 (229)
T PRK09620 4 KKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKG----AHVIYLHGYFAEKPN--DI---NNQLELHP--FEG- 71 (229)
T ss_pred CEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCC----CeEEEEeCCCcCCCc--cc---CCceeEEE--Eec-
Confidence 679999886 999999999999999 899988764321100 00 01222222 111
Q ss_pred chhhhhHHHHhhhhhcCCCccEEEeccccCCc
Q psy11190 66 SKQQDVLFKDISDVVKDQGLNVLVNNAGIAAK 97 (248)
Q Consensus 66 ~~~v~~~~~~i~~~~~~~~iD~lv~~ag~~~~ 97 (248)
...+.+.+.+.+...++|++||+|+....
T Consensus 72 ---~~d~~~~l~~~~~~~~~D~VIH~AAvsD~ 100 (229)
T PRK09620 72 ---IIDLQDKMKSIITHEKVDAVIMAAAGSDW 100 (229)
T ss_pred ---HHHHHHHHHHHhcccCCCEEEECccccce
Confidence 11222333443332248999999998754
|
|
| >PRK14982 acyl-ACP reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.00053 Score=59.20 Aligned_cols=71 Identities=15% Similarity=0.272 Sum_probs=50.3
Q ss_pred ceEEEecCCCchhHHHHHHHHhC-CCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGL-GNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~-g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|+++||||+|.||..++++|+++ |. ..++++.|+.++++++.+... ..|+.+ +.+.+
T Consensus 156 k~VLVtGAtG~IGs~lar~L~~~~gv---~~lilv~R~~~rl~~La~el~--------~~~i~~-----------l~~~l 213 (340)
T PRK14982 156 ATVAVVGATGDIGSAVCRWLDAKTGV---AELLLVARQQERLQELQAELG--------GGKILS-----------LEEAL 213 (340)
T ss_pred CEEEEEccChHHHHHHHHHHHhhCCC---CEEEEEcCCHHHHHHHHHHhc--------cccHHh-----------HHHHH
Confidence 78999999999999999999864 53 689999999887776643221 122221 12223
Q ss_pred cCCCccEEEeccccCC
Q psy11190 81 KDQGLNVLVNNAGIAA 96 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~ 96 (248)
. ..|++|+.++...
T Consensus 214 ~--~aDiVv~~ts~~~ 227 (340)
T PRK14982 214 P--EADIVVWVASMPK 227 (340)
T ss_pred c--cCCEEEECCcCCc
Confidence 3 3899999998643
|
|
| >cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR) | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.0021 Score=54.38 Aligned_cols=78 Identities=15% Similarity=0.222 Sum_probs=52.5
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
++++|+|+++++|.++++.+...| ..|++++++.++.+.+.+. + +. ..+|..+.+. .+.+ .+...
T Consensus 146 ~~vlI~g~~~~~g~~~~~~a~~~g----~~v~~~~~~~~~~~~~~~~---g--~~-~~~~~~~~~~-~~~~----~~~~~ 210 (325)
T cd08253 146 ETVLVHGGSGAVGHAAVQLARWAG----ARVIATASSAEGAELVRQA---G--AD-AVFNYRAEDL-ADRI----LAATA 210 (325)
T ss_pred CEEEEEcCCchHHHHHHHHHHHcC----CEEEEEeCCHHHHHHHHHc---C--CC-EEEeCCCcCH-HHHH----HHHcC
Confidence 579999999999999999999999 8899999987765554322 1 11 1244444433 3333 22222
Q ss_pred CCCccEEEecccc
Q psy11190 82 DQGLNVLVNNAGI 94 (248)
Q Consensus 82 ~~~iD~lv~~ag~ 94 (248)
..++|++++++|.
T Consensus 211 ~~~~d~vi~~~~~ 223 (325)
T cd08253 211 GQGVDVIIEVLAN 223 (325)
T ss_pred CCceEEEEECCch
Confidence 2259999998863
|
Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts |
| >cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.0025 Score=54.93 Aligned_cols=159 Identities=9% Similarity=0.000 Sum_probs=96.5
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCc-----eEEEeecCchh--HHHH-HHHHhhc-CCceeEEeeccCCchhhhhH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPA-----HIFATCRNKDK--AVEL-LALAQQH-SNLHVIELDVTDFSKQQDVL 72 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~-----~V~~~~r~~~~--~~~~-~~~~~~~-~~~~~~~~D~~~~~~~v~~~ 72 (248)
+.+.|+|++|.+|..++..|+.+|. .. .+++.+.+++. ++.. .++.... .... .+.++. ..
T Consensus 3 ~KV~IiGa~G~VG~~~a~~l~~~~~--~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~--~~~i~~-~~----- 72 (322)
T cd01338 3 VRVAVTGAAGQIGYSLLFRIASGEM--FGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLA--EIVITD-DP----- 72 (322)
T ss_pred eEEEEECCCcHHHHHHHHHHHhccc--cCCCCceEEEEEecCCcccccceeehhhhhccccccC--ceEEec-Cc-----
Confidence 4689999999999999999998883 23 69999985432 2322 2222110 0000 011110 00
Q ss_pred HHHhhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEE
Q psy11190 73 FKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVN 152 (248)
Q Consensus 73 ~~~i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~ 152 (248)
.+.+. +.|++|.+||.... + ..+..++ +....-+.+.+.+.+.+... +++.+++
T Consensus 73 ----~~~~~--daDivvitaG~~~k--~--g~tR~dl-------l~~N~~i~~~i~~~i~~~~~---------~~~iiiv 126 (322)
T cd01338 73 ----NVAFK--DADWALLVGAKPRG--P--GMERADL-------LKANGKIFTAQGKALNDVAS---------RDVKVLV 126 (322)
T ss_pred ----HHHhC--CCCEEEEeCCCCCC--C--CCcHHHH-------HHHHHHHHHHHHHHHHhhCC---------CCeEEEE
Confidence 11122 38999999997532 1 2233332 22455677888888877531 2788899
Q ss_pred eecCCCcccc-----c-CCCCCccchhhHHHHHHHHHHHHhhcc--CCCeEE
Q psy11190 153 VSSIMGSIED-----N-TQGGFHPYRCSKAALNAATRSLSIDLK--GDKIIA 196 (248)
Q Consensus 153 vss~~~~~~~-----~-~~~~~~~y~~sK~a~~~~~~~la~e~~--~~~i~v 196 (248)
+|.+...+.. . ..+....|+.++.--..|...+++.+. +..|+.
T Consensus 127 vsNPvD~~t~~~~k~sg~~p~~~ViG~t~LDs~Rl~~~la~~lgv~~~~v~~ 178 (322)
T cd01338 127 VGNPCNTNALIAMKNAPDIPPDNFTAMTRLDHNRAKSQLAKKAGVPVTDVKN 178 (322)
T ss_pred ecCcHHHHHHHHHHHcCCCChHheEEehHHHHHHHHHHHHHHhCcChhHeEE
Confidence 9876633321 1 134455899999999999999998875 344554
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >KOG2733|consensus | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00044 Score=59.09 Aligned_cols=79 Identities=23% Similarity=0.239 Sum_probs=61.9
Q ss_pred EEEecCCCchhHHHHHHHHh----CCCCCCceEEEeecCchhHHHHHHHHhh-c----CCceeEEeeccCCchhhhhHHH
Q psy11190 4 ILITGCNRGLGLGMIKVLVG----LGNNQPAHIFATCRNKDKAVELLALAQQ-H----SNLHVIELDVTDFSKQQDVLFK 74 (248)
Q Consensus 4 ~lVtGas~giG~~ia~~l~~----~g~~~~~~V~~~~r~~~~~~~~~~~~~~-~----~~~~~~~~D~~~~~~~v~~~~~ 74 (248)
++|.||||.-|..+++++.. .| ....+.+||++++++..+.... . +...++.+|.+|+++ ..++++
T Consensus 8 vVIyGASGfTG~yivee~v~~~~~~~----~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~S-l~emak 82 (423)
T KOG2733|consen 8 VVIYGASGFTGKYIVEEAVSSQVFEG----LSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEAS-LDEMAK 82 (423)
T ss_pred EEEEccccccceeeHHHHhhhhcccC----ceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHH-HHHHHh
Confidence 78999999999999999999 66 8999999999999987544433 2 233488899999998 444422
Q ss_pred HhhhhhcCCCccEEEeccccCC
Q psy11190 75 DISDVVKDQGLNVLVNNAGIAA 96 (248)
Q Consensus 75 ~i~~~~~~~~iD~lv~~ag~~~ 96 (248)
...+|+||+|...
T Consensus 83 ---------~~~vivN~vGPyR 95 (423)
T KOG2733|consen 83 ---------QARVIVNCVGPYR 95 (423)
T ss_pred ---------hhEEEEeccccce
Confidence 2568999998653
|
|
| >PRK00258 aroE shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.00065 Score=57.35 Aligned_cols=44 Identities=39% Similarity=0.449 Sum_probs=38.1
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALA 49 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~ 49 (248)
|+++|+|+ ||+|++++..|++.|. .+|++++|+.++++++.+..
T Consensus 124 k~vlVlGa-Gg~a~ai~~aL~~~g~---~~V~v~~R~~~~a~~l~~~~ 167 (278)
T PRK00258 124 KRILILGA-GGAARAVILPLLDLGV---AEITIVNRTVERAEELAKLF 167 (278)
T ss_pred CEEEEEcC-cHHHHHHHHHHHHcCC---CEEEEEeCCHHHHHHHHHHh
Confidence 67999997 8999999999999995 68999999998888775443
|
|
| >cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.0027 Score=54.38 Aligned_cols=116 Identities=18% Similarity=0.228 Sum_probs=73.3
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHH-HHhhc---C-CceeEEeeccCCchhhhhHHHHhh
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQH---S-NLHVIELDVTDFSKQQDVLFKDIS 77 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~-~~~~~---~-~~~~~~~D~~~~~~~v~~~~~~i~ 77 (248)
.+.|.|+ |++|..++..|+.+|. ...|++++++.+.++.... +.... . ...+. ..+.+. +
T Consensus 2 kI~IIGa-G~vG~~~a~~l~~~g~--~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~---~~~~~~--------l- 66 (306)
T cd05291 2 KVVIIGA-GHVGSSFAYSLVNQGI--ADELVLIDINEEKAEGEALDLEDALAFLPSPVKIK---AGDYSD--------C- 66 (306)
T ss_pred EEEEECC-CHHHHHHHHHHHhcCC--CCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEE---cCCHHH--------h-
Confidence 4677785 8999999999999884 2489999999888776633 32211 1 11111 111111 1
Q ss_pred hhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCC
Q psy11190 78 DVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIM 157 (248)
Q Consensus 78 ~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~ 157 (248)
. ..|++|+++|.... + ..+..++ +.....+.+...+.+.+.. +++.++++|.+.
T Consensus 67 ---~--~aDIVIitag~~~~--~--g~~R~dl-------l~~N~~i~~~~~~~i~~~~----------~~~~vivvsNP~ 120 (306)
T cd05291 67 ---K--DADIVVITAGAPQK--P--GETRLDL-------LEKNAKIMKSIVPKIKASG----------FDGIFLVASNPV 120 (306)
T ss_pred ---C--CCCEEEEccCCCCC--C--CCCHHHH-------HHHHHHHHHHHHHHHHHhC----------CCeEEEEecChH
Confidence 2 38999999997532 1 2233332 2245667777777777753 578899998766
Q ss_pred Cc
Q psy11190 158 GS 159 (248)
Q Consensus 158 ~~ 159 (248)
..
T Consensus 121 d~ 122 (306)
T cd05291 121 DV 122 (306)
T ss_pred HH
Confidence 43
|
L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine |
| >cd00704 MDH Malate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.0035 Score=54.06 Aligned_cols=124 Identities=15% Similarity=0.183 Sum_probs=74.2
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCC---CCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchh-hh--hHHHHh
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNN---QPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQ-QD--VLFKDI 76 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~---~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~-v~--~~~~~i 76 (248)
.+.||||+|.+|..++..|+..|.- ....+++.+++... +.......|+.+.... .. ......
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~-----------~~~~g~~~Dl~d~~~~~~~~~~i~~~~ 70 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAM-----------KALEGVVMELQDCAFPLLKGVVITTDP 70 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCcc-----------CccceeeeehhhhcccccCCcEEecCh
Confidence 4789999999999999999987730 00149999987620 1223345555554210 00 000112
Q ss_pred hhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecC
Q psy11190 77 SDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSI 156 (248)
Q Consensus 77 ~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~ 156 (248)
.+.+. +.|++|+.||.... + ..+..++ +.....+.+.+.+.+.+... +++.++++|.+
T Consensus 71 ~~~~~--~aDiVVitAG~~~~--~--g~tR~dl-------l~~N~~i~~~i~~~i~~~~~---------~~~iiivvsNP 128 (323)
T cd00704 71 EEAFK--DVDVAILVGAFPRK--P--GMERADL-------LRKNAKIFKEQGEALNKVAK---------PTVKVLVVGNP 128 (323)
T ss_pred HHHhC--CCCEEEEeCCCCCC--c--CCcHHHH-------HHHhHHHHHHHHHHHHHhCC---------CCeEEEEeCCc
Confidence 23333 49999999997543 1 2233332 22456678888888877521 47888888876
Q ss_pred CCc
Q psy11190 157 MGS 159 (248)
Q Consensus 157 ~~~ 159 (248)
...
T Consensus 129 vD~ 131 (323)
T cd00704 129 ANT 131 (323)
T ss_pred HHH
Confidence 643
|
Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.0029 Score=54.60 Aligned_cols=124 Identities=12% Similarity=0.127 Sum_probs=75.0
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCC---CCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhh-hHH--HHh
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNN---QPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQD-VLF--KDI 76 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~---~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~-~~~--~~i 76 (248)
.+.|+|++|.+|..++..|+.++.- ....+++.+++++. ........|+++...... ... ...
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~-----------~~a~g~~~Dl~d~~~~~~~~~~~~~~~ 69 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAM-----------KVLEGVVMELMDCAFPLLDGVVPTHDP 69 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcc-----------cccceeEeehhcccchhcCceeccCCh
Confidence 3789999999999999999987730 00158999986542 123445666666542010 000 011
Q ss_pred hhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecC
Q psy11190 77 SDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSI 156 (248)
Q Consensus 77 ~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~ 156 (248)
.+.+. +.|++|+.||.... ...+ +...+ .....+.+.+.+.+.+... +++.++++|.+
T Consensus 70 ~~~~~--~aDiVVitAG~~~~----~~~t---r~~ll----~~N~~i~k~i~~~i~~~~~---------~~~iiivvsNP 127 (324)
T TIGR01758 70 AVAFT--DVDVAILVGAFPRK----EGME---RRDLL----SKNVKIFKEQGRALDKLAK---------KDCKVLVVGNP 127 (324)
T ss_pred HHHhC--CCCEEEEcCCCCCC----CCCc---HHHHH----HHHHHHHHHHHHHHHhhCC---------CCeEEEEeCCc
Confidence 22222 49999999997533 1122 33333 3556677888888777511 47888888876
Q ss_pred CCc
Q psy11190 157 MGS 159 (248)
Q Consensus 157 ~~~ 159 (248)
...
T Consensus 128 vDv 130 (324)
T TIGR01758 128 ANT 130 (324)
T ss_pred HHH
Confidence 643
|
This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography |
| >cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.0019 Score=49.21 Aligned_cols=74 Identities=23% Similarity=0.333 Sum_probs=51.0
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
++++|+|+ |++|.++++.|.+.|. ..|++++|+.++.+++.+...... +..+.++.++ . ..
T Consensus 20 ~~i~iiG~-G~~g~~~a~~l~~~g~---~~v~v~~r~~~~~~~~~~~~~~~~----~~~~~~~~~~-~----------~~ 80 (155)
T cd01065 20 KKVLILGA-GGAARAVAYALAELGA---AKIVIVNRTLEKAKALAERFGELG----IAIAYLDLEE-L----------LA 80 (155)
T ss_pred CEEEEECC-cHHHHHHHHHHHHCCC---CEEEEEcCCHHHHHHHHHHHhhcc----cceeecchhh-c----------cc
Confidence 57899998 8999999999998852 789999999888776644332111 2233443332 1 12
Q ss_pred CCCccEEEeccccCC
Q psy11190 82 DQGLNVLVNNAGIAA 96 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~ 96 (248)
..|+||++.+...
T Consensus 81 --~~Dvvi~~~~~~~ 93 (155)
T cd01065 81 --EADLIINTTPVGM 93 (155)
T ss_pred --cCCEEEeCcCCCC
Confidence 4999999987643
|
Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann |
| >PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.0013 Score=59.33 Aligned_cols=73 Identities=23% Similarity=0.399 Sum_probs=51.6
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCc-hhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNK-DKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|+++|+|+++ +|.++|+.|+++| +.|++.+++. +..++..+.+. ...+.++..|..+. ..
T Consensus 6 k~v~iiG~g~-~G~~~A~~l~~~G----~~V~~~d~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~-------------~~ 66 (450)
T PRK14106 6 KKVLVVGAGV-SGLALAKFLKKLG----AKVILTDEKEEDQLKEALEELG-ELGIELVLGEYPEE-------------FL 66 (450)
T ss_pred CEEEEECCCH-HHHHHHHHHHHCC----CEEEEEeCCchHHHHHHHHHHH-hcCCEEEeCCcchh-------------Hh
Confidence 6899999888 9999999999999 8999999975 33333322222 12355666666541 11
Q ss_pred cCCCccEEEeccccC
Q psy11190 81 KDQGLNVLVNNAGIA 95 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~ 95 (248)
+ ++|+||+++|..
T Consensus 67 ~--~~d~vv~~~g~~ 79 (450)
T PRK14106 67 E--GVDLVVVSPGVP 79 (450)
T ss_pred h--cCCEEEECCCCC
Confidence 2 489999999874
|
|
| >PRK00066 ldh L-lactate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.012 Score=50.57 Aligned_cols=120 Identities=16% Similarity=0.150 Sum_probs=73.8
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH-HHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL-LALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
+.+.|+|+ |.+|..++..|+.+|. ...+++++++.+.++.. .++....+... ...+.. .. . +.++
T Consensus 7 ~ki~iiGa-G~vG~~~a~~l~~~~~--~~el~L~D~~~~~~~g~~~Dl~~~~~~~~--~~~i~~-~~-~----~~~~--- 72 (315)
T PRK00066 7 NKVVLVGD-GAVGSSYAYALVNQGI--ADELVIIDINKEKAEGDAMDLSHAVPFTS--PTKIYA-GD-Y----SDCK--- 72 (315)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCC--CCEEEEEeCCCchhHHHHHHHHhhccccC--CeEEEe-CC-H----HHhC---
Confidence 36889998 9999999999999883 34899999998876655 33332211000 111111 11 1 1122
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
+.|++|..||.... + ..+..++ +.....+.+.+.+.+.+.. +++.++++|.+...
T Consensus 73 ---~adivIitag~~~k--~--g~~R~dl-------l~~N~~i~~~i~~~i~~~~----------~~~~vivvsNP~d~ 127 (315)
T PRK00066 73 ---DADLVVITAGAPQK--P--GETRLDL-------VEKNLKIFKSIVGEVMASG----------FDGIFLVASNPVDI 127 (315)
T ss_pred ---CCCEEEEecCCCCC--C--CCCHHHH-------HHHHHHHHHHHHHHHHHhC----------CCeEEEEccCcHHH
Confidence 38999999997532 1 2233332 2234556677677776653 57889999876643
|
|
| >PRK05086 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0058 Score=52.48 Aligned_cols=119 Identities=17% Similarity=0.197 Sum_probs=65.9
Q ss_pred eEEEecCCCchhHHHHHHHHh-CCCCCCceEEEeecCchhHHHH-HHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 3 SILITGCNRGLGLGMIKVLVG-LGNNQPAHIFATCRNKDKAVEL-LALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~-~g~~~~~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
.++|.||+|++|.+++..|.. .+ .+..+++.++++. .+.. .++.. ......+.. .+.++ +.+.+
T Consensus 2 KI~IIGAsG~VG~aia~~l~~~~~--~~~el~L~d~~~~-~~g~alDl~~-~~~~~~i~~--~~~~d--------~~~~l 67 (312)
T PRK05086 2 KVAVLGAAGGIGQALALLLKTQLP--AGSELSLYDIAPV-TPGVAVDLSH-IPTAVKIKG--FSGED--------PTPAL 67 (312)
T ss_pred EEEEECCCCHHHHHHHHHHHcCCC--CccEEEEEecCCC-Ccceehhhhc-CCCCceEEE--eCCCC--------HHHHc
Confidence 488999999999999998854 33 2367888898743 2111 12211 111112222 11111 11222
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
. +.|++|.++|.... + ..+..+ .+..| ..+++.+.+.|.+.. +++.++++|.++.
T Consensus 68 ~--~~DiVIitaG~~~~--~--~~~R~d---ll~~N----~~i~~~ii~~i~~~~----------~~~ivivvsNP~D 122 (312)
T PRK05086 68 E--GADVVLISAGVARK--P--GMDRSD---LFNVN----AGIVKNLVEKVAKTC----------PKACIGIITNPVN 122 (312)
T ss_pred C--CCCEEEEcCCCCCC--C--CCCHHH---HHHHH----HHHHHHHHHHHHHhC----------CCeEEEEccCchH
Confidence 2 39999999997532 1 122222 22233 345566666666542 5677888888773
|
|
| >cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.012 Score=50.28 Aligned_cols=78 Identities=22% Similarity=0.336 Sum_probs=52.5
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
++++|+|+++++|.++++.+...| .+|++++++.++.+.+... +. . ...|..+.+. .+.+.+.. .
T Consensus 168 ~~vlI~g~~~~iG~~~~~~~~~~g----~~v~~~~~~~~~~~~~~~~---~~--~-~~~~~~~~~~-~~~~~~~~----~ 232 (342)
T cd08266 168 ETVLVHGAGSGVGSAAIQIAKLFG----ATVIATAGSEDKLERAKEL---GA--D-YVIDYRKEDF-VREVRELT----G 232 (342)
T ss_pred CEEEEECCCchHHHHHHHHHHHcC----CEEEEEeCCHHHHHHHHHc---CC--C-eEEecCChHH-HHHHHHHh----C
Confidence 479999999999999999999999 8899999887765544221 11 1 1235444333 34333222 2
Q ss_pred CCCccEEEecccc
Q psy11190 82 DQGLNVLVNNAGI 94 (248)
Q Consensus 82 ~~~iD~lv~~ag~ 94 (248)
..++|++++++|.
T Consensus 233 ~~~~d~~i~~~g~ 245 (342)
T cd08266 233 KRGVDVVVEHVGA 245 (342)
T ss_pred CCCCcEEEECCcH
Confidence 2259999999873
|
This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone |
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.013 Score=62.91 Aligned_cols=176 Identities=14% Similarity=0.141 Sum_probs=102.5
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhcC
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVKD 82 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~~ 82 (248)
.++|+..+++++.+++.+|.++| +.|+++.....- .. ........+..+...--+... ++.+++.+.+..+
T Consensus 1757 ~~~v~~d~~~~~~~L~~~L~~~G----~~v~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~- 1827 (2582)
T TIGR02813 1757 NALVIDDDGHNAGVLAEKLIAAG----WQVAVVRSPWVV-SH--SASPLASAIASVTLGTIDDTS-IEAVIKDIEEKTA- 1827 (2582)
T ss_pred eeEEEcCCcchHHHHHHHHHhCC----CeEEEeeccccc-cc--cccccccccccccccccchHH-HHHHHHhhhcccc-
Confidence 57788889999999999999999 778776422110 00 000001122222333333344 6666666655444
Q ss_pred CCccEEEeccccCCcc-ccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 83 QGLNVLVNNAGIAAKF-TRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 83 ~~iD~lv~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
.++.+||..+..... .........+..+ ..+...|.+.|.+.+.+... +++.++.++...|..+
T Consensus 1828 -~~~g~i~l~~~~~~~~~~~~~~~~~~~~~---~~l~~~f~~ak~~~~~l~~~-----------~~~~~~~vsr~~G~~g 1892 (2582)
T TIGR02813 1828 -QIDGFIHLQPQHKSVADKVDAIELPEAAK---QSLMLAFLFAKLLNVKLATN-----------ARASFVTVSRIDGGFG 1892 (2582)
T ss_pred -ccceEEEeccccccccccccccccchhhH---HHHHHHHHHHHhhchhhccC-----------CCeEEEEEEecCCccc
Confidence 499999987754210 0011110001111 12334566777766665532 4678999998887666
Q ss_pred ccCCCCCcc-----chhhHHHHHHHHHHHHhhccCCCeEEEEecCc
Q psy11190 162 DNTQGGFHP-----YRCSKAALNAATRSLSIDLKGDKIIATAMHPG 202 (248)
Q Consensus 162 ~~~~~~~~~-----y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG 202 (248)
......... -....+++.+|+|++++||....+|...+.|.
T Consensus 1893 ~~~~~~~~~~~~~~~~~~~a~l~Gl~Ktl~~E~P~~~~r~vDl~~~ 1938 (2582)
T TIGR02813 1893 YSNGDADSGTQQVKAELNQAALAGLTKTLNHEWNAVFCRALDLAPK 1938 (2582)
T ss_pred cCCccccccccccccchhhhhHHHHHHhHHHHCCCCeEEEEeCCCC
Confidence 421111100 13458899999999999998878888888775
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.0061 Score=52.25 Aligned_cols=119 Identities=15% Similarity=0.233 Sum_probs=67.7
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCc--hhHHHHH-HHHhh--cCCceeEEeeccCCchhhhhHHHHhh
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNK--DKAVELL-ALAQQ--HSNLHVIELDVTDFSKQQDVLFKDIS 77 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~--~~~~~~~-~~~~~--~~~~~~~~~D~~~~~~~v~~~~~~i~ 77 (248)
++.|+|++|.+|..++..|+..|. ...|++++++. ++++... ++... ..... .....++ + .+.+.
T Consensus 2 kI~IiGatG~vG~~~a~~l~~~g~--~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~-~~i~~~~--d-----~~~l~ 71 (309)
T cd05294 2 KVSIIGASGRVGSATALLLAKEDV--VKEINLISRPKSLEKLKGLRLDIYDALAAAGID-AEIKISS--D-----LSDVA 71 (309)
T ss_pred EEEEECCCChHHHHHHHHHHhCCC--CCEEEEEECcccccccccccchhhhchhccCCC-cEEEECC--C-----HHHhC
Confidence 578999999999999999999882 23599999954 3333221 11110 00000 0111111 1 01122
Q ss_pred hhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCC
Q psy11190 78 DVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIM 157 (248)
Q Consensus 78 ~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~ 157 (248)
+.|++|.++|.... ...+..++ + .....+++.+.+.+.+.. +++.+++++++.
T Consensus 72 ------~aDiViitag~p~~----~~~~r~dl---~----~~n~~i~~~~~~~i~~~~----------~~~~viv~~npv 124 (309)
T cd05294 72 ------GSDIVIITAGVPRK----EGMSRLDL---A----KKNAKIVKKYAKQIAEFA----------PDTKILVVTNPV 124 (309)
T ss_pred ------CCCEEEEecCCCCC----CCCCHHHH---H----HHHHHHHHHHHHHHHHHC----------CCeEEEEeCCch
Confidence 38999999987432 12232222 1 234456666666666542 577889988866
Q ss_pred C
Q psy11190 158 G 158 (248)
Q Consensus 158 ~ 158 (248)
.
T Consensus 125 d 125 (309)
T cd05294 125 D 125 (309)
T ss_pred H
Confidence 4
|
The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox |
| >PRK06849 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.0073 Score=53.42 Aligned_cols=83 Identities=14% Similarity=0.161 Sum_probs=51.2
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
+|++||||++..+|..+++.|.+.| .+|++++.+........... .....+...-.+.+..++.+.+-++ .
T Consensus 4 ~~~VLI~G~~~~~~l~iar~l~~~G----~~Vi~~d~~~~~~~~~s~~~---d~~~~~p~p~~d~~~~~~~L~~i~~-~- 74 (389)
T PRK06849 4 KKTVLITGARAPAALELARLFHNAG----HTVILADSLKYPLSRFSRAV---DGFYTIPSPRWDPDAYIQALLSIVQ-R- 74 (389)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCC----CEEEEEeCCchHHHHHHHhh---hheEEeCCCCCCHHHHHHHHHHHHH-H-
Confidence 4789999999999999999999999 99999998865432111111 1212221122233331333333222 2
Q ss_pred cCCCccEEEecccc
Q psy11190 81 KDQGLNVLVNNAGI 94 (248)
Q Consensus 81 ~~~~iD~lv~~ag~ 94 (248)
.++|+||.....
T Consensus 75 --~~id~vIP~~e~ 86 (389)
T PRK06849 75 --ENIDLLIPTCEE 86 (389)
T ss_pred --cCCCEEEECChH
Confidence 349999987753
|
|
| >TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.0069 Score=51.22 Aligned_cols=44 Identities=30% Similarity=0.353 Sum_probs=37.2
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALA 49 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~ 49 (248)
|+++|.|+ ||.+++++..|++.|+ .+|+++.|+.++++++.+..
T Consensus 126 k~vlvlGa-GGaarai~~aL~~~G~---~~i~I~nRt~~ka~~La~~~ 169 (282)
T TIGR01809 126 FRGLVIGA-GGTSRAAVYALASLGV---TDITVINRNPDKLSRLVDLG 169 (282)
T ss_pred ceEEEEcC-cHHHHHHHHHHHHcCC---CeEEEEeCCHHHHHHHHHHh
Confidence 46788865 9999999999999995 68999999999888875544
|
This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway. |
| >cd05293 LDH_1 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.039 Score=47.35 Aligned_cols=120 Identities=16% Similarity=0.157 Sum_probs=74.3
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH-HHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL-LALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
.+.|+|+ |.+|..+|..|+..| ....+++++.+.+.++.. .++....+.... ..+....+ . +.+.
T Consensus 5 Ki~IiGa-G~VG~~~a~~l~~~~--~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~--~~v~~~~d-y----~~~~---- 70 (312)
T cd05293 5 KVTVVGV-GQVGMACAISILAKG--LADELVLVDVVEDKLKGEAMDLQHGSAFLKN--PKIEADKD-Y----SVTA---- 70 (312)
T ss_pred EEEEECC-CHHHHHHHHHHHhcC--CCCEEEEEeCCccHHHHHHHHHHHhhccCCC--CEEEECCC-H----HHhC----
Confidence 5788896 999999999999888 457899999988765544 333322110000 01111011 0 1122
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
+.|++|.+||.... ...+..++ +....-+.+.+.+.+.+.. +++.++++|.+...
T Consensus 71 --~adivvitaG~~~k----~g~~R~dl-------l~~N~~i~~~~~~~i~~~~----------p~~~vivvsNP~d~ 125 (312)
T cd05293 71 --NSKVVIVTAGARQN----EGESRLDL-------VQRNVDIFKGIIPKLVKYS----------PNAILLVVSNPVDI 125 (312)
T ss_pred --CCCEEEECCCCCCC----CCCCHHHH-------HHHHHHHHHHHHHHHHHhC----------CCcEEEEccChHHH
Confidence 38999999997542 12344332 2345567777777777753 68899999987644
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.0054 Score=55.21 Aligned_cols=36 Identities=25% Similarity=0.338 Sum_probs=31.6
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKA 42 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~ 42 (248)
|+++|||+++ +|.++|+.|+++| +.|++.+++....
T Consensus 6 k~v~v~G~g~-~G~s~a~~l~~~G----~~V~~~d~~~~~~ 41 (447)
T PRK02472 6 KKVLVLGLAK-SGYAAAKLLHKLG----ANVTVNDGKPFSE 41 (447)
T ss_pred CEEEEEeeCH-HHHHHHHHHHHCC----CEEEEEcCCCccc
Confidence 6899999986 9999999999999 8999999876443
|
|
| >cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.013 Score=50.17 Aligned_cols=120 Identities=17% Similarity=0.183 Sum_probs=69.4
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH-HHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL-LALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
.+.|+|++|.+|..+|..|+.++. ...+++++.+ .++.. .++........+.... .+ ++ ..+.+.
T Consensus 2 KI~IIGaaG~VG~~~a~~l~~~~~--~~elvLiDi~--~a~g~alDL~~~~~~~~i~~~~-~~-~~--------~y~~~~ 67 (310)
T cd01337 2 KVAVLGAAGGIGQPLSLLLKLNPL--VSELALYDIV--NTPGVAADLSHINTPAKVTGYL-GP-EE--------LKKALK 67 (310)
T ss_pred EEEEECCCCHHHHHHHHHHHhCCC--CcEEEEEecC--ccceeehHhHhCCCcceEEEec-CC-Cc--------hHHhcC
Confidence 467889999999999999998883 3679999988 32221 2222111111111110 00 00 111122
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
+.|++|.+||.... + ..+..+ .++ ....+.+...+.+.+.. +++.++++|.+...
T Consensus 68 --daDivvitaG~~~k--~--g~tR~d---ll~----~N~~i~~~i~~~i~~~~----------p~a~vivvtNPvDv 122 (310)
T cd01337 68 --GADVVVIPAGVPRK--P--GMTRDD---LFN----INAGIVRDLATAVAKAC----------PKALILIISNPVNS 122 (310)
T ss_pred --CCCEEEEeCCCCCC--C--CCCHHH---HHH----HHHHHHHHHHHHHHHhC----------CCeEEEEccCchhh
Confidence 38999999997532 1 223333 222 34455666666666543 68899999998844
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >COG3268 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.0098 Score=50.63 Aligned_cols=111 Identities=20% Similarity=0.181 Sum_probs=70.2
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhcC
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVKD 82 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~~ 82 (248)
..+|-||+|--|.-+|++|+++| ..-.+.+||.+++..+...+ +.....+++++ ++. +.+...
T Consensus 8 d~iiYGAtGy~G~lvae~l~~~g----~~~aLAgRs~~kl~~l~~~L--G~~~~~~p~~~--p~~--------~~~~~~- 70 (382)
T COG3268 8 DIIIYGATGYAGGLVAEYLAREG----LTAALAGRSSAKLDALRASL--GPEAAVFPLGV--PAA--------LEAMAS- 70 (382)
T ss_pred eEEEEccccchhHHHHHHHHHcC----CchhhccCCHHHHHHHHHhc--CccccccCCCC--HHH--------HHHHHh-
Confidence 57899999999999999999999 77799999999998886555 23333444443 222 223323
Q ss_pred CCccEEEeccccCCccc-cCCCCChhhhhheeeecchhhHHHHHHHhHHHHh
Q psy11190 83 QGLNVLVNNAGIAAKFT-RLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKK 133 (248)
Q Consensus 83 ~~iD~lv~~ag~~~~~~-~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 133 (248)
..++|+||+|...... ++-..-...-.++ +.+.|-+.+.+.....-.+
T Consensus 71 -~~~VVlncvGPyt~~g~plv~aC~~~GTdY--~DiTGEi~~fe~~i~~yh~ 119 (382)
T COG3268 71 -RTQVVLNCVGPYTRYGEPLVAACAAAGTDY--ADITGEIMFFENSIDLYHA 119 (382)
T ss_pred -cceEEEeccccccccccHHHHHHHHhCCCe--eeccccHHHHHHHHHHHHH
Confidence 4899999999764311 1100000111112 2356777777776666343
|
|
| >TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.011 Score=50.73 Aligned_cols=120 Identities=18% Similarity=0.239 Sum_probs=70.1
Q ss_pred EEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhcCC
Q psy11190 4 ILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVKDQ 83 (248)
Q Consensus 4 ~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~~~ 83 (248)
+.|+|++|.+|..+|..|+.++ ....+++++.+....+. .++........+.... +.++ ..+.+.
T Consensus 2 V~IiGaaG~VG~~~a~~l~~~~--~~~elvL~Di~~a~g~a-~DL~~~~~~~~i~~~~--~~~~--------~~~~~~-- 66 (312)
T TIGR01772 2 VAVLGAAGGIGQPLSLLLKLQP--YVSELSLYDIAGAAGVA-ADLSHIPTAASVKGFS--GEEG--------LENALK-- 66 (312)
T ss_pred EEEECCCCHHHHHHHHHHHhCC--CCcEEEEecCCCCcEEE-chhhcCCcCceEEEec--CCCc--------hHHHcC--
Confidence 6899999999999999999888 34689999987621111 1121111111111000 0000 112222
Q ss_pred CccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 84 GLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 84 ~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
+.|++|..||.... + ..+.. ..+..|+ .+.+...+.+.+.. +++.++++|.+...
T Consensus 67 daDivvitaG~~~~--~--g~~R~---dll~~N~----~I~~~i~~~i~~~~----------p~~iiivvsNPvDv 121 (312)
T TIGR01772 67 GADVVVIPAGVPRK--P--GMTRD---DLFNVNA----GIVKDLVAAVAESC----------PKAMILVITNPVNS 121 (312)
T ss_pred CCCEEEEeCCCCCC--C--CccHH---HHHHHhH----HHHHHHHHHHHHhC----------CCeEEEEecCchhh
Confidence 48999999997532 1 22332 2333344 36777777776653 68899999998864
|
Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases. |
| >PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.02 Score=45.26 Aligned_cols=68 Identities=10% Similarity=0.230 Sum_probs=42.0
Q ss_pred CCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhcCCCccEEE
Q psy11190 10 NRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVKDQGLNVLV 89 (248)
Q Consensus 10 s~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~~~~iD~lv 89 (248)
||-.|.++|+.+..+| +.|+++..... ... ...+..+ ++.+ ...+++.+.+.+.+ .|++|
T Consensus 28 SG~~G~~lA~~~~~~G----a~V~li~g~~~-~~~-------p~~~~~i--~v~s----a~em~~~~~~~~~~--~Di~I 87 (185)
T PF04127_consen 28 SGKMGAALAEEAARRG----AEVTLIHGPSS-LPP-------PPGVKVI--RVES----AEEMLEAVKELLPS--ADIII 87 (185)
T ss_dssp -SHHHHHHHHHHHHTT-----EEEEEE-TTS------------TTEEEE--E-SS----HHHHHHHHHHHGGG--GSEEE
T ss_pred cCHHHHHHHHHHHHCC----CEEEEEecCcc-ccc-------cccceEE--Eecc----hhhhhhhhccccCc--ceeEE
Confidence 5678999999999999 89999887742 110 1233333 3333 56666677777663 69999
Q ss_pred eccccCCc
Q psy11190 90 NNAGIAAK 97 (248)
Q Consensus 90 ~~ag~~~~ 97 (248)
++|++++.
T Consensus 88 ~aAAVsDf 95 (185)
T PF04127_consen 88 MAAAVSDF 95 (185)
T ss_dssp E-SB--SE
T ss_pred Eecchhhe
Confidence 99998865
|
These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A. |
| >cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.028 Score=46.99 Aligned_cols=125 Identities=16% Similarity=0.098 Sum_probs=73.7
Q ss_pred EEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhcCC
Q psy11190 4 ILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVKDQ 83 (248)
Q Consensus 4 ~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~~~ 83 (248)
+.|+|++|.+|..++..|+..|......|++.+.++++++.....++...... ....++-..+ ..+.+.
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~-~~~~i~~~~d--------~~~~~~-- 69 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPL-ADIKVSITDD--------PYEAFK-- 69 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhc-cCcEEEECCc--------hHHHhC--
Confidence 36889988999999999997772223689999999887766533222211111 1112211111 112222
Q ss_pred CccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 84 GLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 84 ~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+.|++|..+|..... ..+..+ .+....-+.+.+.+.+.+.. +++.++++|.+....
T Consensus 70 ~aDiVv~t~~~~~~~----g~~r~~-------~~~~n~~i~~~i~~~i~~~~----------p~a~~i~~tNP~d~~ 125 (263)
T cd00650 70 DADVVIITAGVGRKP----GMGRLD-------LLKRNVPIVKEIGDNIEKYS----------PDAWIIVVSNPVDII 125 (263)
T ss_pred CCCEEEECCCCCCCc----CCCHHH-------HHHHHHHHHHHHHHHHHHHC----------CCeEEEEecCcHHHH
Confidence 389999999875431 111111 12244556777777777653 678888888766443
|
Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains |
| >PLN00112 malate dehydrogenase (NADP); Provisional | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.047 Score=48.99 Aligned_cols=120 Identities=9% Similarity=0.093 Sum_probs=74.3
Q ss_pred eEEEecCCCchhHHHHHHHHhC-------CCCCCceEEEeecCchhHHHH-HHHHhhc-CCceeEEeeccCCchhhhhHH
Q psy11190 3 SILITGCNRGLGLGMIKVLVGL-------GNNQPAHIFATCRNKDKAVEL-LALAQQH-SNLHVIELDVTDFSKQQDVLF 73 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~-------g~~~~~~V~~~~r~~~~~~~~-~~~~~~~-~~~~~~~~D~~~~~~~v~~~~ 73 (248)
.+.|+|++|.+|.+++-.|+.. +. ..++++++++.+.++.. .++.... ....-+..-..+.+
T Consensus 102 KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i--~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~~~~ye------- 172 (444)
T PLN00112 102 NVAVSGAAGMISNHLLFKLASGEVFGPDQPI--ALKLLGSERSKQALEGVAMELEDSLYPLLREVSIGIDPYE------- 172 (444)
T ss_pred EEEEECCCcHHHHHHHHHHHhcccccCCCCc--ccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEecCCHH-------
Confidence 4789999999999999999988 52 24799999999887765 3333211 11000110011111
Q ss_pred HHhhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHh-hhhcccCCCCCCCCceEEE
Q psy11190 74 KDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKK-ASEANSAAPLGSSRAAIVN 152 (248)
Q Consensus 74 ~~i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~~~~~~~~~~~~~~iv~ 152 (248)
.+. +.|++|..||.... + ..+..++ ++ ...-+.+...+.+.+ .. +++.||+
T Consensus 173 -----~~k--daDiVVitAG~prk--p--G~tR~dL---l~----~N~~I~k~i~~~I~~~a~----------p~~ivIV 224 (444)
T PLN00112 173 -----VFQ--DAEWALLIGAKPRG--P--GMERADL---LD----INGQIFAEQGKALNEVAS----------RNVKVIV 224 (444)
T ss_pred -----HhC--cCCEEEECCCCCCC--C--CCCHHHH---HH----HHHHHHHHHHHHHHHhcC----------CCeEEEE
Confidence 122 38999999997532 1 2233332 22 445677777777776 33 6889999
Q ss_pred eecCCCc
Q psy11190 153 VSSIMGS 159 (248)
Q Consensus 153 vss~~~~ 159 (248)
+|.+...
T Consensus 225 VsNPvDv 231 (444)
T PLN00112 225 VGNPCNT 231 (444)
T ss_pred cCCcHHH
Confidence 9987643
|
|
| >PRK12549 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.029 Score=47.48 Aligned_cols=44 Identities=18% Similarity=0.249 Sum_probs=36.9
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALA 49 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~ 49 (248)
|+++|.|+ ||.|++++..|++.|+ .+|++++|+.++++.+.+..
T Consensus 128 k~vlIlGa-GGaaraia~aL~~~G~---~~I~I~nR~~~ka~~la~~l 171 (284)
T PRK12549 128 ERVVQLGA-GGAGAAVAHALLTLGV---ERLTIFDVDPARAAALADEL 171 (284)
T ss_pred CEEEEECC-cHHHHHHHHHHHHcCC---CEEEEECCCHHHHHHHHHHH
Confidence 46788876 7799999999999995 58999999999988885544
|
|
| >PRK12749 quinate/shikimate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.018 Score=48.92 Aligned_cols=43 Identities=19% Similarity=0.151 Sum_probs=34.0
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCch---hHHHHHHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKD---KAVELLAL 48 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~---~~~~~~~~ 48 (248)
|+++|.|+ ||-+++++-.|+..|+ .+|.++.|+.+ +++++.+.
T Consensus 125 k~vlvlGa-GGaarAi~~~l~~~g~---~~i~i~nRt~~~~~ka~~la~~ 170 (288)
T PRK12749 125 KTMVLLGA-GGASTAIGAQGAIEGL---KEIKLFNRRDEFFDKALAFAQR 170 (288)
T ss_pred CEEEEECC-cHHHHHHHHHHHHCCC---CEEEEEeCCccHHHHHHHHHHH
Confidence 57899997 6669999999999996 69999999964 55555443
|
|
| >PRK06223 malate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.027 Score=48.19 Aligned_cols=122 Identities=17% Similarity=0.198 Sum_probs=69.7
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHH-HHHhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELL-ALAQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|+.+.|.|+ |-+|..++..|+.+|. + .|++.+++.+.++... ++..... .......++...+ . +.+
T Consensus 2 ~~KI~VIGa-G~vG~~ia~~la~~~~--~-ev~L~D~~~~~~~~~~~dl~~~~~-~~~~~~~i~~~~d-~----~~~--- 68 (307)
T PRK06223 2 RKKISIIGA-GNVGATLAHLLALKEL--G-DVVLFDIVEGVPQGKALDIAEAAP-VEGFDTKITGTND-Y----EDI--- 68 (307)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCC--e-EEEEEECCCchhHHHHHHHHhhhh-hcCCCcEEEeCCC-H----HHH---
Confidence 677889998 8889999999998882 2 8999999887655432 2211110 0000011111011 0 112
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
. +.|++|.++|.... + ..+..+. + ....-+.+.+.+.+.+.. +++.++++|.+...
T Consensus 69 -~--~aDiVii~~~~p~~--~--~~~r~~~---~----~~n~~i~~~i~~~i~~~~----------~~~~viv~tNP~d~ 124 (307)
T PRK06223 69 -A--GSDVVVITAGVPRK--P--GMSRDDL---L----GINAKIMKDVAEGIKKYA----------PDAIVIVVTNPVDA 124 (307)
T ss_pred -C--CCCEEEECCCCCCC--c--CCCHHHH---H----HHHHHHHHHHHHHHHHHC----------CCeEEEEecCcHHH
Confidence 2 38999999986432 1 1222221 1 234456667777766642 46778888876643
|
|
| >TIGR01759 MalateDH-SF1 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.054 Score=46.72 Aligned_cols=121 Identities=10% Similarity=0.076 Sum_probs=70.2
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCc-----eEEEeecCc--hhHHHH-HHHHhhc-CCceeEEeeccCCchhhhhHH
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPA-----HIFATCRNK--DKAVEL-LALAQQH-SNLHVIELDVTDFSKQQDVLF 73 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~-----~V~~~~r~~--~~~~~~-~~~~~~~-~~~~~~~~D~~~~~~~v~~~~ 73 (248)
.+.|+|++|.+|..++..|+..+. -. .+++.+.+. +.++.. .++.... .... ...++. +.
T Consensus 5 KV~IIGa~G~VG~~~a~~l~~~~~--~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~--~~~i~~-~~------ 73 (323)
T TIGR01759 5 RVAVTGAAGQIGYSLLFRIASGEL--FGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLA--GVVATT-DP------ 73 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCc--ccCCCccEEEEEecCCcccccchHHHHHhhccccccC--CcEEec-Ch------
Confidence 478999999999999999998883 23 699999865 223332 2222111 0000 000110 11
Q ss_pred HHhhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEe
Q psy11190 74 KDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNV 153 (248)
Q Consensus 74 ~~i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~v 153 (248)
.+.+. ..|++|..||.... + ..+..++. .....+.+.+.+.+.+... +++.++++
T Consensus 74 ---~~~~~--daDvVVitAG~~~k--~--g~tR~dll-------~~Na~i~~~i~~~i~~~~~---------~~~iiivv 128 (323)
T TIGR01759 74 ---EEAFK--DVDAALLVGAFPRK--P--GMERADLL-------SKNGKIFKEQGKALNKVAK---------KDVKVLVV 128 (323)
T ss_pred ---HHHhC--CCCEEEEeCCCCCC--C--CCcHHHHH-------HHHHHHHHHHHHHHHhhCC---------CCeEEEEe
Confidence 11112 38999999997532 1 23443332 2455677777777777531 27888888
Q ss_pred ecCCCc
Q psy11190 154 SSIMGS 159 (248)
Q Consensus 154 ss~~~~ 159 (248)
|.+...
T Consensus 129 sNPvDv 134 (323)
T TIGR01759 129 GNPANT 134 (323)
T ss_pred CCcHHH
Confidence 876633
|
This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms. |
| >PRK05442 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.046 Score=47.24 Aligned_cols=119 Identities=9% Similarity=0.052 Sum_probs=70.6
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCc-----eEEEeecCch--hHHHH-HHHHhhc----CCceeEEeeccCCchhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPA-----HIFATCRNKD--KAVEL-LALAQQH----SNLHVIELDVTDFSKQQ 69 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~-----~V~~~~r~~~--~~~~~-~~~~~~~----~~~~~~~~D~~~~~~~v 69 (248)
+.+.|+|++|.+|..++..|+..+. -. .+++.+.+.+ +++.. .++.... .++. ++. +
T Consensus 5 ~KV~IiGaaG~VG~~~a~~l~~~~~--~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~-----i~~-~--- 73 (326)
T PRK05442 5 VRVAVTGAAGQIGYSLLFRIASGDM--LGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVV-----ITD-D--- 73 (326)
T ss_pred cEEEEECCCcHHHHHHHHHHHhhhh--cCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcE-----Eec-C---
Confidence 4789999999999999999998773 23 6999998543 22222 1221110 1111 111 0
Q ss_pred hhHHHHhhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCce
Q psy11190 70 DVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAA 149 (248)
Q Consensus 70 ~~~~~~i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~ 149 (248)
-.+.+. +.|++|.+||.... + ..+..++- .....+.+.+.+.+.+... +++.
T Consensus 74 ------~y~~~~--daDiVVitaG~~~k--~--g~tR~dll-------~~Na~i~~~i~~~i~~~~~---------~~~i 125 (326)
T PRK05442 74 ------PNVAFK--DADVALLVGARPRG--P--GMERKDLL-------EANGAIFTAQGKALNEVAA---------RDVK 125 (326)
T ss_pred ------hHHHhC--CCCEEEEeCCCCCC--C--CCcHHHHH-------HHHHHHHHHHHHHHHHhCC---------CCeE
Confidence 111122 38999999997532 1 22443332 2455677888888877321 4788
Q ss_pred EEEeecCCCc
Q psy11190 150 IVNVSSIMGS 159 (248)
Q Consensus 150 iv~vss~~~~ 159 (248)
++++|.+...
T Consensus 126 iivvsNPvDv 135 (326)
T PRK05442 126 VLVVGNPANT 135 (326)
T ss_pred EEEeCCchHH
Confidence 8998876643
|
|
| >PLN02602 lactate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.27 E-value=0.09 Score=45.86 Aligned_cols=122 Identities=15% Similarity=0.195 Sum_probs=74.5
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH-HHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL-LALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
+.+.|+|+ |.+|..+|..|+.++ ....+++++.+.+.++.. .++......... ..+....+ .+.++
T Consensus 38 ~KI~IIGa-G~VG~~~a~~l~~~~--l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~--~~i~~~~d-----y~~~~--- 104 (350)
T PLN02602 38 TKVSVVGV-GNVGMAIAQTILTQD--LADELALVDVNPDKLRGEMLDLQHAAAFLPR--TKILASTD-----YAVTA--- 104 (350)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCC--CCCEEEEEeCCCchhhHHHHHHHhhhhcCCC--CEEEeCCC-----HHHhC---
Confidence 46889996 999999999999888 346899999988765544 233221110000 12211111 01122
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+.|++|..||.... + ..+..++ +....-+.+.+.+.+.+.. +++.++++|.+....
T Consensus 105 ---daDiVVitAG~~~k--~--g~tR~dl-------l~~N~~I~~~i~~~I~~~~----------p~~ivivvtNPvdv~ 160 (350)
T PLN02602 105 ---GSDLCIVTAGARQI--P--GESRLNL-------LQRNVALFRKIIPELAKYS----------PDTILLIVSNPVDVL 160 (350)
T ss_pred ---CCCEEEECCCCCCC--c--CCCHHHH-------HHHHHHHHHHHHHHHHHHC----------CCeEEEEecCchHHH
Confidence 38999999997532 1 2233332 2245567777777777653 688899999766443
|
|
| >PRK14027 quinate/shikimate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.029 Score=47.48 Aligned_cols=44 Identities=20% Similarity=0.287 Sum_probs=37.5
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALA 49 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~ 49 (248)
|+++|.|+ ||-+++++-.|++.|+ .+|+++.|+.++++++.+..
T Consensus 128 k~vlilGa-GGaarAi~~aL~~~g~---~~i~i~nR~~~ka~~La~~~ 171 (283)
T PRK14027 128 DSVVQVGA-GGVGNAVAYALVTHGV---QKLQVADLDTSRAQALADVI 171 (283)
T ss_pred CeEEEECC-cHHHHHHHHHHHHCCC---CEEEEEcCCHHHHHHHHHHH
Confidence 56888887 8999999999999996 68999999999888885543
|
|
| >COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only] | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.024 Score=49.05 Aligned_cols=78 Identities=22% Similarity=0.473 Sum_probs=49.3
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
.++||+||+||+|...+..+...| +.++++..+.++.+.+.++.. . ++ .|..+.+ +.+.+++..+
T Consensus 144 ~~VLV~gaaGgVG~~aiQlAk~~G----~~~v~~~~s~~k~~~~~~lGA---d-~v--i~y~~~~-----~~~~v~~~t~ 208 (326)
T COG0604 144 ETVLVHGAAGGVGSAAIQLAKALG----ATVVAVVSSSEKLELLKELGA---D-HV--INYREED-----FVEQVRELTG 208 (326)
T ss_pred CEEEEecCCchHHHHHHHHHHHcC----CcEEEEecCHHHHHHHHhcCC---C-EE--EcCCccc-----HHHHHHHHcC
Confidence 579999999999999888888888 566676666655553333321 1 11 2233222 3344555443
Q ss_pred CCCccEEEecccc
Q psy11190 82 DQGLNVLVNNAGI 94 (248)
Q Consensus 82 ~~~iD~lv~~ag~ 94 (248)
..++|+++...|.
T Consensus 209 g~gvDvv~D~vG~ 221 (326)
T COG0604 209 GKGVDVVLDTVGG 221 (326)
T ss_pred CCCceEEEECCCH
Confidence 2359999999875
|
|
| >PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.0078 Score=39.83 Aligned_cols=33 Identities=30% Similarity=0.591 Sum_probs=21.3
Q ss_pred ceEEEecCCCchhHH--HHHHHHhCCCCCCceEEEeecCc
Q psy11190 2 KSILITGCNRGLGLG--MIKVLVGLGNNQPAHIFATCRNK 39 (248)
Q Consensus 2 k~~lVtGas~giG~~--ia~~l~~~g~~~~~~V~~~~r~~ 39 (248)
|++||+|+|+|.|.+ ++..| ..| +..+-+..+.
T Consensus 40 K~VLViGaStGyGLAsRIa~aF-g~g----A~TiGV~fEk 74 (78)
T PF12242_consen 40 KKVLVIGASTGYGLASRIAAAF-GAG----ADTIGVSFEK 74 (78)
T ss_dssp SEEEEES-SSHHHHHHHHHHHH-CC------EEEEEE---
T ss_pred ceEEEEecCCcccHHHHHHHHh-cCC----CCEEEEeecc
Confidence 789999999999999 66666 344 6766666543
|
|
| >cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.018 Score=48.55 Aligned_cols=78 Identities=22% Similarity=0.392 Sum_probs=51.1
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
++++|+|+++++|+.+++.+...| +.|++++++.++.+.+.+. + +. ...+..+.+. ... +.+...
T Consensus 141 ~~vlv~g~~~~ig~~~~~~~~~~g----~~v~~~~~~~~~~~~~~~~---g--~~-~~~~~~~~~~-~~~----~~~~~~ 205 (323)
T cd05276 141 ETVLIHGGASGVGTAAIQLAKALG----ARVIATAGSEEKLEACRAL---G--AD-VAINYRTEDF-AEE----VKEATG 205 (323)
T ss_pred CEEEEEcCcChHHHHHHHHHHHcC----CEEEEEcCCHHHHHHHHHc---C--CC-EEEeCCchhH-HHH----HHHHhC
Confidence 479999999999999999999999 8899999887665554321 1 11 1233332222 222 222222
Q ss_pred CCCccEEEecccc
Q psy11190 82 DQGLNVLVNNAGI 94 (248)
Q Consensus 82 ~~~iD~lv~~ag~ 94 (248)
..++|.+++++|.
T Consensus 206 ~~~~d~vi~~~g~ 218 (323)
T cd05276 206 GRGVDVILDMVGG 218 (323)
T ss_pred CCCeEEEEECCch
Confidence 1259999999874
|
PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding |
| >cd05290 LDH_3 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.053 Score=46.47 Aligned_cols=118 Identities=14% Similarity=0.221 Sum_probs=73.2
Q ss_pred EEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH-HHHHhhcC-----CceeEEeeccCCchhhhhHHHHhh
Q psy11190 4 ILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL-LALAQQHS-----NLHVIELDVTDFSKQQDVLFKDIS 77 (248)
Q Consensus 4 ~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~-~~~~~~~~-----~~~~~~~D~~~~~~~v~~~~~~i~ 77 (248)
+.|.|+ |.+|..+|..|+.++ ....+++++.+.+.++.. .++..... ++.+.. .+.+. +.
T Consensus 2 i~IIGa-G~VG~~~a~~l~~~~--~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~---~~y~~--------~~ 67 (307)
T cd05290 2 LVVIGA-GHVGSAVLNYALALG--LFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRA---GDYDD--------CA 67 (307)
T ss_pred EEEECC-CHHHHHHHHHHHhcC--CCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEE---CCHHH--------hC
Confidence 567787 999999999999888 345799999988765544 33332111 222221 12111 22
Q ss_pred hhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCC
Q psy11190 78 DVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIM 157 (248)
Q Consensus 78 ~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~ 157 (248)
+.|++|..||.... + ..+.+ -... +.....+.+...+.+.+.. +++.++.+|.+.
T Consensus 68 ------~aDivvitaG~~~k--p--g~tr~-R~dl----l~~N~~I~~~i~~~i~~~~----------p~~i~ivvsNPv 122 (307)
T cd05290 68 ------DADIIVITAGPSID--P--GNTDD-RLDL----AQTNAKIIREIMGNITKVT----------KEAVIILITNPL 122 (307)
T ss_pred ------CCCEEEECCCCCCC--C--CCCch-HHHH----HHHHHHHHHHHHHHHHHhC----------CCeEEEEecCcH
Confidence 38999999997533 1 12310 1111 2345667888888887764 678899998876
Q ss_pred Ccc
Q psy11190 158 GSI 160 (248)
Q Consensus 158 ~~~ 160 (248)
..+
T Consensus 123 Dv~ 125 (307)
T cd05290 123 DIA 125 (307)
T ss_pred HHH
Confidence 444
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.0089 Score=55.05 Aligned_cols=42 Identities=24% Similarity=0.308 Sum_probs=36.7
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLAL 48 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~ 48 (248)
|+++|+|+ ||+|++++..|+++| ++|+++.|+.++++++.+.
T Consensus 380 k~vlIlGa-GGagrAia~~L~~~G----~~V~i~nR~~e~a~~la~~ 421 (529)
T PLN02520 380 KLFVVIGA-GGAGKALAYGAKEKG----ARVVIANRTYERAKELADA 421 (529)
T ss_pred CEEEEECC-cHHHHHHHHHHHHCC----CEEEEEcCCHHHHHHHHHH
Confidence 68999999 699999999999999 8999999998877776443
|
|
| >TIGR00715 precor6x_red precorrin-6x reductase | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.013 Score=48.83 Aligned_cols=75 Identities=15% Similarity=0.193 Sum_probs=50.3
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhcC
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVKD 82 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~~ 82 (248)
++||+|||+- |+.+++.|.++| +.|+...++......+.. .+ ...+..+..|.++ ... .+.+
T Consensus 2 ~ILvlGGT~e-gr~la~~L~~~g----~~v~~s~~t~~~~~~~~~----~g-~~~v~~g~l~~~~-l~~---~l~~---- 63 (256)
T TIGR00715 2 TVLLMGGTVD-SRAIAKGLIAQG----IEILVTVTTSEGKHLYPI----HQ-ALTVHTGALDPQE-LRE---FLKR---- 63 (256)
T ss_pred eEEEEechHH-HHHHHHHHHhCC----CeEEEEEccCCccccccc----cC-CceEEECCCCHHH-HHH---HHHh----
Confidence 5999999998 999999999999 899999998765333221 11 2234455555444 222 2332
Q ss_pred CCccEEEeccccC
Q psy11190 83 QGLNVLVNNAGIA 95 (248)
Q Consensus 83 ~~iD~lv~~ag~~ 95 (248)
.++|.||..+...
T Consensus 64 ~~i~~VIDAtHPf 76 (256)
T TIGR00715 64 HSIDILVDATHPF 76 (256)
T ss_pred cCCCEEEEcCCHH
Confidence 2489999887543
|
This enzyme was found to be a monomer by gel filtration. |
| >PRK15116 sulfur acceptor protein CsdL; Provisional | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.038 Score=46.32 Aligned_cols=160 Identities=13% Similarity=0.172 Sum_probs=78.6
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhcC
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVKD 82 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~~ 82 (248)
.++|. |.||+|.++|+.|++.|. .++.+++.+.-....+- .++.+..-|+-. .. ++.+.+.+.+..+.
T Consensus 32 ~VlVv-G~GGVGs~vae~Lar~GV---g~itLiD~D~V~~sNln------RQ~~~~~~~vG~-~K-ve~~~~rl~~INP~ 99 (268)
T PRK15116 32 HICVV-GIGGVGSWAAEALARTGI---GAITLIDMDDVCVTNTN------RQIHALRDNVGL-AK-AEVMAERIRQINPE 99 (268)
T ss_pred CEEEE-CcCHHHHHHHHHHHHcCC---CEEEEEeCCEecccccc------cccccChhhcCh-HH-HHHHHHHHHhHCCC
Confidence 45555 557999999999999996 68999988754433221 011111222322 22 44555555554331
Q ss_pred CCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcccc
Q psy11190 83 QGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIED 162 (248)
Q Consensus 83 ~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~~ 162 (248)
+.+......+. + ....++-..+++ +=+.....+..-..+.....+ .+-.++.+.+..+...+
T Consensus 100 --~~V~~i~~~i~-~-e~~~~ll~~~~D--~VIdaiD~~~~k~~L~~~c~~------------~~ip~I~~gGag~k~dp 161 (268)
T PRK15116 100 --CRVTVVDDFIT-P-DNVAEYMSAGFS--YVIDAIDSVRPKAALIAYCRR------------NKIPLVTTGGAGGQIDP 161 (268)
T ss_pred --cEEEEEecccC-h-hhHHHHhcCCCC--EEEEcCCCHHHHHHHHHHHHH------------cCCCEEEECCcccCCCC
Confidence 22222211111 0 000000000111 222233333222223333333 23446666555554433
Q ss_pred cCCCCCccchhhHHHHHHHHHHHHhhccC-CCeE
Q psy11190 163 NTQGGFHPYRCSKAALNAATRSLSIDLKG-DKII 195 (248)
Q Consensus 163 ~~~~~~~~y~~sK~a~~~~~~~la~e~~~-~~i~ 195 (248)
.-...-..+|....-|++.++++|++ +||+
T Consensus 162 ---~~~~~~di~~t~~~pla~~~R~~lr~~~~~~ 192 (268)
T PRK15116 162 ---TQIQVVDLAKTIQDPLAAKLRERLKSDFGVV 192 (268)
T ss_pred ---CeEEEEeeecccCChHHHHHHHHHHHhhCCC
Confidence 22334566677778899999999987 5664
|
|
| >cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.08 Score=43.49 Aligned_cols=76 Identities=21% Similarity=0.309 Sum_probs=49.1
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
++++|+|+++ +|+++++.+...| .+|+.++++.++.+.+.+. +. -. ..|..+... ...+. ...
T Consensus 136 ~~vli~g~~~-~G~~~~~~a~~~g----~~v~~~~~~~~~~~~~~~~---g~-~~--~~~~~~~~~-~~~~~-----~~~ 198 (271)
T cd05188 136 DTVLVLGAGG-VGLLAAQLAKAAG----ARVIVTDRSDEKLELAKEL---GA-DH--VIDYKEEDL-EEELR-----LTG 198 (271)
T ss_pred CEEEEECCCH-HHHHHHHHHHHcC----CeEEEEcCCHHHHHHHHHh---CC-ce--eccCCcCCH-HHHHH-----Hhc
Confidence 4789999999 9999999998888 8999999987665544322 11 11 133333333 33322 112
Q ss_pred CCCccEEEecccc
Q psy11190 82 DQGLNVLVNNAGI 94 (248)
Q Consensus 82 ~~~iD~lv~~ag~ 94 (248)
..++|+++++++.
T Consensus 199 ~~~~d~vi~~~~~ 211 (271)
T cd05188 199 GGGADVVIDAVGG 211 (271)
T ss_pred CCCCCEEEECCCC
Confidence 2359999998863
|
The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro |
| >TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.073 Score=46.98 Aligned_cols=120 Identities=8% Similarity=0.049 Sum_probs=70.3
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCce------EEE--eecCchhHHHH-HHHHhhc-CCceeEEeeccCCchhhhhH
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAH------IFA--TCRNKDKAVEL-LALAQQH-SNLHVIELDVTDFSKQQDVL 72 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~------V~~--~~r~~~~~~~~-~~~~~~~-~~~~~~~~D~~~~~~~v~~~ 72 (248)
.+.|+|++|.+|.++|-.|+..+. +. +++ ++++.+.++.. .++...- .... ..-++. ..
T Consensus 46 KV~IIGAaG~VG~~~A~~l~~~~l---~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~--~v~i~~-~~----- 114 (387)
T TIGR01757 46 NVAVSGAAGMISNHLLFMLASGEV---FGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLR--EVSIGI-DP----- 114 (387)
T ss_pred EEEEECCCcHHHHHHHHHHHhccc---cCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcC--ceEEec-CC-----
Confidence 478999999999999999998884 33 333 47787776655 3333211 1110 011111 11
Q ss_pred HHHhhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEE
Q psy11190 73 FKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVN 152 (248)
Q Consensus 73 ~~~i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~ 152 (248)
.+.+. ..|++|..||.... + ..+..+ .+ .....+.+.+.+.+.+... +++.+++
T Consensus 115 ----y~~~k--daDIVVitAG~prk--p--g~tR~d---ll----~~N~~I~k~i~~~I~~~a~---------~~~iviV 168 (387)
T TIGR01757 115 ----YEVFE--DADWALLIGAKPRG--P--GMERAD---LL----DINGQIFADQGKALNAVAS---------KNCKVLV 168 (387)
T ss_pred ----HHHhC--CCCEEEECCCCCCC--C--CCCHHH---HH----HHHHHHHHHHHHHHHHhCC---------CCeEEEE
Confidence 01122 39999999997532 1 223333 22 2445667777777776321 5788999
Q ss_pred eecCCCc
Q psy11190 153 VSSIMGS 159 (248)
Q Consensus 153 vss~~~~ 159 (248)
+|.+...
T Consensus 169 VsNPvDv 175 (387)
T TIGR01757 169 VGNPCNT 175 (387)
T ss_pred cCCcHHH
Confidence 9876643
|
This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized. |
| >PRK13940 glutamyl-tRNA reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.026 Score=50.40 Aligned_cols=74 Identities=18% Similarity=0.305 Sum_probs=51.2
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|+++|.|+ ||+|+.+++.|+++|. ..++++.|+.++++.+.+... ....+ ++ ++ ..+.+.
T Consensus 182 kkvlviGa-G~~a~~va~~L~~~g~---~~I~V~nRt~~ra~~La~~~~---~~~~~--~~---~~--------l~~~l~ 241 (414)
T PRK13940 182 KNVLIIGA-GQTGELLFRHVTALAP---KQIMLANRTIEKAQKITSAFR---NASAH--YL---SE--------LPQLIK 241 (414)
T ss_pred CEEEEEcC-cHHHHHHHHHHHHcCC---CEEEEECCCHHHHHHHHHHhc---CCeEe--cH---HH--------HHHHhc
Confidence 57888887 9999999999999995 689999999888777754432 11111 11 11 223233
Q ss_pred CCCccEEEeccccCCc
Q psy11190 82 DQGLNVLVNNAGIAAK 97 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~ 97 (248)
..|+||++.+...+
T Consensus 242 --~aDiVI~aT~a~~~ 255 (414)
T PRK13940 242 --KADIIIAAVNVLEY 255 (414)
T ss_pred --cCCEEEECcCCCCe
Confidence 38999999876544
|
|
| >cd05292 LDH_2 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=96.00 E-value=0.037 Score=47.40 Aligned_cols=120 Identities=23% Similarity=0.241 Sum_probs=69.8
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH-HHHHhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL-LALAQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|| +.|.|+ |.+|..++..|+.+|. ...|++++++.+.++.. .++......... ..+.. .. ..+
T Consensus 1 mk-I~IIGa-G~VG~~~a~~l~~~g~--~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~--~~i~~-~d--------~~~- 64 (308)
T cd05292 1 MK-VAIVGA-GFVGSTTAYALLLRGL--ASEIVLVDINKAKAEGEAMDLAHGTPFVKP--VRIYA-GD--------YAD- 64 (308)
T ss_pred CE-EEEECC-CHHHHHHHHHHHHcCC--CCEEEEEECCchhhhhHHHHHHccccccCC--eEEee-CC--------HHH-
Confidence 65 667777 8999999999999882 25899999998776532 333321110000 01110 11 111
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
+. +.|++|.++|.... + ..+.. .. +.....+.+.+.+.+.+.. +++.+++++.....
T Consensus 65 l~--~aDiViita~~~~~--~--~~~r~---dl----~~~n~~i~~~~~~~l~~~~----------~~giiiv~tNP~d~ 121 (308)
T cd05292 65 CK--GADVVVITAGANQK--P--GETRL---DL----LKRNVAIFKEIIPQILKYA----------PDAILLVVTNPVDV 121 (308)
T ss_pred hC--CCCEEEEccCCCCC--C--CCCHH---HH----HHHHHHHHHHHHHHHHHHC----------CCeEEEEecCcHHH
Confidence 22 38999999986532 1 11222 22 2345556677777766643 57888888765543
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.026 Score=55.68 Aligned_cols=80 Identities=18% Similarity=0.189 Sum_probs=57.0
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCC----------CceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQ----------PAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQD 70 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~----------~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~ 70 (248)
||.++|.|+ |.+|+..++.|++..... ...|.+++++.+.++++.+. .+++.++++|++|.++ +.
T Consensus 569 ~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~---~~~~~~v~lDv~D~e~-L~ 643 (1042)
T PLN02819 569 SQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEG---IENAEAVQLDVSDSES-LL 643 (1042)
T ss_pred CCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHh---cCCCceEEeecCCHHH-HH
Confidence 678999997 999999999999765210 12488899988776665432 2367789999998766 32
Q ss_pred hHHHHhhhhhcCCCccEEEecccc
Q psy11190 71 VLFKDISDVVKDQGLNVLVNNAGI 94 (248)
Q Consensus 71 ~~~~~i~~~~~~~~iD~lv~~ag~ 94 (248)
++ +. ++|+||++...
T Consensus 644 ~~---v~------~~DaVIsalP~ 658 (1042)
T PLN02819 644 KY---VS------QVDVVISLLPA 658 (1042)
T ss_pred Hh---hc------CCCEEEECCCc
Confidence 22 23 28999998764
|
|
| >PTZ00082 L-lactate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.11 Score=44.70 Aligned_cols=122 Identities=17% Similarity=0.217 Sum_probs=69.6
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH-HHHHhh---cC-CceeEEeeccCCchhhhhHHHHh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL-LALAQQ---HS-NLHVIELDVTDFSKQQDVLFKDI 76 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~-~~~~~~---~~-~~~~~~~D~~~~~~~v~~~~~~i 76 (248)
+.+.|.| +|.+|..++..++..|. ..|++.+.+++.+... .++... .. ...+. . .+|.+ .+
T Consensus 7 ~KI~IIG-aG~vG~~ia~~la~~gl---~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~-~-~~d~~--------~l 72 (321)
T PTZ00082 7 RKISLIG-SGNIGGVMAYLIVLKNL---GDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVI-G-TNNYE--------DI 72 (321)
T ss_pred CEEEEEC-CCHHHHHHHHHHHhCCC---CeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEE-E-CCCHH--------Hh
Confidence 4678888 57899999999998883 4799999998864321 111111 11 11111 0 01111 12
Q ss_pred hhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecC
Q psy11190 77 SDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSI 156 (248)
Q Consensus 77 ~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~ 156 (248)
. +.|++|.++|....... .+.+.+. ...+..| ..+.+.+.+.+.+.. +++.++++|.+
T Consensus 73 ~------~aDiVI~tag~~~~~~~-~~~~~~r-~~~l~~n----~~i~~~i~~~i~~~~----------p~a~~iv~sNP 130 (321)
T PTZ00082 73 A------GSDVVIVTAGLTKRPGK-SDKEWNR-DDLLPLN----AKIMDEVAEGIKKYC----------PNAFVIVITNP 130 (321)
T ss_pred C------CCCEEEECCCCCCCCCC-CcCCCCH-HHHHHHH----HHHHHHHHHHHHHHC----------CCeEEEEecCc
Confidence 2 38999999997543111 1111111 2223333 446777777777653 56788998877
Q ss_pred CCc
Q psy11190 157 MGS 159 (248)
Q Consensus 157 ~~~ 159 (248)
...
T Consensus 131 ~di 133 (321)
T PTZ00082 131 LDV 133 (321)
T ss_pred HHH
Confidence 643
|
|
| >PTZ00117 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.064 Score=46.23 Aligned_cols=121 Identities=18% Similarity=0.201 Sum_probs=69.2
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHH-HHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELL-ALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
+.+.|+|+ |.+|..++..++..|. ..|++.+.+.+.++... ++.. ..........+....+ .. .+
T Consensus 6 ~KI~IIGa-G~vG~~ia~~l~~~~~---~~l~L~Di~~~~~~g~~lDl~~-~~~~~~~~~~i~~~~d--------~~-~l 71 (319)
T PTZ00117 6 KKISMIGA-GQIGSTVALLILQKNL---GDVVLYDVIKGVPQGKALDLKH-FSTLVGSNINILGTNN--------YE-DI 71 (319)
T ss_pred cEEEEECC-CHHHHHHHHHHHHCCC---CeEEEEECCCccchhHHHHHhh-hccccCCCeEEEeCCC--------HH-Hh
Confidence 35788897 8899999999998883 57999999887654321 1111 1110000011111111 11 11
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
. +.|++|.++|.... ...+.. ..+..|. -+.+.+.+.+.+.. +++.++++|.+...
T Consensus 72 ~--~ADiVVitag~~~~----~g~~r~---dll~~n~----~i~~~i~~~i~~~~----------p~a~vivvsNP~di 127 (319)
T PTZ00117 72 K--DSDVVVITAGVQRK----EEMTRE---DLLTING----KIMKSVAESVKKYC----------PNAFVICVTNPLDC 127 (319)
T ss_pred C--CCCEEEECCCCCCC----CCCCHH---HHHHHHH----HHHHHHHHHHHHHC----------CCeEEEEecChHHH
Confidence 1 38999999986432 122322 2333343 56677777777653 57778888876643
|
|
| >COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.96 E-value=0.034 Score=46.95 Aligned_cols=76 Identities=22% Similarity=0.314 Sum_probs=52.5
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
+.++|.| +||.+++++..|++.|+ .+++++.|+.++++++.+....... .....+..+.+. ..
T Consensus 127 ~~vlilG-AGGAarAv~~aL~~~g~---~~i~V~NRt~~ra~~La~~~~~~~~-~~~~~~~~~~~~-~~----------- 189 (283)
T COG0169 127 KRVLILG-AGGAARAVAFALAEAGA---KRITVVNRTRERAEELADLFGELGA-AVEAAALADLEG-LE----------- 189 (283)
T ss_pred CEEEEEC-CcHHHHHHHHHHHHcCC---CEEEEEeCCHHHHHHHHHHhhhccc-cccccccccccc-cc-----------
Confidence 4567765 57899999999999996 7899999999999998766654332 111222323222 00
Q ss_pred CCCccEEEeccccCC
Q psy11190 82 DQGLNVLVNNAGIAA 96 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~ 96 (248)
..|+|||+....-
T Consensus 190 --~~dliINaTp~Gm 202 (283)
T COG0169 190 --EADLLINATPVGM 202 (283)
T ss_pred --ccCEEEECCCCCC
Confidence 1799999986553
|
|
| >COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.042 Score=46.90 Aligned_cols=119 Identities=18% Similarity=0.259 Sum_probs=70.9
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH-HHHHhh---cCCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL-LALAQQ---HSNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~-~~~~~~---~~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
.+.|+|+ |++|.+++..|+.++. +..+++.+.+.+.++-. .++... ...-..+..| .+.+. +.
T Consensus 2 KVaviGa-G~VG~s~a~~l~~~~~--~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~-~~y~~--------~~- 68 (313)
T COG0039 2 KVAVIGA-GNVGSSLAFLLLLQGL--GSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGD-GDYED--------LK- 68 (313)
T ss_pred eEEEECC-ChHHHHHHHHHhcccc--cceEEEEEcccccccchhcchhhcchhccCceEEecC-CChhh--------hc-
Confidence 4778899 9999999999998884 34999999996554432 122111 0000111121 11111 12
Q ss_pred hhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 79 VVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
+.|++|..||....+. ++.+++.. ....+.+.+.+.+.+.. +++.++.+|.+..
T Consensus 69 -----~aDiVvitAG~prKpG----mtR~DLl~-------~Na~I~~~i~~~i~~~~----------~d~ivlVvtNPvD 122 (313)
T COG0039 69 -----GADIVVITAGVPRKPG----MTRLDLLE-------KNAKIVKDIAKAIAKYA----------PDAIVLVVTNPVD 122 (313)
T ss_pred -----CCCEEEEeCCCCCCCC----CCHHHHHH-------hhHHHHHHHHHHHHhhC----------CCeEEEEecCcHH
Confidence 3899999999865422 34444332 33445666666666543 5788899888765
Q ss_pred cc
Q psy11190 159 SI 160 (248)
Q Consensus 159 ~~ 160 (248)
..
T Consensus 123 ~~ 124 (313)
T COG0039 123 IL 124 (313)
T ss_pred HH
Confidence 43
|
|
| >cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.04 Score=47.52 Aligned_cols=79 Identities=10% Similarity=0.194 Sum_probs=50.5
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
.+++|+|++|++|..++..+...| .+|+.++++.++.+.+.+.... . .+ .|..+.++ .... +.+..+
T Consensus 153 ~~VlI~Ga~G~vG~~aiqlAk~~G----~~Vi~~~~~~~~~~~~~~~lGa--~-~v--i~~~~~~~-~~~~---i~~~~~ 219 (338)
T cd08295 153 ETVFVSAASGAVGQLVGQLAKLKG----CYVVGSAGSDEKVDLLKNKLGF--D-DA--FNYKEEPD-LDAA---LKRYFP 219 (338)
T ss_pred CEEEEecCccHHHHHHHHHHHHcC----CEEEEEeCCHHHHHHHHHhcCC--c-ee--EEcCCccc-HHHH---HHHhCC
Confidence 479999999999999998888888 8899999887776655442211 1 11 23222222 2222 222223
Q ss_pred CCCccEEEecccc
Q psy11190 82 DQGLNVLVNNAGI 94 (248)
Q Consensus 82 ~~~iD~lv~~ag~ 94 (248)
.++|+++.+.|.
T Consensus 220 -~gvd~v~d~~g~ 231 (338)
T cd08295 220 -NGIDIYFDNVGG 231 (338)
T ss_pred -CCcEEEEECCCH
Confidence 259999988763
|
This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in |
| >PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.04 Score=42.53 Aligned_cols=69 Identities=22% Similarity=0.226 Sum_probs=45.3
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhh--------cCCceeEEeeccCCchhhhhH
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQ--------HSNLHVIELDVTDFSKQQDVL 72 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~--------~~~~~~~~~D~~~~~~~v~~~ 72 (248)
|+++-|.|- |-+|..+|+.|+++| +.|.+.+|++++.+++.+.... -....++-.-+.+.+. ++.+
T Consensus 1 m~~Ig~IGl-G~mG~~~a~~L~~~g----~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~-v~~v 74 (163)
T PF03446_consen 1 MMKIGFIGL-GNMGSAMARNLAKAG----YEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDA-VEAV 74 (163)
T ss_dssp -BEEEEE---SHHHHHHHHHHHHTT----TEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHH-HHHH
T ss_pred CCEEEEEch-HHHHHHHHHHHHhcC----CeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchh-hhhh
Confidence 677777776 799999999999999 9999999999887776432100 0122444455555555 5665
Q ss_pred HHH
Q psy11190 73 FKD 75 (248)
Q Consensus 73 ~~~ 75 (248)
+..
T Consensus 75 ~~~ 77 (163)
T PF03446_consen 75 LFG 77 (163)
T ss_dssp HHC
T ss_pred hhh
Confidence 555
|
1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A .... |
| >TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase | Back alignment and domain information |
|---|
Probab=95.89 E-value=0.037 Score=47.46 Aligned_cols=78 Identities=13% Similarity=0.221 Sum_probs=49.9
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
.++||+|++|++|..++..+...| .+|+.++++.++.+.+.++ +.. . ..|..+.+. .....+... +
T Consensus 140 ~~VLI~ga~g~vG~~aiqlAk~~G----~~Vi~~~~s~~~~~~~~~l---Ga~-~--vi~~~~~~~-~~~~~~~~~---~ 205 (325)
T TIGR02825 140 ETVMVNAAAGAVGSVVGQIAKLKG----CKVVGAAGSDEKVAYLKKL---GFD-V--AFNYKTVKS-LEETLKKAS---P 205 (325)
T ss_pred CEEEEeCCccHHHHHHHHHHHHcC----CEEEEEeCCHHHHHHHHHc---CCC-E--EEecccccc-HHHHHHHhC---C
Confidence 479999999999999988888888 8899999887765554332 111 1 123333223 333322222 2
Q ss_pred CCCccEEEecccc
Q psy11190 82 DQGLNVLVNNAGI 94 (248)
Q Consensus 82 ~~~iD~lv~~ag~ 94 (248)
.++|+++.+.|.
T Consensus 206 -~gvdvv~d~~G~ 217 (325)
T TIGR02825 206 -DGYDCYFDNVGG 217 (325)
T ss_pred -CCeEEEEECCCH
Confidence 259999988763
|
Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase. |
| >cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=95.81 E-value=0.034 Score=47.42 Aligned_cols=40 Identities=33% Similarity=0.590 Sum_probs=34.5
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL 45 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~ 45 (248)
.+++|+|+++++|+++++.+...| .+|+.+.++.++.+.+
T Consensus 164 ~~vlI~ga~g~vG~~~~~~a~~~g----~~v~~~~~~~~~~~~~ 203 (332)
T cd08259 164 DTVLVTGAGGGVGIHAIQLAKALG----ARVIAVTRSPEKLKIL 203 (332)
T ss_pred CEEEEECCCCHHHHHHHHHHHHcC----CeEEEEeCCHHHHHHH
Confidence 479999999999999999999999 8899999887665444
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. |
| >cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E | Back alignment and domain information |
|---|
Probab=95.77 E-value=0.13 Score=42.22 Aligned_cols=39 Identities=15% Similarity=0.120 Sum_probs=29.8
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL 45 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~ 45 (248)
+++|.| .||+|.++++.|++.|. .++++++.+.=...++
T Consensus 13 ~VlVvG-~GGvGs~va~~Lar~GV---g~i~LvD~D~V~~sNl 51 (231)
T cd00755 13 HVAVVG-LGGVGSWAAEALARSGV---GKLTLIDFDVVCVSNL 51 (231)
T ss_pred CEEEEC-CCHHHHHHHHHHHHcCC---CEEEEECCCEECchhh
Confidence 456664 57999999999999996 6899998875443333
|
coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >PRK14968 putative methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=95.68 E-value=0.23 Score=38.74 Aligned_cols=74 Identities=18% Similarity=0.172 Sum_probs=47.6
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcC--C--ceeEEeeccCCchhhhhHHHHhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHS--N--LHVIELDVTDFSKQQDVLFKDIS 77 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~--~--~~~~~~D~~~~~~~v~~~~~~i~ 77 (248)
+++|-.|++.|. ++..|++++ .+|+.++.+++..+...+.....+ + +.++.+|+.+.. .
T Consensus 25 ~~vLd~G~G~G~---~~~~l~~~~----~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~----------~ 87 (188)
T PRK14968 25 DRVLEVGTGSGI---VAIVAAKNG----KKVVGVDINPYAVECAKCNAKLNNIRNNGVEVIRSDLFEPF----------R 87 (188)
T ss_pred CEEEEEccccCH---HHHHHHhhc----ceEEEEECCHHHHHHHHHHHHHcCCCCcceEEEeccccccc----------c
Confidence 467888888776 556666667 899999999877666533322211 2 677777764421 1
Q ss_pred hhhcCCCccEEEeccccCC
Q psy11190 78 DVVKDQGLNVLVNNAGIAA 96 (248)
Q Consensus 78 ~~~~~~~iD~lv~~ag~~~ 96 (248)
+ ..+|.++.|.....
T Consensus 88 ~----~~~d~vi~n~p~~~ 102 (188)
T PRK14968 88 G----DKFDVILFNPPYLP 102 (188)
T ss_pred c----cCceEEEECCCcCC
Confidence 1 13899999876543
|
|
| >cd08293 PTGR2 Prostaglandin reductase | Back alignment and domain information |
|---|
Probab=95.63 E-value=0.058 Score=46.53 Aligned_cols=78 Identities=14% Similarity=0.240 Sum_probs=49.9
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCc-eEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPA-HIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
.+++|+|++|++|..++..+...| + +|+.++++.++.+.+.+... .. . ..|..+. + .... +.+..
T Consensus 156 ~~VlI~ga~g~vG~~aiqlAk~~G----~~~Vi~~~~s~~~~~~~~~~lG--a~-~--vi~~~~~-~-~~~~---i~~~~ 221 (345)
T cd08293 156 QTMVVSGAAGACGSLAGQIGRLLG----CSRVVGICGSDEKCQLLKSELG--FD-A--AINYKTD-N-VAER---LRELC 221 (345)
T ss_pred CEEEEECCCcHHHHHHHHHHHHcC----CCEEEEEcCCHHHHHHHHHhcC--Cc-E--EEECCCC-C-HHHH---HHHHC
Confidence 489999999999999988887778 7 79999988777665543221 11 1 1233322 2 2222 22222
Q ss_pred cCCCccEEEecccc
Q psy11190 81 KDQGLNVLVNNAGI 94 (248)
Q Consensus 81 ~~~~iD~lv~~ag~ 94 (248)
+ .++|+++.+.|.
T Consensus 222 ~-~gvd~vid~~g~ 234 (345)
T cd08293 222 P-EGVDVYFDNVGG 234 (345)
T ss_pred C-CCceEEEECCCc
Confidence 3 259999988763
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid |
| >TIGR00518 alaDH alanine dehydrogenase | Back alignment and domain information |
|---|
Probab=95.59 E-value=0.08 Score=46.60 Aligned_cols=74 Identities=24% Similarity=0.246 Sum_probs=48.2
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
++++|.|+ |.+|+.+++.|...| ++|++++|+.++++.+.... +. .+..+..+.+. + .+...
T Consensus 168 ~~VlViGa-G~vG~~aa~~a~~lG----a~V~v~d~~~~~~~~l~~~~---g~--~v~~~~~~~~~----l----~~~l~ 229 (370)
T TIGR00518 168 GDVTIIGG-GVVGTNAAKMANGLG----ATVTILDINIDRLRQLDAEF---GG--RIHTRYSNAYE----I----EDAVK 229 (370)
T ss_pred ceEEEEcC-CHHHHHHHHHHHHCC----CeEEEEECCHHHHHHHHHhc---Cc--eeEeccCCHHH----H----HHHHc
Confidence 35788877 789999999999999 78999999887765543322 11 12223333222 2 22223
Q ss_pred CCCccEEEeccccC
Q psy11190 82 DQGLNVLVNNAGIA 95 (248)
Q Consensus 82 ~~~iD~lv~~ag~~ 95 (248)
..|++|++++..
T Consensus 230 --~aDvVI~a~~~~ 241 (370)
T TIGR00518 230 --RADLLIGAVLIP 241 (370)
T ss_pred --cCCEEEEccccC
Confidence 389999998653
|
The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP. |
| >TIGR01915 npdG NADPH-dependent F420 reductase | Back alignment and domain information |
|---|
Probab=95.58 E-value=0.028 Score=45.67 Aligned_cols=41 Identities=32% Similarity=0.392 Sum_probs=35.9
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHH
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELL 46 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~ 46 (248)
|| +.|.||+|.+|.++++.|+++| +.|.+.+|++++.+.+.
T Consensus 1 Mk-I~IIGG~G~mG~ala~~L~~~G----~~V~v~~r~~~~~~~l~ 41 (219)
T TIGR01915 1 MK-IAVLGGTGDQGKGLALRLAKAG----NKIIIGSRDLEKAEEAA 41 (219)
T ss_pred CE-EEEEcCCCHHHHHHHHHHHhCC----CEEEEEEcCHHHHHHHH
Confidence 54 7888999999999999999999 89999999988876653
|
This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase. |
| >COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.53 E-value=0.063 Score=43.83 Aligned_cols=74 Identities=22% Similarity=0.273 Sum_probs=51.9
Q ss_pred EEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhcCC
Q psy11190 4 ILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVKDQ 83 (248)
Q Consensus 4 ~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~~~ 83 (248)
++|. |.|-.|..+|+.|.++| +.|++++++++..++... .....+.+.+|.++.+. .++ . |-.
T Consensus 3 iiIi-G~G~vG~~va~~L~~~g----~~Vv~Id~d~~~~~~~~~---~~~~~~~v~gd~t~~~~-L~~-------a-gi~ 65 (225)
T COG0569 3 IIII-GAGRVGRSVARELSEEG----HNVVLIDRDEERVEEFLA---DELDTHVVIGDATDEDV-LEE-------A-GID 65 (225)
T ss_pred EEEE-CCcHHHHHHHHHHHhCC----CceEEEEcCHHHHHHHhh---hhcceEEEEecCCCHHH-HHh-------c-CCC
Confidence 4444 55779999999999999 999999999988666322 12356788888888665 222 2 222
Q ss_pred CccEEEecccc
Q psy11190 84 GLNVLVNNAGI 94 (248)
Q Consensus 84 ~iD~lv~~ag~ 94 (248)
..|++|...|.
T Consensus 66 ~aD~vva~t~~ 76 (225)
T COG0569 66 DADAVVAATGN 76 (225)
T ss_pred cCCEEEEeeCC
Confidence 47888777664
|
|
| >PLN03154 putative allyl alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.50 E-value=0.069 Score=46.45 Aligned_cols=78 Identities=12% Similarity=0.210 Sum_probs=49.1
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
.+++|+|++|++|..++..+...| ++|+.++++.++.+.+.+... .. . ..|..+.++ .... +.+..+
T Consensus 160 ~~VlV~GaaG~vG~~aiqlAk~~G----~~Vi~~~~~~~k~~~~~~~lG--a~-~--vi~~~~~~~-~~~~---i~~~~~ 226 (348)
T PLN03154 160 DSVFVSAASGAVGQLVGQLAKLHG----CYVVGSAGSSQKVDLLKNKLG--FD-E--AFNYKEEPD-LDAA---LKRYFP 226 (348)
T ss_pred CEEEEecCccHHHHHHHHHHHHcC----CEEEEEcCCHHHHHHHHHhcC--CC-E--EEECCCccc-HHHH---HHHHCC
Confidence 479999999999999988888888 889998888776554432221 11 1 123332222 2222 222223
Q ss_pred CCCccEEEeccc
Q psy11190 82 DQGLNVLVNNAG 93 (248)
Q Consensus 82 ~~~iD~lv~~ag 93 (248)
.++|+++.+.|
T Consensus 227 -~gvD~v~d~vG 237 (348)
T PLN03154 227 -EGIDIYFDNVG 237 (348)
T ss_pred -CCcEEEEECCC
Confidence 25999998876
|
|
| >COG2085 Predicted dinucleotide-binding enzymes [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.47 E-value=0.034 Score=44.55 Aligned_cols=38 Identities=21% Similarity=0.204 Sum_probs=30.7
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHH
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAV 43 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~ 43 (248)
||++.| ||+|.||.+++++|++.| +.|++..|+.++..
T Consensus 1 m~~~~i-~GtGniG~alA~~~a~ag----~eV~igs~r~~~~~ 38 (211)
T COG2085 1 MMIIAI-IGTGNIGSALALRLAKAG----HEVIIGSSRGPKAL 38 (211)
T ss_pred CcEEEE-eccChHHHHHHHHHHhCC----CeEEEecCCChhHH
Confidence 665555 788999999999999999 99999966655433
|
|
| >TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family | Back alignment and domain information |
|---|
Probab=95.47 E-value=0.055 Score=45.73 Aligned_cols=78 Identities=19% Similarity=0.392 Sum_probs=49.7
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
++++|+|+++++|..+++.+...| ++|+++.++.+..+.+.+ . + +..+ .+....+ +.+.+.+..+
T Consensus 141 ~~vlv~g~~~~~g~~~~~~a~~~g----~~v~~~~~~~~~~~~~~~-~---g-~~~~-~~~~~~~-----~~~~~~~~~~ 205 (325)
T TIGR02824 141 ETVLIHGGASGIGTTAIQLAKAFG----ARVFTTAGSDEKCAACEA-L---G-ADIA-INYREED-----FVEVVKAETG 205 (325)
T ss_pred CEEEEEcCcchHHHHHHHHHHHcC----CEEEEEeCCHHHHHHHHH-c---C-CcEE-EecCchh-----HHHHHHHHcC
Confidence 478999999999999999999999 889999988766553321 1 1 1111 2222212 2222333332
Q ss_pred CCCccEEEecccc
Q psy11190 82 DQGLNVLVNNAGI 94 (248)
Q Consensus 82 ~~~iD~lv~~ag~ 94 (248)
..++|.+++++|.
T Consensus 206 ~~~~d~~i~~~~~ 218 (325)
T TIGR02824 206 GKGVDVILDIVGG 218 (325)
T ss_pred CCCeEEEEECCch
Confidence 2259999998873
|
Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized. |
| >cd00300 LDH_like L-lactate dehydrogenase-like enzymes | Back alignment and domain information |
|---|
Probab=95.45 E-value=0.2 Score=42.72 Aligned_cols=119 Identities=18% Similarity=0.191 Sum_probs=71.1
Q ss_pred EEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHH-HHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhcCC
Q psy11190 5 LITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELL-ALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVKDQ 83 (248)
Q Consensus 5 lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~~~ 83 (248)
.|.|+ |++|..++..|+.+|. ...+++++.+.+.++... ++..............++. .+.+.
T Consensus 2 ~iiGa-G~VG~~~a~~l~~~~~--~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~~~-------~~~l~------ 65 (300)
T cd00300 2 TIIGA-GNVGAAVAFALIAKGL--ASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRGGD-------YADAA------ 65 (300)
T ss_pred EEECC-CHHHHHHHHHHHhcCC--CCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEECCC-------HHHhC------
Confidence 46676 6799999999998883 357999999988766552 3322111100001111110 01122
Q ss_pred CccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 84 GLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 84 ~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+.|++|.++|.... + ..+..++ +....-+.+.+.+.+.+.. +++.++++|.+....
T Consensus 66 ~aDiVIitag~p~~--~--~~~R~~l-------~~~n~~i~~~~~~~i~~~~----------p~~~viv~sNP~d~~ 121 (300)
T cd00300 66 DADIVVITAGAPRK--P--GETRLDL-------INRNAPILRSVITNLKKYG----------PDAIILVVSNPVDIL 121 (300)
T ss_pred CCCEEEEcCCCCCC--C--CCCHHHH-------HHHHHHHHHHHHHHHHHhC----------CCeEEEEccChHHHH
Confidence 38999999997532 1 2233222 2245567777778777753 688999999776443
|
Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot |
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=95.39 E-value=0.061 Score=48.42 Aligned_cols=56 Identities=13% Similarity=0.197 Sum_probs=41.1
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFS 66 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 66 (248)
+.++|.|+ |.+|+.+++.|.++| ..|++++++.+..+++.+ ...+.++.+|.++..
T Consensus 1 m~viIiG~-G~ig~~~a~~L~~~g----~~v~vid~~~~~~~~~~~----~~~~~~~~gd~~~~~ 56 (453)
T PRK09496 1 MKIIIVGA-GQVGYTLAENLSGEN----NDVTVIDTDEERLRRLQD----RLDVRTVVGNGSSPD 56 (453)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCC----CcEEEEECCHHHHHHHHh----hcCEEEEEeCCCCHH
Confidence 14777787 999999999999999 899999999887665532 123455566665543
|
|
| >TIGR01771 L-LDH-NAD L-lactate dehydrogenase | Back alignment and domain information |
|---|
Probab=95.29 E-value=0.18 Score=42.97 Aligned_cols=117 Identities=18% Similarity=0.186 Sum_probs=69.6
Q ss_pred ecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH-HHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhcCCCc
Q psy11190 7 TGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL-LALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVKDQGL 85 (248)
Q Consensus 7 tGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~~~~i 85 (248)
.| .|.+|..+|..|+.++ ....+++++.+.+.++.. .++..... .......++. .. . +.+. ..
T Consensus 2 IG-aG~VG~~~a~~l~~~~--l~~el~L~Di~~~~~~g~a~Dl~~~~~-~~~~~~~i~~-~~-~--------~~~~--da 65 (299)
T TIGR01771 2 IG-AGNVGSSTAFALLNQG--IADEIVLIDINKDKAEGEAMDLQHAAS-FLPTPKKIRS-GD-Y--------SDCK--DA 65 (299)
T ss_pred CC-cCHHHHHHHHHHHhcC--CCCEEEEEeCCCChhhHHHHHHHHhhc-ccCCCeEEec-CC-H--------HHHC--CC
Confidence 45 5899999999999888 345799999988765554 33332111 0001112221 11 0 1112 38
Q ss_pred cEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 86 NVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 86 D~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
|++|..||.... + ..+..++ +....-+.+.+.+.+.+.. +++.++++|.+....
T Consensus 66 DivVitag~~rk--~--g~~R~dl-------l~~N~~i~~~~~~~i~~~~----------p~~~vivvsNP~d~~ 119 (299)
T TIGR01771 66 DLVVITAGAPQK--P--GETRLEL-------VGRNVRIMKSIVPEVVKSG----------FDGIFLVATNPVDIL 119 (299)
T ss_pred CEEEECCCCCCC--C--CCCHHHH-------HHHHHHHHHHHHHHHHHhC----------CCeEEEEeCCHHHHH
Confidence 999999997532 1 2333332 2245566777777777653 688999999876443
|
This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases. |
| >PF10100 DUF2338: Uncharacterized protein conserved in bacteria (DUF2338); InterPro: IPR016935 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=95.29 E-value=0.19 Score=44.19 Aligned_cols=144 Identities=15% Similarity=0.220 Sum_probs=94.8
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCch-------hhhhHH
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSK-------QQDVLF 73 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-------~v~~~~ 73 (248)
|+.+||.| +|-.+..+|..|-+.+. ++|-+.+|...+.+.+.+.....+ ..++.++.+... .++.++
T Consensus 1 m~~VLI~G-tGPvAiQLAv~lk~~~~---~~vGi~~R~S~rSq~f~~aL~~~~--~~~~v~vqn~~h~~l~G~~~id~~~ 74 (429)
T PF10100_consen 1 MGNVLIVG-TGPVAIQLAVILKKHGN---CRVGIVGRESVRSQRFFEALARSD--GLFEVSVQNEQHQALSGECTIDHVF 74 (429)
T ss_pred CCceEEEc-CCHHHHHHHHHHHhccC---ceeeeecCcchhHHHHHHHHHhCC--CEEEEeecchhhhhhcCeEEhhHhh
Confidence 78888886 57788889998888785 789999998888777754444332 223334333221 277788
Q ss_pred HHhhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEe
Q psy11190 74 KDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNV 153 (248)
Q Consensus 74 ~~i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~v 153 (248)
+...+..| ..|.||.+..--.....+.+++++.+.+.=.+=+.++.+-++.+++-+..... ...-||.+
T Consensus 75 ~~~~~i~g--~WdtlILavtaDAY~~VL~ql~~~~L~~vk~iVLvSPtfGS~~lv~~~l~~~~---------~~~EVISF 143 (429)
T PF10100_consen 75 QDYEEIEG--EWDTLILAVTADAYLDVLQQLPWEVLKRVKSIVLVSPTFGSHLLVKGFLNDLG---------PDAEVISF 143 (429)
T ss_pred cCHHHhcc--cccEEEEEechHHHHHHHHhcCHHHHhhCCEEEEECcccchHHHHHHHHHhcC---------CCceEEEe
Confidence 88888877 49999888654333355677888888776666666776666555555443211 24567777
Q ss_pred ecCCCccc
Q psy11190 154 SSIMGSIE 161 (248)
Q Consensus 154 ss~~~~~~ 161 (248)
|+=.|...
T Consensus 144 StY~gdTr 151 (429)
T PF10100_consen 144 STYYGDTR 151 (429)
T ss_pred ecccccce
Confidence 77555443
|
|
| >cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity | Back alignment and domain information |
|---|
Probab=95.12 E-value=0.1 Score=44.50 Aligned_cols=77 Identities=14% Similarity=0.292 Sum_probs=50.0
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
.+++|+||+|++|..++..+...| .+|+.++++.++.+.+.++ + +.. ..|..+.+. .+. +.+..+
T Consensus 145 ~~vlI~ga~g~vG~~aiqlA~~~G----~~vi~~~~s~~~~~~l~~~---G--a~~-vi~~~~~~~-~~~----v~~~~~ 209 (329)
T cd08294 145 ETVVVNGAAGAVGSLVGQIAKIKG----CKVIGCAGSDDKVAWLKEL---G--FDA-VFNYKTVSL-EEA----LKEAAP 209 (329)
T ss_pred CEEEEecCccHHHHHHHHHHHHcC----CEEEEEeCCHHHHHHHHHc---C--CCE-EEeCCCccH-HHH----HHHHCC
Confidence 479999999999999988888888 8899999888776655432 1 111 133333222 222 222223
Q ss_pred CCCccEEEecccc
Q psy11190 82 DQGLNVLVNNAGI 94 (248)
Q Consensus 82 ~~~iD~lv~~ag~ 94 (248)
.++|+++.+.|.
T Consensus 210 -~gvd~vld~~g~ 221 (329)
T cd08294 210 -DGIDCYFDNVGG 221 (329)
T ss_pred -CCcEEEEECCCH
Confidence 259999988763
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac |
| >PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus | Back alignment and domain information |
|---|
Probab=95.09 E-value=0.067 Score=38.46 Aligned_cols=71 Identities=21% Similarity=0.229 Sum_probs=49.7
Q ss_pred EEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhcCC
Q psy11190 4 ILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVKDQ 83 (248)
Q Consensus 4 ~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~~~ 83 (248)
++|.|. +.+|+.+++.|.+.+ ..|++++++++..+++.+. .+.++.+|.++.+. .+++ .+ .
T Consensus 1 vvI~G~-g~~~~~i~~~L~~~~----~~vvvid~d~~~~~~~~~~-----~~~~i~gd~~~~~~-l~~a--~i----~-- 61 (116)
T PF02254_consen 1 VVIIGY-GRIGREIAEQLKEGG----IDVVVIDRDPERVEELREE-----GVEVIYGDATDPEV-LERA--GI----E-- 61 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTT----SEEEEEESSHHHHHHHHHT-----TSEEEES-TTSHHH-HHHT--TG----G--
T ss_pred eEEEcC-CHHHHHHHHHHHhCC----CEEEEEECCcHHHHHHHhc-----ccccccccchhhhH-Hhhc--Cc----c--
Confidence 456666 579999999999966 7999999998875554322 37789999998776 3332 11 1
Q ss_pred CccEEEeccc
Q psy11190 84 GLNVLVNNAG 93 (248)
Q Consensus 84 ~iD~lv~~ag 93 (248)
+.|.+|....
T Consensus 62 ~a~~vv~~~~ 71 (116)
T PF02254_consen 62 KADAVVILTD 71 (116)
T ss_dssp CESEEEEESS
T ss_pred ccCEEEEccC
Confidence 3777777764
|
The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A .... |
| >PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional | Back alignment and domain information |
|---|
Probab=95.07 E-value=0.33 Score=44.52 Aligned_cols=40 Identities=25% Similarity=0.261 Sum_probs=32.5
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHH
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA 47 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~ 47 (248)
+++|+|+ |.+|...+..+...| +.|+++++++++++..++
T Consensus 167 kVlViGa-G~iGL~Ai~~Ak~lG----A~V~a~D~~~~rle~aes 206 (509)
T PRK09424 167 KVLVIGA-GVAGLAAIGAAGSLG----AIVRAFDTRPEVAEQVES 206 (509)
T ss_pred EEEEECC-cHHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHH
Confidence 5777764 789999999888889 789999999888776554
|
|
| >KOG1198|consensus | Back alignment and domain information |
|---|
Probab=95.05 E-value=0.091 Score=45.81 Aligned_cols=79 Identities=24% Similarity=0.315 Sum_probs=50.3
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
+.+||.||+||.|.+.++-....| ...+++.++.++.+-..++.. -...|..+++- ++. +.+..+
T Consensus 159 ~~vLv~ggsggVG~~aiQlAk~~~----~~~v~t~~s~e~~~l~k~lGA------d~vvdy~~~~~-~e~----~kk~~~ 223 (347)
T KOG1198|consen 159 KSVLVLGGSGGVGTAAIQLAKHAG----AIKVVTACSKEKLELVKKLGA------DEVVDYKDENV-VEL----IKKYTG 223 (347)
T ss_pred CeEEEEeCCcHHHHHHHHHHHhcC----CcEEEEEcccchHHHHHHcCC------cEeecCCCHHH-HHH----HHhhcC
Confidence 579999999999999888777777 456666666666554333321 12356666332 222 333221
Q ss_pred CCCccEEEeccccCC
Q psy11190 82 DQGLNVLVNNAGIAA 96 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~ 96 (248)
.++|+|+-+.|...
T Consensus 224 -~~~DvVlD~vg~~~ 237 (347)
T KOG1198|consen 224 -KGVDVVLDCVGGST 237 (347)
T ss_pred -CCccEEEECCCCCc
Confidence 25999999998753
|
|
| >cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=95.01 E-value=0.088 Score=44.51 Aligned_cols=40 Identities=35% Similarity=0.534 Sum_probs=34.7
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL 45 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~ 45 (248)
++++|+|+++++|.+++..+...| ..|+.++++.++.+.+
T Consensus 146 ~~vli~g~~~~~g~~~~~~~~~~g----~~v~~~~~~~~~~~~~ 185 (328)
T cd08268 146 DSVLITAASSSVGLAAIQIANAAG----ATVIATTRTSEKRDAL 185 (328)
T ss_pred CEEEEecCccHHHHHHHHHHHHcC----CEEEEEcCCHHHHHHH
Confidence 478999999999999999999999 8999999887665544
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >COG2130 Putative NADP-dependent oxidoreductases [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.01 E-value=0.086 Score=44.56 Aligned_cols=78 Identities=12% Similarity=0.170 Sum_probs=53.7
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
.|++|++|+|..|.-+..----+| ++|+.+.-..++..-+.+.+.-. .-.|.-.. .+.+.+.+.++
T Consensus 152 etvvVSaAaGaVGsvvgQiAKlkG----~rVVGiaGg~eK~~~l~~~lGfD-----~~idyk~~-----d~~~~L~~a~P 217 (340)
T COG2130 152 ETVVVSAAAGAVGSVVGQIAKLKG----CRVVGIAGGAEKCDFLTEELGFD-----AGIDYKAE-----DFAQALKEACP 217 (340)
T ss_pred CEEEEEecccccchHHHHHHHhhC----CeEEEecCCHHHHHHHHHhcCCc-----eeeecCcc-----cHHHHHHHHCC
Confidence 489999999999987655555567 99999999988877665543211 12333332 23344566666
Q ss_pred CCCccEEEecccc
Q psy11190 82 DQGLNVLVNNAGI 94 (248)
Q Consensus 82 ~~~iD~lv~~ag~ 94 (248)
+ +||+.|-|.|.
T Consensus 218 ~-GIDvyfeNVGg 229 (340)
T COG2130 218 K-GIDVYFENVGG 229 (340)
T ss_pred C-CeEEEEEcCCc
Confidence 5 69999999985
|
|
| >TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit | Back alignment and domain information |
|---|
Probab=94.96 E-value=0.26 Score=45.12 Aligned_cols=79 Identities=19% Similarity=0.241 Sum_probs=51.9
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccC-------------Cchhh
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTD-------------FSKQQ 69 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-------------~~~~v 69 (248)
+++|.|+ |.+|...+..+...| +.|++++++.++++...++ ...++..|..+ .+. .
T Consensus 166 kVlViGa-G~iGl~Aa~~ak~lG----A~V~v~d~~~~rle~a~~l-----Ga~~v~v~~~e~g~~~~gYa~~~s~~~-~ 234 (511)
T TIGR00561 166 KVLVIGA-GVAGLAAIGAANSLG----AIVRAFDTRPEVKEQVQSM-----GAEFLELDFKEEGGSGDGYAKVMSEEF-I 234 (511)
T ss_pred EEEEECC-CHHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHc-----CCeEEeccccccccccccceeecCHHH-H
Confidence 6888885 899999999999999 7899999998876554432 22334444321 111 3
Q ss_pred hhHHHHhhhhhcCCCccEEEecccc
Q psy11190 70 DVLFKDISDVVKDQGLNVLVNNAGI 94 (248)
Q Consensus 70 ~~~~~~i~~~~~~~~iD~lv~~ag~ 94 (248)
+...+.+.+.+. ..|++|+++-+
T Consensus 235 ~~~~~~~~e~~~--~~DIVI~Tali 257 (511)
T TIGR00561 235 AAEMELFAAQAK--EVDIIITTALI 257 (511)
T ss_pred HHHHHHHHHHhC--CCCEEEECccc
Confidence 333334444444 49999999944
|
In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff. |
| >cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase | Back alignment and domain information |
|---|
Probab=94.94 E-value=0.058 Score=43.21 Aligned_cols=40 Identities=18% Similarity=0.325 Sum_probs=34.7
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELL 46 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~ 46 (248)
|+++|+|.+ .+|+.+++.|.+.| ++|++.+++.++.+++.
T Consensus 29 k~v~I~G~G-~vG~~~A~~L~~~G----~~Vvv~D~~~~~~~~~~ 68 (200)
T cd01075 29 KTVAVQGLG-KVGYKLAEHLLEEG----AKLIVADINEEAVARAA 68 (200)
T ss_pred CEEEEECCC-HHHHHHHHHHHHCC----CEEEEEcCCHHHHHHHH
Confidence 689999985 89999999999999 89999999887666553
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc |
| >cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase | Back alignment and domain information |
|---|
Probab=94.92 E-value=0.15 Score=45.33 Aligned_cols=46 Identities=20% Similarity=0.164 Sum_probs=34.0
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLAL 48 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~ 48 (248)
.+++|.|++|++|..++..+...|+ ...+|+++++++++++.+.++
T Consensus 177 ~~VlV~G~~G~vG~~aiq~ak~~G~-g~~~Vi~~~~~~~r~~~a~~~ 222 (410)
T cd08238 177 GNTAILGGAGPMGLMAIDYAIHGPI-GPSLLVVTDVNDERLARAQRL 222 (410)
T ss_pred CEEEEEeCCCHHHHHHHHHHHhccc-CCceEEEEcCCHHHHHHHHHh
Confidence 3689999999999998776665541 013799999998887765543
|
L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found |
| >PRK15076 alpha-galactosidase; Provisional | Back alignment and domain information |
|---|
Probab=94.62 E-value=0.22 Score=44.73 Aligned_cols=136 Identities=11% Similarity=0.108 Sum_probs=72.0
Q ss_pred CceEEEecCCC-chhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcC-Cc-eeEEee-ccCCchhhhhHHHHh
Q psy11190 1 MKSILITGCNR-GLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHS-NL-HVIELD-VTDFSKQQDVLFKDI 76 (248)
Q Consensus 1 ~k~~lVtGas~-giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~-~~-~~~~~D-~~~~~~~v~~~~~~i 76 (248)
|+.+.|.||++ |...++++.++....-.+..|++.+.+.++++....+.+..- .. ...... .+|.
T Consensus 1 ~~KIaIIGaGsvg~~~~~~~~i~~~~~l~~~evvLvDid~er~~~~~~l~~~~~~~~~~~~~i~~ttD~----------- 69 (431)
T PRK15076 1 MPKITFIGAGSTVFTKNLLGDILSVPALRDAEIALMDIDPERLEESEIVARKLAESLGASAKITATTDR----------- 69 (431)
T ss_pred CcEEEEECCCHHHhHHHHHHHHhhCccCCCCEEEEECCCHHHHHHHHHHHHHHHHhcCCCeEEEEECCH-----------
Confidence 55677888877 666666667762222233689999999888764422222110 00 001111 1221
Q ss_pred hhhhcCCCccEEEeccccCCccccCC----CCChhh-h-hheeee-c------chhhHHHHHHHhHHHHhhhhcccCCCC
Q psy11190 77 SDVVKDQGLNVLVNNAGIAAKFTRLG----LLKPEQ-M-TDHFLV-N------VTAPLMLTKTMLPLLKKASEANSAAPL 143 (248)
Q Consensus 77 ~~~~~~~~iD~lv~~ag~~~~~~~~~----~~~~~~-~-~~~~~~-n------~~~~~~l~~~~~~~l~~~~~~~~~~~~ 143 (248)
.+.+. +.|+||..++.... ...+ .++.+. + +...+. . ...++-..+.+.+.+++..
T Consensus 70 ~eal~--dADfVv~ti~vg~~-~~~~~~De~Iplk~G~~~~r~et~G~GG~~~~~r~i~~i~~i~~~i~~~~-------- 138 (431)
T PRK15076 70 REALQ--GADYVINAIQVGGY-EPCTVTDFEIPKKYGLRQTIGDTLGIGGIMRALRTIPVLLDICEDMEEVC-------- 138 (431)
T ss_pred HHHhC--CCCEEeEeeeeCCc-chhhhhhhhhHHHcCCeeecccCcCccchhhhhhhHHHHHHHHHHHHHHC--------
Confidence 12222 38999999997532 1111 111110 0 101111 1 3344446667777777653
Q ss_pred CCCCceEEEeecCCCcc
Q psy11190 144 GSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 144 ~~~~~~iv~vss~~~~~ 160 (248)
+++.++++|.+++..
T Consensus 139 --p~a~iin~tNP~div 153 (431)
T PRK15076 139 --PDALLLNYVNPMAMN 153 (431)
T ss_pred --CCeEEEEcCChHHHH
Confidence 688999999988554
|
|
| >cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins | Back alignment and domain information |
|---|
Probab=94.61 E-value=0.27 Score=41.93 Aligned_cols=119 Identities=18% Similarity=0.213 Sum_probs=66.2
Q ss_pred EEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH-HHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhcCC
Q psy11190 5 LITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL-LALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVKDQ 83 (248)
Q Consensus 5 lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~~~ 83 (248)
.|.|+ |.+|..++..|+.+|. . .|++.+.+++.++.. .++..... .......++...+ .+.+ .
T Consensus 2 ~IIGa-G~vG~~ia~~la~~~l--~-eV~L~Di~e~~~~g~~~dl~~~~~-~~~~~~~I~~t~d-----~~~l----~-- 65 (300)
T cd01339 2 SIIGA-GNVGATLAQLLALKEL--G-DVVLLDIVEGLPQGKALDISQAAP-ILGSDTKVTGTND-----YEDI----A-- 65 (300)
T ss_pred EEECC-CHHHHHHHHHHHhCCC--c-EEEEEeCCCcHHHHHHHHHHHhhh-hcCCCeEEEEcCC-----HHHh----C--
Confidence 57888 8899999999998882 2 999999997654332 11211110 0000011110011 0112 2
Q ss_pred CccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 84 GLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 84 ~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
..|++|.++|.... . ..+..+ . +...+-+.+.+.+.+.+.. +++.++++|.+....
T Consensus 66 dADiVIit~g~p~~---~-~~~r~e---~----~~~n~~i~~~i~~~i~~~~----------p~~~iIv~sNP~di~ 121 (300)
T cd01339 66 GSDVVVITAGIPRK---P-GMSRDD---L----LGTNAKIVKEVAENIKKYA----------PNAIVIVVTNPLDVM 121 (300)
T ss_pred CCCEEEEecCCCCC---c-CCCHHH---H----HHHHHHHHHHHHHHHHHHC----------CCeEEEEecCcHHHH
Confidence 38999999986432 1 122221 1 1124556777777777653 567788888766443
|
Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas |
| >cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=94.53 E-value=0.13 Score=44.15 Aligned_cols=43 Identities=30% Similarity=0.325 Sum_probs=35.3
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLAL 48 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~ 48 (248)
++++|.|+ |.+|..+++.|...|. ..|++++|+.++..++.+.
T Consensus 179 ~~V~ViGa-G~iG~~~a~~L~~~g~---~~V~v~~r~~~ra~~la~~ 221 (311)
T cd05213 179 KKVLVIGA-GEMGELAAKHLAAKGV---AEITIANRTYERAEELAKE 221 (311)
T ss_pred CEEEEECc-HHHHHHHHHHHHHcCC---CEEEEEeCCHHHHHHHHHH
Confidence 46888877 9999999999998774 7899999998887766444
|
Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, |
| >COG4123 Predicted O-methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.50 E-value=0.15 Score=42.10 Aligned_cols=120 Identities=18% Similarity=0.162 Sum_probs=70.2
Q ss_pred eEEEecCC-CchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHH---HHhhcCCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 3 SILITGCN-RGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA---LAQQHSNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 3 ~~lVtGas-~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
+++=.|++ |.+|..++.+.- . ++|+.+.+.++..+...+ +.....++.+++.|+.+... ...
T Consensus 47 ~IlDlGaG~G~l~L~la~r~~--~----a~I~~VEiq~~~a~~A~~nv~ln~l~~ri~v~~~Di~~~~~-~~~------- 112 (248)
T COG4123 47 RILDLGAGNGALGLLLAQRTE--K----AKIVGVEIQEEAAEMAQRNVALNPLEERIQVIEADIKEFLK-ALV------- 112 (248)
T ss_pred eEEEecCCcCHHHHHHhccCC--C----CcEEEEEeCHHHHHHHHHHHHhCcchhceeEehhhHHHhhh-ccc-------
Confidence 34444555 455666666544 2 789999998876665532 22224588999999876544 111
Q ss_pred hhcCCCccEEEeccccCCcccc-CCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeec
Q psy11190 79 VVKDQGLNVLVNNAGIAAKFTR-LGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSS 155 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~~~~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss 155 (248)
..+.|+||+|..+...+.. -.+.-.+..+.....++...+..+..+++ ++|.+.+|..
T Consensus 113 ---~~~fD~Ii~NPPyf~~~~~~~~~~~~~~Ar~e~~~~le~~i~~a~~~lk----------------~~G~l~~V~r 171 (248)
T COG4123 113 ---FASFDLIICNPPYFKQGSRLNENPLRAIARHEITLDLEDLIRAAAKLLK----------------PGGRLAFVHR 171 (248)
T ss_pred ---ccccCEEEeCCCCCCCccccCcChhhhhhhhhhcCCHHHHHHHHHHHcc----------------CCCEEEEEec
Confidence 1149999999887654332 11122233444555555555544444433 5788888875
|
|
| >PRK14874 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.48 E-value=0.074 Score=46.14 Aligned_cols=40 Identities=10% Similarity=0.150 Sum_probs=29.7
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDK 41 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~ 41 (248)
|++++|.||||..|+++++.|.+++.+ ...+..+.++.+.
T Consensus 1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp-~~~l~~l~s~~~~ 40 (334)
T PRK14874 1 GYNVAVVGATGAVGREMLNILEERNFP-VDKLRLLASARSA 40 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCC-cceEEEEEccccC
Confidence 568999999999999999999987621 1244566655433
|
|
| >PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed | Back alignment and domain information |
|---|
Probab=94.44 E-value=0.074 Score=48.43 Aligned_cols=41 Identities=24% Similarity=0.357 Sum_probs=35.2
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA 47 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~ 47 (248)
|+++|+|+ ||+|++++..|++.| ++|++.+|+.++.+++.+
T Consensus 333 k~vlIiGa-GgiG~aia~~L~~~G----~~V~i~~R~~~~~~~la~ 373 (477)
T PRK09310 333 QHVAIVGA-GGAAKAIATTLARAG----AELLIFNRTKAHAEALAS 373 (477)
T ss_pred CEEEEEcC-cHHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHH
Confidence 57999996 799999999999999 899999999877666543
|
|
| >PRK04148 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=94.43 E-value=0.18 Score=37.65 Aligned_cols=55 Identities=18% Similarity=0.132 Sum_probs=42.8
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCch
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSK 67 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 67 (248)
+.+++.|.+ .|.++|..|.+.| +.|+.++.+++..+...+. .+.++..|+.++.-
T Consensus 18 ~kileIG~G--fG~~vA~~L~~~G----~~ViaIDi~~~aV~~a~~~-----~~~~v~dDlf~p~~ 72 (134)
T PRK04148 18 KKIVELGIG--FYFKVAKKLKESG----FDVIVIDINEKAVEKAKKL-----GLNAFVDDLFNPNL 72 (134)
T ss_pred CEEEEEEec--CCHHHHHHHHHCC----CEEEEEECCHHHHHHHHHh-----CCeEEECcCCCCCH
Confidence 357888887 7788899999999 9999999998865554322 46788888887654
|
|
| >PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins | Back alignment and domain information |
|---|
Probab=94.39 E-value=0.16 Score=37.51 Aligned_cols=86 Identities=15% Similarity=0.191 Sum_probs=48.9
Q ss_pred EEEecCCCchhHHHHHHHHhCCCCCCceEEEe-ecCchhHHHHHHHHhh---------cCCceeEEeeccCCchhhhhHH
Q psy11190 4 ILITGCNRGLGLGMIKVLVGLGNNQPAHIFAT-CRNKDKAVELLALAQQ---------HSNLHVIELDVTDFSKQQDVLF 73 (248)
Q Consensus 4 ~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~-~r~~~~~~~~~~~~~~---------~~~~~~~~~D~~~~~~~v~~~~ 73 (248)
+-|.|+ |-.|.++++.|.+.| +.|..+ +|+.+..+.+...... -....++-.-+.|. . +..+.
T Consensus 13 I~iIGa-GrVG~~La~aL~~ag----~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aDlv~iavpDd-a-I~~va 85 (127)
T PF10727_consen 13 IGIIGA-GRVGTALARALARAG----HEVVGVYSRSPASAERAAAFIGAGAILDLEEILRDADLVFIAVPDD-A-IAEVA 85 (127)
T ss_dssp EEEECT-SCCCCHHHHHHHHTT----SEEEEESSCHH-HHHHHHC--TT-----TTGGGCC-SEEEE-S-CC-H-HHHHH
T ss_pred EEEECC-CHHHHHHHHHHHHCC----CeEEEEEeCCcccccccccccccccccccccccccCCEEEEEechH-H-HHHHH
Confidence 455565 899999999999999 777665 6776665555433211 12333444445553 3 78888
Q ss_pred HHhhhhhcCCCccEEEeccccCC
Q psy11190 74 KDISDVVKDQGLNVLVNNAGIAA 96 (248)
Q Consensus 74 ~~i~~~~~~~~iD~lv~~ag~~~ 96 (248)
+++.......+=.+++|+.|-..
T Consensus 86 ~~La~~~~~~~g~iVvHtSGa~~ 108 (127)
T PF10727_consen 86 EQLAQYGAWRPGQIVVHTSGALG 108 (127)
T ss_dssp HHHHCC--S-TT-EEEES-SS--
T ss_pred HHHHHhccCCCCcEEEECCCCCh
Confidence 88877511111258999998654
|
This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A. |
| >KOG3191|consensus | Back alignment and domain information |
|---|
Probab=94.39 E-value=0.86 Score=35.80 Aligned_cols=108 Identities=20% Similarity=0.251 Sum_probs=66.4
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhh-cCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQ-HSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
.++=.|++||+=..........+ .....++-|++.++.+.+.... ..++..+++|+.+. +++ +
T Consensus 46 i~lEIG~GSGvvstfL~~~i~~~----~~~latDiNp~A~~~Tl~TA~~n~~~~~~V~tdl~~~----------l~~--~ 109 (209)
T KOG3191|consen 46 ICLEIGCGSGVVSTFLASVIGPQ----ALYLATDINPEALEATLETARCNRVHIDVVRTDLLSG----------LRN--E 109 (209)
T ss_pred eEEEecCCcchHHHHHHHhcCCC----ceEEEecCCHHHHHHHHHHHHhcCCccceeehhHHhh----------hcc--C
Confidence 35667888887666555555444 7888899999988877554433 33567788887542 232 2
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHH
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLL 131 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l 131 (248)
++|+|+.|.++.. .+..+...+.+...|.--..|.- ++..++|.+
T Consensus 110 --~VDvLvfNPPYVp--t~~~~i~~~~i~~a~aGG~~Gr~-v~d~ll~~v 154 (209)
T KOG3191|consen 110 --SVDVLVFNPPYVP--TSDEEIGDEGIASAWAGGKDGRE-VTDRLLPQV 154 (209)
T ss_pred --CccEEEECCCcCc--CCcccchhHHHHHHHhcCcchHH-HHHHHHhhh
Confidence 5999999988753 44455544555555543333332 344444443
|
|
| >COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=94.37 E-value=0.17 Score=44.93 Aligned_cols=44 Identities=27% Similarity=0.302 Sum_probs=37.2
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALA 49 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~ 49 (248)
|++||.|+ |-+|.-+|+.|+++|. ..|+++.|+.+++.++.+..
T Consensus 179 ~~vlvIGA-Gem~~lva~~L~~~g~---~~i~IaNRT~erA~~La~~~ 222 (414)
T COG0373 179 KKVLVIGA-GEMGELVAKHLAEKGV---KKITIANRTLERAEELAKKL 222 (414)
T ss_pred CeEEEEcc-cHHHHHHHHHHHhCCC---CEEEEEcCCHHHHHHHHHHh
Confidence 56788876 5688999999999996 89999999999988886554
|
|
| >PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=94.36 E-value=0.4 Score=40.56 Aligned_cols=40 Identities=13% Similarity=0.219 Sum_probs=35.0
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL 45 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~ 45 (248)
++++.|.|+ |-+|..+|..|+++| +.|++.+++++.++.+
T Consensus 1 ~~~V~VIG~-G~mG~~iA~~la~~G----~~V~~~d~~~~~~~~~ 40 (288)
T PRK09260 1 IEKLVVVGA-GVMGRGIAYVFAVSG----FQTTLVDIKQEQLESA 40 (288)
T ss_pred CcEEEEECc-cHHHHHHHHHHHhCC----CcEEEEeCCHHHHHHH
Confidence 467888887 889999999999999 9999999998887765
|
|
| >PLN00203 glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=94.32 E-value=0.17 Score=46.47 Aligned_cols=43 Identities=21% Similarity=0.373 Sum_probs=36.7
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLAL 48 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~ 48 (248)
++++|.|+ |.+|..+++.|...|. ..|+++.|+.++++.+.+.
T Consensus 267 kkVlVIGA-G~mG~~~a~~L~~~G~---~~V~V~nRs~era~~La~~ 309 (519)
T PLN00203 267 ARVLVIGA-GKMGKLLVKHLVSKGC---TKMVVVNRSEERVAALREE 309 (519)
T ss_pred CEEEEEeC-HHHHHHHHHHHHhCCC---CeEEEEeCCHHHHHHHHHH
Confidence 57899988 9999999999999984 4799999999888777544
|
|
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=94.31 E-value=0.14 Score=46.02 Aligned_cols=59 Identities=27% Similarity=0.281 Sum_probs=46.1
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCch
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSK 67 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 67 (248)
++.++|.|+ |.+|+.+++.|.++| ..|++++++++..+++.+. ...+.++..|.++.+.
T Consensus 231 ~~~iiIiG~-G~~g~~l~~~L~~~~----~~v~vid~~~~~~~~~~~~---~~~~~~i~gd~~~~~~ 289 (453)
T PRK09496 231 VKRVMIVGG-GNIGYYLAKLLEKEG----YSVKLIERDPERAEELAEE---LPNTLVLHGDGTDQEL 289 (453)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCC----CeEEEEECCHHHHHHHHHH---CCCCeEEECCCCCHHH
Confidence 457888888 999999999999999 8999999998876655332 2356677888877654
|
|
| >cd08244 MDR_enoyl_red Possible enoyl reductase | Back alignment and domain information |
|---|
Probab=94.31 E-value=0.16 Score=43.10 Aligned_cols=78 Identities=22% Similarity=0.345 Sum_probs=50.7
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
.+++|+|+++++|..++..+..+| .+|+.++++.++.+.+.+. + +.. ..|..+.+. .+. +.+..+
T Consensus 144 ~~vlI~g~~~~~g~~~~~la~~~g----~~v~~~~~~~~~~~~~~~~----g-~~~-~~~~~~~~~-~~~----~~~~~~ 208 (324)
T cd08244 144 DVVLVTAAAGGLGSLLVQLAKAAG----ATVVGAAGGPAKTALVRAL----G-ADV-AVDYTRPDW-PDQ----VREALG 208 (324)
T ss_pred CEEEEEcCCchHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHc----C-CCE-EEecCCccH-HHH----HHHHcC
Confidence 368999999999999999999999 8899999887765544221 1 111 133333332 222 333333
Q ss_pred CCCccEEEecccc
Q psy11190 82 DQGLNVLVNNAGI 94 (248)
Q Consensus 82 ~~~iD~lv~~ag~ 94 (248)
..++|+++++.|.
T Consensus 209 ~~~~d~vl~~~g~ 221 (324)
T cd08244 209 GGGVTVVLDGVGG 221 (324)
T ss_pred CCCceEEEECCCh
Confidence 2259999998763
|
Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr |
| >COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.27 E-value=0.27 Score=42.56 Aligned_cols=71 Identities=18% Similarity=0.344 Sum_probs=48.6
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
+.++|+|.+ |+|...++.....| ++|+.++|+.++++...++... ...+.+|.+. .+. +.+
T Consensus 168 ~~V~I~G~G-GlGh~avQ~Aka~g----a~Via~~~~~~K~e~a~~lGAd------~~i~~~~~~~-~~~----~~~--- 228 (339)
T COG1064 168 KWVAVVGAG-GLGHMAVQYAKAMG----AEVIAITRSEEKLELAKKLGAD------HVINSSDSDA-LEA----VKE--- 228 (339)
T ss_pred CEEEEECCc-HHHHHHHHHHHHcC----CeEEEEeCChHHHHHHHHhCCc------EEEEcCCchh-hHH----hHh---
Confidence 478999999 99988777666688 9999999999987766655321 1233333333 222 222
Q ss_pred CCCccEEEeccc
Q psy11190 82 DQGLNVLVNNAG 93 (248)
Q Consensus 82 ~~~iD~lv~~ag 93 (248)
.+|+++.+++
T Consensus 229 --~~d~ii~tv~ 238 (339)
T COG1064 229 --IADAIIDTVG 238 (339)
T ss_pred --hCcEEEECCC
Confidence 1788888887
|
|
| >PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=94.25 E-value=0.24 Score=36.13 Aligned_cols=67 Identities=25% Similarity=0.442 Sum_probs=45.6
Q ss_pred chhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhcCCCccEEEec
Q psy11190 12 GLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVKDQGLNVLVNN 91 (248)
Q Consensus 12 giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~~~~iD~lv~~ 91 (248)
|+|...+..+...| ++|+++++++++.+.+.+.. .. ...|.++.+ +.+++.+..+..++|++|.+
T Consensus 1 ~vG~~a~q~ak~~G----~~vi~~~~~~~k~~~~~~~G-----a~-~~~~~~~~~-----~~~~i~~~~~~~~~d~vid~ 65 (130)
T PF00107_consen 1 GVGLMAIQLAKAMG----AKVIATDRSEEKLELAKELG-----AD-HVIDYSDDD-----FVEQIRELTGGRGVDVVIDC 65 (130)
T ss_dssp HHHHHHHHHHHHTT----SEEEEEESSHHHHHHHHHTT-----ES-EEEETTTSS-----HHHHHHHHTTTSSEEEEEES
T ss_pred ChHHHHHHHHHHcC----CEEEEEECCHHHHHHHHhhc-----cc-ccccccccc-----cccccccccccccceEEEEe
Confidence 68898888888888 99999999988766554332 11 224555443 33445555443369999999
Q ss_pred cc
Q psy11190 92 AG 93 (248)
Q Consensus 92 ag 93 (248)
+|
T Consensus 66 ~g 67 (130)
T PF00107_consen 66 VG 67 (130)
T ss_dssp SS
T ss_pred cC
Confidence 98
|
1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: |
| >PRK00045 hemA glutamyl-tRNA reductase; Reviewed | Back alignment and domain information |
|---|
Probab=94.20 E-value=0.21 Score=44.80 Aligned_cols=43 Identities=28% Similarity=0.322 Sum_probs=35.3
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLAL 48 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~ 48 (248)
++++|.|+ |.+|..+++.|...|. ..|++++|+.+++..+.+.
T Consensus 183 ~~vlViGa-G~iG~~~a~~L~~~G~---~~V~v~~r~~~ra~~la~~ 225 (423)
T PRK00045 183 KKVLVIGA-GEMGELVAKHLAEKGV---RKITVANRTLERAEELAEE 225 (423)
T ss_pred CEEEEECc-hHHHHHHHHHHHHCCC---CeEEEEeCCHHHHHHHHHH
Confidence 57888876 9999999999998883 4899999998877666433
|
|
| >PTZ00354 alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.19 E-value=0.23 Score=42.30 Aligned_cols=78 Identities=17% Similarity=0.255 Sum_probs=49.2
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
.+++|.|+++++|..+++.+...| ..++++.++.++.+.+.+ . +.. .+ .+..+.+ .+.+.+.+..+
T Consensus 142 ~~vlI~ga~g~~g~~~~~~a~~~g----~~v~~~~~~~~~~~~~~~-~--g~~-~~--~~~~~~~----~~~~~~~~~~~ 207 (334)
T PTZ00354 142 QSVLIHAGASGVGTAAAQLAEKYG----AATIITTSSEEKVDFCKK-L--AAI-IL--IRYPDEE----GFAPKVKKLTG 207 (334)
T ss_pred CEEEEEcCCchHHHHHHHHHHHcC----CEEEEEeCCHHHHHHHHH-c--CCc-EE--EecCChh----HHHHHHHHHhC
Confidence 368999999999999999999999 788888887766554422 1 111 11 2222211 12333444333
Q ss_pred CCCccEEEeccc
Q psy11190 82 DQGLNVLVNNAG 93 (248)
Q Consensus 82 ~~~iD~lv~~ag 93 (248)
..++|.++++.|
T Consensus 208 ~~~~d~~i~~~~ 219 (334)
T PTZ00354 208 EKGVNLVLDCVG 219 (334)
T ss_pred CCCceEEEECCc
Confidence 235999998875
|
|
| >cd05295 MDH_like Malate dehydrogenase-like | Back alignment and domain information |
|---|
Probab=94.18 E-value=0.3 Score=43.96 Aligned_cols=122 Identities=19% Similarity=0.157 Sum_probs=66.7
Q ss_pred eEEEecCCCchhHHHHHHHHhC---CCCCCceEEEeec--CchhHHHH-HHHHhhc-CCceeEEeeccCCchhhhhHHHH
Q psy11190 3 SILITGCNRGLGLGMIKVLVGL---GNNQPAHIFATCR--NKDKAVEL-LALAQQH-SNLHVIELDVTDFSKQQDVLFKD 75 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~---g~~~~~~V~~~~r--~~~~~~~~-~~~~~~~-~~~~~~~~D~~~~~~~v~~~~~~ 75 (248)
.++||||+|-||.++.-.++.- |.+..-.+++++. +.+.++.. .++.... +-.. .+.+++..
T Consensus 125 ~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~--~v~i~~~~--------- 193 (452)
T cd05295 125 QVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLR--GISVTTDL--------- 193 (452)
T ss_pred EEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcC--CcEEEECC---------
Confidence 5899999999999999999962 2223355777777 45555444 2332211 1111 01111111
Q ss_pred hhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeec
Q psy11190 76 ISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSS 155 (248)
Q Consensus 76 i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss 155 (248)
.+.+. ..|++|..+|.... ...+..++ ++ ....+.+...+.+.+.+.. ..+.+|++|.
T Consensus 194 -~ea~~--daDvvIitag~prk----~G~~R~DL---L~----~N~~Ifk~~g~~I~~~a~~--------~~~VlVv~tN 251 (452)
T cd05295 194 -DVAFK--DAHVIVLLDDFLIK----EGEDLEGC---IR----SRVAICQLYGPLIEKNAKE--------DVKVIVAGRT 251 (452)
T ss_pred -HHHhC--CCCEEEECCCCCCC----cCCCHHHH---HH----HHHHHHHHHHHHHHHhCCC--------CCeEEEEeCC
Confidence 11222 39999999997532 12233332 22 4455677777777665310 2455666655
Q ss_pred CC
Q psy11190 156 IM 157 (248)
Q Consensus 156 ~~ 157 (248)
++
T Consensus 252 Pv 253 (452)
T cd05295 252 FL 253 (452)
T ss_pred cH
Confidence 55
|
These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=94.17 E-value=0.41 Score=41.01 Aligned_cols=122 Identities=16% Similarity=0.125 Sum_probs=66.2
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH-HHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL-LALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
.+.|.|+ |-+|..+|..|+.+|. ..|++++.+.+..+.. .++..... .......++-..+ ..+ +.
T Consensus 3 KV~VIGa-G~vG~~iA~~la~~g~---~~VvlvDi~~~l~~g~a~d~~~~~~-~~~~~~~i~~t~d--------~~~-~~ 68 (305)
T TIGR01763 3 KISVIGA-GFVGATTAFRLAEKEL---ADLVLLDVVEGIPQGKALDMYEASP-VGGFDTKVTGTNN--------YAD-TA 68 (305)
T ss_pred EEEEECc-CHHHHHHHHHHHHcCC---CeEEEEeCCCChhHHHHHhhhhhhh-ccCCCcEEEecCC--------HHH-hC
Confidence 4667776 8899999999999882 2799999976543312 11221111 0000011110011 111 12
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
..|++|.++|.... + ..+..+ .+. ....+.+...+.+.+.. +++.|+++|.+.....
T Consensus 69 --~aDiVIitag~p~~--~--~~sR~~---l~~----~N~~iv~~i~~~I~~~~----------p~~~iIv~tNP~di~t 125 (305)
T TIGR01763 69 --NSDIVVITAGLPRK--P--GMSRED---LLS----MNAGIVREVTGRIMEHS----------PNPIIVVVSNPLDAMT 125 (305)
T ss_pred --CCCEEEEcCCCCCC--c--CCCHHH---HHH----HHHHHHHHHHHHHHHHC----------CCeEEEEecCcHHHHH
Confidence 38999999996532 1 223222 222 33445555555555432 5788999998776543
|
The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable. |
| >PRK12550 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=94.13 E-value=0.12 Score=43.40 Aligned_cols=42 Identities=17% Similarity=0.210 Sum_probs=35.5
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA 47 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~ 47 (248)
|+++|.|+ ||.+++++-.|++.|+ .+|.++.|+.++.+++.+
T Consensus 123 ~~vlilGa-GGaarAi~~aL~~~g~---~~i~i~nR~~~~a~~la~ 164 (272)
T PRK12550 123 LVVALRGS-GGMAKAVAAALRDAGF---TDGTIVARNEKTGKALAE 164 (272)
T ss_pred CeEEEECC-cHHHHHHHHHHHHCCC---CEEEEEeCCHHHHHHHHH
Confidence 46788875 9999999999999995 579999999988777644
|
|
| >PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate | Back alignment and domain information |
|---|
Probab=94.09 E-value=0.23 Score=36.22 Aligned_cols=34 Identities=15% Similarity=0.322 Sum_probs=26.2
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEE-eecCc
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFA-TCRNK 39 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~-~~r~~ 39 (248)
++.|.|+||-+|..+++.|.++-. ..++. +++..
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~---~e~~~~~~~~~ 35 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPD---FELVALVSSSR 35 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTST---EEEEEEEESTT
T ss_pred CEEEECCCCHHHHHHHHHHhcCCC---ccEEEeeeecc
Confidence 478999999999999999998553 55554 45544
|
This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C .... |
| >cd08241 QOR1 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=94.07 E-value=0.18 Score=42.40 Aligned_cols=40 Identities=25% Similarity=0.535 Sum_probs=34.3
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL 45 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~ 45 (248)
++++|+|+++++|..++..+...| ..|+.++++.++.+.+
T Consensus 141 ~~vli~g~~~~~g~~~~~~a~~~g----~~v~~~~~~~~~~~~~ 180 (323)
T cd08241 141 ETVLVLGAAGGVGLAAVQLAKALG----ARVIAAASSEEKLALA 180 (323)
T ss_pred CEEEEEcCCchHHHHHHHHHHHhC----CEEEEEeCCHHHHHHH
Confidence 478999999999999999999999 8899999887665544
|
QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic |
| >cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like | Back alignment and domain information |
|---|
Probab=94.06 E-value=0.23 Score=42.78 Aligned_cols=76 Identities=18% Similarity=0.367 Sum_probs=47.5
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCce-EEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAH-IFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
.+++|+|+ |++|..++..+...| ++ |+++++++++.+.+.++. .. . ..|..+. + .+.+.+..
T Consensus 165 ~~vlV~G~-G~vG~~~~~~ak~~G----~~~vi~~~~~~~~~~~~~~~g---a~-~--~i~~~~~-~-----~~~~~~~~ 227 (339)
T cd08239 165 DTVLVVGA-GPVGLGALMLARALG----AEDVIGVDPSPERLELAKALG---AD-F--VINSGQD-D-----VQEIRELT 227 (339)
T ss_pred CEEEEECC-CHHHHHHHHHHHHcC----CCEEEEECCCHHHHHHHHHhC---CC-E--EEcCCcc-h-----HHHHHHHh
Confidence 47899975 899999999888888 66 999988877765443321 11 1 1233221 1 22233332
Q ss_pred cCCCccEEEecccc
Q psy11190 81 KDQGLNVLVNNAGI 94 (248)
Q Consensus 81 ~~~~iD~lv~~ag~ 94 (248)
+..++|++|.+.|.
T Consensus 228 ~~~~~d~vid~~g~ 241 (339)
T cd08239 228 SGAGADVAIECSGN 241 (339)
T ss_pred CCCCCCEEEECCCC
Confidence 22259999988774
|
MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at |
| >cd05288 PGDH Prostaglandin dehydrogenases | Back alignment and domain information |
|---|
Probab=94.04 E-value=0.26 Score=42.01 Aligned_cols=77 Identities=13% Similarity=0.241 Sum_probs=49.2
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
.+++|.|+++++|.+++..+.+.| .+|+.+.++.++.+.+.+... --.+ .|..+.+. .+ .+.+..+
T Consensus 147 ~~vlI~g~~g~ig~~~~~~a~~~G----~~vi~~~~~~~~~~~~~~~~g---~~~~--~~~~~~~~-~~----~v~~~~~ 212 (329)
T cd05288 147 ETVVVSAAAGAVGSVVGQIAKLLG----ARVVGIAGSDEKCRWLVEELG---FDAA--INYKTPDL-AE----ALKEAAP 212 (329)
T ss_pred CEEEEecCcchHHHHHHHHHHHcC----CEEEEEeCCHHHHHHHHhhcC---CceE--EecCChhH-HH----HHHHhcc
Confidence 478999999999999999999888 889999888776554433121 1111 22222222 22 2333322
Q ss_pred CCCccEEEeccc
Q psy11190 82 DQGLNVLVNNAG 93 (248)
Q Consensus 82 ~~~iD~lv~~ag 93 (248)
.++|+++.+.|
T Consensus 213 -~~~d~vi~~~g 223 (329)
T cd05288 213 -DGIDVYFDNVG 223 (329)
T ss_pred -CCceEEEEcch
Confidence 25999998876
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino |
| >TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating) | Back alignment and domain information |
|---|
Probab=94.03 E-value=0.49 Score=40.31 Aligned_cols=84 Identities=13% Similarity=0.211 Sum_probs=52.1
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHH-----------hhcCCceeEEeeccCCchhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALA-----------QQHSNLHVIELDVTDFSKQQ 69 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~-----------~~~~~~~~~~~D~~~~~~~v 69 (248)
|| +.|.| .|-+|..+++.|+++| +.|++.+|++++.+.+.+.. ..-....++..-+.+. . +
T Consensus 1 M~-Ig~IG-lG~mG~~la~~L~~~g----~~V~~~dr~~~~~~~l~~~g~~~~~s~~~~~~~~~~~dvIi~~vp~~-~-~ 72 (298)
T TIGR00872 1 MQ-LGLIG-LGRMGANIVRRLAKRG----HDCVGYDHDQDAVKAMKEDRTTGVANLRELSQRLSAPRVVWVMVPHG-I-V 72 (298)
T ss_pred CE-EEEEc-chHHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHcCCcccCCHHHHHhhcCCCCEEEEEcCch-H-H
Confidence 65 44445 6889999999999999 99999999998876664311 0001123333334443 4 7
Q ss_pred hhHHHHhhhhhcCCCccEEEecccc
Q psy11190 70 DVLFKDISDVVKDQGLNVLVNNAGI 94 (248)
Q Consensus 70 ~~~~~~i~~~~~~~~iD~lv~~ag~ 94 (248)
+.+++++...+.. =+++|+....
T Consensus 73 ~~v~~~l~~~l~~--g~ivid~st~ 95 (298)
T TIGR00872 73 DAVLEELAPTLEK--GDIVIDGGNS 95 (298)
T ss_pred HHHHHHHHhhCCC--CCEEEECCCC
Confidence 7777777665432 2456665443
|
This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle. |
| >PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional | Back alignment and domain information |
|---|
Probab=94.00 E-value=0.38 Score=42.32 Aligned_cols=43 Identities=23% Similarity=0.286 Sum_probs=32.4
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEee--cCchhHHHH
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATC--RNKDKAVEL 45 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~--r~~~~~~~~ 45 (248)
||++.|.|+||.||......+.+.. ..++|+.++ +|.+.+.+.
T Consensus 1 mk~VaILGsTGSIG~~tL~vi~~~p--~~f~VvaLaa~~n~~~l~~q 45 (385)
T PRK05447 1 MKRITILGSTGSIGTQTLDVIRRNP--DRFRVVALSAGKNVELLAEQ 45 (385)
T ss_pred CceEEEEcCChHHHHHHHHHHHhCc--cccEEEEEEcCCCHHHHHHH
Confidence 8999999999999999988887653 237888774 555554444
|
|
| >PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ] | Back alignment and domain information |
|---|
Probab=93.93 E-value=0.39 Score=35.23 Aligned_cols=80 Identities=14% Similarity=0.242 Sum_probs=50.3
Q ss_pred eEEEecCCCchhHHHHHHHHh-CCCCCCceEEE-eecCchh-------------------HHHHHHHHhhcCCceeEEee
Q psy11190 3 SILITGCNRGLGLGMIKVLVG-LGNNQPAHIFA-TCRNKDK-------------------AVELLALAQQHSNLHVIELD 61 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~-~g~~~~~~V~~-~~r~~~~-------------------~~~~~~~~~~~~~~~~~~~D 61 (248)
.+.|.|++|-+|+.+++.+.+ .+ ..++. ++|+.+. ...+.+.... .. +..|
T Consensus 2 rV~i~G~~GrMG~~i~~~i~~~~~----~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~---~D-VvID 73 (124)
T PF01113_consen 2 RVGIVGASGRMGRAIAEAILESPG----FELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEE---AD-VVID 73 (124)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTT----EEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH----S-EEEE
T ss_pred EEEEECCCCHHHHHHHHHHHhcCC----cEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhccc---CC-EEEE
Confidence 488999999999999999999 44 55444 5665510 0112222222 12 5689
Q ss_pred ccCCchhhhhHHHHhhhhhcCCCccEEEeccccC
Q psy11190 62 VTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIA 95 (248)
Q Consensus 62 ~~~~~~~v~~~~~~i~~~~~~~~iD~lv~~ag~~ 95 (248)
+|.++. +...++...+. ++.+|+-..|..
T Consensus 74 fT~p~~-~~~~~~~~~~~----g~~~ViGTTG~~ 102 (124)
T PF01113_consen 74 FTNPDA-VYDNLEYALKH----GVPLVIGTTGFS 102 (124)
T ss_dssp ES-HHH-HHHHHHHHHHH----T-EEEEE-SSSH
T ss_pred cCChHH-hHHHHHHHHhC----CCCEEEECCCCC
Confidence 998877 66666666654 488899888864
|
In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A .... |
| >TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E | Back alignment and domain information |
|---|
Probab=93.91 E-value=0.62 Score=37.32 Aligned_cols=33 Identities=30% Similarity=0.416 Sum_probs=28.0
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCc
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNK 39 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~ 39 (248)
+++|.| .||+|..+++.|+..|. .++.+++++.
T Consensus 23 ~VlviG-~GglGs~ia~~La~~Gv---~~i~lvD~d~ 55 (202)
T TIGR02356 23 HVLIIG-AGGLGSPAALYLAGAGV---GTIVIVDDDH 55 (202)
T ss_pred CEEEEC-CCHHHHHHHHHHHHcCC---CeEEEecCCE
Confidence 567776 67999999999999995 5899998874
|
coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli. |
| >PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional | Back alignment and domain information |
|---|
Probab=93.89 E-value=0.53 Score=40.90 Aligned_cols=34 Identities=29% Similarity=0.403 Sum_probs=28.6
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNK 39 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~ 39 (248)
++++|.|+ ||+|..+++.|+..|. .++.+++++.
T Consensus 25 ~~VlIiG~-GglGs~va~~La~aGv---g~i~lvD~D~ 58 (338)
T PRK12475 25 KHVLIVGA-GALGAANAEALVRAGI---GKLTIADRDY 58 (338)
T ss_pred CcEEEECC-CHHHHHHHHHHHHcCC---CEEEEEcCCc
Confidence 46888876 7899999999999994 5889898874
|
|
| >PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional | Back alignment and domain information |
|---|
Probab=93.85 E-value=0.29 Score=44.37 Aligned_cols=75 Identities=15% Similarity=0.243 Sum_probs=52.3
Q ss_pred ceEEEecC----------------CCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCC
Q psy11190 2 KSILITGC----------------NRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDF 65 (248)
Q Consensus 2 k~~lVtGa----------------s~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 65 (248)
|.+|||+| ||-.|.++|+.+..+| +.|+++.-...- .....+.++.+
T Consensus 257 kkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~G----A~VtlI~Gp~~~--------~~p~~v~~i~V----- 319 (475)
T PRK13982 257 RRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAG----AEVTLISGPVDL--------ADPQGVKVIHV----- 319 (475)
T ss_pred CEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCC----CcEEEEeCCcCC--------CCCCCceEEEe-----
Confidence 46788876 4567999999999999 889988744321 01223444433
Q ss_pred chhhhhHHHHhhhhhcCCCccEEEeccccCCc
Q psy11190 66 SKQQDVLFKDISDVVKDQGLNVLVNNAGIAAK 97 (248)
Q Consensus 66 ~~~v~~~~~~i~~~~~~~~iD~lv~~ag~~~~ 97 (248)
++ .+++++.+.+.+. .|++|++|.+.+.
T Consensus 320 ~t-a~eM~~av~~~~~---~Di~I~aAAVaDy 347 (475)
T PRK13982 320 ES-ARQMLAAVEAALP---ADIAIFAAAVADW 347 (475)
T ss_pred cC-HHHHHHHHHhhCC---CCEEEEeccccce
Confidence 33 6677777777665 7999999998764
|
|
| >cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2 | Back alignment and domain information |
|---|
Probab=93.85 E-value=0.22 Score=42.28 Aligned_cols=78 Identities=12% Similarity=0.191 Sum_probs=50.1
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
.+++|.|+++++|.+++..+...| +.|+.+.++.++.+.+.+. + +..+ .+..+. + +.+.+.+..+
T Consensus 141 ~~vlI~g~~g~ig~~~~~~a~~~G----~~v~~~~~~~~~~~~~~~~----g-~~~~-~~~~~~-~----~~~~i~~~~~ 205 (324)
T cd08292 141 QWLIQNAAGGAVGKLVAMLAAARG----INVINLVRRDAGVAELRAL----G-IGPV-VSTEQP-G----WQDKVREAAG 205 (324)
T ss_pred CEEEEcccccHHHHHHHHHHHHCC----CeEEEEecCHHHHHHHHhc----C-CCEE-EcCCCc-h----HHHHHHHHhC
Confidence 378999999999999999999989 8899988887765555432 1 1111 122221 1 1223333333
Q ss_pred CCCccEEEecccc
Q psy11190 82 DQGLNVLVNNAGI 94 (248)
Q Consensus 82 ~~~iD~lv~~ag~ 94 (248)
..++|+++.+.|.
T Consensus 206 ~~~~d~v~d~~g~ 218 (324)
T cd08292 206 GAPISVALDSVGG 218 (324)
T ss_pred CCCCcEEEECCCC
Confidence 2259999988774
|
2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina |
| >PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=93.84 E-value=0.73 Score=41.53 Aligned_cols=35 Identities=34% Similarity=0.438 Sum_probs=30.4
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDK 41 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~ 41 (248)
|+++|+|.+ ++|.++|+.|+++| +.|.+.+.+...
T Consensus 6 ~~~~v~G~g-~~G~~~a~~l~~~g----~~v~~~d~~~~~ 40 (445)
T PRK04308 6 KKILVAGLG-GTGISMIAYLRKNG----AEVAAYDAELKP 40 (445)
T ss_pred CEEEEECCC-HHHHHHHHHHHHCC----CEEEEEeCCCCc
Confidence 679999986 99999999999999 899999876543
|
|
| >TIGR01751 crot-CoA-red crotonyl-CoA reductase | Back alignment and domain information |
|---|
Probab=93.83 E-value=0.22 Score=44.13 Aligned_cols=41 Identities=24% Similarity=0.238 Sum_probs=33.2
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELL 46 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~ 46 (248)
.+++|+|+++++|..++..+...| ++++.+.++.++.+.+.
T Consensus 191 ~~vlV~Ga~g~vG~~ai~~ak~~G----~~vi~~~~~~~~~~~~~ 231 (398)
T TIGR01751 191 DNVLIWGAAGGLGSYATQLARAGG----GNPVAVVSSPEKAEYCR 231 (398)
T ss_pred CEEEEEcCCcHHHHHHHHHHHHcC----CeEEEEcCCHHHHHHHH
Confidence 378999999999999998888888 78888887766554443
|
The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae. |
| >PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=93.82 E-value=0.18 Score=39.61 Aligned_cols=37 Identities=14% Similarity=0.263 Sum_probs=30.9
Q ss_pred EEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH
Q psy11190 4 ILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL 45 (248)
Q Consensus 4 ~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~ 45 (248)
+.|.|+ |-+|+.+|..|+..| +.|.+.+++++.++..
T Consensus 2 V~ViGa-G~mG~~iA~~~a~~G----~~V~l~d~~~~~l~~~ 38 (180)
T PF02737_consen 2 VAVIGA-GTMGRGIAALFARAG----YEVTLYDRSPEALERA 38 (180)
T ss_dssp EEEES--SHHHHHHHHHHHHTT----SEEEEE-SSHHHHHHH
T ss_pred EEEEcC-CHHHHHHHHHHHhCC----CcEEEEECChHHHHhh
Confidence 566676 999999999999999 9999999999887665
|
1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B .... |
| >cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1 | Back alignment and domain information |
|---|
Probab=93.80 E-value=0.2 Score=42.89 Aligned_cols=76 Identities=14% Similarity=0.267 Sum_probs=46.4
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhcC
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVKD 82 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~~ 82 (248)
+++++||++++|..++......| .+|+.++++.++.+.+.++ +.-.+ .|..+.+. .+. +.+..+.
T Consensus 146 vlv~~~g~g~vG~~a~q~a~~~G----~~vi~~~~~~~~~~~~~~~----g~~~~--i~~~~~~~-~~~----v~~~~~~ 210 (324)
T cd08291 146 AVVHTAAASALGRMLVRLCKADG----IKVINIVRRKEQVDLLKKI----GAEYV--LNSSDPDF-LED----LKELIAK 210 (324)
T ss_pred EEEEccCccHHHHHHHHHHHHcC----CEEEEEeCCHHHHHHHHHc----CCcEE--EECCCccH-HHH----HHHHhCC
Confidence 34455999999999888777778 7899999887776555432 11112 23222222 222 3333222
Q ss_pred CCccEEEeccc
Q psy11190 83 QGLNVLVNNAG 93 (248)
Q Consensus 83 ~~iD~lv~~ag 93 (248)
.++|+++.+.|
T Consensus 211 ~~~d~vid~~g 221 (324)
T cd08291 211 LNATIFFDAVG 221 (324)
T ss_pred CCCcEEEECCC
Confidence 25999998877
|
2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin |
| >TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=93.79 E-value=0.39 Score=41.68 Aligned_cols=41 Identities=20% Similarity=0.327 Sum_probs=34.2
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA 47 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~ 47 (248)
.+++|.|+ |++|..++..+...| .+|+++++++++.+.+.+
T Consensus 168 ~~VlV~G~-G~vG~~a~~~a~~~G----~~vi~~~~~~~~~~~~~~ 208 (349)
T TIGR03201 168 DLVIVIGA-GGVGGYMVQTAKAMG----AAVVAIDIDPEKLEMMKG 208 (349)
T ss_pred CEEEEECC-CHHHHHHHHHHHHcC----CeEEEEcCCHHHHHHHHH
Confidence 47999999 999999998888888 789999998877665433
|
Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA. |
| >PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated | Back alignment and domain information |
|---|
Probab=93.73 E-value=0.6 Score=40.59 Aligned_cols=34 Identities=29% Similarity=0.414 Sum_probs=28.9
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNK 39 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~ 39 (248)
++++|.|+ ||+|..+++.|+..|. -++.+++++.
T Consensus 25 ~~VlVvG~-GglGs~va~~La~aGv---g~i~lvD~D~ 58 (339)
T PRK07688 25 KHVLIIGA-GALGTANAEMLVRAGV---GKVTIVDRDY 58 (339)
T ss_pred CcEEEECC-CHHHHHHHHHHHHcCC---CeEEEEeCCc
Confidence 36788877 8999999999999994 5899999874
|
|
| >cd08246 crotonyl_coA_red crotonyl-CoA reductase | Back alignment and domain information |
|---|
Probab=93.69 E-value=0.38 Score=42.43 Aligned_cols=42 Identities=31% Similarity=0.356 Sum_probs=34.6
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA 47 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~ 47 (248)
.+++|+|+++++|.+++..+...| ..++.++++.++.+.+.+
T Consensus 195 ~~vlV~ga~g~iG~a~~~lak~~G----~~vv~~~~s~~~~~~~~~ 236 (393)
T cd08246 195 DNVLIWGASGGLGSMAIQLARAAG----ANPVAVVSSEEKAEYCRA 236 (393)
T ss_pred CEEEEECCCcHHHHHHHHHHHHcC----CeEEEEeCCHHHHHHHHH
Confidence 378999999999999998888888 788888888776655543
|
Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma |
| >TIGR01035 hemA glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=93.68 E-value=0.31 Score=43.61 Aligned_cols=42 Identities=26% Similarity=0.355 Sum_probs=35.4
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA 47 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~ 47 (248)
++++|.|+ |.+|..+++.|...|. ..|++++|+.+++.++.+
T Consensus 181 ~~VlViGa-G~iG~~~a~~L~~~G~---~~V~v~~rs~~ra~~la~ 222 (417)
T TIGR01035 181 KKALLIGA-GEMGELVAKHLLRKGV---GKILIANRTYERAEDLAK 222 (417)
T ss_pred CEEEEECC-hHHHHHHHHHHHHCCC---CEEEEEeCCHHHHHHHHH
Confidence 57899987 9999999999998885 689999999887666543
|
This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA. |
| >PRK08762 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=93.68 E-value=0.56 Score=41.41 Aligned_cols=33 Identities=21% Similarity=0.263 Sum_probs=27.6
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCc
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNK 39 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~ 39 (248)
+++|.| .||+|..+++.|+..|. .++.+++++.
T Consensus 137 ~VlvvG-~GG~Gs~ia~~La~~Gv---g~i~lvD~d~ 169 (376)
T PRK08762 137 RVLLIG-AGGLGSPAALYLAAAGV---GTLGIVDHDV 169 (376)
T ss_pred cEEEEC-CCHHHHHHHHHHHHcCC---CeEEEEeCCE
Confidence 566764 58999999999999995 5899998874
|
|
| >PRK09880 L-idonate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.62 E-value=0.3 Score=42.21 Aligned_cols=75 Identities=13% Similarity=0.162 Sum_probs=46.8
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
++++|+|+ |++|...+..+...|+ .+|+++++++++.+.+.++. .. . ..|..+. + ...+ .+..+
T Consensus 171 ~~VlV~G~-G~vG~~aiqlak~~G~---~~Vi~~~~~~~~~~~a~~lG---a~-~--vi~~~~~-~-~~~~----~~~~g 234 (343)
T PRK09880 171 KRVFVSGV-GPIGCLIVAAVKTLGA---AEIVCADVSPRSLSLAREMG---AD-K--LVNPQND-D-LDHY----KAEKG 234 (343)
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCC---cEEEEEeCCHHHHHHHHHcC---Cc-E--EecCCcc-c-HHHH----hccCC
Confidence 47899986 8999999888887783 37889999887766544331 11 1 1233332 2 2221 11112
Q ss_pred CCCccEEEecccc
Q psy11190 82 DQGLNVLVNNAGI 94 (248)
Q Consensus 82 ~~~iD~lv~~ag~ 94 (248)
++|++|.++|.
T Consensus 235 --~~D~vid~~G~ 245 (343)
T PRK09880 235 --YFDVSFEVSGH 245 (343)
T ss_pred --CCCEEEECCCC
Confidence 48999998873
|
|
| >TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=93.51 E-value=0.39 Score=42.02 Aligned_cols=77 Identities=19% Similarity=0.229 Sum_probs=48.1
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCc-eEEEeecCchhHHHHHHHHhhcCCceeEEeeccCC-chhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPA-HIFATCRNKDKAVELLALAQQHSNLHVIELDVTDF-SKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~v~~~~~~i~~~ 79 (248)
.+++|+|+ |++|..++..+...| . +|+.+++++++++.+.++. .. . ..|..+. +. +.. .+.+.
T Consensus 187 ~~VlV~G~-G~iG~~a~q~Ak~~G----~~~Vi~~~~~~~~~~~a~~~G---a~-~--~i~~~~~~~~-~~~---~v~~~ 251 (368)
T TIGR02818 187 DTVAVFGL-GGIGLSVIQGARMAK----ASRIIAIDINPAKFELAKKLG---AT-D--CVNPNDYDKP-IQE---VIVEI 251 (368)
T ss_pred CEEEEECC-CHHHHHHHHHHHHcC----CCeEEEEcCCHHHHHHHHHhC---CC-e--EEcccccchh-HHH---HHHHH
Confidence 47899975 899999888887788 5 7999999887766553321 11 1 2233321 12 222 23332
Q ss_pred hcCCCccEEEecccc
Q psy11190 80 VKDQGLNVLVNNAGI 94 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~ 94 (248)
.+. ++|++|.++|.
T Consensus 252 ~~~-g~d~vid~~G~ 265 (368)
T TIGR02818 252 TDG-GVDYSFECIGN 265 (368)
T ss_pred hCC-CCCEEEECCCC
Confidence 221 59999999874
|
The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols. |
| >PRK08306 dipicolinate synthase subunit A; Reviewed | Back alignment and domain information |
|---|
Probab=93.48 E-value=0.27 Score=41.92 Aligned_cols=37 Identities=22% Similarity=0.430 Sum_probs=32.1
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAV 43 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~ 43 (248)
++++|.|. |++|+.++..|...| ++|.+++|+.++.+
T Consensus 153 ~kvlViG~-G~iG~~~a~~L~~~G----a~V~v~~r~~~~~~ 189 (296)
T PRK08306 153 SNVLVLGF-GRTGMTLARTLKALG----ANVTVGARKSAHLA 189 (296)
T ss_pred CEEEEECC-cHHHHHHHHHHHHCC----CEEEEEECCHHHHH
Confidence 57899997 679999999999999 89999999976543
|
|
| >PRK12767 carbamoyl phosphate synthase-like protein; Provisional | Back alignment and domain information |
|---|
Probab=93.44 E-value=0.37 Score=41.32 Aligned_cols=37 Identities=19% Similarity=0.212 Sum_probs=30.4
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDK 41 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~ 41 (248)
|+++||||+++++ .+++.|.+.| .+.+|++++.++..
T Consensus 1 ~~~vLv~g~~~~~--~~~~~l~~~~--~g~~vi~~d~~~~~ 37 (326)
T PRK12767 1 MMNILVTSAGRRV--QLVKALKKSL--LKGRVIGADISELA 37 (326)
T ss_pred CceEEEecCCccH--HHHHHHHHhc--cCCEEEEECCCCcc
Confidence 7899999998887 8899999885 23899999887543
|
|
| >cd08300 alcohol_DH_class_III class III alcohol dehydrogenases | Back alignment and domain information |
|---|
Probab=93.43 E-value=0.41 Score=41.87 Aligned_cols=77 Identities=17% Similarity=0.245 Sum_probs=48.7
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCc-eEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCc-hhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPA-HIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFS-KQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~v~~~~~~i~~~ 79 (248)
.+++|.|+ +++|..++..+...| + .|+.+++++++.+.+.++ +.. .+ .|..+.+ + .... +.+.
T Consensus 188 ~~VlV~G~-G~vG~~a~~~ak~~G----~~~vi~~~~~~~~~~~~~~l---Ga~-~~--i~~~~~~~~-~~~~---v~~~ 252 (368)
T cd08300 188 STVAVFGL-GAVGLAVIQGAKAAG----ASRIIGIDINPDKFELAKKF---GAT-DC--VNPKDHDKP-IQQV---LVEM 252 (368)
T ss_pred CEEEEECC-CHHHHHHHHHHHHcC----CCeEEEEeCCHHHHHHHHHc---CCC-EE--EcccccchH-HHHH---HHHH
Confidence 47899975 899999998888888 6 799999998876654332 111 11 3333321 2 2222 2222
Q ss_pred hcCCCccEEEecccc
Q psy11190 80 VKDQGLNVLVNNAGI 94 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~ 94 (248)
.+ +++|++|.+.|.
T Consensus 253 ~~-~g~d~vid~~g~ 266 (368)
T cd08300 253 TD-GGVDYTFECIGN 266 (368)
T ss_pred hC-CCCcEEEECCCC
Confidence 22 159999998873
|
Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim |
| >PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1 | Back alignment and domain information |
|---|
Probab=93.33 E-value=0.77 Score=35.52 Aligned_cols=38 Identities=24% Similarity=0.496 Sum_probs=30.1
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL 45 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~ 45 (248)
+++|+| +|-.|...++.|...| ++|+..+.+.+..++.
T Consensus 22 ~vvv~G-~G~vg~gA~~~~~~lG----a~v~~~d~~~~~~~~~ 59 (168)
T PF01262_consen 22 KVVVTG-AGRVGQGAAEIAKGLG----AEVVVPDERPERLRQL 59 (168)
T ss_dssp EEEEES-TSHHHHHHHHHHHHTT-----EEEEEESSHHHHHHH
T ss_pred EEEEEC-CCHHHHHHHHHHhHCC----CEEEeccCCHHHHHhh
Confidence 567776 7788999999999999 8999999887765554
|
4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A .... |
| >PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated | Back alignment and domain information |
|---|
Probab=93.31 E-value=0.19 Score=43.73 Aligned_cols=35 Identities=20% Similarity=0.272 Sum_probs=28.3
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecC
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRN 38 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~ 38 (248)
|+++.|.||||.+|+.+++.|.++.. .+++.+.+.
T Consensus 2 m~kVaIiGAtG~vG~~l~~~L~~~p~---~elv~v~~~ 36 (343)
T PRK00436 2 MIKVGIVGASGYTGGELLRLLLNHPE---VEIVAVTSR 36 (343)
T ss_pred CeEEEEECCCCHHHHHHHHHHHcCCC---ceEEEEECc
Confidence 56899999999999999999997642 677665553
|
|
| >PRK08655 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.30 E-value=0.18 Score=45.45 Aligned_cols=38 Identities=32% Similarity=0.399 Sum_probs=33.4
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHH
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVE 44 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~ 44 (248)
++.|.||+|.+|.++++.|.++| ..|++.+|+.+...+
T Consensus 2 kI~IIGG~G~mG~slA~~L~~~G----~~V~v~~r~~~~~~~ 39 (437)
T PRK08655 2 KISIIGGTGGLGKWFARFLKEKG----FEVIVTGRDPKKGKE 39 (437)
T ss_pred EEEEEecCCHHHHHHHHHHHHCC----CEEEEEECChHHHHH
Confidence 58899999999999999999999 899999998766443
|
|
| >cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase) | Back alignment and domain information |
|---|
Probab=93.29 E-value=0.32 Score=42.62 Aligned_cols=76 Identities=22% Similarity=0.344 Sum_probs=47.4
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCc-eEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPA-HIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
.+++|.|+ +++|..++..+...| + +|+++++++++.+.+.++. .. .+ .|..+.+ +.+++.+..
T Consensus 193 ~~VlV~G~-G~vG~~a~~lak~~G----~~~Vi~~~~~~~r~~~a~~~G---a~-~~--i~~~~~~-----~~~~i~~~~ 256 (371)
T cd08281 193 QSVAVVGL-GGVGLSALLGAVAAG----ASQVVAVDLNEDKLALARELG---AT-AT--VNAGDPN-----AVEQVRELT 256 (371)
T ss_pred CEEEEECC-CHHHHHHHHHHHHcC----CCcEEEEcCCHHHHHHHHHcC---Cc-eE--eCCCchh-----HHHHHHHHh
Confidence 47899885 899999888888888 6 6999998887765443321 11 11 2322222 222333333
Q ss_pred cCCCccEEEecccc
Q psy11190 81 KDQGLNVLVNNAGI 94 (248)
Q Consensus 81 ~~~~iD~lv~~ag~ 94 (248)
+. ++|++|.+.|.
T Consensus 257 ~~-g~d~vid~~G~ 269 (371)
T cd08281 257 GG-GVDYAFEMAGS 269 (371)
T ss_pred CC-CCCEEEECCCC
Confidence 32 59999998873
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd |
| >cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members | Back alignment and domain information |
|---|
Probab=93.26 E-value=0.29 Score=41.72 Aligned_cols=40 Identities=28% Similarity=0.474 Sum_probs=33.7
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL 45 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~ 45 (248)
.+++|.|+++++|.+++..+...| ..|+.+.++.++.+.+
T Consensus 141 ~~vlI~ga~g~ig~~~~~~a~~~g----~~v~~~~~~~~~~~~~ 180 (329)
T cd08250 141 ETVLVTAAAGGTGQFAVQLAKLAG----CHVIGTCSSDEKAEFL 180 (329)
T ss_pred CEEEEEeCccHHHHHHHHHHHHcC----CeEEEEeCcHHHHHHH
Confidence 468999999999999999888888 7899998887665544
|
Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. |
| >cd05286 QOR2 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=93.21 E-value=0.34 Score=40.63 Aligned_cols=40 Identities=25% Similarity=0.410 Sum_probs=34.0
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL 45 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~ 45 (248)
++++|.|+++++|.++++.+...| ..|+.+.++.++.+.+
T Consensus 138 ~~vlI~g~~g~~g~~~~~~a~~~g----~~v~~~~~~~~~~~~~ 177 (320)
T cd05286 138 DTVLVHAAAGGVGLLLTQWAKALG----ATVIGTVSSEEKAELA 177 (320)
T ss_pred CEEEEEcCCchHHHHHHHHHHHcC----CEEEEEcCCHHHHHHH
Confidence 478999999999999999999888 8899998887765544
|
Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone |
| >PLN02740 Alcohol dehydrogenase-like | Back alignment and domain information |
|---|
Probab=93.18 E-value=0.43 Score=42.00 Aligned_cols=77 Identities=19% Similarity=0.221 Sum_probs=48.6
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCc-eEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCc-hhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPA-HIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFS-KQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~v~~~~~~i~~~ 79 (248)
.+++|.|+ |++|..++..+...| . +|+.++++.++++.+.++. .. .+ .|..+.+ . ... .+.+.
T Consensus 200 ~~VlV~G~-G~vG~~a~q~ak~~G----~~~Vi~~~~~~~r~~~a~~~G---a~-~~--i~~~~~~~~-~~~---~v~~~ 264 (381)
T PLN02740 200 SSVAIFGL-GAVGLAVAEGARARG----ASKIIGVDINPEKFEKGKEMG---IT-DF--INPKDSDKP-VHE---RIREM 264 (381)
T ss_pred CEEEEECC-CHHHHHHHHHHHHCC----CCcEEEEcCChHHHHHHHHcC---Cc-EE--Eecccccch-HHH---HHHHH
Confidence 47899985 999999988888888 6 6999999887766553321 11 12 2333321 2 222 22332
Q ss_pred hcCCCccEEEecccc
Q psy11190 80 VKDQGLNVLVNNAGI 94 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~ 94 (248)
.+. ++|++|.+.|.
T Consensus 265 ~~~-g~dvvid~~G~ 278 (381)
T PLN02740 265 TGG-GVDYSFECAGN 278 (381)
T ss_pred hCC-CCCEEEECCCC
Confidence 222 49999999884
|
|
| >cd05282 ETR_like 2-enoyl thioester reductase-like | Back alignment and domain information |
|---|
Probab=93.16 E-value=0.36 Score=40.96 Aligned_cols=40 Identities=20% Similarity=0.308 Sum_probs=33.9
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL 45 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~ 45 (248)
.+++|.|+++++|.+++..+...| ..|+.+.++.++.+.+
T Consensus 140 ~~vlI~g~~~~vg~~~~~~a~~~g----~~v~~~~~~~~~~~~~ 179 (323)
T cd05282 140 DWVIQNAANSAVGRMLIQLAKLLG----FKTINVVRRDEQVEEL 179 (323)
T ss_pred CEEEEcccccHHHHHHHHHHHHCC----CeEEEEecChHHHHHH
Confidence 378999999999999999999999 8899988887665444
|
2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman |
| >PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=93.10 E-value=0.23 Score=42.47 Aligned_cols=40 Identities=20% Similarity=0.156 Sum_probs=34.0
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL 45 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~ 45 (248)
|+++.|.| +|-+|.++|..|+++| ++|++.+++++..+..
T Consensus 2 ~~~V~VIG-~G~mG~~iA~~la~~G----~~V~v~d~~~~~~~~~ 41 (308)
T PRK06129 2 MGSVAIIG-AGLIGRAWAIVFARAG----HEVRLWDADPAAAAAA 41 (308)
T ss_pred CcEEEEEC-ccHHHHHHHHHHHHCC----CeeEEEeCCHHHHHHH
Confidence 45688888 7789999999999999 8999999998766543
|
|
| >PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed | Back alignment and domain information |
|---|
Probab=93.09 E-value=1.1 Score=38.17 Aligned_cols=84 Identities=15% Similarity=0.171 Sum_probs=50.9
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHH-----------HhhcCCceeEEeeccCCchhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLAL-----------AQQHSNLHVIELDVTDFSKQQ 69 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~-----------~~~~~~~~~~~~D~~~~~~~v 69 (248)
||+.+| |.|-+|..+++.|+++| +.|++.+|++++.+.+.+. .....+..++..-+.+.+. +
T Consensus 1 m~Ig~I--GlG~MG~~mA~~L~~~g----~~v~v~dr~~~~~~~~~~~g~~~~~~~~e~~~~~~~~dvvi~~v~~~~~-~ 73 (301)
T PRK09599 1 MQLGMI--GLGRMGGNMARRLLRGG----HEVVGYDRNPEAVEALAEEGATGADSLEELVAKLPAPRVVWLMVPAGEI-T 73 (301)
T ss_pred CEEEEE--cccHHHHHHHHHHHHCC----CeEEEEECCHHHHHHHHHCCCeecCCHHHHHhhcCCCCEEEEEecCCcH-H
Confidence 654455 68899999999999999 8999999998876655321 1110011233333444444 6
Q ss_pred hhHHHHhhhhhcCCCccEEEeccc
Q psy11190 70 DVLFKDISDVVKDQGLNVLVNNAG 93 (248)
Q Consensus 70 ~~~~~~i~~~~~~~~iD~lv~~ag 93 (248)
+.+++.+...+.. =+++|....
T Consensus 74 ~~v~~~l~~~l~~--g~ivid~st 95 (301)
T PRK09599 74 DATIDELAPLLSP--GDIVIDGGN 95 (301)
T ss_pred HHHHHHHHhhCCC--CCEEEeCCC
Confidence 6666666554432 245555543
|
|
| >cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase | Back alignment and domain information |
|---|
Probab=93.07 E-value=0.37 Score=41.67 Aligned_cols=77 Identities=23% Similarity=0.330 Sum_probs=49.2
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCc-eEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPA-HIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
++++|+|+ +++|..+++.+...| . +|++++++.++.+.+.++ +. . ...|..+.+. . +.+.+..
T Consensus 174 ~~vlI~g~-g~vG~~a~q~a~~~G----~~~v~~~~~~~~~~~~~~~~---ga--~-~~i~~~~~~~-~----~~l~~~~ 237 (351)
T cd08233 174 DTALVLGA-GPIGLLTILALKAAG----ASKIIVSEPSEARRELAEEL---GA--T-IVLDPTEVDV-V----AEVRKLT 237 (351)
T ss_pred CEEEEECC-CHHHHHHHHHHHHcC----CCEEEEECCCHHHHHHHHHh---CC--C-EEECCCccCH-H----HHHHHHh
Confidence 47899985 899999999999888 6 888888887776544332 11 1 1233333222 2 2333333
Q ss_pred cCCCccEEEecccc
Q psy11190 81 KDQGLNVLVNNAGI 94 (248)
Q Consensus 81 ~~~~iD~lv~~ag~ 94 (248)
+..++|+++.+.|.
T Consensus 238 ~~~~~d~vid~~g~ 251 (351)
T cd08233 238 GGGGVDVSFDCAGV 251 (351)
T ss_pred CCCCCCEEEECCCC
Confidence 32349999999873
|
(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. |
| >PF05185 PRMT5: PRMT5 arginine-N-methyltransferase; InterPro: IPR007857 The human homologue of Saccharomyces cerevisiae Skb1 (Shk1 kinase-binding protein 1) is a protein methyltransferase [] | Back alignment and domain information |
|---|
Probab=93.05 E-value=0.38 Score=43.47 Aligned_cols=75 Identities=19% Similarity=0.254 Sum_probs=47.8
Q ss_pred ceEEEecCCCchhHHHH-HHHHhCCCCCCceEEEeecCchhHHHHHHH---HhhcCCceeEEeeccCCchhhhhHHHHhh
Q psy11190 2 KSILITGCNRGLGLGMI-KVLVGLGNNQPAHIFATCRNKDKAVELLAL---AQQHSNLHVIELDVTDFSKQQDVLFKDIS 77 (248)
Q Consensus 2 k~~lVtGas~giG~~ia-~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~~~D~~~~~~~v~~~~~~i~ 77 (248)
+++++.||++|+=...| ++.++.+ ...+|+++..|+.....+.+. ..-.++++++..|+.+.+. .
T Consensus 188 ~vVldVGAGrGpL~~~al~A~~~~~--~a~~VyAVEkn~~A~~~l~~~v~~n~w~~~V~vi~~d~r~v~l---------p 256 (448)
T PF05185_consen 188 KVVLDVGAGRGPLSMFALQAGARAG--GAVKVYAVEKNPNAVVTLQKRVNANGWGDKVTVIHGDMREVEL---------P 256 (448)
T ss_dssp -EEEEES-TTSHHHHHHHHTTHHHC--CESEEEEEESSTHHHHHHHHHHHHTTTTTTEEEEES-TTTSCH---------S
T ss_pred eEEEEeCCCccHHHHHHHHHHHHhC--CCeEEEEEcCCHhHHHHHHHHHHhcCCCCeEEEEeCcccCCCC---------C
Confidence 57999999999865444 3333333 237999999998766555443 2224689999999998775 1
Q ss_pred hhhcCCCccEEEecc
Q psy11190 78 DVVKDQGLNVLVNNA 92 (248)
Q Consensus 78 ~~~~~~~iD~lv~~a 92 (248)
+ ++|+||.=-
T Consensus 257 e-----kvDIIVSEl 266 (448)
T PF05185_consen 257 E-----KVDIIVSEL 266 (448)
T ss_dssp S------EEEEEE--
T ss_pred C-----ceeEEEEec
Confidence 1 489988643
|
These proteins seem to play a role in Jak signalling.; GO: 0008168 methyltransferase activity, 0005737 cytoplasm; PDB: 2Y1W_C 2Y1X_D 2V7E_B 2V74_H 3R0Q_G 3B3F_B 3B3J_A 3B3G_A 3UA3_A 3UA4_B .... |
| >PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=93.02 E-value=0.62 Score=42.39 Aligned_cols=34 Identities=21% Similarity=0.344 Sum_probs=28.7
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCch
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKD 40 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~ 40 (248)
|+++|.|+ |++|.++|+.|.++| ..|.+++++..
T Consensus 17 ~~v~viG~-G~~G~~~A~~L~~~G----~~V~~~d~~~~ 50 (480)
T PRK01438 17 LRVVVAGL-GVSGFAAADALLELG----ARVTVVDDGDD 50 (480)
T ss_pred CEEEEECC-CHHHHHHHHHHHHCC----CEEEEEeCCch
Confidence 57888886 779999999999999 89999986643
|
|
| >PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain | Back alignment and domain information |
|---|
Probab=92.92 E-value=0.36 Score=33.34 Aligned_cols=43 Identities=23% Similarity=0.339 Sum_probs=33.2
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEe-ecCchhHHHHHHH
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFAT-CRNKDKAVELLAL 48 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~-~r~~~~~~~~~~~ 48 (248)
..+| |+|.+|.++++.|++.|. ...+|.+. .|++++.+++.+.
T Consensus 2 I~iI--G~G~mg~al~~~l~~~g~-~~~~v~~~~~r~~~~~~~~~~~ 45 (96)
T PF03807_consen 2 IGII--GAGNMGSALARGLLASGI-KPHEVIIVSSRSPEKAAELAKE 45 (96)
T ss_dssp EEEE--STSHHHHHHHHHHHHTTS--GGEEEEEEESSHHHHHHHHHH
T ss_pred EEEE--CCCHHHHHHHHHHHHCCC-CceeEEeeccCcHHHHHHHHHh
Confidence 3455 899999999999999884 44688855 9999887776544
|
It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D .... |
| >cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=92.88 E-value=0.28 Score=38.18 Aligned_cols=35 Identities=14% Similarity=0.263 Sum_probs=30.8
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCch
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKD 40 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~ 40 (248)
|+++|.|++.-+|..+++.|.++| +.|.++.|+.+
T Consensus 45 k~vlViG~G~~~G~~~a~~L~~~g----~~V~v~~r~~~ 79 (168)
T cd01080 45 KKVVVVGRSNIVGKPLAALLLNRN----ATVTVCHSKTK 79 (168)
T ss_pred CEEEEECCcHHHHHHHHHHHhhCC----CEEEEEECCch
Confidence 689999997778999999999999 78999998753
|
NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a |
| >TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit | Back alignment and domain information |
|---|
Probab=92.82 E-value=0.23 Score=42.13 Aligned_cols=38 Identities=18% Similarity=0.473 Sum_probs=32.6
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVE 44 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~ 44 (248)
|+++|.|. |++|+++++.|...| ++|++.+|+.++...
T Consensus 152 k~v~IiG~-G~iG~avA~~L~~~G----~~V~v~~R~~~~~~~ 189 (287)
T TIGR02853 152 SNVMVLGF-GRTGMTIARTFSALG----ARVFVGARSSADLAR 189 (287)
T ss_pred CEEEEEcC-hHHHHHHHHHHHHCC----CEEEEEeCCHHHHHH
Confidence 67899998 669999999999999 899999998765443
|
This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA. |
| >COG5322 Predicted dehydrogenase [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.80 E-value=0.39 Score=40.01 Aligned_cols=39 Identities=10% Similarity=0.071 Sum_probs=33.9
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL 45 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~ 45 (248)
++.|.|++|-||.++++.|+.++ ....++.|+.+..+..
T Consensus 169 tvaivGa~G~Ia~~Iar~la~~~----~~~~ll~r~aea~~rq 207 (351)
T COG5322 169 TVAIVGATGDIASAIARWLAPKV----GVKELLLRDAEARNRQ 207 (351)
T ss_pred eEEEecCCchHHHHHHHHhcccc----CEEEEecccHHhhhhh
Confidence 68899999999999999999998 8899999887765543
|
|
| >cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Probab=92.71 E-value=0.48 Score=40.72 Aligned_cols=40 Identities=20% Similarity=0.267 Sum_probs=34.6
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL 45 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~ 45 (248)
.+++|.|+++++|.+++..+-+.| .+|+.+.+++++.+.+
T Consensus 167 ~~vlV~g~~~~vg~~~~~~a~~~g----~~v~~~~~~~~~~~~~ 206 (341)
T cd08297 167 DWVVISGAGGGLGHLGVQYAKAMG----LRVIAIDVGDEKLELA 206 (341)
T ss_pred CEEEEECCCchHHHHHHHHHHHCC----CeEEEEeCCHHHHHHH
Confidence 378999999999999999999999 8999999988765544
|
These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha |
| >PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed | Back alignment and domain information |
|---|
Probab=92.71 E-value=1.1 Score=38.23 Aligned_cols=85 Identities=18% Similarity=0.109 Sum_probs=52.1
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHH-----------HhhcCCceeEEeeccCCchhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLAL-----------AQQHSNLHVIELDVTDFSKQQ 69 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~-----------~~~~~~~~~~~~D~~~~~~~v 69 (248)
||..+| |.|-+|..+++.|+++| ..|++.+|++++.+.+.+. .+......++..-+.+.+. +
T Consensus 1 m~Ig~I--GlG~mG~~mA~~L~~~g----~~v~v~dr~~~~~~~~~~~g~~~~~s~~~~~~~~~~advVi~~vp~~~~-~ 73 (299)
T PRK12490 1 MKLGLI--GLGKMGGNMAERLREDG----HEVVGYDVNQEAVDVAGKLGITARHSLEELVSKLEAPRTIWVMVPAGEV-T 73 (299)
T ss_pred CEEEEE--cccHHHHHHHHHHHhCC----CEEEEEECCHHHHHHHHHCCCeecCCHHHHHHhCCCCCEEEEEecCchH-H
Confidence 654555 58899999999999999 8999999998776655321 1100012344444555445 6
Q ss_pred hhHHHHhhhhhcCCCccEEEecccc
Q psy11190 70 DVLFKDISDVVKDQGLNVLVNNAGI 94 (248)
Q Consensus 70 ~~~~~~i~~~~~~~~iD~lv~~ag~ 94 (248)
+.+++.+...... =.++|+....
T Consensus 74 ~~v~~~i~~~l~~--g~ivid~st~ 96 (299)
T PRK12490 74 ESVIKDLYPLLSP--GDIVVDGGNS 96 (299)
T ss_pred HHHHHHHhccCCC--CCEEEECCCC
Confidence 7776666544331 1355665443
|
|
| >TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=92.69 E-value=0.38 Score=41.86 Aligned_cols=77 Identities=21% Similarity=0.306 Sum_probs=47.6
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCc-eEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPA-HIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
.+++|.|+ |++|..++..+...| . +|+.++++.++.+.+.++. .. .+ .|..+.+. . +.+.+..
T Consensus 178 ~~VlV~G~-g~vG~~a~~~ak~~G----~~~Vi~~~~~~~~~~~~~~~G---a~-~~--i~~~~~~~-~----~~i~~~~ 241 (358)
T TIGR03451 178 DSVAVIGC-GGVGDAAIAGAALAG----ASKIIAVDIDDRKLEWAREFG---AT-HT--VNSSGTDP-V----EAIRALT 241 (358)
T ss_pred CEEEEECC-CHHHHHHHHHHHHcC----CCeEEEEcCCHHHHHHHHHcC---Cc-eE--EcCCCcCH-H----HHHHHHh
Confidence 47899975 999999888888788 5 5989988887765553321 11 11 23333222 2 2233332
Q ss_pred cCCCccEEEecccc
Q psy11190 81 KDQGLNVLVNNAGI 94 (248)
Q Consensus 81 ~~~~iD~lv~~ag~ 94 (248)
+..++|++|.+.|.
T Consensus 242 ~~~g~d~vid~~g~ 255 (358)
T TIGR03451 242 GGFGADVVIDAVGR 255 (358)
T ss_pred CCCCCCEEEECCCC
Confidence 22258999988873
|
Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione. |
| >PRK00048 dihydrodipicolinate reductase; Provisional | Back alignment and domain information |
|---|
Probab=92.60 E-value=0.8 Score=38.13 Aligned_cols=119 Identities=13% Similarity=0.170 Sum_probs=65.9
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEE-eecCchhHH-----------HHHHHHhhcCCceeEEeeccCCchh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFA-TCRNKDKAV-----------ELLALAQQHSNLHVIELDVTDFSKQ 68 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~-~~r~~~~~~-----------~~~~~~~~~~~~~~~~~D~~~~~~~ 68 (248)
|..+.|+|++|.+|+.+++.+.+... ..++. ++++.+... .+.++.. .+. +..|++.++.
T Consensus 1 ~mkV~IiG~~G~mG~~i~~~l~~~~~---~elvav~d~~~~~~~~~~~~~i~~~~dl~~ll~---~~D-vVid~t~p~~- 72 (257)
T PRK00048 1 MIKVAVAGASGRMGRELIEAVEAAED---LELVAAVDRPGSPLVGQGALGVAITDDLEAVLA---DAD-VLIDFTTPEA- 72 (257)
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCC---CEEEEEEecCCccccccCCCCccccCCHHHhcc---CCC-EEEECCCHHH-
Confidence 44688999999999999998886431 55555 566654321 1122221 222 3477776666
Q ss_pred hhhHHHHhhhhhcCCCccEEEeccccCCc-cccCCCCChhhhhheeeecchhhHHHHHHHhHHHH
Q psy11190 69 QDVLFKDISDVVKDQGLNVLVNNAGIAAK-FTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLK 132 (248)
Q Consensus 69 v~~~~~~i~~~~~~~~iD~lv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 132 (248)
.......+.+. ++++++-..|.... ...+.+.. +..--.+..|+---+++...++..+.
T Consensus 73 ~~~~~~~al~~----G~~vvigttG~s~~~~~~l~~aa-~~~~v~~s~n~s~g~~~~~~l~~~aa 132 (257)
T PRK00048 73 TLENLEFALEH----GKPLVIGTTGFTEEQLAELEEAA-KKIPVVIAPNFSIGVNLLMKLAEKAA 132 (257)
T ss_pred HHHHHHHHHHc----CCCEEEECCCCCHHHHHHHHHHh-cCCCEEEECcchHHHHHHHHHHHHHH
Confidence 55554444442 48888777665432 00111111 23334566666666666555555544
|
|
| >cd01487 E1_ThiF_like E1_ThiF_like | Back alignment and domain information |
|---|
Probab=92.54 E-value=1.3 Score=34.64 Aligned_cols=34 Identities=21% Similarity=0.234 Sum_probs=28.1
Q ss_pred EEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchh
Q psy11190 4 ILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDK 41 (248)
Q Consensus 4 ~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~ 41 (248)
++|.| .||+|..+++.|++.|. .++.+.+.+.-+
T Consensus 2 VlViG-~GglGs~ia~~La~~Gv---g~i~lvD~D~v~ 35 (174)
T cd01487 2 VGIAG-AGGLGSNIAVLLARSGV---GNLKLVDFDVVE 35 (174)
T ss_pred EEEEC-cCHHHHHHHHHHHHcCC---CeEEEEeCCEEc
Confidence 56766 58999999999999995 579999988633
|
Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >TIGR02992 ectoine_eutC ectoine utilization protein EutC | Back alignment and domain information |
|---|
Probab=92.49 E-value=1.1 Score=38.70 Aligned_cols=44 Identities=16% Similarity=-0.027 Sum_probs=34.6
Q ss_pred ceEEEecCCCchhHHHHHHHHh-CCCCCCceEEEeecCchhHHHHHHHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVG-LGNNQPAHIFATCRNKDKAVELLALA 49 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~-~g~~~~~~V~~~~r~~~~~~~~~~~~ 49 (248)
++++|.|+ |+.++..++.|++ .+. .+|.+++|+.++.+++.+..
T Consensus 130 ~~v~iiGa-G~qA~~~~~al~~~~~i---~~v~V~~R~~~~a~~~a~~~ 174 (326)
T TIGR02992 130 SVVAIFGA-GMQARLQLEALTLVRDI---RSARIWARDSAKAEALALQL 174 (326)
T ss_pred cEEEEECC-CHHHHHHHHHHHHhCCc---cEEEEECCCHHHHHHHHHHH
Confidence 45666665 8999999999974 553 68999999999988885544
|
Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423). |
| >PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=92.47 E-value=0.35 Score=40.98 Aligned_cols=40 Identities=15% Similarity=0.297 Sum_probs=34.0
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL 45 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~ 45 (248)
|+++.|.|+ |-+|..+|..|+..| +.|++.+++++.++..
T Consensus 5 ~~~V~ViGa-G~mG~~iA~~~a~~G----~~V~l~d~~~~~~~~~ 44 (286)
T PRK07819 5 IQRVGVVGA-GQMGAGIAEVCARAG----VDVLVFETTEELATAG 44 (286)
T ss_pred ccEEEEEcc-cHHHHHHHHHHHhCC----CEEEEEECCHHHHHHH
Confidence 356777776 799999999999999 9999999999887664
|
|
| >TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=92.43 E-value=0.52 Score=39.53 Aligned_cols=39 Identities=23% Similarity=0.315 Sum_probs=30.3
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCce-EEEeecCchhHHHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAH-IFATCRNKDKAVEL 45 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~-V~~~~r~~~~~~~~ 45 (248)
++++|.|+ |++|..++..+...| .. |++++++.++.+.+
T Consensus 122 ~~VlV~G~-G~vG~~~~~~ak~~G----~~~Vi~~~~~~~r~~~a 161 (280)
T TIGR03366 122 RRVLVVGA-GMLGLTAAAAAAAAG----AARVVAADPSPDRRELA 161 (280)
T ss_pred CEEEEECC-CHHHHHHHHHHHHcC----CCEEEEECCCHHHHHHH
Confidence 47899986 899999988888888 55 88888777665443
|
This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds. |
| >PF12076 Wax2_C: WAX2 C-terminal domain; InterPro: IPR021940 This presumed domain is functionally uncharacterised | Back alignment and domain information |
|---|
Probab=92.42 E-value=0.25 Score=37.61 Aligned_cols=36 Identities=17% Similarity=0.318 Sum_probs=30.2
Q ss_pred EEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH
Q psy11190 4 ILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL 45 (248)
Q Consensus 4 ~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~ 45 (248)
++++|+++-+|+++|..|.++| .+|++. +.+.-+.+
T Consensus 1 V~L~G~~sKvaraiA~~LC~rg----v~V~m~--~~~~y~~l 36 (164)
T PF12076_consen 1 VFLTGNTSKVARAIALALCRRG----VQVVML--SKERYESL 36 (164)
T ss_pred CeecccccHHHHHHHHHHHhcC----CEEEEe--cHHHHHHH
Confidence 5789999999999999999999 899999 44444444
|
This domain is found in eukaryotes. This domain is about 170 amino acids in length. This domain is found associated with PF04116 from PFAM. This domain has a conserved LEGW sequence motif. This region has similarity to short chain dehydrogenases []. |
| >PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=92.24 E-value=0.32 Score=41.71 Aligned_cols=41 Identities=24% Similarity=0.342 Sum_probs=34.3
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHH
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELL 46 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~ 46 (248)
|+.+.|.|+ |.+|..++..|++.| ..|.+++|+++..+.+.
T Consensus 1 mmkI~iiG~-G~mG~~~a~~L~~~g----~~V~~~~r~~~~~~~~~ 41 (325)
T PRK00094 1 MMKIAVLGA-GSWGTALAIVLARNG----HDVTLWARDPEQAAEIN 41 (325)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCC----CEEEEEECCHHHHHHHH
Confidence 556777774 889999999999999 89999999987766653
|
|
| >PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase | Back alignment and domain information |
|---|
Probab=92.09 E-value=0.25 Score=43.70 Aligned_cols=38 Identities=16% Similarity=0.229 Sum_probs=31.1
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDK 41 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~ 41 (248)
|+.+.|.||||.+|+++.+.|.++.. ..|..+.++...
T Consensus 38 ~~kVaIvGATG~vG~eLlrlL~~hP~---~el~~l~s~~sa 75 (381)
T PLN02968 38 KKRIFVLGASGYTGAEVRRLLANHPD---FEITVMTADRKA 75 (381)
T ss_pred ccEEEEECCCChHHHHHHHHHHhCCC---CeEEEEEChhhc
Confidence 35789999999999999999998842 788888776443
|
|
| >cd08301 alcohol_DH_plants Plant alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=92.02 E-value=0.78 Score=40.05 Aligned_cols=77 Identities=17% Similarity=0.217 Sum_probs=47.7
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCc-eEEEeecCchhHHHHHHHHhhcCCceeEEeeccCC-chhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPA-HIFATCRNKDKAVELLALAQQHSNLHVIELDVTDF-SKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~v~~~~~~i~~~ 79 (248)
.+++|.|+ +++|..++..+...| . +|+.++++.++.+.+.++. .. .+ .|..+. ++ .... +.+.
T Consensus 189 ~~VlV~G~-g~vG~~a~q~ak~~G----~~~vi~~~~~~~~~~~~~~~G---a~-~~--i~~~~~~~~-~~~~---v~~~ 253 (369)
T cd08301 189 STVAIFGL-GAVGLAVAEGARIRG----ASRIIGVDLNPSKFEQAKKFG---VT-EF--VNPKDHDKP-VQEV---IAEM 253 (369)
T ss_pred CEEEEECC-CHHHHHHHHHHHHcC----CCeEEEEcCCHHHHHHHHHcC---Cc-eE--Ecccccchh-HHHH---HHHH
Confidence 47899975 899999888888888 6 8999999887766543321 11 11 232221 12 2222 3333
Q ss_pred hcCCCccEEEecccc
Q psy11190 80 VKDQGLNVLVNNAGI 94 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~ 94 (248)
.+. ++|+++.+.|.
T Consensus 254 ~~~-~~d~vid~~G~ 267 (369)
T cd08301 254 TGG-GVDYSFECTGN 267 (369)
T ss_pred hCC-CCCEEEECCCC
Confidence 232 59999998763
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the |
| >PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=91.96 E-value=3.3 Score=34.52 Aligned_cols=75 Identities=15% Similarity=0.192 Sum_probs=45.0
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhh--cCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQ--HSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
+++|..|+++|.-...+....... .+|+.++.+++.++...+.... ..++.++..|+.+...
T Consensus 79 ~~VLDiG~G~G~~~~~~a~~~g~~----~~v~gvD~s~~~l~~A~~~~~~~g~~~v~~~~~d~~~l~~------------ 142 (272)
T PRK11873 79 ETVLDLGSGGGFDCFLAARRVGPT----GKVIGVDMTPEMLAKARANARKAGYTNVEFRLGEIEALPV------------ 142 (272)
T ss_pred CEEEEeCCCCCHHHHHHHHHhCCC----CEEEEECCCHHHHHHHHHHHHHcCCCCEEEEEcchhhCCC------------
Confidence 478899988876443333333222 5799999998877766443322 1356666666643211
Q ss_pred hcCCCccEEEeccc
Q psy11190 80 VKDQGLNVLVNNAG 93 (248)
Q Consensus 80 ~~~~~iD~lv~~ag 93 (248)
.+..+|.++.+..
T Consensus 143 -~~~~fD~Vi~~~v 155 (272)
T PRK11873 143 -ADNSVDVIISNCV 155 (272)
T ss_pred -CCCceeEEEEcCc
Confidence 1124899987754
|
|
| >PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms [] | Back alignment and domain information |
|---|
Probab=91.93 E-value=1.4 Score=32.61 Aligned_cols=32 Identities=19% Similarity=0.262 Sum_probs=26.2
Q ss_pred EEEecCCCchhHHHHHHHHhCCCCCCceEEEeec
Q psy11190 4 ILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCR 37 (248)
Q Consensus 4 ~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r 37 (248)
+.|.|+||.||.....-+.+..+ .++|+.+.-
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d--~f~v~~Lsa 32 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPD--KFEVVALSA 32 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTT--TEEEEEEEE
T ss_pred CEEEcCCcHHHHHHHHHHHhCCC--ceEEEEEEc
Confidence 47899999999999998888873 488887654
|
In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A .... |
| >PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ] | Back alignment and domain information |
|---|
Probab=91.86 E-value=0.3 Score=38.55 Aligned_cols=39 Identities=23% Similarity=0.274 Sum_probs=30.1
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL 45 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~ 45 (248)
||+++| |.|-+|.-+|..|+++| ++|+.++.+++..+.+
T Consensus 1 M~I~Vi--GlGyvGl~~A~~lA~~G----~~V~g~D~~~~~v~~l 39 (185)
T PF03721_consen 1 MKIAVI--GLGYVGLPLAAALAEKG----HQVIGVDIDEEKVEAL 39 (185)
T ss_dssp -EEEEE----STTHHHHHHHHHHTT----SEEEEE-S-HHHHHHH
T ss_pred CEEEEE--CCCcchHHHHHHHHhCC----CEEEEEeCChHHHHHH
Confidence 777777 89999999999999999 9999999998876554
|
The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D .... |
| >PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=91.81 E-value=1.1 Score=38.18 Aligned_cols=41 Identities=20% Similarity=0.148 Sum_probs=33.6
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHH
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELL 46 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~ 46 (248)
|+++.|. |.|-+|..+++.|+++| +.|++++|++++.+++.
T Consensus 1 m~~Ig~I-GlG~mG~~mA~~l~~~G----~~V~v~d~~~~~~~~~~ 41 (296)
T PRK15461 1 MAAIAFI-GLGQMGSPMASNLLKQG----HQLQVFDVNPQAVDALV 41 (296)
T ss_pred CCeEEEE-eeCHHHHHHHHHHHHCC----CeEEEEcCCHHHHHHHH
Confidence 5455555 57889999999999999 89999999988776653
|
|
| >cd08290 ETR 2-enoyl thioester reductase (ETR) | Back alignment and domain information |
|---|
Probab=91.80 E-value=1.2 Score=38.29 Aligned_cols=35 Identities=20% Similarity=0.394 Sum_probs=30.3
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCch
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKD 40 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~ 40 (248)
++++|.|+++++|.++++.+...| ..|+.+.++.+
T Consensus 148 ~~vlI~g~~g~vg~~~~~~a~~~g----~~v~~~~~~~~ 182 (341)
T cd08290 148 DWVIQNGANSAVGQAVIQLAKLLG----IKTINVVRDRP 182 (341)
T ss_pred CEEEEccchhHHHHHHHHHHHHcC----CeEEEEEcCCC
Confidence 478999999999999999999889 78888877653
|
2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f |
| >COG3007 Uncharacterized paraquat-inducible protein B [Function unknown] | Back alignment and domain information |
|---|
Probab=91.80 E-value=1.1 Score=37.90 Aligned_cols=87 Identities=17% Similarity=0.258 Sum_probs=51.3
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEee--cCc-----hh---HHH--HHHHHhhcC-CceeEEeeccCCch
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATC--RNK-----DK---AVE--LLALAQQHS-NLHVIELDVTDFSK 67 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~--r~~-----~~---~~~--~~~~~~~~~-~~~~~~~D~~~~~~ 67 (248)
.|++||.|+|||.|.+ +|--+..| .++.-+.+. |.. .. -+. +.+.....+ ...-+..|.-+.+-
T Consensus 41 PKkVLviGaSsGyGLa-~RIsaaFG--~gAdTiGVffE~pgte~~~gtagwyn~~~f~~~A~~kGlyAksingDaFS~e~ 117 (398)
T COG3007 41 PKKVLVIGASSGYGLA-ARISAAFG--PGADTIGVFFERPGTERKPGTAGWYNNAAFKKFAKQKGLYAKSINGDAFSDEM 117 (398)
T ss_pred CceEEEEecCCcccHH-HHHHHHhC--CCCceeeEEeecCCccCCCcchhhhHHHHHHHHHHhcCceeeecccchhhHHH
Confidence 4789999999999987 34444445 224433332 211 11 111 122222222 33456778766555
Q ss_pred hhhhHHHHhhhhhcCCCccEEEeccc
Q psy11190 68 QQDVLFKDISDVVKDQGLNVLVNNAG 93 (248)
Q Consensus 68 ~v~~~~~~i~~~~~~~~iD~lv~~ag 93 (248)
-+.+++.|++.+| .+|.+|..-+
T Consensus 118 -k~kvIe~Ik~~~g--~vDlvvYSlA 140 (398)
T COG3007 118 -KQKVIEAIKQDFG--KVDLVVYSLA 140 (398)
T ss_pred -HHHHHHHHHHhhc--cccEEEEecc
Confidence 6788888999898 5999987754
|
|
| >cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1 | Back alignment and domain information |
|---|
Probab=91.65 E-value=2.9 Score=36.87 Aligned_cols=79 Identities=13% Similarity=0.245 Sum_probs=47.7
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
.+++|.| ++.+|..++..+-..|. .+|+.++++.++.+.+.+.. ...+ .+..+.++ +.+.+.+..+
T Consensus 186 ~~VlV~g-~G~vG~~~~~la~~~g~---~~vi~~~~~~~~~~~~~~~~----~~~v--i~~~~~~~----~~~~l~~~~~ 251 (386)
T cd08283 186 DTVAVWG-CGPVGLFAARSAKLLGA---ERVIAIDRVPERLEMARSHL----GAET--INFEEVDD----VVEALRELTG 251 (386)
T ss_pred CEEEEEC-CCHHHHHHHHHHHHcCC---CEEEEEcCCHHHHHHHHHcC----CcEE--EcCCcchH----HHHHHHHHcC
Confidence 3688886 58999999888888882 35888888877655544331 1222 22222211 2222333333
Q ss_pred CCCccEEEecccc
Q psy11190 82 DQGLNVLVNNAGI 94 (248)
Q Consensus 82 ~~~iD~lv~~ag~ 94 (248)
..++|+++.+.|.
T Consensus 252 ~~~~D~vld~vg~ 264 (386)
T cd08283 252 GRGPDVCIDAVGM 264 (386)
T ss_pred CCCCCEEEECCCC
Confidence 2259999998874
|
Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T |
| >cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH) | Back alignment and domain information |
|---|
Probab=91.63 E-value=0.92 Score=39.40 Aligned_cols=80 Identities=14% Similarity=0.244 Sum_probs=47.9
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCc-eEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPA-HIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
+++||+| ++++|..++..+...| . +|+.++++.++.+.+.++ +--.+ .+..+... ..+.+.+.+..
T Consensus 179 ~~vlI~g-~g~vG~~~~~lak~~G----~~~v~~~~~~~~~~~~~~~~----g~~~v--i~~~~~~~--~~~~~~i~~~~ 245 (361)
T cd08231 179 DTVVVQG-AGPLGLYAVAAAKLAG----ARRVIVIDGSPERLELAREF----GADAT--IDIDELPD--PQRRAIVRDIT 245 (361)
T ss_pred CEEEEEC-CCHHHHHHHHHHHHcC----CCeEEEEcCCHHHHHHHHHc----CCCeE--EcCccccc--HHHHHHHHHHh
Confidence 4689997 5999999998888888 7 899998887665443322 11111 22222211 11122344433
Q ss_pred cCCCccEEEecccc
Q psy11190 81 KDQGLNVLVNNAGI 94 (248)
Q Consensus 81 ~~~~iD~lv~~ag~ 94 (248)
+..++|+++.+.|.
T Consensus 246 ~~~~~d~vid~~g~ 259 (361)
T cd08231 246 GGRGADVVIEASGH 259 (361)
T ss_pred CCCCCcEEEECCCC
Confidence 32359999988764
|
This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino |
| >PRK14967 putative methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=91.55 E-value=4.1 Score=32.97 Aligned_cols=73 Identities=14% Similarity=0.073 Sum_probs=43.2
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHh-hcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQ-QHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
++|-.|+++|. ++..+++.+. .+|+.++.+++.++...+... .+.++.++..|+.+. +.
T Consensus 39 ~vLDlGcG~G~---~~~~la~~~~---~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~~d~~~~----------~~---- 98 (223)
T PRK14967 39 RVLDLCTGSGA---LAVAAAAAGA---GSVTAVDISRRAVRSARLNALLAGVDVDVRRGDWARA----------VE---- 98 (223)
T ss_pred eEEEecCCHHH---HHHHHHHcCC---CeEEEEECCHHHHHHHHHHHHHhCCeeEEEECchhhh----------cc----
Confidence 57777877654 3444555562 489999999877665533222 222455555554321 11
Q ss_pred CCCccEEEeccccC
Q psy11190 82 DQGLNVLVNNAGIA 95 (248)
Q Consensus 82 ~~~iD~lv~~ag~~ 95 (248)
....|.+++|..+.
T Consensus 99 ~~~fD~Vi~npPy~ 112 (223)
T PRK14967 99 FRPFDVVVSNPPYV 112 (223)
T ss_pred CCCeeEEEECCCCC
Confidence 12499999997654
|
|
| >PRK08291 ectoine utilization protein EutC; Validated | Back alignment and domain information |
|---|
Probab=91.47 E-value=1.8 Score=37.47 Aligned_cols=45 Identities=13% Similarity=-0.010 Sum_probs=34.5
Q ss_pred ceEEEecCCCchhHHHHHHHHh-CCCCCCceEEEeecCchhHHHHHHHHh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVG-LGNNQPAHIFATCRNKDKAVELLALAQ 50 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~-~g~~~~~~V~~~~r~~~~~~~~~~~~~ 50 (248)
++++|.|+ |+.|++.+..|.. ++. ..|.+++|+.++++.+.+..+
T Consensus 133 ~~v~IiGa-G~~a~~~~~al~~~~~~---~~V~v~~R~~~~a~~l~~~~~ 178 (330)
T PRK08291 133 SRAAVIGA-GEQARLQLEALTLVRPI---REVRVWARDAAKAEAYAADLR 178 (330)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCC---CEEEEEcCCHHHHHHHHHHHh
Confidence 45667765 7889998898885 443 789999999999888855443
|
|
| >cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=91.45 E-value=0.78 Score=38.65 Aligned_cols=36 Identities=19% Similarity=0.361 Sum_probs=29.8
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCce-EEEeecCchhHH
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAH-IFATCRNKDKAV 43 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~-V~~~~r~~~~~~ 43 (248)
+++|.| ++++|.++++.+...| .. |+++.++.++.+
T Consensus 132 ~vlI~g-~g~vg~~~~~la~~~g----~~~v~~~~~~~~~~~ 168 (312)
T cd08269 132 TVAVIG-AGFIGLLFLQLAAAAG----ARRVIAIDRRPARLA 168 (312)
T ss_pred EEEEEC-CCHHHHHHHHHHHHcC----CcEEEEECCCHHHHH
Confidence 688996 6899999999999888 77 888888876554
|
The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i |
| >PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=91.27 E-value=0.57 Score=39.60 Aligned_cols=40 Identities=13% Similarity=0.038 Sum_probs=33.5
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELL 46 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~ 46 (248)
+++.|.|+ |-+|.++|..|+++| ..|++.+++++.++...
T Consensus 4 ~kIaViGa-G~mG~~iA~~la~~G----~~V~l~d~~~~~l~~~~ 43 (287)
T PRK08293 4 KNVTVAGA-GVLGSQIAFQTAFHG----FDVTIYDISDEALEKAK 43 (287)
T ss_pred cEEEEECC-CHHHHHHHHHHHhcC----CeEEEEeCCHHHHHHHH
Confidence 56777764 889999999999999 89999999988766653
|
|
| >cd05297 GH4_alpha_glucosidase_galactosidase Glycoside Hydrolases Family 4; Alpha-glucosidases and alpha-galactosidases | Back alignment and domain information |
|---|
Probab=91.26 E-value=1.6 Score=39.22 Aligned_cols=44 Identities=9% Similarity=0.044 Sum_probs=27.6
Q ss_pred EEEecCCC-chhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHH
Q psy11190 4 ILITGCNR-GLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA 47 (248)
Q Consensus 4 ~lVtGas~-giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~ 47 (248)
+.|.||++ |-+.+++..++..-+-.+..|++.+++++.++....
T Consensus 3 IaIIGaGs~G~a~a~~~~i~~~~~~~g~eV~L~Did~e~l~~~~~ 47 (423)
T cd05297 3 IAFIGAGSVVFTKNLVGDLLKTPELSGSTIALMDIDEERLETVEI 47 (423)
T ss_pred EEEECCChHHhHHHHHHHHhcCCCCCCCEEEEECCCHHHHHHHHH
Confidence 55666655 566566556653311123799999999988776633
|
linked to 3D####ucture |
| >cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=91.26 E-value=1.4 Score=37.11 Aligned_cols=40 Identities=35% Similarity=0.564 Sum_probs=34.0
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL 45 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~ 45 (248)
.+++|.|+++++|.++++.+...| +.|+.+.++.++.+.+
T Consensus 144 ~~vlV~ga~g~~g~~~~~~a~~~g----~~v~~~~~~~~~~~~~ 183 (320)
T cd08243 144 DTLLIRGGTSSVGLAALKLAKALG----ATVTATTRSPERAALL 183 (320)
T ss_pred CEEEEEcCCChHHHHHHHHHHHcC----CEEEEEeCCHHHHHHH
Confidence 478999999999999999999999 8899998887665444
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. |
| >TIGR00243 Dxr 1-deoxy-D-xylulose 5-phosphate reductoisomerase | Back alignment and domain information |
|---|
Probab=91.25 E-value=1.6 Score=38.43 Aligned_cols=36 Identities=22% Similarity=0.310 Sum_probs=27.7
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecC
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRN 38 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~ 38 (248)
||.+.|.|+||.||.....-+.+.- ..+.|+.+.-.
T Consensus 1 Mk~i~IlGsTGSIG~qtL~Vi~~~~--~~f~v~~Laa~ 36 (389)
T TIGR00243 1 MKQIVILGSTGSIGKSTLDVVRHNP--DHFQVVALSAG 36 (389)
T ss_pred CceEEEEecChHHHHHHHHHHHhCc--cccEEEEEEcC
Confidence 8999999999999999887776543 23777776443
|
1-deoxy-D-xylulose 5-phosphate is converted to 2-C-methyl-D-erythritol 4-phosphate in the presence of NADPH. It is involved in the synthesis of isopentenyl diphosphate (IPP), a basic building block in isoprenoid, thiamin, and pyridoxal biosynthesis. |
| >PRK07340 ornithine cyclodeaminase; Validated | Back alignment and domain information |
|---|
Probab=91.19 E-value=1.2 Score=38.12 Aligned_cols=94 Identities=11% Similarity=0.101 Sum_probs=58.1
Q ss_pred ceEEEecCCCchhHHHHHHHHh-CCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVG-LGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~-~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
++++|.|+ |+.|+..++.|+. .+. .+|.+++|+.++.+++.+..+.. .+.+. . ++ .+.+ +
T Consensus 126 ~~v~IiGa-G~qa~~~~~al~~~~~~---~~v~v~~r~~~~a~~~a~~~~~~-~~~~~---~---~~-~~~a---v---- 186 (304)
T PRK07340 126 GDLLLIGT-GVQARAHLEAFAAGLPV---RRVWVRGRTAASAAAFCAHARAL-GPTAE---P---LD-GEAI---P---- 186 (304)
T ss_pred CEEEEECC-cHHHHHHHHHHHHhCCC---CEEEEEcCCHHHHHHHHHHHHhc-CCeeE---E---CC-HHHH---h----
Confidence 46777776 9999999999975 453 68999999999988885554322 11111 2 22 2221 1
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHH
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLM 122 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ 122 (248)
. ..|+||++.....| +-+ . .+...-.+|..|.+.
T Consensus 187 ~--~aDiVitaT~s~~P---l~~--~-~~~~g~hi~~iGs~~ 220 (304)
T PRK07340 187 E--AVDLVVTATTSRTP---VYP--E-AARAGRLVVAVGAFT 220 (304)
T ss_pred h--cCCEEEEccCCCCc---eeC--c-cCCCCCEEEecCCCC
Confidence 1 38999998875433 211 1 244555666666554
|
|
| >PRK05597 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=91.14 E-value=2.6 Score=36.97 Aligned_cols=34 Identities=26% Similarity=0.415 Sum_probs=28.4
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNK 39 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~ 39 (248)
++++|.|+ ||+|..+++.|+..|. .++.+++.+.
T Consensus 29 ~~VlivG~-GGlGs~~a~~La~~Gv---g~i~lvD~D~ 62 (355)
T PRK05597 29 AKVAVIGA-GGLGSPALLYLAGAGV---GHITIIDDDT 62 (355)
T ss_pred CeEEEECC-CHHHHHHHHHHHHcCC---CeEEEEeCCE
Confidence 36788876 8999999999999996 6888888764
|
|
| >PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional | Back alignment and domain information |
|---|
Probab=91.12 E-value=0.71 Score=39.36 Aligned_cols=40 Identities=25% Similarity=0.336 Sum_probs=33.5
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL 45 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~ 45 (248)
.+++|.|+++.+|..+++.+-..| ++|+.+.++.++.+.+
T Consensus 142 ~~vlI~g~~g~ig~~~~~lak~~G----~~v~~~~~~~~~~~~~ 181 (327)
T PRK10754 142 EQFLFHAAAGGVGLIACQWAKALG----AKLIGTVGSAQKAQRA 181 (327)
T ss_pred CEEEEEeCCcHHHHHHHHHHHHcC----CEEEEEeCCHHHHHHH
Confidence 378999999999999998888888 8899888887765544
|
|
| >COG2263 Predicted RNA methylase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=90.97 E-value=2 Score=34.03 Aligned_cols=72 Identities=18% Similarity=0.314 Sum_probs=50.6
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHH-HHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELL-ALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|+++=.|++.|+ .+++-.++ |+ ..|+.++.+++.++-.. ......+++.++.+|+++...
T Consensus 47 ~~V~DlG~GTG~-La~ga~~l--Ga---~~V~~vdiD~~a~ei~r~N~~~l~g~v~f~~~dv~~~~~------------- 107 (198)
T COG2263 47 KTVLDLGAGTGI-LAIGAALL--GA---SRVLAVDIDPEALEIARANAEELLGDVEFVVADVSDFRG------------- 107 (198)
T ss_pred CEEEEcCCCcCH-HHHHHHhc--CC---cEEEEEecCHHHHHHHHHHHHhhCCceEEEEcchhhcCC-------------
Confidence 355556766665 23444444 76 89999999998877663 333345689999999988665
Q ss_pred cCCCccEEEeccccC
Q psy11190 81 KDQGLNVLVNNAGIA 95 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~ 95 (248)
++|.+|.|..+.
T Consensus 108 ---~~dtvimNPPFG 119 (198)
T COG2263 108 ---KFDTVIMNPPFG 119 (198)
T ss_pred ---ccceEEECCCCc
Confidence 589999997554
|
|
| >cd05285 sorbitol_DH Sorbitol dehydrogenase | Back alignment and domain information |
|---|
Probab=90.95 E-value=1.2 Score=38.26 Aligned_cols=80 Identities=19% Similarity=0.286 Sum_probs=47.2
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCce-EEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAH-IFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
.+++|.| ++++|.+++..+-..| .. |+.+.++.++.+.+.++ +.. .+ .|..+.. ...+.+.+.+..
T Consensus 164 ~~vlI~g-~g~vG~~a~~lak~~G----~~~v~~~~~~~~~~~~~~~~---g~~-~v--i~~~~~~--~~~~~~~~~~~~ 230 (343)
T cd05285 164 DTVLVFG-AGPIGLLTAAVAKAFG----ATKVVVTDIDPSRLEFAKEL---GAT-HT--VNVRTED--TPESAEKIAELL 230 (343)
T ss_pred CEEEEEC-CCHHHHHHHHHHHHcC----CcEEEEECCCHHHHHHHHHc---CCc-EE--ecccccc--chhHHHHHHHHh
Confidence 3688876 5899999988888888 66 88888877665444332 111 11 2222211 111233344444
Q ss_pred cCCCccEEEecccc
Q psy11190 81 KDQGLNVLVNNAGI 94 (248)
Q Consensus 81 ~~~~iD~lv~~ag~ 94 (248)
+..++|+++.+.|.
T Consensus 231 ~~~~~d~vld~~g~ 244 (343)
T cd05285 231 GGKGPDVVIECTGA 244 (343)
T ss_pred CCCCCCEEEECCCC
Confidence 33359999998773
|
Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. |
| >PLN02827 Alcohol dehydrogenase-like | Back alignment and domain information |
|---|
Probab=90.93 E-value=1.2 Score=39.23 Aligned_cols=78 Identities=18% Similarity=0.203 Sum_probs=46.5
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCC-chhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDF-SKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~v~~~~~~i~~~~ 80 (248)
.+++|.|+ |++|..++..+...|+ ..|+++++++++.+.+.++ +.. .+ .|..+. +. ... .+.+..
T Consensus 195 ~~VlV~G~-G~vG~~~iqlak~~G~---~~vi~~~~~~~~~~~a~~l---Ga~-~~--i~~~~~~~~-~~~---~v~~~~ 260 (378)
T PLN02827 195 SSVVIFGL-GTVGLSVAQGAKLRGA---SQIIGVDINPEKAEKAKTF---GVT-DF--INPNDLSEP-IQQ---VIKRMT 260 (378)
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCC---CeEEEECCCHHHHHHHHHc---CCc-EE--EcccccchH-HHH---HHHHHh
Confidence 47899985 9999999888888882 3577788777665544332 111 11 233321 12 222 233332
Q ss_pred cCCCccEEEecccc
Q psy11190 81 KDQGLNVLVNNAGI 94 (248)
Q Consensus 81 ~~~~iD~lv~~ag~ 94 (248)
+. ++|++|.+.|.
T Consensus 261 ~~-g~d~vid~~G~ 273 (378)
T PLN02827 261 GG-GADYSFECVGD 273 (378)
T ss_pred CC-CCCEEEECCCC
Confidence 32 59999998874
|
|
| >PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated | Back alignment and domain information |
|---|
Probab=90.91 E-value=1.8 Score=39.78 Aligned_cols=39 Identities=15% Similarity=0.103 Sum_probs=32.2
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL 45 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~ 45 (248)
||+++| |+|-+|.++|..|+.+| +.|++.++++++.+.+
T Consensus 5 ~kIavI--G~G~MG~~iA~~la~~G----~~V~v~D~~~~~~~~~ 43 (495)
T PRK07531 5 MKAACI--GGGVIGGGWAARFLLAG----IDVAVFDPHPEAERII 43 (495)
T ss_pred CEEEEE--CcCHHHHHHHHHHHhCC----CeEEEEeCCHHHHHHH
Confidence 344445 77889999999999999 9999999998876654
|
|
| >PRK08644 thiamine biosynthesis protein ThiF; Provisional | Back alignment and domain information |
|---|
Probab=90.89 E-value=2.8 Score=33.88 Aligned_cols=35 Identities=20% Similarity=0.197 Sum_probs=28.8
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCch
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKD 40 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~ 40 (248)
++++|.| .||+|..+++.|+..|. .++.+++.+.-
T Consensus 29 ~~V~ViG-~GglGs~ia~~La~~Gv---g~i~lvD~D~v 63 (212)
T PRK08644 29 AKVGIAG-AGGLGSNIAVALARSGV---GNLKLVDFDVV 63 (212)
T ss_pred CCEEEEC-cCHHHHHHHHHHHHcCC---CeEEEEeCCEe
Confidence 3577777 58999999999999995 57999988743
|
|
| >COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=90.85 E-value=0.81 Score=39.37 Aligned_cols=40 Identities=23% Similarity=0.295 Sum_probs=32.2
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELL 46 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~ 46 (248)
+.+.|.| +|.-|.++|..|+++| +.|.+.+|+++-.+++.
T Consensus 2 ~kI~ViG-aGswGTALA~~la~ng----~~V~lw~r~~~~~~~i~ 41 (329)
T COG0240 2 MKIAVIG-AGSWGTALAKVLARNG----HEVRLWGRDEEIVAEIN 41 (329)
T ss_pred ceEEEEc-CChHHHHHHHHHHhcC----CeeEEEecCHHHHHHHH
Confidence 3455555 5678999999999999 99999999988766653
|
|
| >PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related | Back alignment and domain information |
|---|
Probab=90.81 E-value=1.1 Score=35.11 Aligned_cols=37 Identities=19% Similarity=0.299 Sum_probs=30.9
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAV 43 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~ 43 (248)
|++.|.| .|.||+++|+.|..-| ++|+..+|......
T Consensus 37 ~tvgIiG-~G~IG~~vA~~l~~fG----~~V~~~d~~~~~~~ 73 (178)
T PF02826_consen 37 KTVGIIG-YGRIGRAVARRLKAFG----MRVIGYDRSPKPEE 73 (178)
T ss_dssp SEEEEES-TSHHHHHHHHHHHHTT-----EEEEEESSCHHHH
T ss_pred CEEEEEE-EcCCcCeEeeeeecCC----ceeEEecccCChhh
Confidence 5777875 4899999999999999 99999999987543
|
All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A .... |
| >cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=90.77 E-value=1.1 Score=37.80 Aligned_cols=76 Identities=20% Similarity=0.361 Sum_probs=47.9
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
.+++|.|+++++|.+++..+...| ..|+.+.++ ++.+.+.+ . + +..+ .+... . ..+.+.+..+
T Consensus 146 ~~vli~g~~~~~g~~~~~~a~~~g----~~v~~~~~~-~~~~~~~~-~--g--~~~~-~~~~~-----~-~~~~~~~~~~ 208 (326)
T cd08272 146 QTVLIHGGAGGVGHVAVQLAKAAG----ARVYATASS-EKAAFARS-L--G--ADPI-IYYRE-----T-VVEYVAEHTG 208 (326)
T ss_pred CEEEEEcCCCcHHHHHHHHHHHcC----CEEEEEech-HHHHHHHH-c--C--CCEE-Eecch-----h-HHHHHHHhcC
Confidence 478999999999999999999999 889988877 55444322 1 1 1111 12111 1 2233343333
Q ss_pred CCCccEEEecccc
Q psy11190 82 DQGLNVLVNNAGI 94 (248)
Q Consensus 82 ~~~iD~lv~~ag~ 94 (248)
..++|.++++.|.
T Consensus 209 ~~~~d~v~~~~~~ 221 (326)
T cd08272 209 GRGFDVVFDTVGG 221 (326)
T ss_pred CCCCcEEEECCCh
Confidence 2259999998764
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate | Back alignment and domain information |
|---|
Probab=90.65 E-value=0.56 Score=35.86 Aligned_cols=35 Identities=14% Similarity=0.194 Sum_probs=30.2
Q ss_pred CCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHH
Q psy11190 9 CNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA 47 (248)
Q Consensus 9 as~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~ 47 (248)
|+|..|.++|..|+++| ..|.+.+|+++..+.+.+
T Consensus 6 GaG~~G~AlA~~la~~g----~~V~l~~~~~~~~~~i~~ 40 (157)
T PF01210_consen 6 GAGNWGTALAALLADNG----HEVTLWGRDEEQIEEINE 40 (157)
T ss_dssp SSSHHHHHHHHHHHHCT----EEEEEETSCHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHcC----CEEEEEeccHHHHHHHHH
Confidence 56788999999999999 999999999877666643
|
This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A .... |
| >COG4408 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=90.65 E-value=1.5 Score=37.62 Aligned_cols=140 Identities=19% Similarity=0.223 Sum_probs=87.5
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCC--------chhhhhH
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDF--------SKQQDVL 72 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~--------~~~v~~~ 72 (248)
|+.+|+.| +|...-.+|..|-.+|+ +++-+.+|...+.+.+.+.......+ ++....+ -. ++.+
T Consensus 4 m~~vLllG-tGpvaIQlAv~l~~h~d---~~lg~~~r~s~rse~l~qala~~~ql---~l~~q~eahr~leg~~~-id~~ 75 (431)
T COG4408 4 MLPVLLLG-TGPVAIQLAVDLSAHGD---ARLGLYNRPSTRSERLKQALALTPQL---YLQGQGEAHRQLEGSVT-IDCY 75 (431)
T ss_pred ccceeEee-cCcHHHHHHHHHHhccC---ceeeccCCCCchhHHHHHHHhcCCeE---EEEeccHHHHhhcCcee-hhHH
Confidence 45566655 56677778888888897 89999999877777775555444442 2222222 22 7778
Q ss_pred HHHhhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhH-HHHhhhhcccCCCCCCCCceEE
Q psy11190 73 FKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLP-LLKKASEANSAAPLGSSRAAIV 151 (248)
Q Consensus 73 ~~~i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~-~l~~~~~~~~~~~~~~~~~~iv 151 (248)
.++..+..++ .+.||.+..-......+..+++|.+...=.+-+.++.+-++.++. +|.+.+ .+.-+|
T Consensus 76 ~kd~a~~~~d--wqtlilav~aDaY~dvlqqi~~e~L~~vk~viLiSptfGsn~lv~~~mnk~~----------~daeVi 143 (431)
T COG4408 76 IKDLAQAVGD--WQTLILAVPADAYYDVLQQIPWEALPQVKSVILISPTFGSNLLVQNLMNKAG----------RDAEVI 143 (431)
T ss_pred HhhHHHhhch--hheEEEEeecHHHHHHHhcCCHhHhccccEEEEecccccccHHHHHHHhhhC----------CCceEE
Confidence 8888887774 787777654332225566778887777666666666665443222 333321 355677
Q ss_pred EeecCCCcc
Q psy11190 152 NVSSIMGSI 160 (248)
Q Consensus 152 ~vss~~~~~ 160 (248)
.+||=.+..
T Consensus 144 S~SsY~~dT 152 (431)
T COG4408 144 SLSSYYADT 152 (431)
T ss_pred Eeehhcccc
Confidence 777766544
|
|
| >PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=90.64 E-value=0.51 Score=40.68 Aligned_cols=40 Identities=15% Similarity=0.191 Sum_probs=32.7
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHH
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELL 46 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~ 46 (248)
|| +.|. |+|.+|.+++..|++.| +.|.+.+|+++..+.+.
T Consensus 5 m~-I~iI-G~G~mG~~ia~~L~~~G----~~V~~~~r~~~~~~~i~ 44 (328)
T PRK14618 5 MR-VAVL-GAGAWGTALAVLAASKG----VPVRLWARRPEFAAALA 44 (328)
T ss_pred Ce-EEEE-CcCHHHHHHHHHHHHCC----CeEEEEeCCHHHHHHHH
Confidence 44 4444 66899999999999999 89999999987766654
|
|
| >PRK06522 2-dehydropantoate 2-reductase; Reviewed | Back alignment and domain information |
|---|
Probab=90.51 E-value=0.56 Score=39.71 Aligned_cols=39 Identities=26% Similarity=0.253 Sum_probs=32.0
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL 45 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~ 45 (248)
|| +.|.|+ |.+|..++..|++.| ..|.+++|+.+..+.+
T Consensus 1 m~-I~IiG~-G~~G~~~a~~L~~~g----~~V~~~~r~~~~~~~~ 39 (304)
T PRK06522 1 MK-IAILGA-GAIGGLFGAALAQAG----HDVTLVARRGAHLDAL 39 (304)
T ss_pred CE-EEEECC-CHHHHHHHHHHHhCC----CeEEEEECChHHHHHH
Confidence 55 666675 899999999999999 8999999987665544
|
|
| >COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=90.42 E-value=1.1 Score=38.01 Aligned_cols=135 Identities=18% Similarity=0.167 Sum_probs=83.8
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH-HHHHh--------hcCCceeEEeeccCCchhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL-LALAQ--------QHSNLHVIELDVTDFSKQQDV 71 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~-~~~~~--------~~~~~~~~~~D~~~~~~~v~~ 71 (248)
||+.+| |.|-.|..+|..|.++| +.|.+.+|++++..+. ..... .-....++..-+.|.+. ++.
T Consensus 1 ~kIafI--GLG~MG~pmA~~L~~aG----~~v~v~~r~~~ka~~~~~~~Ga~~a~s~~eaa~~aDvVitmv~~~~~-V~~ 73 (286)
T COG2084 1 MKIAFI--GLGIMGSPMAANLLKAG----HEVTVYNRTPEKAAELLAAAGATVAASPAEAAAEADVVITMLPDDAA-VRA 73 (286)
T ss_pred CeEEEE--cCchhhHHHHHHHHHCC----CEEEEEeCChhhhhHHHHHcCCcccCCHHHHHHhCCEEEEecCCHHH-HHH
Confidence 566777 88999999999999999 9999999999884433 22110 01145667777888777 776
Q ss_pred HHH---HhhhhhcCCCccEEEeccccCCc-----------------cccCCCCChhhhhheeeecchhhHHHHHHHhHHH
Q psy11190 72 LFK---DISDVVKDQGLNVLVNNAGIAAK-----------------FTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLL 131 (248)
Q Consensus 72 ~~~---~i~~~~~~~~iD~lv~~ag~~~~-----------------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l 131 (248)
++- .+.+.... =.++|.+..+.+. -.|..--+.....-.+.+-+-|.--..+.+.|.|
T Consensus 74 V~~g~~g~~~~~~~--G~i~IDmSTisp~~a~~~a~~~~~~G~~~lDAPVsGg~~~A~~GtLtimvGG~~~~f~r~~pvl 151 (286)
T COG2084 74 VLFGENGLLEGLKP--GAIVIDMSTISPETARELAAALAAKGLEFLDAPVSGGVPGAAAGTLTIMVGGDAEAFERAKPVL 151 (286)
T ss_pred HHhCccchhhcCCC--CCEEEECCCCCHHHHHHHHHHHHhcCCcEEecCccCCchhhhhCceEEEeCCCHHHHHHHHHHH
Confidence 663 33332221 1234444333221 0111111223344577777888888888888888
Q ss_pred HhhhhcccCCCCCCCCceEEEeecC
Q psy11190 132 KKASEANSAAPLGSSRAAIVNVSSI 156 (248)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~iv~vss~ 156 (248)
..- ...|+.+...
T Consensus 152 ~~~------------g~~i~~~G~~ 164 (286)
T COG2084 152 EAM------------GKNIVHVGPV 164 (286)
T ss_pred HHh------------cCceEEECCC
Confidence 873 4557777654
|
|
| >PRK10309 galactitol-1-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=90.40 E-value=1.1 Score=38.67 Aligned_cols=39 Identities=33% Similarity=0.424 Sum_probs=31.0
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCce-EEEeecCchhHHHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAH-IFATCRNKDKAVEL 45 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~-V~~~~r~~~~~~~~ 45 (248)
++++|+| ++++|..++..+...| .. |+.++++.++.+.+
T Consensus 162 ~~vlV~G-~g~vG~~~~~~a~~~G----~~~v~~~~~~~~~~~~~ 201 (347)
T PRK10309 162 KNVIIIG-AGTIGLLAIQCAVALG----AKSVTAIDINSEKLALA 201 (347)
T ss_pred CEEEEEC-CCHHHHHHHHHHHHcC----CCeEEEECCCHHHHHHH
Confidence 4789997 5999999998888888 65 78888887765544
|
|
| >TIGR03704 PrmC_rel_meth putative protein-(glutamine-N5) methyltransferase, unknown substrate-specific | Back alignment and domain information |
|---|
Probab=90.40 E-value=2.4 Score=35.21 Aligned_cols=75 Identities=16% Similarity=0.144 Sum_probs=45.2
Q ss_pred EEEecCC-CchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhcC
Q psy11190 4 ILITGCN-RGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVKD 82 (248)
Q Consensus 4 ~lVtGas-~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~~ 82 (248)
++=.|++ |.++..+++.+- + .+|+.++.+++.++...+-.... ...++..|+.+.-. +...
T Consensus 90 vLDlg~GsG~i~l~la~~~~--~----~~v~~vDis~~al~~A~~N~~~~-~~~~~~~D~~~~l~----------~~~~- 151 (251)
T TIGR03704 90 VVDLCCGSGAVGAALAAALD--G----IELHAADIDPAAVRCARRNLADA-GGTVHEGDLYDALP----------TALR- 151 (251)
T ss_pred EEEecCchHHHHHHHHHhCC--C----CEEEEEECCHHHHHHHHHHHHHc-CCEEEEeechhhcc----------hhcC-
Confidence 4444444 557777776643 4 78999999988776653322222 24677777754211 1111
Q ss_pred CCccEEEeccccCC
Q psy11190 83 QGLNVLVNNAGIAA 96 (248)
Q Consensus 83 ~~iD~lv~~ag~~~ 96 (248)
.++|+||.|..+..
T Consensus 152 ~~fDlVv~NPPy~~ 165 (251)
T TIGR03704 152 GRVDILAANAPYVP 165 (251)
T ss_pred CCEeEEEECCCCCC
Confidence 14999999987654
|
This protein family is closely related to two different families of protein-(glutamine-N5) methyltransferase. The first is PrmB, which modifies ribosomal protein L3 in some bacteria. The second is PrmC (HemK), which modifies peptide chain release factors 1 and 2 in most bacteria and also in eukaryotes. The glutamine side chain-binding motif NPPY shared by PrmB and PrmC is N[VAT]PY in this family. The protein substrate is unknown. |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 248 | ||||
| 1sny_A | 267 | Carbonyl Reductase Sniffer Of D. Melanogaster Lengt | 5e-65 | ||
| 1yo6_A | 250 | Crystal Structure Of The Putative Carbonyl Reductas | 2e-34 | ||
| 1n5d_A | 288 | Crystal Structure Of Porcine Testicular Carbonyl Re | 6e-09 | ||
| 2pfg_A | 276 | Crystal Structure Of Human Cbr1 In Complex With Big | 1e-08 | ||
| 1wma_A | 276 | Crystal Structure Of Human Cbr1 In Complex With Hyd | 2e-08 | ||
| 1xhl_A | 297 | Crystal Structure Of Putative Tropinone Reductase-I | 2e-08 | ||
| 2pnf_A | 248 | Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl- | 3e-08 | ||
| 4b79_A | 242 | The Aeropath Project And Pseudomonas Aeruginosa Hig | 3e-07 | ||
| 3rku_A | 287 | Substrate Fingerprint And The Structure Of Nadp+ De | 7e-07 | ||
| 2nm0_A | 253 | Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl | 2e-06 | ||
| 3rih_A | 293 | Crystal Structure Of A Putative Short Chain Dehydro | 3e-06 | ||
| 4fn4_A | 254 | Short-chain Nad(h)-dependent Dehydrogenase/reductas | 4e-06 | ||
| 1ipe_A | 259 | Tropinone Reductase-Ii Complexed With Nadph Length | 5e-06 | ||
| 2ae2_A | 260 | Tropinone Reductase-Ii Complexed With Nadp+ And Pse | 5e-06 | ||
| 3sj7_A | 252 | Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) F | 8e-06 | ||
| 1ae1_A | 273 | Tropinone Reductase-I Complex With Nadp Length = 27 | 9e-06 | ||
| 1i01_A | 244 | Crystal Structure Of Beta-Ketoacyl [acyl Carrier Pr | 1e-05 | ||
| 1spx_A | 278 | Crystal Structure Of Glucose Dehydrogenase Of Caeno | 1e-05 | ||
| 4iqg_C | 271 | Crystal Structure Of Bpro0239 Oxidoreductase From P | 2e-05 | ||
| 3osu_A | 246 | Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Pro | 2e-05 | ||
| 1xkq_A | 280 | Crystal Structure Of Short-Chain DehydrogenaseREDUC | 2e-05 | ||
| 3tzc_A | 251 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 3e-05 | ||
| 3rsh_A | 251 | Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reduc | 3e-05 | ||
| 3pk0_A | 262 | Crystal Structure Of Short-Chain DehydrogenaseREDUC | 3e-05 | ||
| 1q7c_A | 244 | The Structure Of Betaketoacyl-[acp] Reductase Y151f | 4e-05 | ||
| 3rkr_A | 262 | Crystal Structure Of A Metagenomic Short-Chain Oxid | 4e-05 | ||
| 2c07_A | 285 | Oxoacyl-Acp Reductase Of Plasmodium Falciparum Leng | 6e-05 | ||
| 4fgs_A | 273 | Crystal Structure Of A Probable Dehydrogenase Prote | 6e-05 | ||
| 3tzh_A | 251 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 1e-04 | ||
| 1uzl_A | 247 | Maba From Mycobacterium Tuberculosis Length = 247 | 1e-04 | ||
| 1nff_A | 260 | Crystal Structure Of Rv2002 Gene Product From Mycob | 2e-04 | ||
| 3tzk_A | 251 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 2e-04 | ||
| 2hrb_A | 274 | Crystal Structure Of Human Carbonyl Reductase 3, Co | 2e-04 | ||
| 4iin_A | 271 | Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car | 2e-04 | ||
| 2ntn_A | 267 | Crystal Structure Of Maba-c60v/g139a/s144l Length = | 2e-04 | ||
| 4ibo_A | 271 | Crystal Structure Of A Putative Gluconate Dehydroge | 2e-04 | ||
| 3u09_A | 251 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 2e-04 | ||
| 1uzm_A | 247 | Maba From Mycobacterium Tuberculosis Length = 247 | 3e-04 | ||
| 1cyd_A | 244 | Carbonyl Reductase Complexed With Nadph And 2-Propa | 4e-04 | ||
| 4dc0_A | 281 | Crystal Structure Of F189w Actinorhodin Polyketide | 5e-04 | ||
| 3kzv_A | 254 | The Crystal Structure Of A Cytoplasmic Protein With | 5e-04 | ||
| 4e3z_A | 272 | Crystal Structure Of A Oxidoreductase From Rhizobiu | 6e-04 | ||
| 3m1a_A | 281 | The Crystal Structure Of A Short-Chain Dehydrogenas | 6e-04 | ||
| 2d1y_A | 256 | Crystal Structure Of Tt0321 From Thermus Thermophil | 7e-04 | ||
| 2hq1_A | 247 | Crystal Structure Of Orf 1438 A Putative GlucoseRIB | 9e-04 |
| >pdb|1SNY|A Chain A, Carbonyl Reductase Sniffer Of D. Melanogaster Length = 267 | Back alignment and structure |
|
| >pdb|1YO6|A Chain A, Crystal Structure Of The Putative Carbonyl Reductase Sniffer Of Caenorhabditis Elegans Length = 250 | Back alignment and structure |
|
| >pdb|1N5D|A Chain A, Crystal Structure Of Porcine Testicular Carbonyl Reductase 20beta-Hydroxysteroid Dehydrogenase Length = 288 | Back alignment and structure |
|
| >pdb|2PFG|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Bigf2 Length = 276 | Back alignment and structure |
|
| >pdb|1WMA|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Hydroxy-pp Length = 276 | Back alignment and structure |
|
| >pdb|1XHL|A Chain A, Crystal Structure Of Putative Tropinone Reductase-Ii From Caenorhabditis Elegans With Cofactor And Substrate Length = 297 | Back alignment and structure |
|
| >pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier Protein) Reductase Length = 248 | Back alignment and structure |
|
| >pdb|4B79|A Chain A, The Aeropath Project And Pseudomonas Aeruginosa High-throughput Crystallographic Studies For Assessment Of Potential Targets In Early Stage Drug Discovery. Length = 242 | Back alignment and structure |
|
| >pdb|3RKU|A Chain A, Substrate Fingerprint And The Structure Of Nadp+ Dependent Serine Dehydrogenase From Saccharomyces Cerevisiae Complexed With Nadp+ Length = 287 | Back alignment and structure |
|
| >pdb|2NM0|A Chain A, Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl Carrier Protein Reductase From Streptomyces Coelicolor A3(2) Length = 253 | Back alignment and structure |
|
| >pdb|3RIH|A Chain A, Crystal Structure Of A Putative Short Chain Dehydrogenase Or Reductase From Mycobacterium Abscessus Length = 293 | Back alignment and structure |
|
| >pdb|4FN4|A Chain A, Short-chain Nad(h)-dependent Dehydrogenase/reductase From Sulfolobus Acidocaldarius Length = 254 | Back alignment and structure |
|
| >pdb|1IPE|A Chain A, Tropinone Reductase-Ii Complexed With Nadph Length = 259 | Back alignment and structure |
|
| >pdb|2AE2|A Chain A, Tropinone Reductase-Ii Complexed With Nadp+ And Pseudotropine Length = 260 | Back alignment and structure |
|
| >pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From Staphylococcus Aureus Complex With Nadph Length = 252 | Back alignment and structure |
|
| >pdb|1AE1|A Chain A, Tropinone Reductase-I Complex With Nadp Length = 273 | Back alignment and structure |
|
| >pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein] Reductase From E. Coli. Length = 244 | Back alignment and structure |
|
| >pdb|1SPX|A Chain A, Crystal Structure Of Glucose Dehydrogenase Of Caenorhabditis Elegans In The Apo-Form Length = 278 | Back alignment and structure |
|
| >pdb|4IQG|C Chain C, Crystal Structure Of Bpro0239 Oxidoreductase From Polaromonas Sp. Js666 In Nadp Bound Form Length = 271 | Back alignment and structure |
|
| >pdb|3OSU|A Chain A, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein Reductase, Fabg, From Staphylococcus Aureus Length = 246 | Back alignment and structure |
|
| >pdb|1XKQ|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF Unknown Function From Caenorhabditis Elegans With Cofactor Length = 280 | Back alignment and structure |
|
| >pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(Y155f) From Vibrio Cholerae Length = 251 | Back alignment and structure |
|
| >pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase (Fabg) From Vibrio Cholerae O1 Complexed With Nadp+ (Space Group P62) Length = 251 | Back alignment and structure |
|
| >pdb|3PK0|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE SDR FROM Mycobacterium Smegmatis Length = 262 | Back alignment and structure |
|
| >pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant In Complex With Nadph Fragment Length = 244 | Back alignment and structure |
|
| >pdb|3RKR|A Chain A, Crystal Structure Of A Metagenomic Short-Chain Oxidoreductase (Sdr) In Complex With Nadp Length = 262 | Back alignment and structure |
|
| >pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum Length = 285 | Back alignment and structure |
|
| >pdb|4FGS|A Chain A, Crystal Structure Of A Probable Dehydrogenase Protein Length = 273 | Back alignment and structure |
|
| >pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(F187a) From Vibrio Cholerae Length = 251 | Back alignment and structure |
|
| >pdb|1UZL|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247 | Back alignment and structure |
|
| >pdb|1NFF|A Chain A, Crystal Structure Of Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260 | Back alignment and structure |
|
| >pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92a) From Vibrio Cholerae Length = 251 | Back alignment and structure |
|
| >pdb|2HRB|A Chain A, Crystal Structure Of Human Carbonyl Reductase 3, Complexed With Nadp+ Length = 274 | Back alignment and structure |
|
| >pdb|4IIN|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Helicobacter Pylori 26695 Complexed With Nad+ Length = 271 | Back alignment and structure |
|
| >pdb|2NTN|A Chain A, Crystal Structure Of Maba-c60v/g139a/s144l Length = 267 | Back alignment and structure |
|
| >pdb|4IBO|A Chain A, Crystal Structure Of A Putative Gluconate Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506446) Length = 271 | Back alignment and structure |
|
| >pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92d) From Vibrio Cholerae Length = 251 | Back alignment and structure |
|
| >pdb|1UZM|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247 | Back alignment and structure |
|
| >pdb|1CYD|A Chain A, Carbonyl Reductase Complexed With Nadph And 2-Propanol Length = 244 | Back alignment and structure |
|
| >pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide Ketoreductase With Nadph Length = 281 | Back alignment and structure |
|
| >pdb|3KZV|A Chain A, The Crystal Structure Of A Cytoplasmic Protein With Unknown Function From Saccharomyces Cerevisiae Length = 254 | Back alignment and structure |
|
| >pdb|4E3Z|A Chain A, Crystal Structure Of A Oxidoreductase From Rhizobium Etli Cfn 42 Length = 272 | Back alignment and structure |
|
| >pdb|3M1A|A Chain A, The Crystal Structure Of A Short-Chain Dehydrogenase From Streptomyces Avermitilis To 2a Length = 281 | Back alignment and structure |
|
| >pdb|2D1Y|A Chain A, Crystal Structure Of Tt0321 From Thermus Thermophilus Hb8 Length = 256 | Back alignment and structure |
|
| >pdb|2HQ1|A Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL Dehydrogenase From Clostridium Thermocellum Length = 247 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267 | Back alignment and structure |
|---|
Score = 303 bits (779), Expect = e-105
Identities = 135/247 (54%), Positives = 177/247 (71%), Gaps = 2/247 (0%)
Query: 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIEL 60
M SILITGCNRGLGLG++K L+ L P H+F TCRN+++A EL LA+ HSN+H++E+
Sbjct: 21 MNSILITGCNRGLGLGLVKALLNLPQ-PPQHLFTTCRNREQAKELEDLAKNHSNIHILEI 79
Query: 61 DVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAP 120
D+ +F D L DI V KDQGLNVL NNAGIA K R+ ++ +++ D N P
Sbjct: 80 DLRNFD-AYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVP 138
Query: 121 LMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNA 180
+ML K LPLLKKA++AN + P+G RAAI+N+SSI+GSI+ NT GG + YR SK+ALNA
Sbjct: 139 IMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNA 198
Query: 181 ATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQSLGEAHNGGFF 240
AT+SLS+DL +I+ ++HPGWVKTDMGGS+APL+V +T I+Q I LGE NGGF
Sbjct: 199 ATKSLSVDLYPQRIMCVSLHPGWVKTDMGGSSAPLDVPTSTGQIVQTISKLGEKQNGGFV 258
Query: 241 EYTGKAI 247
Y G +
Sbjct: 259 NYDGTPL 265
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250 | Back alignment and structure |
|---|
Score = 289 bits (742), Expect = 1e-99
Identities = 96/251 (38%), Positives = 142/251 (56%), Gaps = 9/251 (3%)
Query: 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIEL 60
S+++TG NRG+GLG+++ LV N + HI AT R+ +KA EL ++ S +HV+ L
Sbjct: 3 PGSVVVTGANRGIGLGLVQQLVKDKNIR--HIIATARDVEKATELKSIK--DSRVHVLPL 58
Query: 61 DVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAP 120
VT D + ++V GL++L+NNAG+ + + + VN T+
Sbjct: 59 TVTCDK-SLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSV 117
Query: 121 LMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFH----PYRCSKA 176
++LT+ +LPLLK A+ S L SRAA++ +SS +GSI DNT G YR SKA
Sbjct: 118 VLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKA 177
Query: 177 ALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQSLGEAHN 236
A+N R+L++DLK D ++ PGWV+T++GG NA L V +TA +I L +HN
Sbjct: 178 AINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKNAALTVEQSTAELISSFNKLDNSHN 237
Query: 237 GGFFEYTGKAI 247
G FF K
Sbjct: 238 GRFFMRNLKPY 248
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276 | Back alignment and structure |
|---|
Score = 138 bits (350), Expect = 4e-40
Identities = 69/269 (25%), Positives = 101/269 (37%), Gaps = 69/269 (25%)
Query: 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIE 59
+ L+TG N+G+GL +++ L L + T R+ + + L + + +
Sbjct: 4 IHVALVTGGNKGIGLAIVRDLCRL---FSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQ 60
Query: 60 LDVTDFSKQQDV--LFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNV 117
LD+ D Q + L + + GL+VLVNNAGIA K Q N
Sbjct: 61 LDIDD---LQSIRALRDFLRK--EYGGLDVLVNNAGIAFKVADPTPFH-IQAEVTMKTNF 114
Query: 118 TAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE---------------- 161
+ +LPL+K R +VNVSSIM
Sbjct: 115 FGTRDVCTELLPLIKP-----------QGR--VVNVSSIMSVRALKSCSPELQQKFRSET 161
Query: 162 --------------DNTQGGFHP--------YRCSKAALNAATRSLSIDL----KGDKII 195
++T+ G H Y +K + +R + L KGDKI+
Sbjct: 162 ITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKIL 221
Query: 196 ATAMHPGWVKTDMGGSNAPL--EVGAATA 222
A PGWV+TDM G A E GA T
Sbjct: 222 LNACCPGWVRTDMAGPKATKSPEEGAETP 250
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311 | Back alignment and structure |
|---|
Score = 124 bits (313), Expect = 2e-34
Identities = 67/313 (21%), Positives = 102/313 (32%), Gaps = 94/313 (30%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA--LAQQHSNLHVIE 59
+ ++TG N+G+G + K L G + TCR+ K E + H N+ +
Sbjct: 13 RCAVVTGGNKGIGFEICKQLSSNG----IMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQ 68
Query: 60 LDVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLK-------------- 105
LDVTD L I L++LVNNAG+A K
Sbjct: 69 LDVTDPIATMSSLADFIKT--HFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELV 126
Query: 106 ---------------PEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAI 150
E + +N +T+ ++PLL+ + I
Sbjct: 127 KIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDSPR-----------I 175
Query: 151 VNVSSIMGS----------------------------------IEDNTQG------GFHP 170
VNVSS GS ++N
Sbjct: 176 VNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAA 235
Query: 171 YRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPL--EVGAATAGIIQFI 228
Y SKA LNA TR L+ + + PG VKT+M E GA +++
Sbjct: 236 YTTSKACLNAYTRVLANKIPK--FQVNCVCPGLVKTEMNYGIGNYTAEEGAEH--VVRIA 291
Query: 229 QSLGEAHNGGFFE 241
+ +G F++
Sbjct: 292 LFPDDGPSGFFYD 304
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254 | Back alignment and structure |
|---|
Score = 109 bits (274), Expect = 4e-29
Identities = 53/208 (25%), Positives = 94/208 (45%), Gaps = 26/208 (12%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K IL+TG +RG+G ++ VL L + ++ R++ +L + + D
Sbjct: 3 KVILVTGVSRGIGKSIVDVLFSLDKD--TVVYGVARSEAPLKKLKE--KYGDRFFYVVGD 58
Query: 62 VTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAP 120
+T+ S + + ++ VK G ++ LV NAG+ + + + +N +
Sbjct: 59 ITEDSVLKQL----VNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSI 114
Query: 121 LMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNA 180
+ L LP LKK + G+ +V VSS ++ ++ G Y SKAALN
Sbjct: 115 VSLVGIALPELKKTN--------GN----VVFVSSDACNMYFSSWGA---YGSSKAALNH 159
Query: 181 ATRSLSIDLKGDKIIATAMHPGWVKTDM 208
+L+ + + + A A+ PG V TDM
Sbjct: 160 FAMTLANEERQ--VKAIAVAPGIVDTDM 185
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235 | Back alignment and structure |
|---|
Score = 108 bits (272), Expect = 4e-29
Identities = 35/221 (15%), Positives = 78/221 (35%), Gaps = 27/221 (12%)
Query: 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQH-SNLHVIE 59
+ I++TG GLG + LV G + R + L + + I
Sbjct: 3 LGHIIVTGAGSGLGRALTIGLVERG----HQVSMMGRRYQR---LQQQELLLGNAVIGIV 55
Query: 60 LDVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTA 119
D+ + DV F + ++++ AG +F +G+ EQ+ N+ +
Sbjct: 56 ADLAH-HEDVDVAFAAAVE--WGGLPELVLHCAGTG-EFGPVGVYTAEQIRRVMESNLVS 111
Query: 120 PLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALN 179
+++ + + L+ + + NV S + + Y SK +
Sbjct: 112 TILVAQQTVRLIGERG------------GVLANVLSSAAQV---GKANESLYCASKWGMR 156
Query: 180 AATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAA 220
SL +LK + ++P ++++ + ++
Sbjct: 157 GFLESLRAELKDSPLRLVNLYPSGIRSEFWDNTDHVDPSGF 197
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255 | Back alignment and structure |
|---|
Score = 107 bits (270), Expect = 2e-28
Identities = 44/216 (20%), Positives = 81/216 (37%), Gaps = 28/216 (12%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K ++ G G+GL ++ LV G A + T RN+ + +H + D
Sbjct: 9 KKAIVIGGTHGMGLATVRRLVEGG----AEVLLTGRNESNIAR--IREEFGPRVHALRSD 62
Query: 62 VTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAP 120
+ D ++ + + + G +++L NAG++ + + F VN
Sbjct: 63 IADLNEIAVL----GAAAGQTLGAIDLLHINAGVS-ELEPFDQVSEASYDRQFAVNTKGA 117
Query: 121 LMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNA 180
+ + PL+++ +IV SS+ G Y SKAAL +
Sbjct: 118 FFTVQRLTPLIREG-------------GSIVFTSSVADEG---GHPGMSVYSASKAALVS 161
Query: 181 ATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLE 216
L+ +L I ++ PG++ T G E
Sbjct: 162 FASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITE 197
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278 | Back alignment and structure |
|---|
Score = 107 bits (269), Expect = 3e-28
Identities = 58/242 (23%), Positives = 101/242 (41%), Gaps = 32/242 (13%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDK----AVELLALAQQHSNLHV 57
K +ITG + G+G + G A + T R+ ++ ++LA N++
Sbjct: 7 KVAIITGSSNGIGRATAVLFAREG----AKVTITGRHAERLEETRQQILAAGVSEQNVNS 62
Query: 58 IELDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLL---KPEQMTDHF 113
+ DVT + Q ++ +S + G L++LVNNAG A ++ E
Sbjct: 63 VVADVTTDAGQDEI----LSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATL 118
Query: 114 LVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRC 173
+N+ + + LTK +P L ++ IVN+SSI + F Y
Sbjct: 119 NLNLRSVIALTKKAVPHLSS------------TKGEIVNISSIASGLHATP--DFPYYSI 164
Query: 174 SKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQSLGE 233
+KAA++ TR+ +IDL I ++ PG V T G + E + + ++ E
Sbjct: 165 AKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPE--ETSKKFYSTMATMKE 222
Query: 234 AH 235
Sbjct: 223 CV 224
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 1e-27
Identities = 59/216 (27%), Positives = 96/216 (44%), Gaps = 32/216 (14%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K L+TG + G G + + V G+ + T R + +L+A I LD
Sbjct: 6 KVWLVTGASSGFGRAIAEAAVAAGDT----VIGTARRTEALDDLVAAY--PDRAEAISLD 59
Query: 62 VTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGL---LKPEQMTDHFLVNV 117
VTD + V +DV+ G ++VLVNNAG +G ++ D F ++V
Sbjct: 60 VTDGERIDVV----AADVLARYGRVDVLVNNAGRTQ----VGAFEETTERELRDLFELHV 111
Query: 118 TAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAA 177
P LT+ +LP +++ GS +VN+SS G + + GF Y +KAA
Sbjct: 112 FGPARLTRALLPQMRER---------GSGS--VVNISSFGGQL---SFAGFSAYSATKAA 157
Query: 178 LNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA 213
L + L+ ++ I + PG +T++ G A
Sbjct: 158 LEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGA 193
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297 | Back alignment and structure |
|---|
Score = 105 bits (263), Expect = 3e-27
Identities = 65/240 (27%), Positives = 105/240 (43%), Gaps = 30/240 (12%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKA----VELLALAQQHSNLHV 57
KS++ITG + G+G + G A + T RN+D+ ++L ++
Sbjct: 27 KSVIITGSSNGIGRSAAVIFAKEG----AQVTITGRNEDRLEETKQQILKAGVPAEKINA 82
Query: 58 IELDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGL-LKPEQMTDHFLV 115
+ DVT+ S Q D+ I+ + G +++LVNNAG E F +
Sbjct: 83 VVADVTEASGQDDI----INTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKL 138
Query: 116 NVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSK 175
N A + +T+ L K ++ IVNVSSI+ + ++ G+ Y C+K
Sbjct: 139 NFQAVIEMTQKTKEHLIK------------TKGEIVNVSSIVAGPQAHS--GYPYYACAK 184
Query: 176 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQSLGEAH 235
AAL+ TR +IDL + ++ PG V T G+ E A+ + FI S E
Sbjct: 185 AALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPE--TASDKLYSFIGSRKECI 242
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259 | Back alignment and structure |
|---|
Score = 104 bits (261), Expect = 4e-27
Identities = 40/213 (18%), Positives = 83/213 (38%), Gaps = 21/213 (9%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL---LALAQQHSNLHVI 58
++TG +RG G + L L + + + + R++ +L L Q + +
Sbjct: 7 AVCVLTGASRGFGRALAPQLARLLSPG-SVMLVSARSESMLRQLKEELGAQQPDLKVVLA 65
Query: 59 ELDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIA--AKFTRLGLLKPEQMTDHFLV 115
D+ + Q +L + +L+NNA L + ++ +++ +
Sbjct: 66 AADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWAL 125
Query: 116 NVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSK 175
N+T+ L LT L + + +VN+SS+ G+ Y K
Sbjct: 126 NLTSMLCLTSGTLNAFQDS---------PGLSKTVVNISSLCAL---QPYKGWGLYCAGK 173
Query: 176 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
AA + + L+ + ++++ A PG + DM
Sbjct: 174 AARDMLYQVLAAEEPSVRVLSYA--PGPLDNDM 204
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273 | Back alignment and structure |
|---|
Score = 103 bits (260), Expect = 7e-27
Identities = 52/205 (25%), Positives = 90/205 (43%), Gaps = 22/205 (10%)
Query: 5 LITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIELDVT 63
L+TG ++G+G +++ L GLG A ++ RN+ + E L ++ N+ D+
Sbjct: 25 LVTGGSKGIGYAIVEELAGLG----ARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLL 80
Query: 64 DFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLML 123
++D L + ++ V + LN+LVNNAG+ + N A L
Sbjct: 81 S-RTERDKLMQTVAHVFDGK-LNILVNNAGVV-IHKEAKDFTEKDYNIIMGTNFEAAYHL 137
Query: 124 TKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNAATR 183
++ PLLK S ++ +SSI G + Y SK A+N T+
Sbjct: 138 SQIAYPLLKA-----------SQNGNVIFLSSIAGFSALPSVS---LYSASKGAINQMTK 183
Query: 184 SLSIDLKGDKIIATAMHPGWVKTDM 208
SL+ + D I ++ PG + T +
Sbjct: 184 SLACEWAKDNIRVNSVAPGVILTPL 208
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266 | Back alignment and structure |
|---|
Score = 103 bits (259), Expect = 8e-27
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 28/208 (13%)
Query: 5 LITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIELDVT 63
L+TG +G+G +++ G G A I RN+ + E L+ ++ + D +
Sbjct: 18 LVTGGTKGIGHAIVEEFAGFG----AVIHTCARNEYELNECLSKWQKKGFQVTGSVCDAS 73
Query: 64 DFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLL---KPEQMTDHFLVNVTAP 120
+++ L + +S + L++L+NN G R E + H N+ +
Sbjct: 74 LRP-EREKLMQTVSSMF-GGKLDILINNLGA----IRSKPTLDYTAEDFSFHISTNLESA 127
Query: 121 LMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNA 180
L++ PLLK + G I+ +SSI G + + Y +K ALN
Sbjct: 128 YHLSQLAHPLLKAS---------GCGN--IIFMSSIAGVVSASVGS---IYSATKGALNQ 173
Query: 181 ATRSLSIDLKGDKIIATAMHPGWVKTDM 208
R+L+ + D I A A+ P + T +
Sbjct: 174 LARNLACEWASDGIRANAVAPAVIATPL 201
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260 | Back alignment and structure |
|---|
Score = 102 bits (257), Expect = 1e-26
Identities = 49/230 (21%), Positives = 91/230 (39%), Gaps = 25/230 (10%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIEL 60
+ L+TG +RG+G G+++ L LG A ++ RN+ + + L + +
Sbjct: 10 CTALVTGGSRGIGYGIVEELASLG----ASVYTCSRNQKELNDCLTQWRSKGFKVEASVC 65
Query: 61 DVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAP 120
D++ ++ L +++ LN+LVNNAGI + E + +N A
Sbjct: 66 DLSS-RSERQELMNTVANHF-HGKLNILVNNAGIV-IYKEAKDYTVEDYSLIMSINFEAA 122
Query: 121 LMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNA 180
L+ P LK S R +V +SS+ G++ + Y +K A++
Sbjct: 123 YHLSVLAHPFLKA-----------SERGNVVFISSVSGALAVPYEA---VYGATKGAMDQ 168
Query: 181 ATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQS 230
TR L+ + D I + PG + T + + +
Sbjct: 169 LTRCLAFEWAKDNIRVNGVGPGVIATSL---VEMTIQDPEQKENLNKLID 215
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273 | Back alignment and structure |
|---|
Score = 102 bits (256), Expect = 3e-26
Identities = 61/209 (29%), Positives = 85/209 (40%), Gaps = 30/209 (14%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K +ITG G+GL K V G A +F T R KD A+A+ I+ D
Sbjct: 30 KIAVITGATSGIGLAAAKRFVAEG----ARVFITGRRKDVLDA--AIAEIGGGAVGIQAD 83
Query: 62 VTDFSKQQDVLFKDISDVVKDQ--GLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTA 119
+ + D L+ + VK + ++VL NAG LG + EQ D F NV
Sbjct: 84 SAN-LAELDRLY----EKVKAEAGRIDVLFVNAGGG-SMLPLGEVTEEQYDDTFDRNVKG 137
Query: 120 PLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALN 179
L + LPLL + +++V S GS F Y SKAAL
Sbjct: 138 VLFTVQKALPLLAR-------------GSSVVLTGSTAGST---GTPAFSVYAASKAALR 181
Query: 180 AATRSLSIDLKGDKIIATAMHPGWVKTDM 208
+ R+ +DLK I + PG +T
Sbjct: 182 SFARNWILDLKDRGIRINTLSPGPTETTG 210
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324 | Back alignment and structure |
|---|
Score = 103 bits (258), Expect = 3e-26
Identities = 47/220 (21%), Positives = 87/220 (39%), Gaps = 35/220 (15%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRN-----KDKAVELLALAQQHS-NL 55
K ILITG + G G + L G G+ ++A+ R+ + A+ + +L
Sbjct: 6 KIILITGASSGFGRLTAEALAGAGHR----VYASMRDIVGRNASNVEAIAGFARDNDVDL 61
Query: 56 HVIELDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLL---KPEQMTD 111
+ELDV I ++ + G ++VL++NAG G PEQ +
Sbjct: 62 RTLELDVQSQVSVDRA----IDQIIGEDGRIDVLIHNAGHMV----FGPAEAFTPEQFAE 113
Query: 112 HFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPY 171
+ +NV + + + LP +++ ++ +SS + T PY
Sbjct: 114 LYDINVLSTQRVNRAALPHMRRQ---------KHGL--LIWISSSSSAG--GTPPYLAPY 160
Query: 172 RCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS 211
+KAA++A + +L I + + PG +
Sbjct: 161 FAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNHF 200
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327 | Back alignment and structure |
|---|
Score = 102 bits (257), Expect = 4e-26
Identities = 53/223 (23%), Positives = 86/223 (38%), Gaps = 37/223 (16%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQ----HSNLHV 57
+LITGC+ G+GL + L +Q ++AT R+ L A+ +L
Sbjct: 3 TVVLITGCSSGIGLHLAVRLAS-DPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLET 61
Query: 58 IELDVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKP------EQMTD 111
++LDV D + V + ++VLV NAG+ GLL P + +
Sbjct: 62 LQLDVRDSKSVAAAR-----ERVTEGRVDVLVCNAGL-------GLLGPLEALGEDAVAS 109
Query: 112 HFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPY 171
VNV + + + LP +K+ GS R ++ S+ G + Y
Sbjct: 110 VLDVNVVGTVRMLQAFLPDMKRR---------GSGR--VLVTGSVGGLM---GLPFNDVY 155
Query: 172 RCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAP 214
SK AL SL++ L + + + G V T
Sbjct: 156 CASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLG 198
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280 | Back alignment and structure |
|---|
Score = 101 bits (255), Expect = 4e-26
Identities = 61/216 (28%), Positives = 97/216 (44%), Gaps = 32/216 (14%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVE----LLALAQQHSNLHV 57
K+++ITG + G+G + G A++ T R+ ++ E +L ++
Sbjct: 7 KTVIITGSSNGIGRTTAILFAQEG----ANVTITGRSSERLEETRQIILKSGVSEKQVNS 62
Query: 58 IELDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFL-- 114
+ DVT Q + I+ +K G ++VLVNNAG A G +Q D +
Sbjct: 63 VVADVTTEDGQDQI----INSTLKQFGKIDVLVNNAGAA-IPDAFGTTGTDQGIDIYHKT 117
Query: 115 --VNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYR 172
+N+ A + +TK + P L S+ IVNVSSI+ + F Y
Sbjct: 118 LKLNLQAVIEMTKKVKPHLVA------------SKGEIVNVSSIVAGPQAQP--DFLYYA 163
Query: 173 CSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
+KAAL+ TRS +IDL I ++ PG V+T
Sbjct: 164 IAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGF 199
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247 | Back alignment and structure |
|---|
Score = 99.5 bits (249), Expect = 2e-25
Identities = 56/221 (25%), Positives = 93/221 (42%), Gaps = 28/221 (12%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDK----AVELLALAQQHSNLHV 57
+ IL+TG RG+G + G A + R + + ++ + Q +
Sbjct: 15 RVILVTGAARGIGAAAARAYAAHG----ASVVLLGRTEASLAEVSDQIKSAGQPQPLIIA 70
Query: 58 IELDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVN 116
+ L+ + +++ + V + G L+ L++NA I T L L E VN
Sbjct: 71 LNLENATAQQYREL----AARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVN 126
Query: 117 VTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKA 176
V A MLT+ +LPLLK+ S A+I SS +G G Y SK
Sbjct: 127 VNATFMLTRALLPLLKR-----------SEDASIAFTSSSVGRKGRANWG---AYGVSKF 172
Query: 177 ALNAATRSLSIDLKGDKII-ATAMHPGWVKTDMGGSNAPLE 216
A ++L+ +L+G + A +++PG +T M P E
Sbjct: 173 ATEGLMQTLADELEGVTAVRANSINPGATRTGMRAQAYPDE 213
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244 | Back alignment and structure |
|---|
Score = 98.8 bits (247), Expect = 3e-25
Identities = 48/235 (20%), Positives = 89/235 (37%), Gaps = 34/235 (14%)
Query: 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIEL 60
M + L+TG ++G+G ++++L+ H + NL I+
Sbjct: 4 MANYLVTGGSKGIGKAVVELLLQNK----NHTVINIDIQQSFSA--------ENLKFIKA 51
Query: 61 DVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAP 120
D+T QQD+ ++ D++K+ + + NAGI + + E + +NV +
Sbjct: 52 DLTK---QQDI--TNVLDIIKNVSFDGIFLNAGIL-IKGSIFDIDIESIKKVLDLNVWSS 105
Query: 121 LMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNA 180
+ K + LK A+IV S I + Y SK A+
Sbjct: 106 IYFIKGLENNLKV-------------GASIVFNGSDQCFI---AKPNSFAYTLSKGAIAQ 149
Query: 181 ATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQSLGEAH 235
T+SL++DL +I + PG V TD+ + + + +
Sbjct: 150 MTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEF 204
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230 | Back alignment and structure |
|---|
Score = 98.0 bits (245), Expect = 4e-25
Identities = 43/215 (20%), Positives = 83/215 (38%), Gaps = 42/215 (19%)
Query: 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQ-HSNLHVIE 59
M I+ITG + GLG + K+ G + T R++ K L + +N+
Sbjct: 1 MSLIVITGASSGLGAELAKLYDAEG----KATYLTGRSESK---LSTVTNCLSNNVGYRA 53
Query: 60 LDVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTA 119
D+ ++ + LF+ + D + +V++AG F L PEQ+ N+++
Sbjct: 54 RDLAS-HQEVEQLFEQL-----DSIPSTVVHSAGSGY-FGLLQEQDPEQIQTLIENNLSS 106
Query: 120 PLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYR-----C- 173
+ + + ++ K +V + S P C
Sbjct: 107 AINVLRELVKRYKD------------QPVNVVMIMST---------AAQQPKAQESTYCA 145
Query: 174 SKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
K A+ S+ ++LKG + A++PG + T+
Sbjct: 146 VKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEF 180
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252 | Back alignment and structure |
|---|
Score = 96.4 bits (241), Expect = 2e-24
Identities = 49/219 (22%), Positives = 87/219 (39%), Gaps = 26/219 (11%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLAL--AQQHSNLHVIE 59
+ IL+TG + G+G G A + RN++K ++ + +
Sbjct: 13 RIILVTGASDGIGREAAMTYARYG----ATVILLGRNEEKLRQVASHINEETGRQPQWFI 68
Query: 60 LDVTDFSKQQDVLFKDISDVVKDQ--GLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNV 117
LD+ ++ + ++ + L+ +++NAG+ + P+ D VNV
Sbjct: 69 LDL-LTCTSENC--QQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNV 125
Query: 118 TAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAA 177
A MLT+ +LPLL K S ++V SS +G G Y SK A
Sbjct: 126 NATFMLTQALLPLLLK-----------SDAGSLVFTSSSVGRQGRANWG---AYAASKFA 171
Query: 178 LNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLE 216
+ L+ + ++ ++PG +T M S P E
Sbjct: 172 TEGMMQVLADEY-QQRLRVNCINPGGTRTAMRASAFPTE 209
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286 | Back alignment and structure |
|---|
Score = 96.9 bits (242), Expect = 3e-24
Identities = 46/212 (21%), Positives = 86/212 (40%), Gaps = 29/212 (13%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQH--SNLHVIE 59
K +++TG ++G+G M L +G AH+ T R+K+ ++++ + ++ H I
Sbjct: 29 KKVIVTGASKGIGREMAYHLAKMG----AHVVVTARSKETLQKVVSHCLELGAASAHYIA 84
Query: 60 LDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVT 118
+ D + + ++ K G L++L+ N L + VN
Sbjct: 85 GTMEDMTFAEQF----VAQAGKLMGGLDMLILNHITNT-SLNLFHDDIHHVRKSMEVNFL 139
Query: 119 APLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAAL 178
+ ++LT LP+LK+ S +IV VSS+ G + Y SK AL
Sbjct: 140 SYVVLTVAALPMLKQ------------SNGSIVVVSSLAGKVAYPMVA---AYSASKFAL 184
Query: 179 NAATRSLSIDL--KGDKIIATAMHPGWVKTDM 208
+ S+ + + T G + T+
Sbjct: 185 DGFFSSIRKEYSVSRVNVSITLCVLGLIDTET 216
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234 | Back alignment and structure |
|---|
Score = 95.7 bits (239), Expect = 4e-24
Identities = 50/214 (23%), Positives = 83/214 (38%), Gaps = 33/214 (15%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
++LITG +RG+G ++L G + R++ + L ALA + + D
Sbjct: 6 GAVLITGASRGIGEATARLLHAKG----YRVGLMARDEKR---LQALAAELEGALPLPGD 58
Query: 62 VTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPE---QMTDHFLVNV 117
V + ++ + + G L+ LVNNAG+ + L E + D N+
Sbjct: 59 VREEGDWARA----VAAMEEAFGELSALVNNAGVG-VMKPVHELTLEEWRLVLD---TNL 110
Query: 118 TAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAA 177
T + + +P L + IVNV S+ G N G Y SK
Sbjct: 111 TGAFLGIRHAVPALLR-----------RGGGTIVNVGSLAGK---NPFKGGAAYNASKFG 156
Query: 178 LNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS 211
L + +DL+ + + PG V T G+
Sbjct: 157 LLGLAGAAMLDLREANVRVVNVLPGSVDTGFAGN 190
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250 | Back alignment and structure |
|---|
Score = 95.3 bits (238), Expect = 7e-24
Identities = 52/217 (23%), Positives = 84/217 (38%), Gaps = 39/217 (17%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDK----AVELLALAQQHSNLHV 57
+ITG ++G+G + L G + R+K E++ + V
Sbjct: 8 GLAIITGASQGIGAVIAAGLATDG----YRVVLIARSKQNLEKVHDEIMRSNKHVQEPIV 63
Query: 58 IELDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKP-----EQMTD 111
+ LD+TD +K I D+ + G +++LVN A + G L ++ +
Sbjct: 64 LPLDITDCTKADTE----IKDIHQKYGAVDILVNAAAM----FMDGSLSEPVDNFRKIME 115
Query: 112 HFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPY 171
+NV A + KT+ ++K + I NV+S G Y
Sbjct: 116 ---INVIAQYGILKTVTEIMKVQ---------KNGY--IFNVASRAAKYGFADGGI---Y 158
Query: 172 RCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
+K AL SL +L I T + PGWV TDM
Sbjct: 159 GSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDM 195
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276 | Back alignment and structure |
|---|
Score = 95.7 bits (239), Expect = 8e-24
Identities = 49/213 (23%), Positives = 94/213 (44%), Gaps = 29/213 (13%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
+ L+TG +RG+G + + L+ G A +F R+ + + + + I D
Sbjct: 30 RIALVTGGSRGIGQMIAQGLLEAG----ARVFICARDAEACADTATRLSAYGDCQAIPAD 85
Query: 62 VTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDH-----FLV 115
++ + + + + + L++LVNNAG + L E +
Sbjct: 86 LSSEAGARRL----AQALGELSARLDILVNNAGT----SWGAAL--ESYPVSGWEKVMQL 135
Query: 116 NVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSK 175
NVT+ + +LPLL+++ A+ +R ++N+ S+ G I + + Y SK
Sbjct: 136 NVTSVFSCIQQLLPLLRRS-----ASAENPAR--VINIGSVAG-ISAMGEQAY-AYGPSK 186
Query: 176 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
AAL+ +R L+ +L G+ I + PG + M
Sbjct: 187 AALHQLSRMLAKELVGEHINVNVIAPGRFPSRM 219
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281 | Back alignment and structure |
|---|
Score = 95.8 bits (239), Expect = 8e-24
Identities = 49/215 (22%), Positives = 78/215 (36%), Gaps = 31/215 (14%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
+ LITG GLG ++ V G A + ++ ++ E N + D
Sbjct: 6 EVALITGGASGLGRALVDRFVAEG----ARVAVLDKSAERLRE--LEVAHGGNAVGVVGD 59
Query: 62 VTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHF----LVN 116
V Q+ + G ++ L+ NAGI T L L +++ F VN
Sbjct: 60 VRSLQDQKRA----AERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVN 115
Query: 117 VTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKA 176
V + K LP L SR ++V S G GG Y +K
Sbjct: 116 VKGYIHAVKACLPALVS------------SRGSVVFTISNAGFY---PNGGGPLYTATKH 160
Query: 177 ALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS 211
A+ R ++ +L + + PG + TD+ G
Sbjct: 161 AVVGLVRQMAFEL-APHVRVNGVAPGGMNTDLRGP 194
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244 | Back alignment and structure |
|---|
Score = 94.1 bits (235), Expect = 2e-23
Identities = 46/210 (21%), Positives = 89/210 (42%), Gaps = 34/210 (16%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
L+TG +G+G +K L G A + A R +L++LA++ + + +D
Sbjct: 8 LRALVTGAGKGIGRDTVKALHASG----AKVVAVTRTNS---DLVSLAKECPGIEPVCVD 60
Query: 62 VTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIA--AKFTRLGLLKPEQMTDHFLVNVT 118
+ D+ + G +++LVNNA + F + E F VN+
Sbjct: 61 LGDWD--------ATEKALGGIGPVDLLVNNAALVIMQPFLEV---TKEAFDRSFSVNLR 109
Query: 119 APLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAAL 178
+ +++ + + +IVNVSS++ + T Y +K A+
Sbjct: 110 SVFQVSQMVARDMINRG----------VPGSIVNVSSMVAHV---TFPNLITYSSTKGAM 156
Query: 179 NAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
T++++++L KI +++P V TDM
Sbjct: 157 TMLTKAMAMELGPHKIRVNSVNPTVVLTDM 186
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244 | Back alignment and structure |
|---|
Score = 94.1 bits (235), Expect = 2e-23
Identities = 49/209 (23%), Positives = 89/209 (42%), Gaps = 30/209 (14%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
+ +L+TG +G+G G ++ L G A + A R + +L +L ++ + + +D
Sbjct: 8 RRVLVTGAGKGIGRGTVQALHATG----ARVVAVSRTQA---DLDSLVRECPGIEPVCVD 60
Query: 62 VTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAP 120
+ D+ + G +++LVNNA +A + E F VN+ A
Sbjct: 61 LGDWE--------ATERALGSVGPVDLLVNNAAVA-LLQPFLEVTKEAFDRSFEVNLRAV 111
Query: 121 LMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNA 180
+ +++ + L G+ IVNVSS Y +K AL+
Sbjct: 112 IQVSQIVARGLIARGVP------GA----IVNVSSQCSQR---AVTNHSVYCSTKGALDM 158
Query: 181 ATRSLSIDLKGDKIIATAMHPGWVKTDMG 209
T+ ++++L KI A++P V T MG
Sbjct: 159 LTKVMALELGPHKIRVNAVNPTVVMTSMG 187
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207 | Back alignment and structure |
|---|
Score = 92.6 bits (231), Expect = 3e-23
Identities = 34/210 (16%), Positives = 66/210 (31%), Gaps = 38/210 (18%)
Query: 4 ILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVT 63
+LITG GLG + L G + + R L LA++ + D+
Sbjct: 3 VLITGATGGLGGAFARALKG------HDLLLSGRRAGA---LAELAREVG-ARALPADLA 52
Query: 64 DFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLM 122
D + ++++ G L++LV+ G A + + + + ++
Sbjct: 53 DEL--------EAKALLEEAGPLDLLVHAVGKAG-RASVREAGRDLVEEMLAAHLLTAAF 103
Query: 123 LTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNAAT 182
+ K A V + + GF Y +K AL A
Sbjct: 104 VLKHARF---------------QKGARAVFFGAYPRYV---QVPGFAAYAAAKGALEAYL 145
Query: 183 RSLSIDLKGDKIIATAMHPGWVKTDMGGSN 212
+ +L + + + V T +
Sbjct: 146 EAARKELLREGVHLVLVRLPAVATGLWAPL 175
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245 | Back alignment and structure |
|---|
Score = 93.4 bits (233), Expect = 3e-23
Identities = 46/208 (22%), Positives = 85/208 (40%), Gaps = 31/208 (14%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K ++TG G+G+ ++K L + ++A RN + L ALA+ + IE D
Sbjct: 6 KIAVVTGATGGMGIEIVKDLS-----RDHIVYALGRNPEH---LAALAEIE-GVEPIESD 56
Query: 62 VTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAP 120
+ + + D +K+ ++ LV+ A +A + T + + H +NV P
Sbjct: 57 IVK---EVLE--EGGVDKLKNLDHVDTLVHAAAVA-RDTTIEAGSVAEWHAHLDLNVIVP 110
Query: 121 LMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNA 180
L++ +LP L+ AS ++ ++S G+ Y SK AL
Sbjct: 111 AELSRQLLPALRAAS------------GCVIYINSGAGNGPHPGNTI---YAASKHALRG 155
Query: 181 ATRSLSIDLKGDKIIATAMHPGWVKTDM 208
+ + + I + + PG T M
Sbjct: 156 LADAFRKEEANNGIRVSTVSPGPTNTPM 183
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260 | Back alignment and structure |
|---|
Score = 93.3 bits (233), Expect = 4e-23
Identities = 49/209 (23%), Positives = 90/209 (43%), Gaps = 24/209 (11%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIEL 60
K L+T G+GL + + L G AH+ + R ++ +A L + ++
Sbjct: 15 KVALVTASTDGIGLAIARRLAQDG----AHVVVSSRKQENVDRTVATLQGEGLSVTGTVC 70
Query: 61 DVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTA 119
V ++ + ++ V G +++LV+NA + F + E VNV A
Sbjct: 71 HVGKAEDRERL----VAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKA 126
Query: 120 PLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALN 179
+++TK ++P ++K G ++ VSS+ G PY SK AL
Sbjct: 127 TVLMTKAVVPEMEKR---------GGGS--VLIVSSVGAYHPFPNLG---PYNVSKTALL 172
Query: 180 AATRSLSIDLKGDKIIATAMHPGWVKTDM 208
T++L+++L I + PG +KT+
Sbjct: 173 GLTKNLAVELAPRNIRVNCLAPGLIKTNF 201
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254 | Back alignment and structure |
|---|
Score = 92.3 bits (230), Expect = 8e-23
Identities = 46/209 (22%), Positives = 77/209 (36%), Gaps = 28/209 (13%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHV--IE 59
K+++ G+GL + LV F + L L + +++
Sbjct: 6 KNVIFVAALGGIGLDTSRELVKRN----LKNFVILDRVENPTALAELKAINPKVNITFHT 61
Query: 60 LDVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTA 119
DVT + L K I D +K +++L+N AGI L Q+ +N T
Sbjct: 62 YDVTVPVAESKKLLKKIFDQLK--TVDILINGAGI---------LDDHQIERTIAINFTG 110
Query: 120 PLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALN 179
+ T +L K G I N+ S+ G Y SKAA+
Sbjct: 111 LVNTTTAILDFWDKRK--------GGPGGIIANICSVTGFN---AIHQVPVYSASKAAVV 159
Query: 180 AATRSLSIDLKGDKIIATAMHPGWVKTDM 208
+ T SL+ + A +++PG +T +
Sbjct: 160 SFTNSLAKLAPITGVTAYSINPGITRTPL 188
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270 | Back alignment and structure |
|---|
Score = 92.6 bits (231), Expect = 8e-23
Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 29/209 (13%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K +++TG RG+G G+++ V G A + +++ AL Q+ I D
Sbjct: 10 KVVVVTGGGRGIGAGIVRAFVNSG----ARVVICDKDESGG---RALEQELPGAVFILCD 62
Query: 62 VTDFSKQQDVLFKDISDVVKDQ--GLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTA 119
VT + DV K + + L+ +VNNAG R + +N+
Sbjct: 63 VTQ---EDDV--KTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLG 117
Query: 120 PLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALN 179
LTK LP L+K S+ ++N+SS++G+I Q PY +K A+
Sbjct: 118 TYTLTKLALPYLRK------------SQGNVINISSLVGAI---GQAQAVPYVATKGAVT 162
Query: 180 AATRSLSIDLKGDKIIATAMHPGWVKTDM 208
A T++L++D + + PG + T +
Sbjct: 163 AMTKALALDESPYGVRVNCISPGNIWTPL 191
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264 | Back alignment and structure |
|---|
Score = 92.6 bits (231), Expect = 8e-23
Identities = 43/236 (18%), Positives = 93/236 (39%), Gaps = 25/236 (10%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIEL 60
K ++I+G LG + + G A + R ++ ++ + +
Sbjct: 12 KVVVISGVGPALGTTLARRCAEQG----ADLVLAARTVERLEDVAKQVTDTGRRALSVGT 67
Query: 61 DVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTA 119
D+TD ++ + + + +K G ++V++NNA E M D + V
Sbjct: 68 DITDDAQVAHL----VDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFG 123
Query: 120 PLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALN 179
L L + P L+++ G+ +VNV+S++ +Q + Y+ +K+AL
Sbjct: 124 ALRLIQGFTPALEESK--------GA----VVNVNSMVVRH---SQAKYGAYKMAKSALL 168
Query: 180 AATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQSLGEAH 235
A +++L+ +L I ++ PG++ S + G + +
Sbjct: 169 AMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGS 224
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319 | Back alignment and structure |
|---|
Score = 93.2 bits (232), Expect = 1e-22
Identities = 43/214 (20%), Positives = 85/214 (39%), Gaps = 21/214 (9%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKD---KAVELLALAQQHSNLHVI 58
++ +TG G+G+G+++ L+ G + +D KA+ L + +
Sbjct: 9 RTAFVTGGANGVGIGLVRQLLNQG----CKVAIADIRQDSIDKALATLEAEGSGPEVMGV 64
Query: 59 ELDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNV 117
+LDV + +V G +++L NNAG+ F + + VN+
Sbjct: 65 QLDVASREGFKMA----ADEVEARFGPVSILCNNAGVNL-FQPIEESSYDDWDWLLGVNL 119
Query: 118 TAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAA 177
+ T +P + + +A +VN +S+ + + G Y +K A
Sbjct: 120 HGVVNGVTTFVPRMVERVKAGEQKG-----GHVVNTASMAAFLAAGSPG---IYNTTKFA 171
Query: 178 LNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS 211
+ + SL L +I + + PG VK+ + S
Sbjct: 172 VRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYAS 205
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279 | Back alignment and structure |
|---|
Score = 92.3 bits (230), Expect = 1e-22
Identities = 50/217 (23%), Positives = 85/217 (39%), Gaps = 33/217 (15%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL---LALAQQHSNLHVI 58
+ L+TG + G+G + + LV G + R EL A L
Sbjct: 33 RLALVTGASGGIGAAVARALVQQG----LKVVGCARTVGNIEELAAECKSAGYPGTLIPY 88
Query: 59 ELDVTDFSKQQDV--LFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPE---QMTDHF 113
D+++ ++D+ +F I + G+++ +NNAG+ A+ L M +
Sbjct: 89 RCDLSN---EEDILSMFSAIRS--QHSGVDICINNAGL-ARPDTLLSGSTSGWKDMFN-- 140
Query: 114 LVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRC 173
VNV A + T+ +K+ I+N++S+ G H Y
Sbjct: 141 -VNVLALSICTREAYQSMKER---------NVDDGHIININSMSG-HRVLPLSVTHFYSA 189
Query: 174 SKAALNAATRSLSIDL--KGDKIIATAMHPGWVKTDM 208
+K A+ A T L +L I AT + PG V+T
Sbjct: 190 TKYAVTALTEGLRQELREAQTHIRATCISPGVVETQF 226
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262 | Back alignment and structure |
|---|
Score = 91.9 bits (229), Expect = 1e-22
Identities = 48/212 (22%), Positives = 85/212 (40%), Gaps = 30/212 (14%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIEL 60
+ ++TG +RG+G + + L LG A + T R+ +K + +
Sbjct: 30 QVAVVTGASRGIGAAIARKLGSLG----ARVVLTARDVEKLRAVEREIVAAGGEAESHAC 85
Query: 61 DVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQ---MTDHFLVN 116
D++ + V+ G +VLVNNAG+ L +KP + + VN
Sbjct: 86 DLSHSDAIAAF----ATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIA---VN 138
Query: 117 VTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKA 176
+ AP +L + P + A I+N+SS+ G Y SK
Sbjct: 139 LKAPYLLLRAFAPAMIAA---------KRGH--IINISSLAGKNPVADGA---AYTASKW 184
Query: 177 ALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
LN S + +L+ ++ + + PG V+T+
Sbjct: 185 GLNGLMTSAAEELRQHQVRVSLVAPGSVRTEF 216
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272 | Back alignment and structure |
|---|
Score = 91.9 bits (229), Expect = 2e-22
Identities = 48/212 (22%), Positives = 79/212 (37%), Gaps = 28/212 (13%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQ-HSNLHVIEL 60
+ +LITG G+G L + + NK E A + + +H +
Sbjct: 32 EIVLITGAGHGIGRLTAYEFAKLK----SKLVLWDINKHGLEETAAKCKGLGAKVHTFVV 87
Query: 61 DVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTA 119
D ++ V + G +++LVNNAG+ + L + Q+ F VNV A
Sbjct: 88 DCSNREDIYSS----AKKVKAEIGDVSILVNNAGVVY-TSDLFATQDPQIEKTFEVNVLA 142
Query: 120 PLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALN 179
TK LP + K ++ IV V+S G + Y SK A
Sbjct: 143 HFWTTKAFLPAMTK-----------NNHGHIVTVASAAGHVSVPFLL---AYCSSKFAAV 188
Query: 180 AATRSLSIDLKG---DKIIATAMHPGWVKTDM 208
++L+ +L + T + P +V T
Sbjct: 189 GFHKTLTDELAALQITGVKTTCLCPNFVNTGF 220
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251 | Back alignment and structure |
|---|
Score = 91.2 bits (227), Expect = 2e-22
Identities = 27/210 (12%), Positives = 60/210 (28%), Gaps = 38/210 (18%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K+IL+ G + LG ++K + + ++ + H +
Sbjct: 23 KNILVLGGSGALGAEVVKFFKSKS----WNTISIDFRENPNAD-----------HSFTIK 67
Query: 62 VTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAP 120
+ + + V I + ++ V AG + + + +N+ +
Sbjct: 68 DSGEEEIKSV----IEKINSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSA 123
Query: 121 LMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNA 180
LL + V + N G Y +KAA +
Sbjct: 124 FASAHIGAKLLNQ-------------GGLFVLTGASAAL---NRTSGMIAYGATKAATHH 167
Query: 181 ATRSLSIDLKG--DKIIATAMHPGWVKTDM 208
+ L+ + G + + P + T
Sbjct: 168 IIKDLASENGGLPAGSTSLGILPVTLDTPT 197
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287 | Back alignment and structure |
|---|
Score = 92.0 bits (229), Expect = 2e-22
Identities = 58/216 (26%), Positives = 96/216 (44%), Gaps = 35/216 (16%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQ------HSNL 55
K++LITG + G+G + N + R +K L L + ++ +
Sbjct: 34 KTVLITGASAGIGKATALEYLEASNGD-MKLILAARRLEK---LEELKKTIDQEFPNAKV 89
Query: 56 HVIELDVTDFSKQQDVLFKDISDVVKD-QGLNVLVNNAGIAAKFTRLGLLKPE---QMTD 111
HV +LD+T K + I ++ ++ + +++LVNNAG A R+G + E + D
Sbjct: 90 HVAQLDITQAEKIKPF----IENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFD 145
Query: 112 HFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPY 171
NVTA + +T+ +LP+ + + IVN+ SI G Y
Sbjct: 146 ---TNVTALINITQAVLPIFQA-----------KNSGDIVNLGSIAGRD---AYPTGSIY 188
Query: 172 RCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTD 207
SK A+ A T SL +L KI + PG V+T+
Sbjct: 189 CASKFAVGAFTDSLRKELINTKIRVILIAPGLVETE 224
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260 | Back alignment and structure |
|---|
Score = 91.1 bits (227), Expect = 3e-22
Identities = 38/211 (18%), Positives = 68/211 (32%), Gaps = 30/211 (14%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
ILITG ++ +GL L+ G + + R + +V L A + D
Sbjct: 28 APILITGASQRVGLHCALRLLEHG----HRVIISYRTEHASVTELRQA----GAVALYGD 79
Query: 62 VTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAP 120
+ + I + L +V+NA + + T F V++ AP
Sbjct: 80 FSCETGIMAF----IDLLKTQTSSLRAVVHNASEW--LAETPGEEADNFTRMFSVHMLAP 133
Query: 121 LMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNA 180
++ PLL + A IV++S + Y +KA L +
Sbjct: 134 YLINLHCEPLLTAS-----------EVADIVHISDDVT---RKGSSKHIAYCATKAGLES 179
Query: 181 ATRSLSIDLKGDKIIATAMHPGWVKTDMGGS 211
T S + + + P +
Sbjct: 180 LTLSFAARF-APLVKVNGIAPALLMFQPKDD 209
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246 | Back alignment and structure |
|---|
Score = 90.6 bits (226), Expect = 4e-22
Identities = 48/211 (22%), Positives = 79/211 (37%), Gaps = 37/211 (17%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K I++T +G+G G A + AT N+ K EL +++ + LD
Sbjct: 7 KVIILTAAAQGIGQAAALAFAREG----AKVIATDINESKLQEL----EKYPGIQTRVLD 58
Query: 62 VTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLL---KPEQMTDHFLVNV 117
VT K I + L+VL N AG G + + + +NV
Sbjct: 59 VTKK--------KQIDQFANEVERLDVLFNVAGF----VHHGTVLDCEEKDWDFSMNLNV 106
Query: 118 TAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAA 177
+ ++ K LP + I+N+SS+ S++ Y +KAA
Sbjct: 107 RSMYLMIKAFLPKMLAQK-----------SGNIINMSSVASSVKGVV--NRCVYSTTKAA 153
Query: 178 LNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
+ T+S++ D I + PG V T
Sbjct: 154 VIGLTKSVAADFIQQGIRCNCVCPGTVDTPS 184
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260 | Back alignment and structure |
|---|
Score = 90.7 bits (226), Expect = 4e-22
Identities = 42/229 (18%), Positives = 88/229 (38%), Gaps = 24/229 (10%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIEL 60
+ ++TG + +GL + L G A + ++ A + + L + ++ + +
Sbjct: 14 RVAIVTGGAQNIGLACVTALAEAG----ARVIIADLDEAMATKAVEDLRMEGHDVSSVVM 69
Query: 61 DVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTA 119
DVT+ Q+ + V + +G +++LV AGI + + Q +N+
Sbjct: 70 DVTNTESVQNA----VRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNG 125
Query: 120 PLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALN 179
+ + ++ + IV + S+ G I N Y SKA ++
Sbjct: 126 MFRSCQAVGRIMLEQ---------KQGV--IVAIGSMSGLI-VNRPQQQAAYNASKAGVH 173
Query: 180 AATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFI 228
RSL+ + I A A+ P +++T + + +E I
Sbjct: 174 QYIRSLAAEWAPHGIRANAVAPTYIETTL--TRFGMEKPELYDAWIAGT 220
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261 | Back alignment and structure |
|---|
Score = 89.9 bits (224), Expect = 9e-22
Identities = 51/229 (22%), Positives = 87/229 (37%), Gaps = 23/229 (10%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K LITG G G GM K G A + R+K A + + D
Sbjct: 10 KVALITGAGSGFGEGMAKRFAKGG----AKVVIVDRDKAGAER--VAGEIGDAALAVAAD 63
Query: 62 VTDFSKQQDVLFKDISDVVKDQ--GLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTA 119
++ + DV + + +++LVNNAGI K L++PE+ VNV
Sbjct: 64 ISK---EADV--DAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRG 118
Query: 120 PLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALN 179
++T ++P K+ I+NV+S + Y +K +
Sbjct: 119 VYLMTSKLIPHFKENGA-------KGQECVILNVASTGAGR---PRPNLAWYNATKGWVV 168
Query: 180 AATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFI 228
+ T++L+I+L KI A++P +T + + + I
Sbjct: 169 SVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSI 217
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272 | Back alignment and structure |
|---|
Score = 90.0 bits (224), Expect = 1e-21
Identities = 50/208 (24%), Positives = 75/208 (36%), Gaps = 23/208 (11%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K ++TG G+G + L G G + R D E A + + D
Sbjct: 29 KIAIVTGAGSGVGRAVAVALAGAG----YGVALAGRRLDALQETAAEI--GDDALCVPTD 82
Query: 62 VTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAP 120
VTD LF V+ G ++VL NNAG A + L Q N+T P
Sbjct: 83 VTD-PDSVRALFTA---TVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGP 138
Query: 121 LMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNA 180
+ T+ ++K I+N SI + + PY +K A+
Sbjct: 139 FLCTQEAFRVMKAQ---------EPRGGRIINNGSISATS---PRPYSAPYTATKHAITG 186
Query: 181 ATRSLSIDLKGDKIIATAMHPGWVKTDM 208
T+S S+D + I + G T M
Sbjct: 187 LTKSTSLDGRVHDIACGQIDIGNADTPM 214
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281 | Back alignment and structure |
|---|
Score = 89.9 bits (224), Expect = 1e-21
Identities = 45/212 (21%), Positives = 82/212 (38%), Gaps = 27/212 (12%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDK----AVELLALAQQHSNLHV 57
++ L+TG G+G G+ LV G A + RN DK EL AL +
Sbjct: 12 RTYLVTGGGSGIGKGVAAGLVAAG----ASVMIVGRNPDKLAGAVQELEALGANGGAIRY 67
Query: 58 IELDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVN 116
D+T+ + + V G L+ +V+ AG + + + E +N
Sbjct: 68 EPTDITNEDETARA----VDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLN 123
Query: 117 VTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKA 176
V + + K + + + V +SSI S T F Y +K+
Sbjct: 124 VNGTMYVLKHAAREMVRGG-----------GGSFVGISSIAASN---THRWFGAYGVTKS 169
Query: 177 ALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
A++ + + +L + ++ PG ++TD+
Sbjct: 170 AVDHLMQLAADELGASWVRVNSIRPGLIRTDL 201
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272 | Back alignment and structure |
|---|
Score = 89.2 bits (222), Expect = 2e-21
Identities = 49/213 (23%), Positives = 87/213 (40%), Gaps = 34/213 (15%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQ---HSNLHVI 58
++ ITG G G + G + T R +++ L ALA + + + +
Sbjct: 22 STLFITGATSGFGEACARRFAEAG----WSLVLTGRREER---LQALAGELSAKTRVLPL 74
Query: 59 ELDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPE---QMTDHFL 114
LDV D + + + ++ ++ L L+NNAG+A + M D
Sbjct: 75 TLDVRD----RAAMSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVD--- 127
Query: 115 VNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCS 174
N+ L T+ +LP L + A+IVN+ S+ G G H Y +
Sbjct: 128 TNIKGLLYSTRLLLPRLIAH----------GAGASIVNLGSVAGKW---PYPGSHVYGGT 174
Query: 175 KAALNAATRSLSIDLKGDKIIATAMHPGWVKTD 207
KA + + +L DL+G + T + PG +++
Sbjct: 175 KAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESE 207
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248 | Back alignment and structure |
|---|
Score = 88.0 bits (219), Expect = 3e-21
Identities = 47/209 (22%), Positives = 88/209 (42%), Gaps = 33/209 (15%)
Query: 4 ILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHS-NLHVIELDV 62
+L+TG G G + + + G + AT R +++ L L + NL++ +LDV
Sbjct: 3 VLVTGATAGFGECITRRFIQQG----HKVIATGRRQER---LQELKDELGDNLYIAQLDV 55
Query: 63 TDFSKQQDVLFKDISDVVKD-QGLNVLVNNAGIAAKFTRLGLLKPE---QMTDHFLVNVT 118
+ + + + ++ + + +++LVNNAG+A E M D N
Sbjct: 56 RN----RAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMID---TNNK 108
Query: 119 APLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAAL 178
+ +T+ +LP + + + I+N+ S GS G + Y +KA +
Sbjct: 109 GLVYMTRAVLPGMVE-----------RNHGHIINIGSTAGSW---PYAGGNVYGATKAFV 154
Query: 179 NAATRSLSIDLKGDKIIATAMHPGWVKTD 207
+ +L DL G + T + PG V
Sbjct: 155 RQFSLNLRTDLHGTAVRVTDIEPGLVGGT 183
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251 | Back alignment and structure |
|---|
Score = 87.5 bits (218), Expect = 4e-21
Identities = 49/210 (23%), Positives = 81/210 (38%), Gaps = 25/210 (11%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K +ITG G+GL + V G A + T R+ D + + + D
Sbjct: 7 KVAIITGGTLGIGLAIATKFVEEG----AKVMITGRHSDVGEKAAKSVGTPDQIQFFQHD 62
Query: 62 VTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAP 120
+D + K G ++ LVNNAGI A + + VN+
Sbjct: 63 SSDEDGWTKL----FDATEKAFGPVSTLVNNAGI-AVNKSVEETTTAEWRKLLAVNLDGV 117
Query: 121 LMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNA 180
T+ + +K G+S I+N+SSI G + Y SK A+
Sbjct: 118 FFGTRLGIQRMKNKGL-------GAS---IINMSSIEGFV---GDPSLGAYNASKGAVRI 164
Query: 181 ATRSLSIDL--KGDKIIATAMHPGWVKTDM 208
++S ++D K + +HPG++KT +
Sbjct: 165 MSKSAALDCALKDYDVRVNTVHPGYIKTPL 194
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241 | Back alignment and structure |
|---|
Score = 87.4 bits (217), Expect = 5e-21
Identities = 25/209 (11%), Positives = 68/209 (32%), Gaps = 32/209 (15%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
+ +L+ G LG ++ + + +++ ++++
Sbjct: 8 RRVLVYGGRGALGSRCVQAFRARN----WWVASIDVVENEEASAS---------VIVKMT 54
Query: 62 VTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPL 121
+ ++Q D + ++ ++ DQ ++ ++ AG A + + ++
Sbjct: 55 DSF-TEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTST 113
Query: 122 MLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNAA 181
+ + LK+ + + + G Y +K A++
Sbjct: 114 ISSHLATKHLKEGG-------------LLTLAGAKAA---LDGTPGMIGYGMAKGAVHQL 157
Query: 182 TRSLSIDLKG--DKIIATAMHPGWVKTDM 208
+SL+ G A A+ P + T M
Sbjct: 158 CQSLAGKNSGMPSGAAAIAVLPVTLDTPM 186
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255 | Back alignment and structure |
|---|
Score = 87.2 bits (217), Expect = 7e-21
Identities = 44/228 (19%), Positives = 80/228 (35%), Gaps = 30/228 (13%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIEL 60
K +ITG G+G + G A + + N D A ++ + Q
Sbjct: 12 KCAIITGAGAGIGKEIAITFATAG----ASVVVSDINADAANHVVDEIQQLGGQAFACRC 67
Query: 61 DVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLL--KPEQMTDHFLVNV 117
D+T + + + G +++LVNNAG + +NV
Sbjct: 68 DITSEQELSAL----ADFAISKLGKVDILVNNAGG----GGPKPFDMPMADFRRAYELNV 119
Query: 118 TAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAA 177
+ L++ + P ++K G I+ ++S+ ++ Y SKAA
Sbjct: 120 FSFFHLSQLVAPEMEKN---------GGGV--ILTITSMAAENKNINMT---SYASSKAA 165
Query: 178 LNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGII 225
+ R+++ DL I + PG + TD S E+
Sbjct: 166 ASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHT 213
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244 | Back alignment and structure |
|---|
Score = 86.9 bits (216), Expect = 8e-21
Identities = 39/218 (17%), Positives = 77/218 (35%), Gaps = 36/218 (16%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFA---TCRNKDKAVELLA-LAQQHSNLHV 57
+LITG +G+G + + P + R ++ + +
Sbjct: 3 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDT 62
Query: 58 IELDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLL---KPEQ---MT 110
I D++D + + + + +V+ G ++ LVNNAG+ R G L E
Sbjct: 63 ITADISDMADVRRL----TTHIVERYGHIDCLVNNAGV----GRFGALSDLTEEDFDYTM 114
Query: 111 DHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHP 170
+ N+ LT+ + L+++ S I ++S+ +
Sbjct: 115 N---TNLKGTFFLTQALFALMERQ---------HSGH--IFFITSVAATKAFRHSSI--- 157
Query: 171 YRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
Y SK ++ + + + T + PG V T M
Sbjct: 158 YCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPM 195
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291 | Back alignment and structure |
|---|
Score = 87.7 bits (218), Expect = 1e-20
Identities = 57/245 (23%), Positives = 85/245 (34%), Gaps = 55/245 (22%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
++++ITG N GLG + L G A + R+ K A + V ELD
Sbjct: 17 RTVVITGANSGLGAVTARELARRG----ATVIMAVRDTRKGEA--AARTMAGQVEVRELD 70
Query: 62 VTDFSKQQDVLFKDISDVVKD-QGLNVLVNNAGIAAKFTRLGLLKPEQMTD-----HFLV 115
+ D + G +VL+NNAGI A P +T
Sbjct: 71 LQDL--------SSVRRFADGVSGADVLINNAGIMAV--------PYALTVDGFESQIGT 114
Query: 116 NVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSI---MGSIE-DNTQGGFHPY 171
N LT +LP L R +V VSS+ G I ++ Y
Sbjct: 115 NHLGHFALTNLLLPRLT-------------DR--VVTVSSMAHWPGRINLEDLNWRSRRY 159
Query: 172 RC------SKAALNAATRSLS--IDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAG 223
SK A T L + G + A A HPG+ T++ G++ A +
Sbjct: 160 SPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRKLGDALMSA 219
Query: 224 IIQFI 228
+ +
Sbjct: 220 ATRVV 224
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255 | Back alignment and structure |
|---|
Score = 86.8 bits (216), Expect = 1e-20
Identities = 46/221 (20%), Positives = 84/221 (38%), Gaps = 37/221 (16%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIEL 60
K+ L+TG RGLG + L G A + E + L ++ + H +
Sbjct: 10 KTALVTGSARGLGFAYAEGLAAAG----ARVILNDIRATLLAESVDTLTRKGYDAHGVAF 65
Query: 61 DVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIA--AKFTRLGLLKPEQMTDHFL-VN 116
DVTD + S + + +++L+NNAGI L + + N
Sbjct: 66 DVTDELAIEAA----FSKLDAEGIHVDILINNAGIQYRKPMVEL----ELENWQKVIDTN 117
Query: 117 VTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFH--PYRCS 174
+T+ +++++ + + S I+N+ S+ PY +
Sbjct: 118 LTSAFLVSRSAAKRMIARN----------SGGKIINIGSLTSQ-----AARPTVAPYTAA 162
Query: 175 KAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPL 215
K + T S++ + I A+ PG++ TDM N L
Sbjct: 163 KGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDM---NTAL 200
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259 | Back alignment and structure |
|---|
Score = 86.4 bits (215), Expect = 1e-20
Identities = 52/227 (22%), Positives = 86/227 (37%), Gaps = 27/227 (11%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHI-FATCRNKDKAVELLALAQQH-SNLHVIE 59
++I++ G R +G G A++ + A +A ++ + I+
Sbjct: 9 RTIVVAGAGRDIGRACAIRFAQEG----ANVVLTYNGAAEGAATAVAEIEKLGRSALAIK 64
Query: 60 LDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVT 118
D+T+ ++ + IS G ++ LV+ AG + + VN+T
Sbjct: 65 ADLTNAAEVEAA----ISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLT 120
Query: 119 APLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAAL 178
+ + KT LP + K AIV SS G D G Y SK A+
Sbjct: 121 SLFLTAKTALPKMAKGG-------------AIVTFSSQAG--RDGGGPGALAYATSKGAV 165
Query: 179 NAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGII 225
TR L+ ++ G KI A+ PG + T + EV AG
Sbjct: 166 MTFTRGLAKEV-GPKIRVNAVCPGMISTTFHDTFTKPEVRERVAGAT 211
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255 | Back alignment and structure |
|---|
Score = 86.4 bits (215), Expect = 2e-20
Identities = 53/215 (24%), Positives = 91/215 (42%), Gaps = 28/215 (13%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFAT-CRNKDKAVELLALAQQH-SNLHVIE 59
K L+TG +RG+G + K L G A + K++A E + Q + + I
Sbjct: 8 KVALVTGASRGIGRAIAKRLANDG----ALVAIHYGNRKEEAEETVYEIQSNGGSAFSIG 63
Query: 60 LDVTDFSKQQDVLFKDISDVVKDQ----GLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLV 115
++ + L+ + + ++++ ++L+NNAGI + + V
Sbjct: 64 ANLESLH-GVEALYSSLDNELQNRTGSTKFDILINNAGIG-PGAFIEETTEQFFDRMVSV 121
Query: 116 NVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSK 175
N AP + + L L+ +SR I+N+SS I + F Y +K
Sbjct: 122 NAKAPFFIIQQALSRLRD-----------NSR--IINISSAATRI---SLPDFIAYSMTK 165
Query: 176 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGG 210
A+N T +L+ L I A+ PG+VKTDM
Sbjct: 166 GAINTMTFTLAKQLGARGITVNAILPGFVKTDMNA 200
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258 | Back alignment and structure |
|---|
Score = 86.1 bits (214), Expect = 2e-20
Identities = 46/210 (21%), Positives = 81/210 (38%), Gaps = 19/210 (9%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHI-FATCRNKDKAVELLALAQQH-SNLHVIE 59
K +LITG ++G+GL ++ G A + + E +A + +
Sbjct: 8 KRVLITGSSQGIGLATARLFARAG----AKVGLHGRKAPANIDETIASMRADGGDAAFFA 63
Query: 60 LDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVT 118
D+ Q + + + V G ++VL+NNAG L + N+
Sbjct: 64 ADLATSEACQQL----VDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIR 119
Query: 119 APLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAAL 178
+ +M TK LP L A++A+ +A+++ SI G G Y +KA L
Sbjct: 120 SVVMTTKFALPHLAAAAKASGQT------SAVISTGSIAGHTGGG--PGAGLYGAAKAFL 171
Query: 179 NAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
+ ++ D + + PG V T
Sbjct: 172 HNVHKNWVDFHTKDGVRFNIVSPGTVDTAF 201
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254 | Back alignment and structure |
|---|
Score = 85.6 bits (213), Expect = 3e-20
Identities = 52/224 (23%), Positives = 87/224 (38%), Gaps = 26/224 (11%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K+++ITG RGLG + V G A + ++ + LD
Sbjct: 6 KTVIITGGARGLGAEAARQAVAAG----ARVVLADVLDEEGAATAR--ELGDAARYQHLD 59
Query: 62 VTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAP 120
VT Q V ++ ++ G ++ LVNNAGI+ L E+ +N+T
Sbjct: 60 VTIEEDWQRV----VAYAREEFGSVDGLVNNAGIS-TGMFLETESVERFRKVVEINLTGV 114
Query: 121 LMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNA 180
+ KT++P +K A G +IVN+SS G + Y SK +
Sbjct: 115 FIGMKTVIPAMKDA---------GG--GSIVNISSAAGLM---GLALTSSYGASKWGVRG 160
Query: 181 ATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGI 224
++ +++L D+I ++HPG T M +
Sbjct: 161 LSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEGNYPNT 204
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280 | Back alignment and structure |
|---|
Score = 86.1 bits (214), Expect = 3e-20
Identities = 48/230 (20%), Positives = 82/230 (35%), Gaps = 25/230 (10%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIEL 60
K ++TG + G+G + G A + T RN + EL +A +
Sbjct: 9 KIAIVTGASSGIGRAAALLFAREG----AKVVVTARNGNALAELTDEIAGGGGEAAALAG 64
Query: 61 DVTDFSKQQDVLFKDISDVVKDQ--GLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVT 118
DV D + + + ++ + GL+ NNAG + L E + N+T
Sbjct: 65 DVGD---EALH--EALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLT 119
Query: 119 APLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAAL 178
+ + K +P + G ++ SS +G G PY SKA L
Sbjct: 120 SAFLAAKYQVPAIAAL---------GG--GSLTFTSSFVGHT--AGFAGVAPYAASKAGL 166
Query: 179 NAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFI 228
++L+++L I A+ PG T +N P +
Sbjct: 167 IGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLH 216
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202 | Back alignment and structure |
|---|
Score = 84.6 bits (210), Expect = 3e-20
Identities = 30/209 (14%), Positives = 66/209 (31%), Gaps = 48/209 (22%)
Query: 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIEL 60
IL+ G + LG + + L + A + R+ + +
Sbjct: 3 AMKILLIGASGTLGSAVKERL-----EKKAEVITAGRHSGD----------------VTV 41
Query: 61 DVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTA 119
D+T+ I + + G ++ +V+ G A F+ L L PE+ +
Sbjct: 42 DITNID--------SIKKMYEQVGKVDAIVSATGSA-TFSPLTELTPEKNAVTISSKLGG 92
Query: 120 PLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALN 179
+ L + L + + + IM ++ + A+
Sbjct: 93 QINLVLLGIDSLND-------------KGSFTLTTGIMM---EDPIVQGASAAMANGAVT 136
Query: 180 AATRSLSIDLKGDKIIATAMHPGWVKTDM 208
A +S +I++ I + P ++
Sbjct: 137 AFAKSAAIEM-PRGIRINTVSPNVLEESW 164
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264 | Back alignment and structure |
|---|
Score = 85.7 bits (213), Expect = 3e-20
Identities = 53/235 (22%), Positives = 96/235 (40%), Gaps = 35/235 (14%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K +++TG + G+G + + V G + + + + IE D
Sbjct: 9 KVVIVTGASMGIGRAIAERFVDEG----SKVIDLSIHDPGEAKYDH----------IECD 54
Query: 62 VTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAP 120
VT+ + + I + K+ G ++VLVNNAGI + ++ + + VN+
Sbjct: 55 VTNPDQVKAS----IDHIFKEYGSISVLVNNAGI-ESYGKIESMSMGEWRRIIDVNLFGY 109
Query: 121 LMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNA 180
+K +P + ++ +IVN+SS+ SI Y SK A+
Sbjct: 110 YYASKFAIPYMIRS---------RD--PSIVNISSVQASI---ITKNASAYVTSKHAVIG 155
Query: 181 ATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQSLGEAH 235
T+S+++D + A+ P + T + A LEVG+ I + I G H
Sbjct: 156 LTKSIALDY-APLLRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEH 209
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281 | Back alignment and structure |
|---|
Score = 85.8 bits (213), Expect = 4e-20
Identities = 48/210 (22%), Positives = 75/210 (35%), Gaps = 23/210 (10%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLAL--AQQHSNLHVIE 59
+ L+TG G+G G+ + L G + T R D + + + +
Sbjct: 34 RIALVTGGGTGVGRGIAQALSAEG----YSVVITGRRPDVLDAAAGEIGGRTGNIVRAVV 89
Query: 60 LDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVT 118
DV D Q LF V + L++LVNNAG L + EQ N+T
Sbjct: 90 CDVGD-PDQVAALFAA---VRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLT 145
Query: 119 APLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAAL 178
+ T+ ++K I+N SI PY +K A+
Sbjct: 146 GAFLCTQHAFRMMKAQ---------TPRGGRIINNGSISAQTPRPNSA---PYTATKHAI 193
Query: 179 NAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
T+S ++D + I + G TDM
Sbjct: 194 TGLTKSTALDGRMHDIACGQIDIGNAATDM 223
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236 | Back alignment and structure |
|---|
Score = 84.7 bits (210), Expect = 4e-20
Identities = 25/209 (11%), Positives = 63/209 (30%), Gaps = 32/209 (15%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
+++ G LG +++ G + + + Q + +++ +
Sbjct: 4 GKVIVYGGKGALGSAILEFFKKNG----YTVLNIDLSAN---------DQADSNILVDGN 50
Query: 62 VTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPL 121
++Q+ + + + ++ ++ + AG A + + +V +
Sbjct: 51 KNW-TEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSA 109
Query: 122 MLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNAA 181
+ K LK + + Y +KAA++
Sbjct: 110 IAAKLATTHLKPG-------------GLLQLTGAAAA---MGPTPSMIGYGMAKAAVHHL 153
Query: 182 TRSLSIDLKG--DKIIATAMHPGWVKTDM 208
T SL+ G D + P + T M
Sbjct: 154 TSSLAAKDSGLPDNSAVLTIMPVTLDTPM 182
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256 | Back alignment and structure |
|---|
Score = 85.3 bits (212), Expect = 5e-20
Identities = 54/225 (24%), Positives = 88/225 (39%), Gaps = 30/225 (13%)
Query: 5 LITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIELDVT 63
++TG G+G + G A + T + A + A + Q +E +VT
Sbjct: 16 IVTGAAAGIGRAIAGTFAKAG----ASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVT 71
Query: 64 DFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLL--KPEQMTDHFLVNVTAP 120
D ++ V I + G + VLVNNAG F +N+ +
Sbjct: 72 DEQHREAV----IKAALDQFGKITVLVNNAGG----GGPKPFDMPMSDFEWAFKLNLFSL 123
Query: 121 LMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNA 180
L++ P ++KA G I+N+SS+ G + Y SKAA+N
Sbjct: 124 FRLSQLAAPHMQKA---------GGGA--ILNISSMAGENTNVRMA---SYGSSKAAVNH 169
Query: 181 ATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGII 225
TR+++ D+ I A+ PG +KTD + E+ A
Sbjct: 170 LTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLTPEIERAMLKHT 214
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266 | Back alignment and structure |
|---|
Score = 85.3 bits (212), Expect = 5e-20
Identities = 50/213 (23%), Positives = 86/213 (40%), Gaps = 31/213 (14%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA--LAQQHSNLHVIE 59
K LITG +G+G + + G A + + R+ + Q +++H +
Sbjct: 21 KRALITGATKGIGADIARAFAAAG----ARLVLSGRDVSELDAARRALGEQFGTDVHTVA 76
Query: 60 LDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLL---KPEQMTDHFLV 115
+D+ + ++ + G L+VLVNNAGI + + P+ V
Sbjct: 77 IDLAEPDAPAEL----ARRAAEAFGGLDVLVNNAGI----SHPQPVVDTDPQLFDATIAV 128
Query: 116 NVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSK 175
N+ AP +L + + A E G+ I+ V+S + Y SK
Sbjct: 129 NLRAPALLASAVGKAMVAAGEG------GA----IITVASAAALA---PLPDHYAYCTSK 175
Query: 176 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
A L AT+ L+ +L I A ++ P V T+M
Sbjct: 176 AGLVMATKVLARELGPHGIRANSVCPTVVLTEM 208
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301 | Back alignment and structure |
|---|
Score = 85.9 bits (213), Expect = 6e-20
Identities = 34/209 (16%), Positives = 76/209 (36%), Gaps = 24/209 (11%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIEL 60
++ ++TG G+GL G A + + ++ + + L Q + H +
Sbjct: 32 RAAVVTGGASGIGLATATEFARRG----ARLVLSDVDQPALEQAVNGLRGQGFDAHGVVC 87
Query: 61 DVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTA 119
DV + + + + G ++V+ +NAGI L + + +++
Sbjct: 88 DVRHLDEMVRL----ADEAFRLLGGVDVVFSNAGIVV-AGPLAQMNHDDWRWVIDIDLWG 142
Query: 120 PLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALN 179
+ + LP L + I +S G + G Y +K +
Sbjct: 143 SIHAVEAFLPRLLEQGTG----------GHIAFTASFAGLV---PNAGLGTYGVAKYGVV 189
Query: 180 AATRSLSIDLKGDKIIATAMHPGWVKTDM 208
+L+ ++K + I + + P V+T +
Sbjct: 190 GLAETLAREVKPNGIGVSVLCPMVVETKL 218
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262 | Back alignment and structure |
|---|
Score = 84.9 bits (211), Expect = 6e-20
Identities = 53/213 (24%), Positives = 89/213 (41%), Gaps = 31/213 (14%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA--LAQQHSNLHVIE 59
+S+++TG +G+G G+ V G A++ R+ +A + ++
Sbjct: 11 RSVVVTGGTKGIGRGIATVFARAG----ANVAVAGRSTADIDACVADLDQLGSGKVIGVQ 66
Query: 60 LDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLL---KPEQMTDHFLV 115
DV+D ++ + V++ G ++V+ NAG+ L PEQ+ F V
Sbjct: 67 TDVSDRAQCDAL----AGRAVEEFGGIDVVCANAGV----FPDAPLATMTPEQLNGIFAV 118
Query: 116 NVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSK 175
NV + L L + GS R +V SSI G I G+ Y +K
Sbjct: 119 NVNGTFYAVQACLDALIAS---------GSGR--VVLTSSITGPITGYP--GWSHYGATK 165
Query: 176 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
AA R+ +I+L KI A+ PG + T+
Sbjct: 166 AAQLGFMRTAAIELAPHKITVNAIMPGNIMTEG 198
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269 | Back alignment and structure |
|---|
Score = 84.5 bits (210), Expect = 8e-20
Identities = 58/235 (24%), Positives = 100/235 (42%), Gaps = 34/235 (14%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K ++TG + G+GL ++ LV G A + + ++ V + ++D
Sbjct: 15 KVAIVTGGSSGIGLAVVDALVRYG----AKVVSVSLDEKSDVNVSDH---------FKID 61
Query: 62 VTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAP 120
VT+ + ++ + K G +++LVNNAGI +++ L L E VNV
Sbjct: 62 VTNEEEVKEA----VEKTTKKYGRIDILVNNAGI-EQYSPLHLTPTEIWRRIIDVNVNGS 116
Query: 121 LMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNA 180
++ K +P++ +I+N++S+ Y SK AL
Sbjct: 117 YLMAKYTIPVMLAI-----------GHGSIINIASVQSYA---ATKNAAAYVTSKHALLG 162
Query: 181 ATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQSLGEAH 235
TRS++ID KI A+ PG + T M A +EVG + + I+ G H
Sbjct: 163 LTRSVAIDY-APKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQH 216
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267 | Back alignment and structure |
|---|
Score = 84.1 bits (209), Expect = 1e-19
Identities = 51/227 (22%), Positives = 81/227 (35%), Gaps = 28/227 (12%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATC-RNKDKAVELLA-LAQQHSNLHVIE 59
K ++TG +RG+G + L G + A E+ + +
Sbjct: 28 KVAIVTGASRGIGAAIAARLASDG----FTVVINYAGKAAAAEEVAGKIEAAGGKALTAQ 83
Query: 60 LDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVT 118
DV+D + LF + G ++VLVNNAGI T + VN+
Sbjct: 84 ADVSDPA-AVRRLFAT---AEEAFGGVDVLVNNAGIM-PLTTIAETGDAVFDRVIAVNLK 138
Query: 119 APLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAAL 178
+ L+ G I+N+S+ + + G Y +KA +
Sbjct: 139 GTFNTLREAAQRLRVG---------GR----IINMSTSQVGLLHPSYG---IYAAAKAGV 182
Query: 179 NAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGII 225
A T LS +L+G I A+ PG TD+ EV A +
Sbjct: 183 EAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGKSDEVRDRFAKLA 229
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265 | Back alignment and structure |
|---|
Score = 84.1 bits (209), Expect = 1e-19
Identities = 39/213 (18%), Positives = 80/213 (37%), Gaps = 37/213 (17%)
Query: 5 LITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKA---VELLALAQQHSNLHVIELD 61
++TG + G+GL +++L+ G A + R+ ++ L + L D
Sbjct: 12 VVTGGSSGIGLATVELLLEAG----AAVAFCARDGERLRAAESALRQRFPGARLFASVCD 67
Query: 62 VTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLL---KPEQMTDHFLVNV 117
V D + + + G ++LVNNAG R+ E ++ +
Sbjct: 68 VLDALQVRAF----AEACERTLGCASILVNNAGQ----GRVSTFAETTDEAWSEELQLKF 119
Query: 118 TAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFH--PYRCSK 175
+ + + LP L+ + AAIV V+S++ +Q H ++
Sbjct: 120 FSVIHPVRAFLPQLESRA-----------DAAIVCVNSLLA-----SQPEPHMVATSAAR 163
Query: 176 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
A + RS++ + + + G V++
Sbjct: 164 AGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQ 196
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273 | Back alignment and structure |
|---|
Score = 84.1 bits (209), Expect = 1e-19
Identities = 50/219 (22%), Positives = 86/219 (39%), Gaps = 36/219 (16%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
++ ++TG G+G + G AH+ A R +A + + D
Sbjct: 32 RTAVVTGAGSGIGRAIAHGYARAG----AHVLAWGRTDGVKEVADEIADGGGSAEAVVAD 87
Query: 62 VTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLK--PEQMTDHFL-VNVT 118
+ D +V ++ + ++VLVNNAGI + L VN+
Sbjct: 88 LADLEGAANV----AEELAATRRVDVLVNNAGI----IARAPAEEVSLGRWREVLTVNLD 139
Query: 119 APLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFH--PYRCSKA 176
A +L+++ + GS R IV ++S++ QGG + Y SK
Sbjct: 140 AAWVLSRSFGTAMLAH---------GSGR--IVTIASMLS-----FQGGRNVAAYAASKH 183
Query: 177 ALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPL 215
A+ TR+L+ + G + A+ PG+V T A L
Sbjct: 184 AVVGLTRALASEWAGRGVGVNALAPGYVVTAN---TAAL 219
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254 | Back alignment and structure |
|---|
Score = 83.4 bits (207), Expect = 2e-19
Identities = 36/209 (17%), Positives = 67/209 (32%), Gaps = 28/209 (13%)
Query: 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIEL 60
M + ++T G+G L G + + + EL A A+ +L
Sbjct: 1 MSTAIVTNVKHFGGMGSALRLSEAG----HTVACHDESFKQKDELEAFAE-----TYPQL 51
Query: 61 DVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTA 119
+ ++ I V G ++VLV+N A +F + E
Sbjct: 52 KPMSEQEPAEL----IEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIR 107
Query: 120 PLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALN 179
P L + +KK S I+ ++S Y ++A
Sbjct: 108 PFALVNAVASQMKKR---------KSGH--IIFITSATPFGPWKELS---TYTSARAGAC 153
Query: 180 AATRSLSIDLKGDKIIATAMHPGWVKTDM 208
+LS +L I A+ P ++ ++
Sbjct: 154 TLANALSKELGEYNIPVFAIGPNYLHSED 182
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253 | Back alignment and structure |
|---|
Score = 83.3 bits (207), Expect = 2e-19
Identities = 54/235 (22%), Positives = 99/235 (42%), Gaps = 31/235 (13%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K L+TG G+GL ++K+L+G G A + + N+ +L A + + D
Sbjct: 7 KVALVTGGASGVGLEVVKLLLGEG----AKVAFSDINEAAGQQLAA--ELGERSMFVRHD 60
Query: 62 VTDFSKQQDVLFKDISDVVKDQ--GLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTA 119
V+ + D + V+ + LNVLVNNAGI + + E + +N +
Sbjct: 61 VSS---EADW--TLVMAAVQRRLGTLNVLVNNAGILL-PGDMETGRLEDFSRLLKINTES 114
Query: 120 PLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALN 179
+ + + +K+ GS I+N++S+ + + Y SKAA++
Sbjct: 115 VFIGCQQGIAAMKETG--------GS----IINMASVSSWL---PIEQYAGYSASKAAVS 159
Query: 180 AATRSLSIDL--KGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQSLG 232
A TR+ ++ +G I ++HP + T M ++ P V + G
Sbjct: 160 ALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAG 214
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259 | Back alignment and structure |
|---|
Score = 83.3 bits (207), Expect = 2e-19
Identities = 51/210 (24%), Positives = 85/210 (40%), Gaps = 29/210 (13%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
KS LITG RG+G + V G A + + ++A + A A+ + +++D
Sbjct: 9 KSALITGSARGIGRAFAEAYVREG----ATVAIADIDIERARQ--AAAEIGPAAYAVQMD 62
Query: 62 VTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAP 120
VT I+ V+ G L++LVNNA + + + E F +NV
Sbjct: 63 VTRQDSIDAA----IAATVEHAGGLDILVNNAALF-DLAPIVEITRESYEKLFAINVAGT 117
Query: 121 LMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQG--GFHPYRCSKAAL 178
L + + G I+N++S G +G Y +KAA+
Sbjct: 118 LFTLQAAARQMIAQGRG------GK----IINMASQAG-----RRGEALVAIYCATKAAV 162
Query: 179 NAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
+ T+S +DL +I A+ PG V +
Sbjct: 163 ISLTQSAGLDLIKHRINVNAIAPGVVDGEH 192
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260 | Back alignment and structure |
|---|
Score = 83.3 bits (207), Expect = 2e-19
Identities = 53/209 (25%), Positives = 86/209 (41%), Gaps = 28/209 (13%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K L++G RG+G ++ +V G A + ++ + A + + LD
Sbjct: 8 KVALVSGGARGMGASHVRAMVAEG----AKVVFGDILDEEGKAMAA--ELADAARYVHLD 61
Query: 62 VTDFSKQQDVLFKDISDVVKDQ--GLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTA 119
VT K D GL+VLVNNAGI + + VN+T
Sbjct: 62 VTQ---PAQW--KAAVDTAVTAFGGLHVLVNNAGIL-NIGTIEDYALTEWQRILDVNLTG 115
Query: 120 PLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALN 179
+ + ++ +K+A R +I+N+SSI G H Y +K A+
Sbjct: 116 VFLGIRAVVKPMKEAG-----------RGSIINISSIEGLA---GTVACHGYTATKFAVR 161
Query: 180 AATRSLSIDLKGDKIIATAMHPGWVKTDM 208
T+S +++L I ++HPG VKT M
Sbjct: 162 GLTKSTALELGPSGIRVNSIHPGLVKTPM 190
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247 | Back alignment and structure |
|---|
Score = 83.0 bits (206), Expect = 3e-19
Identities = 53/215 (24%), Positives = 88/215 (40%), Gaps = 32/215 (14%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIEL 60
K LITG + G+G + L G A + R +K L L + +HV+EL
Sbjct: 8 KVALITGASSGIGEATARALAAEG----AAVAIAARRVEKLRALGDELTAAGAKVHVLEL 63
Query: 61 DVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPE---QMTDHFLVN 116
DV D ++ V+ G L++LVNNAGI + +M D N
Sbjct: 64 DVADRQGVDAA----VASTVEALGGLDILVNNAGIML-LGPVEDADTTDWTRMID---TN 115
Query: 117 VTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKA 176
+ + +T+ LP L + S+ +V +SSI G + Y+ +K
Sbjct: 116 LLGLMYMTRAALPHLLR------------SKGTVVQMSSIAGRV---NVRNAAVYQATKF 160
Query: 177 ALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS 211
+NA + +L ++ + + PG T++ G
Sbjct: 161 GVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGH 195
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260 | Back alignment and structure |
|---|
Score = 83.1 bits (206), Expect = 3e-19
Identities = 56/254 (22%), Positives = 93/254 (36%), Gaps = 39/254 (15%)
Query: 5 LITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQH-SNLHVIELDVT 63
++TG +RG+G G+ L G A ++ T R+ D + AQ + D +
Sbjct: 9 VVTGASRGIGRGIALQLCKAG----ATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSS 64
Query: 64 DFSKQQDVLFKDISDVVKDQ--GLNVLVNNAGIAAK---FTRLGLL--KPEQMTDHFL-V 115
S + LF+ + ++Q L+VLVNNA + TR P M D V
Sbjct: 65 QES-EVRSLFEQV---DREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNV 120
Query: 116 NVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFH--PYRC 173
+ + L+ A G IV +SS PY
Sbjct: 121 GLRGHYFCSVYGARLMVPA---------GQGL--IVVISSPGS------LQYMFNVPYGV 163
Query: 174 SKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQSLGE 233
KAA + + +L+ + ++ PG V+T++ + E + QF +
Sbjct: 164 GKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAFSS 223
Query: 234 AHNGGFFEYTGKAI 247
A E +GK +
Sbjct: 224 AETT---ELSGKCV 234
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252 | Back alignment and structure |
|---|
Score = 82.7 bits (205), Expect = 4e-19
Identities = 33/226 (14%), Positives = 64/226 (28%), Gaps = 27/226 (11%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIEL 60
++ + G +G + K G +FA RN +K L+A + + L
Sbjct: 8 ATVAVIGAGDYIGAEIAKKFAAEG----FTVFAGRRNGEKLAPLVAEIEAAGGRIVARSL 63
Query: 61 DVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTA 119
D + + +V + L V + N G + + + A
Sbjct: 64 DARN---EDEV--TAFLNAADAHAPLEVTIFNVGAN-VNFPILETTDRVFRKVWEMACWA 117
Query: 120 PLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALN 179
+ + L+ + I + GF + +K L
Sbjct: 118 GFVSGRESARLMLAHG-----------QGKIFFTGATASLR---GGSGFAAFASAKFGLR 163
Query: 180 AATRSLSIDLKGDKI-IATAMHPGWVKTDMGGSNAPLEVGAATAGI 224
A +S++ +L I +A + V T G
Sbjct: 164 AVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERREQMFGKDALAN 209
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262 | Back alignment and structure |
|---|
Score = 82.6 bits (205), Expect = 4e-19
Identities = 46/209 (22%), Positives = 73/209 (34%), Gaps = 24/209 (11%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIEL 60
K L+TG +GL L G I N++ + A + ++
Sbjct: 8 KVCLVTGAGGNIGLATALRLAEEG----TAIALLDMNREALEKAEASVREKGVEARSYVC 63
Query: 61 DVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTA 119
DVT + VV+D G ++ L NNAG F + + +NVT
Sbjct: 64 DVTSEEAVIGT----VDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTG 119
Query: 120 PLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALN 179
+ K + + R IVN +S+ G Y SK A+
Sbjct: 120 AFHVLKAVSRQMITQ---------NYGR--IVNTASMAGVKGPPNMA---AYGTSKGAII 165
Query: 180 AATRSLSIDLKGDKIIATAMHPGWVKTDM 208
A T + ++DL I A+ PG++
Sbjct: 166 ALTETAALDLAPYNIRVNAISPGYMGPGF 194
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254 | Back alignment and structure |
|---|
Score = 82.2 bits (204), Expect = 5e-19
Identities = 45/207 (21%), Positives = 73/207 (35%), Gaps = 22/207 (10%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
+TG G+GL + + G A + R I D
Sbjct: 12 ACAAVTGAGSGIGLEICRAFAASG----ARLILIDREAAALDRAAQELGAA-VAARIVAD 66
Query: 62 VTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPL 121
VTD ++ +++LVN+AGIA + VNV
Sbjct: 67 VTDAEAMTAA----AAEAEAVAPVSILVNSAGIA-RLHDALETDDATWRQVMAVNVDGMF 121
Query: 122 MLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNAA 181
++ + G+ IVN+ S+ G+I N Y SK A++
Sbjct: 122 WASRAFGRAMVAR---------GAGA--IVNLGSMSGTI-VNRPQFASSYMASKGAVHQL 169
Query: 182 TRSLSIDLKGDKIIATAMHPGWVKTDM 208
TR+L+ + G + A+ PG+V T+M
Sbjct: 170 TRALAAEWAGRGVRVNALAPGYVATEM 196
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283 | Back alignment and structure |
|---|
Score = 82.6 bits (205), Expect = 5e-19
Identities = 54/209 (25%), Positives = 88/209 (42%), Gaps = 22/209 (10%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIEL 60
LITG G+G L G + A R + + E+ + +E
Sbjct: 29 PVALITGAGSGIGRATALALAADG----VTVGALGRTRTEVEEVADEIVGAGGQAIALEA 84
Query: 61 DVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTA 119
DV+D + ++ + D+V G L+++V NAGI + + LKP + + VN+
Sbjct: 85 DVSDELQMRNA----VRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRG 140
Query: 120 PLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALN 179
+ +P LK+ G IV VSSI G T G Y +KAA
Sbjct: 141 TFLTLHLTVPYLKQR---------GGGA--IVVVSSING-TRTFTTPGATAYTATKAAQV 188
Query: 180 AATRSLSIDLKGDKIIATAMHPGWVKTDM 208
A + L+++L I A+ PG ++T++
Sbjct: 189 AIVQQLALELGKHHIRVNAVCPGAIETNI 217
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254 | Back alignment and structure |
|---|
Score = 82.2 bits (204), Expect = 6e-19
Identities = 47/229 (20%), Positives = 88/229 (38%), Gaps = 24/229 (10%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIEL 60
K +++TG G+G + K + + A +D+ +++ L + ++
Sbjct: 8 KVVIVTGAGSGIGRAIAKKFALND----SIVVAVELLEDRLNQIVQELRGMGKEVLGVKA 63
Query: 61 DVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTA 119
DV+ ++ + + ++VL NNAGI T + + E VN+ +
Sbjct: 64 DVSKKKDVEEF----VRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYS 119
Query: 120 PLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALN 179
++ ++P++ K G IVN +SI G PY +K L
Sbjct: 120 AFYSSRAVIPIMLKQ---------GK--GVIVNTASIAGIR---GGFAGAPYTVAKHGLI 165
Query: 180 AATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFI 228
TRS++ I A A+ PG VKT++G ++
Sbjct: 166 GLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMS 214
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266 | Back alignment and structure |
|---|
Score = 82.2 bits (204), Expect = 6e-19
Identities = 50/211 (23%), Positives = 76/211 (36%), Gaps = 40/211 (18%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K L+TG G+G ++ L G A + R L L D
Sbjct: 29 KVALVTGAAGGIGGAVVTALRAAG----ARVAVADRAVAGIAADLHLP----------GD 74
Query: 62 VTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLL---KPEQMTDHFLVNV 117
+ + + + V G L+++VNNAG+ G + + VNV
Sbjct: 75 LREAAYADGL----PGAVAAGLGRLDIVVNNAGV----ISRGRITETTDADWSLSLGVNV 126
Query: 118 TAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAA 177
AP + + +PL+ A AIVNV+S G Y +KAA
Sbjct: 127 EAPFRICRAAIPLMAAAG-----------GGAIVNVASCWGLRPGPGHA---LYCLTKAA 172
Query: 178 LNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
L + T+ + +D I A+ P V T M
Sbjct: 173 LASLTQCMGMDHAPQGIRINAVCPNEVNTPM 203
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258 | Back alignment and structure |
|---|
Score = 81.8 bits (203), Expect = 7e-19
Identities = 48/214 (22%), Positives = 80/214 (37%), Gaps = 32/214 (14%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFAT--CRNKDKAVELLALAQQH-SNLHVI 58
K ++TG +G+G G+ + L G I + +++A E + L + +
Sbjct: 3 KVAMVTGGAQGIGRGISEKLAADG----FDIAVADLPQQEEQAAETIKLIEAADQKAVFV 58
Query: 59 ELDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLL---KPEQMTDHFL 114
LDVTD + I + + G +VLVNNAGI ++ L E + +
Sbjct: 59 GLDVTDKANFDSA----IDEAAEKLGGFDVLVNNAGI----AQIKPLLEVTEEDLKQIYS 110
Query: 115 VNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCS 174
VNV + + + G I+N +SI Y +
Sbjct: 111 VNVFSVFFGIQAASRKFDELGVK------GK----IINAASIAAIQGFPILS---AYSTT 157
Query: 175 KAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
K A+ T++ + +L A PG V T M
Sbjct: 158 KFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGM 191
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276 | Back alignment and structure |
|---|
Score = 81.8 bits (203), Expect = 9e-19
Identities = 42/212 (19%), Positives = 83/212 (39%), Gaps = 28/212 (13%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIEL 60
K LITG + G+G + G A + R+ D + +A I
Sbjct: 33 KRALITGASTGIGKKVALAYAEAG----AQVAVAARHSDALQVVADEIAGVGGKALPIRC 88
Query: 61 DVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLL---KPEQMTDHFLVN 116
DVT + + + + + + G +++ V NAGI + + E+ N
Sbjct: 89 DVTQPDQVRGM----LDQMTGELGGIDIAVCNAGI----VSVQAMLDMPLEEFQRIQDTN 140
Query: 117 VTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKA 176
VT + + + + I+ +S+ G I N Y SKA
Sbjct: 141 VTGVFLTAQAAARAMVDQGLGGT----------IITTASMSGHI-INIPQQVSHYCTSKA 189
Query: 177 ALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
A+ T++++++L +I ++ PG+++T++
Sbjct: 190 AVVHLTKAMAVELAPHQIRVNSVSPGYIRTEL 221
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260 | Back alignment and structure |
|---|
Score = 81.5 bits (202), Expect = 1e-18
Identities = 42/211 (19%), Positives = 81/211 (38%), Gaps = 36/211 (17%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K ++ITG ++G+G G+++ + AT R+ + + + D
Sbjct: 29 KVVVITGASQGIGAGLVRAYRDRN----YRVVATSRSIKPSADPDIHT--------VAGD 76
Query: 62 VTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLL---KPEQMTDHFLVNV 117
++ + + + ++ G ++ LVNNAG+ E + VNV
Sbjct: 77 ISKPETADRI----VREGIERFGRIDSLVNNAGV----FLAKPFVEMTQEDYDHNLGVNV 128
Query: 118 TAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAA 177
+T+ + K GS IV++++ + +K
Sbjct: 129 AGFFHITQRAAAEMLKQ---------GSGH--IVSITTSLVDQPMVGMPSAL-ASLTKGG 176
Query: 178 LNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
LNA TRSL+++ + A+ PG +KT M
Sbjct: 177 LNAVTRSLAMEFSRSGVRVNAVSPGVIKTPM 207
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235 | Back alignment and structure |
|---|
Score = 81.0 bits (201), Expect = 1e-18
Identities = 51/228 (22%), Positives = 83/228 (36%), Gaps = 39/228 (17%)
Query: 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQ-----HSNL 55
MK +ITG +RG+G + + L G + R+ D+ L +A + +
Sbjct: 2 MKVAVITGASRGIGEAIARALARDG----YALALGARSVDR---LEKIAHELMQEQGVEV 54
Query: 56 HVIELDVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPE---QMTDH 112
LDV+ + K + + + ++V+V NAG+ F RL L E +M +
Sbjct: 55 FYHHLDVSKAE-SVEEFSKKVLE--RFGDVDVVVANAGL-GYFKRLEELSEEEFHEMIE- 109
Query: 113 FLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYR 172
VN+ K L LK+ + A+V S + Y
Sbjct: 110 --VNLLGVWRTLKAFLDSLKR-----------TGGLALVTTSDVSA----RLIPYGGGYV 152
Query: 173 CSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAA 220
+K A A R+ I+ + + PG V T GGS
Sbjct: 153 STKWAARALVRTFQIE--NPDVRFFELRPGAVDTYFGGSKPGKPKEKG 198
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274 | Back alignment and structure |
|---|
Score = 81.9 bits (203), Expect = 1e-18
Identities = 49/225 (21%), Positives = 84/225 (37%), Gaps = 27/225 (12%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFAT-CRNKDKAVELLALAQQH-SNLHVIE 59
K L TG RG+G G+ L G A + + A E++A ++ + I+
Sbjct: 22 KVALTTGAGRGIGRGIAIELGRRG----ASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQ 77
Query: 60 LDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVT 118
D++ S + LF V G L+ +++N+G+ + + E F +N
Sbjct: 78 ADISKPS-EVVALFDK---AVSHFGGLDFVMSNSGME-VWCDELEVTQELFDKVFNLNTR 132
Query: 119 APLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAAL 178
+ + L ++ G I+ SSI + Y SKAA+
Sbjct: 133 GQFFVAQQGLKHCRRG---------GR----IILTSSIAAVMTGI--PNHALYAGSKAAV 177
Query: 179 NAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAG 223
R+ ++D + + PG VKTDM N+ G
Sbjct: 178 EGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKG 222
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267 | Back alignment and structure |
|---|
Score = 81.8 bits (203), Expect = 1e-18
Identities = 43/223 (19%), Positives = 84/223 (37%), Gaps = 40/223 (17%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA--LAQQHSNLHVIE 59
+ L+TG +RGLG G+ + L G + RN ++A E +
Sbjct: 22 RVALVTGGSRGLGFGIAQGLAEAG----CSVVVASRNLEEASEAAQKLTEKYGVETMAFR 77
Query: 60 LDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLL---KPEQMTDHFLV 115
DV+++ + + + + V + G L+ +VN AGI R ++ V
Sbjct: 78 CDVSNYEEVKKL----LEAVKEKFGKLDTVVNAAGI----NRRHPAEEFPLDEFRQVIEV 129
Query: 116 NVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFH---PYR 172
N+ + + LL+++ + I+N+ S+ + Y
Sbjct: 130 NLFGTYYVCREAFSLLRES---------DNPS--IINIGSLTVE-----EVTMPNISAYA 173
Query: 173 CSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPL 215
SK + + T++L+ + I + PGW +T M +
Sbjct: 174 ASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKM---TEAV 213
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265 | Back alignment and structure |
|---|
Score = 81.5 bits (202), Expect = 1e-18
Identities = 50/218 (22%), Positives = 85/218 (38%), Gaps = 34/218 (15%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA--LAQQHSNLHVIE 59
K+I++TG NRG+GL + + G A++ R+ AVE+ + +
Sbjct: 15 KTIIVTGGNRGIGLAFTRAVAAAG----ANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQ 70
Query: 60 LDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLL---KPEQMTDHFLV 115
DV++ I + D G ++ L+ NAG+ + + E + V
Sbjct: 71 CDVSNTDIVTKT----IQQIDADLGPISGLIANAGV----SVVKPATELTHEDFAFVYDV 122
Query: 116 NVTAPLMLTKTML-PLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHP---- 170
NV + + L+K + GS IV SS+ I + +
Sbjct: 123 NVFGVFNTCRAVAKLWLQKQQK-------GS----IVVTSSMSSQIINQSSLNGSLTQVF 171
Query: 171 YRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
Y SKAA + + L+ + I A+ PG+V TD
Sbjct: 172 YNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQ 209
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279 | Back alignment and structure |
|---|
Score = 81.8 bits (203), Expect = 1e-18
Identities = 41/210 (19%), Positives = 79/210 (37%), Gaps = 24/210 (11%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQH-SNLHVIEL 60
K +TG + G+G + + G A + + + L + + + +
Sbjct: 35 KVASVTGSSGGIGWAVAEAYAQAG----ADVAIWYNSHPADEKAEHLQKTYGVHSKAYKC 90
Query: 61 DVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFL-VNVT 118
+++D ++ IS KD G ++V V NAG+ + + + V++
Sbjct: 91 NISDPKSVEET----ISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLN 146
Query: 119 APLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAAL 178
+ + + KK G ++ SSI G I N PY +KAA
Sbjct: 147 GVYYCSHNIGKIFKKN---------GKGS--LIITSSISGKIV-NIPQLQAPYNTAKAAC 194
Query: 179 NAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
+SL+I+ + PG++ TD+
Sbjct: 195 THLAKSLAIEW-APFARVNTISPGYIDTDI 223
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256 | Back alignment and structure |
|---|
Score = 81.0 bits (201), Expect = 1e-18
Identities = 50/209 (23%), Positives = 83/209 (39%), Gaps = 24/209 (11%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIEL 60
K L+TG +G+G + LV G + N A + + + Q + +++
Sbjct: 3 KVALVTGAGQGIGKAIALRLVKDG----FAVAIADYNDATAKAVASEINQAGGHAVAVKV 58
Query: 61 DVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTA 119
DV+D + + K G +V+VNNAG+A T + + PE + + +NV
Sbjct: 59 DVSDRDQVFAA----VEQARKTLGGFDVIVNNAGVA-PSTPIESITPEIVDKVYNINVKG 113
Query: 120 PLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALN 179
+ + + KK G I+N S G + + Y SK A+
Sbjct: 114 VIWGIQAAVEAFKKEGHG------GK----IINACSQAGHVGNPELA---VYSSSKFAVR 160
Query: 180 AATRSLSIDLKGDKIIATAMHPGWVKTDM 208
T++ + DL I PG VKT M
Sbjct: 161 GLTQTAARDLAPLGITVNGYCPGIVKTPM 189
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244 | Back alignment and structure |
|---|
Score = 80.6 bits (200), Expect = 2e-18
Identities = 34/213 (15%), Positives = 65/213 (30%), Gaps = 34/213 (15%)
Query: 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIEL 60
M L+T G ++ L G + + A E E
Sbjct: 1 MVIALVTHARHFAGPAAVEALTQDG----YTVVCHDASFADAAERQRFE--------SEN 48
Query: 61 DVTDFSKQQDV--LFKDISDVVKDQG-LNVLVNNAGIA--AKFTRLGLLKPEQMTDHFLV 115
T +Q L ++ ++ +V+N I L + F
Sbjct: 49 PGTIALAEQKPERLVDA---TLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEA 105
Query: 116 NVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSK 175
P++L ++ + L+ A G + ++ ++S +G Y ++
Sbjct: 106 LSIFPILLLQSAIAPLRAA---------GGAS--VIFITSSVGKKPLAYNP---LYGPAR 151
Query: 176 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
AA A S + L D I+ A+ P +
Sbjct: 152 AATVALVESAAKTLSRDGILLYAIGPNFFNNPT 184
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266 | Back alignment and structure |
|---|
Score = 80.7 bits (200), Expect = 2e-18
Identities = 47/214 (21%), Positives = 85/214 (39%), Gaps = 35/214 (16%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K ++ITG + G+G + + G + R ++ L AL N ++D
Sbjct: 17 KLVVITGASSGIGEAIARRFSEEG----HPLLLLARRVER---LKALNLP--NTLCAQVD 67
Query: 62 VTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPE---QMTDHFLVNV 117
VTD + I+ K G + +VNNAG+ ++ + +M D VNV
Sbjct: 68 VTD----KYTFDTAITRAEKIYGPADAIVNNAGMM-LLGQIDTQEANEWQRMFD---VNV 119
Query: 118 TAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAA 177
L + +L +K + I+N+SSI G T Y +K A
Sbjct: 120 LGLLNGMQAVLAPMKA-----------RNCGTIINISSIAGKK---TFPDHAAYCGTKFA 165
Query: 178 LNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS 211
++A + ++ ++ + + P VKT++
Sbjct: 166 VHAISENVREEVAASNVRVMTIAPSAVKTELLSH 199
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258 | Back alignment and structure |
|---|
Score = 80.6 bits (200), Expect = 2e-18
Identities = 51/213 (23%), Positives = 85/213 (39%), Gaps = 32/213 (15%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHI-FATCRNKDKAVELLA-LAQQHSNLHVIE 59
K L+TG +RG+G L G +I R+K A+E + + + V++
Sbjct: 5 KCALVTGSSRGVGKAAAIRLAENG----YNIVINYARSKKAALETAEEIEKLGVKVLVVK 60
Query: 60 LDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLL---KPEQMTDHFLV 115
+V +K +++ + + G L+V VNNA L + + +
Sbjct: 61 ANVGQPAKIKEM----FQQIDETFGRLDVFVNNAAS----GVLRPVMELEETHWDWTMNI 112
Query: 116 NVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSK 175
N A L + L++K G IV++SS+ SK
Sbjct: 113 NAKALLFCAQEAAKLMEKN---------GGGH--IVSISSLGSIRYLENYT---TVGVSK 158
Query: 176 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
AAL A TR L+++L +II A+ G + TD
Sbjct: 159 AALEALTRYLAVELSPKQIIVNAVSGGAIDTDA 191
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263 | Back alignment and structure |
|---|
Score = 80.3 bits (199), Expect = 3e-18
Identities = 45/212 (21%), Positives = 81/212 (38%), Gaps = 30/212 (14%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA--LAQQHSNLHVIE 59
K +ITG + G+GL + + G AHI R D+ E + + +
Sbjct: 8 KVAVITGSSSGIGLAIAEGFAKEG----AHIVLVARQVDRLHEAARSLKEKFGVRVLEVA 63
Query: 60 LDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGI--AAKFTRLGLLKPEQMTDHFLVN 116
+DV V + V G ++LVNNAG E+ ++ +
Sbjct: 64 VDVATPEGVDAV----VESVRSSFGGADILVNNAGTGSNETIMEA---ADEKWQFYWELL 116
Query: 117 VTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKA 176
V A + L + ++P ++ G I++ +SI Y +KA
Sbjct: 117 VMAAVRLARGLVPGMRAR---------GGGA--IIHNASICAV---QPLWYEPIYNVTKA 162
Query: 177 ALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
AL +++L+ ++ D I ++PG + T
Sbjct: 163 ALMMFSKTLATEVIKDNIRVNCINPGLILTPD 194
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280 | Back alignment and structure |
|---|
Score = 80.3 bits (199), Expect = 4e-18
Identities = 53/212 (25%), Positives = 90/212 (42%), Gaps = 25/212 (11%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHI-FATCRNKDKAVELLALAQQH-SNLHVIE 59
++TG RG+GLG+ + L G I + + ++A + + +
Sbjct: 30 PVAIVTGGRRGIGLGIARALAASG----FDIAITGIGDAEGVAPVIAELSGLGARVIFLR 85
Query: 60 LDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLL--KPEQMTDHFLVN 116
D+ D S Q + VV + G ++ LVNNAGIA R L KPE VN
Sbjct: 86 ADLADLSSHQAT----VDAVVAEFGRIDCLVNNAGIA-SIVRDDFLDLKPENFDTIVGVN 140
Query: 117 VTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKA 176
+ + T+ +L + + S S I+N++S+ + + Y SKA
Sbjct: 141 LRGTVFFTQAVLKAMLASDARAS----RS----IINITSVSAVMTSPERL---DYCMSKA 189
Query: 177 ALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
L A ++ L++ L I + PG +++DM
Sbjct: 190 GLAAFSQGLALRLAETGIAVFEVRPGIIRSDM 221
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253 | Back alignment and structure |
|---|
Score = 79.5 bits (197), Expect = 4e-18
Identities = 50/229 (21%), Positives = 84/229 (36%), Gaps = 31/229 (13%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIEL 60
K ++TG G+G + L G A + N + A + + + +
Sbjct: 10 KVGIVTGSGGGIGQAYAEALAREG----AAVVVADINAEAAEAVAKQIVADGGTAISVAV 65
Query: 61 DVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLL---KPEQMTDHFLVN 116
DV+D + + + + G ++ LVNNA I +L L PE VN
Sbjct: 66 DVSDPESAKAM----ADRTLAEFGGIDYLVNNAAIFG-GMKLDFLLTIDPEYYKKFMSVN 120
Query: 117 VTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKA 176
+ L T+ + + K G IVN SS + + Y +K
Sbjct: 121 LDGALWCTRAVYKKMTKR---------GGGA--IVNQSSTAAWL------YSNYYGLAKV 163
Query: 177 ALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGII 225
+N T+ LS +L G I A+ PG + T+ + P E+ +
Sbjct: 164 GINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTPKEMVDDIVKGL 212
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256 | Back alignment and structure |
|---|
Score = 79.5 bits (197), Expect = 5e-18
Identities = 51/211 (24%), Positives = 85/211 (40%), Gaps = 35/211 (16%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRN---KDKAVELLALAQQHSNLHVI 58
K +L+TG RG+G + + G A + K+ A +
Sbjct: 7 KGVLVTGGARGIGRAIAQAFAREG----ALVALCDLRPEGKEVAEAIGGAF--------F 54
Query: 59 ELDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNV 117
++D+ D ++ + + G ++VLVNNA IA ++ + VN+
Sbjct: 55 QVDLEDERERVRF----VEEAAYALGRVDVLVNNAAIA-APGSALTVRLPEWRRVLEVNL 109
Query: 118 TAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAA 177
TAP+ L+ ++K AIVNV+S+ G + Y SK
Sbjct: 110 TAPMHLSALAAREMRKVG-----------GGAIVNVASVQGLF---AEQENAAYNASKGG 155
Query: 178 LNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
L TRSL++DL +I A+ PG + T+
Sbjct: 156 LVNLTRSLALDLAPLRIRVNAVAPGAIATEA 186
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271 | Back alignment and structure |
|---|
Score = 79.9 bits (198), Expect = 5e-18
Identities = 50/227 (22%), Positives = 79/227 (34%), Gaps = 28/227 (12%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K +ITG G+GL +VL G A + + A A +D
Sbjct: 12 KVAIITGACGGIGLETSRVLARAG----ARVVLADLPETDLAG--AAASVGRGAVHHVVD 65
Query: 62 VTDFSKQQDVLFKDISDVVKDQ--GLNVLVNNAGIAAKFTRLGLLKPEQMTDHFL-VNVT 118
+T+ + V + + D D L+++ NNA + L + D VN
Sbjct: 66 LTN---EVSV--RALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNAR 120
Query: 119 APLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAAL 178
+++ K +P L A AIVN+SS Y C+KAA+
Sbjct: 121 GTMLMCKYAIPRLISAG-----------GGAIVNISSATAHA---AYDMSTAYACTKAAI 166
Query: 179 NAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGII 225
TR ++ + A+ PG V+T P + A
Sbjct: 167 ETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGLPQPIVDIFATHH 213
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277 | Back alignment and structure |
|---|
Score = 79.9 bits (198), Expect = 5e-18
Identities = 42/208 (20%), Positives = 86/208 (41%), Gaps = 26/208 (12%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
+ ++TG G+G ++ G A++ N+D AV + + S + +D
Sbjct: 28 RVCIVTGGGSGIGRATAELFAKNG----AYVVVADVNEDAAVRVAN--EIGSKAFGVRVD 81
Query: 62 VTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAP 120
V+ + + + G ++VLVNNAG + + E VNV
Sbjct: 82 VSSAKDAESM----VEKTTAKWGRVDVLVNNAGFG-TTGNVVTIPEETWDRIMSVNVKGI 136
Query: 121 LMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNA 180
+ +K ++P++++ G +I+N +S + Y SK A+++
Sbjct: 137 FLCSKYVIPVMRRN---------GG--GSIINTTSYTATS---AIADRTAYVASKGAISS 182
Query: 181 ATRSLSIDLKGDKIIATAMHPGWVKTDM 208
TR++++D + I A+ PG + +
Sbjct: 183 LTRAMAMDHAKEGIRVNAVAPGTIDSPY 210
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293 | Back alignment and structure |
|---|
Score = 80.0 bits (198), Expect = 5e-18
Identities = 55/213 (25%), Positives = 88/213 (41%), Gaps = 31/213 (14%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA--LAQQHSNLHVIE 59
+S+L+TG +G+G G+ V G A++ R+ + + A N+ +
Sbjct: 42 RSVLVTGGTKGIGRGIATVFARAG----ANVAVAARSPRELSSVTAELGELGAGNVIGVR 97
Query: 60 LDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLL---KPEQMTDHFLV 115
LDV+D D VV G L+V+ NAGI L PEQ+++ V
Sbjct: 98 LDVSDPGSCADA----ARTVVDAFGALDVVCANAGI----FPEARLDTMTPEQLSEVLDV 149
Query: 116 NVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSK 175
NV + + L L + G R ++ SSI G + G+ Y SK
Sbjct: 150 NVKGTVYTVQACLAPLTAS---------GRGR--VILTSSITGPVTGYP--GWSHYGASK 196
Query: 176 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
AA R+ +I+L + A+ PG + T+
Sbjct: 197 AAQLGFMRTAAIELAPRGVTVNAILPGNILTEG 229
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283 | Back alignment and structure |
|---|
Score = 79.6 bits (197), Expect = 8e-18
Identities = 47/210 (22%), Positives = 86/210 (40%), Gaps = 27/210 (12%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFAT-CRNKDKAVELLA-LAQQHSNLHVIE 59
K L+TG RG+G M L G + + + A E++A + + S+ ++
Sbjct: 30 KVALVTGAGRGIGREMAMELGRRG----CKVIVNYANSTESAEEVVAAIKKNGSDAACVK 85
Query: 60 LDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVT 118
+V +F++ VK G L+++ +N+G+ F + + PE+ F +N
Sbjct: 86 ANVGVVE-DIVRMFEE---AVKIFGKLDIVCSNSGVV-SFGHVKDVTPEEFDRVFTINTR 140
Query: 119 APLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAAL 178
+ + L+ G ++ + SI G + Y SK A+
Sbjct: 141 GQFFVAREAYKHLEIG---------GR----LILMGSITGQAKAV--PKHAVYSGSKGAI 185
Query: 179 NAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
R ++ID+ KI + PG +KTDM
Sbjct: 186 ETFARCMAIDMADKKITVNVVAPGGIKTDM 215
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260 | Back alignment and structure |
|---|
Score = 78.7 bits (195), Expect = 1e-17
Identities = 32/213 (15%), Positives = 70/213 (32%), Gaps = 32/213 (15%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDK---AVELLALAQQHSNLHVI 58
K ++T + GLG L G A + RN++K A +A + + ++
Sbjct: 8 KLAVVTAGSSGLGFASALELARNG----ARLLLFSRNREKLEAAASRIASLVSGAQVDIV 63
Query: 59 ELDVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLL---KPEQMTDHFLV 115
D+ + + G ++LV + G R G E + + +
Sbjct: 64 AGDIREPGDIDRL----FEKARDLGGADILVYSTGG----PRPGRFMELGVEDWDESYRL 115
Query: 116 NVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSK 175
+ + + + + + G R +V + S+ +
Sbjct: 116 LARSAVWVGRRAAEQMVEK---------GWGR--MVYIGSVTLLRPWQDLA---LSNIMR 161
Query: 176 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
+ R+L+++L + A+ P + TD
Sbjct: 162 LPVIGVVRTLALELAPHGVTVNAVLPSLILTDR 194
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263 | Back alignment and structure |
|---|
Score = 78.4 bits (194), Expect = 1e-17
Identities = 39/211 (18%), Positives = 81/211 (38%), Gaps = 31/211 (14%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
+ ++TG ++G+G + + L G A + + A ++A + +E+D
Sbjct: 13 RKAIVTGGSKGIGAAIARALDKAG----ATVAIADLDVMAAQAVVAGLENGG--FAVEVD 66
Query: 62 VTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLL---KPEQMTDHFLVNV 117
VT + + + G ++L NAG+ + + E+ +F VN
Sbjct: 67 VTKRASVDAA----MQKAIDALGGFDLLCANAGV----STMRPAVDITDEEWDFNFDVNA 118
Query: 118 TAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAA 177
+ + ++ ++ IVN +S+ + Y SK A
Sbjct: 119 RGVFLANQIACRHFLASN----------TKGVIVNTASLAAKVGAPLLA---HYSASKFA 165
Query: 178 LNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
+ T++L+ ++ I + PG+VKT M
Sbjct: 166 VFGWTQALAREMAPKNIRVNCVCPGFVKTAM 196
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294 | Back alignment and structure |
|---|
Score = 78.8 bits (195), Expect = 1e-17
Identities = 37/154 (24%), Positives = 61/154 (39%), Gaps = 21/154 (13%)
Query: 56 HVIELDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFL 114
++ D++D S + + + + G L++L AG + L EQ F
Sbjct: 103 VLLPGDLSDESFARSL----VHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFA 158
Query: 115 VNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCS 174
VNV A +T+ +PLL K G+S I+ SSI Y +
Sbjct: 159 VNVFALFWITQEAIPLLPK----------GAS---IITTSSIQA---YQPSPHLLDYAAT 202
Query: 175 KAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
KAA+ +R L+ + I + PG + T +
Sbjct: 203 KAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTAL 236
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249 | Back alignment and structure |
|---|
Score = 77.9 bits (193), Expect = 2e-17
Identities = 55/237 (23%), Positives = 90/237 (37%), Gaps = 31/237 (13%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K +ITG G+G + + G A I E A+ + ++ D
Sbjct: 8 KLAVITGGANGIGRAIAERFAVEG----ADIAIADLVPAPEAEA-AIRNLGRRVLTVKCD 62
Query: 62 VTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLL---KPEQMTDHFLVNV 117
V+ + V+ G ++LVNNAGI L EQ F +NV
Sbjct: 63 VSQPGDVEAF----GKQVISTFGRCDILVNNAGI----YPLIPFDELTFEQWKKTFEINV 114
Query: 118 TAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAA 177
+ ++ K +P +K+ G R I+N++S ++ Y +KAA
Sbjct: 115 DSGFLMAKAFVPGMKRN---------GWGR--IINLTSTTYWLKIEAYT---HYISTKAA 160
Query: 178 LNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQSLGEA 234
TR+L+ DL D I A+ P V+T ++A + ++Q I L
Sbjct: 161 NIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVP 217
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239 | Back alignment and structure |
|---|
Score = 77.9 bits (193), Expect = 2e-17
Identities = 39/213 (18%), Positives = 79/213 (37%), Gaps = 40/213 (18%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
+ L+TG +RG+G + + LV G + RN ++A + L + D
Sbjct: 3 RKALVTGGSRGIGRAIAEALVARG----YRVAIASRNPEEAAQSLGA-------VPLPTD 51
Query: 62 VTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDH-----FLV 115
+ + V ++ G L+VLV+ A + +++ +
Sbjct: 52 LEKDDPKGLV-----KRALEALGGLHVLVHAAAV----NVRKPA--LELSYEEWRRVLYL 100
Query: 116 NVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSK 175
++ +L + P + +A G R ++ + S+ Y +K
Sbjct: 101 HLDVAFLLAQAAAPHMAEA---------GWGR--VLFIGSVTTFTAGGPVP-IPAYTTAK 148
Query: 176 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
AL TR+L+ + I + PG+V+T+
Sbjct: 149 TALLGLTRALAKEWARLGIRVNLLCPGYVETEF 181
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262 | Back alignment and structure |
|---|
Score = 78.3 bits (194), Expect = 2e-17
Identities = 36/229 (15%), Positives = 76/229 (33%), Gaps = 30/229 (13%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHI---FATCRNKDKAVELLALAQQH-SNLHV 57
K I+I G + LG K ++ + ++ D A +L + + + +
Sbjct: 12 KVIVIAGGIKNLGALTAKTFALES----VNLVLHYHQAKDSDTANKLKDELEDQGAKVAL 67
Query: 58 IELDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVN 116
+ D+++ + LF K+ G +++ +N G + + +N
Sbjct: 68 YQSDLSNEE-EVAKLFDF---AEKEFGKVDIAINTVGKV-LKKPIVETSEAEFDAMDTIN 122
Query: 117 VTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKA 176
K + G I+ +++ + + G + Y +KA
Sbjct: 123 NKVAYFFIKQAAKHMNPN---------GH----IITIATSLLAA---YTGFYSTYAGNKA 166
Query: 177 ALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGII 225
+ TR+ S +L +I A+ PG + T E A
Sbjct: 167 PVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQETKESTAFHKSQA 215
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267 | Back alignment and structure |
|---|
Score = 78.0 bits (193), Expect = 2e-17
Identities = 40/213 (18%), Positives = 79/213 (37%), Gaps = 35/213 (16%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K+ L+TG G+G + LV G A++ R ++ E + + +++
Sbjct: 11 KTALVTGSTAGIGKAIATSLVAEG----ANVLINGRREENVNETIKEIRAQYPDAILQPV 66
Query: 62 VTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTD-----HFLV 115
V D +Q DV++ +++L+NN GI + D F V
Sbjct: 67 VADLGTEQGC-----QDVIEKYPKVDILINNLGI----FEPVEY--FDIPDEDWFKLFEV 115
Query: 116 NVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSK 175
N+ + + LT++ L + + R ++ ++S Y +K
Sbjct: 116 NIMSGVRLTRSYLKKMIER---------KEGR--VIFIASEAAI---MPSQEMAHYSATK 161
Query: 176 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
+ +RSL+ G + + PG T+
Sbjct: 162 TMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEG 194
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267 | Back alignment and structure |
|---|
Score = 78.0 bits (193), Expect = 2e-17
Identities = 40/209 (19%), Positives = 75/209 (35%), Gaps = 22/209 (10%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
+ +LITG GLG L G A + + + A + + +
Sbjct: 14 RVVLITGGGSGLGRATAVRLAAEG----AKLSLVDVSSEGLEASKAAVLETAPDAEVLTT 69
Query: 62 VTDFSKQQDVLFKDISDVVKDQ--GLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTA 119
V D S + V + ++ ++ NNAGI K + +N+
Sbjct: 70 VADVSDEAQV--EAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRG 127
Query: 120 PLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALN 179
+ + +L ++++ GS +VN +S+ G G Y +K +
Sbjct: 128 VFLGLEKVLKIMREQ---------GS--GMVVNTASVGGIR---GIGNQSGYAAAKHGVV 173
Query: 180 AATRSLSIDLKGDKIIATAMHPGWVKTDM 208
TR+ +++ I A+ PG + T M
Sbjct: 174 GLTRNSAVEYGRYGIRINAIAPGAIWTPM 202
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270 | Back alignment and structure |
|---|
Score = 78.0 bits (193), Expect = 2e-17
Identities = 50/226 (22%), Positives = 82/226 (36%), Gaps = 27/226 (11%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFAT-CRNKDKAVELLALAQQH-SNLHVIE 59
K L+TG RG+G + L LG A + + A ++++ + S+ I+
Sbjct: 19 KVALVTGSGRGIGAAVAVHLGRLG----AKVVVNYANSTKDAEKVVSEIKALGSDAIAIK 74
Query: 60 LDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVT 118
D+ + LF V G L++ V+N+G+ F L + E+ F +N
Sbjct: 75 ADIRQVP-EIVKLFDQ---AVAHFGHLDIAVSNSGVV-SFGHLKDVTEEEFDRVFSLNTR 129
Query: 119 APLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAAL 178
+ + L + G IV SS Y SK A+
Sbjct: 130 GQFFVAREAYRHLTEG---------GR----IVLTSSNTSKDFSV--PKHSLYSGSKGAV 174
Query: 179 NAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGI 224
++ R S D KI A+ PG TDM + + T+
Sbjct: 175 DSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYT 220
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247 | Back alignment and structure |
|---|
Score = 77.5 bits (192), Expect = 2e-17
Identities = 46/213 (21%), Positives = 96/213 (45%), Gaps = 33/213 (15%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIEL 60
K L+TG +RG+G + L G A + T ++ A + + ++ + L
Sbjct: 6 KVALVTGASRGIGFEVAHALASKG----ATVVGTATSQASAEKFENSMKEKGFKARGLVL 61
Query: 61 DVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLL---KPEQMTDHFLVN 116
+++D Q+ +++ + +++LVNNAGI TR L+ ++ N
Sbjct: 62 NISDIESIQNF----FAEIKAENLAIDILVNNAGI----TRDNLMMRMSEDEWQSVINTN 113
Query: 117 VTAPLMLTKTML-PLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSK 175
+++ ++K + ++KK G I+++ S++GS + Q Y +K
Sbjct: 114 LSSIFRMSKECVRGMMKKRW--------GR----IISIGSVVGSAGNPGQTN---YCAAK 158
Query: 176 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
A + ++SL+ ++ I + PG++ TDM
Sbjct: 159 AGVIGFSKSLAYEVASRNITVNVVAPGFIATDM 191
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255 | Back alignment and structure |
|---|
Score = 77.3 bits (191), Expect = 3e-17
Identities = 38/211 (18%), Positives = 62/211 (29%), Gaps = 24/211 (11%)
Query: 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIEL 60
M I ITG G+G + ++L G + R + L+ +
Sbjct: 1 MSVIAITGSASGIGAALKELLARAG----HTVIGIDRGQADIEADLSTPGGRE--TAVAA 54
Query: 61 DVTDFSKQQDVLFKD--ISDVVKDQGLNVLVNNAGIAAKFTRLG-LLKPEQMTDHFLVNV 117
+ D L + + GL V VN G++A L L Q +V
Sbjct: 55 VLDRCGGVLDGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGS 114
Query: 118 TAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAA 177
A LP+++ + Y SK A
Sbjct: 115 IAATQPGAAELPMVEAML-----------AGDEARAIELAEQ----QGQTHLAYAGSKYA 159
Query: 178 LNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
+ R +D G + + PG V+T +
Sbjct: 160 VTCLARRNVVDWAGRGVRLNVVAPGAVETPL 190
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272 | Back alignment and structure |
|---|
Score = 77.6 bits (192), Expect = 4e-17
Identities = 52/227 (22%), Positives = 95/227 (41%), Gaps = 21/227 (9%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFAT-CRNKDKAVELLALAQQH-SNLHVIE 59
+L+TG +RG+G + ++ G + N++ A ++A + I
Sbjct: 27 PVVLVTGGSRGIGAAVCRLAARQG----WRVGVNYAANREAADAVVAAITESGGEAVAIP 82
Query: 60 LDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVT 118
DV + + +F V + G L+ LVNNAGI R+ + E++ VNVT
Sbjct: 83 GDVGNAA-DIAAMFSA---VDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVT 138
Query: 119 APLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAAL 178
++ + + + AIVNVSS+ + + + Y SKAA+
Sbjct: 139 GSILCAAEAVRRMSRLY--------SGQGGAIVNVSSMAAIL--GSATQYVDYAASKAAI 188
Query: 179 NAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGII 225
+ T L+ ++ + I A+ PG ++TD+ S + A +
Sbjct: 189 DTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGGLPDRAREMAPSV 235
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261 | Back alignment and structure |
|---|
Score = 76.8 bits (190), Expect = 5e-17
Identities = 41/210 (19%), Positives = 81/210 (38%), Gaps = 25/210 (11%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHI-FATCRNKDKAVELLALAQQH-SNLHVIE 59
K ++ITG + GLG M A + +D+A +L ++ ++
Sbjct: 8 KVVVITGSSTGLGKSMAIRFATEK----AKVVVNYRSKEDEANSVLEEIKKVGGEAIAVK 63
Query: 60 LDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVT 118
DVT S ++ + +K+ G L+V++NNAG+ + N+T
Sbjct: 64 GDVTVESDVINL----VQSAIKEFGKLDVMINNAGLE-NPVSSHEMSLSDWNKVIDTNLT 118
Query: 119 APLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAAL 178
+ ++ + + G+ ++N+SS+ I F Y SK +
Sbjct: 119 GAFLGSREAIKYFVENDIK------GT----VINMSSVHEKI---PWPLFVHYAASKGGM 165
Query: 179 NAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
T +L+++ I + PG + T +
Sbjct: 166 KLMTETLALEYAPKGIRVNNIGPGAINTPI 195
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285 | Back alignment and structure |
|---|
Score = 77.3 bits (191), Expect = 5e-17
Identities = 32/224 (14%), Positives = 76/224 (33%), Gaps = 31/224 (13%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNL------ 55
K++ I+G +RG+GL + K + G A++ ++ + +L +
Sbjct: 10 KTMFISGGSRGIGLAIAKRVAADG----ANVALVAKSAEPHPKLPGTIYTAAKEIEEAGG 65
Query: 56 --HVIELDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDH 112
I D+ D ++ V+ G +++ VNNA + + ++
Sbjct: 66 QALPIVGDIRDGDAVAAA----VAKTVEQFGGIDICVNNASAI-NLGSIEEVPLKRFDLM 120
Query: 113 FLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYR 172
+ V ++++ +P +K I+ +S + + PY
Sbjct: 121 NGIQVRGTYAVSQSCIPHMKG-----------RDNPHILTLSPPIR--LEPKWLRPTPYM 167
Query: 173 CSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLE 216
+K + ++ +L+ I + + P N
Sbjct: 168 MAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATAAVQNLLGG 211
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271 | Back alignment and structure |
|---|
Score = 76.8 bits (190), Expect = 7e-17
Identities = 51/213 (23%), Positives = 82/213 (38%), Gaps = 27/213 (12%)
Query: 5 LITGCNRGLGLGMIKVLVGLGNNQPAHIFAT-CRNKDKAVELLA-LAQQHSNLHVIELDV 62
+TG +RG+G + K L G A + T ++A +++ + Q I D
Sbjct: 35 FVTGGSRGIGAAIAKRLALEG----AAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADN 90
Query: 63 TDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPL 121
D + ++ V+ G L++LVN+AGI L + VN AP
Sbjct: 91 RDAE-AIEQAIRE---TVEALGGLDILVNSAGIW-HSAPLEETTVADFDEVMAVNFRAPF 145
Query: 122 MLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNAA 181
+ ++ L G I+ + S + + G Y SKAAL
Sbjct: 146 VAIRSASRHLGDG---------GR----IITIGSNLAELVPWP--GISLYSASKAALAGL 190
Query: 182 TRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAP 214
T+ L+ DL I +HPG TDM ++
Sbjct: 191 TKGLARDLGPRGITVNIVHPGSTDTDMNPADGD 223
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277 | Back alignment and structure |
|---|
Score = 76.8 bits (190), Expect = 7e-17
Identities = 53/230 (23%), Positives = 89/230 (38%), Gaps = 28/230 (12%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K ++TG G+GL + + L G H+ + D A A + +D
Sbjct: 30 KVAIVTGAGAGIGLAVARRLADEG----CHVLCADIDGDAADA--AATKIGCGAAACRVD 83
Query: 62 VTDFSKQQDVLFKDISDVVKDQ--GLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTA 119
V+D +Q + + D G++ LV NAG+ L E +N+
Sbjct: 84 VSD---EQQI--IAMVDACVAAFGGVDKLVANAGVV-HLASLIDTTVEDFDRVIAINLRG 137
Query: 120 PLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALN 179
+ TK P + + AIVN+SS+ G + GG Y SKA +
Sbjct: 138 AWLCTKHAAPRMIERG-----------GGAIVNLSSLAGQV---AVGGTGAYGMSKAGII 183
Query: 180 AATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQ 229
+R + +L+ I + + P +V T M + + GA AG + +
Sbjct: 184 QLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMI 233
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346 | Back alignment and structure |
|---|
Score = 77.6 bits (191), Expect = 7e-17
Identities = 42/217 (19%), Positives = 77/217 (35%), Gaps = 32/217 (14%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNL------ 55
++ ITG +RG+G + G A+I + +LL +
Sbjct: 46 CTVFITGASRGIGKAIALKAAKDG----ANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGG 101
Query: 56 --HVIELDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDH 112
+DV D + + +K G +++LVNNA T +++
Sbjct: 102 KALPCIVDVRDEQQISAA----VEKAIKKFGGIDILVNNASA-ISLTNTLDTPTKRLDLM 156
Query: 113 FLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYR 172
VN + +K +P LKK S A I+N+S + + Y
Sbjct: 157 MNVNTRGTYLASKACIPYLKK-----------SKVAHILNISPPLN-LNPVWFKQHCAYT 204
Query: 173 CSKAALNAATRSLSIDLKGDKIIATAMHPGW-VKTDM 208
+K ++ ++ + KG+ I A+ P + T
Sbjct: 205 IAKYGMSMYVLGMAEEFKGE-IAVNALWPKTAIHTAA 240
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250 | Back alignment and structure |
|---|
Score = 76.0 bits (188), Expect = 1e-16
Identities = 48/212 (22%), Positives = 82/212 (38%), Gaps = 27/212 (12%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA--LAQQHSNLHVIE 59
+ ++TG + G GL + + G + A + + E + +
Sbjct: 3 RVAIVTGASSGNGLAIATRFLARG----DRVAALDLSAETLEETARTHWHAYADKVLRVR 58
Query: 60 LDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIA--AKFTRLGLLKPEQMTDHFLVN 116
DV D I+ ++ G ++VLVNNAGI ++ L EQ VN
Sbjct: 59 ADVADEGDVNAA----IAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVN 114
Query: 117 VTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKA 176
V + + +LP + IVN++S+ + G Y SK
Sbjct: 115 VRGIFLGCRAVLPHMLLQG-----------AGVIVNIASVASLV---AFPGRSAYTTSKG 160
Query: 177 ALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
A+ T+S+++D G I A+ PG ++T M
Sbjct: 161 AVLQLTKSVAVDYAGSGIRCNAVCPGMIETPM 192
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250 | Back alignment and structure |
|---|
Score = 76.0 bits (188), Expect = 1e-16
Identities = 47/211 (22%), Positives = 74/211 (35%), Gaps = 39/211 (18%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K++ +TG +G+G V G A + + A Q+ +D
Sbjct: 8 KNVWVTGAGKGIGYATALAFVEAG----AKVTGFDQ---------AFTQEQYPFATEVMD 54
Query: 62 VTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLL---KPEQMTDHFLVNV 117
V D ++ V ++ + L+ LVN AGI R+G E F VNV
Sbjct: 55 VADAAQVAQV----CQRLLAETERLDALVNAAGI----LRMGATDQLSKEDWQQTFAVNV 106
Query: 118 TAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAA 177
L + + ++ IV V+S Y SKAA
Sbjct: 107 GGAFNLFQQTMNQFRRQ---------RGGA--IVTVASDAAHTPRIGMSA---YGASKAA 152
Query: 178 LNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
L + S+ ++L G + + PG TDM
Sbjct: 153 LKSLALSVGLELAGSGVRCNVVSPGSTDTDM 183
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260 | Back alignment and structure |
|---|
Score = 75.7 bits (187), Expect = 2e-16
Identities = 51/214 (23%), Positives = 88/214 (41%), Gaps = 33/214 (15%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA---LAQQHSNLHVI 58
K ++TG G+GLG+ L G A I +E + AQ +
Sbjct: 5 KVAVVTGSTSGIGLGIATALAAQG----ADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYD 60
Query: 59 ELDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLL---KPEQMTDHFL 114
D++ + + + + V+ G +++LVNNAGI L+ E+
Sbjct: 61 GADLSKGEAVRGL----VDNAVRQMGRIDILVNNAGI----QHTALIEDFPTEKWDAILA 112
Query: 115 VNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCS 174
+N++A T LP +KK G R I+N++S G + + Y +
Sbjct: 113 LNLSAVFHGTAAALPHMKKQ---------GFGR--IINIASAHGLVASANKS---AYVAA 158
Query: 175 KAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
K + T+ +++ G I A A+ PGWV+T +
Sbjct: 159 KHGVVGFTKVTALETAGQGITANAICPGWVRTPL 192
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287 | Back alignment and structure |
|---|
Score = 75.7 bits (187), Expect = 2e-16
Identities = 48/230 (20%), Positives = 73/230 (31%), Gaps = 38/230 (16%)
Query: 5 LITGCNRGLGLGMIKVLVGLG--------NNQPAHIFATCRNKDKAVELLALAQQH-SNL 55
L+TG RG G L G + E ++
Sbjct: 14 LVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKA 73
Query: 56 HVIELDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFL 114
+ E+DV D + +++ V + G L+V+V NAGI L + D F
Sbjct: 74 YTAEVDVRDRAAVSRE----LANAVAEFGKLDVVVANAGICPLGAHL---PVQAFADAFD 126
Query: 115 VNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG--------SIEDNTQG 166
V+ + LP L A+I+ S+ G
Sbjct: 127 VDFVGVINTVHAALPYLTS-------------GASIITTGSVAGLIAAAQPPGAGGPQGP 173
Query: 167 GFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLE 216
G Y +K +++ T L+ L I A +HP V TDM S
Sbjct: 174 GGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYR 223
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277 | Back alignment and structure |
|---|
Score = 75.3 bits (186), Expect = 2e-16
Identities = 55/230 (23%), Positives = 86/230 (37%), Gaps = 29/230 (12%)
Query: 2 KSILITGCNRGLGL---------GMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQH 52
+ ITG RG G G + V + P+ + + D E + L +
Sbjct: 12 RVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAA 71
Query: 53 -SNLHVIELDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMT 110
+ +D DF + + V + D V G L+++V NAG+AA + PE
Sbjct: 72 NRRIVAAVVDTRDFDRLRKV----VDDGVAALGRLDIIVANAGVAA-PQAWDDITPEDFR 126
Query: 111 DHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHP 170
D +NVT P + + +I+ +SS G Q
Sbjct: 127 DVMDINVTGTWNTVMAGAPRIIEGGRG----------GSIILISSAAGMK---MQPFMIH 173
Query: 171 YRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAA 220
Y SK A+ R+ + +L I ++HPG V T MG + VG A
Sbjct: 174 YTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQA 223
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266 | Back alignment and structure |
|---|
Score = 75.3 bits (186), Expect = 2e-16
Identities = 48/212 (22%), Positives = 95/212 (44%), Gaps = 34/212 (16%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
+ L+TG G+G + + G A + +DK E+ A ++ V +
Sbjct: 28 RKALVTGATGGIGEAIARCFHAQG----AIVGLHGTREDKLKEIAA--DLGKDVFVFSAN 81
Query: 62 VTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLL---KPEQMTDHFLVNV 117
++D + + ++ +++LVNNAGI TR GL + + D VN+
Sbjct: 82 LSDRKSIKQL----AEVAEREMEGIDILVNNAGI----TRDGLFVRMQDQDWDDVLAVNL 133
Query: 118 TAPLMLTKTML-PLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKA 176
TA LT+ ++ ++++ G I+N++SI+G + + Q Y +KA
Sbjct: 134 TAASTLTRELIHSMMRRRY--------GR----IINITSIVGVVGNPGQTN---YCAAKA 178
Query: 177 ALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
L +++L+ ++ I + PG++K+ M
Sbjct: 179 GLIGFSKALAQEIASRNITVNCIAPGFIKSAM 210
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276 | Back alignment and structure |
|---|
Score = 75.0 bits (185), Expect = 3e-16
Identities = 48/233 (20%), Positives = 77/233 (33%), Gaps = 35/233 (15%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCR-NKDKAVELLALAQQHS--NLHVI 58
+ +ITG R +G + L G + R ++ A L+A + +
Sbjct: 12 PAAVITGGARRIGHSIAVRLHQQG----FRVVVHYRHSEGAAQRLVAELNAARAGSAVLC 67
Query: 59 ELDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLL------------- 104
+ D++ S D I + G +VLVNNA L
Sbjct: 68 KGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASA----YYPTPLLPGDDTNGAADAK 123
Query: 105 -KPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDN 163
Q+ + F N APL L + + S ++VN+ M +
Sbjct: 124 PIDAQVAELFGSNAVAPLFLIRAFARRQGEG------GAWRSRNLSVVNLCDAMTDL--- 174
Query: 164 TQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLE 216
GF Y +K AL TR+ +++L I A+ PG E
Sbjct: 175 PLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMPQETQE 227
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264 | Back alignment and structure |
|---|
Score = 74.9 bits (185), Expect = 3e-16
Identities = 51/212 (24%), Positives = 84/212 (39%), Gaps = 33/212 (15%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIEL 60
K ILITG + G+G G+ + L G A I R + + + + L
Sbjct: 5 KVILITGASGGIGEGIARELGVAG----AKILLGARRQARIEAIATEIRDAGGTALAQVL 60
Query: 61 DVTDFSKQQDVLFKDISDVVKD-QGLNVLVNNAGIAAKFTRLGLLKPE---QMTDHFLVN 116
DVTD + V V ++VLVNNAG+ + L +K + +M D VN
Sbjct: 61 DVTD---RHSV-AAFAQAAVDTWGRIDVLVNNAGVMP-LSPLAAVKVDEWERMID---VN 112
Query: 117 VTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKA 176
+ L +LP+++ I+N+ SI Y +K
Sbjct: 113 IKGVLWGIGAVLPIMEA-----------QRSGQIINIGSIGALS---VVPTAAVYCATKF 158
Query: 177 ALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
A+ A + L + I T ++PG V++++
Sbjct: 159 AVRAISDGLRQESTN--IRVTCVNPGVVESEL 188
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281 | Back alignment and structure |
|---|
Score = 75.0 bits (185), Expect = 3e-16
Identities = 43/211 (20%), Positives = 87/211 (41%), Gaps = 27/211 (12%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA---LAQQHSNLHVI 58
K+ +ITG G+GL + + L G A+I + + +
Sbjct: 26 KTAVITGSTSGIGLAIARTLAKAG----ANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHH 81
Query: 59 ELDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNV 117
D+T S+ D+ ++ V G ++LVNNAG+ ++ EQ VN+
Sbjct: 82 PADMTKPSEIADM----MAMVADRFGGADILVNNAGVQ-FVEKIEDFPVEQWDRIIAVNL 136
Query: 118 TAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAA 177
++ + +P +KK G R I+N++S G + + Y +K
Sbjct: 137 SSSFHTIRGAIPPMKKK---------GWGR--IINIASAHGLVASPFKS---AYVAAKHG 182
Query: 178 LNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
+ T+++++++ + ++ PG+V T +
Sbjct: 183 IMGLTKTVALEVAESGVTVNSICPGYVLTPL 213
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249 | Back alignment and structure |
|---|
Score = 73.7 bits (182), Expect = 6e-16
Identities = 53/212 (25%), Positives = 95/212 (44%), Gaps = 38/212 (17%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K+ LITG + G+G + ++L LG + + + N++K L + N + +
Sbjct: 15 KTSLITGASSGIGSAIARLLHKLG----SKVIISGSNEEKLKSLGNALKD--NYTIEVCN 68
Query: 62 VTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLL---KPEQMTDHFLVNV 117
+ + + S+++ L++LV NAGI T L K + +N+
Sbjct: 69 LANKE--------ECSNLISKTSNLDILVCNAGI----TSDTLAIRMKDQDFDKVIDINL 116
Query: 118 TAPLMLTKTML-PLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKA 176
A +L + + +++K G I+N+SSI+G + Q Y SKA
Sbjct: 117 KANFILNREAIKKMIQKRY--------GR----IINISSIVGIAGNPGQAN---YCASKA 161
Query: 177 ALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
L T+SLS ++ I A+ PG++K+DM
Sbjct: 162 GLIGMTKSLSYEVATRGITVNAVAPGFIKSDM 193
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285 | Back alignment and structure |
|---|
Score = 74.1 bits (183), Expect = 7e-16
Identities = 51/213 (23%), Positives = 92/213 (43%), Gaps = 33/213 (15%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIEL 60
K L+TG RG+G + K+L +H+ R + ++ +
Sbjct: 45 KVALVTGAGRGIGREIAKMLAKSV----SHVICISRTQKSCDSVVDEIKSFGYESSGYAG 100
Query: 61 DVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLL---KPEQMTDHFLVN 116
DV+ + +V I+ ++ + +++LVNNAGI TR L K ++ D N
Sbjct: 101 DVSKKEEISEV----INKILTEHKNVDILVNNAGI----TRDNLFLRMKNDEWEDVLRTN 152
Query: 117 VTAPLMLTKTML-PLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSK 175
+ + +T+ + ++ G I+N+SSI+G + Q Y SK
Sbjct: 153 LNSLFYITQPISKRMINNRY--------GR----IINISSIVGLTGNVGQAN---YSSSK 197
Query: 176 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
A + T+SL+ +L I A+ PG++ +DM
Sbjct: 198 AGVIGFTKSLAKELASRNITVNAIAPGFISSDM 230
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302 | Back alignment and structure |
|---|
Score = 74.2 bits (183), Expect = 8e-16
Identities = 50/220 (22%), Positives = 89/220 (40%), Gaps = 37/220 (16%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDK---AVELLALAQQHSNLHVI 58
K ITG GLG GM +L LG A R D E ++ +Q + +H I
Sbjct: 27 KVAFITGGGTGLGKGMTTLLSSLG----AQCVIASRKMDVLKATAEQIS-SQTGNKVHAI 81
Query: 59 ELDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMT-DHFL-- 114
+ DV D Q+ +S+++K G N+++NNA + E+++ + +
Sbjct: 82 QCDVRDPDMVQNT----VSELIKVAGHPNIVINNAAG----NFISPT--ERLSPNAWKTI 131
Query: 115 --VNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYR 172
+ + +T + L KA AA +++++I G P
Sbjct: 132 TDIVLNGTAFVTLEIGKQLIKAQ----------KGAAFLSITTIYAE---TGSGFVVPSA 178
Query: 173 CSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN 212
+KA + A ++SL+ + + + PG +KT S
Sbjct: 179 SAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSR 218
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278 | Back alignment and structure |
|---|
Score = 73.7 bits (182), Expect = 8e-16
Identities = 43/234 (18%), Positives = 80/234 (34%), Gaps = 25/234 (10%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K +ITG G+G K+ V G A + D ++ + + D
Sbjct: 17 KVAIITGGAGGIGETTAKLFVRYG----AKVVIADIADDHGQKVCNNIGSPDVISFVHCD 72
Query: 62 VTDFSKQQDVLFKDISDVVKDQ--GLNVLVNNAGIAAKFTRLGLLKPEQMTDHFL-VNVT 118
VT +DV +++ D + L+++ N G+ + L + + +NV
Sbjct: 73 VTK---DEDV--RNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVY 127
Query: 119 APLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAAL 178
++ K ++ A + +IV +SI +G H Y +K A+
Sbjct: 128 GAFLVAKHAARVMIPAK-----------KGSIVFTASISSFT--AGEGVSHVYTATKHAV 174
Query: 179 NAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQSLG 232
T SL +L I + P V + + ++ Q G
Sbjct: 175 LGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKG 228
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267 | Back alignment and structure |
|---|
Score = 73.7 bits (182), Expect = 9e-16
Identities = 39/216 (18%), Positives = 77/216 (35%), Gaps = 34/216 (15%)
Query: 2 KSILITGC--NRGLGLGMIKVLVGLGNNQPAHI-FATCRNKDKAVELLALAQQHSNLHV- 57
K +++TG +G+G+ + +G A + A E + ++ +
Sbjct: 21 KVVVVTGASGPKGMGIEAARGCAEMG----AAVAITYASRAQGAEENVKELEKTYGIKAK 76
Query: 58 -IELDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLL---KPEQMTDH 112
+ V + + + + DVV D G ++ + NAG T + E
Sbjct: 77 AYKCQVDSYESCEKL----VKDVVADFGQIDAFIANAGA----TADSGILDGSVEAWNHV 128
Query: 113 FLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYR 172
V++ K + K+ G+ +V +S+ G I N Y
Sbjct: 129 VQVDLNGTFHCAKAVGHHFKER---------GTGS--LVITASMSGHI-ANFPQEQTSYN 176
Query: 173 CSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
+KA RSL+ + D ++ PG++ T +
Sbjct: 177 VAKAGCIHMARSLANEW-RDFARVNSISPGYIDTGL 211
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288 | Back alignment and structure |
|---|
Score = 73.8 bits (182), Expect = 9e-16
Identities = 44/226 (19%), Positives = 76/226 (33%), Gaps = 37/226 (16%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCR-NKDKAVELLA--LAQQHSNLHVI 58
+ ++TG + +G + L G + + + AV L ++ + V
Sbjct: 24 PAAVVTGAAKRIGRAIAVKLHQTG----YRVVIHYHNSAEAAVSLADELNKERSNTAVVC 79
Query: 59 ELDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFL--- 114
+ D+T+ + + I+ + G +VLVNNA L D+
Sbjct: 80 QADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASA----FYPTPLVQGDHEDNSNGKT 135
Query: 115 ----------VNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNT 164
N AP +LT + K + SS +IVN+ M
Sbjct: 136 VETQVAELIGTNAIAPFLLTMSFAQRQKGTNPN-----CTSSNLSIVNLCDAMVDQ---- 186
Query: 165 QG--GFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
F Y K AL T+S +++L I + PG +
Sbjct: 187 -PCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV 231
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267 | Back alignment and structure |
|---|
Score = 73.0 bits (180), Expect = 1e-15
Identities = 50/213 (23%), Positives = 82/213 (38%), Gaps = 34/213 (15%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKA---VELLALAQQHSNLHVI 58
K L+TG +G+G + L+ G A + N + L + I
Sbjct: 8 KVALVTGAAQGIGRAFAEALLLKG----AKVALVDWNLEAGVQCKAALHEQFEPQKTLFI 63
Query: 59 ELDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNV 117
+ DV D + +D VV G L++LVNNAG+ + +N+
Sbjct: 64 QCDVADQQQLRDT----FRKVVDHFGRLDILVNNAGVN---------NEKNWEKTLQINL 110
Query: 118 TAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAA 177
+ + T L + K + G I+N+SS+ G + Q Y SK
Sbjct: 111 VSVISGTYLGLDYMSKQN--------GGEGGIIINMSSLAGLMPVAQQP---VYCASKHG 159
Query: 178 LNAATRS--LSIDLKGDKIIATAMHPGWVKTDM 208
+ TRS L+ +L + A+ PG+V T +
Sbjct: 160 IVGFTRSAALAANLMNSGVRLNAICPGFVNTAI 192
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249 | Back alignment and structure |
|---|
Score = 73.0 bits (180), Expect = 1e-15
Identities = 44/227 (19%), Positives = 76/227 (33%), Gaps = 42/227 (18%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K +L+ +RG+G + VL G A + RN++
Sbjct: 20 KGVLVLAASRGIGRAVADVLSQEG----AEVTICARNEELLKRS-----------GHRYV 64
Query: 62 VTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLL---KPEQMTDHFLVNVT 118
V D K D+LF+ + +V ++LV NAG + G E +
Sbjct: 65 VCDLRKDLDLLFEKVKEV------DILVLNAGG----PKAGFFDELTNEDFKEAIDSLFL 114
Query: 119 APLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAAL 178
+ + + LP +K+ G R IV ++S ++ AL
Sbjct: 115 NMIKIVRNYLPAMKEK---------GWGR--IVAITSFSVISPIENLYT---SNSARMAL 160
Query: 179 NAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGII 225
++LS ++ I + PGW +T+ E I
Sbjct: 161 TGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEKKKQVESQI 207
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286 | Back alignment and structure |
|---|
Score = 73.4 bits (181), Expect = 1e-15
Identities = 34/164 (20%), Positives = 60/164 (36%), Gaps = 18/164 (10%)
Query: 58 IELDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVN 116
E+DV D+ + + V+ G L+++V NAGI L E T+ +N
Sbjct: 81 AEVDVRDYDALKAA----VDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDIN 136
Query: 117 VTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKA 176
+ K +P + G +I+ SS+ G Y +K
Sbjct: 137 LAGVWKTVKAGVPHMIAG---------GRG-GSIILTSSVGGLK---AYPHTGHYVAAKH 183
Query: 177 ALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAA 220
+ R+ ++L I ++HP VKT M + ++
Sbjct: 184 GVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRP 227
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291 | Back alignment and structure |
|---|
Score = 73.3 bits (181), Expect = 1e-15
Identities = 40/154 (25%), Positives = 65/154 (42%), Gaps = 21/154 (13%)
Query: 56 HVIELDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFL 114
++ D++D +D+ + + V+ G LN+LVNN L + EQ+ F
Sbjct: 100 VLLPGDLSDEQHCKDI----VQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFR 155
Query: 115 VNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCS 174
+N+ + +TK L LK+ G I+N +SI+ Y +
Sbjct: 156 INIFSYFHVTKAALSHLKQ----------GDV---IINTASIVA---YEGNETLIDYSAT 199
Query: 175 KAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
K A+ A TRSLS L I + PG + T +
Sbjct: 200 KGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPL 233
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257 | Back alignment and structure |
|---|
Score = 72.7 bits (179), Expect = 2e-15
Identities = 50/257 (19%), Positives = 81/257 (31%), Gaps = 68/257 (26%)
Query: 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIEL 60
M I+I+GC G+G KVL G I + +
Sbjct: 1 MSIIVISGCATGIGAATRKVLEAAG----HQIVGIDIRDAEVIA---------------- 40
Query: 61 DVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAP 120
D++ ++ + ++ +G++ LV AG+ + LG + VN
Sbjct: 41 DLSTAEGRKQAIADVLAKC--SKGMDGLVLCAGLGPQTKVLGNV--------VSVNYFGA 90
Query: 121 LMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI-------------------- 160
L LP LKK + A V +SS+ +
Sbjct: 91 TELMDAFLPALKK-----------GHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKA 139
Query: 161 -----EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPL 215
QGG Y SK AL A R + + + PG +T + A L
Sbjct: 140 RAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPL--LQAGL 197
Query: 216 EVGAATAGIIQFIQSLG 232
+ I +F+ +G
Sbjct: 198 QDPRYGESIAKFVPPMG 214
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248 | Back alignment and structure |
|---|
Score = 72.1 bits (178), Expect = 2e-15
Identities = 51/214 (23%), Positives = 93/214 (43%), Gaps = 34/214 (15%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA--LAQQHSNLHVIE 59
K L+TG RG+G + + L G + + T + ++A + + H +E
Sbjct: 8 KVSLVTGSTRGIGRAIAEKLASAG----STVIITGTSGERAKAVAEEIANKYGVKAHGVE 63
Query: 60 LDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLL---KPEQMTDHFLV 115
+++ ++ +++LVNNAGI TR L + V
Sbjct: 64 MNLLSEESINKA----FEEIYNLVDGIDILVNNAGI----TRDKLFLRMSLLDWEEVLKV 115
Query: 116 NVTAPLMLTKTML-PLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCS 174
N+T ++T+ L ++K+ G IVN+SS++G + Q Y +
Sbjct: 116 NLTGTFLVTQNSLRKMIKQRW--------GR----IVNISSVVGFTGNVGQVN---YSTT 160
Query: 175 KAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
KA L T+SL+ +L ++ A+ PG+++TDM
Sbjct: 161 KAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDM 194
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255 | Back alignment and structure |
|---|
Score = 72.2 bits (178), Expect = 2e-15
Identities = 44/211 (20%), Positives = 87/211 (41%), Gaps = 31/211 (14%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K+ L+TG G+GLG+ +VL G A+I +A+ D
Sbjct: 5 KTALVTGSTSGIGLGIAQVLARAG----ANIVLNGFGDPAPALA-EIARHGVKAVHHPAD 59
Query: 62 VTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLL---KPEQMTDHFLVNV 117
++D ++ + + + ++ G +++LVNNAGI + + E +N+
Sbjct: 60 LSDVAQIEAL----FALAEREFGGVDILVNNAGI----QHVAPVEQFPLESWDKIIALNL 111
Query: 118 TAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAA 177
+A T+ LP ++ R I+N++S+ G + + Y +K
Sbjct: 112 SAVFHGTRLALPGMRAR---------NWGR--IINIASVHGLVGSTGKA---AYVAAKHG 157
Query: 178 LNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
+ T+ + ++ + A+ PGWV T +
Sbjct: 158 VVGLTKVVGLETATSNVTCNAICPGWVLTPL 188
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274 | Back alignment and structure |
|---|
Score = 72.6 bits (179), Expect = 2e-15
Identities = 37/221 (16%), Positives = 73/221 (33%), Gaps = 39/221 (17%)
Query: 2 KSILITGCNRGLGL---------GMIKVLVGLGNNQPAHIFATCRNKDKAVELL---ALA 49
K++ ITG +RG+GL G + + T + AV LA
Sbjct: 7 KTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLA 66
Query: 50 QQHSNLHVIELDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQ 108
++ D+ + + + ++ V G +++LVNNA ++
Sbjct: 67 --------LKCDIREEDQVRAA----VAATVDTFGGIDILVNNASAI-WLRGTLDTPMKR 113
Query: 109 MTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGF 168
VN + + LP L + + I+ ++ + G
Sbjct: 114 FDLMQQVNARGSFVCAQACLPHLLQ-----------APNPHILTLAPPPS-LNPAWWGAH 161
Query: 169 HPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGW-VKTDM 208
Y +K ++ T L+ + + A+ P + TD
Sbjct: 162 TGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDA 202
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270 | Back alignment and structure |
|---|
Score = 72.2 bits (178), Expect = 3e-15
Identities = 56/213 (26%), Positives = 94/213 (44%), Gaps = 33/213 (15%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIEL 60
+ ++TG +RG+G + L G A + T + A + A Q L
Sbjct: 29 QVAIVTGASRGIGRAIALELARRG----AMVIGTATTEAGAEGIGAAFKQAGLEGRGAVL 84
Query: 61 DVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLL---KPEQMTDHFLVN 116
+V D + + + +K+ G LNVLVNNAGI T+ L K ++ N
Sbjct: 85 NVNDATAVDAL----VESTLKEFGALNVLVNNAGI----TQDQLAMRMKDDEWDAVIDTN 136
Query: 117 VTAPLMLTKTML-PLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSK 175
+ A L++ +L P++K G IVN++S++GS + Q Y +K
Sbjct: 137 LKAVFRLSRAVLRPMMKARG--------GR----IVNITSVVGSAGNPGQVN---YAAAK 181
Query: 176 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
A + TR+L+ ++ I + PG++ TDM
Sbjct: 182 AGVAGMTRALAREIGSRGITVNCVAPGFIDTDM 214
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257 | Back alignment and structure |
|---|
Score = 71.8 bits (177), Expect = 4e-15
Identities = 39/219 (17%), Positives = 82/219 (37%), Gaps = 35/219 (15%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIEL 60
K ++ITG + G+G GM G A + T R K+K E + Q + +++
Sbjct: 7 KVVIITGGSSGMGKGMATRFAKEG----ARVVITGRTKEKLEEAKLEIEQFPGQILTVQM 62
Query: 61 DVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDH-----FL 114
DV + Q + I + + G +++L+NNA + E ++ +
Sbjct: 63 DVRNTDDIQKM----IEQIDEKFGRIDILINNAAG----NFICPA--EDLSVNGWNSVIN 112
Query: 115 VNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCS 174
+ + ++ + + + I+N+ + G +
Sbjct: 113 IVLNGTFYCSQAIGKYWIEKGI----------KGNIINMVATYAWD---AGPGVIHSAAA 159
Query: 175 KAALNAATRSLSIDLKGDK-IIATAMHPGWVKTDMGGSN 212
KA + A T++L+++ I A+ PG ++ G
Sbjct: 160 KAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADK 198
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263 | Back alignment and structure |
|---|
Score = 71.4 bits (176), Expect = 4e-15
Identities = 43/213 (20%), Positives = 84/213 (39%), Gaps = 39/213 (18%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K+IL+TG G+G + + G A + A R + E A+A + + D
Sbjct: 7 KTILVTGAASGIGRAALDLFAREG----ASLVAVDREERLLAE--AVAALEAEAIAVVAD 60
Query: 62 VTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLL---KPEQMTDHFLVNV 117
V+D + V ++ +++ G L+ + + AG+ L E VN+
Sbjct: 61 VSDPKAVEAV----FAEALEEFGRLHGVAHFAGV----AHSALSWNLPLEAWEKVLRVNL 112
Query: 118 TAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSI--MGSIEDNTQGGFHPYRCSK 175
T ++ + +L++ GS +V S+ +G+ G Y K
Sbjct: 113 TGSFLVARKAGEVLEEG---------GS----LVLTGSVAGLGAF------GLAHYAAGK 153
Query: 176 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
+ R+L+++L + + PG ++T M
Sbjct: 154 LGVVGLARTLALELARKGVRVNVLLPGLIQTPM 186
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277 | Back alignment and structure |
|---|
Score = 71.5 bits (176), Expect = 6e-15
Identities = 54/215 (25%), Positives = 87/215 (40%), Gaps = 35/215 (16%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIEL 60
+ L+TG G+GL + + L G +F R ++ L L +
Sbjct: 23 EVALVTGATSGIGLEIARRLGKEG----LRVFVCARGEEGLRTTLKELREAGVEADGRTC 78
Query: 61 DVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLL---KPEQMTDHFLVN 116
DV + + + ++ VV+ G ++VLVNNAG G E D N
Sbjct: 79 DVRSVPEIEAL----VAAVVERYGPVDVLVNNAGR----PGGGATAELADELWLDVVETN 130
Query: 117 VTAPLMLTKTMLPL---LKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRC 173
+T +TK +L L++ G+ R IVN++S G PY
Sbjct: 131 LTGVFRVTKQVLKAGGMLER----------GTGR--IVNIASTGGKQGVVHAA---PYSA 175
Query: 174 SKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
SK + T++L ++L I A+ PG+V+T M
Sbjct: 176 SKHGVVGFTKALGLELARTGITVNAVCPGFVETPM 210
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247 | Back alignment and structure |
|---|
Score = 71.0 bits (175), Expect = 6e-15
Identities = 49/212 (23%), Positives = 82/212 (38%), Gaps = 42/212 (19%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
+S+L+TG NRG+GL + + L G + T R L +E+D
Sbjct: 16 RSVLVTGGNRGIGLAIAQRLAADG----HKVAVTHRGSGAPKGLFG----------VEVD 61
Query: 62 VTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLL---KPEQMTDHFLVNV 117
VTD + V + QG + VLV+NAG+ + L E+ N+
Sbjct: 62 VTDSDAVDRA----FTAVEEHQGPVEVLVSNAGL----SADAFLMRMTEEKFEKVINANL 113
Query: 118 TAPLMLTKTML-PLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKA 176
T + + + + G ++ + S+ G Q Y SKA
Sbjct: 114 TGAFRVAQRASRSMQRNKF--------GR----MIFIGSVSGLWGIGNQAN---YAASKA 158
Query: 177 ALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
+ RS++ +L + A + PG++ TDM
Sbjct: 159 GVIGMARSIARELSKANVTANVVAPGYIDTDM 190
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248 | Back alignment and structure |
|---|
Score = 71.0 bits (175), Expect = 7e-15
Identities = 56/212 (26%), Positives = 102/212 (48%), Gaps = 34/212 (16%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K L+TG +RG+G + ++L G A + T ++ A + N + L+
Sbjct: 10 KVALVTGASRGIGKAIAELLAERG----AKVIGTATSESGAQAISDYLG--DNGKGMALN 63
Query: 62 VTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLL---KPEQMTDHFLVNV 117
VT+ + V + + + G +++LVNNAGI TR LL K E+ +D N+
Sbjct: 64 VTNPESIEAV----LKAITDEFGGVDILVNNAGI----TRDNLLMRMKEEEWSDIMETNL 115
Query: 118 TAPLMLTKTML-PLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKA 176
T+ L+K +L ++KK G I+NV S++G++ + Q Y +KA
Sbjct: 116 TSIFRLSKAVLRGMMKKRQ--------GR----IINVGSVVGTMGNAGQAN---YAAAKA 160
Query: 177 ALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
+ T+S++ ++ + + PG+++TDM
Sbjct: 161 GVIGFTKSMAREVASRGVTVNTVAPGFIETDM 192
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253 | Back alignment and structure |
|---|
Score = 71.0 bits (175), Expect = 7e-15
Identities = 54/212 (25%), Positives = 88/212 (41%), Gaps = 42/212 (19%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
+S+L+TG NRG+GL + + G + T R+ + LA ++ D
Sbjct: 22 RSVLVTGGNRGIGLAIARAFADAG----DKVAITYRSGEPPEGFLA----------VKCD 67
Query: 62 VTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLL---KPEQMTDHFLVNV 117
+TD + + ++ + G + VL+ NAG+ T+ LL E T N+
Sbjct: 68 ITDTEQVEQA----YKEIEETHGPVEVLIANAGV----TKDQLLMRMSEEDFTSVVETNL 119
Query: 118 TAPLMLTKTML-PLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKA 176
T + K +L+ G +V +SS++G + Q Y SKA
Sbjct: 120 TGTFRVVKRANRAMLRAKK--------GR----VVLISSVVGLLGSAGQAN---YAASKA 164
Query: 177 ALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
L RSL+ +L I + PG+V TDM
Sbjct: 165 GLVGFARSLARELGSRNITFNVVAPGFVDTDM 196
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245 | Back alignment and structure |
|---|
Score = 70.6 bits (174), Expect = 7e-15
Identities = 54/216 (25%), Positives = 94/216 (43%), Gaps = 35/216 (16%)
Query: 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHI-FATCRNKDKAVELLAL--AQQHSNLHV 57
M+ LITG +RG+G + L G + +N++KA E+ + + V
Sbjct: 1 MRKALITGASRGIGRAIALRLAEDG----FALAIHYGQNREKAEEVAEEARRRGSPLVAV 56
Query: 58 IELDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLL---KPEQMTDHF 113
+ ++ + + + + G L+ LVNNAGI TR LL K E
Sbjct: 57 LGANLLEAEAATAL----VHQAAEVLGGLDTLVNNAGI----TRDTLLVRMKDEDWEAVL 108
Query: 114 LVNVTAPLMLTKTML-PLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYR 172
N++A T+ + ++K G IVN++S++G + + Q Y
Sbjct: 109 EANLSAVFRTTREAVKLMMKARF--------GR----IVNITSVVGILGNPGQAN---YV 153
Query: 173 CSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
SKA L TR+++ + I A+ PG+++T+M
Sbjct: 154 ASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEM 189
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299 | Back alignment and structure |
|---|
Score = 70.7 bits (174), Expect = 1e-14
Identities = 47/217 (21%), Positives = 78/217 (35%), Gaps = 27/217 (12%)
Query: 2 KSILITGCNRGLGLGM--------IKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQH- 52
K ITG RG G ++ Q + D E + +
Sbjct: 29 KVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALG 88
Query: 53 SNLHVIELDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTD 111
+ ++DV DF Q + D V G L++++ NA +A++ TRL + P+ D
Sbjct: 89 RRIIASQVDVRDFDAMQAA----VDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRD 144
Query: 112 HFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPY 171
VN+ + + +P + +IV SSI G Y
Sbjct: 145 MIDVNLNGAWITARVAIPHIMAGKRG----------GSIVFTSSIGGLR---GAENIGNY 191
Query: 172 RCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
SK L+ R+++++L I + P V T M
Sbjct: 192 IASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPM 228
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280 | Back alignment and structure |
|---|
Score = 70.3 bits (173), Expect = 1e-14
Identities = 56/230 (24%), Positives = 91/230 (39%), Gaps = 29/230 (12%)
Query: 2 KSILITGCNRGLGL---------GMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQH 52
+ ITG RG G G + + A + + + E L +
Sbjct: 16 RVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQ 75
Query: 53 -SNLHVIELDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMT 110
LDV D + +++ ++D ++ G L+V+V NAG+ + + R+ L EQ
Sbjct: 76 GRKALTRVLDVRDDAALREL----VADGMEQFGRLDVVVANAGVLS-WGRVWELTDEQWD 130
Query: 111 DHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHP 170
VN+T + +P + +A +IV VSS G G
Sbjct: 131 TVIGVNLTGTWRTLRATVPAMIEAGNG----------GSIVVVSSSAGLK---ATPGNGH 177
Query: 171 YRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAA 220
Y SK L A T +L+I+L I ++HP V+T M A +E+ A
Sbjct: 178 YSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFAR 227
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244 | Back alignment and structure |
|---|
Score = 69.8 bits (172), Expect = 1e-14
Identities = 46/214 (21%), Positives = 89/214 (41%), Gaps = 34/214 (15%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHI-FATCRNKDKAVELLA-LAQQHSNLHVIE 59
+++TG +RG+G + L G + R+ A E+ +
Sbjct: 2 PVVVVTGASRGIGKAIALSLGKAG----CKVLVNYARSAKAAEEVSKQIEAYGGQAITFG 57
Query: 60 LDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLL---KPEQMTDHFLV 115
DV+ + + + + + G ++V+VNNAGI TR LL K Q + +
Sbjct: 58 GDVSKEADVEAM----MKTAIDAWGTIDVVVNNAGI----TRDTLLIRMKKSQWDEVIDL 109
Query: 116 NVTAPLMLTKTML-PLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCS 174
N+T + T+ ++KK G I+N++S++G I + Q Y +
Sbjct: 110 NLTGVFLCTQAATKIMMKKRK--------GR----IINIASVVGLIGNIGQAN---YAAA 154
Query: 175 KAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
KA + +++ + + I + PG++ +DM
Sbjct: 155 KAGVIGFSKTAAREGASRNINVNVVCPGFIASDM 188
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303 | Back alignment and structure |
|---|
Score = 70.8 bits (174), Expect = 1e-14
Identities = 38/239 (15%), Positives = 79/239 (33%), Gaps = 41/239 (17%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNL------ 55
+ ++TG G+G ++K L+ LG +++ R ++ Q +
Sbjct: 19 QVAIVTGGATGIGKAIVKELLELG----SNVVIASRKLERLKSAADELQANLPPTKQARV 74
Query: 56 HVIELDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDH-- 112
I+ ++ + + ++ + + G +N LVNN G L E ++
Sbjct: 75 IPIQCNIRNEEEVNNL----VKSTLDTFGKINFLVNNGGG----QFLSPA--EHISSKGW 124
Query: 113 ---FLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFH 169
N+T + K + K +IVN+
Sbjct: 125 HAVLETNLTGTFYMCKAVYSSWMKEH-----------GGSIVNIIVPTK----AGFPLAV 169
Query: 170 PYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFI 228
++A + T+SL+++ I + PG + + N + G Q I
Sbjct: 170 HSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKI 228
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278 | Back alignment and structure |
|---|
Score = 70.3 bits (173), Expect = 2e-14
Identities = 52/252 (20%), Positives = 85/252 (33%), Gaps = 32/252 (12%)
Query: 2 KSILITGCNRGLGL---------GMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQH 52
K ITG RG G G ++ +Q A + ++ + L +
Sbjct: 14 KVAFITGAARGQGRAHAVRLAADGA-DIIAVDLCDQIASVPYPLATPEELAATVKLVEDI 72
Query: 53 -SNLHVIELDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMT 110
S + + DV D + + + G L+++V NAGI + +
Sbjct: 73 GSRIVARQADVRDRESLSAA----LQAGLDELGRLDIVVANAGI----APMSA-GDDGWH 123
Query: 111 DHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI-EDNTQGGFH 169
D VN+T K +P L K + +IV +SS G + G
Sbjct: 124 DVIDVNLTGVYHTIKVAIPTLVKQG----------TGGSIVLISSSAGLAGVGSADPGSV 173
Query: 170 PYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQ 229
Y +K + R + L G I ++HP V+T M + E A A
Sbjct: 174 GYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPG 233
Query: 230 SLGEAHNGGFFE 241
++G A
Sbjct: 234 AMGNAMPVEVLA 245
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269 | Back alignment and structure |
|---|
Score = 69.9 bits (172), Expect = 2e-14
Identities = 54/214 (25%), Positives = 99/214 (46%), Gaps = 34/214 (15%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHI-FATCRNKDKAVELLA-LAQQHSNLHVIE 59
+ L+TG +RG+G + L G A + + A E++A +A ++
Sbjct: 29 RIALVTGASRGIGRAIALELAAAG----AKVAVNYASSAGAADEVVAAIAAAGGEAFAVK 84
Query: 60 LDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLL---KPEQMTDHFLV 115
DV+ S+ + + + V++ G L+VLVNNAGI TR LL K + +
Sbjct: 85 ADVSQESEVEAL----FAAVIERWGRLDVLVNNAGI----TRDTLLLRMKRDDWQSVLDL 136
Query: 116 NVTAPLMLTKTML-PLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCS 174
N+ + ++ +LK+ S G I+N++S++G + + Q Y +
Sbjct: 137 NLGGVFLCSRAAAKIMLKQRS--------GR----IINIASVVGEMGNPGQAN---YSAA 181
Query: 175 KAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
KA + T++++ +L I A+ PG++ TDM
Sbjct: 182 KAGVIGLTKTVAKELASRGITVNAVAPGFIATDM 215
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279 | Back alignment and structure |
|---|
Score = 70.0 bits (172), Expect = 2e-14
Identities = 46/212 (21%), Positives = 78/212 (36%), Gaps = 35/212 (16%)
Query: 5 LITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIELDVT 63
+TG + G+GL + + L G ++ R+ + L ++ DVT
Sbjct: 28 FVTGVSSGIGLAVARTLAARG----IAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVT 83
Query: 64 DFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLL---KPEQMTDHFLVNVTA 119
+ ++ V+ G + +LVN+AG G D N+T
Sbjct: 84 STDEVHAA----VAAAVERFGPIGILVNSAGR----NGGGETADLDDALWADVLDTNLTG 135
Query: 120 PLMLTKTMLPL---LKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKA 176
+T+ +L + G R IVN++S G PY SK
Sbjct: 136 VFRVTREVLRAGGMREA----------GWGR--IVNIASTGGKQGVMYAA---PYTASKH 180
Query: 177 ALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
+ T+S+ +L I A+ PG+V+T M
Sbjct: 181 GVVGFTKSVGFELAKTGITVNAVCPGYVETPM 212
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246 | Back alignment and structure |
|---|
Score = 69.0 bits (170), Expect = 3e-14
Identities = 57/214 (26%), Positives = 101/214 (47%), Gaps = 34/214 (15%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHI-FATCRNKDKAVELLA-LAQQHSNLHVIE 59
KS L+TG +RG+G + L G ++ +K+KA ++ + + + I+
Sbjct: 5 KSALVTGASRGIGRSIALQLAEEG----YNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQ 60
Query: 60 LDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLL---KPEQMTDHFLV 115
+V D + + + I +VV G L+VLVNNAGI TR LL K ++ D
Sbjct: 61 ANVADADEVKAM----IKEVVSQFGSLDVLVNNAGI----TRDNLLMRMKEQEWDDVIDT 112
Query: 116 NVTAPLMLTKTML-PLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCS 174
N+ + +L++ S G+ I+N+SS++G++ + Q Y +
Sbjct: 113 NLKGVFNCIQKATPQMLRQRS--------GA----IINLSSVVGAVGNPGQAN---YVAT 157
Query: 175 KAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
KA + T+S + +L I A+ PG++ +DM
Sbjct: 158 KAGVIGLTKSAARELASRGITVNAVAPGFIVSDM 191
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246 | Back alignment and structure |
|---|
Score = 69.0 bits (170), Expect = 3e-14
Identities = 52/214 (24%), Positives = 96/214 (44%), Gaps = 34/214 (15%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHI-FATCRNKDKAVELLA-LAQQHSNLHVIE 59
K L+TG +RG+G + L G A++ N+ KA E++ + + S+ +
Sbjct: 5 KVALVTGASRGIGRAIAIDLAKQG----ANVVVNYAGNEQKANEVVDEIKKLGSDAIAVR 60
Query: 60 LDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLL---KPEQMTDHFLV 115
DV + ++ + V G +++LVNNAG+ T+ LL K E+
Sbjct: 61 ADVANAEDVTNM----VKQTVDVFGQVDILVNNAGV----TKDNLLMRMKEEEWDTVINT 112
Query: 116 NVTAPLMLTKTML-PLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCS 174
N+ + TK + ++++ G IVN++S++G + Q Y +
Sbjct: 113 NLKGVFLCTKAVSRFMMRQRH--------GR----IVNIASVVGVTGNPGQAN---YVAA 157
Query: 175 KAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
KA + T++ + +L I A+ PG++ TDM
Sbjct: 158 KAGVIGLTKTSAKELASRNITVNAIAPGFIATDM 191
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266 | Back alignment and structure |
|---|
Score = 69.1 bits (170), Expect = 4e-14
Identities = 45/231 (19%), Positives = 81/231 (35%), Gaps = 32/231 (13%)
Query: 2 KSILITG-CNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA--LAQQHSNLHVI 58
K +L+T G+G + + G A + + ++ + E + +
Sbjct: 23 KVVLVTAAAGTGIGSTTARRALLEG----ADVVISDYHERRLGETRDQLADLGLGRVEAV 78
Query: 59 ELDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLL---KPEQMTDHFL 114
DVT + I+ V+ G L+VLVNNAG+ + E+
Sbjct: 79 VCDVTSTEAVDAL----ITQTVEKAGRLDVLVNNAGL----GGQTPVVDMTDEEWDRVLN 130
Query: 115 VNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCS 174
V +T+ + T+ L + G IVN +S++G Q Y +
Sbjct: 131 VTLTSVMRATRAALRYFRGVDHG------G----VIVNNASVLGWR---AQHSQSHYAAA 177
Query: 175 KAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGII 225
KA + A TR +I+ + A+ P + + E+ A
Sbjct: 178 KAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSSSELLDRLASDE 228
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277 | Back alignment and structure |
|---|
Score = 68.8 bits (169), Expect = 4e-14
Identities = 34/214 (15%), Positives = 74/214 (34%), Gaps = 32/214 (14%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHV--IE 59
K ITG G+G + ++ + G H R+ + + + +
Sbjct: 28 KVAFITGGGSGIGFRIAEIFMRHG----CHTVIASRSLPRVLTAARKLAGATGRRCLPLS 83
Query: 60 LDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGL---LKPEQMTDHFLV 115
+DV + +K+ G +++L+N A L L +
Sbjct: 84 MDVRAPPAVMAA----VDQALKEFGRIDILINCAAG----NFLCPAGALSFNAFKTVMDI 135
Query: 116 NVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSK 175
+ + +++ + + IVN+++ +G+ Q +K
Sbjct: 136 DTSGTFNVSRVLYEKFFRDH-----------GGVIVNITATLGN---RGQALQVHAGSAK 181
Query: 176 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDMG 209
AA++A TR L+++ I ++ PG + G
Sbjct: 182 AAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEG 215
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264 | Back alignment and structure |
|---|
Score = 68.0 bits (167), Expect = 9e-14
Identities = 47/220 (21%), Positives = 83/220 (37%), Gaps = 38/220 (17%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA--------LAQQHS 53
L+TG G+G + L G G A + A ++ A E +
Sbjct: 8 ALALVTGAGSGIGRAVSVRLAGEG----ATVAACDLDRAAAQETVRLLGGPGSKEGPPRG 63
Query: 54 NLHVIELDVTDFSKQQDVLFKDISDVVKDQG--LNVLVNNAGIAAKFTRLGLL---KPEQ 108
N + DV++ + + + V +V+V+ AGI T+ L +
Sbjct: 64 NHAAFQADVSEARAARCL----LEQVQACFSRPPSVVVSCAGI----TQDEFLLHMSEDD 115
Query: 109 MTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGF 168
VN+ ++T+ L GS I+N+SSI+G + + Q
Sbjct: 116 WDKVIAVNLKGTFLVTQAAAQALVS------NGCRGS----IINISSIVGKVGNVGQTN- 164
Query: 169 HPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
Y SKA + T++ + +L I ++ PG++ T M
Sbjct: 165 --YAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPM 202
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247 | Back alignment and structure |
|---|
Score = 67.5 bits (166), Expect = 9e-14
Identities = 55/213 (25%), Positives = 91/213 (42%), Gaps = 32/213 (15%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIEL 60
K+ ++TG +RGLG + L +G N + N+ V +
Sbjct: 6 KTAIVTGSSRGLGKAIAWKLGNMGAN---IVLNGSPASTSLDATAEEFKAAGINVVVAKG 62
Query: 61 DVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLL---KPEQMTDHFLVN 116
DV + +++ + + G +++LVNNAGI TR L+ + D N
Sbjct: 63 DVKNPEDVENM----VKTAMDAFGRIDILVNNAGI----TRDTLMLKMSEKDWDDVLNTN 114
Query: 117 VTAPLMLTKTML-PLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSK 175
+ + + TK + +LK+ S G I+N++SI G I + Q Y SK
Sbjct: 115 LKSAYLCTKAVSKIMLKQKS--------GK----IINITSIAGIIGNAGQAN---YAASK 159
Query: 176 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
A L T+S++ + I A+ PG +KTDM
Sbjct: 160 AGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDM 192
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247 | Back alignment and structure |
|---|
Score = 67.5 bits (166), Expect = 9e-14
Identities = 43/211 (20%), Positives = 83/211 (39%), Gaps = 31/211 (14%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K+ L+TG +G+G + L G A + + N + A A A I D
Sbjct: 7 KTALVTGAAQGIGKAIAARLAADG----ATVIVSDINAEGAKA--AAASIGKKARAIAAD 60
Query: 62 VTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLL---KPEQMTDHFLVNV 117
++D + + +++ G +++LVNNA I + VN+
Sbjct: 61 ISDPGSVKAL----FAEIQALTGGIDILVNNASI----VPFVAWDDVDLDHWRKIIDVNL 112
Query: 118 TAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAA 177
T ++T+ ++ A +A G +++++S Y +K
Sbjct: 113 TGTFIVTRAGTDQMRAAGKA------GR----VISIASNTFFAGTPNMAA---YVAAKGG 159
Query: 178 LNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
+ TR+L+ +L I A A+ PG +++D
Sbjct: 160 VIGFTRALATELGKYNITANAVTPGLIESDG 190
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291 | Back alignment and structure |
|---|
Score = 68.1 bits (167), Expect = 1e-13
Identities = 44/254 (17%), Positives = 83/254 (32%), Gaps = 46/254 (18%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCR-NKDKAVELLA--LAQQHSNLHVI 58
L+TG + LG + + L G + + +A L A A++ ++ +
Sbjct: 10 PVALVTGAAKRLGRSIAEGLHAEG----YAVCLHYHRSAAEANALSATLNARRPNSAITV 65
Query: 59 ELDVTDFSKQQDVLFKD-------------ISDVVKDQG-LNVLVNNAGIAAKFTRLGLL 104
+ D+++ + ++ G +VLVNNA T L
Sbjct: 66 QADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASS-FYPTPLLRN 124
Query: 105 KPEQ--------------MTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAI 150
+ D F N AP L K + + + +I
Sbjct: 125 DEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRG-----TNYSI 179
Query: 151 VNVSSIMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGG 210
+N+ M + G+ Y +K AL TRS +++L +I + PG + +
Sbjct: 180 INMVDAMTNQ---PLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGL--SVLVD 234
Query: 211 SNAPLEVGAATAGI 224
P + +
Sbjct: 235 DMPPAVWEGHRSKV 248
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281 | Back alignment and structure |
|---|
Score = 67.7 bits (166), Expect = 1e-13
Identities = 43/239 (17%), Positives = 75/239 (31%), Gaps = 26/239 (10%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
S +++G GLG ++ L G + +K L + + + +
Sbjct: 31 ASAIVSGGAGGLGEATVRRLHADG----LGVVIADLAAEKGKALAD--ELGNRAEFVSTN 84
Query: 62 VTDFSKQQDVLFKDISDVVKDQG--LNVLVNNAGIAAKFTRLGLLKPEQMTDHFL----V 115
VT + + G +V + G + F +
Sbjct: 85 VTSEDSVLAAI-----EAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDL 139
Query: 116 NVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSK 175
+ + + + + A R A+V +SI G Q G Y +K
Sbjct: 140 YLNGTYNVARLVAASIAAA-----EPRENGERGALVLTASIAGY---EGQIGQTAYAAAK 191
Query: 176 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQSLGEA 234
A + T + + DL I + PG +KT + S E A A I F + LG
Sbjct: 192 AGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMES-VGEEALAKFAANIPFPKRLGTP 249
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269 | Back alignment and structure |
|---|
Score = 67.2 bits (165), Expect = 2e-13
Identities = 46/213 (21%), Positives = 79/213 (37%), Gaps = 32/213 (15%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATC-RNKDKAVELLALAQQH-SNLHVIE 59
+ +TG GLG + + L G + + D L + +
Sbjct: 26 RVAFVTGGMGGLGAAISRRLHDAG----MAVAVSHSERNDHVSTWLMHERDAGRDFKAYA 81
Query: 60 LDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLL---KPEQMTDHFLV 115
+DV DF + V+ D G ++VL+NNAGI TR
Sbjct: 82 VDVADFESCERC----AEKVLADFGKVDVLINNAGI----TRDATFMKMTKGDWDAVMRT 133
Query: 116 NVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSK 175
++ A +TK + + + R IVN+ S+ GS Q Y +K
Sbjct: 134 DLDAMFNVTKQFIAGMVER---------RFGR--IVNIGSVNGSRGAFGQAN---YASAK 179
Query: 176 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
A ++ T++L+++ I + PG++ T M
Sbjct: 180 AGIHGFTKTLALETAKRGITVNTVSPGYLATAM 212
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328 | Back alignment and structure |
|---|
Score = 67.5 bits (165), Expect = 2e-13
Identities = 43/238 (18%), Positives = 80/238 (33%), Gaps = 46/238 (19%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCR-NKDKAVELLA--LAQQHSNLHVI 58
L+TG + LG + + L G + + +A L A A++ ++ +
Sbjct: 47 PVALVTGAAKRLGRSIAEGLHAEG----YAVCLHYHRSAAEANALSATLNARRPNSAITV 102
Query: 59 ELDVTDFSKQQDVLFKD-------------ISDVVKDQG-LNVLVNNAGIAAKFTRLGLL 104
+ D+++ + ++ G +VLVNNA T L
Sbjct: 103 QADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASS-FYPTPLLRN 161
Query: 105 KPEQ--------------MTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAI 150
+ D F N AP L K + + + +I
Sbjct: 162 DEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRG-----TNYSI 216
Query: 151 VNVSSIMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
+N+ M + G+ Y +K AL TRS +++L +I + PG + +
Sbjct: 217 INMVDAMTNQ---PLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGL--SVL 269
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256 | Back alignment and structure |
|---|
Score = 66.4 bits (163), Expect = 3e-13
Identities = 50/213 (23%), Positives = 88/213 (41%), Gaps = 32/213 (15%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCR-NKDKAVELLALAQQH-SNLHVIE 59
+ +TG G+G + + L G + A C N + V+ L + + + E
Sbjct: 14 RIAYVTGGMGGIGTSICQRLHKDG----FRVVAGCGPNSPRRVKWLEDQKALGFDFYASE 69
Query: 60 LDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLL---KPEQMTDHFLV 115
+V D+ + V + G ++VLVNNAGI TR + E
Sbjct: 70 GNVGDWDSTKQA----FDKVKAEVGEIDVLVNNAGI----TRDVVFRKMTREDWQAVIDT 121
Query: 116 NVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSK 175
N+T+ +TK ++ + + G R I+N+SS+ G Q Y +K
Sbjct: 122 NLTSLFNVTKQVIDGMVER---------GWGR--IINISSVNGQKGQFGQTN---YSTAK 167
Query: 176 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
A ++ T SL+ ++ + + PG++ TDM
Sbjct: 168 AGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDM 200
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257 | Back alignment and structure |
|---|
Score = 66.1 bits (162), Expect = 4e-13
Identities = 51/237 (21%), Positives = 85/237 (35%), Gaps = 23/237 (9%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
+ ++TG + GLG + ++L G A + E A + + + D
Sbjct: 8 RVFIVTGASSGLGAAVTRMLAQEG----ATVLGLDLKPPAGEEPAA--ELGAAVRFRNAD 61
Query: 62 VTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAK---FTRLGLLKPEQMTDHFLVNV 117
VT+ + ++ ++ G ++ LVN AG A R G + VN+
Sbjct: 62 VTNEADATAA----LAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNL 117
Query: 118 TAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAA 177
+ + ++ + R IVN +SI + Q G Y SK
Sbjct: 118 IGTFNMIRLAAEVM-----SQGEPDADGERGVIVNTASIAAF---DGQIGQAAYAASKGG 169
Query: 178 LNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQSLGEA 234
+ A T + +L I + PG T M P +V A A + F LG A
Sbjct: 170 VAALTLPAARELARFGIRVVTIAPGIFDTPMMAG-MPQDVQDALAASVPFPPRLGRA 225
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257 | Back alignment and structure |
|---|
Score = 65.7 bits (161), Expect = 6e-13
Identities = 50/237 (21%), Positives = 81/237 (34%), Gaps = 25/237 (10%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
++TG GLGL K L+ G A + + V L D
Sbjct: 10 AVAVVTGGASGLGLATTKRLLDAG----AQVVVLDIRGEDVVADLG-----DRARFAAAD 60
Query: 62 VTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAK---FTRLGLLKPEQMTDHFLVNV 117
VTD + L D+ + G L ++VN AG +R G+ +N+
Sbjct: 61 VTDEAAVASAL-----DLAETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINL 115
Query: 118 TAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAA 177
+ + + ++ P R I+N +S+ + Q G Y SK
Sbjct: 116 VGSFNVLRLAAERI---AKTEPVGPNAEERGVIINTASVAAF---DGQIGQAAYSASKGG 169
Query: 178 LNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQSLGEA 234
+ T ++ DL +I + PG T + S P E A+ + LG
Sbjct: 170 VVGMTLPIARDLASHRIRVMTIAPGLFDTPLLAS-LPEEARASLGKQVPHPSRLGNP 225
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265 | Back alignment and structure |
|---|
Score = 65.0 bits (159), Expect = 1e-12
Identities = 55/239 (23%), Positives = 82/239 (34%), Gaps = 25/239 (10%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
+ITG GLGL + LVG G A + +N D
Sbjct: 13 LVAVITGGASGLGLATAERLVGQG----ASAVLLDLPNSGGEAQAK--KLGNNCVFAPAD 66
Query: 62 VTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMT-DHFL----V 115
VT Q ++ G ++V VN AGIA L K + T + F V
Sbjct: 67 VTSEKDVQTA----LALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDV 122
Query: 116 NVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSK 175
N+ + + + + + G R I+N +S+ Q G Y SK
Sbjct: 123 NLMGTFNVIRLVAGEMGQN-----EPDQGGQRGVIINTASVAAF---EGQVGQAAYSASK 174
Query: 176 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQSLGEA 234
+ T ++ DL I + PG T + S P +V A + F LG+
Sbjct: 175 GGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTS-LPEKVCNFLASQVPFPSRLGDP 232
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317 | Back alignment and structure |
|---|
Score = 65.0 bits (159), Expect = 2e-12
Identities = 46/217 (21%), Positives = 86/217 (39%), Gaps = 34/217 (15%)
Query: 5 LITGCNRGLGLGMIKVLVGLG--------NNQPAHIFATCRNKDKAVELLALAQQH-SNL 55
ITG RG G L G Q ++ + ++ E + L ++ +
Sbjct: 50 FITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRI 109
Query: 56 HVIELDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLL---KPEQMTD 111
+ DV D + Q V + + + + G +++LV+N GI + G + +Q +D
Sbjct: 110 IARQADVRDLASLQAV----VDEALAEFGHIDILVSNVGI----SNQGEVVSLTDQQWSD 161
Query: 112 HFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPY 171
N+ + +LP + + + GS ++ VSS +G G Y
Sbjct: 162 ILQTNLIGAWHACRAVLPSMIERGQG------GS----VIFVSSTVGLR---GAPGQSHY 208
Query: 172 RCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
SK + SL+ ++ I +++PG V T+M
Sbjct: 209 AASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEM 245
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242 | Back alignment and structure |
|---|
Score = 63.8 bits (156), Expect = 2e-12
Identities = 53/237 (22%), Positives = 84/237 (35%), Gaps = 33/237 (13%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
+S L+TG GLG L G V +L L ++ +L +E D
Sbjct: 3 RSALVTGGASGLGRAAALALKARGYR---------------VVVLDLRREGEDLIYVEGD 47
Query: 62 VTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKP---EQMTDHFLVNV 117
VT + + +++ L +V+ AG+ LG P E VN+
Sbjct: 48 VTREEDVRRAV-----ARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNL 102
Query: 118 TAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAA 177
+ + +++ N G R IVN +S+ Q G Y SK
Sbjct: 103 LGTFNVLRLAAWAMRE----NPPDAEGQ-RGVIVNTASVAAF---EGQIGQAAYAASKGG 154
Query: 178 LNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQSLGEA 234
+ A T + +L G I + PG T + P + A+ A + F LG
Sbjct: 155 VVALTLPAARELAGWGIRVVTVAPGLFDTPLLQG-LPEKAKASLAAQVPFPPRLGRP 210
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281 | Back alignment and structure |
|---|
Score = 64.1 bits (157), Expect = 3e-12
Identities = 35/157 (22%), Positives = 61/157 (38%), Gaps = 26/157 (16%)
Query: 56 HVIELDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLL---KPEQMTD 111
++DV D + + +++ G +++ + NAGI + + LL + Q +
Sbjct: 74 ISAKVDVKDRAALESF----VAEAEDTLGGIDIAITNAGI----STIALLPEVESAQWDE 125
Query: 112 HFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPY 171
N+T + P + K R IV VSS++G Y
Sbjct: 126 VIGTNLTGTFNTIAAVAPGMIKR---------NYGR--IVTVSSMLGHS---ANFAQASY 171
Query: 172 RCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
SK + T+ + DL G I A+ PG ++T M
Sbjct: 172 VSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPM 208
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245 | Back alignment and structure |
|---|
Score = 63.3 bits (155), Expect = 3e-12
Identities = 45/213 (21%), Positives = 82/213 (38%), Gaps = 39/213 (18%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K++LITG G+G +++ G A + A + E H + +D
Sbjct: 6 KAVLITGAAHGIGRATLELFAKEG----ARLVACDIEEGPLREAAEAVGAH----PVVMD 57
Query: 62 VTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLL---KPEQMTDHFLVNV 117
V D + + ++ + G L+ +V+ AGI TR E VN+
Sbjct: 58 VADPASVERG----FAEALAHLGRLDGVVHYAGI----TRDNFHWKMPLEDWELVLRVNL 109
Query: 118 TAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSI--MGSIEDNTQGGFHPYRCSK 175
T ++ K +++ IV +S +G++ G Y S
Sbjct: 110 TGSFLVAKAASEAMREK---------NPGS--IVLTASRVYLGNL------GQANYAASM 152
Query: 176 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
A + TR+L+++L I + PG+++T M
Sbjct: 153 AGVVGLTRTLALELGRWGIRVNTLAPGFIETRM 185
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454 | Back alignment and structure |
|---|
Score = 63.5 bits (155), Expect = 7e-12
Identities = 53/213 (24%), Positives = 86/213 (40%), Gaps = 35/213 (16%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K ++TG RG+G + +V G A + A + D A E L + LD
Sbjct: 214 KVAVVTGAARGIGATIAEVFARDG----ATVVAI--DVDGAAEDLKRVADKVGGTALTLD 267
Query: 62 VTDFSKQQDVLFKDISDVVKDQG--LNVLVNNAGIAAKFTRLGLL---KPEQMTDHFLVN 116
VT + + V + G +++LVNNAGI TR LL ++ VN
Sbjct: 268 VTADDAVDKI----TAHVTEHHGGKVDILVNNAGI----TRDKLLANMDEKRWDAVIAVN 319
Query: 117 VTAPLMLTKTML-PLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSK 175
+ AP LT+ ++ G ++ +SS+ G + Q Y +K
Sbjct: 320 LLAPQRLTEGLVGNGTIGEG--------GR----VIGLSSMAGIAGNRGQTN---YATTK 364
Query: 176 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
A + +L+ L I A+ PG+++T M
Sbjct: 365 AGMIGLAEALAPVLADKGITINAVAPGFIETKM 397
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264 | Back alignment and structure |
|---|
Score = 61.0 bits (149), Expect = 3e-11
Identities = 40/216 (18%), Positives = 83/216 (38%), Gaps = 32/216 (14%)
Query: 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA--LAQQHSNLHVI 58
++ LIT +GLG + + L+ G + T + A+E + L +
Sbjct: 7 VRHALITAGTKGLGKQVTEKLLAKG----YSVTVTYHSDTTAMETMKETYKDVEERLQFV 62
Query: 59 ELDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLL---KPEQMTDHFL 114
+ DVT + + + + G ++ L+NNAG L + ++ +
Sbjct: 63 QADVTKKEDLHKI----VEEAMSHFGKIDFLINNAG--PYVFERKKLVDYEEDEWNEMIQ 116
Query: 115 VNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVS--SIMGSIEDNTQGGFHPYR 172
N+TA L K ++P+++K R I+N + + +
Sbjct: 117 GNLTAVFHLLKLVVPVMRKQ---------NFGR--IINYGFQGADSAPGWIYRSA---FA 162
Query: 173 CSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
+K L + T++++ + I A + PG + +M
Sbjct: 163 AAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEM 198
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 46.4 bits (109), Expect = 5e-06
Identities = 29/169 (17%), Positives = 55/169 (32%), Gaps = 28/169 (16%)
Query: 50 QQHSNLHVIELDVTDFSKQQDVLFKDISD----VVKDQGLNVLVNNAGIAAKFTRL-GLL 104
Q+ ++ + F D KD+ D ++ + ++ ++ + + RL L
Sbjct: 14 HQYQYKDILSVFEDAFVDNFD--CKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTL 71
Query: 105 --KPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIED 162
K E+M F+ V L + P +R I + D
Sbjct: 72 LSKQEEMVQKFVEEVLRI------NYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYN---D 122
Query: 163 NTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS 211
N F Y S+ R ++L+ K + + G + GS
Sbjct: 123 NQV--FAKYNVSRLQPYLKLRQALLELRPAKNV--LID-G-----VLGS 161
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287 | Back alignment and structure |
|---|
Score = 39.9 bits (93), Expect = 3e-04
Identities = 18/120 (15%), Positives = 38/120 (31%), Gaps = 19/120 (15%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K ++ +G+ +L G G A + R DKA + ++V +
Sbjct: 120 KKAVVLAGTGPVGMRSAALLAGEG----AEVVLCGRKLDKAQAAADSVNKRFKVNVTAAE 175
Query: 62 VTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPL 121
D + + + + +G + + I L LL + + + A
Sbjct: 176 TADDASRAEAV----------KGAHFVFTAGAIG-----LELLPQAAWQNESSIEIVADY 220
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 248 | |||
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 100.0 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 100.0 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 100.0 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 100.0 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 100.0 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 100.0 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 100.0 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 100.0 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 100.0 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 100.0 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 100.0 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 100.0 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 100.0 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 100.0 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 100.0 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 100.0 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 100.0 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 100.0 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 100.0 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 100.0 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 100.0 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 100.0 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 100.0 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 100.0 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 100.0 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 100.0 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 100.0 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 100.0 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 100.0 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 100.0 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 100.0 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 100.0 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 100.0 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 100.0 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 100.0 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 100.0 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 100.0 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 100.0 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 100.0 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 100.0 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 100.0 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 100.0 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 100.0 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 100.0 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 100.0 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 100.0 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 100.0 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 100.0 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 100.0 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 100.0 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 100.0 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 100.0 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 100.0 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 100.0 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 100.0 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 100.0 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 100.0 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 100.0 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 100.0 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 100.0 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 100.0 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 100.0 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 100.0 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 100.0 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 100.0 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 100.0 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 100.0 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 100.0 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 100.0 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 100.0 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 100.0 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 100.0 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 100.0 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 100.0 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 100.0 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 100.0 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 100.0 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 100.0 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 100.0 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 100.0 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 100.0 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 100.0 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 100.0 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 100.0 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 100.0 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 100.0 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 100.0 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 100.0 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 100.0 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 100.0 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 100.0 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 100.0 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 100.0 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 100.0 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 100.0 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 100.0 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 100.0 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 100.0 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 100.0 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 100.0 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 100.0 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 100.0 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 100.0 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 100.0 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 100.0 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 100.0 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 100.0 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 100.0 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 100.0 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 100.0 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 100.0 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 100.0 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 100.0 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 100.0 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 100.0 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 100.0 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 100.0 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 100.0 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 100.0 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 100.0 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 100.0 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 100.0 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 100.0 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 100.0 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 100.0 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 100.0 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 100.0 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 100.0 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 100.0 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 100.0 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 100.0 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 100.0 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 100.0 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 100.0 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 100.0 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 100.0 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 100.0 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 100.0 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 100.0 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 100.0 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 100.0 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 100.0 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 100.0 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 100.0 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 100.0 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 100.0 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 100.0 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 100.0 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 100.0 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 100.0 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 100.0 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 100.0 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 100.0 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 100.0 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 100.0 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 100.0 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 100.0 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 100.0 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 100.0 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 100.0 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 100.0 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 100.0 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 100.0 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 100.0 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 100.0 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 100.0 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 100.0 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 100.0 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 100.0 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 100.0 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 100.0 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 100.0 | |
| 3lt0_A | 329 | Enoyl-ACP reductase; triclosan, triclosan variant, | 100.0 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 100.0 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 100.0 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 100.0 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 100.0 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 100.0 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 100.0 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 100.0 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 100.0 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 100.0 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 100.0 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 100.0 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 100.0 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 100.0 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 100.0 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 100.0 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 100.0 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 100.0 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 100.0 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 100.0 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 100.0 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 100.0 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 100.0 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 100.0 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 100.0 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 100.0 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 100.0 | |
| 3s8m_A | 422 | Enoyl-ACP reductase; rossmann fold, oxidoreductase | 100.0 | |
| 3zu3_A | 405 | Putative reductase YPO4104/Y4119/YP_4011; oxidored | 100.0 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 100.0 | |
| 2o2s_A | 315 | Enoyl-acyl carrier reductase; enoyl reductase, tri | 100.0 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 100.0 | |
| 2ptg_A | 319 | Enoyl-acyl carrier reductase; apicomplexa, enoyl ( | 100.0 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 100.0 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 100.0 | |
| 1d7o_A | 297 | Enoyl-[acyl-carrier protein] reductase (NADH) PRE; | 100.0 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 100.0 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 100.0 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 100.0 | |
| 4eue_A | 418 | Putative reductase CA_C0462; TER, biofuel, synthet | 100.0 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 99.98 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 99.97 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 99.97 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 99.97 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 99.97 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 99.96 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 99.96 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 99.96 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 99.95 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 99.94 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 99.94 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 99.94 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 99.93 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 99.92 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 99.9 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 99.9 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 99.89 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 99.89 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 99.89 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 99.88 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 99.88 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 99.88 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 99.88 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 99.87 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 99.87 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 99.87 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 99.87 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 99.86 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 99.86 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 99.86 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 99.86 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 99.86 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 99.85 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 99.85 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 99.85 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 99.84 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 99.84 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 99.84 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 99.84 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 99.84 | |
| 4ggo_A | 401 | Trans-2-enoyl-COA reductase; rossmann fold, oxidor | 99.84 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 99.84 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 99.84 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 99.83 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 99.83 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 99.83 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 99.83 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 99.83 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 99.82 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 99.82 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 99.82 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 99.82 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 99.82 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 99.82 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 99.82 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 99.82 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 99.82 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 99.81 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 99.81 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 99.81 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 99.81 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 99.81 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 99.81 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 99.81 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 99.8 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 99.8 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 99.8 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 99.8 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 99.8 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 99.78 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 99.78 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 99.77 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 99.77 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 99.76 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 99.76 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 99.76 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 99.76 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 99.75 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 99.75 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 99.74 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 99.73 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 99.72 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 99.72 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 99.71 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 99.71 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 99.7 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 99.7 | |
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 99.69 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 99.69 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 99.68 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 99.67 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 99.64 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 99.62 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 99.62 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 99.62 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 99.58 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 99.54 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 99.51 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 99.5 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 99.47 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 99.47 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 99.38 | |
| 1lu9_A | 287 | Methylene tetrahydromethanopterin dehydrogenase; a | 99.34 | |
| 4b4o_A | 298 | Epimerase family protein SDR39U1; isomerase; HET: | 99.31 | |
| 1y7t_A | 327 | Malate dehydrogenase; NAD-dependent-MDH-NADPH comp | 99.1 | |
| 1u7z_A | 226 | Coenzyme A biosynthesis bifunctional protein coabc | 99.09 | |
| 4ina_A | 405 | Saccharopine dehydrogenase; structural genomics, P | 98.76 | |
| 3ic5_A | 118 | Putative saccharopine dehydrogenase; structural ge | 98.74 | |
| 2gk4_A | 232 | Conserved hypothetical protein; alpha-beta-alpha s | 98.74 | |
| 2o7s_A | 523 | DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat | 98.57 | |
| 3ond_A | 488 | Adenosylhomocysteinase; plant protein, enzyme-subs | 98.53 | |
| 3gxh_A | 157 | Putative phosphatase (DUF442); YP_001181608.1, str | 98.45 | |
| 2hcy_A | 347 | Alcohol dehydrogenase 1; tetramer of asymmetric di | 98.4 | |
| 1pqw_A | 198 | Polyketide synthase; rossmann fold, dimer, structu | 98.37 | |
| 1v3u_A | 333 | Leukotriene B4 12- hydroxydehydrogenase/prostaglan | 98.33 | |
| 1ff9_A | 450 | Saccharopine reductase; lysine biosynthesis, alpha | 98.32 | |
| 2axq_A | 467 | Saccharopine dehydrogenase; rossmann fold variant, | 98.22 | |
| 2eez_A | 369 | Alanine dehydrogenase; TTHA0216, structural genomi | 98.18 | |
| 1wly_A | 333 | CAAR, 2-haloacrylate reductase; NADPH-dependent ox | 98.17 | |
| 1b8p_A | 329 | Protein (malate dehydrogenase); oxidoreductase; 1. | 98.17 | |
| 1qor_A | 327 | Quinone oxidoreductase; HET: NAP; 2.20A {Escherich | 98.15 | |
| 3llv_A | 141 | Exopolyphosphatase-related protein; NAD(P)-binding | 98.14 | |
| 1nyt_A | 271 | Shikimate 5-dehydrogenase; alpha/beta domains, WID | 98.12 | |
| 2zb4_A | 357 | Prostaglandin reductase 2; rossmann fold, alternat | 98.09 | |
| 2j8z_A | 354 | Quinone oxidoreductase; medium-chain dehydrogenase | 98.06 | |
| 3tnl_A | 315 | Shikimate dehydrogenase; structural genomics, cent | 98.03 | |
| 1yb5_A | 351 | Quinone oxidoreductase; medium-chain dehydrogenase | 98.01 | |
| 2j3h_A | 345 | NADP-dependent oxidoreductase P1; double bond redu | 97.98 | |
| 2hmt_A | 144 | YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane | 97.96 | |
| 1nvt_A | 287 | Shikimate 5'-dehydrogenase; structural genomics, P | 97.94 | |
| 4b7c_A | 336 | Probable oxidoreductase; NADP cofactor, rossmann f | 97.91 | |
| 1jvb_A | 347 | NAD(H)-dependent alcohol dehydrogenase; archaeon, | 97.87 | |
| 4a0s_A | 447 | Octenoyl-COA reductase/carboxylase; oxidoreductase | 97.87 | |
| 1hye_A | 313 | L-lactate/malate dehydrogenase; nucleotide binding | 97.86 | |
| 3jyo_A | 283 | Quinate/shikimate dehydrogenase; enzyme-cofactor c | 97.85 | |
| 2eih_A | 343 | Alcohol dehydrogenase; zinc ION binding protein, s | 97.83 | |
| 1smk_A | 326 | Malate dehydrogenase, glyoxysomal; tricarboxylic c | 97.8 | |
| 3qwb_A | 334 | Probable quinone oxidoreductase; rossmann fold, qu | 97.79 | |
| 3gms_A | 340 | Putative NADPH:quinone reductase; structural genom | 97.77 | |
| 4dup_A | 353 | Quinone oxidoreductase; PSI-biology, structural ge | 97.77 | |
| 1o6z_A | 303 | MDH, malate dehydrogenase; halophilic, ION-binding | 97.76 | |
| 3jyn_A | 325 | Quinone oxidoreductase; rossmann fold, protein-NAD | 97.76 | |
| 1p77_A | 272 | Shikimate 5-dehydrogenase; NADPH, oxidoreductase; | 97.74 | |
| 4eye_A | 342 | Probable oxidoreductase; structural genomics, niai | 97.68 | |
| 3t4e_A | 312 | Quinate/shikimate dehydrogenase; structural genomi | 97.62 | |
| 3pi7_A | 349 | NADH oxidoreductase; groes-like fold, NAD(P)-bindi | 97.6 | |
| 2cdc_A | 366 | Glucose dehydrogenase glucose 1-dehydrogenase, DHG | 97.57 | |
| 3abi_A | 365 | Putative uncharacterized protein PH1688; L-lysine | 97.54 | |
| 2c0c_A | 362 | Zinc binding alcohol dehydrogenase, domain contain | 97.5 | |
| 3pwz_A | 272 | Shikimate dehydrogenase 3; alpha-beta, oxidoreduct | 97.49 | |
| 3o8q_A | 281 | Shikimate 5-dehydrogenase I alpha; structural geno | 97.49 | |
| 3krt_A | 456 | Crotonyl COA reductase; structural genomics, prote | 97.48 | |
| 1lss_A | 140 | TRK system potassium uptake protein TRKA homolog; | 97.45 | |
| 1id1_A | 153 | Putative potassium channel protein; RCK domain, E. | 97.39 | |
| 2egg_A | 297 | AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff | 97.36 | |
| 2d8a_A | 348 | PH0655, probable L-threonine 3-dehydrogenase; pyro | 97.35 | |
| 3vku_A | 326 | L-LDH, L-lactate dehydrogenase; rossmann fold, NAD | 97.35 | |
| 3pqe_A | 326 | L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas | 97.32 | |
| 1pjc_A | 361 | Protein (L-alanine dehydrogenase); oxidoreductase, | 97.32 | |
| 3gaz_A | 343 | Alcohol dehydrogenase superfamily protein; oxidore | 97.3 | |
| 1mld_A | 314 | Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D | 97.27 | |
| 5mdh_A | 333 | Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH | 97.26 | |
| 3fwz_A | 140 | Inner membrane protein YBAL; TRKA-N domain, E.coli | 97.25 | |
| 3fbg_A | 346 | Putative arginate lyase; structural genomics, unkn | 97.21 | |
| 3l4b_C | 218 | TRKA K+ channel protien TM1088B; potassium channel | 97.16 | |
| 3oj0_A | 144 | Glutr, glutamyl-tRNA reductase; structural genomic | 97.14 | |
| 1rjw_A | 339 | ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD | 97.13 | |
| 1iz0_A | 302 | Quinone oxidoreductase; APO-enzyme, riken structur | 97.12 | |
| 1yqd_A | 366 | Sinapyl alcohol dehydrogenase; lignin, monolignol, | 97.12 | |
| 1oju_A | 294 | MDH, malate dehydrogenase; hyperthermophilic, oxid | 97.12 | |
| 4aj2_A | 331 | L-lactate dehydrogenase A chain; oxidoreductase-in | 97.05 | |
| 3tum_A | 269 | Shikimate dehydrogenase family protein; rossmann-f | 97.02 | |
| 2x0j_A | 294 | Malate dehydrogenase; oxidoreductase, hyperthermop | 97.02 | |
| 2g1u_A | 155 | Hypothetical protein TM1088A; structural genomics, | 97.01 | |
| 3uog_A | 363 | Alcohol dehydrogenase; structural genomics, protei | 96.98 | |
| 3gvi_A | 324 | Malate dehydrogenase; NAD, oxidoreductase, tricarb | 96.94 | |
| 3phh_A | 269 | Shikimate dehydrogenase; shikimate pathway, helico | 96.94 | |
| 1p9o_A | 313 | Phosphopantothenoylcysteine synthetase; ligase; 2. | 96.93 | |
| 3fi9_A | 343 | Malate dehydrogenase; structural genomics, oxidore | 96.9 | |
| 2vhw_A | 377 | Alanine dehydrogenase; NAD, secreted, oxidoreducta | 96.87 | |
| 1xa0_A | 328 | Putative NADPH dependent oxidoreductases; structur | 96.84 | |
| 3c85_A | 183 | Putative glutathione-regulated potassium-efflux S | 96.84 | |
| 3m6i_A | 363 | L-arabinitol 4-dehydrogenase; medium chain dehydro | 96.83 | |
| 3p7m_A | 321 | Malate dehydrogenase; putative dehydrogenase, enzy | 96.82 | |
| 3ldh_A | 330 | Lactate dehydrogenase; oxidoreductase, CHOH donor, | 96.8 | |
| 3tl2_A | 315 | Malate dehydrogenase; center for structural genomi | 96.73 | |
| 2vn8_A | 375 | Reticulon-4-interacting protein 1; mitochondrion, | 96.73 | |
| 1ez4_A | 318 | Lactate dehydrogenase; rossmann fold, oxidoreducta | 96.66 | |
| 1ldn_A | 316 | L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA | 96.65 | |
| 1tt7_A | 330 | YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st | 96.57 | |
| 3hhp_A | 312 | Malate dehydrogenase; MDH, citric acid cycle, TCA | 96.56 | |
| 2xxj_A | 310 | L-LDH, L-lactate dehydrogenase; oxidoreductase, hy | 96.55 | |
| 4h7p_A | 345 | Malate dehydrogenase; ssgcid, structural G seattle | 96.55 | |
| 1e3j_A | 352 | NADP(H)-dependent ketose reductase; oxidoreductase | 96.55 | |
| 2z2v_A | 365 | Hypothetical protein PH1688; L-lysine dehydrogenas | 96.53 | |
| 2v6b_A | 304 | L-LDH, L-lactate dehydrogenase; oxidoreductase, ra | 96.53 | |
| 1ur5_A | 309 | Malate dehydrogenase; oxidoreductase, tricarboxyli | 96.52 | |
| 3nep_X | 314 | Malate dehydrogenase; halophIle, molecular adpatat | 96.5 | |
| 2aef_A | 234 | Calcium-gated potassium channel MTHK; rossmann fol | 96.49 | |
| 4dvj_A | 363 | Putative zinc-dependent alcohol dehydrogenase Pro; | 96.46 | |
| 1cdo_A | 374 | Alcohol dehydrogenase; oxidoreductase, oxidoreduct | 96.46 | |
| 1gu7_A | 364 | Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s | 96.45 | |
| 1pl8_A | 356 | Human sorbitol dehydrogenase; NAD, oxidoreductase; | 96.44 | |
| 2zqz_A | 326 | L-LDH, L-lactate dehydrogenase; oxidoreductase, ro | 96.41 | |
| 1jay_A | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma | 96.41 | |
| 1vj0_A | 380 | Alcohol dehydrogenase, zinc-containing; TM0436, st | 96.39 | |
| 3ip1_A | 404 | Alcohol dehydrogenase, zinc-containing; structural | 96.35 | |
| 1jw9_B | 249 | Molybdopterin biosynthesis MOEB protein; MOEB: mod | 96.34 | |
| 2jhf_A | 374 | Alcohol dehydrogenase E chain; oxidoreductase, met | 96.33 | |
| 2fzw_A | 373 | Alcohol dehydrogenase class III CHI chain; S-nitro | 96.33 | |
| 1t2d_A | 322 | LDH-P, L-lactate dehydrogenase; ternary complex, o | 96.31 | |
| 1e3i_A | 376 | Alcohol dehydrogenase, class II; HET: NAD; 2.08A { | 96.3 | |
| 1piw_A | 360 | Hypothetical zinc-type alcohol dehydrogenase- like | 96.29 | |
| 3s2e_A | 340 | Zinc-containing alcohol dehydrogenase superfamily; | 96.26 | |
| 3nx4_A | 324 | Putative oxidoreductase; csgid, structural genomic | 96.22 | |
| 2dq4_A | 343 | L-threonine 3-dehydrogenase; NAD-dependent, oxidor | 96.22 | |
| 3iup_A | 379 | Putative NADPH:quinone oxidoreductase; YP_296108.1 | 96.19 | |
| 1h2b_A | 359 | Alcohol dehydrogenase; oxidoreductase, archaea, hy | 96.17 | |
| 1y6j_A | 318 | L-lactate dehydrogenase; southeast collaboratory f | 96.17 | |
| 3gqv_A | 371 | Enoyl reductase; medium-chain reductase (MDR super | 96.17 | |
| 1kol_A | 398 | Formaldehyde dehydrogenase; oxidoreductase; HET: N | 96.17 | |
| 2ewd_A | 317 | Lactate dehydrogenase,; protein-substrate_cofactor | 96.15 | |
| 3uko_A | 378 | Alcohol dehydrogenase class-3; alcohol dehydrogena | 96.15 | |
| 1gpj_A | 404 | Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro | 96.14 | |
| 3d0o_A | 317 | L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly | 96.12 | |
| 1pzg_A | 331 | LDH, lactate dehydrogenase; apicomplexa, APAD, tet | 96.12 | |
| 2b5w_A | 357 | Glucose dehydrogenase; nucleotide binding motif, o | 96.11 | |
| 2d4a_B | 308 | Malate dehydrogenase; archaea, hyperthermophIle, o | 96.09 | |
| 1u8x_X | 472 | Maltose-6'-phosphate glucosidase; structural genom | 96.07 | |
| 2i6t_A | 303 | Ubiquitin-conjugating enzyme E2-like isoform A; L- | 96.07 | |
| 4ej6_A | 370 | Putative zinc-binding dehydrogenase; structural ge | 96.06 | |
| 3fpc_A | 352 | NADP-dependent alcohol dehydrogenase; oxydoreducta | 96.03 | |
| 1p0f_A | 373 | NADP-dependent alcohol dehydrogenase; ADH topology | 96.02 | |
| 1a5z_A | 319 | L-lactate dehydrogenase; oxidoreductase, glycolysi | 96.0 | |
| 1uuf_A | 369 | YAHK, zinc-type alcohol dehydrogenase-like protein | 95.99 | |
| 4e12_A | 283 | Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1 | 95.97 | |
| 1guz_A | 310 | Malate dehydrogenase; oxidoreductase, tricarboxyli | 95.95 | |
| 1lld_A | 319 | L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N | 95.88 | |
| 2hjr_A | 328 | Malate dehydrogenase; malaria, structural genomics | 95.88 | |
| 1f8f_A | 371 | Benzyl alcohol dehydrogenase; rossmann fold, oxido | 95.85 | |
| 1hyh_A | 309 | L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2 | 95.84 | |
| 2dph_A | 398 | Formaldehyde dismutase; dismutation of aldehydes, | 95.79 | |
| 1zsy_A | 357 | Mitochondrial 2-enoyl thioester reductase; medium- | 95.71 | |
| 3two_A | 348 | Mannitol dehydrogenase; cinnamyl-alcohol dehydroge | 95.66 | |
| 3c24_A | 286 | Putative oxidoreductase; YP_511008.1, structural g | 95.66 | |
| 1x13_A | 401 | NAD(P) transhydrogenase subunit alpha; NAD(H)-bind | 95.65 | |
| 1obb_A | 480 | Maltase, alpha-glucosidase; glycosidase, sulfinic | 95.61 | |
| 2h6e_A | 344 | ADH-4, D-arabinose 1-dehydrogenase; rossman fold, | 95.58 | |
| 3tqh_A | 321 | Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella | 95.57 | |
| 3h8v_A | 292 | Ubiquitin-like modifier-activating enzyme 5; rossm | 95.54 | |
| 3fbt_A | 282 | Chorismate mutase and shikimate 5-dehydrogenase fu | 95.53 | |
| 7mdh_A | 375 | Protein (malate dehydrogenase); chloroplastic mala | 95.43 | |
| 4g65_A | 461 | TRK system potassium uptake protein TRKA; structur | 95.41 | |
| 3tri_A | 280 | Pyrroline-5-carboxylate reductase; amino acid bios | 95.4 | |
| 3don_A | 277 | Shikimate dehydrogenase; alpha-beta structure, ros | 95.36 | |
| 2cf5_A | 357 | Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign | 95.32 | |
| 4a2c_A | 346 | Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc | 95.3 | |
| 1s6y_A | 450 | 6-phospho-beta-glucosidase; hydrolase, structural | 95.24 | |
| 3jv7_A | 345 | ADH-A; dehydrogenase, nucleotide binding, rossmann | 95.22 | |
| 1p9l_A | 245 | Dihydrodipicolinate reductase; oxidoreductase, lys | 95.21 | |
| 4eez_A | 348 | Alcohol dehydrogenase 1; site-saturation mutagenes | 95.19 | |
| 3p2y_A | 381 | Alanine dehydrogenase/pyridine nucleotide transhy; | 95.03 | |
| 2d5c_A | 263 | AROE, shikimate 5-dehydrogenase; substrate, dimer, | 94.95 | |
| 3pdu_A | 287 | 3-hydroxyisobutyrate dehydrogenase family protein; | 94.94 | |
| 4dio_A | 405 | NAD(P) transhydrogenase subunit alpha PART 1; stru | 94.94 | |
| 2pv7_A | 298 | T-protein [includes: chorismate mutase (EC 5.4.99 | 94.9 | |
| 2vns_A | 215 | Metalloreductase steap3; metal-binding, transmembr | 94.89 | |
| 2cvz_A | 289 | Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; | 94.84 | |
| 3qha_A | 296 | Putative oxidoreductase; seattle structural genomi | 94.81 | |
| 3l9w_A | 413 | Glutathione-regulated potassium-efflux system Pro | 94.81 | |
| 2h78_A | 302 | Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601 | 94.81 | |
| 1zud_1 | 251 | Adenylyltransferase THIF; thiamin, thiazole, prote | 94.8 | |
| 1l7d_A | 384 | Nicotinamide nucleotide transhydrogenase, subunit | 94.62 | |
| 3rui_A | 340 | Ubiquitin-like modifier-activating enzyme ATG7; au | 94.51 | |
| 1dih_A | 273 | Dihydrodipicolinate reductase; oxidoreductase; HET | 94.46 | |
| 4f3y_A | 272 | DHPR, dihydrodipicolinate reductase; structural ge | 94.41 | |
| 3pef_A | 287 | 6-phosphogluconate dehydrogenase, NAD-binding; gam | 94.39 | |
| 1f0y_A | 302 | HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive | 94.38 | |
| 1lnq_A | 336 | MTHK channels, potassium channel related protein; | 94.35 | |
| 3doj_A | 310 | AT3G25530, dehydrogenase-like protein; gamma-hydro | 94.33 | |
| 3g0o_A | 303 | 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine | 94.32 | |
| 2ew2_A | 316 | 2-dehydropantoate 2-reductase, putative; alpha-str | 94.32 | |
| 4huj_A | 220 | Uncharacterized protein; PSI-biology, nysgrc, stru | 94.3 | |
| 3gt0_A | 247 | Pyrroline-5-carboxylate reductase; structural geno | 94.26 | |
| 3h5n_A | 353 | MCCB protein; ubiquitin-activating enzyme, microci | 94.17 | |
| 3obb_A | 300 | Probable 3-hydroxyisobutyrate dehydrogenase; struc | 94.13 | |
| 4dll_A | 320 | 2-hydroxy-3-oxopropionate reductase; structural ge | 93.89 | |
| 2g5c_A | 281 | Prephenate dehydrogenase; TYRA, oxidoreductase; HE | 93.86 |
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-50 Score=330.84 Aligned_cols=223 Identities=23% Similarity=0.297 Sum_probs=205.7
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHH-HHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELL-ALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|++|||||++|||+++|+.|+++| ++|++++|+.++++++. ++...+.++.++++|++|+++ ++++++++.+.+
T Consensus 8 KvalVTGas~GIG~aiA~~la~~G----a~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~-v~~~~~~~~~~~ 82 (254)
T 4fn4_A 8 KVVIVTGAGSGIGRAIAKKFALND----SIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKD-VEEFVRRTFETY 82 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHH-HHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcC----CEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHH-HHHHHHHHHHHc
Confidence 899999999999999999999999 89999999999998884 444456689999999999999 999999999999
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
| ++|+||||||+..+..++.+++.|+|++.+++|+.++|+++|+++|.|.++ +.|+||++||.++..
T Consensus 83 G--~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-----------~~G~IVnisS~~g~~ 149 (254)
T 4fn4_A 83 S--RIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQ-----------GKGVIVNTASIAGIR 149 (254)
T ss_dssp S--CCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----------TCEEEEEECCGGGTC
T ss_pred C--CCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----------CCcEEEEEechhhcC
Confidence 8 699999999987655788899999999999999999999999999999987 689999999999998
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC-------------------CCchhhHH
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA-------------------PLEVGAAT 221 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~-------------------~~~~~~~~ 221 (248)
+. ++...|+++|+++.+|+++||.||+++|||||+|+||+++|||..... ..+|+|++
T Consensus 150 ~~---~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~R~g~pediA 226 (254)
T 4fn4_A 150 GG---FAGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSSRLAEPEDIA 226 (254)
T ss_dssp SS---SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHHHTTCCCCBCHHHHH
T ss_pred CC---CCChHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHHHHHhcCCCCCCCcCHHHHH
Confidence 87 788899999999999999999999999999999999999999865422 24799999
Q ss_pred HHHHHHhhhcccccccceeeeCCe
Q psy11190 222 AGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 222 ~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
..+++++++.+...+|+.+.+||.
T Consensus 227 ~~v~fLaSd~a~~iTG~~i~VDGG 250 (254)
T 4fn4_A 227 NVIVFLASDEASFVNGDAVVVDGG 250 (254)
T ss_dssp HHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHHHhCchhcCCcCCEEEeCCC
Confidence 999999999999999999999996
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-49 Score=325.88 Aligned_cols=223 Identities=22% Similarity=0.300 Sum_probs=204.8
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHH-HHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELL-ALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|++|||||++|||+++|+.|+++| ++|++.+|+.+++++.. ++...+.++.++++|++|+++ ++++++++.+.+
T Consensus 10 KvalVTGas~GIG~aia~~la~~G----a~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~-v~~~~~~~~~~~ 84 (255)
T 4g81_D 10 KTALVTGSARGLGFAYAEGLAAAG----ARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELA-IEAAFSKLDAEG 84 (255)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTT----CEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHH-HHHHHHHHHHTT
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHH-HHHHHHHHHHHC
Confidence 799999999999999999999999 99999999999988884 455556789999999999999 999999999999
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
| ++|+||||||+... .++.+++.|+|++.+++|+.++|+++|+++|.|.+++ +.|+||++||.++..
T Consensus 85 G--~iDiLVNNAG~~~~-~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~----------~~G~IVnisS~~~~~ 151 (255)
T 4g81_D 85 I--HVDILINNAGIQYR-KPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARN----------SGGKIINIGSLTSQA 151 (255)
T ss_dssp C--CCCEEEECCCCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT----------CCEEEEEECCGGGTS
T ss_pred C--CCcEEEECCCCCCC-CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcc----------CCCEEEEEeehhhcC
Confidence 8 69999999998876 8899999999999999999999999999999997653 579999999999998
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC-----------------CCCchhhHHHH
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN-----------------APLEVGAATAG 223 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~-----------------~~~~~~~~~~~ 223 (248)
+. ++...|+++|+++.+|+++||.||+++|||||+|+||+++|||.... ...+|+|++..
T Consensus 152 ~~---~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA~~ 228 (255)
T 4g81_D 152 AR---PTVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPSQRWGRPEELIGT 228 (255)
T ss_dssp BC---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTCHHHHHHHHHHSTTCSCBCGGGGHHH
T ss_pred CC---CCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCCHHHHHHHHhCCCCCCCcCHHHHHHH
Confidence 87 88899999999999999999999999999999999999999986431 13589999999
Q ss_pred HHHHhhhcccccccceeeeCCe
Q psy11190 224 IIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 224 ~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
+++++++.+...+|+.+.+||.
T Consensus 229 v~fL~S~~a~~iTG~~i~VDGG 250 (255)
T 4g81_D 229 AIFLSSKASDYINGQIIYVDGG 250 (255)
T ss_dssp HHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHhCchhCCCcCCEEEECCC
Confidence 9999999999999999999996
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-47 Score=318.56 Aligned_cols=219 Identities=28% Similarity=0.329 Sum_probs=197.2
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||++|||+++|+.|+++| ++|++++|+.++++++.+.. +.++..+++|++|.++ ++++++++.+.+|
T Consensus 30 KvalVTGas~GIG~aiA~~la~~G----a~V~i~~r~~~~l~~~~~~~--g~~~~~~~~Dv~~~~~-v~~~~~~~~~~~G 102 (273)
T 4fgs_A 30 KIAVITGATSGIGLAAAKRFVAEG----ARVFITGRRKDVLDAAIAEI--GGGAVGIQADSANLAE-LDRLYEKVKAEAG 102 (273)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHH--CTTCEEEECCTTCHHH-HHHHHHHHHHHHS
T ss_pred CEEEEeCcCCHHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHHc--CCCeEEEEecCCCHHH-HHHHHHHHHHHcC
Confidence 799999999999999999999999 89999999999888775443 5678899999999999 9999999999998
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
+||+||||||.... .++.+++.|+|++.+++|+.++|++++.++|.|++ .|+||+++|.++..+
T Consensus 103 --~iDiLVNNAG~~~~-~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~-------------~G~IInisS~~~~~~ 166 (273)
T 4fgs_A 103 --RIDVLFVNAGGGSM-LPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLAR-------------GSSVVLTGSTAGSTG 166 (273)
T ss_dssp --CEEEEEECCCCCCC-CCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE-------------EEEEEEECCGGGGSC
T ss_pred --CCCEEEECCCCCCC-CChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhh-------------CCeEEEEeehhhccC
Confidence 69999999998765 88999999999999999999999999999999964 578999999999888
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC----------------------CCchhh
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA----------------------PLEVGA 219 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~----------------------~~~~~~ 219 (248)
. ++...|+++|+|+.+|+++|+.||+++|||||+|+||+++|++..... ..+|+|
T Consensus 167 ~---~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~pee 243 (273)
T 4fgs_A 167 T---PAFSVYAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMGRVGRAEE 243 (273)
T ss_dssp C---TTCHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTTSSCBCHHH
T ss_pred C---CCchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCCCCCcCHHH
Confidence 7 888999999999999999999999999999999999999999865432 347999
Q ss_pred HHHHHHHHhhhcccccccceeeeCCee
Q psy11190 220 ATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 220 ~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
++..+++++++.+...+|+.+.+||..
T Consensus 244 iA~~v~FLaSd~a~~iTG~~i~VDGG~ 270 (273)
T 4fgs_A 244 VAAAALFLASDDSSFVTGAELFVDGGS 270 (273)
T ss_dssp HHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred HHHHHHHHhCchhcCccCCeEeECcCh
Confidence 999999999999999999999999963
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-47 Score=314.18 Aligned_cols=220 Identities=21% Similarity=0.205 Sum_probs=199.0
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||++|||+++|++|+++| ++|++++|+.++.+.+.++.+.+.++.++++|++|.++ ++++++++.+.+|
T Consensus 8 KvalVTGas~GIG~aia~~la~~G----a~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-v~~~v~~~~~~~G 82 (258)
T 4gkb_A 8 KVVIVTGGASGIGGAISMRLAEER----AIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQ-CRDAVAQTIATFG 82 (258)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT----CEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHH-HHHHHHHHHHHHS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcC----CEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHH-HHHHHHHHHHHhC
Confidence 799999999999999999999999 89999999988866666666667899999999999999 9999999999998
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+||||||+... .. .+.+.|+|++.+++|+.++|+++++++|.|+++ +|+||++||..+..+
T Consensus 83 --~iDiLVNnAGi~~~-~~-~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~------------~G~IVnisS~~~~~~ 146 (258)
T 4gkb_A 83 --RLDGLVNNAGVNDG-IG-LDAGRDAFVASLERNLIHYYAMAHYCVPHLKAT------------RGAIVNISSKTAVTG 146 (258)
T ss_dssp --CCCEEEECCCCCCC-CC-TTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------------TCEEEEECCTHHHHC
T ss_pred --CCCEEEECCCCCCC-CC-ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc------------CCeEEEEeehhhccC
Confidence 69999999998653 33 467999999999999999999999999999763 699999999999887
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC----------------------CCCchhh
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN----------------------APLEVGA 219 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~----------------------~~~~~~~ 219 (248)
. ++...|+++|+++.+|+++||.||+++|||||+|+||+++|||.+.. ...+|+|
T Consensus 147 ~---~~~~~Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plg~R~g~pee 223 (258)
T 4gkb_A 147 Q---GNTSGYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPLGRRFTTPDE 223 (258)
T ss_dssp C---SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHTTCTTTTSCBCHHH
T ss_pred C---CCchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCCCCCCcCHHH
Confidence 7 88899999999999999999999999999999999999999997542 1247999
Q ss_pred HHHHHHHHhhhcccccccceeeeCCe
Q psy11190 220 ATAGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 220 ~~~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
++..+++++++.+...+|+.+.+||.
T Consensus 224 iA~~v~fLaS~~a~~iTG~~i~VDGG 249 (258)
T 4gkb_A 224 IADTAVFLLSPRASHTTGEWLFVDGG 249 (258)
T ss_dssp HHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHHHHHhCchhcCccCCeEEECCC
Confidence 99999999999999999999999996
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-46 Score=306.20 Aligned_cols=215 Identities=20% Similarity=0.284 Sum_probs=194.0
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||++|||+++|+.|+++| ++|++++|+.++++++ .....++.++++|++|+++ ++++++++.+.+|
T Consensus 3 K~vlVTGas~GIG~aia~~la~~G----a~V~~~~~~~~~~~~~---~~~~~~~~~~~~Dv~~~~~-v~~~v~~~~~~~g 74 (247)
T 3ged_A 3 RGVIVTGGGHGIGKQICLDFLEAG----DKVCFIDIDEKRSADF---AKERPNLFYFHGDVADPLT-LKKFVEYAMEKLQ 74 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHH---HTTCTTEEEEECCTTSHHH-HHHHHHHHHHHHS
T ss_pred CEEEEecCCCHHHHHHHHHHHHCC----CEEEEEeCCHHHHHHH---HHhcCCEEEEEecCCCHHH-HHHHHHHHHHHcC
Confidence 799999999999999999999999 9999999998765544 3345688999999999999 9999999999998
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+||||||.... .++.+++.|+|++.+++|+.++|++++.++|.|.+ .+|+||++||..+..+
T Consensus 75 --~iDiLVNNAG~~~~-~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~------------~~G~IInisS~~~~~~ 139 (247)
T 3ged_A 75 --RIDVLVNNACRGSK-GILSSLLYEEFDYILSVGLKAPYELSRLCRDELIK------------NKGRIINIASTRAFQS 139 (247)
T ss_dssp --CCCEEEECCCCCCC-CGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH------------TTCEEEEECCGGGTSC
T ss_pred --CCCEEEECCCCCCC-CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh------------cCCcEEEEeecccccC
Confidence 69999999998775 88999999999999999999999999999999987 4699999999999887
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC-----------CCchhhHHHHHHHHhhh
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA-----------PLEVGAATAGIIQFIQS 230 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~-----------~~~~~~~~~~~~~~~~~ 230 (248)
. ++...|++||+++.+|+++||.||++ |||||+|+||+++|++..... ..+|+|++..+++++++
T Consensus 140 ~---~~~~~Y~asKaal~~ltk~lA~ela~-~IrVN~I~PG~i~t~~~~~~~~~~~~~~Pl~R~g~pediA~~v~fL~s~ 215 (247)
T 3ged_A 140 E---PDSEAYASAKGGIVALTHALAMSLGP-DVLVNCIAPGWINVTEQQEFTQEDCAAIPAGKVGTPKDISNMVLFLCQQ 215 (247)
T ss_dssp C---TTCHHHHHHHHHHHHHHHHHHHHHTT-TSEEEEEEECSBCCCC---CCHHHHHTSTTSSCBCHHHHHHHHHHHHHC
T ss_pred C---CCCHHHHHHHHHHHHHHHHHHHHHCC-CCEEEEEecCcCCCCCcHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHhC
Confidence 7 88899999999999999999999997 999999999999999976543 35899999999999874
Q ss_pred cccccccceeeeCCe
Q psy11190 231 LGEAHNGGFFEYTGK 245 (248)
Q Consensus 231 ~~~~~~g~~~~~~g~ 245 (248)
...+|+.+.+||.
T Consensus 216 --~~iTG~~i~VDGG 228 (247)
T 3ged_A 216 --DFITGETIIVDGG 228 (247)
T ss_dssp --SSCCSCEEEESTT
T ss_pred --CCCCCCeEEECcC
Confidence 6899999999996
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-46 Score=307.60 Aligned_cols=218 Identities=20% Similarity=0.269 Sum_probs=191.8
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||++|||+++|+.|+++| ++|++.+|+.++ +...++...+.++.++++|++|+++ ++.+++ ++
T Consensus 10 KvalVTGas~GIG~aiA~~la~~G----a~Vvi~~r~~~~-~~~~~~~~~g~~~~~~~~Dv~d~~~-v~~~~~-----~g 78 (247)
T 4hp8_A 10 RKALVTGANTGLGQAIAVGLAAAG----AEVVCAARRAPD-ETLDIIAKDGGNASALLIDFADPLA-AKDSFT-----DA 78 (247)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT----CEEEEEESSCCH-HHHHHHHHTTCCEEEEECCTTSTTT-TTTSST-----TT
T ss_pred CEEEEeCcCCHHHHHHHHHHHHcC----CEEEEEeCCcHH-HHHHHHHHhCCcEEEEEccCCCHHH-HHHHHH-----hC
Confidence 799999999999999999999999 899999998642 2223444456789999999999988 776643 23
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+||||||+... .++.+++.++|++.+++|+.++|+++|+++|.|.+++ ..|+||++||..+..+
T Consensus 79 --~iDiLVNNAGi~~~-~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g----------~~G~IVnisS~~~~~g 145 (247)
T 4hp8_A 79 --GFDILVNNAGIIRR-ADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKG----------RSGKVVNIASLLSFQG 145 (247)
T ss_dssp --CCCEEEECCCCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT----------CCEEEEEECCGGGTSC
T ss_pred --CCCEEEECCCCCCC-CCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhC----------CCcEEEEEechhhCCC
Confidence 69999999999876 8889999999999999999999999999999998762 3699999999999988
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC-----------------CCCchhhHHHHH
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN-----------------APLEVGAATAGI 224 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~-----------------~~~~~~~~~~~~ 224 (248)
. ++...|++||+++.+|+|+||.||+++|||||+|+||+++|||++.. ...+|+|++..+
T Consensus 146 ~---~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v 222 (247)
T 4hp8_A 146 G---IRVPSYTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRADAARNKAILERIPAGRWGHSEDIAGAA 222 (247)
T ss_dssp C---SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHTTCTTSSCBCTHHHHHHH
T ss_pred C---CCChHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcccCHHHHHHHHhCCCCCCCcCHHHHHHHH
Confidence 7 88899999999999999999999999999999999999999986431 135799999999
Q ss_pred HHHhhhcccccccceeeeCCee
Q psy11190 225 IQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 225 ~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
+++.++.+...+|+.+.+||.-
T Consensus 223 ~fLaSd~a~~iTG~~i~VDGG~ 244 (247)
T 4hp8_A 223 VFLSSAAADYVHGAILNVDGGW 244 (247)
T ss_dssp HHHTSGGGTTCCSCEEEESTTG
T ss_pred HHHhCchhcCCcCCeEEECccc
Confidence 9999999999999999999963
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-46 Score=305.00 Aligned_cols=211 Identities=25% Similarity=0.391 Sum_probs=185.7
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||++|||+++|++|+++| ++|++++|+.+.+++. ...++..+++|++|.++ ++++++ .++
T Consensus 12 K~alVTGas~GIG~aia~~la~~G----a~Vv~~~~~~~~~~~~-----~~~~~~~~~~Dv~~~~~-v~~~~~----~~g 77 (242)
T 4b79_A 12 QQVLVTGGSSGIGAAIAMQFAELG----AEVVALGLDADGVHAP-----RHPRIRREELDITDSQR-LQRLFE----ALP 77 (242)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT----CEEEEEESSTTSTTSC-----CCTTEEEEECCTTCHHH-HHHHHH----HCS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC----CEEEEEeCCHHHHhhh-----hcCCeEEEEecCCCHHH-HHHHHH----hcC
Confidence 899999999999999999999999 9999999998775532 24578899999999988 887764 355
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+||||||+.. ++.+++.++|++.+++|+.++|+++|.++|.|+++ .|+||++||..+..+
T Consensus 78 --~iDiLVNNAGi~~---~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~------------~G~IVnisS~~~~~~ 140 (242)
T 4b79_A 78 --RLDVLVNNAGISR---DREEYDLATFERVLRLNLSAAMLASQLARPLLAQR------------GGSILNIASMYSTFG 140 (242)
T ss_dssp --CCSEEEECCCCCC---GGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------------CEEEEEECCGGGTSC
T ss_pred --CCCEEEECCCCCC---CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc------------CCeEEEEeeccccCC
Confidence 5999999999863 45678999999999999999999999999999873 699999999999988
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC-----------------CCchhhHHHHH
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA-----------------PLEVGAATAGI 224 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~-----------------~~~~~~~~~~~ 224 (248)
. ++...|++||+++.+|+|+|+.||+++|||||+|+||+++|||..... ..+|+|++..+
T Consensus 141 ~---~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v 217 (242)
T 4b79_A 141 S---ADRPAYSASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKADVEATRRIMQRTPLARWGEAPEVASAA 217 (242)
T ss_dssp C---SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC-----CCCHHHHHHHHHTCTTCSCBCHHHHHHHH
T ss_pred C---CCCHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccCCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence 7 888999999999999999999999999999999999999999976532 34799999999
Q ss_pred HHHhhhcccccccceeeeCCee
Q psy11190 225 IQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 225 ~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
++++++.+...+|+.+.+||.-
T Consensus 218 ~fLaSd~a~~iTG~~l~VDGG~ 239 (242)
T 4b79_A 218 AFLCGPGASFVTGAVLAVDGGY 239 (242)
T ss_dssp HHHTSGGGTTCCSCEEEESTTG
T ss_pred HHHhCchhcCccCceEEECccH
Confidence 9999999999999999999963
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-45 Score=301.26 Aligned_cols=218 Identities=19% Similarity=0.314 Sum_probs=194.0
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||++|||+++|++|+++| ++|++++|+.++ ......++++|+++.++ ++.+++++.+.+|
T Consensus 12 K~alVTGas~GIG~aia~~la~~G----a~V~~~~r~~~~---------~~~~~~~~~~Dv~~~~~-v~~~~~~~~~~~G 77 (261)
T 4h15_A 12 KRALITAGTKGAGAATVSLFLELG----AQVLTTARARPE---------GLPEELFVEADLTTKEG-CAIVAEATRQRLG 77 (261)
T ss_dssp CEEEESCCSSHHHHHHHHHHHHTT----CEEEEEESSCCT---------TSCTTTEEECCTTSHHH-HHHHHHHHHHHTS
T ss_pred CEEEEeccCcHHHHHHHHHHHHcC----CEEEEEECCchh---------CCCcEEEEEcCCCCHHH-HHHHHHHHHHHcC
Confidence 899999999999999999999999 999999998653 12345678999999999 9999999999998
Q ss_pred CCCccEEEeccccCCc-cccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 82 DQGLNVLVNNAGIAAK-FTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
++|+||||||+... ..++.+++.++|++.+++|+.++++++++++|.|.++ +.|+||++||..+..
T Consensus 78 --~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-----------~~G~Iv~isS~~~~~ 144 (261)
T 4h15_A 78 --GVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVAR-----------GSGVVVHVTSIQRVL 144 (261)
T ss_dssp --SCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----------TCEEEEEECCGGGTS
T ss_pred --CCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhc-----------CCceEEEEEehhhcc
Confidence 69999999998643 3578889999999999999999999999999999987 689999999999987
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC--------------------------C--
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS--------------------------N-- 212 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~--------------------------~-- 212 (248)
+.+ .+...|+++|+|+.+|+++|+.||+++|||||+|+||+++|++... .
T Consensus 145 ~~~--~~~~~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl 222 (261)
T 4h15_A 145 PLP--ESTTAYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGIPL 222 (261)
T ss_dssp CCT--TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCCTT
T ss_pred CCC--CccHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcCCCC
Confidence 751 3578899999999999999999999999999999999999987421 1
Q ss_pred -CCCchhhHHHHHHHHhhhcccccccceeeeCCeecC
Q psy11190 213 -APLEVGAATAGIIQFIQSLGEAHNGGFFEYTGKAIK 248 (248)
Q Consensus 213 -~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~ 248 (248)
...+|+|+++.+++++++.+...||+.+.+||..++
T Consensus 223 gR~g~peevA~~v~fLaS~~a~~itG~~i~VDGG~v~ 259 (261)
T 4h15_A 223 GRPAKPEEVANLIAFLASDRAASITGAEYTIDGGTVP 259 (261)
T ss_dssp SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTCSC
T ss_pred CCCcCHHHHHHHHHHHhCchhcCccCcEEEECCcCcc
Confidence 135799999999999999999999999999998765
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-43 Score=294.53 Aligned_cols=221 Identities=19% Similarity=0.233 Sum_probs=198.1
Q ss_pred ceEEEecCCC--chhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhh--cCCceeEEeeccCCchhhhhHHHHhh
Q psy11190 2 KSILITGCNR--GLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQ--HSNLHVIELDVTDFSKQQDVLFKDIS 77 (248)
Q Consensus 2 k~~lVtGas~--giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~v~~~~~~i~ 77 (248)
|++|||||+| |||+++|++|+++| ++|++++|+.+.++++.+.... ..++.++++|+++.++ ++++++++.
T Consensus 7 K~alVTGaa~~~GIG~aiA~~la~~G----a~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-v~~~~~~~~ 81 (256)
T 4fs3_A 7 KTYVIMGIANKRSIAFGVAKVLDQLG----AKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEE-VINGFEQIG 81 (256)
T ss_dssp CEEEEECCCSTTCHHHHHHHHHHHTT----CEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHH-HHHHHHHHH
T ss_pred CEEEEECCCCCchHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHH-HHHHHHHHH
Confidence 8999999875 99999999999999 9999999999988888665544 3478999999999999 999999999
Q ss_pred hhhcCCCccEEEeccccCCc---cccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEee
Q psy11190 78 DVVKDQGLNVLVNNAGIAAK---FTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVS 154 (248)
Q Consensus 78 ~~~~~~~iD~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vs 154 (248)
+.+| ++|+||||||+... ...+.+.+.++|+..+++|+.+++.+++.+++.+.+ .|+||++|
T Consensus 82 ~~~G--~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~-------------~G~IVnis 146 (256)
T 4fs3_A 82 KDVG--NIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPE-------------GGSIVATT 146 (256)
T ss_dssp HHHC--CCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTT-------------CEEEEEEE
T ss_pred HHhC--CCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc-------------CCEEEEEe
Confidence 9998 69999999998643 234567788999999999999999999999887643 68999999
Q ss_pred cCCCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC-----------------CCch
Q psy11190 155 SIMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA-----------------PLEV 217 (248)
Q Consensus 155 s~~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~-----------------~~~~ 217 (248)
|..+..+. +++..|+++|+++.+|+++|+.||+++|||||+|+||+++|++.+... ..+|
T Consensus 147 S~~~~~~~---~~~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R~g~p 223 (256)
T 4fs3_A 147 YLGGEFAV---QNYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIKERAPLKRNVDQ 223 (256)
T ss_dssp CGGGTSCC---TTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSSCCCH
T ss_pred ccccccCc---ccchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccCCHHHHHHHHhcCCCCCCcCH
Confidence 99999887 888999999999999999999999999999999999999999976542 3579
Q ss_pred hhHHHHHHHHhhhcccccccceeeeCCe
Q psy11190 218 GAATAGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
+|+++.+++++++.+...||+.+.+||.
T Consensus 224 eevA~~v~fL~Sd~a~~iTG~~i~VDGG 251 (256)
T 4fs3_A 224 VEVGKTAAYLLSDLSSGVTGENIHVDSG 251 (256)
T ss_dssp HHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHHHHHHHhCchhcCccCCEEEECcC
Confidence 9999999999999999999999999996
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-42 Score=292.17 Aligned_cols=223 Identities=25% Similarity=0.318 Sum_probs=201.3
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHH-HHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|++|||||++|||+++|++|+++| ++|++++|+.++++++.+ +...+.++.++++|++|.++ ++++++++.+.+
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G----~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~-v~~~~~~~~~~~ 103 (283)
T 3v8b_A 29 PVALITGAGSGIGRATALALAADG----VTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQ-MRNAVRDLVLKF 103 (283)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTT----CEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHH-HHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHH-HHHHHHHHHHHh
Confidence 789999999999999999999999 899999999988888744 43445688999999999999 999999999999
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+ ++|+||||||+.....++.+.+.++|++.+++|+.+++++++.++|.|+++ +.|+||++||.++..
T Consensus 104 g--~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-----------~~g~Iv~isS~~~~~ 170 (283)
T 3v8b_A 104 G--HLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQR-----------GGGAIVVVSSINGTR 170 (283)
T ss_dssp S--CCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----------TCEEEEEECCSBTTT
T ss_pred C--CCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----------CCceEEEEcChhhcc
Confidence 8 699999999987555788899999999999999999999999999999886 579999999999876
Q ss_pred --cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC------------------------CC
Q psy11190 161 --EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN------------------------AP 214 (248)
Q Consensus 161 --~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~------------------------~~ 214 (248)
+. ++...|+++|+++++|+++++.|++++||+||+|+||+++|++.... ..
T Consensus 171 ~~~~---~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~ 247 (283)
T 3v8b_A 171 TFTT---PGATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQP 247 (283)
T ss_dssp BCCS---TTCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCHHHHSCCCBCTTCSCGGGTTCC
T ss_pred CCCC---CCchHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccchhhhhhhhhhhhcCccccCCC
Confidence 44 67889999999999999999999999999999999999999987542 12
Q ss_pred CchhhHHHHHHHHhhhcccccccceeeeCCe
Q psy11190 215 LEVGAATAGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
.+|+|+++.+++++++.....+|+.+.+||.
T Consensus 248 ~~pedvA~~v~fL~s~~a~~itG~~i~vdGG 278 (283)
T 3v8b_A 248 GRSEDVAELIRFLVSERARHVTGSPVWIDGG 278 (283)
T ss_dssp BCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred CCHHHHHHHHHHHcCccccCCcCCEEEECcC
Confidence 3789999999999999889999999999986
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-42 Score=287.50 Aligned_cols=221 Identities=25% Similarity=0.385 Sum_probs=201.0
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||++|||+++|++|+++| ++|++++|+.++++++.+... .+..++++|++|.++ ++++++++.+.++
T Consensus 10 k~~lVTGas~gIG~a~a~~l~~~G----~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~-v~~~~~~~~~~~g 82 (248)
T 3op4_A 10 KVALVTGASRGIGKAIAELLAERG----AKVIGTATSESGAQAISDYLG--DNGKGMALNVTNPES-IEAVLKAITDEFG 82 (248)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTT----CEEEEEESSHHHHHHHHHHHG--GGEEEEECCTTCHHH-HHHHHHHHHHHHC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHhc--ccceEEEEeCCCHHH-HHHHHHHHHHHcC
Confidence 799999999999999999999999 899999999988877755443 346789999999999 9999999999998
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+||||||+... .++.+.+.++|++.+++|+.+++++++.++|.|.++ +.|+||++||.++..+
T Consensus 83 --~iD~lv~nAg~~~~-~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~-----------~~g~iv~isS~~~~~~ 148 (248)
T 3op4_A 83 --GVDILVNNAGITRD-NLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKK-----------RQGRIINVGSVVGTMG 148 (248)
T ss_dssp --CCSEEEECCCCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----------TCEEEEEECCHHHHHC
T ss_pred --CCCEEEECCCCCCC-CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----------CCCEEEEEcchhhcCC
Confidence 69999999998765 778888999999999999999999999999999886 5799999999999887
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC---------------CCchhhHHHHHHH
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA---------------PLEVGAATAGIIQ 226 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~---------------~~~~~~~~~~~~~ 226 (248)
. +++..|+++|+++++|+++++.|++++||+||+|+||+++|++.+... ..+|+++++.+++
T Consensus 149 ~---~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~ 225 (248)
T 3op4_A 149 N---AGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALNDEQRTATLAQVPAGRLGDPREIASAVAF 225 (248)
T ss_dssp C---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTSCHHHHHHHHHTCTTCSCBCHHHHHHHHHH
T ss_pred C---CCChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 7 888999999999999999999999999999999999999999976532 3589999999999
Q ss_pred HhhhcccccccceeeeCCee
Q psy11190 227 FIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 227 ~~~~~~~~~~g~~~~~~g~~ 246 (248)
++++.....+|+.+.+||..
T Consensus 226 L~s~~~~~itG~~i~vdgG~ 245 (248)
T 3op4_A 226 LASPEAAYITGETLHVNGGM 245 (248)
T ss_dssp HHSGGGTTCCSCEEEESTTS
T ss_pred HcCCccCCccCcEEEECCCe
Confidence 99988889999999999964
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-42 Score=288.32 Aligned_cols=223 Identities=18% Similarity=0.250 Sum_probs=200.3
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhh---cCCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQ---HSNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
|++|||||++|||+++|++|+++| ++|++++|+.++++++.+.+.. ..++.++++|++|.++ ++.+++++.+
T Consensus 9 k~~lVTGas~GIG~aia~~l~~~G----~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~-v~~~~~~~~~ 83 (265)
T 3lf2_A 9 AVAVVTGGSSGIGLATVELLLEAG----AAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQ-VRAFAEACER 83 (265)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHH-HHHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHH-HHHHHHHHHH
Confidence 789999999999999999999999 8999999999888877444332 2258899999999999 9999999999
Q ss_pred hhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 79 VVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
.++ ++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|.++ +.|+||++||..+
T Consensus 84 ~~g--~id~lvnnAg~~~~-~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----------~~g~iv~isS~~~ 149 (265)
T 3lf2_A 84 TLG--CASILVNNAGQGRV-STFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESR-----------ADAAIVCVNSLLA 149 (265)
T ss_dssp HHC--SCSEEEECCCCCCC-BCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTS-----------TTEEEEEEEEGGG
T ss_pred HcC--CCCEEEECCCCCCC-CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-----------CCeEEEEECCccc
Confidence 988 59999999998765 788899999999999999999999999999999875 5799999999999
Q ss_pred cccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC------------------------C--
Q psy11190 159 SIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS------------------------N-- 212 (248)
Q Consensus 159 ~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~------------------------~-- 212 (248)
..+. ++...|+++|+++++|+++|+.|++++||+||+|+||+++|++.+. .
T Consensus 150 ~~~~---~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 226 (265)
T 3lf2_A 150 SQPE---PHMVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPL 226 (265)
T ss_dssp TSCC---TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTTCTT
T ss_pred CCCC---CCchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCCCc
Confidence 8877 8889999999999999999999999999999999999999986421 1
Q ss_pred -CCCchhhHHHHHHHHhhhcccccccceeeeCCee
Q psy11190 213 -APLEVGAATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 213 -~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
...+|+|+++.+++++++.....+|+.+.+||..
T Consensus 227 ~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~ 261 (265)
T 3lf2_A 227 GRLGKPIEAARAILFLASPLSAYTTGSHIDVSGGL 261 (265)
T ss_dssp CSCBCHHHHHHHHHHHHSGGGTTCCSEEEEESSSC
T ss_pred CCCcCHHHHHHHHHHHhCchhcCcCCCEEEECCCC
Confidence 1348999999999999998899999999999964
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-42 Score=288.37 Aligned_cols=223 Identities=24% Similarity=0.305 Sum_probs=198.7
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecC------------chhHHHHHH-HHhhcCCceeEEeeccCCchh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRN------------KDKAVELLA-LAQQHSNLHVIELDVTDFSKQ 68 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~------------~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~ 68 (248)
|++|||||++|||+++|++|+++| ++|++++|+ .+.+++..+ +...+.++.++++|++|.++
T Consensus 11 k~~lVTGas~gIG~a~a~~l~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~- 85 (281)
T 3s55_A 11 KTALITGGARGMGRSHAVALAEAG----ADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAA- 85 (281)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT----CEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH-
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC----CeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHH-
Confidence 799999999999999999999999 899999997 344444433 33345688999999999999
Q ss_pred hhhHHHHhhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCc
Q psy11190 69 QDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRA 148 (248)
Q Consensus 69 v~~~~~~i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~ 148 (248)
++++++++.+.++ ++|+||||||+... .++.+.+.++|++.+++|+.+++++++.++|.|.++ +.|
T Consensus 86 v~~~~~~~~~~~g--~id~lv~nAg~~~~-~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----------~~g 151 (281)
T 3s55_A 86 LESFVAEAEDTLG--GIDIAITNAGISTI-ALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKR-----------NYG 151 (281)
T ss_dssp HHHHHHHHHHHHT--CCCEEEECCCCCCC-CCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----------TCE
T ss_pred HHHHHHHHHHhcC--CCCEEEECCCCCCC-CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----------CCC
Confidence 9999999999988 59999999998765 778889999999999999999999999999999886 579
Q ss_pred eEEEeecCCCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC-----------------
Q psy11190 149 AIVNVSSIMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS----------------- 211 (248)
Q Consensus 149 ~iv~vss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~----------------- 211 (248)
+||++||..+..+. ++...|+++|+++++|+++|+.|++++||+||+|+||+++|+|.+.
T Consensus 152 ~iv~isS~~~~~~~---~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~ 228 (281)
T 3s55_A 152 RIVTVSSMLGHSAN---FAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLK 228 (281)
T ss_dssp EEEEECCGGGGSCC---TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHH
T ss_pred EEEEECChhhcCCC---CCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhccccccccccchh
Confidence 99999999998877 7889999999999999999999999999999999999999998753
Q ss_pred -------------CCCCchhhHHHHHHHHhhhcccccccceeeeCCee
Q psy11190 212 -------------NAPLEVGAATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 212 -------------~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
....+|+|+++.+++++++.....+|+.+.+||..
T Consensus 229 ~~~~~~~~~~~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~ 276 (281)
T 3s55_A 229 DVESVFASLHLQYAPFLKPEEVTRAVLFLVDEASSHITGTVLPIDAGA 276 (281)
T ss_dssp HHHHHHHHHCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHHHHhhhccCcCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCc
Confidence 11347999999999999998889999999999863
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-42 Score=287.55 Aligned_cols=223 Identities=25% Similarity=0.277 Sum_probs=201.2
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEe-ecCchhHHHHHHHH-hhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFAT-CRNKDKAVELLALA-QQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~-~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|++|||||++|||++++++|+++| ++|++. +|+.+.++++.+.. ..+.++.++++|++|.++ ++++++++.+.
T Consensus 5 k~vlVTGas~gIG~aia~~l~~~G----~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-v~~~~~~~~~~ 79 (258)
T 3oid_A 5 KCALVTGSSRGVGKAAAIRLAENG----YNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAK-IKEMFQQIDET 79 (258)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTT----CEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHH-HHHHHHHHHHH
T ss_pred CEEEEecCCchHHHHHHHHHHHCC----CEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHH-HHHHHHHHHHH
Confidence 799999999999999999999999 899886 89988887774443 345689999999999999 99999999999
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
++ ++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|+++ +.|+||++||..+.
T Consensus 80 ~g--~id~lv~nAg~~~~-~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~-----------~~g~iv~isS~~~~ 145 (258)
T 3oid_A 80 FG--RLDVFVNNAASGVL-RPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKN-----------GGGHIVSISSLGSI 145 (258)
T ss_dssp HS--CCCEEEECCCCCCC-SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT-----------TCEEEEEEEEGGGT
T ss_pred cC--CCCEEEECCCCCCC-CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----------CCcEEEEECchhhC
Confidence 98 59999999998765 778888999999999999999999999999999886 57899999999998
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC-----------------CCchhhHHH
Q psy11190 160 IEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA-----------------PLEVGAATA 222 (248)
Q Consensus 160 ~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~-----------------~~~~~~~~~ 222 (248)
.+. +++..|+++|+++++|+++++.|++++||+||+|+||+++|++.+... ..+|+++++
T Consensus 146 ~~~---~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~ 222 (258)
T 3oid_A 146 RYL---ENYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNREDLLEDARQNTPAGRMVEIKDMVD 222 (258)
T ss_dssp SBC---TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTTHHHHHHHHHHHCTTSSCBCHHHHHH
T ss_pred CCC---CCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcccCHHHHHHHHhcCCCCCCcCHHHHHH
Confidence 776 788999999999999999999999999999999999999999865432 357999999
Q ss_pred HHHHHhhhcccccccceeeeCCee
Q psy11190 223 GIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 223 ~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
.+++++++.....+|+.+.+||..
T Consensus 223 ~v~~L~s~~~~~itG~~i~vdGG~ 246 (258)
T 3oid_A 223 TVEFLVSSKADMIRGQTIIVDGGR 246 (258)
T ss_dssp HHHHHTSSTTTTCCSCEEEESTTG
T ss_pred HHHHHhCcccCCccCCEEEECCCc
Confidence 999999998889999999999864
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-42 Score=290.60 Aligned_cols=225 Identities=24% Similarity=0.279 Sum_probs=199.5
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecC------------chhHHHHH-HHHhhcCCceeEEeeccCCchh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRN------------KDKAVELL-ALAQQHSNLHVIELDVTDFSKQ 68 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~------------~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~~ 68 (248)
|++|||||++|||+++|++|+++| ++|++++|+ .+++++.. ++...+.++.++++|++|.++
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G----~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~- 103 (299)
T 3t7c_A 29 KVAFITGAARGQGRSHAITLAREG----ADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDA- 103 (299)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT----CEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH-
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC----CEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHH-
Confidence 799999999999999999999999 899999987 45555553 333445689999999999999
Q ss_pred hhhHHHHhhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCc
Q psy11190 69 QDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRA 148 (248)
Q Consensus 69 v~~~~~~i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~ 148 (248)
++++++++.+.++ ++|+||||||......++.+.+.++|++.+++|+.+++++++.++|.|.+++ +.|
T Consensus 104 v~~~~~~~~~~~g--~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~----------~~g 171 (299)
T 3t7c_A 104 MQAAVDDGVTQLG--RLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGK----------RGG 171 (299)
T ss_dssp HHHHHHHHHHHHS--CCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT----------SCE
T ss_pred HHHHHHHHHHHhC--CCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC----------CCc
Confidence 9999999999998 5999999999887644588899999999999999999999999999988752 368
Q ss_pred eEEEeecCCCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC-----------------
Q psy11190 149 AIVNVSSIMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS----------------- 211 (248)
Q Consensus 149 ~iv~vss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~----------------- 211 (248)
+||++||.++..+. ++...|+++|+++++|+++|+.|++++||+||+|+||+++|+|...
T Consensus 172 ~Iv~isS~~~~~~~---~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~ 248 (299)
T 3t7c_A 172 SIVFTSSIGGLRGA---ENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVE 248 (299)
T ss_dssp EEEEECCGGGTSCC---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHH
T ss_pred EEEEECChhhccCC---CCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccchhh
Confidence 99999999998877 7889999999999999999999999999999999999999999743
Q ss_pred -------------CCCCchhhHHHHHHHHhhhcccccccceeeeCCee
Q psy11190 212 -------------NAPLEVGAATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 212 -------------~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
....+|+|+++.+++++++.....+|+.+.+||..
T Consensus 249 ~~~~~~~~~~~~p~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~ 296 (299)
T 3t7c_A 249 DFQVASRQMHVLPIPYVEPADISNAILFLVSDDARYITGVSLPVDGGA 296 (299)
T ss_dssp HHHHHHHHHSSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHHhhhhcccCcCCCCHHHHHHHHHHHhCcccccCcCCEEeeCCCc
Confidence 11347999999999999998899999999999964
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-42 Score=289.30 Aligned_cols=225 Identities=21% Similarity=0.225 Sum_probs=198.9
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecC----------------chhHHHHHHHH-hhcCCceeEEeeccC
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRN----------------KDKAVELLALA-QQHSNLHVIELDVTD 64 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~----------------~~~~~~~~~~~-~~~~~~~~~~~D~~~ 64 (248)
|++|||||++|||+++|++|+++| ++|++++|+ .++++++.+.. ..+.++.++++|++|
T Consensus 12 k~~lVTGas~gIG~aia~~la~~G----~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~ 87 (286)
T 3uve_A 12 KVAFVTGAARGQGRSHAVRLAQEG----ADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRD 87 (286)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT----CEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTC
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC----CeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCC
Confidence 799999999999999999999999 899999887 45555554333 335688999999999
Q ss_pred CchhhhhHHHHhhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCC
Q psy11190 65 FSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLG 144 (248)
Q Consensus 65 ~~~~v~~~~~~i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~ 144 (248)
.++ ++++++++.+.++ ++|+||||||......++.+.+.++|++.+++|+.+++++++.++|.|.+++
T Consensus 88 ~~~-v~~~~~~~~~~~g--~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--------- 155 (286)
T 3uve_A 88 YDA-LKAAVDSGVEQLG--RLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGG--------- 155 (286)
T ss_dssp HHH-HHHHHHHHHHHHS--CCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---------
T ss_pred HHH-HHHHHHHHHHHhC--CCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC---------
Confidence 999 9999999999998 5999999999876634578889999999999999999999999999998862
Q ss_pred CCCceEEEeecCCCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC-------------
Q psy11190 145 SSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS------------- 211 (248)
Q Consensus 145 ~~~~~iv~vss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~------------- 211 (248)
..|+||++||..+..+. ++...|+++|+++++|+++|+.|++++||+||+|+||+++|+|.+.
T Consensus 156 -~~g~iv~isS~~~~~~~---~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~ 231 (286)
T 3uve_A 156 -RGGSIILTSSVGGLKAY---PHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLEN 231 (286)
T ss_dssp -SCEEEEEECCGGGTSCC---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCTTSSS
T ss_pred -CCcEEEEECchhhccCC---CCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhccccccc
Confidence 36899999999998876 7889999999999999999999999999999999999999998752
Q ss_pred -----------------CCCCchhhHHHHHHHHhhhcccccccceeeeCCee
Q psy11190 212 -----------------NAPLEVGAATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 212 -----------------~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
....+|+|+++.+++++++.....+|+.+.+||..
T Consensus 232 ~~~~~~~~~~~~~~~~p~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~ 283 (286)
T 3uve_A 232 PGPDDMAPICQMFHTLPIPWVEPIDISNAVLFFASDEARYITGVTLPIDAGS 283 (286)
T ss_dssp CCHHHHHHHHHTTCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred cchhhHHHHHHhhhccCCCcCCHHHHHHHHHHHcCccccCCcCCEEeECCcc
Confidence 11247999999999999998899999999999863
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-42 Score=288.36 Aligned_cols=222 Identities=24% Similarity=0.304 Sum_probs=200.3
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHH-HHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|++|||||++|||+++|++|+++| ++|++++|+.++++++.+ +...+.++.++++|++|.++ ++.+++++.+.+
T Consensus 13 k~vlVTGas~gIG~~ia~~l~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~-v~~~~~~~~~~~ 87 (256)
T 3gaf_A 13 AVAIVTGAAAGIGRAIAGTFAKAG----ASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQH-REAVIKAALDQF 87 (256)
T ss_dssp CEEEECSCSSHHHHHHHHHHHHHT----CEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHH-HHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHH-HHHHHHHHHHHc
Confidence 799999999999999999999999 899999999988887744 44445689999999999999 999999999998
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+ ++|+||||||...+ .++ +.+.++|++.+++|+.+++++++.++|.|.++ +.|+||++||.++..
T Consensus 88 g--~id~lv~nAg~~~~-~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-----------~~g~iv~isS~~~~~ 152 (256)
T 3gaf_A 88 G--KITVLVNNAGGGGP-KPF-DMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKA-----------GGGAILNISSMAGEN 152 (256)
T ss_dssp S--CCCEEEECCCCCCC-CCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----------TCEEEEEECCGGGTC
T ss_pred C--CCCEEEECCCCCCC-CCC-CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----------CCcEEEEEcCHHHcC
Confidence 8 69999999998765 566 78999999999999999999999999999886 579999999999988
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC----------------CCCCchhhHHHHH
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS----------------NAPLEVGAATAGI 224 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~----------------~~~~~~~~~~~~~ 224 (248)
+. ++...|+++|+++++|+++++.|++++||+||+|+||+++|++... ....+|+++++.+
T Consensus 153 ~~---~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~ 229 (256)
T 3gaf_A 153 TN---VRMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLTPEIERAMLKHTPLGRLGEAQDIANAA 229 (256)
T ss_dssp CC---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHCCHHHHHHHHTTCTTSSCBCHHHHHHHH
T ss_pred CC---CCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhccCHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence 76 7889999999999999999999999999999999999999997432 1145899999999
Q ss_pred HHHhhhcccccccceeeeCCee
Q psy11190 225 IQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 225 ~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
++++++.....+|+.+.+||..
T Consensus 230 ~~L~s~~~~~itG~~i~vdgG~ 251 (256)
T 3gaf_A 230 LFLCSPAAAWISGQVLTVSGGG 251 (256)
T ss_dssp HHHHSGGGTTCCSCEEEESTTS
T ss_pred HHHcCCcccCccCCEEEECCCc
Confidence 9999988889999999999864
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-42 Score=286.90 Aligned_cols=223 Identities=25% Similarity=0.304 Sum_probs=200.4
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhh-c-CCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQ-H-SNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|++|||||++|||+++|++|+++| ++|++++|+.++++++.+.+.. + .++.++++|++|.++ ++++++++.+.
T Consensus 11 k~vlVTGas~gIG~aia~~l~~~G----~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~-v~~~~~~~~~~ 85 (262)
T 3pk0_A 11 RSVVVTGGTKGIGRGIATVFARAG----ANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQ-CDALAGRAVEE 85 (262)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHH-HHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHH-HHHHHHHHHHH
Confidence 799999999999999999999999 8999999999988877444433 3 478999999999999 99999999999
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
++ ++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|.++ +.++||++||..+.
T Consensus 86 ~g--~id~lvnnAg~~~~-~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-----------~~g~iv~isS~~~~ 151 (262)
T 3pk0_A 86 FG--GIDVVCANAGVFPD-APLATMTPEQLNGIFAVNVNGTFYAVQACLDALIAS-----------GSGRVVLTSSITGP 151 (262)
T ss_dssp HS--CCSEEEECCCCCCC-CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----------SSCEEEEECCSBTT
T ss_pred hC--CCCEEEECCCCCCC-CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----------CCcEEEEEechhhc
Confidence 98 59999999998765 788889999999999999999999999999999886 57999999999986
Q ss_pred -ccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC---------------CCCchhhHHHH
Q psy11190 160 -IEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN---------------APLEVGAATAG 223 (248)
Q Consensus 160 -~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~---------------~~~~~~~~~~~ 223 (248)
.+. +++..|+++|+++++|+++++.|++++||+||+|+||+++|++.... ...+|+++++.
T Consensus 152 ~~~~---~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~ 228 (262)
T 3pk0_A 152 ITGY---PGWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLENGEEYIASMARSIPAGALGTPEDIGHL 228 (262)
T ss_dssp TBCC---TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTTCHHHHHHHHTTSTTSSCBCHHHHHHH
T ss_pred cCCC---CCChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccccCHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence 555 77889999999999999999999999999999999999999864332 13589999999
Q ss_pred HHHHhhhcccccccceeeeCCee
Q psy11190 224 IIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 224 ~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
+++++++.....+|+.+.+||..
T Consensus 229 v~~L~s~~~~~itG~~i~vdGG~ 251 (262)
T 3pk0_A 229 AAFLATKEAGYITGQAIAVDGGQ 251 (262)
T ss_dssp HHHHHSGGGTTCCSCEEEESTTT
T ss_pred HHHHhCccccCCcCCEEEECCCe
Confidence 99999998889999999999863
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-42 Score=288.01 Aligned_cols=224 Identities=22% Similarity=0.274 Sum_probs=199.2
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeec-------------CchhHHHHHH-HHhhcCCceeEEeeccCCch
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCR-------------NKDKAVELLA-LAQQHSNLHVIELDVTDFSK 67 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r-------------~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~ 67 (248)
|++|||||++|||+++|++|+++| ++|++++| +.++++++.+ +...+.++.++++|++|.++
T Consensus 12 k~~lVTGas~GIG~a~a~~la~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 87 (277)
T 3tsc_A 12 RVAFITGAARGQGRAHAVRMAAEG----ADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDR 87 (277)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT----CEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred CEEEEECCccHHHHHHHHHHHHcC----CEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence 789999999999999999999999 89999998 4555555533 33345688999999999999
Q ss_pred hhhhHHHHhhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCC
Q psy11190 68 QQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSR 147 (248)
Q Consensus 68 ~v~~~~~~i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~ 147 (248)
++++++++.+.++ ++|+||||||...+ .++.+.+.++|++.+++|+.+++++++.++|.|.+++ ..
T Consensus 88 -v~~~~~~~~~~~g--~id~lvnnAg~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~----------~~ 153 (277)
T 3tsc_A 88 -LRKVVDDGVAALG--RLDIIVANAGVAAP-QAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGG----------RG 153 (277)
T ss_dssp -HHHHHHHHHHHHS--CCCEEEECCCCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT----------SC
T ss_pred -HHHHHHHHHHHcC--CCCEEEECCCCCCC-CChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC----------CC
Confidence 9999999999988 59999999998875 7788899999999999999999999999999998862 36
Q ss_pred ceEEEeecCCCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC----------------
Q psy11190 148 AAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS---------------- 211 (248)
Q Consensus 148 ~~iv~vss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~---------------- 211 (248)
|+||++||.++..+. ++...|+++|+++++|+++|+.|++++||+||+|+||+++|+|...
T Consensus 154 g~iv~isS~~~~~~~---~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~ 230 (277)
T 3tsc_A 154 GSIILISSAAGMKMQ---PFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQL 230 (277)
T ss_dssp EEEEEECCGGGTSCC---SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHHHHHHHHHHHHTCGGG
T ss_pred CEEEEEccHhhCCCC---CCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccchhhhhhhhcccccHHH
Confidence 899999999998776 7888999999999999999999999999999999999999998542
Q ss_pred ---------CCCCchhhHHHHHHHHhhhcccccccceeeeCCee
Q psy11190 212 ---------NAPLEVGAATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 212 ---------~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
....+|+++++.+++++++.....+|+.+.+||..
T Consensus 231 ~~~~~~~~p~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~ 274 (277)
T 3tsc_A 231 SHVLTPFLPDWVAEPEDIADTVCWLASDESRKVTAAQIPVDQGS 274 (277)
T ss_dssp TTTTCCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHhhhccCCCCCCHHHHHHHHHHHhCccccCCcCCEEeeCCCc
Confidence 11357999999999999998899999999999964
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-42 Score=288.80 Aligned_cols=224 Identities=21% Similarity=0.260 Sum_probs=200.9
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHH-hhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALA-QQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|++|||||++|||+++|++|+++| ++|++++|+.++++++.+.. ..+.++.++++|++|.++ ++.+++.+.+.+
T Consensus 9 k~vlVTGas~GIG~aia~~la~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-v~~~~~~~~~~~ 83 (280)
T 3tox_A 9 KIAIVTGASSGIGRAAALLFAREG----AKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEAL-HEALVELAVRRF 83 (280)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTT----CEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHH-HHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHH-HHHHHHHHHHHc
Confidence 789999999999999999999999 89999999998888875443 345688999999999999 999999999999
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc-
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS- 159 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~- 159 (248)
+ ++|+||||||......++.+.+.++|++.+++|+.+++++++.++|.|.++ +.|+||++||..+.
T Consensus 84 g--~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-----------~~g~iv~isS~~~~~ 150 (280)
T 3tox_A 84 G--GLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAAL-----------GGGSLTFTSSFVGHT 150 (280)
T ss_dssp S--CCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----------TCEEEEEECCSBTTT
T ss_pred C--CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----------CCCEEEEEcChhhCc
Confidence 8 599999999987544778888999999999999999999999999999886 57899999999987
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC-C------------------CCCchhhH
Q psy11190 160 IEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS-N------------------APLEVGAA 220 (248)
Q Consensus 160 ~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~-~------------------~~~~~~~~ 220 (248)
.+. ++...|+++|+++++|+++|+.|++++||+||+|+||+++|++... . ...+|+++
T Consensus 151 ~~~---~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedv 227 (280)
T 3tox_A 151 AGF---AGVAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHALKRIARPEEI 227 (280)
T ss_dssp BCC---TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTSTTSSCBCHHHH
T ss_pred CCC---CCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhccCccCCCcCHHHH
Confidence 454 7788999999999999999999999999999999999999998643 1 13579999
Q ss_pred HHHHHHHhhhcccccccceeeeCCee
Q psy11190 221 TAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 221 ~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
++.+++++++.....+|+.+.+||..
T Consensus 228 A~~v~~L~s~~a~~itG~~i~vdGG~ 253 (280)
T 3tox_A 228 AEAALYLASDGASFVTGAALLADGGA 253 (280)
T ss_dssp HHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHHHHhCccccCCcCcEEEECCCc
Confidence 99999999998889999999999863
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-42 Score=287.63 Aligned_cols=224 Identities=27% Similarity=0.242 Sum_probs=199.9
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeec-------------CchhHHHHHHHH-hhcCCceeEEeeccCCch
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCR-------------NKDKAVELLALA-QQHSNLHVIELDVTDFSK 67 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r-------------~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~ 67 (248)
|++|||||++|||+++|++|+++| ++|++++| +.++++++.+.. ..+.++.++++|++|.++
T Consensus 16 k~~lVTGas~gIG~a~a~~la~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~ 91 (280)
T 3pgx_A 16 RVAFITGAARGQGRSHAVRLAAEG----ADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAA 91 (280)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT----CEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC----CEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH
Confidence 789999999999999999999999 89999998 556666664433 345688999999999999
Q ss_pred hhhhHHHHhhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCC
Q psy11190 68 QQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSR 147 (248)
Q Consensus 68 ~v~~~~~~i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~ 147 (248)
++++++++.+.++ ++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|.+++ ..
T Consensus 92 -v~~~~~~~~~~~g--~id~lvnnAg~~~~-~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~----------~~ 157 (280)
T 3pgx_A 92 -LRELVADGMEQFG--RLDVVVANAGVLSW-GRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAG----------NG 157 (280)
T ss_dssp -HHHHHHHHHHHHC--CCCEEEECCCCCCC-BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC----------SC
T ss_pred -HHHHHHHHHHHcC--CCCEEEECCCCCCC-CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC----------CC
Confidence 9999999999988 59999999998865 7788899999999999999999999999999998862 37
Q ss_pred ceEEEeecCCCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC----------------
Q psy11190 148 AAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS---------------- 211 (248)
Q Consensus 148 ~~iv~vss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~---------------- 211 (248)
|+||++||..+..+. ++...|+++|+++++|+++|+.|++++||+||+|+||+++|++...
T Consensus 158 g~iv~isS~~~~~~~---~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~ 234 (280)
T 3pgx_A 158 GSIVVVSSSAGLKAT---PGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHS 234 (280)
T ss_dssp EEEEEECCGGGTSCC---TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHHHHHHHHHHCGGGGGG
T ss_pred CEEEEEcchhhccCC---CCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchhhhhhhhhcCchhhhh
Confidence 899999999998877 7889999999999999999999999999999999999999998753
Q ss_pred --------CCCCchhhHHHHHHHHhhhcccccccceeeeCCee
Q psy11190 212 --------NAPLEVGAATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 212 --------~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
....+|+|+++.+++++++.....+|+.+.+||..
T Consensus 235 ~~~~~~~~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~ 277 (280)
T 3pgx_A 235 FPPMPVQPNGFMTADEVADVVAWLAGDGSGTLTGTQIPVDKGA 277 (280)
T ss_dssp SCCBTTBCSSCBCHHHHHHHHHHHHSGGGTTCSSCEEEESTTG
T ss_pred hhhcccCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence 01347999999999999998889999999999974
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-42 Score=287.95 Aligned_cols=224 Identities=19% Similarity=0.281 Sum_probs=201.7
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHH-HHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|++|||||++|||+++|++|+++| ++|++++|+.++++++.+ +...+.++.++++|++|.++ ++++++++.+.+
T Consensus 12 k~vlVTGas~gIG~aia~~l~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-v~~~~~~~~~~~ 86 (264)
T 3ucx_A 12 KVVVISGVGPALGTTLARRCAEQG----ADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQ-VAHLVDETMKAY 86 (264)
T ss_dssp CEEEEESCCTTHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH-HHHHHHHHHHHT
T ss_pred cEEEEECCCcHHHHHHHHHHHHCc----CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHH-HHHHHHHHHHHc
Confidence 799999999999999999999999 899999999998888744 44445689999999999999 999999999998
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+ ++|+||||||......++.+.+.++|++.+++|+.+++++++.++|.|.++ +|+||++||..+..
T Consensus 87 g--~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~------------~g~iv~isS~~~~~ 152 (264)
T 3ucx_A 87 G--RVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEES------------KGAVVNVNSMVVRH 152 (264)
T ss_dssp S--CCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHH------------TCEEEEECCGGGGC
T ss_pred C--CCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc------------CCEEEEECcchhcc
Confidence 8 599999999986545778889999999999999999999999999999874 48999999999988
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC--------------------------CCC
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS--------------------------NAP 214 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~--------------------------~~~ 214 (248)
+. +++..|+++|+++++|+++++.|++++||+||+|+||+++|++.+. ...
T Consensus 153 ~~---~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~ 229 (264)
T 3ucx_A 153 SQ---AKYGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRL 229 (264)
T ss_dssp CC---TTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSSSSSC
T ss_pred CC---CccHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhccCCcccC
Confidence 76 7888999999999999999999999999999999999999987432 114
Q ss_pred CchhhHHHHHHHHhhhcccccccceeeeCCeec
Q psy11190 215 LEVGAATAGIIQFIQSLGEAHNGGFFEYTGKAI 247 (248)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~ 247 (248)
.+|+|+++.+++++++.....+|+.+.+||...
T Consensus 230 ~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~ 262 (264)
T 3ucx_A 230 PTEDEVASAILFMASDLASGITGQALDVNCGEY 262 (264)
T ss_dssp CBHHHHHHHHHHHHSGGGTTCCSCEEEESTTSS
T ss_pred CCHHHHHHHHHHHcCccccCCCCCEEEECCCcc
Confidence 589999999999999988899999999999753
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-42 Score=282.54 Aligned_cols=223 Identities=23% Similarity=0.341 Sum_probs=199.6
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeec-CchhHHHHHH-HHhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCR-NKDKAVELLA-LAQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r-~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|++|||||++|||+++|++|+++| ++|++.++ +.++++++.+ +...+.++.++++|++|.++ ++++++++.+.
T Consensus 5 k~~lVTGas~gIG~~ia~~l~~~G----~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~-v~~~~~~~~~~ 79 (246)
T 3osu_A 5 KSALVTGASRGIGRSIALQLAEEG----YNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADE-VKAMIKEVVSQ 79 (246)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTT----CEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHH-HHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCC----CEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHH-HHHHHHHHHHH
Confidence 799999999999999999999999 89988877 4466666643 33445688999999999999 99999999999
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
++ ++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|.++ +.|+||++||.++.
T Consensus 80 ~g--~id~lv~nAg~~~~-~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-----------~~g~iv~isS~~~~ 145 (246)
T 3osu_A 80 FG--SLDVLVNNAGITRD-NLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQ-----------RSGAIINLSSVVGA 145 (246)
T ss_dssp HS--CCCEEEECCCCCCC-CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----------TCEEEEEECCHHHH
T ss_pred cC--CCCEEEECCCCCCC-CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----------CCCEEEEEcchhhc
Confidence 88 59999999998765 778889999999999999999999999999999886 57999999999988
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC---------------CCchhhHHHHH
Q psy11190 160 IEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA---------------PLEVGAATAGI 224 (248)
Q Consensus 160 ~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~---------------~~~~~~~~~~~ 224 (248)
.+. ++...|+++|+++++|+++++.|++++||+||+|+||+++|++.+... ..+|+++++.+
T Consensus 146 ~~~---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v 222 (246)
T 3osu_A 146 VGN---PGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELKEQMLTQIPLARFGQDTDIANTV 222 (246)
T ss_dssp HCC---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCSCHHHHHHHHTTCTTCSCBCHHHHHHHH
T ss_pred CCC---CCChHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccccCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence 877 788999999999999999999999999999999999999999976532 34799999999
Q ss_pred HHHhhhcccccccceeeeCCee
Q psy11190 225 IQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 225 ~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
+.++++.....+|+.+.++|..
T Consensus 223 ~~l~s~~~~~itG~~i~vdgG~ 244 (246)
T 3osu_A 223 AFLASDKAKYITGQTIHVNGGM 244 (246)
T ss_dssp HHHTSGGGTTCCSCEEEESTTS
T ss_pred HHHhCccccCCCCCEEEeCCCc
Confidence 9999988889999999999864
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-42 Score=289.39 Aligned_cols=223 Identities=25% Similarity=0.312 Sum_probs=201.7
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHH-HHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|++|||||++|||+++|++|+++| ++|++++|+.+.++++.+ +...+.++.++.+|++|.++ ++.+++++.+.+
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~-v~~~~~~~~~~~ 103 (270)
T 3ftp_A 29 QVAIVTGASRGIGRAIALELARRG----AMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATA-VDALVESTLKEF 103 (270)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTT----CEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHH-HHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHH-HHHHHHHHHHHc
Confidence 789999999999999999999999 899999999988887743 44445688999999999999 999999999998
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+ ++|+||||||+... .++.+.+.++|++.+++|+.+++++++.++|.|.++ +.|+||++||.++..
T Consensus 104 g--~iD~lvnnAg~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-----------~~g~iv~isS~~~~~ 169 (270)
T 3ftp_A 104 G--ALNVLVNNAGITQD-QLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKA-----------RGGRIVNITSVVGSA 169 (270)
T ss_dssp S--CCCEEEECCCCCCC-BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----------TCEEEEEECCHHHHH
T ss_pred C--CCCEEEECCCCCCC-CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----------CCCEEEEECchhhCC
Confidence 8 59999999998765 778889999999999999999999999999999876 579999999999988
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC---------------CCCchhhHHHHHH
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN---------------APLEVGAATAGII 225 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~---------------~~~~~~~~~~~~~ 225 (248)
+. +++..|+++|+++++|+++|+.|++++||+||+|+||+++|++.... ...+|+++++.++
T Consensus 170 ~~---~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~ 246 (270)
T 3ftp_A 170 GN---PGQVNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGLPQEQQTALKTQIPLGRLGSPEDIAHAVA 246 (270)
T ss_dssp CC---TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHSCHHHHHHHHTTCTTCSCBCHHHHHHHHH
T ss_pred CC---CCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhcCHHHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence 77 78899999999999999999999999999999999999999975321 1348999999999
Q ss_pred HHhhhcccccccceeeeCCee
Q psy11190 226 QFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 226 ~~~~~~~~~~~g~~~~~~g~~ 246 (248)
+++++.....+|+.+.+||..
T Consensus 247 ~L~s~~~~~itG~~i~vdGG~ 267 (270)
T 3ftp_A 247 FLASPQAGYITGTTLHVNGGM 267 (270)
T ss_dssp HHHSGGGTTCCSCEEEESTTS
T ss_pred HHhCCCcCCccCcEEEECCCc
Confidence 999988889999999999864
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-42 Score=284.08 Aligned_cols=224 Identities=22% Similarity=0.295 Sum_probs=198.9
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHH-HHhhcC-CceeEEeec--cCCchhhhhHHHHhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHS-NLHVIELDV--TDFSKQQDVLFKDIS 77 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~-~~~~~~-~~~~~~~D~--~~~~~~v~~~~~~i~ 77 (248)
|++|||||++|||+++|++|+++| ++|++++|+.++++++.+ +..... ++.++++|+ +|.++ ++++++++.
T Consensus 13 k~vlVTGas~gIG~aia~~l~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~-~~~~~~~~~ 87 (252)
T 3f1l_A 13 RIILVTGASDGIGREAAMTYARYG----ATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSEN-CQQLAQRIA 87 (252)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHH-HHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHH-HHHHHHHHH
Confidence 799999999999999999999999 899999999988887744 333333 788999999 99988 999999999
Q ss_pred hhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCC
Q psy11190 78 DVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIM 157 (248)
Q Consensus 78 ~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~ 157 (248)
+.++ ++|+||||||......++.+.+.++|++.+++|+.+++++++.++|.|+++ +.|+||++||..
T Consensus 88 ~~~g--~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-----------~~g~iv~isS~~ 154 (252)
T 3f1l_A 88 VNYP--RLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKS-----------DAGSLVFTSSSV 154 (252)
T ss_dssp HHCS--CCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTS-----------SSCEEEEECCGG
T ss_pred HhCC--CCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHC-----------CCCEEEEECChh
Confidence 9887 599999999986554688889999999999999999999999999999875 579999999999
Q ss_pred CcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC-------CCCCchhhHHHHHHHHhhh
Q psy11190 158 GSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS-------NAPLEVGAATAGIIQFIQS 230 (248)
Q Consensus 158 ~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~-------~~~~~~~~~~~~~~~~~~~ 230 (248)
+..+. ++...|+++|+++++|+++|+.|++++ ||||+|+||+++|+|... ....+|+++++.+++++++
T Consensus 155 ~~~~~---~~~~~Y~asK~a~~~l~~~la~e~~~~-irvn~v~PG~v~t~~~~~~~~~~~~~~~~~p~dva~~~~~L~s~ 230 (252)
T 3f1l_A 155 GRQGR---ANWGAYAASKFATEGMMQVLADEYQQR-LRVNCINPGGTRTAMRASAFPTEDPQKLKTPADIMPLYLWLMGD 230 (252)
T ss_dssp GTSCC---TTCHHHHHHHHHHHHHHHHHHHHTTTT-CEEEEEECCSBSSHHHHHHCTTCCGGGSBCTGGGHHHHHHHHSG
T ss_pred hccCC---CCCchhHHHHHHHHHHHHHHHHHhcCC-cEEEEEecCcccCchhhhhCCccchhccCCHHHHHHHHHHHcCc
Confidence 98877 788999999999999999999999987 999999999999997432 1245799999999999999
Q ss_pred cccccccceeeeCCeec
Q psy11190 231 LGEAHNGGFFEYTGKAI 247 (248)
Q Consensus 231 ~~~~~~g~~~~~~g~~~ 247 (248)
.....+|+.+.+||...
T Consensus 231 ~~~~itG~~i~vdgG~~ 247 (252)
T 3f1l_A 231 DSRRKTGMTFDAQPGRK 247 (252)
T ss_dssp GGTTCCSCEEESSCC--
T ss_pred cccCCCCCEEEeCCCcC
Confidence 88999999999999754
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-42 Score=284.14 Aligned_cols=222 Identities=20% Similarity=0.252 Sum_probs=200.6
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||++|||+++|++|+++| ++|++++|+.++++++.+.. +.++.++++|++|.++ ++++++++.+.++
T Consensus 7 k~vlVTGas~gIG~a~a~~l~~~G----~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~-v~~~~~~~~~~~g 79 (247)
T 3rwb_A 7 KTALVTGAAQGIGKAIAARLAADG----ATVIVSDINAEGAKAAAASI--GKKARAIAADISDPGS-VKALFAEIQALTG 79 (247)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT----CEEEEECSCHHHHHHHHHHH--CTTEEECCCCTTCHHH-HHHHHHHHHHHHS
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHh--CCceEEEEcCCCCHHH-HHHHHHHHHHHCC
Confidence 799999999999999999999999 89999999998877764443 5678999999999999 9999999999988
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|++++ ..|+||++||..+..+
T Consensus 80 --~id~lv~nAg~~~~-~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~----------~~g~iv~isS~~~~~~ 146 (247)
T 3rwb_A 80 --GIDILVNNASIVPF-VAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAG----------KAGRVISIASNTFFAG 146 (247)
T ss_dssp --CCSEEEECCCCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT----------CCEEEEEECCTHHHHT
T ss_pred --CCCEEEECCCCCCC-CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC----------CCcEEEEECchhhccC
Confidence 59999999998765 7788899999999999999999999999999998862 3689999999998877
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC----------------CCCchhhHHHHHH
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN----------------APLEVGAATAGII 225 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~----------------~~~~~~~~~~~~~ 225 (248)
. +++..|+++|+++++|+++++.|++++||+||+|+||+++|++.... ...+|+++++.++
T Consensus 147 ~---~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~r~~~pedva~~v~ 223 (247)
T 3rwb_A 147 T---PNMAAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPHNEAFGFVEMLQAMKGKGQPEHIADVVS 223 (247)
T ss_dssp C---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGGGGHHHHHHHSSSCSCBCHHHHHHHHH
T ss_pred C---CCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccChhHHHHHHhcccccCCCcCHHHHHHHHH
Confidence 6 88899999999999999999999999999999999999999875331 1357999999999
Q ss_pred HHhhhcccccccceeeeCCee
Q psy11190 226 QFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 226 ~~~~~~~~~~~g~~~~~~g~~ 246 (248)
+++++.....+|+.+.+||..
T Consensus 224 ~L~s~~~~~itG~~i~vdGG~ 244 (247)
T 3rwb_A 224 FLASDDARWITGQTLNVDAGM 244 (247)
T ss_dssp HHHSGGGTTCCSCEEEESTTS
T ss_pred HHhCccccCCCCCEEEECCCc
Confidence 999998889999999999974
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-42 Score=289.43 Aligned_cols=223 Identities=22% Similarity=0.306 Sum_probs=202.2
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHH-HHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELL-ALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|++|||||++|||+++|++|+++| ++|++++|+.++++++. ++...+.++.++++|++|.++ ++++++++.+.+
T Consensus 27 k~~lVTGas~gIG~aia~~la~~G----~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~-v~~~~~~~~~~~ 101 (271)
T 4ibo_A 27 RTALVTGSSRGLGRAMAEGLAVAG----ARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESE-IIEAFARLDEQG 101 (271)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTT----CEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHH-HHHHHHHHHHHT
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHH-HHHHHHHHHHHC
Confidence 799999999999999999999999 89999999998888774 444445688999999999999 999999999998
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+ ++|+||||||+... .++.+.+.++|++.+++|+.+++++++.++|.|.++ +.|+||++||..+..
T Consensus 102 g--~iD~lv~nAg~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-----------~~g~iV~isS~~~~~ 167 (271)
T 4ibo_A 102 I--DVDILVNNAGIQFR-KPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPR-----------GYGKIVNIGSLTSEL 167 (271)
T ss_dssp C--CCCEEEECCCCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----------TCEEEEEECCGGGTS
T ss_pred C--CCCEEEECCCCCCC-CCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----------CCcEEEEEccHHhCC
Confidence 7 59999999998765 778888999999999999999999999999999886 579999999999988
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC-----------------CCCchhhHHHH
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN-----------------APLEVGAATAG 223 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~-----------------~~~~~~~~~~~ 223 (248)
+. ++...|+++|+++++|+++|+.|++++||+||+|+||+++|+|.+.. ...+|+|+++.
T Consensus 168 ~~---~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~ 244 (271)
T 4ibo_A 168 AR---ATVAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDNPEFDAWVKARTPAKRWGKPQELVGT 244 (271)
T ss_dssp BC---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHCHHHHHHHHHHSTTCSCBCGGGGHHH
T ss_pred CC---CCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcccCHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence 77 78899999999999999999999999999999999999999985431 14579999999
Q ss_pred HHHHhhhcccccccceeeeCCee
Q psy11190 224 IIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 224 ~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
+++++++.....+|+.+.+||..
T Consensus 245 v~~L~s~~~~~itG~~i~vdGG~ 267 (271)
T 4ibo_A 245 AVFLSASASDYVNGQIIYVDGGM 267 (271)
T ss_dssp HHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHhCccccCCCCcEEEECCCe
Confidence 99999998889999999999964
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-42 Score=287.39 Aligned_cols=224 Identities=24% Similarity=0.299 Sum_probs=201.0
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHH-h-hcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALA-Q-QHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~-~-~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|++|||||++|||+++|++|+++| ++|++++|+.++++++.+.+ . .+.++.++++|++|.++ ++++++++.+.
T Consensus 21 k~vlVTGas~gIG~aia~~l~~~G----~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~-v~~~~~~~~~~ 95 (266)
T 4egf_A 21 KRALITGATKGIGADIARAFAAAG----ARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDA-PAELARRAAEA 95 (266)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTH-HHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHH-HHHHHHHHHHH
Confidence 799999999999999999999999 89999999998888774433 3 35689999999999999 99999999999
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
++ ++|+||||||...+ .++.+.+.++|++.+++|+.+++++++.++|.|.+++ ..|+||++||..+.
T Consensus 96 ~g--~id~lv~nAg~~~~-~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~----------~~g~iv~isS~~~~ 162 (266)
T 4egf_A 96 FG--GLDVLVNNAGISHP-QPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAG----------EGGAIITVASAAAL 162 (266)
T ss_dssp HT--SCSEEEEECCCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT----------SCEEEEEECCGGGT
T ss_pred cC--CCCEEEECCCcCCC-CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC----------CCeEEEEEcchhhc
Confidence 88 59999999998875 7778889999999999999999999999999998862 36899999999998
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC-----------------CCCchhhHHH
Q psy11190 160 IEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN-----------------APLEVGAATA 222 (248)
Q Consensus 160 ~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~-----------------~~~~~~~~~~ 222 (248)
.+. ++...|+++|+++++|+++|+.|++++||+||+|+||+++|++.+.. ...+|+|+++
T Consensus 163 ~~~---~~~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~ 239 (266)
T 4egf_A 163 APL---PDHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDEAKSAPMIARIPLGRFAVPHEVSD 239 (266)
T ss_dssp SCC---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCSHHHHHHHHTTCTTSSCBCHHHHHH
T ss_pred cCC---CCChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccChHHHHHHHhcCCCCCCcCHHHHHH
Confidence 776 78899999999999999999999999999999999999999974321 1357999999
Q ss_pred HHHHHhhhcccccccceeeeCCee
Q psy11190 223 GIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 223 ~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
.+++++++.....+|+.+.+||..
T Consensus 240 ~v~~L~s~~~~~itG~~i~vdGG~ 263 (266)
T 4egf_A 240 AVVWLASDAASMINGVDIPVDGGY 263 (266)
T ss_dssp HHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHHhCchhcCccCcEEEECCCc
Confidence 999999998899999999999863
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-42 Score=284.44 Aligned_cols=224 Identities=17% Similarity=0.203 Sum_probs=199.4
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHh-hcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQ-QHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|++|||||++|||+++|++|+++| ++|++++|+.++++++.+... ...++.++++|++|.++ ++++++++.+.+
T Consensus 7 k~vlVTGas~gIG~aia~~l~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-v~~~~~~~~~~~ 81 (257)
T 3imf_A 7 KVVIITGGSSGMGKGMATRFAKEG----ARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDD-IQKMIEQIDEKF 81 (257)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHH-HHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHH-HHHHHHHHHHHc
Confidence 799999999999999999999999 899999999998888754443 34578999999999999 999999999998
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+ ++|+||||||.... .++.+.+.++|++.+++|+.++++++++++|.|.++. ..|+||++||..+..
T Consensus 82 g--~id~lv~nAg~~~~-~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~----------~~g~iv~isS~~~~~ 148 (257)
T 3imf_A 82 G--RIDILINNAAGNFI-CPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKG----------IKGNIINMVATYAWD 148 (257)
T ss_dssp S--CCCEEEECCCCCCC-CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT----------CCCEEEEECCGGGGS
T ss_pred C--CCCEEEECCCCCCC-CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhC----------CCcEEEEECchhhcc
Confidence 8 59999999998765 7788899999999999999999999999999996542 479999999999987
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhcc-CCCeEEEEecCcceecCCCCCC------------------CCCchhhHH
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLK-GDKIIATAMHPGWVKTDMGGSN------------------APLEVGAAT 221 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~-~~~i~v~~v~PG~v~t~~~~~~------------------~~~~~~~~~ 221 (248)
+. ++...|+++|+++++|+++|+.|++ ++|||||+|+||+++|++.... ...+|++++
T Consensus 149 ~~---~~~~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA 225 (257)
T 3imf_A 149 AG---PGVIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQSVPLGRLGTPEEIA 225 (257)
T ss_dssp CC---TTCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-------CCSHHHHTTSTTCSCBCHHHHH
T ss_pred CC---CCcHHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCHHHHHHHHhcCCCCCCcCHHHHH
Confidence 76 7889999999999999999999997 7799999999999999975321 134799999
Q ss_pred HHHHHHhhhcccccccceeeeCCee
Q psy11190 222 AGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 222 ~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
+.+++++++.....+|+.+.+||..
T Consensus 226 ~~v~~L~s~~~~~itG~~i~vdGG~ 250 (257)
T 3imf_A 226 GLAYYLCSDEAAYINGTCMTMDGGQ 250 (257)
T ss_dssp HHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred HHHHHHcCchhcCccCCEEEECCCc
Confidence 9999999998889999999999863
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-41 Score=283.69 Aligned_cols=221 Identities=22% Similarity=0.219 Sum_probs=199.9
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||++|||+++|++|+++| ++|++++|+.++++++.+.. +.++.++++|++|.++ ++++++++.+.++
T Consensus 12 k~vlVTGas~gIG~aia~~l~~~G----~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~-v~~~~~~~~~~~g 84 (271)
T 3tzq_B 12 KVAIITGACGGIGLETSRVLARAG----ARVVLADLPETDLAGAAASV--GRGAVHHVVDLTNEVS-VRALIDFTIDTFG 84 (271)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT----CEEEEEECTTSCHHHHHHHH--CTTCEEEECCTTCHHH-HHHHHHHHHHHHS
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC----CEEEEEcCCHHHHHHHHHHh--CCCeEEEECCCCCHHH-HHHHHHHHHHHcC
Confidence 799999999999999999999999 89999999998888775444 5678899999999999 9999999999998
Q ss_pred CCCccEEEeccccCCc-cccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 82 DQGLNVLVNNAGIAAK-FTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
++|+||||||...+ ...+.+.+.++|++.+++|+.+++++++.++|.|.++ +.++||++||..+..
T Consensus 85 --~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-----------~~g~iv~isS~~~~~ 151 (271)
T 3tzq_B 85 --RLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISA-----------GGGAIVNISSATAHA 151 (271)
T ss_dssp --CCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----------TCEEEEEECCGGGTS
T ss_pred --CCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----------CCCEEEEECCHHHcC
Confidence 59999999998733 3567788999999999999999999999999999886 579999999999988
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC----------------CCCchhhHHHHH
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN----------------APLEVGAATAGI 224 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~----------------~~~~~~~~~~~~ 224 (248)
+. ++...|+++|+++++|+++++.|++++||+||+|+||+++|++.... ...+|+++++.+
T Consensus 152 ~~---~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~r~~~p~dvA~~v 228 (271)
T 3tzq_B 152 AY---DMSTAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGLPQPIVDIFATHHLAGRIGEPHEIAELV 228 (271)
T ss_dssp BC---SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC---CHHHHHHHHTTSTTSSCBCHHHHHHHH
T ss_pred CC---CCChHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence 77 78889999999999999999999999999999999999999987621 134799999999
Q ss_pred HHHhhhcccccccceeeeCCe
Q psy11190 225 IQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 225 ~~~~~~~~~~~~g~~~~~~g~ 245 (248)
++++++.....+|+.+.+||.
T Consensus 229 ~~L~s~~~~~itG~~i~vdGG 249 (271)
T 3tzq_B 229 CFLASDRAAFITGQVIAADSG 249 (271)
T ss_dssp HHHHSGGGTTCCSCEEEESTT
T ss_pred HHHhCcccCCcCCCEEEECCC
Confidence 999999888999999999996
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-41 Score=279.82 Aligned_cols=222 Identities=24% Similarity=0.309 Sum_probs=197.0
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||++|||+++|++|+++| .++.|++.+|+.++++++.+.. +.++.++++|++|.++ ++++++++.+.++
T Consensus 3 k~~lVTGas~GIG~aia~~l~~~g--~~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~-v~~~~~~~~~~~g 77 (254)
T 3kzv_A 3 KVILVTGVSRGIGKSIVDVLFSLD--KDTVVYGVARSEAPLKKLKEKY--GDRFFYVVGDITEDSV-LKQLVNAAVKGHG 77 (254)
T ss_dssp CEEEECSTTSHHHHHHHHHHHHHC--SSCEEEEEESCHHHHHHHHHHH--GGGEEEEESCTTSHHH-HHHHHHHHHHHHS
T ss_pred CEEEEECCCchHHHHHHHHHHhcC--CCeEEEEecCCHHHHHHHHHHh--CCceEEEECCCCCHHH-HHHHHHHHHHhcC
Confidence 899999999999999999999986 2379999999988877775443 4578899999999999 9999999999988
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+||||||...+..++.+.+.++|++.+++|+.+++++++.++|.|+++ +|+||++||..+..+
T Consensus 78 --~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~------------~g~iv~isS~~~~~~ 143 (254)
T 3kzv_A 78 --KIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKT------------NGNVVFVSSDACNMY 143 (254)
T ss_dssp --CCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------------TCEEEEECCSCCCCS
T ss_pred --CccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc------------CCeEEEEcCchhccC
Confidence 699999999986555778889999999999999999999999999999874 489999999999887
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC------------------------CCch
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA------------------------PLEV 217 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~------------------------~~~~ 217 (248)
. +++..|+++|+++++|+++|+.|+ +|||||+|+||+++|+|..... ..+|
T Consensus 144 ~---~~~~~Y~asK~a~~~~~~~la~e~--~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p 218 (254)
T 3kzv_A 144 F---SSWGAYGSSKAALNHFAMTLANEE--RQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKENNQLLDS 218 (254)
T ss_dssp S---CCSHHHHHHHHHHHHHHHHHHHHC--TTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHHTTC----C
T ss_pred C---CCcchHHHHHHHHHHHHHHHHhhc--cCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHHhcCCcCCc
Confidence 7 788999999999999999999998 6899999999999999975431 2479
Q ss_pred hhHHHHHHHHhhhc-ccccccceeeeCCeec
Q psy11190 218 GAATAGIIQFIQSL-GEAHNGGFFEYTGKAI 247 (248)
Q Consensus 218 ~~~~~~~~~~~~~~-~~~~~g~~~~~~g~~~ 247 (248)
+++++.+++++++. +...+|+++.+||..+
T Consensus 219 ~dva~~v~~L~s~~~~~~itG~~i~vdg~~~ 249 (254)
T 3kzv_A 219 SVPATVYAKLALHGIPDGVNGQYLSYNDPAL 249 (254)
T ss_dssp HHHHHHHHHHHHHCCCGGGTTCEEETTCGGG
T ss_pred ccHHHHHHHHHhhcccCCCCccEEEecCccc
Confidence 99999999999998 4889999999999764
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-42 Score=287.90 Aligned_cols=227 Identities=28% Similarity=0.367 Sum_probs=200.5
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhh---cCCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQ---HSNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
|++|||||++|||+++|++|+++|+ ..++|++++|+.++++++.+.+.. +.++.++++|++|.++ ++++++++.+
T Consensus 34 k~~lVTGas~GIG~aia~~l~~~G~-~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-v~~~~~~~~~ 111 (287)
T 3rku_A 34 KTVLITGASAGIGKATALEYLEASN-GDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEK-IKPFIENLPQ 111 (287)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGG-HHHHHHTSCG
T ss_pred CEEEEecCCChHHHHHHHHHHHcCC-CCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHH-HHHHHHHHHH
Confidence 7999999999999999999999991 112999999999988887544432 4578899999999999 9999999999
Q ss_pred hhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 79 VVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
.++ ++|+||||||...+..++.+.+.++|++.+++|+.+++++++.++|.|+++ +.|+||++||.++
T Consensus 112 ~~g--~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-----------~~g~IV~isS~~~ 178 (287)
T 3rku_A 112 EFK--DIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAK-----------NSGDIVNLGSIAG 178 (287)
T ss_dssp GGC--SCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----------TCCEEEEECCGGG
T ss_pred hcC--CCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----------CCCeEEEECChhh
Confidence 988 599999999987644778889999999999999999999999999999886 5799999999999
Q ss_pred cccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCC---------------CCCCCchhhHHHH
Q psy11190 159 SIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGG---------------SNAPLEVGAATAG 223 (248)
Q Consensus 159 ~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~---------------~~~~~~~~~~~~~ 223 (248)
..+. ++...|+++|+++++|+++|+.|++++||+||+|+||+++|++.. ...+.+|+|+++.
T Consensus 179 ~~~~---~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~pedvA~~ 255 (287)
T 3rku_A 179 RDAY---PTGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNEEQAKNVYKDTTPLMADDVADL 255 (287)
T ss_dssp TSCC---TTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTTCHHHHHHHHTTSCCEEHHHHHHH
T ss_pred cCCC---CCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccCcHHHHHHhhcccCCCCHHHHHHH
Confidence 8877 788999999999999999999999999999999999999999731 1225689999999
Q ss_pred HHHHhhhcccccccceeeeCCee
Q psy11190 224 IIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 224 ~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
+++++++.....+|+.+.++|..
T Consensus 256 v~~l~s~~~~~i~g~~i~v~~g~ 278 (287)
T 3rku_A 256 IVYATSRKQNTVIADTLIFPTNQ 278 (287)
T ss_dssp HHHHHTSCTTEEEEEEEEEETTE
T ss_pred HHHHhCCCCCeEecceEEeeCCC
Confidence 99999998888999988888753
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-41 Score=283.63 Aligned_cols=227 Identities=22% Similarity=0.307 Sum_probs=187.1
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeec-CchhHHHHH-HHHhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCR-NKDKAVELL-ALAQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r-~~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|++|||||++|||+++|++|+++| ++|++++| +.+.++++. ++...+.++.++++|++|.++ ++++++++.+.
T Consensus 30 k~~lVTGas~GIG~aia~~la~~G----~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~-v~~~~~~~~~~ 104 (280)
T 4da9_A 30 PVAIVTGGRRGIGLGIARALAASG----FDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSS-HQATVDAVVAE 104 (280)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT----CEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGG-HHHHHHHHHHH
T ss_pred CEEEEecCCCHHHHHHHHHHHHCC----CeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHH-HHHHHHHHHHH
Confidence 789999999999999999999999 89999985 666666664 344445689999999999999 99999999999
Q ss_pred hcCCCccEEEeccccCC-ccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 80 VKDQGLNVLVNNAGIAA-KFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
++ ++|+||||||... ...++.+.+.++|++.+++|+.+++++++.++|.|.+++. .+.|+||++||..+
T Consensus 105 ~g--~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~--------~~~g~Iv~isS~~~ 174 (280)
T 4da9_A 105 FG--RIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDA--------RASRSIINITSVSA 174 (280)
T ss_dssp HS--CCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCC--------CCCEEEEEECCC--
T ss_pred cC--CCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCC--------CCCCEEEEEcchhh
Confidence 98 5999999999842 2367788899999999999999999999999999987521 02689999999999
Q ss_pred cccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC----------------CCchhhHHH
Q psy11190 159 SIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA----------------PLEVGAATA 222 (248)
Q Consensus 159 ~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~----------------~~~~~~~~~ 222 (248)
..+. ++...|+++|+++++|+++|+.|++++||+||+|+||+++|++..... ..+|+|+++
T Consensus 175 ~~~~---~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~ 251 (280)
T 4da9_A 175 VMTS---PERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVSGKYDGLIESGLVPMRRWGEPEDIGN 251 (280)
T ss_dssp --------CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC----------------------CCBCHHHHHH
T ss_pred ccCC---CCccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcchhHHHHHhhcCCCcCCcCCHHHHHH
Confidence 8877 788899999999999999999999999999999999999999865421 247999999
Q ss_pred HHHHHhhhcccccccceeeeCCee
Q psy11190 223 GIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 223 ~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
.+++++++.....+|+.+.+||..
T Consensus 252 ~v~~L~s~~~~~itG~~i~vdGG~ 275 (280)
T 4da9_A 252 IVAGLAGGQFGFATGSVIQADGGL 275 (280)
T ss_dssp HHHHHHTSTTGGGTTCEEEESTTC
T ss_pred HHHHHhCccccCCCCCEEEECCCc
Confidence 999999998889999999999863
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-42 Score=287.44 Aligned_cols=223 Identities=20% Similarity=0.265 Sum_probs=200.1
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHH-HHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|++|||||++|||+++|++|+++| ++|++++|+.++++++.+ +...+.++.++++|++|.++ ++.+++++.+.+
T Consensus 25 k~~lVTGas~GIG~aia~~la~~G----~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~-v~~~~~~~~~~~ 99 (279)
T 3sju_A 25 QTAFVTGVSSGIGLAVARTLAARG----IAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDE-VHAAVAAAVERF 99 (279)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHH-HHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHH-HHHHHHHHHHHc
Confidence 799999999999999999999999 899999999988887744 44445689999999999999 999999999998
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhH--HHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLP--LLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~--~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
+ ++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++| .|.++ +.|+||++||.++
T Consensus 100 g--~id~lv~nAg~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~-----------~~g~iV~isS~~~ 165 (279)
T 3sju_A 100 G--PIGILVNSAGRNGG-GETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREA-----------GWGRIVNIASTGG 165 (279)
T ss_dssp C--SCCEEEECCCCCCC-SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHH-----------TCEEEEEECCGGG
T ss_pred C--CCcEEEECCCCCCC-CChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhc-----------CCcEEEEECChhh
Confidence 8 59999999998765 7778889999999999999999999999999 57665 5799999999999
Q ss_pred cccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC--------------------------C
Q psy11190 159 SIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS--------------------------N 212 (248)
Q Consensus 159 ~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~--------------------------~ 212 (248)
..+. ++...|+++|+++++|+++|+.|++++||+||+|+||+++|+|.+. .
T Consensus 166 ~~~~---~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 242 (279)
T 3sju_A 166 KQGV---MYAAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLG 242 (279)
T ss_dssp TSCC---TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTCTTS
T ss_pred ccCC---CCChhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcCCCC
Confidence 8877 7888999999999999999999999999999999999999987421 1
Q ss_pred CCCchhhHHHHHHHHhhhcccccccceeeeCCee
Q psy11190 213 APLEVGAATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
...+|+++++.+++++++.....+|+.+.+||..
T Consensus 243 r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~ 276 (279)
T 3sju_A 243 RYSTPEEVAGLVGYLVTDAAASITAQALNVCGGL 276 (279)
T ss_dssp SCBCHHHHHHHHHHHTSSGGGGCCSCEEEESTTC
T ss_pred CCCCHHHHHHHHHHHhCccccCcCCcEEEECCCc
Confidence 1357999999999999988889999999999964
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-41 Score=287.35 Aligned_cols=223 Identities=24% Similarity=0.295 Sum_probs=200.4
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhh-c-CCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQ-H-SNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|++|||||++|||+++|++|+++| ++|++++|+.++++++.+.+.. + .++.++++|++|.++ ++++++++.+.
T Consensus 42 k~vlVTGas~GIG~aia~~la~~G----~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~-v~~~~~~~~~~ 116 (293)
T 3rih_A 42 RSVLVTGGTKGIGRGIATVFARAG----ANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGS-CADAARTVVDA 116 (293)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT----CEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHH-HHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHH-HHHHHHHHHHH
Confidence 799999999999999999999999 8999999999988887544433 3 478999999999999 99999999999
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
++ ++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|.++ +.++||++||..+.
T Consensus 117 ~g--~iD~lvnnAg~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-----------~~g~iV~isS~~~~ 182 (293)
T 3rih_A 117 FG--ALDVVCANAGIFPE-ARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTAS-----------GRGRVILTSSITGP 182 (293)
T ss_dssp HS--CCCEEEECCCCCCC-CCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHH-----------SSCEEEEECCSBTT
T ss_pred cC--CCCEEEECCCCCCC-CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----------CCCEEEEEeChhhc
Confidence 98 59999999998765 788889999999999999999999999999999886 57999999999986
Q ss_pred -ccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC---------------CCCchhhHHHH
Q psy11190 160 -IEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN---------------APLEVGAATAG 223 (248)
Q Consensus 160 -~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~---------------~~~~~~~~~~~ 223 (248)
.+. ++...|+++|+++++|+++++.|++++||+||+|+||+++|++.... ...+|+++++.
T Consensus 183 ~~~~---~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~ 259 (293)
T 3rih_A 183 VTGY---PGWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDMGEEYISGMARSIPMGMLGSPVDIGHL 259 (293)
T ss_dssp TBBC---TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHTCHHHHHHHHTTSTTSSCBCHHHHHHH
T ss_pred cCCC---CCCHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhccHHHHHHHHhcCCCCCCCCHHHHHHH
Confidence 555 77889999999999999999999999999999999999999864321 13479999999
Q ss_pred HHHHhhhcccccccceeeeCCee
Q psy11190 224 IIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 224 ~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
+++++++.....+|+.+.+||..
T Consensus 260 v~fL~s~~a~~itG~~i~vdGG~ 282 (293)
T 3rih_A 260 AAFLATDEAGYITGQAIVVDGGQ 282 (293)
T ss_dssp HHHHHSGGGTTCCSCEEEESTTT
T ss_pred HHHHhCccccCCCCCEEEECCCc
Confidence 99999998889999999999863
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-41 Score=282.83 Aligned_cols=226 Identities=19% Similarity=0.246 Sum_probs=200.8
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHH-HHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|++|||||++|||+++|++|+++| ++|++++|+.++++++.+ +...+.++.++++|++|.++ ++++++++.+.+
T Consensus 33 k~~lVTGas~GIG~aia~~la~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~-v~~~~~~~~~~~ 107 (276)
T 3r1i_A 33 KRALITGASTGIGKKVALAYAEAG----AQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQ-VRGMLDQMTGEL 107 (276)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT----CEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHH-HHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH-HHHHHHHHHHHc
Confidence 799999999999999999999999 899999999998888744 44445689999999999999 999999999999
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+ ++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|.+++ ..++||++||..+..
T Consensus 108 g--~iD~lvnnAg~~~~-~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~----------~~g~iv~isS~~~~~ 174 (276)
T 3r1i_A 108 G--GIDIAVCNAGIVSV-QAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQG----------LGGTIITTASMSGHI 174 (276)
T ss_dssp S--CCSEEEECCCCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT----------SCEEEEEECCGGGTS
T ss_pred C--CCCEEEECCCCCCC-CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC----------CCcEEEEECchHhcc
Confidence 8 59999999998765 7778889999999999999999999999999998862 258999999998876
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC--------------CCCchhhHHHHHHH
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN--------------APLEVGAATAGIIQ 226 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~--------------~~~~~~~~~~~~~~ 226 (248)
+.. ..+...|+++|+++++|+++++.|++++||+||+|+||+++|++.+.. ...+|+|+++.+++
T Consensus 175 ~~~-~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~f 253 (276)
T 3r1i_A 175 INI-PQQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLADYHALWEPKIPLGRMGRPEELTGLYLY 253 (276)
T ss_dssp CCC-SSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGGGGGHHHHGGGSTTSSCBCGGGSHHHHHH
T ss_pred cCC-CCCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccchHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 531 135678999999999999999999999999999999999999997542 13589999999999
Q ss_pred HhhhcccccccceeeeCCee
Q psy11190 227 FIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 227 ~~~~~~~~~~g~~~~~~g~~ 246 (248)
++++.....+|+.+.+||..
T Consensus 254 L~s~~~~~itG~~i~vdGG~ 273 (276)
T 3r1i_A 254 LASAASSYMTGSDIVIDGGY 273 (276)
T ss_dssp HHSGGGTTCCSCEEEESTTT
T ss_pred HcCccccCccCcEEEECcCc
Confidence 99998899999999999964
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-41 Score=284.38 Aligned_cols=223 Identities=20% Similarity=0.283 Sum_probs=195.7
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeec-CchhHHHHHHHHhh--cCCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCR-NKDKAVELLALAQQ--HSNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r-~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
|++|||||++|||+++|++|+++| ++|++++| +.+.++++.+.... ..++.++++|++|.++ ++++++++.+
T Consensus 26 k~~lVTGas~GIG~~ia~~la~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~-v~~~~~~~~~ 100 (281)
T 3v2h_A 26 KTAVITGSTSGIGLAIARTLAKAG----ANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSE-IADMMAMVAD 100 (281)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTT----CEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHH-HHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC----CEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHH-HHHHHHHHHH
Confidence 799999999999999999999999 89999999 55566666444432 4578999999999999 9999999999
Q ss_pred hhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 79 VVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
.++ ++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|.++ +.|+||++||.++
T Consensus 101 ~~g--~iD~lv~nAg~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-----------~~g~iv~isS~~~ 166 (281)
T 3v2h_A 101 RFG--GADILVNNAGVQFV-EKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKK-----------GWGRIINIASAHG 166 (281)
T ss_dssp HTS--SCSEEEECCCCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----------TCEEEEEECCGGG
T ss_pred HCC--CCCEEEECCCCCCC-CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----------CCCEEEEECCccc
Confidence 988 59999999998765 778888999999999999999999999999999886 5799999999999
Q ss_pred cccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC--------------------------
Q psy11190 159 SIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN-------------------------- 212 (248)
Q Consensus 159 ~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~-------------------------- 212 (248)
..+. ++...|+++|+++++|+++++.|++++||+||+|+||+++|++.+..
T Consensus 167 ~~~~---~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 243 (281)
T 3v2h_A 167 LVAS---PFKSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPT 243 (281)
T ss_dssp TSCC---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC----------------------------CCTT
T ss_pred ccCC---CCchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHHHHhcCCC
Confidence 8877 78889999999999999999999999999999999999999985431
Q ss_pred -CCCchhhHHHHHHHHhhhcccccccceeeeCCee
Q psy11190 213 -APLEVGAATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 213 -~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
...+|+++++.+++++++.....+|+.+.+||..
T Consensus 244 ~r~~~~edvA~~v~~L~s~~a~~itG~~i~vdGG~ 278 (281)
T 3v2h_A 244 KKFITVEQVASLALYLAGDDAAQITGTHVSMDGGW 278 (281)
T ss_dssp CSCBCHHHHHHHHHHHHSSGGGGCCSCEEEESTTG
T ss_pred CCccCHHHHHHHHHHHcCCCcCCCCCcEEEECCCc
Confidence 1347999999999999998889999999999863
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-41 Score=283.57 Aligned_cols=221 Identities=19% Similarity=0.292 Sum_probs=199.3
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||++|||+++|++|+++| ++|++++|+.+.++++.+.. +.++.++++|++|.++ ++++++++.+.++
T Consensus 28 k~vlVTGas~GIG~aia~~l~~~G----~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~-v~~~~~~~~~~~g 100 (277)
T 4dqx_A 28 RVCIVTGGGSGIGRATAELFAKNG----AYVVVADVNEDAAVRVANEI--GSKAFGVRVDVSSAKD-AESMVEKTTAKWG 100 (277)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT----CEEEEEESSHHHHHHHHHHH--CTTEEEEECCTTCHHH-HHHHHHHHHHHHS
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHh--CCceEEEEecCCCHHH-HHHHHHHHHHHcC
Confidence 799999999999999999999999 89999999988877764443 5578899999999999 9999999999988
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|+++ +.|+||++||.++..+
T Consensus 101 --~iD~lv~nAg~~~~-~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-----------~~g~iv~isS~~~~~~ 166 (277)
T 4dqx_A 101 --RVDVLVNNAGFGTT-GNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRN-----------GGGSIINTTSYTATSA 166 (277)
T ss_dssp --CCCEEEECCCCCCC-BCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-----------TCEEEEEECCGGGTSC
T ss_pred --CCCEEEECCCcCCC-CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----------CCcEEEEECchhhCcC
Confidence 59999999998765 778889999999999999999999999999999875 5789999999999877
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC---------------------CCCCchhhH
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS---------------------NAPLEVGAA 220 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~---------------------~~~~~~~~~ 220 (248)
. ++...|+++|+++++|+++++.|++++||+||+|+||+++|++... ....+|+++
T Consensus 167 ~---~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedv 243 (277)
T 4dqx_A 167 I---ADRTAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAVMDRMGTAEEI 243 (277)
T ss_dssp C---TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHTTSTTCSCBCHHHH
T ss_pred C---CCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHHhcCcccCCcCHHHH
Confidence 6 7889999999999999999999999999999999999999997211 113479999
Q ss_pred HHHHHHHhhhcccccccceeeeCCee
Q psy11190 221 TAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 221 ~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
++.+++++++.....+|+.+.+||..
T Consensus 244 A~~v~~L~s~~~~~itG~~i~vdGG~ 269 (277)
T 4dqx_A 244 AEAMLFLASDRSRFATGSILTVDGGS 269 (277)
T ss_dssp HHHHHHHHSGGGTTCCSCEEEESSSS
T ss_pred HHHHHHHhCCccCCCcCCEEEECCch
Confidence 99999999998889999999999864
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-41 Score=284.02 Aligned_cols=223 Identities=23% Similarity=0.352 Sum_probs=199.0
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeec-CchhHHHHHH-HHhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCR-NKDKAVELLA-LAQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r-~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|++|||||++|||+++|++|+++| ++|++.+| +.+.++++.+ +...+.++.++++|++|.++ ++++++++.+.
T Consensus 29 k~vlVTGas~gIG~aia~~la~~G----~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~-v~~~~~~~~~~ 103 (269)
T 4dmm_A 29 RIALVTGASRGIGRAIALELAAAG----AKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESE-VEALFAAVIER 103 (269)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTT----CEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHH-HHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC----CEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHH-HHHHHHHHHHH
Confidence 789999999999999999999999 89999888 5556666643 33345688999999999999 99999999999
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
++ ++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|.++ +.|+||++||.++.
T Consensus 104 ~g--~id~lv~nAg~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-----------~~g~iv~isS~~~~ 169 (269)
T 4dmm_A 104 WG--RLDVLVNNAGITRD-TLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQ-----------RSGRIINIASVVGE 169 (269)
T ss_dssp HS--CCCEEEECCCCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----------TCCEEEEECCHHHH
T ss_pred cC--CCCEEEECCCCCCC-CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----------CCcEEEEECchhhc
Confidence 88 59999999998765 777888999999999999999999999999999886 57999999999998
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC------------CCCchhhHHHHHHHH
Q psy11190 160 IEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN------------APLEVGAATAGIIQF 227 (248)
Q Consensus 160 ~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~------------~~~~~~~~~~~~~~~ 227 (248)
.+. ++...|+++|+++++|+++|+.|++++||+||+|+||+++|+|.... ...+|+++++.++.+
T Consensus 170 ~~~---~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~p~~r~~~~~dvA~~v~~l 246 (269)
T 4dmm_A 170 MGN---PGQANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSELAAEKLLEVIPLGRYGEAAEVAGVVRFL 246 (269)
T ss_dssp HCC---TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHHHHHHHGGGCTTSSCBCHHHHHHHHHHH
T ss_pred CCC---CCchhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccccccHHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence 877 78899999999999999999999999999999999999999997541 246899999999999
Q ss_pred hhh-cccccccceeeeCCee
Q psy11190 228 IQS-LGEAHNGGFFEYTGKA 246 (248)
Q Consensus 228 ~~~-~~~~~~g~~~~~~g~~ 246 (248)
+++ .....+|+.+.+||..
T Consensus 247 ~s~~~~~~itG~~i~vdGG~ 266 (269)
T 4dmm_A 247 AADPAAAYITGQVINIDGGL 266 (269)
T ss_dssp HHCGGGGGCCSCEEEESTTS
T ss_pred hCCcccCCCcCCEEEECCCe
Confidence 988 5678999999999864
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-41 Score=283.64 Aligned_cols=221 Identities=19% Similarity=0.300 Sum_probs=198.6
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHH-HHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELL-ALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|++|||||++|||+++|++|+++| ++|++++|+.++++++. ++...+.++.++++|++|.++ ++.+++.+.+.
T Consensus 34 k~~lVTGas~GIG~aia~~la~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~~~~~~- 107 (275)
T 4imr_A 34 RTALVTGSSRGIGAAIAEGLAGAG----AHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGA-GTDLIERAEAI- 107 (275)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTT----CEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTH-HHHHHHHHHHH-
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC----CEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHH-HHHHHHHHHHh-
Confidence 799999999999999999999999 89999999998888774 444446689999999999999 99999999887
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+ ++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|.++ +.|+||++||..+..
T Consensus 108 g--~iD~lvnnAg~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-----------~~g~Iv~isS~~~~~ 173 (275)
T 4imr_A 108 A--PVDILVINASAQIN-ATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVAR-----------KWGRVVSIGSINQLR 173 (275)
T ss_dssp S--CCCEEEECCCCCCC-BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----------TCEEEEEECCGGGTS
T ss_pred C--CCCEEEECCCCCCC-CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----------CCcEEEEECCHHhCC
Confidence 5 69999999998765 778888999999999999999999999999999886 579999999999887
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC-------------------CCCCchhhHH
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS-------------------NAPLEVGAAT 221 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~-------------------~~~~~~~~~~ 221 (248)
+. ++...|++||+++++|+++++.|++++||+||+|+||+++|++... ....+|++++
T Consensus 174 ~~---~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA 250 (275)
T 4imr_A 174 PK---SVVTAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTLNWMGRAGRPEEMV 250 (275)
T ss_dssp CC---TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHHSTTCSCBCGGGGH
T ss_pred CC---CCchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccccccChHHHHHHHhhcCccCCCcCHHHHH
Confidence 65 6677899999999999999999999999999999999999997432 1135799999
Q ss_pred HHHHHHhhhcccccccceeeeCCe
Q psy11190 222 AGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 222 ~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
+.+++++++.....+|+.+.+||.
T Consensus 251 ~~v~fL~s~~a~~itG~~i~vdGG 274 (275)
T 4imr_A 251 GAALFLASEACSFMTGETIFLTGG 274 (275)
T ss_dssp HHHHHHHSGGGTTCCSCEEEESSC
T ss_pred HHHHHHcCcccCCCCCCEEEeCCC
Confidence 999999999889999999999985
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-41 Score=281.23 Aligned_cols=218 Identities=21% Similarity=0.336 Sum_probs=197.0
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||++|||+++|++|+++| ++|++++|+.++++++.+.. +.++.++++|++|.++ ++.+++++.+.++
T Consensus 9 k~~lVTGas~gIG~a~a~~l~~~G----~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~-v~~~~~~~~~~~g 81 (255)
T 4eso_A 9 KKAIVIGGTHGMGLATVRRLVEGG----AEVLLTGRNESNIARIREEF--GPRVHALRSDIADLNE-IAVLGAAAGQTLG 81 (255)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHH--GGGEEEEECCTTCHHH-HHHHHHHHHHHHS
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHh--CCcceEEEccCCCHHH-HHHHHHHHHHHhC
Confidence 799999999999999999999999 89999999988877775443 4578899999999999 9999999999988
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|++ .|+||++||.++..+
T Consensus 82 --~id~lv~nAg~~~~-~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~-------------~g~iv~isS~~~~~~ 145 (255)
T 4eso_A 82 --AIDLLHINAGVSEL-EPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIRE-------------GGSIVFTSSVADEGG 145 (255)
T ss_dssp --SEEEEEECCCCCCC-BCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE-------------EEEEEEECCGGGSSB
T ss_pred --CCCEEEECCCCCCC-CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhc-------------CCEEEEECChhhcCC
Confidence 59999999998765 78888999999999999999999999999999854 579999999999887
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC---------------------CCchhhH
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA---------------------PLEVGAA 220 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~---------------------~~~~~~~ 220 (248)
. +++..|+++|+++++|+++|+.|++++||+||+|+||+++|++..... ..+|+|+
T Consensus 146 ~---~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedv 222 (255)
T 4eso_A 146 H---PGMSVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPMKRNGTADEV 222 (255)
T ss_dssp C---TTBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHSTTSSCBCHHHH
T ss_pred C---CCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhccCCCCCCcCHHHH
Confidence 7 788999999999999999999999999999999999999999865311 2479999
Q ss_pred HHHHHHHhhhcccccccceeeeCCee
Q psy11190 221 TAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 221 ~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
++.+++++++ ....+|+.+.+||..
T Consensus 223 A~~v~~L~s~-~~~itG~~i~vdGG~ 247 (255)
T 4eso_A 223 ARAVLFLAFE-ATFTTGAKLAVDGGL 247 (255)
T ss_dssp HHHHHHHHHT-CTTCCSCEEEESTTT
T ss_pred HHHHHHHcCc-CcCccCCEEEECCCc
Confidence 9999999988 888999999999863
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-41 Score=284.87 Aligned_cols=221 Identities=22% Similarity=0.287 Sum_probs=200.5
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||++|||+++|++|+++| ++|++++|+.++++++.+.. +.++.++++|++|.++ ++++++++.+.++
T Consensus 30 k~vlVTGas~gIG~aia~~la~~G----~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~-v~~~~~~~~~~~g 102 (277)
T 3gvc_A 30 KVAIVTGAGAGIGLAVARRLADEG----CHVLCADIDGDAADAAATKI--GCGAAACRVDVSDEQQ-IIAMVDACVAAFG 102 (277)
T ss_dssp CEEEETTTTSTHHHHHHHHHHHTT----CEEEEEESSHHHHHHHHHHH--CSSCEEEECCTTCHHH-HHHHHHHHHHHHS
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHc--CCcceEEEecCCCHHH-HHHHHHHHHHHcC
Confidence 789999999999999999999999 89999999988877765443 5678999999999999 9999999999998
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|.++ +.|+||++||..+..+
T Consensus 103 --~iD~lvnnAg~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-----------~~g~Iv~isS~~~~~~ 168 (277)
T 3gvc_A 103 --GVDKLVANAGVVHL-ASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIER-----------GGGAIVNLSSLAGQVA 168 (277)
T ss_dssp --SCCEEEECCCCCCC-BCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----------TCEEEEEECCGGGTSC
T ss_pred --CCCEEEECCCCCCC-CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----------CCcEEEEEcchhhccC
Confidence 59999999998865 778889999999999999999999999999999886 5799999999999887
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC----------------------CCCCchhh
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS----------------------NAPLEVGA 219 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~----------------------~~~~~~~~ 219 (248)
. ++...|+++|+++++|+++++.|++++||+||+|+||+++|++.+. ....+|+|
T Consensus 169 ~---~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ped 245 (277)
T 3gvc_A 169 V---GGTGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIARLQGRMAAPEE 245 (277)
T ss_dssp C---TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTCC------CCHHHHHHHHHSSCBCHHH
T ss_pred C---CCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHHhhhcchhhHHHHhhhhhhhccccCCCCHHH
Confidence 7 7889999999999999999999999999999999999999987321 01358999
Q ss_pred HHHHHHHHhhhcccccccceeeeCCee
Q psy11190 220 ATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 220 ~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
+++.+++++++.....+|+.+.+||..
T Consensus 246 vA~~v~~L~s~~a~~itG~~i~vdGG~ 272 (277)
T 3gvc_A 246 MAGIVVFLLSDDASMITGTTQIADGGT 272 (277)
T ss_dssp HHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHHHHHcCCccCCccCcEEEECCcc
Confidence 999999999998899999999999964
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-41 Score=284.49 Aligned_cols=222 Identities=23% Similarity=0.278 Sum_probs=192.3
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEe-ecCchhHHHHHHH-HhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFAT-CRNKDKAVELLAL-AQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~-~r~~~~~~~~~~~-~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|++|||||++|||+++|++|+++| ++|++. .|+.+.++++.+. ...+.++.++++|++|.++ ++++++++.+.
T Consensus 28 k~~lVTGas~GIG~aia~~la~~G----~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-v~~~~~~~~~~ 102 (267)
T 3u5t_A 28 KVAIVTGASRGIGAAIAARLASDG----FTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAA-VRRLFATAEEA 102 (267)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHHT----CEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHH-HHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC----CEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH-HHHHHHHHHHH
Confidence 789999999999999999999999 889887 5566666666443 3445688999999999999 99999999999
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
++ ++|+||||||+... .++.+.+.++|++.+++|+.+++++++.++|.|++ .|+||++||..+.
T Consensus 103 ~g--~iD~lvnnAG~~~~-~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~-------------~g~iv~isS~~~~ 166 (267)
T 3u5t_A 103 FG--GVDVLVNNAGIMPL-TTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRV-------------GGRIINMSTSQVG 166 (267)
T ss_dssp HS--CEEEEEECCCCCCC-CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEE-------------EEEEEEECCTHHH
T ss_pred cC--CCCEEEECCCCCCC-CChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-------------CCeEEEEeChhhc
Confidence 88 69999999998765 77888899999999999999999999999999854 5899999999988
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC----------------CCCchhhHHHH
Q psy11190 160 IEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN----------------APLEVGAATAG 223 (248)
Q Consensus 160 ~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~----------------~~~~~~~~~~~ 223 (248)
.+. +++..|+++|+++++|+++|+.|++++||+||+|+||+++|++.... ...+|+++++.
T Consensus 167 ~~~---~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~ 243 (267)
T 3u5t_A 167 LLH---PSYGIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGKSDEVRDRFAKLAPLERLGTPQDIAGA 243 (267)
T ss_dssp HCC---TTCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC-----------CHHHHHTSSTTCSCBCHHHHHHH
T ss_pred cCC---CCchHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence 776 78889999999999999999999999999999999999999986431 13479999999
Q ss_pred HHHHhhhcccccccceeeeCCeec
Q psy11190 224 IIQFIQSLGEAHNGGFFEYTGKAI 247 (248)
Q Consensus 224 ~~~~~~~~~~~~~g~~~~~~g~~~ 247 (248)
+++++++.....+|+.+.+||..+
T Consensus 244 v~~L~s~~~~~itG~~i~vdGG~~ 267 (267)
T 3u5t_A 244 VAFLAGPDGAWVNGQVLRANGGII 267 (267)
T ss_dssp HHHHHSTTTTTCCSEEEEESSSCC
T ss_pred HHHHhCccccCccCCEEEeCCCcC
Confidence 999999888899999999999754
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-41 Score=284.14 Aligned_cols=221 Identities=21% Similarity=0.318 Sum_probs=190.7
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||++|||+++|++|+++| ++|++.+|+.++++++.+.. +.++.++++|++|.++ ++++++++.+.++
T Consensus 28 k~vlVTGas~gIG~aia~~la~~G----~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~-v~~~~~~~~~~~g 100 (266)
T 3grp_A 28 RKALVTGATGGIGEAIARCFHAQG----AIVGLHGTREDKLKEIAADL--GKDVFVFSANLSDRKS-IKQLAEVAEREME 100 (266)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHH--CSSEEEEECCTTSHHH-HHHHHHHHHHHHT
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHh--CCceEEEEeecCCHHH-HHHHHHHHHHHcC
Confidence 799999999999999999999999 89999999988877764433 5578999999999999 9999999999988
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|.++ +.|+||++||.++..+
T Consensus 101 --~iD~lvnnAg~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-----------~~g~Iv~isS~~~~~~ 166 (266)
T 3grp_A 101 --GIDILVNNAGITRD-GLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRR-----------RYGRIINITSIVGVVG 166 (266)
T ss_dssp --SCCEEEECCCCC------CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----------TCEEEEEECCC-----
T ss_pred --CCCEEEECCCCCCC-CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----------CCcEEEEECCHHHcCC
Confidence 59999999998765 777888999999999999999999999999999886 5799999999999887
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC---------------CCchhhHHHHHHH
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA---------------PLEVGAATAGIIQ 226 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~---------------~~~~~~~~~~~~~ 226 (248)
. ++...|+++|+++++|+++++.|++++||+||+|+||+++|++.+... ...|+++++.+++
T Consensus 167 ~---~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~~edvA~~v~~ 243 (266)
T 3grp_A 167 N---PGQTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKLNEKQKEAIMAMIPMKRMGIGEEIAFATVY 243 (266)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTCCHHHHHHHHTTCTTCSCBCHHHHHHHHHH
T ss_pred C---CCchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 7 788899999999999999999999999999999999999999754321 3479999999999
Q ss_pred HhhhcccccccceeeeCCee
Q psy11190 227 FIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 227 ~~~~~~~~~~g~~~~~~g~~ 246 (248)
++++.....+|+.+.+||..
T Consensus 244 L~s~~~~~itG~~i~vdGG~ 263 (266)
T 3grp_A 244 LASDEAAYLTGQTLHINGGM 263 (266)
T ss_dssp HHSGGGTTCCSCEEEESTTC
T ss_pred HhCccccCccCCEEEECCCe
Confidence 99998889999999999864
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-41 Score=277.42 Aligned_cols=223 Identities=21% Similarity=0.325 Sum_probs=202.1
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHH-hhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALA-QQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|++|||||++|||+++|++|+++| ++|++++|+.++++++.+.. ..+.++.++++|++|.++ ++++++++.+.+
T Consensus 6 k~vlITGas~gIG~~~a~~l~~~G----~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~~ 80 (247)
T 3lyl_A 6 KVALVTGASRGIGFEVAHALASKG----ATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIES-IQNFFAEIKAEN 80 (247)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTT----CEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHH-HHHHHHHHHHTT
T ss_pred CEEEEECCCChHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHH-HHHHHHHHHHHc
Confidence 799999999999999999999999 89999999998888874443 345688999999999999 999999999988
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+ ++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|.++ +.++||++||..+..
T Consensus 81 ~--~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----------~~g~iv~isS~~~~~ 146 (247)
T 3lyl_A 81 L--AIDILVNNAGITRD-NLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKK-----------RWGRIISIGSVVGSA 146 (247)
T ss_dssp C--CCSEEEECCCCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----------TCEEEEEECCTHHHH
T ss_pred C--CCCEEEECCCCCCC-CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----------CCeEEEEEcchhhcc
Confidence 7 59999999998765 777788999999999999999999999999999886 578999999999887
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC---------------CCchhhHHHHHH
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA---------------PLEVGAATAGII 225 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~---------------~~~~~~~~~~~~ 225 (248)
+. ++...|+++|+++++|+++++.|++++||+||+|+||+++|++.+... ..+|+++++.++
T Consensus 147 ~~---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~ 223 (247)
T 3lyl_A 147 GN---PGQTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKLTDEQKSFIATKIPSGQIGEPKDIAAAVA 223 (247)
T ss_dssp CC---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTSCHHHHHHHHTTSTTCCCBCHHHHHHHHH
T ss_pred CC---CCcHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhccHHHHHHHhhcCCCCCCcCHHHHHHHHH
Confidence 76 788999999999999999999999999999999999999999976532 357999999999
Q ss_pred HHhhhcccccccceeeeCCee
Q psy11190 226 QFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 226 ~~~~~~~~~~~g~~~~~~g~~ 246 (248)
.++++.....+|+.+.++|..
T Consensus 224 ~l~s~~~~~~tG~~i~vdgG~ 244 (247)
T 3lyl_A 224 FLASEEAKYITGQTLHVNGGM 244 (247)
T ss_dssp HHHSGGGTTCCSCEEEESTTS
T ss_pred HHhCCCcCCccCCEEEECCCE
Confidence 999988888999999999864
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-41 Score=278.37 Aligned_cols=217 Identities=16% Similarity=0.151 Sum_probs=185.7
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHH-HHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|++|||||++|||+++|++|+++| ++|++++|+.++++++.+ +...+.++.++++|++|.++ ++.+++++.+.
T Consensus 8 k~vlVTGas~GIG~aia~~l~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-v~~~~~~~~~~- 81 (252)
T 3h7a_A 8 ATVAVIGAGDYIGAEIAKKFAAEG----FTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDE-VTAFLNAADAH- 81 (252)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHTT----CEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHH-HHHHHHHHHHH-
T ss_pred CEEEEECCCchHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHH-HHHHHHHHHhh-
Confidence 789999999999999999999999 899999999999888844 44445688999999999999 99999999988
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+ ++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|+++ +.|+||++||.++..
T Consensus 82 g--~id~lv~nAg~~~~-~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----------~~g~iv~isS~~~~~ 147 (252)
T 3h7a_A 82 A--PLEVTIFNVGANVN-FPILETTDRVFRKVWEMACWAGFVSGRESARLMLAH-----------GQGKIFFTGATASLR 147 (252)
T ss_dssp S--CEEEEEECCCCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----------TCEEEEEEEEGGGTC
T ss_pred C--CceEEEECCCcCCC-CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----------CCcEEEEECCHHHcC
Confidence 6 69999999998775 778889999999999999999999999999999986 579999999999988
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEE-EEecCcceecCCCCCC--------------CCCchhhHHHHHH
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIA-TAMHPGWVKTDMGGSN--------------APLEVGAATAGII 225 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v-~~v~PG~v~t~~~~~~--------------~~~~~~~~~~~~~ 225 (248)
+. ++...|+++|+++++|+++|+.|++++||+| |+|+||+++|+|.+.. ...+|+++++.++
T Consensus 148 ~~---~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~~~ 224 (252)
T 3h7a_A 148 GG---SGFAAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERREQMFGKDALANPDLLMPPAAVAGAYW 224 (252)
T ss_dssp CC---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC---------------------------CCHHHHHHHHH
T ss_pred CC---CCCccHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhccchhhhhhhhhcCCccCCCHHHHHHHHH
Confidence 77 8889999999999999999999999999999 9999999999987542 1468999999999
Q ss_pred HHhhhcccccccceee
Q psy11190 226 QFIQSLGEAHNGGFFE 241 (248)
Q Consensus 226 ~~~~~~~~~~~g~~~~ 241 (248)
++++++.....+++..
T Consensus 225 ~l~s~~~~~~~~~i~~ 240 (252)
T 3h7a_A 225 QLYQQPKSAWTFEMEI 240 (252)
T ss_dssp HHHHCCGGGBCSEEEE
T ss_pred HHHhCchhcceeeEEe
Confidence 9999877777777654
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-41 Score=286.24 Aligned_cols=224 Identities=19% Similarity=0.250 Sum_probs=200.0
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhh-cC---CceeEEeeccCCchhhhhHHHHhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQ-HS---NLHVIELDVTDFSKQQDVLFKDIS 77 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~-~~---~~~~~~~D~~~~~~~v~~~~~~i~ 77 (248)
|++|||||++|||+++|++|+++| ++|++++|+.+++++..+.+.. +. ++.++++|++|.++ ++++++++.
T Consensus 12 k~vlVTGas~gIG~aia~~l~~~G----~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~-v~~~~~~~~ 86 (281)
T 3svt_A 12 RTYLVTGGGSGIGKGVAAGLVAAG----ASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDE-TARAVDAVT 86 (281)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHH-HHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHH-HHHHHHHHH
Confidence 799999999999999999999999 8999999999888877444332 22 68899999999999 999999999
Q ss_pred hhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCC
Q psy11190 78 DVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIM 157 (248)
Q Consensus 78 ~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~ 157 (248)
+.++ ++|+||||||......++.+.+.++|++.+++|+.++++++++++|.|.++ +.|+||++||.+
T Consensus 87 ~~~g--~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-----------~~g~iv~isS~~ 153 (281)
T 3svt_A 87 AWHG--RLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRG-----------GGGSFVGISSIA 153 (281)
T ss_dssp HHHS--CCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----------TCEEEEEECCHH
T ss_pred HHcC--CCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----------CCcEEEEEeCHH
Confidence 9988 599999999985444677888999999999999999999999999999875 578999999999
Q ss_pred CcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC-----------------CCCchhhH
Q psy11190 158 GSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN-----------------APLEVGAA 220 (248)
Q Consensus 158 ~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~-----------------~~~~~~~~ 220 (248)
+..+. ++...|++||+++++|+++++.|++++||+||+|+||+++|++.+.. ...+|+++
T Consensus 154 ~~~~~---~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dv 230 (281)
T 3svt_A 154 ASNTH---RWFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPLPRQGEVEDV 230 (281)
T ss_dssp HHSCC---TTCTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHHHCSSSSCBCHHHH
T ss_pred HcCCC---CCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccCHHHHHHHHhcCCCCCCCCHHHH
Confidence 88776 77889999999999999999999999999999999999999986431 13479999
Q ss_pred HHHHHHHhhhcccccccceeeeCCee
Q psy11190 221 TAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 221 ~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
++.+++++++.....+|+.+.++|..
T Consensus 231 a~~~~~l~s~~~~~itG~~~~vdgG~ 256 (281)
T 3svt_A 231 ANMAMFLLSDAASFVTGQVINVDGGQ 256 (281)
T ss_dssp HHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHHHHhCcccCCCCCCEEEeCCCh
Confidence 99999999988888999999999863
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-41 Score=276.04 Aligned_cols=217 Identities=17% Similarity=0.215 Sum_probs=185.1
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
||++|||||++|||+++|++|+++| ++|++++|+.++++++.+... .++.++++|++|.++ ++++++++.+.+
T Consensus 3 ~k~vlVTGas~GIG~a~a~~l~~~G----~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~-v~~~~~~~~~~~ 75 (235)
T 3l6e_A 3 LGHIIVTGAGSGLGRALTIGLVERG----HQVSMMGRRYQRLQQQELLLG--NAVIGIVADLAHHED-VDVAFAAAVEWG 75 (235)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHHG--GGEEEEECCTTSHHH-HHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHHhc--CCceEEECCCCCHHH-HHHHHHHHHHhc
Confidence 5899999999999999999999999 899999999988887755443 358899999999999 999999999998
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+ ++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|.++ .++||++||..+..
T Consensus 76 g--~id~lvnnAg~~~~-~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~------------~~~iv~isS~~~~~ 140 (235)
T 3l6e_A 76 G--LPELVLHCAGTGEF-GPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGER------------GGVLANVLSSAAQV 140 (235)
T ss_dssp C--SCSEEEEECCCC-------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTT------------CEEEEEECCEECCS
T ss_pred C--CCcEEEECCCCCCC-CChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc------------CCEEEEEeCHHhcC
Confidence 8 59999999998764 778889999999999999999999999999999873 46999999999988
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC------CCCchhhHHHHHHHHhhhc-cc
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN------APLEVGAATAGIIQFIQSL-GE 233 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~------~~~~~~~~~~~~~~~~~~~-~~ 233 (248)
+. ++...|++||+++++|+++|+.|++++||+||+|+||+++|+|.... ...+|+++++.++++++.+ ..
T Consensus 141 ~~---~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~pedvA~~v~~l~~~~~~~ 217 (235)
T 3l6e_A 141 GK---ANESLYCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNTDHVDPSGFMTPEDAAAYMLDALEARSSC 217 (235)
T ss_dssp SC---SSHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC-----------CBCHHHHHHHHHHHTCCCSSE
T ss_pred CC---CCCcHHHHHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhccCCCCCcCCCCHHHHHHHHHHHHhCCCCc
Confidence 77 78889999999999999999999999999999999999999997553 2468999999999999854 34
Q ss_pred ccccceeee
Q psy11190 234 AHNGGFFEY 242 (248)
Q Consensus 234 ~~~g~~~~~ 242 (248)
..+|-.+..
T Consensus 218 ~i~~i~~~~ 226 (235)
T 3l6e_A 218 HVTDLFIGR 226 (235)
T ss_dssp EEEEEEEEE
T ss_pred ceeeEEEec
Confidence 455555543
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-41 Score=279.04 Aligned_cols=218 Identities=24% Similarity=0.307 Sum_probs=188.5
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHH-HHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|++|||||++|||+++|++|+++| ++|++++|+.++++++.+ +...+.++.++++|++|.++ ++.+++++.+.+
T Consensus 5 k~~lVTGas~GIG~aia~~la~~G----~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~-v~~~~~~~~~~~ 79 (264)
T 3tfo_A 5 KVILITGASGGIGEGIARELGVAG----AKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHS-VAAFAQAAVDTW 79 (264)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTT----CEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHH-HHHHHHHHHHHH
T ss_pred CEEEEeCCccHHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHH-HHHHHHHHHHHc
Confidence 799999999999999999999999 899999999998888744 44445678899999999999 999999999998
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+ ++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|+++ +.|+||++||..+..
T Consensus 80 g--~iD~lVnnAG~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-----------~~g~IV~isS~~~~~ 145 (264)
T 3tfo_A 80 G--RIDVLVNNAGVMPL-SPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQ-----------RSGQIINIGSIGALS 145 (264)
T ss_dssp S--CCCEEEECCCCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----------TCEEEEEECCGGGTC
T ss_pred C--CCCEEEECCCCCCC-CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-----------CCeEEEEEcCHHHcc
Confidence 8 59999999998765 778889999999999999999999999999999886 579999999999988
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC--------------CCchhhHHHHHHH
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA--------------PLEVGAATAGIIQ 226 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~--------------~~~~~~~~~~~~~ 226 (248)
+. ++...|+++|+++.+|+++|+.|+ + |||||+|+||+++|+|..... +.+|+++++.+++
T Consensus 146 ~~---~~~~~Y~asKaal~~l~~~la~e~-~-gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~~ 220 (264)
T 3tfo_A 146 VV---PTAAVYCATKFAVRAISDGLRQES-T-NIRVTCVNPGVVESELAGTITHEETMAAMDTYRAIALQPADIARAVRQ 220 (264)
T ss_dssp CC---TTCHHHHHHHHHHHHHHHHHHHHC-S-SEEEEEEEECCC-----------------------CCCHHHHHHHHHH
T ss_pred cC---CCChhHHHHHHHHHHHHHHHHHhC-C-CCEEEEEecCCCcCcccccccchhHHHHHHhhhccCCCHHHHHHHHHH
Confidence 77 788999999999999999999998 5 999999999999999864321 3689999999999
Q ss_pred HhhhcccccccceeeeC
Q psy11190 227 FIQSLGEAHNGGFFEYT 243 (248)
Q Consensus 227 ~~~~~~~~~~g~~~~~~ 243 (248)
++++.....+++.+-..
T Consensus 221 l~s~~~~~~~~~i~i~p 237 (264)
T 3tfo_A 221 VIEAPQSVDTTEITIRP 237 (264)
T ss_dssp HHHSCTTEEEEEEEEEE
T ss_pred HhcCCccCccceEEEec
Confidence 99998777777665443
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-41 Score=279.69 Aligned_cols=222 Identities=23% Similarity=0.248 Sum_probs=199.4
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||++|||+++|++|+++| ++|++++|+.++++++.+.. ..++.++++|++|.++ ++++++++.+.++
T Consensus 9 k~vlVTGas~gIG~~ia~~l~~~G----~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~-v~~~~~~~~~~~g 81 (259)
T 4e6p_A 9 KSALITGSARGIGRAFAEAYVREG----ATVAIADIDIERARQAAAEI--GPAAYAVQMDVTRQDS-IDAAIAATVEHAG 81 (259)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHH--CTTEEEEECCTTCHHH-HHHHHHHHHHHSS
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHh--CCCceEEEeeCCCHHH-HHHHHHHHHHHcC
Confidence 789999999999999999999999 89999999988877765443 4578899999999999 9999999999988
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|.+++ ..|+||++||.++..+
T Consensus 82 --~id~lv~~Ag~~~~-~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~----------~~g~iv~isS~~~~~~ 148 (259)
T 4e6p_A 82 --GLDILVNNAALFDL-APIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQG----------RGGKIINMASQAGRRG 148 (259)
T ss_dssp --SCCEEEECCCCCCC-BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT----------SCEEEEEECCGGGTSC
T ss_pred --CCCEEEECCCcCCC-CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC----------CCeEEEEECChhhccC
Confidence 59999999998765 7788889999999999999999999999999998762 3689999999999887
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC--------------------------CCC
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN--------------------------APL 215 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~--------------------------~~~ 215 (248)
. ++...|+++|+++++|+++++.|++++||+||+|+||+++|++.+.. ...
T Consensus 149 ~---~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~ 225 (259)
T 4e6p_A 149 E---ALVAIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRMG 225 (259)
T ss_dssp C---TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCB
T ss_pred C---CCChHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhhhhhhhhhhccCChHHHHHHHhccCCCCCCc
Confidence 6 78889999999999999999999999999999999999999974321 145
Q ss_pred chhhHHHHHHHHhhhcccccccceeeeCCee
Q psy11190 216 EVGAATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
+|+|+++.+++++++.....+|+.+.++|..
T Consensus 226 ~~~dva~~v~~L~s~~~~~itG~~i~vdgG~ 256 (259)
T 4e6p_A 226 TAEDLTGMAIFLASAESDYIVSQTYNVDGGN 256 (259)
T ss_dssp CTHHHHHHHHHTTSGGGTTCCSCEEEESTTS
T ss_pred CHHHHHHHHHHHhCCccCCCCCCEEEECcCh
Confidence 8999999999999988889999999999863
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-41 Score=281.24 Aligned_cols=223 Identities=17% Similarity=0.225 Sum_probs=198.9
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHH-HHh-hcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQ-QHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~-~~~-~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|++|||||++|||+++|++|+++| ++|++++|+.+++++..+ +.. .+.++.++++|++|.++ ++++++++.+.
T Consensus 28 k~~lVTGas~GIG~aia~~l~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-v~~~~~~~~~~ 102 (277)
T 4fc7_A 28 KVAFITGGGSGIGFRIAEIFMRHG----CHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPA-VMAAVDQALKE 102 (277)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTT----CEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHH-HHHHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHH-HHHHHHHHHHH
Confidence 799999999999999999999999 899999999888777643 322 25688999999999999 99999999999
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
++ ++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|.++ +.|+||++||..+.
T Consensus 103 ~g--~id~lv~nAg~~~~-~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-----------~~g~iv~isS~~~~ 168 (277)
T 4fc7_A 103 FG--RIDILINCAAGNFL-CPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRD-----------HGGVIVNITATLGN 168 (277)
T ss_dssp HS--CCCEEEECCCCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHH-----------HCEEEEEECCSHHH
T ss_pred cC--CCCEEEECCcCCCC-CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----------CCCEEEEECchhhC
Confidence 88 69999999998765 777888999999999999999999999999998876 47899999999998
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC------------------CCCCchhhHH
Q psy11190 160 IEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS------------------NAPLEVGAAT 221 (248)
Q Consensus 160 ~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~------------------~~~~~~~~~~ 221 (248)
.+. ++...|+++|+++++|+++++.|++++||+||+|+||+++|++... ....+|+|++
T Consensus 169 ~~~---~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA 245 (277)
T 4fc7_A 169 RGQ---ALQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQRLGNKTEIA 245 (277)
T ss_dssp HTC---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHTSTTSSCBCHHHHH
T ss_pred CCC---CCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCCHHHHHHHhccCCCCCCcCHHHHH
Confidence 776 7889999999999999999999999999999999999999985211 1145799999
Q ss_pred HHHHHHhhhcccccccceeeeCCee
Q psy11190 222 AGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 222 ~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
+.+++++++.....+|+.+.+||..
T Consensus 246 ~~v~fL~s~~~~~itG~~i~vdGG~ 270 (277)
T 4fc7_A 246 HSVLYLASPLASYVTGAVLVADGGA 270 (277)
T ss_dssp HHHHHHHSGGGTTCCSCEEEESTTH
T ss_pred HHHHHHcCCccCCcCCCEEEECCCc
Confidence 9999999988889999999999863
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-40 Score=274.97 Aligned_cols=223 Identities=24% Similarity=0.346 Sum_probs=197.7
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeec-CchhHHHHHHHH-hhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCR-NKDKAVELLALA-QQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r-~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|++|||||++|||++++++|+++| ++|++++| +.++++++.+.. ..+.++.++++|++|.++ ++++++++.+.
T Consensus 5 k~vlVTGas~giG~~ia~~l~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~ 79 (246)
T 2uvd_A 5 KVALVTGASRGIGRAIAIDLAKQG----ANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAED-VTNMVKQTVDV 79 (246)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTT----CEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH-HHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC----CEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHH-HHHHHHHHHHH
Confidence 789999999999999999999999 89999999 777777664333 335578899999999999 99999999999
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
++ ++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|+++ +.++||++||.++.
T Consensus 80 ~g--~id~lv~nAg~~~~-~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----------~~g~iv~isS~~~~ 145 (246)
T 2uvd_A 80 FG--QVDILVNNAGVTKD-NLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQ-----------RHGRIVNIASVVGV 145 (246)
T ss_dssp HS--CCCEEEECCCCCCC-BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----------TCEEEEEECCTHHH
T ss_pred cC--CCCEEEECCCCCCC-CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----------CCcEEEEECCHHhc
Confidence 87 59999999998754 677788999999999999999999999999999875 57899999999887
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC---------------CCchhhHHHHH
Q psy11190 160 IEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA---------------PLEVGAATAGI 224 (248)
Q Consensus 160 ~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~---------------~~~~~~~~~~~ 224 (248)
.+. ++...|+++|+++++|+++++.|++++||+||+|+||+++|++..... ..+|+++++.+
T Consensus 146 ~~~---~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~ 222 (246)
T 2uvd_A 146 TGN---PGQANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLDENIKAEMLKLIPAAQFGEAQDIANAV 222 (246)
T ss_dssp HCC---TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCCTTHHHHHHHTCTTCSCBCHHHHHHHH
T ss_pred CCC---CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhcCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence 766 778899999999999999999999999999999999999999865321 34799999999
Q ss_pred HHHhhhcccccccceeeeCCee
Q psy11190 225 IQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 225 ~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
+.++++.....+|+.+.++|..
T Consensus 223 ~~l~s~~~~~~tG~~~~vdgG~ 244 (246)
T 2uvd_A 223 TFFASDQSKYITGQTLNVDGGM 244 (246)
T ss_dssp HHHHSGGGTTCCSCEEEESTTS
T ss_pred HHHcCchhcCCCCCEEEECcCc
Confidence 9999887788999999999863
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-41 Score=286.15 Aligned_cols=224 Identities=21% Similarity=0.262 Sum_probs=197.3
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecC------------chhHHHHHH-HHhhcCCceeEEeeccCCchh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRN------------KDKAVELLA-LAQQHSNLHVIELDVTDFSKQ 68 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~------------~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~ 68 (248)
|++|||||++|||+++|++|+++| ++|++++|+ .++++++.+ +...+.++.++++|++|.++
T Consensus 47 k~~lVTGas~GIG~aia~~la~~G----~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~- 121 (317)
T 3oec_A 47 KVAFITGAARGQGRTHAVRLAQDG----ADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLAS- 121 (317)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTT----CEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH-
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC----CeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHH-
Confidence 789999999999999999999999 899999886 444555533 33345688999999999999
Q ss_pred hhhHHHHhhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCc
Q psy11190 69 QDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRA 148 (248)
Q Consensus 69 v~~~~~~i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~ 148 (248)
++.+++++.+.++ ++|+||||||+... .++.+.+.++|++.+++|+.+++++++.++|.|.+++ ..|
T Consensus 122 v~~~~~~~~~~~g--~iD~lVnnAg~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~----------~~g 188 (317)
T 3oec_A 122 LQAVVDEALAEFG--HIDILVSNVGISNQ-GEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERG----------QGG 188 (317)
T ss_dssp HHHHHHHHHHHHS--CCCEEEECCCCCCC-BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTC----------SCE
T ss_pred HHHHHHHHHHHcC--CCCEEEECCCCCCC-CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC----------CCC
Confidence 9999999999988 69999999998875 7788899999999999999999999999999998752 368
Q ss_pred eEEEeecCCCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC-----------------
Q psy11190 149 AIVNVSSIMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS----------------- 211 (248)
Q Consensus 149 ~iv~vss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~----------------- 211 (248)
+||++||.++..+. ++...|+++|+++++|+++|+.|++++||+||+|+||+++|++...
T Consensus 189 ~Iv~isS~~~~~~~---~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~ 265 (317)
T 3oec_A 189 SVIFVSSTVGLRGA---PGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTRE 265 (317)
T ss_dssp EEEEECCGGGSSCC---TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHHHHHHHCTTCSSCCHH
T ss_pred EEEEECcHHhcCCC---CCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchhhhhhhhhhccccchh
Confidence 99999999998877 7889999999999999999999999999999999999999986421
Q ss_pred -------------CCCCchhhHHHHHHHHhhhcccccccceeeeCCee
Q psy11190 212 -------------NAPLEVGAATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 212 -------------~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
....+|+|+++.+++++++.....+|+.+.+||..
T Consensus 266 ~~~~~~~~~~~~p~~~~~pedvA~av~fL~s~~a~~itG~~i~vdGG~ 313 (317)
T 3oec_A 266 DAAELFSQLTLLPIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGGQ 313 (317)
T ss_dssp HHHHHHTTTCSSSSSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred HHHHHHhhhccCCCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECcch
Confidence 11247999999999999998889999999999863
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-40 Score=281.47 Aligned_cols=222 Identities=18% Similarity=0.209 Sum_probs=198.9
Q ss_pred ceEEEecCCC--chhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCNR--GLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~--giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|++|||||+| |||+++|++|+++| ++|++++|+.+..+.+.++....+.+.++++|++|.++ ++++++++.+.
T Consensus 31 k~vlVTGasg~~GIG~~ia~~la~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~-v~~~~~~~~~~ 105 (296)
T 3k31_A 31 KKGVIIGVANDKSLAWGIAKAVCAQG----AEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAES-VDNMFKVLAEE 105 (296)
T ss_dssp CEEEEECCCSTTSHHHHHHHHHHHTT----CEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHH-HHHHHHHHHHH
T ss_pred CEEEEEeCCCCCCHHHHHHHHHHHCC----CEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHH-HHHHHHHHHHH
Confidence 7999999997 99999999999999 89999999987666666665555678899999999999 99999999999
Q ss_pred hcCCCccEEEeccccCCc---cccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecC
Q psy11190 80 VKDQGLNVLVNNAGIAAK---FTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSI 156 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~ 156 (248)
++ ++|+||||||+... ..++.+.+.++|++.+++|+.+++++++.++|.|.+ .|+||++||.
T Consensus 106 ~g--~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~-------------~g~IV~isS~ 170 (296)
T 3k31_A 106 WG--SLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTN-------------GGSILTLSYY 170 (296)
T ss_dssp HS--CCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT-------------CEEEEEEECG
T ss_pred cC--CCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc-------------CCEEEEEEeh
Confidence 98 59999999998753 156678899999999999999999999999999854 5899999999
Q ss_pred CCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC-----------------CCchhh
Q psy11190 157 MGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA-----------------PLEVGA 219 (248)
Q Consensus 157 ~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~-----------------~~~~~~ 219 (248)
.+..+. +++..|+++|+++++|+++|+.|++++||+||+|+||+++|++..... ..+|++
T Consensus 171 ~~~~~~---~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~ped 247 (296)
T 3k31_A 171 GAEKVV---PHYNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGISDFHYILTWNKYNSPLRRNTTLDD 247 (296)
T ss_dssp GGTSCC---TTTTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCHHHHHHHHHHHHHSTTSSCCCHHH
T ss_pred hhccCC---CCchhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcccchHHHHHHHHhcCCCCCCCCHHH
Confidence 998776 788999999999999999999999999999999999999999976431 358999
Q ss_pred HHHHHHHHhhhcccccccceeeeCCee
Q psy11190 220 ATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 220 ~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
+++.+++++++.....+|+.+.+||..
T Consensus 248 vA~~v~fL~s~~a~~itG~~i~vdGG~ 274 (296)
T 3k31_A 248 VGGAALYLLSDLGRGTTGETVHVDCGY 274 (296)
T ss_dssp HHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHHHHHcCCccCCccCCEEEECCCc
Confidence 999999999998899999999999863
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-41 Score=278.58 Aligned_cols=222 Identities=21% Similarity=0.253 Sum_probs=191.4
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEe-ecCchhHHHHHH-HHhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFAT-CRNKDKAVELLA-LAQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~-~r~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|++|||||++|||+++|++|+++| ++|+++ .++.+..++..+ +...+.++.++++|++|.++ ++++++++.+.
T Consensus 9 k~vlVTGas~GIG~aia~~la~~G----~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-v~~~~~~~~~~ 83 (259)
T 3edm_A 9 RTIVVAGAGRDIGRACAIRFAQEG----ANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAE-VEAAISAAADK 83 (259)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT----CEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHH-HHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCC----CEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHH-HHHHHHHHHHH
Confidence 799999999999999999999999 899988 666666666643 43345688999999999999 99999999999
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
++ ++|+||||||......++.+.+.++|++.+++|+.+++++++.++|.|.+ .|+||++||.++.
T Consensus 84 ~g--~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~-------------~g~iv~isS~~~~ 148 (259)
T 3edm_A 84 FG--EIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAK-------------GGAIVTFSSQAGR 148 (259)
T ss_dssp HC--SEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE-------------EEEEEEECCHHHH
T ss_pred hC--CCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc-------------CCEEEEEcCHHhc
Confidence 98 59999999998744478889999999999999999999999999999864 5789999999887
Q ss_pred -ccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC----------------CCchhhHHH
Q psy11190 160 -IEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA----------------PLEVGAATA 222 (248)
Q Consensus 160 -~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~----------------~~~~~~~~~ 222 (248)
.+. ++...|+++|+++++|+++++.|++++ |+||+|+||+++|+|..... ..+|+++++
T Consensus 149 ~~~~---~~~~~Y~asKaa~~~l~~~la~e~~~~-I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~ 224 (259)
T 3edm_A 149 DGGG---PGALAYATSKGAVMTFTRGLAKEVGPK-IRVNAVCPGMISTTFHDTFTKPEVRERVAGATSLKREGSSEDVAG 224 (259)
T ss_dssp HCCS---TTCHHHHHHHHHHHHHHHHHHHHHTTT-CEEEEEEECCBCC----------------------CCBCHHHHHH
T ss_pred cCCC---CCcHHHHHHHHHHHHHHHHHHHHHCCC-CEEEEEEECCCcCcccccccChHHHHHHHhcCCCCCCcCHHHHHH
Confidence 444 778899999999999999999999987 99999999999999875421 247999999
Q ss_pred HHHHHhhhcccccccceeeeCCeec
Q psy11190 223 GIIQFIQSLGEAHNGGFFEYTGKAI 247 (248)
Q Consensus 223 ~~~~~~~~~~~~~~g~~~~~~g~~~ 247 (248)
.+++++++.....+|+.+.+||...
T Consensus 225 ~v~~L~s~~~~~itG~~i~vdGg~~ 249 (259)
T 3edm_A 225 LVAFLASDDAAYVTGACYDINGGVL 249 (259)
T ss_dssp HHHHHHSGGGTTCCSCEEEESBCSS
T ss_pred HHHHHcCccccCccCCEEEECCCcC
Confidence 9999999988899999999999754
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-40 Score=275.42 Aligned_cols=226 Identities=23% Similarity=0.279 Sum_probs=193.2
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||++|||+++|++|+++| ++|++++|+.++++++.+.. ..++.++++|++|.++ ++++++++.+.++
T Consensus 10 k~vlITGas~gIG~~~a~~l~~~G----~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~-~~~~~~~~~~~~g 82 (261)
T 3n74_A 10 KVALITGAGSGFGEGMAKRFAKGG----AKVVIVDRDKAGAERVAGEI--GDAALAVAADISKEAD-VDAAVEAALSKFG 82 (261)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHH--CTTEEEEECCTTSHHH-HHHHHHHHHHHHS
T ss_pred CEEEEECCCchHHHHHHHHHHHCC----CEEEEEcCCHHHHHHHHHHh--CCceEEEEecCCCHHH-HHHHHHHHHHhcC
Confidence 799999999999999999999999 89999999998887775443 4578999999999999 9999999999988
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+||||||.......+.+.+.++|++.+++|+.+++++++.++|.|.+++..+ ..++||++||..+..+
T Consensus 83 --~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~-------~~~~iv~isS~~~~~~ 153 (261)
T 3n74_A 83 --KVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKG-------QECVILNVASTGAGRP 153 (261)
T ss_dssp --CCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTT-------CCEEEEEECCTTTTSC
T ss_pred --CCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCC-------CCeEEEEeCchhhcCC
Confidence 5999999999876446777789999999999999999999999999998863211 3678999999999877
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC-------------------CCchhhHHH
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA-------------------PLEVGAATA 222 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~-------------------~~~~~~~~~ 222 (248)
. +++..|+++|+++++|+++|+.|++++||+||+|+||+++|++.+... ..+|+++++
T Consensus 154 ~---~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~ 230 (261)
T 3n74_A 154 R---PNLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPMGRLLKPDDLAE 230 (261)
T ss_dssp C---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------------------------CTTSSCCCHHHHHH
T ss_pred C---CCccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccCcHHHHHHHhhcCCcCCCcCHHHHHH
Confidence 6 788899999999999999999999999999999999999999865321 357999999
Q ss_pred HHHHHhhhcccccccceeeeCCee
Q psy11190 223 GIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 223 ~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
.+++++++.....+|+.+.+||..
T Consensus 231 ~~~~l~s~~~~~itG~~i~vdgG~ 254 (261)
T 3n74_A 231 AAAFLCSPQASMITGVALDVDGGR 254 (261)
T ss_dssp HHHHHTSGGGTTCCSCEEEESTTT
T ss_pred HHHHHcCCcccCcCCcEEEecCCc
Confidence 999999988889999999999863
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-41 Score=281.77 Aligned_cols=220 Identities=17% Similarity=0.178 Sum_probs=190.6
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchh-------HHHH-HHHHhhcCCceeEEeeccCCchhhhhHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDK-------AVEL-LALAQQHSNLHVIELDVTDFSKQQDVLF 73 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~-------~~~~-~~~~~~~~~~~~~~~D~~~~~~~v~~~~ 73 (248)
|++|||||++|||+++|++|+++| ++|++++|+.++ ++++ .++...+.++.++++|++|.++ +++++
T Consensus 7 k~~lVTGas~GIG~aia~~la~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-v~~~~ 81 (274)
T 3e03_A 7 KTLFITGASRGIGLAIALRAARDG----ANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQ-VRAAV 81 (274)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT----CEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHH-HHHHH
T ss_pred cEEEEECCCChHHHHHHHHHHHCC----CEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHH-HHHHH
Confidence 799999999999999999999999 899999999764 4444 3333446688999999999999 99999
Q ss_pred HHhhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEe
Q psy11190 74 KDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNV 153 (248)
Q Consensus 74 ~~i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~v 153 (248)
+++.+.++ ++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|+++ +.|+||++
T Consensus 82 ~~~~~~~g--~iD~lvnnAG~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-----------~~g~iv~i 147 (274)
T 3e03_A 82 AATVDTFG--GIDILVNNASAIWL-RGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQA-----------PNPHILTL 147 (274)
T ss_dssp HHHHHHHS--CCCEEEECCCCCCC-CCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTS-----------SSCEEEEC
T ss_pred HHHHHHcC--CCCEEEECCCcccC-CCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhc-----------CCceEEEE
Confidence 99999988 59999999998765 677788999999999999999999999999999875 57999999
Q ss_pred ecCCCccc--ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCc-ceecCCCCCCC------CCchhhHHHHH
Q psy11190 154 SSIMGSIE--DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPG-WVKTDMGGSNA------PLEVGAATAGI 224 (248)
Q Consensus 154 ss~~~~~~--~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG-~v~t~~~~~~~------~~~~~~~~~~~ 224 (248)
||..+..+ . ++...|++||+++.+|+++++.|++++||+||+|+|| +++|+|.+... ..+|+++++.+
T Consensus 148 sS~~~~~~~~~---~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~~~~~~~~~~~~~~pedvA~~v 224 (274)
T 3e03_A 148 APPPSLNPAWW---GAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAINMLPGVDAAACRRPEIMADAA 224 (274)
T ss_dssp CCCCCCCHHHH---HHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC-------CCCGGGSBCTHHHHHHH
T ss_pred CChHhcCCCCC---CCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchhhhcccccccccCCHHHHHHHH
Confidence 99998876 4 5678899999999999999999999999999999999 68999874432 35899999999
Q ss_pred HHHhhhcccccccceeeeC
Q psy11190 225 IQFIQSLGEAHNGGFFEYT 243 (248)
Q Consensus 225 ~~~~~~~~~~~~g~~~~~~ 243 (248)
++++++.....+|+++..+
T Consensus 225 ~~l~s~~~~~itG~~i~~~ 243 (274)
T 3e03_A 225 HAVLTREAAGFHGQFLIDD 243 (274)
T ss_dssp HHHHTSCCTTCCSCEEEHH
T ss_pred HHHhCccccccCCeEEEcC
Confidence 9999998899999999433
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-40 Score=276.17 Aligned_cols=224 Identities=21% Similarity=0.270 Sum_probs=200.1
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEee-cCchhHHHH-HHHHhhcCCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATC-RNKDKAVEL-LALAQQHSNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~-r~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
.|++|||||++|||+++|++|+++| ++|++.+ |+.++.++. .++.....++.++++|++|.++ ++.+++++.+
T Consensus 13 ~k~vlITGas~giG~~ia~~l~~~G----~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-v~~~~~~~~~ 87 (256)
T 3ezl_A 13 QRIAYVTGGMGGIGTSICQRLHKDG----FRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDS-TKQAFDKVKA 87 (256)
T ss_dssp CEEEEETTTTSHHHHHHHHHHHHTT----EEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHH-HHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC----CEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHH-HHHHHHHHHH
Confidence 3789999999999999999999999 8999987 666666665 3444445689999999999999 9999999999
Q ss_pred hhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 79 VVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
.++ ++|+||||||.... ..+.+.+.++|++.+++|+.+++++++.++|.|.++ +.++||++||..+
T Consensus 88 ~~g--~id~lv~~Ag~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-----------~~g~iv~isS~~~ 153 (256)
T 3ezl_A 88 EVG--EIDVLVNNAGITRD-VVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVER-----------GWGRIINISSVNG 153 (256)
T ss_dssp HTC--CEEEEEECCCCCCC-CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----------TCEEEEEECCCCG
T ss_pred hcC--CCCEEEECCCCCCC-CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----------CCCEEEEEcchhh
Confidence 987 59999999998865 778889999999999999999999999999999886 5799999999999
Q ss_pred cccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC---------------CCchhhHHHH
Q psy11190 159 SIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA---------------PLEVGAATAG 223 (248)
Q Consensus 159 ~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~---------------~~~~~~~~~~ 223 (248)
..+. ++...|+++|+++++|+++++.|++++||+|++|+||+++|++.+... ..+|+++++.
T Consensus 154 ~~~~---~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~ 230 (256)
T 3ezl_A 154 QKGQ---FGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLEKIVATIPVRRLGSPDEIGSI 230 (256)
T ss_dssp GGSC---SCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHHHSTTSSCBCHHHHHHH
T ss_pred ccCC---CCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCccccccCHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence 8877 788999999999999999999999999999999999999999865432 3589999999
Q ss_pred HHHHhhhcccccccceeeeCCee
Q psy11190 224 IIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 224 ~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
++.++++.....+|+.+.++|..
T Consensus 231 ~~~l~s~~~~~~tG~~i~vdgG~ 253 (256)
T 3ezl_A 231 VAWLASEESGFSTGADFSLNGGL 253 (256)
T ss_dssp HHHHHSGGGTTCCSCEEEESTTS
T ss_pred HHHHhCCcccCCcCcEEEECCCE
Confidence 99999988889999999999864
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-41 Score=280.31 Aligned_cols=221 Identities=20% Similarity=0.286 Sum_probs=194.1
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH-HHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL-LALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|++|||||++|||+++|++|+++| ++|++++|+. .+++. .++...+.++.++++|++|.++ ++.+.+.+.+ +
T Consensus 32 k~~lVTGas~GIG~aia~~la~~G----~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~Dv~d~~~-v~~~~~~~~~-~ 104 (273)
T 3uf0_A 32 RTAVVTGAGSGIGRAIAHGYARAG----AHVLAWGRTD-GVKEVADEIADGGGSAEAVVADLADLEG-AANVAEELAA-T 104 (273)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT----CEEEEEESST-HHHHHHHHHHTTTCEEEEEECCTTCHHH-HHHHHHHHHH-H
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC----CEEEEEcCHH-HHHHHHHHHHhcCCcEEEEEecCCCHHH-HHHHHHHHHh-c
Confidence 789999999999999999999999 8999999764 44444 4444445678999999999999 8888555544 4
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+ ++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|.++ +.|+||++||..+..
T Consensus 105 g--~iD~lv~nAg~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-----------~~g~IV~isS~~~~~ 170 (273)
T 3uf0_A 105 R--RVDVLVNNAGIIAR-APAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAH-----------GSGRIVTIASMLSFQ 170 (273)
T ss_dssp S--CCCEEEECCCCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----------TCEEEEEECCGGGTS
T ss_pred C--CCcEEEECCCCCCC-CCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----------CCCEEEEEcchHhcC
Confidence 5 59999999998865 778888999999999999999999999999999886 579999999999988
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC-----------------CCCchhhHHHH
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN-----------------APLEVGAATAG 223 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~-----------------~~~~~~~~~~~ 223 (248)
+. ++...|+++|+++++|+++++.|++++||+||+|+||+++|++.... ...+|+++++.
T Consensus 171 ~~---~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~ 247 (273)
T 3uf0_A 171 GG---RNVAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRADDERAAEITARIPAGRWATPEDMVGP 247 (273)
T ss_dssp CC---SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHHHSTTSSCBCGGGGHHH
T ss_pred CC---CCChhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccCHHHHHHHHhcCCCCCCCCHHHHHHH
Confidence 77 78899999999999999999999999999999999999999985421 24689999999
Q ss_pred HHHHhhhcccccccceeeeCCee
Q psy11190 224 IIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 224 ~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
+++++++.....+|+.+.+||..
T Consensus 248 v~~L~s~~a~~itG~~i~vdGG~ 270 (273)
T 3uf0_A 248 AVFLASDAASYVHGQVLAVDGGW 270 (273)
T ss_dssp HHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHhCchhcCCcCCEEEECcCc
Confidence 99999998889999999999863
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-40 Score=277.86 Aligned_cols=222 Identities=25% Similarity=0.335 Sum_probs=195.0
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCc-hhHHHHHH-HHhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNK-DKAVELLA-LAQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~-~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|++|||||++|||+++|++|+++| ++|++++++. +.++++.+ +...+.++.++++|++|.++ ++++++++.+.
T Consensus 32 k~~lVTGas~GIG~aia~~la~~G----~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~-v~~~~~~~~~~ 106 (271)
T 3v2g_A 32 KTAFVTGGSRGIGAAIAKRLALEG----AAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEA-IEQAIRETVEA 106 (271)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT----CEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH-HHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC----CEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHH-HHHHHHHHHHH
Confidence 789999999999999999999999 8999986654 55565543 33445688999999999999 99999999999
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
++ ++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|.+ .|+||++||..+.
T Consensus 107 ~g--~iD~lvnnAg~~~~-~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~-------------~g~iv~isS~~~~ 170 (271)
T 3v2g_A 107 LG--GLDILVNSAGIWHS-APLEETTVADFDEVMAVNFRAPFVAIRSASRHLGD-------------GGRIITIGSNLAE 170 (271)
T ss_dssp HS--CCCEEEECCCCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT-------------TCEEEEECCGGGT
T ss_pred cC--CCcEEEECCCCCCC-CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc-------------CCEEEEEeChhhc
Confidence 98 59999999998765 77888999999999999999999999999999853 6899999998776
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC--------------CCchhhHHHHHH
Q psy11190 160 IEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA--------------PLEVGAATAGII 225 (248)
Q Consensus 160 ~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~--------------~~~~~~~~~~~~ 225 (248)
... .++...|+++|+++++|+++|+.|++++||+||+|+||+++|++..... ..+|+++++.++
T Consensus 171 ~~~--~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~ 248 (271)
T 3v2g_A 171 LVP--WPGISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADGDHAEAQRERIATGSYGEPQDIAGLVA 248 (271)
T ss_dssp CCC--STTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSCSSHHHHHHTCTTSSCBCHHHHHHHHH
T ss_pred cCC--CCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccchhHHHHHhcCCCCCCCCHHHHHHHHH
Confidence 542 2678899999999999999999999999999999999999999975432 357999999999
Q ss_pred HHhhhcccccccceeeeCCee
Q psy11190 226 QFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 226 ~~~~~~~~~~~g~~~~~~g~~ 246 (248)
+++++.....+|+.+.+||..
T Consensus 249 fL~s~~~~~itG~~i~vdGG~ 269 (271)
T 3v2g_A 249 WLAGPQGKFVTGASLTIDGGA 269 (271)
T ss_dssp HHHSGGGTTCCSCEEEESTTT
T ss_pred HHhCcccCCccCCEEEeCcCc
Confidence 999998899999999999963
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-41 Score=282.67 Aligned_cols=221 Identities=18% Similarity=0.184 Sum_probs=189.7
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCc---hhHHHHHH-HHhhcCCceeEEeeccCCchhhhhHHHHhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNK---DKAVELLA-LAQQHSNLHVIELDVTDFSKQQDVLFKDIS 77 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~---~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~ 77 (248)
|++|||||++|||+++|++|+++| ++|++++|.. +.++++.+ +...+.++.++++|++|.++ ++++++++.
T Consensus 12 k~vlVTGas~GIG~aia~~la~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~-v~~~~~~~~ 86 (262)
T 3ksu_A 12 KVIVIAGGIKNLGALTAKTFALES----VNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEE-VAKLFDFAE 86 (262)
T ss_dssp CEEEEETCSSHHHHHHHHHHTTSS----CEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHH-HHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCC----CEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHH-HHHHHHHHH
Confidence 789999999999999999999999 8999987754 34555533 33335578999999999999 999999999
Q ss_pred hhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCC
Q psy11190 78 DVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIM 157 (248)
Q Consensus 78 ~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~ 157 (248)
+.++ ++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|. +.|+||++||..
T Consensus 87 ~~~g--~iD~lvnnAg~~~~-~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~-------------~~g~iv~isS~~ 150 (262)
T 3ksu_A 87 KEFG--KVDIAINTVGKVLK-KPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMN-------------PNGHIITIATSL 150 (262)
T ss_dssp HHHC--SEEEEEECCCCCCS-SCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEE-------------EEEEEEEECCCH
T ss_pred HHcC--CCCEEEECCCCCCC-CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhc-------------CCCEEEEEechh
Confidence 9988 59999999998875 7788889999999999999999999999999993 368999999999
Q ss_pred CcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC----------------CCCchhhHH
Q psy11190 158 GSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN----------------APLEVGAAT 221 (248)
Q Consensus 158 ~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~----------------~~~~~~~~~ 221 (248)
+..+. ++...|+++|+++.+|+++|+.|++++||+||+|+||+++|++.... ...+|++++
T Consensus 151 ~~~~~---~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA 227 (262)
T 3ksu_A 151 LAAYT---GFYSTYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQETKESTAFHKSQAMGNQLTKIEDIA 227 (262)
T ss_dssp HHHHH---CCCCC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC------------CCCCSCCGGGTH
T ss_pred hccCC---CCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCchHHHHHHHhcCcccCCCCHHHHH
Confidence 88877 77889999999999999999999999999999999999999875321 135899999
Q ss_pred HHHHHHhhhcccccccceeeeCCeec
Q psy11190 222 AGIIQFIQSLGEAHNGGFFEYTGKAI 247 (248)
Q Consensus 222 ~~~~~~~~~~~~~~~g~~~~~~g~~~ 247 (248)
+.+++++++ ....+|+.+.+||...
T Consensus 228 ~~v~~L~s~-~~~itG~~i~vdGg~~ 252 (262)
T 3ksu_A 228 PIIKFLTTD-GWWINGQTIFANGGYT 252 (262)
T ss_dssp HHHHHHHTT-TTTCCSCEEEESTTCC
T ss_pred HHHHHHcCC-CCCccCCEEEECCCcc
Confidence 999999988 8889999999999764
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-40 Score=273.62 Aligned_cols=221 Identities=24% Similarity=0.257 Sum_probs=190.1
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCc-hhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNK-DKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|++|||||++|||++++++|+++| ++|++++|+. +++++ ++...+.++.++++|++|.++ ++++++++.+.+
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G----~~V~~~~r~~~~~~~~--~~~~~~~~~~~~~~Dv~~~~~-v~~~~~~~~~~~ 80 (249)
T 2ew8_A 8 KLAVITGGANGIGRAIAERFAVEG----ADIAIADLVPAPEAEA--AIRNLGRRVLTVKCDVSQPGD-VEAFGKQVISTF 80 (249)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT----CEEEEEESSCCHHHHH--HHHHTTCCEEEEECCTTCHHH-HHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC----CEEEEEcCCchhHHHH--HHHhcCCcEEEEEeecCCHHH-HHHHHHHHHHHc
Confidence 689999999999999999999999 8999999998 65554 222234578899999999999 999999999988
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+ ++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|+++ +.++||++||..+..
T Consensus 81 g--~id~lv~nAg~~~~-~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----------~~g~iv~isS~~~~~ 146 (249)
T 2ew8_A 81 G--RCDILVNNAGIYPL-IPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRN-----------GWGRIINLTSTTYWL 146 (249)
T ss_dssp S--CCCEEEECCCCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----------TCEEEEEECCGGGGS
T ss_pred C--CCCEEEECCCCCCC-CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----------CCeEEEEEcchhhcc
Confidence 7 59999999998764 677788999999999999999999999999999876 578999999999887
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCC-CC-------------C---CCchhhHHHH
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGG-SN-------------A---PLEVGAATAG 223 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~-~~-------------~---~~~~~~~~~~ 223 (248)
+. ++...|+++|++++.|+++++.|++++||+||+|+||+++|++.. .. + ..+|+++++.
T Consensus 147 ~~---~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~ 223 (249)
T 2ew8_A 147 KI---EAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGA 223 (249)
T ss_dssp CC---SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC------------------CTTSSSCSCCCTHHHHHH
T ss_pred CC---CCchhHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhccccchhhHHHHhhCccCCCCCHHHHHHH
Confidence 76 778899999999999999999999999999999999999999865 21 0 2479999999
Q ss_pred HHHHhhhcccccccceeeeCCee
Q psy11190 224 IIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 224 ~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
+++++++.....+|+.+.++|..
T Consensus 224 ~~~l~s~~~~~~tG~~~~vdGG~ 246 (249)
T 2ew8_A 224 AAFLASDDASFITGQTLAVDGGM 246 (249)
T ss_dssp HHHHTSGGGTTCCSCEEEESSSC
T ss_pred HHHHcCcccCCCCCcEEEECCCc
Confidence 99999887788999999999864
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-40 Score=277.28 Aligned_cols=224 Identities=20% Similarity=0.252 Sum_probs=197.7
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEee-cCchhHHHHH-HHHhhcCCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATC-RNKDKAVELL-ALAQQHSNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~-r~~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
+|++|||||++|||+++|++|+++| ++|++.+ ++.+..++.. ++...+.++.++++|++|.++ ++.+++++.+
T Consensus 25 ~k~vlITGas~gIG~~~a~~l~~~G----~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-v~~~~~~~~~ 99 (269)
T 3gk3_A 25 KRVAFVTGGMGGLGAAISRRLHDAG----MAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFES-CERCAEKVLA 99 (269)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTTT----CEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHH-HHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC----CEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHH-HHHHHHHHHH
Confidence 3789999999999999999999999 8999998 5555555543 333345689999999999999 9999999999
Q ss_pred hhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 79 VVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
.++ ++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|.++ +.++||++||.++
T Consensus 100 ~~g--~id~li~nAg~~~~-~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-----------~~g~iv~isS~~~ 165 (269)
T 3gk3_A 100 DFG--KVDVLINNAGITRD-ATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVER-----------RFGRIVNIGSVNG 165 (269)
T ss_dssp HHS--CCSEEEECCCCCCC-BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----------TCEEEEEECCHHH
T ss_pred HcC--CCCEEEECCCcCCC-cchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----------CCCEEEEeCChhh
Confidence 988 59999999998865 778888999999999999999999999999999886 5799999999998
Q ss_pred cccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC----------------CCchhhHHH
Q psy11190 159 SIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA----------------PLEVGAATA 222 (248)
Q Consensus 159 ~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~----------------~~~~~~~~~ 222 (248)
..+. +++..|+++|+++++|+++|+.|++++||+||+|+||+++|++.+... ..+|+++++
T Consensus 166 ~~~~---~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~ 242 (269)
T 3gk3_A 166 SRGA---FGQANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQDVLEAKILPQIPVGRLGRPDEVAA 242 (269)
T ss_dssp HHCC---TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC-------CCSGGGCTTSSCBCHHHHHH
T ss_pred ccCC---CCcchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhchhHHHHHhhhcCCcCCccCHHHHHH
Confidence 8776 788999999999999999999999999999999999999999875421 237999999
Q ss_pred HHHHHhhhcccccccceeeeCCee
Q psy11190 223 GIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 223 ~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
.++.++++.....+|+.+.+||..
T Consensus 243 ~v~~L~s~~~~~itG~~i~vdgG~ 266 (269)
T 3gk3_A 243 LIAFLCSDDAGFVTGADLAINGGM 266 (269)
T ss_dssp HHHHHTSTTCTTCCSCEEEESTTS
T ss_pred HHHHHhCCCcCCeeCcEEEECCCE
Confidence 999999988888999999999863
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-41 Score=278.05 Aligned_cols=222 Identities=24% Similarity=0.271 Sum_probs=188.9
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhh---c-CCceeEEeeccCCchhhhhHHHHhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQ---H-SNLHVIELDVTDFSKQQDVLFKDIS 77 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~---~-~~~~~~~~D~~~~~~~v~~~~~~i~ 77 (248)
|++|||||++|||+++|++|+++| ++|++++|+.++++++.+.... . .++.++++|++|.++ ++++++++.
T Consensus 8 k~~lVTGas~GIG~aia~~l~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-v~~~~~~~~ 82 (250)
T 3nyw_A 8 GLAIITGASQGIGAVIAAGLATDG----YRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTK-ADTEIKDIH 82 (250)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHT----CEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHH-HHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHH-HHHHHHHHH
Confidence 789999999999999999999999 8999999999888877443322 2 578899999999999 999999999
Q ss_pred hhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCC
Q psy11190 78 DVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIM 157 (248)
Q Consensus 78 ~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~ 157 (248)
+.++ ++|+||||||.... .++ +.+.++|++.+++|+.+++++++.++|.|+++ +.|+||++||.+
T Consensus 83 ~~~g--~iD~lvnnAg~~~~-~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-----------~~g~iv~isS~~ 147 (250)
T 3nyw_A 83 QKYG--AVDILVNAAAMFMD-GSL-SEPVDNFRKIMEINVIAQYGILKTVTEIMKVQ-----------KNGYIFNVASRA 147 (250)
T ss_dssp HHHC--CEEEEEECCCCCCC-CCC-SCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----------TCEEEEEECC--
T ss_pred HhcC--CCCEEEECCCcCCC-CCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----------CCeEEEEEccHH
Confidence 9988 69999999998765 555 67889999999999999999999999999886 579999999999
Q ss_pred CcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC-------CCCchhhHHHHHHHHhhh
Q psy11190 158 GSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN-------APLEVGAATAGIIQFIQS 230 (248)
Q Consensus 158 ~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~-------~~~~~~~~~~~~~~~~~~ 230 (248)
+..+. ++...|+++|+++.+|+++|+.|++++||+||+|+||+++|+|.+.. ...+|+++++.+++++++
T Consensus 148 ~~~~~---~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~p~dva~~v~~l~s~ 224 (250)
T 3nyw_A 148 AKYGF---ADGGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMAKKAGTPFKDEEMIQPDDLLNTIRCLLNL 224 (250)
T ss_dssp --------CCTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHTTCCSCGGGSBCHHHHHHHHHHHHTS
T ss_pred hcCCC---CCCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchhhhcCCCcccccCCCHHHHHHHHHHHHcC
Confidence 98866 55889999999999999999999999999999999999999985432 146899999999999987
Q ss_pred ccc-ccccceeeeCCee
Q psy11190 231 LGE-AHNGGFFEYTGKA 246 (248)
Q Consensus 231 ~~~-~~~g~~~~~~g~~ 246 (248)
... ..++..+.+||..
T Consensus 225 ~~~~~~~~~~i~vd~~~ 241 (250)
T 3nyw_A 225 SENVCIKDIVFEMKKSI 241 (250)
T ss_dssp CTTEECCEEEEEEHHHH
T ss_pred CCceEeeEEEEEeeccc
Confidence 554 5777777877753
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-40 Score=276.24 Aligned_cols=223 Identities=25% Similarity=0.331 Sum_probs=194.1
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHH-HHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|++|||||++|||++++++|+++| ++|++++|+.++++++.+ +...+.++.++++|++|.++ ++.+++++.+.+
T Consensus 22 k~vlVTGas~gIG~aia~~l~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~~ 96 (273)
T 1ae1_A 22 TTALVTGGSKGIGYAIVEELAGLG----ARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTE-RDKLMQTVAHVF 96 (273)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH-HHHHHHHHHHHT
T ss_pred CEEEEECCcchHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHH-HHHHHHHHHHHc
Confidence 789999999999999999999999 899999999888777643 33335578899999999999 999999999988
Q ss_pred -cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 81 -KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 81 -~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
+ ++|+||||||.... .++.+.+.++|++.+++|+.++++++++++|.|+++ +.++||++||..+.
T Consensus 97 ~g--~id~lv~nAg~~~~-~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-----------~~g~iv~isS~~~~ 162 (273)
T 1ae1_A 97 DG--KLNILVNNAGVVIH-KEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKAS-----------QNGNVIFLSSIAGF 162 (273)
T ss_dssp TS--CCCEEEECCCCCCC-CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----------TSEEEEEECCGGGT
T ss_pred CC--CCcEEEECCCCCCC-CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----------CCcEEEEEcCHhhc
Confidence 6 59999999998754 677888999999999999999999999999999875 57899999999998
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC---------------------CCCchh
Q psy11190 160 IEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN---------------------APLEVG 218 (248)
Q Consensus 160 ~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~---------------------~~~~~~ 218 (248)
.+. ++...|+++|++++.|+++++.|++++||+||+|+||+++|++.... ...+|+
T Consensus 163 ~~~---~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~ 239 (273)
T 1ae1_A 163 SAL---PSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQ 239 (273)
T ss_dssp SCC---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTTCSCBCHH
T ss_pred CCC---CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhcCCCCCCcCHH
Confidence 776 77889999999999999999999999999999999999999985431 134799
Q ss_pred hHHHHHHHHhhhcccccccceeeeCCee
Q psy11190 219 AATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
++++.++.++++.....+|+.+.++|..
T Consensus 240 dvA~~v~~l~s~~~~~~tG~~i~vdGG~ 267 (273)
T 1ae1_A 240 EVSALIAFLCFPAASYITGQIIWADGGF 267 (273)
T ss_dssp HHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHHHHHHhCccccCcCCCEEEECCCc
Confidence 9999999999887788999999999863
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-40 Score=274.10 Aligned_cols=223 Identities=21% Similarity=0.278 Sum_probs=194.2
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchh-HHHHHHHHhh--cCCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDK-AVELLALAQQ--HSNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~-~~~~~~~~~~--~~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
|++|||||++|||++++++|+++| ++|++++|+.++ ++++.+.... +.++.++++|++|.++ ++++++++.+
T Consensus 5 k~vlVTGas~gIG~~ia~~l~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-v~~~~~~~~~ 79 (260)
T 1x1t_A 5 KVAVVTGSTSGIGLGIATALAAQG----ADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEA-VRGLVDNAVR 79 (260)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTT----CEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHH-HHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHcC----CEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHH-HHHHHHHHHH
Confidence 799999999999999999999999 899999999877 7766443322 4578899999999999 9999999999
Q ss_pred hhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 79 VVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
.++ ++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|.++ +.++||++||..+
T Consensus 80 ~~g--~iD~lv~~Ag~~~~-~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----------~~g~iv~isS~~~ 145 (260)
T 1x1t_A 80 QMG--RIDILVNNAGIQHT-ALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQ-----------GFGRIINIASAHG 145 (260)
T ss_dssp HHS--CCSEEEECCCCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----------TCEEEEEECCGGG
T ss_pred hcC--CCCEEEECCCCCCC-CChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----------CCCEEEEECcHHh
Confidence 887 59999999998754 667788999999999999999999999999999875 5789999999998
Q ss_pred cccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC--------------------------
Q psy11190 159 SIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN-------------------------- 212 (248)
Q Consensus 159 ~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~-------------------------- 212 (248)
..+. ++...|+++|++++.|+++++.|++++||+||+|+||+++|++....
T Consensus 146 ~~~~---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 222 (260)
T 1x1t_A 146 LVAS---ANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPS 222 (260)
T ss_dssp TSCC---TTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTT
T ss_pred CcCC---CCCchHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhccccCCchHHHHHHHhhccCCC
Confidence 8776 77889999999999999999999999999999999999999985421
Q ss_pred -CCCchhhHHHHHHHHhhhcccccccceeeeCCee
Q psy11190 213 -APLEVGAATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 213 -~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
...+|+++++.+++++++.....+|+.+.++|..
T Consensus 223 ~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdgG~ 257 (260)
T 1x1t_A 223 LQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGGW 257 (260)
T ss_dssp CCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred CCCcCHHHHHHHHHHHhChhhcCCCCCEEEECCCc
Confidence 0247999999999999887788999999999863
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-40 Score=279.45 Aligned_cols=221 Identities=20% Similarity=0.241 Sum_probs=193.3
Q ss_pred ceEEEecCC--CchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCN--RGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas--~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|++|||||+ +|||+++|++|+++| ++|++++|+.+..+.+.++....+++.++++|++|.++ ++++++++.+.
T Consensus 32 k~~lVTGasg~~GIG~aia~~la~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~-v~~~~~~~~~~ 106 (293)
T 3grk_A 32 KRGLILGVANNRSIAWGIAKAAREAG----AELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAAS-IDAVFETLEKK 106 (293)
T ss_dssp CEEEEECCCSSSSHHHHHHHHHHHTT----CEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHH-HHHHHHHHHHH
T ss_pred CEEEEEcCCCCCcHHHHHHHHHHHCC----CEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHH-HHHHHHHHHHh
Confidence 799999999 559999999999999 89999999965555555555555678999999999999 99999999999
Q ss_pred hcCCCccEEEeccccCCc---cccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecC
Q psy11190 80 VKDQGLNVLVNNAGIAAK---FTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSI 156 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~ 156 (248)
++ ++|+||||||+..+ ..++.+.+.++|++.+++|+.+++++++.++|.|.+ .|+||++||.
T Consensus 107 ~g--~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~-------------~g~Iv~isS~ 171 (293)
T 3grk_A 107 WG--KLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMAD-------------GGSILTLTYY 171 (293)
T ss_dssp TS--CCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTT-------------CEEEEEEECG
T ss_pred cC--CCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccC-------------CCEEEEEeeh
Confidence 88 59999999998752 256778899999999999999999999999999864 6899999999
Q ss_pred CCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC-----------------CCchhh
Q psy11190 157 MGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA-----------------PLEVGA 219 (248)
Q Consensus 157 ~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~-----------------~~~~~~ 219 (248)
.+..+. +++..|+++|+++++|+++|+.|++++||+||+|+||+++|++.+... ..+|++
T Consensus 172 ~~~~~~---~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~ped 248 (293)
T 3grk_A 172 GAEKVM---PNYNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIDE 248 (293)
T ss_dssp GGTSBC---TTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CCHHHHHHHHHHHSTTSSCCCHHH
T ss_pred hhccCC---CchHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccchHHHHHHHHhcCCCCCCCCHHH
Confidence 998876 788999999999999999999999999999999999999999875432 358999
Q ss_pred HHHHHHHHhhhcccccccceeeeCCe
Q psy11190 220 ATAGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 220 ~~~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
+++.+++++++.....+|+.+.+||.
T Consensus 249 vA~~v~~L~s~~~~~itG~~i~vdGG 274 (293)
T 3grk_A 249 VGDVGLYFLSDLSRSVTGEVHHADSG 274 (293)
T ss_dssp HHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHHHHHcCccccCCcceEEEECCC
Confidence 99999999999888999999999985
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-40 Score=277.54 Aligned_cols=227 Identities=21% Similarity=0.206 Sum_probs=195.8
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEee-cCchhHHHHHHHH--hhcCCceeEEeeccCCc------------
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATC-RNKDKAVELLALA--QQHSNLHVIELDVTDFS------------ 66 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~-r~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~------------ 66 (248)
|++|||||++|||++++++|+++| ++|++++ |+.++++++.+.+ ..+.++.++++|+++.+
T Consensus 10 k~~lVTGas~GIG~aia~~la~~G----~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 85 (291)
T 1e7w_A 10 PVALVTGAAKRLGRSIAEGLHAEG----YAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAP 85 (291)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTT----CEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCC
T ss_pred CEEEEECCCchHHHHHHHHHHHCC----CeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCcccccccccccccc
Confidence 789999999999999999999999 8999999 9988877774433 23457899999999999
Q ss_pred -----hhhhhHHHHhhhhhcCCCccEEEeccccCCccccCCCCC--------------hhhhhheeeecchhhHHHHHHH
Q psy11190 67 -----KQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLK--------------PEQMTDHFLVNVTAPLMLTKTM 127 (248)
Q Consensus 67 -----~~v~~~~~~i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~--------------~~~~~~~~~~n~~~~~~l~~~~ 127 (248)
+ ++++++++.+.++ ++|+||||||.... .++.+.+ .++|++.+++|+.+++++++.+
T Consensus 86 ~~~~~~-v~~~~~~~~~~~g--~iD~lvnnAg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~ 161 (291)
T 1e7w_A 86 VTLFTR-CAELVAACYTHWG--RCDVLVNNASSFYP-TPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAF 161 (291)
T ss_dssp BCHHHH-HHHHHHHHHHHHS--CCCEEEECCCCCCC-CCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred cchHHH-HHHHHHHHHHhcC--CCCEEEECCCCCCC-CChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHH
Confidence 8 9999999999887 59999999998765 6777778 8999999999999999999999
Q ss_pred hHHHHhhhhcccCCCCCCCCceEEEeecCCCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecC
Q psy11190 128 LPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTD 207 (248)
Q Consensus 128 ~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~ 207 (248)
+|.|.+++.... ...++||++||..+..+. ++...|+++|+++.+|+++|+.|++++||+||+|+||+++|+
T Consensus 162 ~~~m~~~~~~~~-----~~~g~Iv~isS~~~~~~~---~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~ 233 (291)
T 1e7w_A 162 AHRVAGTPAKHR-----GTNYSIINMVDAMTNQPL---LGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLV 233 (291)
T ss_dssp HHHHHTSCGGGS-----CSCEEEEEECCTTTTSCC---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCG
T ss_pred HHHHHhcCCCCC-----CCCcEEEEEechhhcCCC---CCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCC
Confidence 999987521000 015899999999998776 788999999999999999999999999999999999999999
Q ss_pred CCC-------------CC--CCCchhhHHHHHHHHhhhcccccccceeeeCCe
Q psy11190 208 MGG-------------SN--APLEVGAATAGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 208 ~~~-------------~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
| + +. ...+|+++++.+++++++.....+|+++.+||.
T Consensus 234 ~-~~~~~~~~~~~~~~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG 285 (291)
T 1e7w_A 234 D-DMPPAVWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGG 285 (291)
T ss_dssp G-GSCHHHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred c-cCCHHHHHHHHhhCCCCCCCCCHHHHHHHHHHHhCCcccCccCcEEEECCC
Confidence 8 3 11 235799999999999998888899999999986
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-40 Score=274.81 Aligned_cols=224 Identities=19% Similarity=0.309 Sum_probs=197.8
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHH--hhcCCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALA--QQHSNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
.|++|||||++|||++++++|+++| ++|++++|+.++++++.+.+ ..+.++.++++|++|.++ ++.+++++.+
T Consensus 21 ~k~~lVTGas~gIG~~ia~~l~~~G----~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~-v~~~~~~~~~ 95 (267)
T 1vl8_A 21 GRVALVTGGSRGLGFGIAQGLAEAG----CSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEE-VKKLLEAVKE 95 (267)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHH-HHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH-HHHHHHHHHH
Confidence 3799999999999999999999999 89999999988877764332 234578889999999999 9999999999
Q ss_pred hhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCC-
Q psy11190 79 VVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIM- 157 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~- 157 (248)
.++ ++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|+++ +.++||++||..
T Consensus 96 ~~g--~iD~lvnnAg~~~~-~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-----------~~g~iv~isS~~~ 161 (267)
T 1vl8_A 96 KFG--KLDTVVNAAGINRR-HPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRES-----------DNPSIINIGSLTV 161 (267)
T ss_dssp HHS--CCCEEEECCCCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTC-----------SSCEEEEECCGGG
T ss_pred HcC--CCCEEEECCCcCCC-CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----------CCcEEEEECCcch
Confidence 887 59999999998764 677788999999999999999999999999999875 578999999998
Q ss_pred CcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC-----------------CCCCchhhH
Q psy11190 158 GSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS-----------------NAPLEVGAA 220 (248)
Q Consensus 158 ~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~-----------------~~~~~~~~~ 220 (248)
+..+. ++...|+++|+++++|+++++.|++++||+||+|+||+++|+|... ....+|+++
T Consensus 162 ~~~~~---~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dv 238 (267)
T 1vl8_A 162 EEVTM---PNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDL 238 (267)
T ss_dssp TCCCS---SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTSSCBCGGGG
T ss_pred hccCC---CCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCccccccccccChHHHHHHHhhCCCCCCcCHHHH
Confidence 77665 7788999999999999999999999999999999999999998532 113589999
Q ss_pred HHHHHHHhhhcccccccceeeeCCee
Q psy11190 221 TAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 221 ~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
++.+++++++.....+|+.+.++|..
T Consensus 239 A~~v~~l~s~~~~~itG~~i~vdGG~ 264 (267)
T 1vl8_A 239 KGVAVFLASEEAKYVTGQIIFVDGGW 264 (267)
T ss_dssp HHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHHHHcCccccCCcCCeEEECCCC
Confidence 99999999987788999999999863
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-40 Score=276.70 Aligned_cols=220 Identities=23% Similarity=0.270 Sum_probs=193.1
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecC-chhHHHHHH-HHhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRN-KDKAVELLA-LAQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~-~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|++|||||++|||+++|++|+++| ++|++.+++ .+.++++.+ +...+.++.++++|++|.++ ++++++++.+.
T Consensus 19 k~~lVTGas~gIG~aia~~l~~~G----~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-v~~~~~~~~~~ 93 (270)
T 3is3_A 19 KVALVTGSGRGIGAAVAVHLGRLG----AKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPE-IVKLFDQAVAH 93 (270)
T ss_dssp CEEEESCTTSHHHHHHHHHHHHTT----CEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHH-HHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCC----CEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHH-HHHHHHHHHHH
Confidence 799999999999999999999999 899997664 455566543 43445689999999999999 99999999999
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCC-C
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIM-G 158 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~-~ 158 (248)
++ ++|+||||||.... .++.+.+.++|++.+++|+.++++++++++|.|.+ .|+||++||.. +
T Consensus 94 ~g--~id~lvnnAg~~~~-~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~-------------~g~iv~isS~~~~ 157 (270)
T 3is3_A 94 FG--HLDIAVSNSGVVSF-GHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTE-------------GGRIVLTSSNTSK 157 (270)
T ss_dssp HS--CCCEEECCCCCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT-------------TCEEEEECCTTTT
T ss_pred cC--CCCEEEECCCCCCC-CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc-------------CCeEEEEeCchhc
Confidence 98 59999999998765 77888999999999999999999999999999864 58999999988 4
Q ss_pred cccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC---------------------------
Q psy11190 159 SIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS--------------------------- 211 (248)
Q Consensus 159 ~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~--------------------------- 211 (248)
..+. ++...|+++|+++++|+++|+.|++++||+||+|+||+++|+|.+.
T Consensus 158 ~~~~---~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 234 (270)
T 3is3_A 158 DFSV---PKHSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPL 234 (270)
T ss_dssp TCCC---TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHSTT
T ss_pred cCCC---CCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcCCC
Confidence 4454 7788999999999999999999999999999999999999998641
Q ss_pred CCCCchhhHHHHHHHHhhhcccccccceeeeCCe
Q psy11190 212 NAPLEVGAATAGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
....+|+|+++.+++++++.....+|+.+.+||.
T Consensus 235 ~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG 268 (270)
T 3is3_A 235 HRNGWPQDVANVVGFLVSKEGEWVNGKVLTLDGG 268 (270)
T ss_dssp CSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred CCCCCHHHHHHHHHHHcCCccCCccCcEEEeCCC
Confidence 0134699999999999999888999999999985
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-40 Score=273.78 Aligned_cols=223 Identities=20% Similarity=0.232 Sum_probs=196.1
Q ss_pred ceEEEecCC-CchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhh--cCCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 2 KSILITGCN-RGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQ--HSNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 2 k~~lVtGas-~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
|++|||||+ +|||+++|++|+++| ++|++++|+.++++++.+.... ..++.++++|++|.++ ++++++++.+
T Consensus 23 k~vlITGasg~GIG~~~a~~l~~~G----~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~-v~~~~~~~~~ 97 (266)
T 3o38_A 23 KVVLVTAAAGTGIGSTTARRALLEG----ADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEA-VDALITQTVE 97 (266)
T ss_dssp CEEEESSCSSSSHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHH-HHHHHHHHHH
T ss_pred CEEEEECCCCCchHHHHHHHHHHCC----CEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHH-HHHHHHHHHH
Confidence 789999998 599999999999999 8999999999888877544432 2478999999999999 9999999999
Q ss_pred hhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 79 VVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
.++ ++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|.+++ ..++||++||..+
T Consensus 98 ~~g--~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~----------~~~~iv~~sS~~~ 164 (266)
T 3o38_A 98 KAG--RLDVLVNNAGLGGQ-TPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVD----------HGGVIVNNASVLG 164 (266)
T ss_dssp HHS--CCCEEEECCCCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSS----------CCEEEEEECCGGG
T ss_pred HhC--CCcEEEECCCcCCC-CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC----------CCeEEEEeCCHHH
Confidence 988 59999999998765 7778889999999999999999999999999998752 4689999999999
Q ss_pred cccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC----------------CCchhhHHH
Q psy11190 159 SIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA----------------PLEVGAATA 222 (248)
Q Consensus 159 ~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~----------------~~~~~~~~~ 222 (248)
..+. +++..|+++|+++++|+++|+.|++++||+||+|+||+++|++.+... ..+|+++++
T Consensus 165 ~~~~---~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~r~~~~~dva~ 241 (266)
T 3o38_A 165 WRAQ---HSQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSSSELLDRLASDEAFGRAAEPWEVAA 241 (266)
T ss_dssp TCCC---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC-----------------CCTTSSCCCHHHHHH
T ss_pred cCCC---CCCchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCcHHHHHHHHhcCCcCCCCCHHHHHH
Confidence 8776 788999999999999999999999999999999999999999864421 347999999
Q ss_pred HHHHHhhhcccccccceeeeCCe
Q psy11190 223 GIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 223 ~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
.+++++++.....+|+++.++|.
T Consensus 242 ~i~~l~s~~~~~~tG~~i~vdgG 264 (266)
T 3o38_A 242 TIAFLASDYSSYMTGEVVSVSSQ 264 (266)
T ss_dssp HHHHHHSGGGTTCCSCEEEESSC
T ss_pred HHHHHcCccccCccCCEEEEcCC
Confidence 99999998888999999999986
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-40 Score=272.52 Aligned_cols=223 Identities=23% Similarity=0.292 Sum_probs=197.4
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHH-HHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|++|||||++|||++++++|+++| ++|++++|+.++++++.+ +...+.++.++++|++|.++ ++++++++.+.+
T Consensus 3 k~vlVTGas~gIG~~ia~~l~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-v~~~~~~~~~~~ 77 (256)
T 1geg_A 3 KVALVTGAGQGIGKAIALRLVKDG----FAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQ-VFAAVEQARKTL 77 (256)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHH-HHHHHHHHHHHT
T ss_pred CEEEEECCCChHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHH-HHHHHHHHHHHh
Confidence 799999999999999999999999 899999999888777643 33334578899999999999 999999999988
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCC-CceEEEeecCCCc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSS-RAAIVNVSSIMGS 159 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~-~~~iv~vss~~~~ 159 (248)
+ ++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|.++ + .++||++||..+.
T Consensus 78 g--~id~lv~nAg~~~~-~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----------~~~g~iv~isS~~~~ 143 (256)
T 1geg_A 78 G--GFDVIVNNAGVAPS-TPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKE-----------GHGGKIINACSQAGH 143 (256)
T ss_dssp T--CCCEEEECCCCCCC-BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----------TSCEEEEEECCGGGT
T ss_pred C--CCCEEEECCCCCCC-CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----------CCCCEEEEECchhhc
Confidence 7 59999999998754 677788999999999999999999999999999875 4 6899999999988
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC--------------------------CC
Q psy11190 160 IEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS--------------------------NA 213 (248)
Q Consensus 160 ~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~--------------------------~~ 213 (248)
.+. ++...|+++|+++++|+++++.|++++||+||+|+||+++|++... ..
T Consensus 144 ~~~---~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r 220 (256)
T 1geg_A 144 VGN---PELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGR 220 (256)
T ss_dssp SCC---TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCS
T ss_pred CCC---CCchhHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHHhcCCCCC
Confidence 776 7788999999999999999999999999999999999999987321 01
Q ss_pred CCchhhHHHHHHHHhhhcccccccceeeeCCee
Q psy11190 214 PLEVGAATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
..+|+++++.+++++++.....+|+.+.++|..
T Consensus 221 ~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~ 253 (256)
T 1geg_A 221 LSEPEDVAACVSYLASPDSDYMTGQSLLIDGGM 253 (256)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSS
T ss_pred CcCHHHHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence 357999999999999887888999999999863
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-40 Score=275.76 Aligned_cols=223 Identities=23% Similarity=0.326 Sum_probs=195.2
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCc-hhHHHHHHHH-hhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNK-DKAVELLALA-QQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~-~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|++|||||++|||+++|++|+++| ++|++++|+. +..+.+.+.. ..+.++.++++|++|.++ ++++++++.+.
T Consensus 30 k~vlITGas~gIG~~la~~l~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-v~~~~~~~~~~ 104 (271)
T 4iin_A 30 KNVLITGASKGIGAEIAKTLASMG----LKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESD-FIEAIQTIVQS 104 (271)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTT----CEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH-HHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC----CEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHH-HHHHHHHHHHh
Confidence 789999999999999999999999 8999999954 4445554433 335588999999999999 99999999998
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
++ ++|+||||||.... ..+.+.+.++|++.+++|+.+++++++.++|.|.++ +.++||++||.++.
T Consensus 105 ~g--~id~li~nAg~~~~-~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-----------~~g~iv~isS~~~~ 170 (271)
T 4iin_A 105 DG--GLSYLVNNAGVVRD-KLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKS-----------RFGSVVNVASIIGE 170 (271)
T ss_dssp HS--SCCEEEECCCCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----------TCEEEEEECCHHHH
T ss_pred cC--CCCEEEECCCcCCC-cccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhc-----------CCCEEEEEechhhc
Confidence 87 59999999998875 677788999999999999999999999999999886 57899999999988
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC---------------CCchhhHHHHH
Q psy11190 160 IEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA---------------PLEVGAATAGI 224 (248)
Q Consensus 160 ~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~---------------~~~~~~~~~~~ 224 (248)
.+. ++...|+++|++++.|+++++.|++++||+||+|+||+++|++.+... ..+|+++++.+
T Consensus 171 ~~~---~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~i 247 (271)
T 4iin_A 171 RGN---MGQTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLKDELKADYVKNIPLNRLGSAKEVAEAV 247 (271)
T ss_dssp HCC---TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC------------CGGGCTTCSCBCHHHHHHHH
T ss_pred CCC---CCchHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhcHHHHHHHHhcCCcCCCcCHHHHHHHH
Confidence 776 788999999999999999999999999999999999999999865422 34799999999
Q ss_pred HHHhhhcccccccceeeeCCee
Q psy11190 225 IQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 225 ~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
+.++++.....+|+.+.+||..
T Consensus 248 ~~l~s~~~~~itG~~i~vdGG~ 269 (271)
T 4iin_A 248 AFLLSDHSSYITGETLKVNGGL 269 (271)
T ss_dssp HHHHSGGGTTCCSCEEEESTTS
T ss_pred HHHhCCCcCCCcCCEEEeCCCe
Confidence 9999988888999999999964
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-40 Score=275.30 Aligned_cols=227 Identities=24% Similarity=0.335 Sum_probs=197.5
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||++|||++++++|+++| ++|++++|+.++++++.+.+...+++.++++|++|.++ ++++++++.+.++
T Consensus 30 k~vlVTGas~gIG~aia~~L~~~G----~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~-v~~~~~~~~~~~g 104 (276)
T 2b4q_A 30 RIALVTGGSRGIGQMIAQGLLEAG----ARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAG-ARRLAQALGELSA 104 (276)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT----CEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHH-HHHHHHHHHHHCS
T ss_pred CEEEEeCCCChHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHH-HHHHHHHHHHhcC
Confidence 789999999999999999999999 89999999988877765444333478889999999999 9999999999887
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|++++.. .+.++||++||.++..+
T Consensus 105 --~iD~lvnnAg~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~-------~~~g~iV~isS~~~~~~ 174 (276)
T 2b4q_A 105 --RLDILVNNAGTSWG-AALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASA-------ENPARVINIGSVAGISA 174 (276)
T ss_dssp --CCSEEEECCCCCCC-CCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCS-------SSCEEEEEECCGGGTCC
T ss_pred --CCCEEEECCCCCCC-CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCC-------CCCCEEEEECCHHHcCC
Confidence 59999999998765 677888999999999999999999999999999875200 01289999999998876
Q ss_pred ccCCCCCc-cchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC-------------C----CCCchhhHHHH
Q psy11190 162 DNTQGGFH-PYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS-------------N----APLEVGAATAG 223 (248)
Q Consensus 162 ~~~~~~~~-~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~-------------~----~~~~~~~~~~~ 223 (248)
. ++.. .|+++|++++.|+++++.|++++||+||+|+||+++|++... . ...+|+++++.
T Consensus 175 ~---~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~ 251 (276)
T 2b4q_A 175 M---GEQAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHIANDPQALEADSASIPMGRWGRPEEMAAL 251 (276)
T ss_dssp C---CCSCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHHHHHCHHHHHHHHHTSTTSSCCCHHHHHHH
T ss_pred C---CCCccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhhcchhHHHHHHhhcCCCCCCcCCHHHHHHH
Confidence 5 6667 899999999999999999999999999999999999998532 1 13489999999
Q ss_pred HHHHhhhcccccccceeeeCCee
Q psy11190 224 IIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 224 ~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
+++++++.....+|+.+.++|..
T Consensus 252 v~~l~s~~~~~~tG~~i~vdGG~ 274 (276)
T 2b4q_A 252 AISLAGTAGAYMTGNVIPIDGGF 274 (276)
T ss_dssp HHHHHSGGGTTCCSCEEEESTTT
T ss_pred HHHHhCccccCCCCCEEEeCCCc
Confidence 99999888888999999999863
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-40 Score=274.80 Aligned_cols=212 Identities=24% Similarity=0.274 Sum_probs=183.3
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||++|||+++|++|+++| ++|++++|+.++++++.+.. ..++.++++|++|.++ ++++++++.+.++
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G----~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~-v~~~~~~~~~~~g 101 (272)
T 4dyv_A 29 KIAIVTGAGSGVGRAVAVALAGAG----YGVALAGRRLDALQETAAEI--GDDALCVPTDVTDPDS-VRALFTATVEKFG 101 (272)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHH--TSCCEEEECCTTSHHH-HHHHHHHHHHHHS
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHHh--CCCeEEEEecCCCHHH-HHHHHHHHHHHcC
Confidence 789999999999999999999999 89999999988877775444 3688999999999999 9999999999998
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+||||||...+..++.+.+.++|++.+++|+.+++++++.++|.|.+++. +.|+||++||..+..+
T Consensus 102 --~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~---------~~g~IV~isS~~~~~~ 170 (272)
T 4dyv_A 102 --RVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEP---------RGGRIINNGSISATSP 170 (272)
T ss_dssp --CCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSS---------CCEEEEEECCSSTTSC
T ss_pred --CCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCC---------CCcEEEEECchhhcCC
Confidence 59999999998765467888999999999999999999999999999988521 2689999999999887
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC--------------CCchhhHHHHHHHH
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA--------------PLEVGAATAGIIQF 227 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~--------------~~~~~~~~~~~~~~ 227 (248)
. ++...|+++|+++++|+++++.|++++||+||+|+||+++|+|.+... ..+|+|+++.++++
T Consensus 171 ~---~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fL 247 (272)
T 4dyv_A 171 R---PYSAPYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMKAGVPQADLSIKVEPVMDVAHVASAVVYM 247 (272)
T ss_dssp C---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC------------------------CHHHHHHHHHHH
T ss_pred C---CCchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhhcccchhhhhcccccCCCCHHHHHHHHHHH
Confidence 7 788899999999999999999999999999999999999999875421 35799999999999
Q ss_pred hhhcccc
Q psy11190 228 IQSLGEA 234 (248)
Q Consensus 228 ~~~~~~~ 234 (248)
++.+...
T Consensus 248 ~s~~~~~ 254 (272)
T 4dyv_A 248 ASLPLDA 254 (272)
T ss_dssp HHSCTTS
T ss_pred hCCCCcC
Confidence 9876554
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-40 Score=275.08 Aligned_cols=223 Identities=23% Similarity=0.230 Sum_probs=191.8
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecC------------chhHHHHHH-HHhhcCCceeEEeeccCCchh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRN------------KDKAVELLA-LAQQHSNLHVIELDVTDFSKQ 68 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~------------~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~ 68 (248)
|++|||||++|||+++|++|+++| ++|++++|+ .+++++..+ +...+.++.++++|++|.++
T Consensus 14 k~vlVTGas~gIG~~ia~~l~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~- 88 (278)
T 3sx2_A 14 KVAFITGAARGQGRAHAVRLAADG----ADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRES- 88 (278)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT----CEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHH-
T ss_pred CEEEEECCCChHHHHHHHHHHHCC----CeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHH-
Confidence 789999999999999999999999 899999987 455555533 33345689999999999999
Q ss_pred hhhHHHHhhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCc
Q psy11190 69 QDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRA 148 (248)
Q Consensus 69 v~~~~~~i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~ 148 (248)
++++++++.+.++ ++|+||||||+... . .+.++|++.+++|+.++++++++++|.|.+++ ..|
T Consensus 89 v~~~~~~~~~~~g--~id~lv~nAg~~~~-~----~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~----------~~g 151 (278)
T 3sx2_A 89 LSAALQAGLDELG--RLDIVVANAGIAPM-S----AGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQG----------TGG 151 (278)
T ss_dssp HHHHHHHHHHHHC--CCCEEEECCCCCCC-S----STHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC----------SCE
T ss_pred HHHHHHHHHHHcC--CCCEEEECCCCCCC-C----CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC----------CCc
Confidence 9999999999988 59999999998653 2 15789999999999999999999999998862 368
Q ss_pred eEEEeecCCCccccc-CCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC---------------
Q psy11190 149 AIVNVSSIMGSIEDN-TQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN--------------- 212 (248)
Q Consensus 149 ~iv~vss~~~~~~~~-~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~--------------- 212 (248)
+||++||.++..+.. +.++...|+++|+++++|+++|+.|++++||+||+|+||+++|+|....
T Consensus 152 ~iv~isS~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~ 231 (278)
T 3sx2_A 152 SIVLISSSAGLAGVGSADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDT 231 (278)
T ss_dssp EEEEECCGGGTSCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHHHHHHHCC-
T ss_pred EEEEEccHHhcCCCccCCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhhHHHHHhhccchhhh
Confidence 999999999876541 1134568999999999999999999999999999999999999997531
Q ss_pred ----------CCCchhhHHHHHHHHhhhcccccccceeeeCCee
Q psy11190 213 ----------APLEVGAATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 213 ----------~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
...+|+|+++.+++++++.....+|+.+.+||..
T Consensus 232 ~~~~~~~~p~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~ 275 (278)
T 3sx2_A 232 PGAMGNAMPVEVLAPEDVANAVAWLVSDQARYITGVTLPVDAGF 275 (278)
T ss_dssp -CTTSCSSSCSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred hhhhhhhcCcCcCCHHHHHHHHHHHhCcccccccCCEEeECCCc
Confidence 1347999999999999998889999999999864
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-40 Score=275.35 Aligned_cols=224 Identities=18% Similarity=0.210 Sum_probs=196.9
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHH-hh--cCCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALA-QQ--HSNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~-~~--~~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
|++|||||++|||++++++|+++| ++|++++|+.++++++.+.. .. +.++.++++|++|.++ ++++++++.+
T Consensus 14 k~vlVTGas~gIG~~ia~~l~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-v~~~~~~~~~ 88 (267)
T 1iy8_A 14 RVVLITGGGSGLGRATAVRLAAEG----AKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQ-VEAYVTATTE 88 (267)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHH-HHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHH-HHHHHHHHHH
Confidence 789999999999999999999999 89999999988877764333 32 4578899999999999 9999999999
Q ss_pred hhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 79 VVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
.++ ++|+||||||......++.+.+.++|++.+++|+.+++++++.++|.|+++ +.++||++||..+
T Consensus 89 ~~g--~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----------~~g~iv~isS~~~ 155 (267)
T 1iy8_A 89 RFG--RIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQ-----------GSGMVVNTASVGG 155 (267)
T ss_dssp HHS--CCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----------TCCEEEEECCGGG
T ss_pred HcC--CCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----------CCCEEEEEcchhh
Confidence 887 599999999986432567778999999999999999999999999999876 5789999999998
Q ss_pred cccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC-------C----------------CCC
Q psy11190 159 SIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS-------N----------------APL 215 (248)
Q Consensus 159 ~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~-------~----------------~~~ 215 (248)
..+. ++...|+++|+++++|+++++.|++++||+||+|+||+++|++... . ...
T Consensus 156 ~~~~---~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~ 232 (267)
T 1iy8_A 156 IRGI---GNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYG 232 (267)
T ss_dssp TSBC---SSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCB
T ss_pred ccCC---CCCccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhccCCCCCCc
Confidence 8776 7788999999999999999999999999999999999999987321 0 124
Q ss_pred chhhHHHHHHHHhhhcccccccceeeeCCee
Q psy11190 216 EVGAATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
+|+++++.+++++++.....+|+.+.++|..
T Consensus 233 ~~~dvA~~v~~l~s~~~~~~tG~~i~vdGG~ 263 (267)
T 1iy8_A 233 EAPEIAAVVAFLLSDDASYVNATVVPIDGGQ 263 (267)
T ss_dssp CHHHHHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred CHHHHHHHHHHHcCccccCCCCCEEEECCCc
Confidence 7999999999999887788999999999863
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-40 Score=270.27 Aligned_cols=218 Identities=20% Similarity=0.247 Sum_probs=193.9
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||++|||++++++|+++| ++|++++|+.++++++.+.. .+.++++|++|.++ ++++++++.+.++
T Consensus 6 k~vlVTGas~giG~~ia~~l~~~G----~~V~~~~r~~~~~~~~~~~~----~~~~~~~D~~~~~~-~~~~~~~~~~~~g 76 (245)
T 1uls_A 6 KAVLITGAAHGIGRATLELFAKEG----ARLVACDIEEGPLREAAEAV----GAHPVVMDVADPAS-VERGFAEALAHLG 76 (245)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHTT----TCEEEECCTTCHHH-HHHHHHHHHHHHS
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHc----CCEEEEecCCCHHH-HHHHHHHHHHHcC
Confidence 789999999999999999999999 89999999987766553322 27889999999999 9999999999988
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|+++ +.++||++||.. ..+
T Consensus 77 --~id~lvn~Ag~~~~-~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-----------~~g~iv~isS~~-~~~ 141 (245)
T 1uls_A 77 --RLDGVVHYAGITRD-NFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREK-----------NPGSIVLTASRV-YLG 141 (245)
T ss_dssp --SCCEEEECCCCCCC-CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-----------CCEEEEEECCGG-GGC
T ss_pred --CCCEEEECCCCCCC-CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----------CCCEEEEEccch-hcC
Confidence 59999999998764 667788999999999999999999999999999875 578999999988 666
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC---------------CCCchhhHHHHHHH
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN---------------APLEVGAATAGIIQ 226 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~---------------~~~~~~~~~~~~~~ 226 (248)
. +++..|+++|+++.+|+++++.|++++||+||+|+||+++|++.... ...+|+++++.+++
T Consensus 142 ~---~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~v~~ 218 (245)
T 1uls_A 142 N---LGQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPEKVREKAIAATPLGRAGKPLEVAYAALF 218 (245)
T ss_dssp C---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCHHHHHHHHHTCTTCSCBCHHHHHHHHHH
T ss_pred C---CCchhHHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhhcCHHHHHHHHhhCCCCCCcCHHHHHHHHHH
Confidence 5 77889999999999999999999999999999999999999986532 13589999999999
Q ss_pred HhhhcccccccceeeeCCee
Q psy11190 227 FIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 227 ~~~~~~~~~~g~~~~~~g~~ 246 (248)
++++.....+|+.+.++|..
T Consensus 219 l~s~~~~~~tG~~~~vdgG~ 238 (245)
T 1uls_A 219 LLSDESSFITGQVLFVDGGR 238 (245)
T ss_dssp HHSGGGTTCCSCEEEESTTT
T ss_pred HhCchhcCCcCCEEEECCCc
Confidence 99987888999999999863
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-40 Score=274.34 Aligned_cols=224 Identities=23% Similarity=0.253 Sum_probs=197.2
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchh--HHHHHHHH-hhcCCceeEEeeccCCchhhhhHHHHhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDK--AVELLALA-QQHSNLHVIELDVTDFSKQQDVLFKDIS 77 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~--~~~~~~~~-~~~~~~~~~~~D~~~~~~~v~~~~~~i~ 77 (248)
.|++|||||++|||++++++|+++| ++|++++|+.++ ++++.+.+ ..+.++.++++|++|.++ ++.+++++.
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-v~~~~~~~~ 76 (258)
T 3a28_C 2 SKVAMVTGGAQGIGRGISEKLAADG----FDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKAN-FDSAIDEAA 76 (258)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHT----CEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHH-HHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCC----CEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHH-HHHHHHHHH
Confidence 3799999999999999999999999 899999999877 66664333 334578899999999999 999999999
Q ss_pred hhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCC-ceEEEeecC
Q psy11190 78 DVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSR-AAIVNVSSI 156 (248)
Q Consensus 78 ~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~-~~iv~vss~ 156 (248)
+.++ ++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|.++ +. ++||++||.
T Consensus 77 ~~~g--~iD~lv~nAg~~~~-~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----------~~~g~iv~isS~ 142 (258)
T 3a28_C 77 EKLG--GFDVLVNNAGIAQI-KPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDEL-----------GVKGKIINAASI 142 (258)
T ss_dssp HHHT--CCCEEEECCCCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----------TCCCEEEEECCG
T ss_pred HHhC--CCCEEEECCCCCCC-CChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhc-----------CCCcEEEEECcc
Confidence 9887 59999999998754 677788999999999999999999999999999875 44 899999999
Q ss_pred CCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC-------------C-----------
Q psy11190 157 MGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS-------------N----------- 212 (248)
Q Consensus 157 ~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~-------------~----------- 212 (248)
.+..+. ++...|+++|+++++|+++++.|++++||+||+|+||+++|+|... .
T Consensus 143 ~~~~~~---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 219 (258)
T 3a28_C 143 AAIQGF---PILSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIA 219 (258)
T ss_dssp GGTSCC---TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCCTTHHHHHHHTTCT
T ss_pred hhccCC---CCchhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhhhhhhhccccCCchHHHHHHHHhcCC
Confidence 988776 7788999999999999999999999999999999999999987321 0
Q ss_pred --CCCchhhHHHHHHHHhhhcccccccceeeeCCee
Q psy11190 213 --APLEVGAATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 213 --~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
...+|+++++.+++++++.....+|+.+.++|..
T Consensus 220 ~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~ 255 (258)
T 3a28_C 220 LGRPSVPEDVAGLVSFLASENSNYVTGQVMLVDGGM 255 (258)
T ss_dssp TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSS
T ss_pred CCCccCHHHHHHHHHHHhCcccCCCCCCEEEECCCE
Confidence 1357999999999999888888999999999863
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-40 Score=270.86 Aligned_cols=221 Identities=23% Similarity=0.271 Sum_probs=174.9
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHH-HHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELL-ALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|++|||||++|||+++|++|+++| ++|++++|+.++++++. ++.....++.++++|++|.++ ++.+++++.+.+
T Consensus 10 k~vlITGas~giG~~~a~~l~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~~ 84 (253)
T 3qiv_A 10 KVGIVTGSGGGIGQAYAEALAREG----AAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPES-AKAMADRTLAEF 84 (253)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHH-HHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCC----CEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHH-HHHHHHHHHHHc
Confidence 799999999999999999999999 89999999999888874 444445678999999999999 999999999998
Q ss_pred cCCCccEEEeccccCC--ccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 81 KDQGLNVLVNNAGIAA--KFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
+ ++|+||||||... ...++.+.+.++|++.+++|+.+++++++.++|.|.++ +.++||++||.++
T Consensus 85 g--~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----------~~g~iv~isS~~~ 151 (253)
T 3qiv_A 85 G--GIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKR-----------GGGAIVNQSSTAA 151 (253)
T ss_dssp S--CCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------TCEEEEEECC---
T ss_pred C--CCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-----------CCCEEEEECCccc
Confidence 7 5999999999842 23566788999999999999999999999999999886 5789999999887
Q ss_pred cccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC----------------CCchhhHHH
Q psy11190 159 SIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA----------------PLEVGAATA 222 (248)
Q Consensus 159 ~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~----------------~~~~~~~~~ 222 (248)
. .+...|+++|+++++|+++++.|++++||+||+|+||+++|++.+... ..+|+++++
T Consensus 152 ~------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~ 225 (253)
T 3qiv_A 152 W------LYSNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTPKEMVDDIVKGLPLSRMGTPDDLVG 225 (253)
T ss_dssp --------------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC-------------------------------CCHHHH
T ss_pred c------CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCcHHHHHHHhccCCCCCCCCHHHHHH
Confidence 5 345679999999999999999999999999999999999999865421 246999999
Q ss_pred HHHHHhhhcccccccceeeeCCee
Q psy11190 223 GIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 223 ~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
.++.++++.....+|+.+.++|..
T Consensus 226 ~~~~l~s~~~~~~tG~~~~vdgG~ 249 (253)
T 3qiv_A 226 MCLFLLSDEASWITGQIFNVDGGQ 249 (253)
T ss_dssp HHHHHHSGGGTTCCSCEEEC----
T ss_pred HHHHHcCccccCCCCCEEEECCCe
Confidence 999999988888999999999864
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-39 Score=270.83 Aligned_cols=246 Identities=55% Similarity=0.924 Sum_probs=207.4
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
||++|||||++|||++++++|+++|+ .+++|++++|+.++.+.+.++.....++.++.+|++|.++ ++.+++++.+.+
T Consensus 21 ~k~vlITGasggIG~~la~~L~~~G~-~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~-v~~~~~~~~~~~ 98 (267)
T 1sny_A 21 MNSILITGCNRGLGLGLVKALLNLPQ-PPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDA-YDKLVADIEGVT 98 (267)
T ss_dssp CSEEEESCCSSHHHHHHHHHHHTSSS-CCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGG-HHHHHHHHHHHH
T ss_pred CCEEEEECCCCcHHHHHHHHHHhcCC-CCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHH-HHHHHHHHHHhc
Confidence 58999999999999999999998882 1258999999988776665555556689999999999999 999999999988
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+..++|+||||||...+..++.+.+.+++++.+++|+.+++++++.++|.|.++.........+.+.++||++||..+..
T Consensus 99 g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~ 178 (267)
T 1sny_A 99 KDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSI 178 (267)
T ss_dssp GGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCS
T ss_pred CCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEecccccc
Confidence 73249999999998763366777889999999999999999999999999987521110000011258999999999877
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCCCCchhhHHHHHHHHhhhccccccccee
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQSLGEAHNGGFF 240 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 240 (248)
+..+.++...|+++|++++.|++.++.+++++||++++|+||+++|+|.....+.+|+++++.++..+.......+|+++
T Consensus 179 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~G~~~ 258 (267)
T 1sny_A 179 QGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGSSAPLDVPTSTGQIVQTISKLGEKQNGGFV 258 (267)
T ss_dssp TTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCTTCSBCHHHHHHHHHHHHHHCCGGGTTCEE
T ss_pred cCCCCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCCCCCCCHHHHHHHHHHHHHhcCcCCCCcEE
Confidence 65333467789999999999999999999999999999999999999998778899999999999999988888999999
Q ss_pred eeCCeecC
Q psy11190 241 EYTGKAIK 248 (248)
Q Consensus 241 ~~~g~~~~ 248 (248)
.++|+.+|
T Consensus 259 ~~~g~~~~ 266 (267)
T 1sny_A 259 NYDGTPLA 266 (267)
T ss_dssp CTTSCBCC
T ss_pred ccCCcCcC
Confidence 99999875
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-40 Score=273.88 Aligned_cols=225 Identities=20% Similarity=0.219 Sum_probs=184.9
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||++|||+++|++|+++| ++|++++|+.+++++..+.. ..++.++++|++|.++ ++++++++.+.++
T Consensus 8 k~~lVTGas~gIG~aia~~l~~~G----~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~-v~~~~~~~~~~~g 80 (257)
T 3tpc_A 8 RVFIVTGASSGLGAAVTRMLAQEG----ATVLGLDLKPPAGEEPAAEL--GAAVRFRNADVTNEAD-ATAALAFAKQEFG 80 (257)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT----CEEEEEESSCC--------------CEEEECCTTCHHH-HHHHHHHHHHHHS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC----CEEEEEeCChHHHHHHHHHh--CCceEEEEccCCCHHH-HHHHHHHHHHHcC
Confidence 789999999999999999999999 89999999998877664333 4578899999999999 9999999999998
Q ss_pred CCCccEEEeccccCCccccC----CCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCC
Q psy11190 82 DQGLNVLVNNAGIAAKFTRL----GLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIM 157 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~ 157 (248)
++|+||||||.... ..+ .+.+.++|++.+++|+.++++++++++|.|.++.... ..+.|+||++||..
T Consensus 81 --~id~lv~nAg~~~~-~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~-----~~~~g~iv~isS~~ 152 (257)
T 3tpc_A 81 --HVHGLVNCAGTAPG-EKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDA-----DGERGVIVNTASIA 152 (257)
T ss_dssp --CCCEEEECCCCCCC-CCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCT-----TSCCEEEEEECCTH
T ss_pred --CCCEEEECCCCCCC-CccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccC-----CCCCeEEEEEechh
Confidence 59999999998754 222 3578899999999999999999999999998742110 01468999999999
Q ss_pred CcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC----------------CCCchhhHH
Q psy11190 158 GSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN----------------APLEVGAAT 221 (248)
Q Consensus 158 ~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~----------------~~~~~~~~~ 221 (248)
+..+. ++...|+++|+++++|+++++.|++++||+||+|+||+++|++.... ...+|++++
T Consensus 153 ~~~~~---~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~~r~~~~~dva 229 (257)
T 3tpc_A 153 AFDGQ---IGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMPQDVQDALAASVPFPPRLGRAEEYA 229 (257)
T ss_dssp HHHCC---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC--------------CCSSSSCSCBCHHHHH
T ss_pred hccCC---CCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCCHHHHHHHHhcCCCCCCCCCHHHHH
Confidence 98877 78899999999999999999999999999999999999999986431 134799999
Q ss_pred HHHHHHhhhcccccccceeeeCCee
Q psy11190 222 AGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 222 ~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
+.+++++++ ...+|+.+.+||..
T Consensus 230 ~~v~~l~s~--~~itG~~i~vdGG~ 252 (257)
T 3tpc_A 230 ALVKHICEN--TMLNGEVIRLDGAL 252 (257)
T ss_dssp HHHHHHHHC--TTCCSCEEEESTTC
T ss_pred HHHHHHccc--CCcCCcEEEECCCc
Confidence 999999875 68899999999863
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-40 Score=271.79 Aligned_cols=221 Identities=22% Similarity=0.309 Sum_probs=191.4
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHH-HHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELL-ALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|++|||||++|||+++|++|+++| ++|++++|+.++++++. ++...+.++.++++|++|.++ ++.+++.+.+.+
T Consensus 30 k~vlITGas~gIG~~la~~l~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-v~~~~~~~~~~~ 104 (262)
T 3rkr_A 30 QVAVVTGASRGIGAAIARKLGSLG----ARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDA-IAAFATGVLAAH 104 (262)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHH-HHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHH-HHHHHHHHHHhc
Confidence 789999999999999999999999 89999999999888874 444445678999999999999 999999999998
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+ ++|+||||||......++.+.+.++|++.+++|+.+++++++.++|.|.++ +.|+||++||..+..
T Consensus 105 g--~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-----------~~g~iv~isS~~~~~ 171 (262)
T 3rkr_A 105 G--RCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAA-----------KRGHIINISSLAGKN 171 (262)
T ss_dssp S--CCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----------TCCEEEEECSSCSSC
T ss_pred C--CCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-----------CCceEEEEechhhcC
Confidence 8 599999999985444677888999999999999999999999999999875 578999999999988
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC-------CCchhhHHHHHHHHhhhccc
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA-------PLEVGAATAGIIQFIQSLGE 233 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~-------~~~~~~~~~~~~~~~~~~~~ 233 (248)
+. ++...|+++|+++++|+++++.|++++||+|++|+||+++|+|..... ..+|+++++.++.++++...
T Consensus 172 ~~---~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~p~dvA~~v~~l~s~~~~ 248 (262)
T 3rkr_A 172 PV---ADGAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGLSAKKSALGAIEPDDIADVVALLATQADQ 248 (262)
T ss_dssp CC---TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------------CCCHHHHHHHHHHHHTCCTT
T ss_pred CC---CCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCcccccccccccccCCCHHHHHHHHHHHhcCccc
Confidence 76 788999999999999999999999999999999999999999975432 46899999999999999888
Q ss_pred ccccceeeeC
Q psy11190 234 AHNGGFFEYT 243 (248)
Q Consensus 234 ~~~g~~~~~~ 243 (248)
..+|+++-..
T Consensus 249 ~~~g~~~i~p 258 (262)
T 3rkr_A 249 SFISEVLVRP 258 (262)
T ss_dssp CCEEEEEEEC
T ss_pred cccCcEEecc
Confidence 8888776544
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-40 Score=275.08 Aligned_cols=223 Identities=19% Similarity=0.204 Sum_probs=196.9
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHH-hhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALA-QQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|++|||||++|||++++++|+++| ++|++++|+.++++++.+.. ..+.++.++++|++|.++ ++.+++++.+.+
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~~ 82 (262)
T 1zem_A 8 KVCLVTGAGGNIGLATALRLAEEG----TAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEA-VIGTVDSVVRDF 82 (262)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHH-HHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHH-HHHHHHHHHHHh
Confidence 789999999999999999999999 89999999988877774433 334578899999999999 999999999998
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+ ++|+||||||......++.+.+.++|++.+++|+.+++++++.++|.|.++ +.|+||++||..+..
T Consensus 83 g--~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----------~~g~iv~isS~~~~~ 149 (262)
T 1zem_A 83 G--KIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQ-----------NYGRIVNTASMAGVK 149 (262)
T ss_dssp S--CCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----------TCEEEEEECCHHHHS
T ss_pred C--CCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----------CCcEEEEEcchhhcc
Confidence 7 599999999986233677788999999999999999999999999999876 578999999999887
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC------------------C----------
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS------------------N---------- 212 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~------------------~---------- 212 (248)
+. ++...|+++|+++..|+++++.|++++||+||+|+||+++|+|... .
T Consensus 150 ~~---~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (262)
T 1zem_A 150 GP---PNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSV 226 (262)
T ss_dssp CC---TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTS
T ss_pred CC---CCCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHHHHHhcC
Confidence 76 7788999999999999999999999999999999999999987321 0
Q ss_pred ---CCCchhhHHHHHHHHhhhcccccccceeeeCCe
Q psy11190 213 ---APLEVGAATAGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 213 ---~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
...+|+++++.+++++++.....+|+.+.+||.
T Consensus 227 p~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG 262 (262)
T 1zem_A 227 PMRRYGDINEIPGVVAFLLGDDSSFMTGVNLPIAGG 262 (262)
T ss_dssp TTSSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred CCCCCcCHHHHHHHHHHHcCchhcCcCCcEEecCCC
Confidence 124799999999999998888899999999984
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-40 Score=271.80 Aligned_cols=221 Identities=24% Similarity=0.326 Sum_probs=195.4
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhh-c-CCceeEEeec--cCCchhhhhHHHHhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQ-H-SNLHVIELDV--TDFSKQQDVLFKDIS 77 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~-~-~~~~~~~~D~--~~~~~~v~~~~~~i~ 77 (248)
|+++||||++|||++++++|+++| ++|++++|+.++++++.+.... + .+..++.+|+ ++.++ ++.+++++.
T Consensus 15 k~vlITGas~gIG~~ia~~l~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~-~~~~~~~~~ 89 (247)
T 3i1j_A 15 RVILVTGAARGIGAAAARAYAAHG----ASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQ-YRELAARVE 89 (247)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHH-HHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCC----CEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHH-HHHHHHHHH
Confidence 789999999999999999999999 8999999999988887544433 2 4677888888 88888 999999999
Q ss_pred hhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCC
Q psy11190 78 DVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIM 157 (248)
Q Consensus 78 ~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~ 157 (248)
+.++ ++|+||||||...+..++.+.+.++|++.+++|+.+++++++.++|.|+++ +.++||++||..
T Consensus 90 ~~~g--~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-----------~~~~iv~isS~~ 156 (247)
T 3i1j_A 90 HEFG--RLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRS-----------EDASIAFTSSSV 156 (247)
T ss_dssp HHHS--CCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTS-----------SSEEEEEECCGG
T ss_pred HhCC--CCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-----------CCCeEEEEcchh
Confidence 9988 599999999987555778888999999999999999999999999999875 578999999999
Q ss_pred CcccccCCCCCccchhhHHHHHHHHHHHHhhccC-CCeEEEEecCcceecCCCCC-------CCCCchhhHHHHHHHHhh
Q psy11190 158 GSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKG-DKIIATAMHPGWVKTDMGGS-------NAPLEVGAATAGIIQFIQ 229 (248)
Q Consensus 158 ~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~-~~i~v~~v~PG~v~t~~~~~-------~~~~~~~~~~~~~~~~~~ 229 (248)
+..+. +++..|+++|+++++|+++|+.|+++ +||+||+|+||+++|+|... .....|+++++.++++++
T Consensus 157 ~~~~~---~~~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~p~dva~~~~~l~s 233 (247)
T 3i1j_A 157 GRKGR---ANWGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGMRAQAYPDENPLNNPAPEDIMPVYLYLMG 233 (247)
T ss_dssp GTSCC---TTCHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHHHHHHSTTSCGGGSCCGGGGTHHHHHHHS
T ss_pred hcCCC---CCcchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCccchhcccccCccCCCCHHHHHHHHHHHhC
Confidence 98876 78899999999999999999999976 89999999999999987432 124579999999999999
Q ss_pred hcccccccceeeeC
Q psy11190 230 SLGEAHNGGFFEYT 243 (248)
Q Consensus 230 ~~~~~~~g~~~~~~ 243 (248)
+.....+|+.+..+
T Consensus 234 ~~~~~itG~~i~~~ 247 (247)
T 3i1j_A 234 PDSTGINGQALNAQ 247 (247)
T ss_dssp GGGTTCCSCEEECC
T ss_pred chhccccCeeecCC
Confidence 98889999998753
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-39 Score=266.43 Aligned_cols=221 Identities=22% Similarity=0.244 Sum_probs=195.1
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHH-HH-hhcCCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LA-QQHSNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~-~~-~~~~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
||++|||||++|||+++|++|+++| ++|++++|+.++++++.+ +. ..+.++.++++|++|.++ ++++++++.+
T Consensus 2 ~k~vlITGas~gIG~~ia~~l~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-v~~~~~~~~~ 76 (235)
T 3l77_A 2 MKVAVITGASRGIGEAIARALARDG----YALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAES-VEEFSKKVLE 76 (235)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHH-HHHHCC-HHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHH-HHHHHHHHHH
Confidence 7899999999999999999999999 899999999988887743 33 335688999999999999 9999999999
Q ss_pred hhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 79 VVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
.++ ++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|.+ ..+++|+++|..+
T Consensus 77 ~~g--~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~------------~~~~ii~~sS~~~ 141 (235)
T 3l77_A 77 RFG--DVDVVVANAGLGYF-KRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKR------------TGGLALVTTSDVS 141 (235)
T ss_dssp HHS--SCSEEEECCCCCCC-CCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH------------HTCEEEEECCGGG
T ss_pred hcC--CCCEEEECCccccc-cCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh------------cCCcEEEEecchh
Confidence 987 59999999998765 78888999999999999999999999999999955 4688999999888
Q ss_pred cccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC-------CCchhhHHHHHHHHhhhc
Q psy11190 159 SIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA-------PLEVGAATAGIIQFIQSL 231 (248)
Q Consensus 159 ~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~-------~~~~~~~~~~~~~~~~~~ 231 (248)
..+. +....|+++|+++++|+++++. ..+||+||+|+||+++|+|.+... ..+|+++++.+++++++.
T Consensus 142 ~~~~---~~~~~Y~~sKaa~~~~~~~l~~--~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~p~dva~~v~~l~~~~ 216 (235)
T 3l77_A 142 ARLI---PYGGGYVSTKWAARALVRTFQI--ENPDVRFFELRPGAVDTYFGGSKPGKPKEKGYLKPDEIAEAVRCLLKLP 216 (235)
T ss_dssp SSCC---TTCHHHHHHHHHHHHHHHHHHH--HCTTSEEEEEEECSBSSSTTTCCSCCCGGGTCBCHHHHHHHHHHHHTSC
T ss_pred cccC---CCcchHHHHHHHHHHHHHHHhh--cCCCeEEEEEeCCccccccccccCCcccccCCCCHHHHHHHHHHHHcCC
Confidence 8776 7788999999999999999954 477999999999999999976643 368999999999999998
Q ss_pred ccccccceeeeCCee
Q psy11190 232 GEAHNGGFFEYTGKA 246 (248)
Q Consensus 232 ~~~~~g~~~~~~g~~ 246 (248)
....+|+++-.++..
T Consensus 217 ~~~~~~~~~~~~~~~ 231 (235)
T 3l77_A 217 KDVRVEELMLRSVYQ 231 (235)
T ss_dssp TTCCCCEEEECCTTS
T ss_pred CCCccceEEEeeccc
Confidence 888899988877754
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-39 Score=269.07 Aligned_cols=215 Identities=24% Similarity=0.332 Sum_probs=189.8
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHH-hhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALA-QQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|++|||||++|||++++++|+++| ++|++++|+.++++++.+.+ ..+.++.++++|++|.++ ++.+++++.+.+
T Consensus 8 k~~lVTGas~gIG~aia~~l~~~G----~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~-~~~~~~~~~~~~ 82 (247)
T 2jah_A 8 KVALITGASSGIGEATARALAAEG----AAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQG-VDAAVASTVEAL 82 (247)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH-HHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHH-HHHHHHHHHHHc
Confidence 789999999999999999999999 89999999988887774433 334578899999999999 999999999988
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+ ++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|.++ + |+||++||..+..
T Consensus 83 g--~id~lv~nAg~~~~-~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----------~-g~iv~isS~~~~~ 147 (247)
T 2jah_A 83 G--GLDILVNNAGIMLL-GPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRS-----------K-GTVVQMSSIAGRV 147 (247)
T ss_dssp S--CCSEEEECCCCCCC-CCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----------T-CEEEEECCGGGTC
T ss_pred C--CCCEEEECCCCCCC-CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC-----------C-CEEEEEccHHhcC
Confidence 7 59999999998754 778888999999999999999999999999999875 4 8999999999987
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC--------------C--CchhhHHHHH
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA--------------P--LEVGAATAGI 224 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~--------------~--~~~~~~~~~~ 224 (248)
+. ++...|+++|+++.+|+++++.|++++||+||+|+||+++|+|..... . .+|+++++.+
T Consensus 148 ~~---~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v 224 (247)
T 2jah_A 148 NV---RNAAVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITHTATKEMYEQRISQIRKLQAQDIAEAV 224 (247)
T ss_dssp CC---TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCCHHHHHHHHHHTTTSCCBCHHHHHHHH
T ss_pred CC---CCCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcccchhhHHHHHhcccccCCCCHHHHHHHH
Confidence 76 778899999999999999999999999999999999999999854311 2 6899999999
Q ss_pred HHHhhhcccccccce
Q psy11190 225 IQFIQSLGEAHNGGF 239 (248)
Q Consensus 225 ~~~~~~~~~~~~g~~ 239 (248)
++++++.....++.+
T Consensus 225 ~~l~s~~~~~~~~~i 239 (247)
T 2jah_A 225 RYAVTAPHHATVHEI 239 (247)
T ss_dssp HHHHHSCTTEEEEEE
T ss_pred HHHhCCCccCccceE
Confidence 999988666555544
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-40 Score=275.68 Aligned_cols=220 Identities=22% Similarity=0.265 Sum_probs=186.9
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHH-HHhhcCC-ceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSN-LHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~-~~~~~~~-~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|++|||||++|||+++|++|+++| ++|++++|+.++++++.+ +....+. +.++++|++|.++ ++++++++.+.
T Consensus 34 k~~lVTGas~GIG~aia~~la~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~-v~~~~~~~~~~ 108 (281)
T 4dry_A 34 RIALVTGGGTGVGRGIAQALSAEG----YSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQ-VAALFAAVRAE 108 (281)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHH-HHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHH-HHHHHHHHHHH
Confidence 789999999999999999999999 899999999988887743 3333344 4899999999999 99999999999
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
++ ++|+||||||......++.+.+.++|++.+++|+.+++++++.++|.|.++.. +.|+||++||.++.
T Consensus 109 ~g--~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~---------~~g~IV~isS~~~~ 177 (281)
T 4dry_A 109 FA--RLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTP---------RGGRIINNGSISAQ 177 (281)
T ss_dssp HS--CCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSS---------CCEEEEEECCGGGT
T ss_pred cC--CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC---------CCcEEEEECCHHhC
Confidence 88 59999999998755467888999999999999999999999999999987521 26899999999998
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC--------------CCCchhhHHHHHH
Q psy11190 160 IEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN--------------APLEVGAATAGII 225 (248)
Q Consensus 160 ~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~--------------~~~~~~~~~~~~~ 225 (248)
.+. ++...|+++|+++++|+++++.|++++||+||+|+||+++|+|.... ...+|+|+++.++
T Consensus 178 ~~~---~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~ 254 (281)
T 4dry_A 178 TPR---PNSAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARMSTGVLQANGEVAAEPTIPIEHIAEAVV 254 (281)
T ss_dssp CCC---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-------CEEECTTSCEEECCCBCHHHHHHHHH
T ss_pred CCC---CCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhhcchhhhhhhcccccCCCCHHHHHHHHH
Confidence 877 88899999999999999999999999999999999999999987542 1468999999999
Q ss_pred HHhhhcccc-ccccee
Q psy11190 226 QFIQSLGEA-HNGGFF 240 (248)
Q Consensus 226 ~~~~~~~~~-~~g~~~ 240 (248)
++++.+... .++..+
T Consensus 255 fL~s~~~~~~i~~~~i 270 (281)
T 4dry_A 255 YMASLPLSANVLTMTV 270 (281)
T ss_dssp HHHHSCTTEEEEEEEE
T ss_pred HHhCCCccCccccEEE
Confidence 999876543 333333
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-40 Score=277.94 Aligned_cols=222 Identities=23% Similarity=0.279 Sum_probs=196.0
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhH-HHHHHHHh-hcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKA-VELLALAQ-QHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~-~~~~~~~~-~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|++|||||++|||+++|++|+++| ++|++++|+.+.. +.+.+... .+.++.++++|++|.++ ++++++++.+.
T Consensus 48 k~vlVTGas~GIG~aia~~la~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~-v~~~~~~~~~~ 122 (291)
T 3ijr_A 48 KNVLITGGDSGIGRAVSIAFAKEG----ANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQH-CKDIVQETVRQ 122 (291)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT----CEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHH-HHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC----CEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHH-HHHHHHHHHHH
Confidence 799999999999999999999999 8999999997643 33444333 34588999999999999 99999999999
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
++ ++|+||||||...+...+.+.+.++|++.+++|+.+++++++.++|.|++ .++||++||..+.
T Consensus 123 ~g--~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~-------------~g~iv~isS~~~~ 187 (291)
T 3ijr_A 123 LG--SLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQ-------------GDVIINTASIVAY 187 (291)
T ss_dssp HS--SCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCT-------------TCEEEEECCTHHH
T ss_pred cC--CCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh-------------CCEEEEEechHhc
Confidence 98 59999999998765467788899999999999999999999999999853 5799999999998
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC----------------CCCCchhhHHHH
Q psy11190 160 IEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS----------------NAPLEVGAATAG 223 (248)
Q Consensus 160 ~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~----------------~~~~~~~~~~~~ 223 (248)
.+. ++...|+++|+++++|+++++.|++++||+||+|+||+++|++... ....+|+|+++.
T Consensus 188 ~~~---~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~ 264 (291)
T 3ijr_A 188 EGN---ETLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFDEKKVSQFGSNVPMQRPGQPYELAPA 264 (291)
T ss_dssp HCC---TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHSCHHHHHHTTTTSTTSSCBCGGGTHHH
T ss_pred CCC---CCChhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccCCHHHHHHHHccCCCCCCcCHHHHHHH
Confidence 776 7888999999999999999999999999999999999999997421 113589999999
Q ss_pred HHHHhhhcccccccceeeeCCee
Q psy11190 224 IIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 224 ~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
+++++++.....+|+.+.+||..
T Consensus 265 v~~L~s~~~~~itG~~i~vdGG~ 287 (291)
T 3ijr_A 265 YVYLASSDSSYVTGQMIHVNGGV 287 (291)
T ss_dssp HHHHHSGGGTTCCSCEEEESSSC
T ss_pred HHHHhCCccCCCcCCEEEECCCc
Confidence 99999998889999999999964
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-40 Score=277.99 Aligned_cols=222 Identities=22% Similarity=0.254 Sum_probs=194.6
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCch--hHHHHHHHHh-hcCCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKD--KAVELLALAQ-QHSNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~--~~~~~~~~~~-~~~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
|++|||||++|||+++|++|+++| ++|++.+|+.+ ..+++.+... .+.++.++++|++|.++ ++++++++.+
T Consensus 50 k~vlVTGas~GIG~aia~~la~~G----~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~-v~~~~~~~~~ 124 (294)
T 3r3s_A 50 RKALVTGGDSGIGRAAAIAYAREG----ADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESF-ARSLVHKARE 124 (294)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT----CEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHH-HHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC----CEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHH-HHHHHHHHHH
Confidence 799999999999999999999999 89999998743 3444544333 35688999999999999 9999999999
Q ss_pred hhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 79 VVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
.++ ++|+||||||......++.+.+.++|++.+++|+.+++++++.++|.|.+ .|+||++||..+
T Consensus 125 ~~g--~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~-------------~g~Iv~isS~~~ 189 (294)
T 3r3s_A 125 ALG--GLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPK-------------GASIITTSSIQA 189 (294)
T ss_dssp HHT--CCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCT-------------TCEEEEECCGGG
T ss_pred HcC--CCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc-------------CCEEEEECChhh
Confidence 988 59999999998754467788899999999999999999999999999853 589999999999
Q ss_pred cccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC-----------------CCCCchhhHH
Q psy11190 159 SIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS-----------------NAPLEVGAAT 221 (248)
Q Consensus 159 ~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~-----------------~~~~~~~~~~ 221 (248)
..+. ++...|+++|+++++|+++|+.|++++||+||+|+||+++|++... ....+|+|++
T Consensus 190 ~~~~---~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA 266 (294)
T 3r3s_A 190 YQPS---PHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELA 266 (294)
T ss_dssp TSCC---TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTSCGGGSTTTTTTSTTSSCBCGGGGH
T ss_pred ccCC---CCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCCCHHHHHHHHhcCCCCCCcCHHHHH
Confidence 8876 7889999999999999999999999999999999999999987211 0135799999
Q ss_pred HHHHHHhhhcccccccceeeeCCee
Q psy11190 222 AGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 222 ~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
+.+++++++.....+|+.+.+||..
T Consensus 267 ~~v~~L~s~~~~~itG~~i~vdGG~ 291 (294)
T 3r3s_A 267 PVYVYLASQESSYVTAEVHGVCGGE 291 (294)
T ss_dssp HHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred HHHHHHhCccccCCCCCEEEECCCc
Confidence 9999999998899999999999863
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-40 Score=278.37 Aligned_cols=222 Identities=14% Similarity=0.180 Sum_probs=194.7
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCch-------hHHHH-HHHHhhcCCceeEEeeccCCchhhhhHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKD-------KAVEL-LALAQQHSNLHVIELDVTDFSKQQDVLF 73 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~-------~~~~~-~~~~~~~~~~~~~~~D~~~~~~~v~~~~ 73 (248)
|++|||||++|||+++|++|+++| ++|++++|+.+ .++++ .++...+.++.++++|++|.++ +++++
T Consensus 10 k~vlVTGas~GIG~aia~~l~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-v~~~~ 84 (285)
T 3sc4_A 10 KTMFISGGSRGIGLAIAKRVAADG----ANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDA-VAAAV 84 (285)
T ss_dssp CEEEEESCSSHHHHHHHHHHHTTT----CEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHH-HHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC----CEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHH-HHHHH
Confidence 799999999999999999999999 89999999977 34555 3344445689999999999999 99999
Q ss_pred HHhhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEe
Q psy11190 74 KDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNV 153 (248)
Q Consensus 74 ~~i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~v 153 (248)
+++.+.++ ++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|+++ +.++||++
T Consensus 85 ~~~~~~~g--~id~lvnnAg~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-----------~~g~iv~i 150 (285)
T 3sc4_A 85 AKTVEQFG--GIDICVNNASAINL-GSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGR-----------DNPHILTL 150 (285)
T ss_dssp HHHHHHHS--CCSEEEECCCCCCC-CCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTS-----------SSCEEEEC
T ss_pred HHHHHHcC--CCCEEEECCCCCCC-CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----------CCcEEEEE
Confidence 99999988 59999999998865 788889999999999999999999999999999875 57899999
Q ss_pred ecCCCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCc-ceecCCCCC--------CCCCchhhHHHHH
Q psy11190 154 SSIMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPG-WVKTDMGGS--------NAPLEVGAATAGI 224 (248)
Q Consensus 154 ss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG-~v~t~~~~~--------~~~~~~~~~~~~~ 224 (248)
||..+..+.. ++...|+++|+++++|+++|+.|++++||+||+|+|| +++|++.+. ....+|+++++.+
T Consensus 151 sS~~~~~~~~--~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~~~~~~~~~~~~~~r~~~pedvA~~~ 228 (285)
T 3sc4_A 151 SPPIRLEPKW--LRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATAAVQNLLGGDEAMARSRKPEVYADAA 228 (285)
T ss_dssp CCCCCCSGGG--SCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCHHHHHHHTSCCCCTTCBCTHHHHHHH
T ss_pred CChhhccCCC--CCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccHHHHhhccccccccCCCCHHHHHHHH
Confidence 9999877631 4568899999999999999999999999999999999 689986432 1246899999999
Q ss_pred HHHhhhcccccccceeeeCCe
Q psy11190 225 IQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 225 ~~~~~~~~~~~~g~~~~~~g~ 245 (248)
++++++.. ..+|+.+..+|.
T Consensus 229 ~~l~s~~~-~~tG~~i~~dgg 248 (285)
T 3sc4_A 229 YVVLNKPS-SYTGNTLLCEDV 248 (285)
T ss_dssp HHHHTSCT-TCCSCEEEHHHH
T ss_pred HHHhCCcc-cccceEEEEcCc
Confidence 99999887 889999887763
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-40 Score=275.71 Aligned_cols=219 Identities=19% Similarity=0.258 Sum_probs=191.6
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHH-HHhh--cCCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQ--HSNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~-~~~~--~~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
|++|||||++|||+++|++|+++| ++|++++|+.+++++..+ +... ...+.++.+|+++.++ ++++++
T Consensus 11 k~~lVTGas~gIG~aia~~l~~~G----~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~-~~~~~~---- 81 (267)
T 3t4x_A 11 KTALVTGSTAGIGKAIATSLVAEG----ANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQG-CQDVIE---- 81 (267)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTT----CEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHH-HHHHHH----
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHH-HHHHHH----
Confidence 689999999999999999999999 899999999988877743 3333 2357789999999888 776654
Q ss_pred hhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 79 VVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
.++ ++|+||||||...+ .++.+.+.++|++.+++|+.+++++++.++|.|.++ +.|+||++||..+
T Consensus 82 ~~g--~id~lv~nAg~~~~-~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-----------~~g~iv~isS~~~ 147 (267)
T 3t4x_A 82 KYP--KVDILINNLGIFEP-VEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIER-----------KEGRVIFIASEAA 147 (267)
T ss_dssp HCC--CCSEEEECCCCCCC-CCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----------TEEEEEEECCGGG
T ss_pred hcC--CCCEEEECCCCCCC-CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-----------CCCEEEEEcchhh
Confidence 344 59999999998865 677888999999999999999999999999999886 5789999999999
Q ss_pred cccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC---------------------------
Q psy11190 159 SIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS--------------------------- 211 (248)
Q Consensus 159 ~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~--------------------------- 211 (248)
..+. ++...|+++|+++++|+++++.|++++||+||+|+||+++|++...
T Consensus 148 ~~~~---~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (267)
T 3t4x_A 148 IMPS---QEMAHYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPT 224 (267)
T ss_dssp TSCC---TTCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHCTT
T ss_pred ccCC---CcchHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccCCc
Confidence 8877 7889999999999999999999999999999999999999985311
Q ss_pred ---CCCCchhhHHHHHHHHhhhcccccccceeeeCCee
Q psy11190 212 ---NAPLEVGAATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 212 ---~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
....+|+|+++.+++++++.....+|+.+.+||..
T Consensus 225 ~~~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~ 262 (267)
T 3t4x_A 225 SIIQRLIRPEEIAHLVTFLSSPLSSAINGSALRIDGGL 262 (267)
T ss_dssp CSSCSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred ccccCccCHHHHHHHHHHHcCccccCccCCeEEECCCc
Confidence 12457999999999999998899999999999964
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-40 Score=272.34 Aligned_cols=226 Identities=18% Similarity=0.218 Sum_probs=193.2
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchh-HHHHHHHHhh-cCCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDK-AVELLALAQQ-HSNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~-~~~~~~~~~~-~~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
||++|||||++|||++++++|+++| ++|++++|+.+. .+.+.+.... ..++.++++|++|.++ ++++++++.+
T Consensus 7 ~k~vlVTGas~gIG~~~a~~l~~~G----~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-v~~~~~~~~~ 81 (264)
T 3i4f_A 7 VRHALITAGTKGLGKQVTEKLLAKG----YSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKED-LHKIVEEAMS 81 (264)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHHTT----CEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHH-HHHHHHHHHH
T ss_pred cCEEEEeCCCchhHHHHHHHHHHCC----CEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHH-HHHHHHHHHH
Confidence 6899999999999999999999999 899999777554 3344444332 4578999999999999 9999999999
Q ss_pred hhcCCCccEEEecccc--CCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecC
Q psy11190 79 VVKDQGLNVLVNNAGI--AAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSI 156 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~--~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~ 156 (248)
.++ ++|+||||||. ... .++.+.+.++|++.+++|+.+++++++.++|.|+++ +.++||++||.
T Consensus 82 ~~g--~id~lv~~Ag~~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-----------~~g~iv~iss~ 147 (264)
T 3i4f_A 82 HFG--KIDFLINNAGPYVFER-KKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQ-----------NFGRIINYGFQ 147 (264)
T ss_dssp HHS--CCCEEECCCCCCCCSC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----------TCEEEEEECCT
T ss_pred HhC--CCCEEEECCcccccCC-CccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhc-----------CCCeEEEEeec
Confidence 987 59999999994 333 667788999999999999999999999999999886 57899999987
Q ss_pred CCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC---------------CCchhhHH
Q psy11190 157 MGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA---------------PLEVGAAT 221 (248)
Q Consensus 157 ~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~---------------~~~~~~~~ 221 (248)
.... ..+.++...|+++|+++++|+++|+.|++++||+||+|+||+++|++.+... ..+|++++
T Consensus 148 ~~~~-~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~~~dva 226 (264)
T 3i4f_A 148 GADS-APGWIYRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATIQEARQLKEHNTPIGRSGTGEDIA 226 (264)
T ss_dssp TGGG-CCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCCHHHHHHC--------CCCCHHHHH
T ss_pred hhcc-cCCCCCCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhccHHHHHHHhhcCCCCCCcCHHHHH
Confidence 3321 1223667899999999999999999999999999999999999999865431 34799999
Q ss_pred HHHHHHhhhcccccccceeeeCCee
Q psy11190 222 AGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 222 ~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
+.++.++++.....+|+.+.++|..
T Consensus 227 ~~v~~l~s~~~~~itG~~i~vdGG~ 251 (264)
T 3i4f_A 227 RTISFLCEDDSDMITGTIIEVTGAV 251 (264)
T ss_dssp HHHHHHHSGGGTTCCSCEEEESCSC
T ss_pred HHHHHHcCcccCCCCCcEEEEcCce
Confidence 9999999988888999999999964
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-40 Score=271.65 Aligned_cols=222 Identities=15% Similarity=0.173 Sum_probs=196.0
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhc--C-CceeEEeeccCCchhhhhHHHHhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQH--S-NLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~--~-~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
|++|||||++|||++++++|+++| ++|++++|+.++++++.+..... + ++.++++|++|.++ ++.+++++.+
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-v~~~~~~~~~ 82 (260)
T 2z1n_A 8 KLAVVTAGSSGLGFASALELARNG----ARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGD-IDRLFEKARD 82 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHH-HHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHH-HHHHHHHHHH
Confidence 789999999999999999999999 89999999988877764433322 3 78899999999999 9999999998
Q ss_pred hhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 79 VVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
.++ +|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|.++ +.++||++||..+
T Consensus 83 ~~g---id~lv~~Ag~~~~-~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----------~~g~iv~isS~~~ 147 (260)
T 2z1n_A 83 LGG---ADILVYSTGGPRP-GRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEK-----------GWGRMVYIGSVTL 147 (260)
T ss_dssp TTC---CSEEEECCCCCCC-BCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHH-----------TCEEEEEECCGGG
T ss_pred hcC---CCEEEECCCCCCC-CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----------CCcEEEEECchhh
Confidence 776 9999999998654 677788999999999999999999999999999876 5789999999998
Q ss_pred cccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCC----------CCC---------------
Q psy11190 159 SIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGG----------SNA--------------- 213 (248)
Q Consensus 159 ~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~----------~~~--------------- 213 (248)
..+. ++...|+++|++++.|+++++.|++++||+||+|+||+++|++.. ...
T Consensus 148 ~~~~---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 224 (260)
T 2z1n_A 148 LRPW---QDLALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMG 224 (260)
T ss_dssp TSCC---TTBHHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC-----------------------CCTTS
T ss_pred cCCC---CCCchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHHhcCCCC
Confidence 8776 778899999999999999999999999999999999999999865 110
Q ss_pred -CCchhhHHHHHHHHhhhcccccccceeeeCCee
Q psy11190 214 -PLEVGAATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 214 -~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
..+|+++++.++.++++.....+|+.+.++|..
T Consensus 225 r~~~~~dva~~v~~l~s~~~~~~tG~~i~vdGG~ 258 (260)
T 2z1n_A 225 RVGKPEELASVVAFLASEKASFITGAVIPVDGGA 258 (260)
T ss_dssp SCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred CccCHHHHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence 237999999999999988888999999999863
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-39 Score=269.66 Aligned_cols=223 Identities=21% Similarity=0.234 Sum_probs=197.0
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHH-hh-cCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALA-QQ-HSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~-~~-~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|++|||||++|||++++++|+++| ++|++++|+.++++++.+.+ .. +.++.++++|++|.++ ++++++++.+.
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G----~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~ 82 (263)
T 3ai3_A 8 KVAVITGSSSGIGLAIAEGFAKEG----AHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEG-VDAVVESVRSS 82 (263)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHH-HHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCC----CEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHH-HHHHHHHHHHH
Confidence 789999999999999999999999 89999999988877764333 22 4578899999999999 99999999999
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
++ ++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|.++ +.++||++||..+.
T Consensus 83 ~g--~id~lv~~Ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----------~~g~iv~isS~~~~ 148 (263)
T 3ai3_A 83 FG--GADILVNNAGTGSN-ETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRAR-----------GGGAIIHNASICAV 148 (263)
T ss_dssp HS--SCSEEEECCCCCCC-CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----------TCEEEEEECCGGGT
T ss_pred cC--CCCEEEECCCCCCC-CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----------CCcEEEEECchhhc
Confidence 87 59999999998764 677888999999999999999999999999999875 57899999999988
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC------------------------C---
Q psy11190 160 IEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS------------------------N--- 212 (248)
Q Consensus 160 ~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~------------------------~--- 212 (248)
.+. ++...|+++|++++.|+++++.|++++||+||+|+||+++|++... .
T Consensus 149 ~~~---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 225 (263)
T 3ai3_A 149 QPL---WYEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIK 225 (263)
T ss_dssp SCC---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHHCTTC
T ss_pred CCC---CCcchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcCCCCC
Confidence 766 7788999999999999999999999999999999999999986321 1
Q ss_pred CCCchhhHHHHHHHHhhhcccccccceeeeCCee
Q psy11190 213 APLEVGAATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
...+|+++++.++.++++.....+|+.+.++|..
T Consensus 226 ~~~~~~dvA~~~~~l~s~~~~~~~G~~~~vdgG~ 259 (263)
T 3ai3_A 226 RFASPEELANFFVFLCSERATYSVGSAYFVDGGM 259 (263)
T ss_dssp SCBCHHHHHHHHHHHTSTTCTTCCSCEEEESTTC
T ss_pred CCcCHHHHHHHHHHHcCccccCCCCcEEEECCCc
Confidence 1358999999999999887778899999999863
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-39 Score=270.80 Aligned_cols=222 Identities=21% Similarity=0.228 Sum_probs=192.8
Q ss_pred ceEEEecCC--CchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCN--RGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas--~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|++|||||+ +|||+++|++|+++| ++|++++|+....+.+.++....+.+.++++|++|.++ ++.+++++.+.
T Consensus 15 k~vlITGa~~~~giG~~ia~~l~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-v~~~~~~~~~~ 89 (271)
T 3ek2_A 15 KRILLTGLLSNRSIAYGIAKACKREG----AELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQ-IDALFASLKTH 89 (271)
T ss_dssp CEEEECCCCSTTSHHHHHHHHHHHTT----CEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHH-HHHHHHHHHHH
T ss_pred CEEEEeCCCCCCcHHHHHHHHHHHcC----CCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHH-HHHHHHHHHHH
Confidence 799999999 999999999999999 89999999966555556665666678999999999999 99999999999
Q ss_pred hcCCCccEEEeccccCCcc---ccCCC-CChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeec
Q psy11190 80 VKDQGLNVLVNNAGIAAKF---TRLGL-LKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSS 155 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~---~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss 155 (248)
++ ++|+||||||+.... ..+.+ .+.++|++.+++|+.+++++++.++|.|.+ .++||++||
T Consensus 90 ~g--~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-------------~g~iv~isS 154 (271)
T 3ek2_A 90 WD--SLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSD-------------DASLLTLSY 154 (271)
T ss_dssp CS--CEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEE-------------EEEEEEEEC
T ss_pred cC--CCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhcc-------------CceEEEEec
Confidence 87 699999999987541 33444 899999999999999999999999999864 578999999
Q ss_pred CCCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC-----------------CCchh
Q psy11190 156 IMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA-----------------PLEVG 218 (248)
Q Consensus 156 ~~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~-----------------~~~~~ 218 (248)
.++..+. ++...|+++|+++++|+++++.|++++||+||+|+||+++|+|.+... ..+|+
T Consensus 155 ~~~~~~~---~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~pe 231 (271)
T 3ek2_A 155 LGAERAI---PNYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKSFGKILDFVESNSPLKRNVTIE 231 (271)
T ss_dssp GGGTSBC---TTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCHHHHHHHHHHHHHSTTSSCCCHH
T ss_pred cccccCC---CCccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcccchHHHHHHHHhcCCcCCCCCHH
Confidence 9998877 788999999999999999999999999999999999999999976531 46899
Q ss_pred hHHHHHHHHhhhcccccccceeeeCCee
Q psy11190 219 AATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
++++.+++++++.....+|+.+.+||..
T Consensus 232 dva~~i~~l~s~~~~~~tG~~i~vdgG~ 259 (271)
T 3ek2_A 232 QVGNAGAFLLSDLASGVTAEVMHVDSGF 259 (271)
T ss_dssp HHHHHHHHHHSGGGTTCCSEEEEESTTG
T ss_pred HHHHHHHHHcCcccCCeeeeEEEECCCe
Confidence 9999999999988889999999999863
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-39 Score=270.46 Aligned_cols=221 Identities=24% Similarity=0.288 Sum_probs=195.4
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||++|||++++++|+++| ++|++++|+.++++++.+.. +.++.++++|++|.++ ++++++++.+.++
T Consensus 6 k~vlVTGas~gIG~~ia~~l~~~G----~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~-~~~~~~~~~~~~g 78 (254)
T 1hdc_A 6 KTVIITGGARGLGAEAARQAVAAG----ARVVLADVLDEEGAATAREL--GDAARYQHLDVTIEED-WQRVVAYAREEFG 78 (254)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHTT--GGGEEEEECCTTCHHH-HHHHHHHHHHHHS
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHh--CCceeEEEecCCCHHH-HHHHHHHHHHHcC
Confidence 789999999999999999999999 89999999987776654333 3467889999999999 9999999999887
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|+++ +.++||++||..+..+
T Consensus 79 --~iD~lv~nAg~~~~-~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----------~~g~iv~isS~~~~~~ 144 (254)
T 1hdc_A 79 --SVDGLVNNAGISTG-MFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDA-----------GGGSIVNISSAAGLMG 144 (254)
T ss_dssp --CCCEEEECCCCCCC-SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----------TCEEEEEECCGGGTSC
T ss_pred --CCCEEEECCCCCCC-CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----------CCCEEEEECchhhccC
Confidence 59999999998754 667788999999999999999999999999999876 5789999999998877
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC------------C---CCC-chhhHHHHHH
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS------------N---APL-EVGAATAGII 225 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~------------~---~~~-~~~~~~~~~~ 225 (248)
. ++...|+++|++++.|+++++.|++++||+||+|+||+++|++.+. . ... +|+++++.++
T Consensus 145 ~---~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~~dvA~~v~ 221 (254)
T 1hdc_A 145 L---ALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEGNYPNTPMGRVGNEPGEIAGAVV 221 (254)
T ss_dssp C---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCCCSTTSCTTSTTSSCB-CHHHHHHHHH
T ss_pred C---CCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCccccccchhHHHHHHhcCCCCCCCCCHHHHHHHHH
Confidence 6 7788999999999999999999999999999999999999986321 0 124 8999999999
Q ss_pred HHhhhcccccccceeeeCCee
Q psy11190 226 QFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 226 ~~~~~~~~~~~g~~~~~~g~~ 246 (248)
.++++.....+|+.+.++|..
T Consensus 222 ~l~s~~~~~~tG~~~~vdgG~ 242 (254)
T 1hdc_A 222 KLLSDTSSYVTGAELAVDGGW 242 (254)
T ss_dssp HHHSGGGTTCCSCEEEESTTT
T ss_pred HHhCchhcCCCCCEEEECCCc
Confidence 999887788999999999863
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-39 Score=270.08 Aligned_cols=224 Identities=21% Similarity=0.288 Sum_probs=197.4
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHH-HHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELL-ALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|++|||||++|||++++++|+++| ++|++++|+.++++++. ++...+.++.++.+|++|.++ ++.+++++.+.+
T Consensus 15 k~vlVTGas~gIG~~ia~~l~~~G----~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~~ 89 (260)
T 2zat_A 15 KVALVTASTDGIGLAIARRLAQDG----AHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAED-RERLVAMAVNLH 89 (260)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH-HHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHH-HHHHHHHHHHHc
Confidence 789999999999999999999999 89999999988877664 333335578899999999999 999999999988
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+ ++|+||||||......++.+.+.++|++.+++|+.+++++++.++|.|.++ +.++||++||..+..
T Consensus 90 g--~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-----------~~g~iv~isS~~~~~ 156 (260)
T 2zat_A 90 G--GVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKR-----------GGGSVLIVSSVGAYH 156 (260)
T ss_dssp S--CCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----------TCEEEEEECCGGGTS
T ss_pred C--CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----------CCCEEEEEechhhcC
Confidence 7 599999999986433567778999999999999999999999999999875 578999999999887
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC-----------------CCCCchhhHHHH
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS-----------------NAPLEVGAATAG 223 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~-----------------~~~~~~~~~~~~ 223 (248)
+. ++...|+++|++++.|+++++.|++++||+||+|.||+++|++... ....+|+++++.
T Consensus 157 ~~---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~ 233 (260)
T 2zat_A 157 PF---PNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGI 233 (260)
T ss_dssp CC---TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHSSHHHHHHHHHHHTCSSCBCGGGGHHH
T ss_pred CC---CCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhcccChHHHHHHHhcCCCCCCCCHHHHHHH
Confidence 66 7788999999999999999999999999999999999999998532 114589999999
Q ss_pred HHHHhhhcccccccceeeeCCee
Q psy11190 224 IIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 224 ~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
++.++++.....+|+.+.++|..
T Consensus 234 v~~l~s~~~~~~tG~~~~vdgG~ 256 (260)
T 2zat_A 234 VSFLCSEDASYITGETVVVGGGT 256 (260)
T ss_dssp HHHHTSGGGTTCCSCEEEESTTC
T ss_pred HHHHcCcccCCccCCEEEECCCc
Confidence 99999887778899999999853
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-39 Score=273.87 Aligned_cols=220 Identities=24% Similarity=0.299 Sum_probs=190.4
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||++|||+++|++|+++| ++|++++|+.++++++.+.. ..++.++++|++|.++ ++++++++.+.++
T Consensus 6 k~~lVTGas~GIG~aia~~la~~G----~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~-v~~~~~~~~~~~g 78 (281)
T 3zv4_A 6 EVALITGGASGLGRALVDRFVAEG----ARVAVLDKSAERLRELEVAH--GGNAVGVVGDVRSLQD-QKRAAERCLAAFG 78 (281)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHT--BTTEEEEECCTTCHHH-HHHHHHHHHHHHS
T ss_pred CEEEEECCCcHHHHHHHHHHHHCc----CEEEEEeCCHHHHHHHHHHc--CCcEEEEEcCCCCHHH-HHHHHHHHHHhcC
Confidence 799999999999999999999999 89999999988877764433 5688999999999999 9999999999988
Q ss_pred CCCccEEEeccccCCccccC----CCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCC
Q psy11190 82 DQGLNVLVNNAGIAAKFTRL----GLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIM 157 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~ 157 (248)
++|+||||||+......+ .+.+.++|++.+++|+.++++++++++|.|.++ +|+||++||..
T Consensus 79 --~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~------------~g~iv~isS~~ 144 (281)
T 3zv4_A 79 --KIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSS------------RGSVVFTISNA 144 (281)
T ss_dssp --CCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------------TCEEEEECCGG
T ss_pred --CCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhc------------CCeEEEEecch
Confidence 699999999986432222 244556799999999999999999999999874 58999999999
Q ss_pred CcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC-------------------------
Q psy11190 158 GSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN------------------------- 212 (248)
Q Consensus 158 ~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~------------------------- 212 (248)
+..+. ++...|++||+++++|+++|+.|++++ ||||+|+||+++|+|....
T Consensus 145 ~~~~~---~~~~~Y~asKaa~~~l~~~la~e~~~~-Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 220 (281)
T 3zv4_A 145 GFYPN---GGGPLYTATKHAVVGLVRQMAFELAPH-VRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIG 220 (281)
T ss_dssp GTSSS---SSCHHHHHHHHHHHHHHHHHHHHHTTT-SEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHTCTTS
T ss_pred hccCC---CCCchhHHHHHHHHHHHHHHHHHhcCC-CEEEEEECCcCcCCcccccccccccccccchhHHHHHHhcCCCC
Confidence 98877 788899999999999999999999987 9999999999999986431
Q ss_pred CCCchhhHHHHHHHHhh-hcccccccceeeeCCee
Q psy11190 213 APLEVGAATAGIIQFIQ-SLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 213 ~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~g~~ 246 (248)
...+|+|+++.++++++ +.....+|+.+.+||..
T Consensus 221 r~~~pedvA~~v~fL~s~~~~~~itG~~i~vdGG~ 255 (281)
T 3zv4_A 221 RMPALEEYTGAYVFFATRGDSLPATGALLNYDGGM 255 (281)
T ss_dssp SCCCGGGGSHHHHHHHSTTTSTTCSSCEEEESSSG
T ss_pred CCCCHHHHHHHHHHhhcccccccccCcEEEECCCC
Confidence 13579999999999998 66677999999999964
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-39 Score=271.75 Aligned_cols=225 Identities=20% Similarity=0.275 Sum_probs=198.7
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEE-eecCchhHHHHH-HHHhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFA-TCRNKDKAVELL-ALAQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~-~~r~~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|++|||||++|||+++|++|+++| ++|++ ..|+.+.+++.. ++.....++.++++|++|.++ ++++++++.+.
T Consensus 27 k~vlVTGas~gIG~~la~~l~~~G----~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~-~~~~~~~~~~~ 101 (267)
T 4iiu_A 27 RSVLVTGASKGIGRAIARQLAADG----FNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQ-CREVLEHEIAQ 101 (267)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT----CEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH-HHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCC----CEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHH-HHHHHHHHHHH
Confidence 789999999999999999999999 78866 567777766663 444456689999999999999 99999999998
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
++ ++|+||||||.... .++.+.+.++|++.+++|+.+++++++.+++.|.++. +.++||++||.++.
T Consensus 102 ~g--~id~li~nAg~~~~-~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~----------~~g~iv~isS~~~~ 168 (267)
T 4iiu_A 102 HG--AWYGVVSNAGIARD-AAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGAR----------QGGRIITLSSVSGV 168 (267)
T ss_dssp HC--CCSEEEECCCCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT----------SCEEEEEECCHHHH
T ss_pred hC--CccEEEECCCCCCC-CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC----------CCcEEEEEcchHhc
Confidence 87 59999999998875 7777889999999999999999999999999887432 57899999999998
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC--------------CCchhhHHHHHH
Q psy11190 160 IEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA--------------PLEVGAATAGII 225 (248)
Q Consensus 160 ~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~--------------~~~~~~~~~~~~ 225 (248)
.+. +++..|+++|+++++|+++++.|++++||+|++|+||+++|++..... ..+|+++++.++
T Consensus 169 ~~~---~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~p~~~~~~~edva~~~~ 245 (267)
T 4iiu_A 169 MGN---RGQVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEMEESALKEAMSMIPMKRMGQAEEVAGLAS 245 (267)
T ss_dssp HCC---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCCHHHHHHHHHTCTTCSCBCHHHHHHHHH
T ss_pred cCC---CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCcccccHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence 877 788999999999999999999999999999999999999999975421 458999999999
Q ss_pred HHhhhcccccccceeeeCCeec
Q psy11190 226 QFIQSLGEAHNGGFFEYTGKAI 247 (248)
Q Consensus 226 ~~~~~~~~~~~g~~~~~~g~~~ 247 (248)
+++++.....+|+.+.+||..+
T Consensus 246 ~L~s~~~~~itG~~i~vdGG~~ 267 (267)
T 4iiu_A 246 YLMSDIAGYVTRQVISINGGML 267 (267)
T ss_dssp HHHSGGGTTCCSCEEEESTTCC
T ss_pred HHhCCcccCccCCEEEeCCCcC
Confidence 9999988899999999999753
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-39 Score=272.20 Aligned_cols=214 Identities=23% Similarity=0.297 Sum_probs=191.3
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
.|++|||||++|||+++|++|+++| ++|++++|+.+.. ...+..+++|++|.++ ++++++++.+.+
T Consensus 14 ~k~vlVTGas~GIG~aia~~l~~~G----~~V~~~~r~~~~~---------~~~~~~~~~Dv~~~~~-v~~~~~~~~~~~ 79 (269)
T 3vtz_A 14 DKVAIVTGGSSGIGLAVVDALVRYG----AKVVSVSLDEKSD---------VNVSDHFKIDVTNEEE-VKEAVEKTTKKY 79 (269)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTT----CEEEEEESCC--C---------TTSSEEEECCTTCHHH-HHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCC----CEEEEEeCCchhc---------cCceeEEEecCCCHHH-HHHHHHHHHHHc
Confidence 3799999999999999999999999 8999999987653 2356789999999999 999999999998
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+ ++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|.++ +.|+||++||..+..
T Consensus 80 g--~iD~lv~nAg~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-----------~~g~iv~isS~~~~~ 145 (269)
T 3vtz_A 80 G--RIDILVNNAGIEQY-SPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAI-----------GHGSIINIASVQSYA 145 (269)
T ss_dssp S--CCCEEEECCCCCCC-CCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----------TCEEEEEECCGGGTS
T ss_pred C--CCCEEEECCCcCCC-CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----------CCCEEEEECchhhcc
Confidence 8 69999999998765 777888999999999999999999999999999886 579999999999988
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC--------------------------CCC
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS--------------------------NAP 214 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~--------------------------~~~ 214 (248)
+. ++...|+++|+++++|+++++.|+++ ||+||+|+||+++|+|... ...
T Consensus 146 ~~---~~~~~Y~asKaa~~~l~~~la~e~~~-~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~ 221 (269)
T 3vtz_A 146 AT---KNAAAYVTSKHALLGLTRSVAIDYAP-KIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRI 221 (269)
T ss_dssp BC---TTCHHHHHHHHHHHHHHHHHHHHHTT-TEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHSTTSSC
T ss_pred CC---CCChhHHHHHHHHHHHHHHHHHHhcC-CCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcCCCCCC
Confidence 77 78899999999999999999999998 8999999999999987421 113
Q ss_pred CchhhHHHHHHHHhhhcccccccceeeeCCee
Q psy11190 215 LEVGAATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
.+|+++++.+++++++.....+|+.+.+||..
T Consensus 222 ~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~ 253 (269)
T 3vtz_A 222 GRPEEVAEVVAFLASDRSSFITGACLTVDGGL 253 (269)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred cCHHHHHHHHHHHhCCccCCCcCcEEEECCCc
Confidence 47999999999999998889999999999964
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-39 Score=269.54 Aligned_cols=222 Identities=24% Similarity=0.323 Sum_probs=196.0
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHH-HHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|++|||||++|||++++++|+++| ++|++++|+.++++++.+ +...+.++.++++|++|.++ ++.+++++.+.+
T Consensus 10 k~vlVTGas~giG~~ia~~l~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~~ 84 (260)
T 2ae2_A 10 CTALVTGGSRGIGYGIVEELASLG----ASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSE-RQELMNTVANHF 84 (260)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHH-HHHHHHHHHHHT
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHH-HHHHHHHHHHHc
Confidence 789999999999999999999999 899999999888777643 33334578899999999999 999999999988
Q ss_pred -cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 81 -KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 81 -~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
+ ++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|.++ +.++||++||..+.
T Consensus 85 ~g--~id~lv~~Ag~~~~-~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----------~~g~iv~isS~~~~ 150 (260)
T 2ae2_A 85 HG--KLNILVNNAGIVIY-KEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKAS-----------ERGNVVFISSVSGA 150 (260)
T ss_dssp TT--CCCEEEECCCCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----------SSEEEEEECCGGGT
T ss_pred CC--CCCEEEECCCCCCC-CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----------CCcEEEEEcchhhc
Confidence 5 59999999998754 667788999999999999999999999999999875 57899999999988
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC--------------------CCCCchhh
Q psy11190 160 IEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS--------------------NAPLEVGA 219 (248)
Q Consensus 160 ~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~--------------------~~~~~~~~ 219 (248)
.+. ++...|+++|++++.|+++++.|++++||+||+|+||+++|++... ....+|++
T Consensus 151 ~~~---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 227 (260)
T 2ae2_A 151 LAV---PYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKE 227 (260)
T ss_dssp SCC---TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHHH
T ss_pred cCC---CCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHhcCCCCCCCCHHH
Confidence 766 7788999999999999999999999999999999999999986321 11357999
Q ss_pred HHHHHHHHhhhcccccccceeeeCCe
Q psy11190 220 ATAGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 220 ~~~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
+++.++.++++.....+|+.+.++|.
T Consensus 228 vA~~v~~l~s~~~~~~tG~~~~vdgG 253 (260)
T 2ae2_A 228 LAAMVAFLCFPAASYVTGQIIYVDGG 253 (260)
T ss_dssp HHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHHHHHcCccccCCCCCEEEECCC
Confidence 99999999988778899999999986
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-39 Score=267.88 Aligned_cols=219 Identities=22% Similarity=0.305 Sum_probs=186.8
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||++|||++++++|+++| ++|++++|+.++++++.+.. ..++.++++|++|.++ ++.+++++.+.++
T Consensus 1 k~vlVTGas~gIG~aia~~l~~~G----~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~-v~~~~~~~~~~~g 73 (248)
T 3asu_A 1 MIVLVTGATAGFGECITRRFIQQG----HKVIATGRRQERLQELKDEL--GDNLYIAQLDVRNRAA-IEEMLASLPAEWC 73 (248)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHH--CTTEEEEECCTTCHHH-HHHHHHTSCTTTC
T ss_pred CEEEEECCCChHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHh--cCceEEEEcCCCCHHH-HHHHHHHHHHhCC
Confidence 689999999999999999999999 89999999988777664443 3578899999999999 9999999988887
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+||||||......++.+.+.++|++.+++|+.+++++++.++|.|.++ +.++||++||..+..+
T Consensus 74 --~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-----------~~g~iv~isS~~~~~~ 140 (248)
T 3asu_A 74 --NIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVER-----------NHGHIINIGSTAGSWP 140 (248)
T ss_dssp --CCCEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----------TCCEEEEECCGGGTSC
T ss_pred --CCCEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----------CCceEEEEccchhccC
Confidence 599999999986423567788999999999999999999999999999875 5799999999998877
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCccee-cCCCCC---------------CCCCchhhHHHHHH
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVK-TDMGGS---------------NAPLEVGAATAGII 225 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~-t~~~~~---------------~~~~~~~~~~~~~~ 225 (248)
. ++...|+++|+++++|+++++.|++++||+||+|+||+++ |+|... ..+.+|+++++.++
T Consensus 141 ~---~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~v~ 217 (248)
T 3asu_A 141 Y---AGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAVW 217 (248)
T ss_dssp C---TTCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC----------------------CCBCHHHHHHHHH
T ss_pred C---CCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcchhhcccCchHHHHHHHhccCCCCHHHHHHHHH
Confidence 6 7788999999999999999999999999999999999999 998531 12468999999999
Q ss_pred HHhhhcccccccceeeeCC
Q psy11190 226 QFIQSLGEAHNGGFFEYTG 244 (248)
Q Consensus 226 ~~~~~~~~~~~g~~~~~~g 244 (248)
+++++ ....+|+.+..++
T Consensus 218 ~l~s~-~~~~~g~~i~v~~ 235 (248)
T 3asu_A 218 WVSTL-PAHVNINTLEMMP 235 (248)
T ss_dssp HHHHS-CTTCCCCEEEECC
T ss_pred HHhcC-CccceeeEEEEcc
Confidence 99986 4567777776554
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-39 Score=275.69 Aligned_cols=228 Identities=21% Similarity=0.201 Sum_probs=196.0
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEee-cCchhHHHHHHHHh--hcCCceeEEeeccCCc------------
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATC-RNKDKAVELLALAQ--QHSNLHVIELDVTDFS------------ 66 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~-r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------ 66 (248)
|++|||||++|||+++|++|+++| ++|++++ |+.++++++.+.+. .+.++.++++|++|.+
T Consensus 47 k~~lVTGas~GIG~aia~~La~~G----~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~ 122 (328)
T 2qhx_A 47 PVALVTGAAKRLGRSIAEGLHAEG----YAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAP 122 (328)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTT----CEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC----CEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhccccccccccc
Confidence 689999999999999999999999 8999999 99888777744332 3457899999999999
Q ss_pred -----hhhhhHHHHhhhhhcCCCccEEEeccccCCccccCCCCC--------------hhhhhheeeecchhhHHHHHHH
Q psy11190 67 -----KQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLK--------------PEQMTDHFLVNVTAPLMLTKTM 127 (248)
Q Consensus 67 -----~~v~~~~~~i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~--------------~~~~~~~~~~n~~~~~~l~~~~ 127 (248)
+ ++.+++++.+.++ ++|+||||||+... .++.+.+ .++|++.+++|+.+++++++.+
T Consensus 123 ~~~~~~-v~~~~~~~~~~~g--~iD~lVnnAG~~~~-~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~ 198 (328)
T 2qhx_A 123 VTLFTR-CAELVAACYTHWG--RCDVLVNNASSFYP-TPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAF 198 (328)
T ss_dssp BCHHHH-HHHHHHHHHHHHS--CCCEEEECCCCCCC-CCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred cccHHH-HHHHHHHHHHhcC--CCCEEEECCCCCCC-CChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHH
Confidence 8 9999999999887 59999999998765 6677777 8999999999999999999999
Q ss_pred hHHHHhhhhcccCCCCCCCCceEEEeecCCCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecC
Q psy11190 128 LPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTD 207 (248)
Q Consensus 128 ~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~ 207 (248)
+|.|.+++.... ...++||++||..+..+. ++...|+++|++++.|++.|+.|++++||+||+|+||+++|+
T Consensus 199 ~~~m~~~~~~~~-----~~~g~IV~isS~~~~~~~---~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~ 270 (328)
T 2qhx_A 199 AHRVAGTPAKHR-----GTNYSIINMVDAMTNQPL---LGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLV 270 (328)
T ss_dssp HHHHHHSCGGGS-----CSCEEEEEECCTTTTSCC---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC
T ss_pred HHHHHhcCCcCC-----CCCcEEEEECchhhccCC---CCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCC
Confidence 999987510000 016899999999998776 788899999999999999999999999999999999999999
Q ss_pred CCCCC---------------CCCchhhHHHHHHHHhhhcccccccceeeeCCee
Q psy11190 208 MGGSN---------------APLEVGAATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 208 ~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
+ ... ...+|+++++.+++++++.....+|+++.+||..
T Consensus 271 ~-~~~~~~~~~~~~~~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~ 323 (328)
T 2qhx_A 271 D-DMPPAVWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGY 323 (328)
T ss_dssp C-CSCHHHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred c-cccHHHHHHHHhhCCCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCCc
Confidence 8 321 2357999999999999988888999999999863
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-39 Score=268.81 Aligned_cols=222 Identities=15% Similarity=0.205 Sum_probs=196.8
Q ss_pred ceEEEecCC--CchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcC--CceeEEeeccCCchhhhhHHHHhh
Q psy11190 2 KSILITGCN--RGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHS--NLHVIELDVTDFSKQQDVLFKDIS 77 (248)
Q Consensus 2 k~~lVtGas--~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~v~~~~~~i~ 77 (248)
|++|||||+ +|||+++|++|+++| ++|++++|+.+..+.+.++....+ ++.++++|++|.++ ++++++++.
T Consensus 8 k~vlVTGasg~~GIG~~ia~~l~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-v~~~~~~~~ 82 (266)
T 3oig_A 8 RNIVVMGVANKRSIAWGIARSLHEAG----ARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAE-IETCFASIK 82 (266)
T ss_dssp CEEEEECCCSTTSHHHHHHHHHHHTT----CEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHH-HHHHHHHHH
T ss_pred CEEEEEcCCCCCcHHHHHHHHHHHCC----CEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHH-HHHHHHHHH
Confidence 789999999 679999999999999 899999999766665555544322 68999999999999 999999999
Q ss_pred hhhcCCCccEEEeccccCCc---cccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEee
Q psy11190 78 DVVKDQGLNVLVNNAGIAAK---FTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVS 154 (248)
Q Consensus 78 ~~~~~~~iD~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vs 154 (248)
+.++ ++|+||||||...+ ...+.+.+.++|++.+++|+.+++++++.++|.|++ .|+||++|
T Consensus 83 ~~~g--~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-------------~g~iv~is 147 (266)
T 3oig_A 83 EQVG--VIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTE-------------GGSIVTLT 147 (266)
T ss_dssp HHHS--CCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT-------------CEEEEEEE
T ss_pred HHhC--CeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCC-------------CceEEEEe
Confidence 9988 59999999998752 256677899999999999999999999999999863 58999999
Q ss_pred cCCCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC-----------------CCch
Q psy11190 155 SIMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA-----------------PLEV 217 (248)
Q Consensus 155 s~~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~-----------------~~~~ 217 (248)
|.++..+. ++...|+++|+++++|+++|+.|++++||+||+|+||+++|++.+... ..+|
T Consensus 148 S~~~~~~~---~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p 224 (266)
T 3oig_A 148 YLGGELVM---PNYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISDFNSILKDIEERAPLRRTTTP 224 (266)
T ss_dssp CGGGTSCC---TTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSSCCCH
T ss_pred cccccccC---CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccchHHHHHHHHhcCCCCCCCCH
Confidence 99998877 788999999999999999999999999999999999999999876532 3589
Q ss_pred hhHHHHHHHHhhhcccccccceeeeCCee
Q psy11190 218 GAATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
+++++.++.++++.....+|+.+.+||..
T Consensus 225 ~dva~~v~~l~s~~~~~~tG~~i~vdGG~ 253 (266)
T 3oig_A 225 EEVGDTAAFLFSDMSRGITGENLHVDSGF 253 (266)
T ss_dssp HHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHHHHHHHcCCchhcCcCCEEEECCCe
Confidence 99999999999988888999999999864
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-39 Score=268.03 Aligned_cols=220 Identities=25% Similarity=0.323 Sum_probs=195.4
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||++|||++++++|+++| ++|++++|+.++++++.+... ..+.++++|++|.++ ++++++++.+.++
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G----~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~-v~~~~~~~~~~~g 80 (260)
T 1nff_A 8 KVALVSGGARGMGASHVRAMVAEG----AKVVFGDILDEEGKAMAAELA--DAARYVHLDVTQPAQ-WKAAVDTAVTAFG 80 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHTG--GGEEEEECCTTCHHH-HHHHHHHHHHHHS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHhh--cCceEEEecCCCHHH-HHHHHHHHHHHcC
Confidence 689999999999999999999999 899999999887776644332 247889999999999 9999999999987
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|+++ +.++||++||..+..+
T Consensus 81 --~iD~lv~~Ag~~~~-~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----------~~g~iv~isS~~~~~~ 146 (260)
T 1nff_A 81 --GLHVLVNNAGILNI-GTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEA-----------GRGSIINISSIEGLAG 146 (260)
T ss_dssp --CCCEEEECCCCCCC-BCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----------TCEEEEEECCGGGTSC
T ss_pred --CCCEEEECCCCCCC-CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----------CCCEEEEEeehhhcCC
Confidence 59999999998764 677888999999999999999999999999999876 5789999999998877
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC----------CCCCchhhHHHHHHHHhhhc
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS----------NAPLEVGAATAGIIQFIQSL 231 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~----------~~~~~~~~~~~~~~~~~~~~ 231 (248)
. ++...|+++|++++.|+++++.|++++||+||+|+||+++|++... ....+|+++++.++.++++.
T Consensus 147 ~---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~~ 223 (260)
T 1nff_A 147 T---VACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPEDIFQTALGRAAEPVEVSNLVVYLASDE 223 (260)
T ss_dssp C---TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCTTCSCCSSSSCBCHHHHHHHHHHHHSGG
T ss_pred C---CCchhHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccccchhhHHhCccCCCCCHHHHHHHHHHHhCcc
Confidence 6 7788999999999999999999999999999999999999998541 01357999999999999887
Q ss_pred ccccccceeeeCCe
Q psy11190 232 GEAHNGGFFEYTGK 245 (248)
Q Consensus 232 ~~~~~g~~~~~~g~ 245 (248)
....+|+.+.++|.
T Consensus 224 ~~~~~G~~~~v~gG 237 (260)
T 1nff_A 224 SSYSTGAEFVVDGG 237 (260)
T ss_dssp GTTCCSCEEEESTT
T ss_pred ccCCcCCEEEECCC
Confidence 77889999999886
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-39 Score=279.15 Aligned_cols=228 Identities=18% Similarity=0.250 Sum_probs=199.4
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecC----------chhHHHHH-HHHhhcCCceeEEeeccCCchhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRN----------KDKAVELL-ALAQQHSNLHVIELDVTDFSKQQD 70 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~----------~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~~v~ 70 (248)
|++|||||++|||+++|++|+++| ++|++++|+ .+.++++. ++...+.++.++++|++|.++ ++
T Consensus 28 k~vlVTGas~GIG~aia~~la~~G----~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~-v~ 102 (322)
T 3qlj_A 28 RVVIVTGAGGGIGRAHALAFAAEG----ARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQ-AA 102 (322)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT----CEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHH-HH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC----CEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHH-HH
Confidence 789999999999999999999999 999999998 56666664 344445678899999999999 99
Q ss_pred hHHHHhhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceE
Q psy11190 71 VLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAI 150 (248)
Q Consensus 71 ~~~~~i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~i 150 (248)
++++++.+.++ ++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|.+...... ...|+|
T Consensus 103 ~~~~~~~~~~g--~iD~lv~nAg~~~~-~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~-----~~~g~I 174 (322)
T 3qlj_A 103 GLIQTAVETFG--GLDVLVNNAGIVRD-RMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGK-----AVDGRI 174 (322)
T ss_dssp HHHHHHHHHHS--CCCEEECCCCCCCC-CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-----CCCEEE
T ss_pred HHHHHHHHHcC--CCCEEEECCCCCCC-CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCC-----CCCcEE
Confidence 99999999998 59999999998875 67888999999999999999999999999999987532110 124899
Q ss_pred EEeecCCCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC------------CCchh
Q psy11190 151 VNVSSIMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA------------PLEVG 218 (248)
Q Consensus 151 v~vss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~------------~~~~~ 218 (248)
|++||..+..+. ++...|+++|+++++|+++++.|++++||+||+|+|| ++|+|..... ..+|+
T Consensus 175 V~isS~~~~~~~---~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~~~~~~~~~~~~~~pe 250 (322)
T 3qlj_A 175 INTSSGAGLQGS---VGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAEMMATQDQDFDAMAPE 250 (322)
T ss_dssp EEECCHHHHHCB---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC--------CCTTCGG
T ss_pred EEEcCHHHccCC---CCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhhhhhccccccCCCCHH
Confidence 999999998877 7888999999999999999999999999999999999 9999875532 35799
Q ss_pred hHHHHHHHHhhhcccccccceeeeCCee
Q psy11190 219 AATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
++++.+++++++.....+|+++.+||..
T Consensus 251 dva~~v~~L~s~~~~~itG~~i~vdGG~ 278 (322)
T 3qlj_A 251 NVSPLVVWLGSAEARDVTGKVFEVEGGK 278 (322)
T ss_dssp GTHHHHHHHTSGGGGGCCSCEEEEETTE
T ss_pred HHHHHHHHHhCccccCCCCCEEEECCCc
Confidence 9999999999998889999999999864
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-39 Score=271.81 Aligned_cols=228 Identities=23% Similarity=0.338 Sum_probs=192.6
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEe-ecCchhHHHHHH-HHhhcCCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFAT-CRNKDKAVELLA-LAQQHSNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~-~r~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
+|++|||||++|||+++|++|+++| ++|++. .|+.+.++++.+ +.....++.++++|++|.++ ++.+++++.+
T Consensus 26 ~k~vlITGas~gIG~a~a~~l~~~G----~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-v~~~~~~~~~ 100 (272)
T 4e3z_A 26 TPVVLVTGGSRGIGAAVCRLAARQG----WRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAAD-IAAMFSAVDR 100 (272)
T ss_dssp SCEEEETTTTSHHHHHHHHHHHHTT----CEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHH-HHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC----CEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHH-HHHHHHHHHH
Confidence 4789999999999999999999999 888776 788777777744 33345678999999999999 9999999999
Q ss_pred hhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 79 VVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
.++ ++|+||||||......++.+.+.++|++.+++|+.+++++++.++|.|.+... ...++||++||.++
T Consensus 101 ~~g--~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~--------~~~g~iv~isS~~~ 170 (272)
T 4e3z_A 101 QFG--RLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYS--------GQGGAIVNVSSMAA 170 (272)
T ss_dssp HHS--CCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGT--------CCCEEEEEECCTHH
T ss_pred hCC--CCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhcc--------CCCCEEEEEcchHh
Confidence 988 59999999998765467788899999999999999999999999999976421 14689999999998
Q ss_pred cccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC----------------CCchhhHHH
Q psy11190 159 SIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA----------------PLEVGAATA 222 (248)
Q Consensus 159 ~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~----------------~~~~~~~~~ 222 (248)
..+.. +++..|+++|+++++|+++++.|++++||+|++|+||+++|++..... ..+|+++++
T Consensus 171 ~~~~~--~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~ 248 (272)
T 4e3z_A 171 ILGSA--TQYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGGLPDRAREMAPSVPMQRAGMPEEVAD 248 (272)
T ss_dssp HHCCT--TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC------------------CCTTSSCBCHHHHHH
T ss_pred ccCCC--CCcchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccCChHHHHHHhhcCCcCCCcCHHHHHH
Confidence 87651 356789999999999999999999999999999999999999864311 245999999
Q ss_pred HHHHHhhhcccccccceeeeCCe
Q psy11190 223 GIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 223 ~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
.++.++++.....+|+++.++|.
T Consensus 249 ~i~~l~s~~~~~~tG~~i~vdgG 271 (272)
T 4e3z_A 249 AILYLLSPSASYVTGSILNVSGG 271 (272)
T ss_dssp HHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHHhCCccccccCCEEeecCC
Confidence 99999998888899999999985
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-39 Score=270.47 Aligned_cols=222 Identities=21% Similarity=0.286 Sum_probs=189.0
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||++|||++++++|+++| ++|++++|+.++++++.+......++.++++|++|.++ ++.+++.+.+.++
T Consensus 22 k~vlVTGas~gIG~aia~~La~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~-v~~~~~~~~~~~g 96 (272)
T 2nwq_A 22 STLFITGATSGFGEACARRFAEAG----WSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAA-MSAAVDNLPEEFA 96 (272)
T ss_dssp CEEEESSTTTSSHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHH-HHHHHHTCCGGGS
T ss_pred cEEEEeCCCCHHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHH-HHHHHHHHHHHhC
Confidence 689999999999999999999999 89999999988877775444333578899999999999 9999999998887
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCc-eEEEeecCCCcc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRA-AIVNVSSIMGSI 160 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~-~iv~vss~~~~~ 160 (248)
++|+||||||......++.+.+.++|++.+++|+.+++++++.++|.|.++ +.| +||++||..+..
T Consensus 97 --~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~-----------~~g~~IV~isS~~~~~ 163 (272)
T 2nwq_A 97 --TLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAH-----------GAGASIVNLGSVAGKW 163 (272)
T ss_dssp --SCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----------CTTCEEEEECCGGGTS
T ss_pred --CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----------CCCcEEEEeCCchhcc
Confidence 599999999986533567788999999999999999999999999999876 467 999999999887
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC---------------CCCCchhhHHHHHH
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS---------------NAPLEVGAATAGII 225 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~---------------~~~~~~~~~~~~~~ 225 (248)
+. ++...|+++|+++++|+++++.|++++||+||+|+||+++|+|... ..+.+|+++++.++
T Consensus 164 ~~---~~~~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~ 240 (272)
T 2nwq_A 164 PY---PGSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFGGDQARYDKTYAGAHPIQPEDIAETIF 240 (272)
T ss_dssp CC---TTCHHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC--------------------CCCCBCHHHHHHHHH
T ss_pred CC---CCCchHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhcccccchHHHHHhhccCCCCCHHHHHHHHH
Confidence 76 7788999999999999999999999999999999999999998532 11468999999999
Q ss_pred HHhhhcccccccceeeeCCe
Q psy11190 226 QFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 226 ~~~~~~~~~~~g~~~~~~g~ 245 (248)
+++++ ....+|+.+..++.
T Consensus 241 ~l~s~-~~~~~g~~i~v~~~ 259 (272)
T 2nwq_A 241 WIMNQ-PAHLNINSLEIMPV 259 (272)
T ss_dssp HHHTS-CTTEEEEEEEEEET
T ss_pred HHhCC-CccCccceEEEeec
Confidence 99986 45677777766543
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-39 Score=271.92 Aligned_cols=227 Identities=21% Similarity=0.221 Sum_probs=191.7
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCc-hhHHHHHHHH--hhcCCceeEEeeccC----CchhhhhHHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNK-DKAVELLALA--QQHSNLHVIELDVTD----FSKQQDVLFK 74 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~-~~~~~~~~~~--~~~~~~~~~~~D~~~----~~~~v~~~~~ 74 (248)
|++|||||++|||+++|++|+++| ++|++++|+. ++++++.+.+ ..+.++.++++|++| .++ ++.+++
T Consensus 24 k~~lVTGas~gIG~aia~~L~~~G----~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~-v~~~~~ 98 (288)
T 2x9g_A 24 PAAVVTGAAKRIGRAIAVKLHQTG----YRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPAS-CEEIIN 98 (288)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHHT----CEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHH-HHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC----CeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHH-HHHHHH
Confidence 789999999999999999999999 8999999998 7777664433 234578899999999 888 999999
Q ss_pred HhhhhhcCCCccEEEeccccCCccccC-----CC-----CChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCC
Q psy11190 75 DISDVVKDQGLNVLVNNAGIAAKFTRL-----GL-----LKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLG 144 (248)
Q Consensus 75 ~i~~~~~~~~iD~lv~~ag~~~~~~~~-----~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~ 144 (248)
++.+.++ ++|+||||||.... .++ .+ .+.++|++.+++|+.+++++++.++|.|.+++... .
T Consensus 99 ~~~~~~g--~iD~lvnnAG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~-----~ 170 (288)
T 2x9g_A 99 SCFRAFG--RCDVLVNNASAFYP-TPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNC-----T 170 (288)
T ss_dssp HHHHHHS--CCCEEEECCCCCCC-CCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC-------------
T ss_pred HHHHhcC--CCCEEEECCCCCCC-CccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCC-----C
Confidence 9999887 59999999998754 455 55 78899999999999999999999999998742000 0
Q ss_pred CCCceEEEeecCCCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC-------------
Q psy11190 145 SSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS------------- 211 (248)
Q Consensus 145 ~~~~~iv~vss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~------------- 211 (248)
...++||++||..+..+. +++..|+++|+++++|+++|+.|++++||+||+|+||+++|++ ..
T Consensus 171 ~~~g~iv~isS~~~~~~~---~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~~~~~~~~~~~~~~p 246 (288)
T 2x9g_A 171 SSNLSIVNLCDAMVDQPC---MAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-AMGEEEKDKWRRKVP 246 (288)
T ss_dssp CCCEEEEEECCTTTTSCC---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-TSCHHHHHHHHHTCT
T ss_pred CCCeEEEEEecccccCCC---CCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-ccChHHHHHHHhhCC
Confidence 016899999999998776 7888999999999999999999999999999999999999998 21
Q ss_pred C-CC-CchhhHHHHHHHHhhhcccccccceeeeCCe
Q psy11190 212 N-AP-LEVGAATAGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 212 ~-~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
. .. .+|+++++.+++++++.....+|+++.++|.
T Consensus 247 ~~r~~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG 282 (288)
T 2x9g_A 247 LGRREASAEQIADAVIFLVSGSAQYITGSIIKVDGG 282 (288)
T ss_dssp TTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CCCCCCCHHHHHHHHHHHhCccccCccCCEEEECcc
Confidence 1 12 6899999999999998888999999999986
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-39 Score=263.89 Aligned_cols=219 Identities=17% Similarity=0.149 Sum_probs=190.1
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEe-e--cCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFAT-C--RNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDIS 77 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~-~--r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~ 77 (248)
||++|||||++|||++++++|+++| ++|+++ + |+.++++++.+.. . ..|+.|.++ ++.+++++.
T Consensus 1 ~k~vlVTGas~gIG~~ia~~l~~~G----~~V~~~~~~~r~~~~~~~~~~~~-~-------~~~~~~~~~-v~~~~~~~~ 67 (244)
T 1zmo_A 1 MVIALVTHARHFAGPAAVEALTQDG----YTVVCHDASFADAAERQRFESEN-P-------GTIALAEQK-PERLVDATL 67 (244)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTT----CEEEECCGGGGSHHHHHHHHHHS-T-------TEEECCCCC-GGGHHHHHG
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC----CEEEEecCCcCCHHHHHHHHHHh-C-------CCcccCHHH-HHHHHHHHH
Confidence 6899999999999999999999999 899999 6 9988776664332 1 134557788 999999999
Q ss_pred hhhcCCCccEEEeccccCCcc--ccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeec
Q psy11190 78 DVVKDQGLNVLVNNAGIAAKF--TRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSS 155 (248)
Q Consensus 78 ~~~~~~~iD~lv~~ag~~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss 155 (248)
+.++ ++|+||||||..... .++.+.+.++|++.+++|+.+++++++.++|.|.++ +.++||++||
T Consensus 68 ~~~g--~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-----------~~g~iv~isS 134 (244)
T 1zmo_A 68 QHGE--AIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAA-----------GGASVIFITS 134 (244)
T ss_dssp GGSS--CEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----------TCEEEEEECC
T ss_pred HHcC--CCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----------CCcEEEEECC
Confidence 9887 599999999986532 567788999999999999999999999999999875 5799999999
Q ss_pred CCCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCC---CC--------------C---CCC
Q psy11190 156 IMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMG---GS--------------N---APL 215 (248)
Q Consensus 156 ~~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~---~~--------------~---~~~ 215 (248)
..+..+. ++...|+++|+++++|+++++.|++++||+||+|+||+++|+|. .. . ...
T Consensus 135 ~~~~~~~---~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p~~r~~ 211 (244)
T 1zmo_A 135 SVGKKPL---AYNPLYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWENNPELRERVDRDVPLGRLG 211 (244)
T ss_dssp GGGTSCC---TTCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHHHHCHHHHHHHHHHCTTCSCB
T ss_pred hhhCCCC---CCchHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccccccccchHHHHHHHhcCCCCCCCc
Confidence 9998776 77889999999999999999999999999999999999999997 21 1 135
Q ss_pred chhhHHHHHHHHhhhcccccccceeeeCCeecC
Q psy11190 216 EVGAATAGIIQFIQSLGEAHNGGFFEYTGKAIK 248 (248)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~ 248 (248)
+|+++++.+++++++.....+|+++.+||...|
T Consensus 212 ~pe~vA~~v~~l~s~~~~~~tG~~i~vdgG~~p 244 (244)
T 1zmo_A 212 RPDEMGALITFLASRRAAPIVGQFFAFTGGYLP 244 (244)
T ss_dssp CHHHHHHHHHHHHTTTTGGGTTCEEEESTTCCC
T ss_pred CHHHHHHHHHHHcCccccCccCCEEEeCCCCCC
Confidence 899999999999998888899999999998654
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-39 Score=269.67 Aligned_cols=224 Identities=24% Similarity=0.286 Sum_probs=197.8
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHH-HHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|++|||||++|||++++++|+++| ++|++++|+.++++++.+ +...+.++.++++|++|.++ ++.+++++.+.+
T Consensus 23 k~vlVTGas~gIG~~ia~~l~~~G----~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~-v~~~~~~~~~~~ 97 (277)
T 2rhc_B 23 EVALVTGATSGIGLEIARRLGKEG----LRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPE-IEALVAAVVERY 97 (277)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH-HHHHHHHHHHHT
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHH-HHHHHHHHHHHh
Confidence 789999999999999999999999 899999999888777643 33335578899999999999 999999999988
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHH--HHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPL--LKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
+ ++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|. |.++ +.++||++||..+
T Consensus 98 g--~iD~lv~~Ag~~~~-~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~-----------~~g~iv~isS~~~ 163 (277)
T 2rhc_B 98 G--PVDVLVNNAGRPGG-GATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLER-----------GTGRIVNIASTGG 163 (277)
T ss_dssp C--SCSEEEECCCCCCC-SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHH-----------TEEEEEEECCGGG
T ss_pred C--CCCEEEECCCCCCC-CChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhc-----------CCeEEEEECcccc
Confidence 7 59999999998764 66778899999999999999999999999999 8775 5689999999998
Q ss_pred cccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC--------------------------C
Q psy11190 159 SIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS--------------------------N 212 (248)
Q Consensus 159 ~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~--------------------------~ 212 (248)
..+. ++...|+++|++++.|+++++.|++++||+||+|+||+++|++... .
T Consensus 164 ~~~~---~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 240 (277)
T 2rhc_B 164 KQGV---VHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIG 240 (277)
T ss_dssp TSCC---TTCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHSTTS
T ss_pred ccCC---CCCccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHHHhcCCCC
Confidence 8776 7788999999999999999999999999999999999999987321 1
Q ss_pred CCCchhhHHHHHHHHhhhcccccccceeeeCCeec
Q psy11190 213 APLEVGAATAGIIQFIQSLGEAHNGGFFEYTGKAI 247 (248)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~ 247 (248)
...+|+++++.++.++++.....+|+.+.++|...
T Consensus 241 r~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdGG~~ 275 (277)
T 2rhc_B 241 RYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGGLG 275 (277)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred CCcCHHHHHHHHHHHhCchhcCCCCcEEEECCCcc
Confidence 13589999999999998877889999999998743
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-39 Score=271.46 Aligned_cols=212 Identities=20% Similarity=0.256 Sum_probs=188.6
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||++|||+++|++|+++| ++|++++|+.++++++ ...++.++++|++|.++ ++.+++++.+.++
T Consensus 17 k~vlVTGas~gIG~aia~~l~~~G----~~V~~~~r~~~~~~~~-----~~~~~~~~~~Dv~d~~~-v~~~~~~~~~~~g 86 (266)
T 3p19_A 17 KLVVITGASSGIGEAIARRFSEEG----HPLLLLARRVERLKAL-----NLPNTLCAQVDVTDKYT-FDTAITRAEKIYG 86 (266)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT----CCEEEEESCHHHHHTT-----CCTTEEEEECCTTCHHH-HHHHHHHHHHHHC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC----CEEEEEECCHHHHHHh-----hcCCceEEEecCCCHHH-HHHHHHHHHHHCC
Confidence 789999999999999999999999 8999999997765543 12367889999999999 9999999999988
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|+++ +.|+||++||.++..+
T Consensus 87 --~iD~lvnnAg~~~~-~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-----------~~g~IV~isS~~~~~~ 152 (266)
T 3p19_A 87 --PADAIVNNAGMMLL-GQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKAR-----------NCGTIINISSIAGKKT 152 (266)
T ss_dssp --SEEEEEECCCCCCC-CCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----------TCCEEEEECCGGGTSC
T ss_pred --CCCEEEECCCcCCC-CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----------CCcEEEEEcChhhCCC
Confidence 59999999998765 778889999999999999999999999999999886 5799999999999887
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC-----------------CCchhhHHHHH
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA-----------------PLEVGAATAGI 224 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~-----------------~~~~~~~~~~~ 224 (248)
. ++...|+++|+++++|+++|+.|++++||+||+|+||+++|++..... ..+|+++++.+
T Consensus 153 ~---~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~av 229 (266)
T 3p19_A 153 F---PDHAAYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTSQQIKDGYDAWRVDMGGVLAADDVARAV 229 (266)
T ss_dssp C---TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSCHHHHHHHHHHHHHTTCCBCHHHHHHHH
T ss_pred C---CCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccchhhhHHHHhhcccccCCCCHHHHHHHH
Confidence 6 788999999999999999999999999999999999999999865432 35799999999
Q ss_pred HHHhhhccccccccee
Q psy11190 225 IQFIQSLGEAHNGGFF 240 (248)
Q Consensus 225 ~~~~~~~~~~~~g~~~ 240 (248)
+++++.+.....+.+.
T Consensus 230 ~~l~~~~~~~~~~~i~ 245 (266)
T 3p19_A 230 LFAYQQPQNVCIREIA 245 (266)
T ss_dssp HHHHHSCTTEEEEEEE
T ss_pred HHHHcCCCCccceeeE
Confidence 9999987665555544
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-39 Score=267.38 Aligned_cols=220 Identities=17% Similarity=0.160 Sum_probs=190.7
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
||++|||||++|||++++++|+++| ++|++++|+.++++++.++...+.++..+ |.++ ++.+++++.+.+
T Consensus 1 Mk~vlVTGas~gIG~~ia~~l~~~G----~~V~~~~r~~~~~~~~~~l~~~~~~~~~~-----d~~~-v~~~~~~~~~~~ 70 (254)
T 1zmt_A 1 MSTAIVTNVKHFGGMGSALRLSEAG----HTVACHDESFKQKDELEAFAETYPQLKPM-----SEQE-PAELIEAVTSAY 70 (254)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTT----CEEEECCGGGGSHHHHHHHHHHCTTSEEC-----CCCS-HHHHHHHHHHHH
T ss_pred CeEEEEeCCCchHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHHhcCCcEEEE-----CHHH-HHHHHHHHHHHh
Confidence 8999999999999999999999999 89999999988877765543334444443 6777 899999999988
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+ ++|+||||||......++.+.+.++|++.+++|+.+++++++.++|.|.++ +.++||++||..+..
T Consensus 71 g--~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----------~~g~iv~isS~~~~~ 137 (254)
T 1zmt_A 71 G--QVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKR-----------KSGHIIFITSATPFG 137 (254)
T ss_dssp S--CCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----------TCCEEEEECCSTTTS
T ss_pred C--CCCEEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----------CCcEEEEECCccccc
Confidence 7 599999999987223677788999999999999999999999999999876 578999999999987
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcce---------ecCCCCCC--------------CCCch
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWV---------KTDMGGSN--------------APLEV 217 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v---------~t~~~~~~--------------~~~~~ 217 (248)
+. ++...|+++|+++++|+++++.|++++||+||+|+||++ +|++.+.. ...+|
T Consensus 138 ~~---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~~~~~~~~~~~~p~~~~~~p 214 (254)
T 1zmt_A 138 PW---KELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQ 214 (254)
T ss_dssp CC---TTCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSSCBCH
T ss_pred CC---CCchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccccCCCcccccChHHHHHHhccCCCCCCcCH
Confidence 76 778899999999999999999999999999999999999 88875431 13589
Q ss_pred hhHHHHHHHHhhhcccccccceeeeCCee
Q psy11190 218 GAATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
+++++.+++++++.....+|+++.+||..
T Consensus 215 ~dvA~~v~~l~s~~~~~~tG~~~~vdgG~ 243 (254)
T 1zmt_A 215 KELGELVAFLASGSCDYLTGQVFWLAGGF 243 (254)
T ss_dssp HHHHHHHHHHHTTSCGGGTTCEEEESTTC
T ss_pred HHHHHHHHHHhCcccCCccCCEEEECCCc
Confidence 99999999999988888999999999864
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-39 Score=267.38 Aligned_cols=215 Identities=19% Similarity=0.200 Sum_probs=184.3
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||++|||+++|++|+++| ++|++++|+.+++.+..+.. .+.++++|++|.++ ++++++++.+.++
T Consensus 28 k~vlVTGas~gIG~aia~~l~~~G----~~V~~~~r~~~~~~~~~~~~----~~~~~~~Dv~~~~~-v~~~~~~~~~~~g 98 (260)
T 3gem_A 28 APILITGASQRVGLHCALRLLEHG----HRVIISYRTEHASVTELRQA----GAVALYGDFSCETG-IMAFIDLLKTQTS 98 (260)
T ss_dssp CCEEESSTTSHHHHHHHHHHHHTT----CCEEEEESSCCHHHHHHHHH----TCEEEECCTTSHHH-HHHHHHHHHHHCS
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC----CEEEEEeCChHHHHHHHHhc----CCeEEECCCCCHHH-HHHHHHHHHHhcC
Confidence 789999999999999999999999 89999999987654332211 37889999999999 9999999999987
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+||||||.... .. .+.+.++|++.+++|+.+++++++.++|.|.++ +.|+||++||..+..+
T Consensus 99 --~iD~lv~nAg~~~~-~~-~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~-----------~~g~iv~isS~~~~~~ 163 (260)
T 3gem_A 99 --SLRAVVHNASEWLA-ET-PGEEADNFTRMFSVHMLAPYLINLHCEPLLTAS-----------EVADIVHISDDVTRKG 163 (260)
T ss_dssp --CCSEEEECCCCCCC-CC-TTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTS-----------SSCEEEEECCGGGGTC
T ss_pred --CCCEEEECCCccCC-CC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----------CCcEEEEECChhhcCC
Confidence 69999999998754 33 566889999999999999999999999999885 5799999999999887
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC-------------CCchhhHHHHHHHHh
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA-------------PLEVGAATAGIIQFI 228 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~-------------~~~~~~~~~~~~~~~ 228 (248)
. ++...|+++|+++++|+++++.|+++ +|+||+|+||+++|++..... ..+|+++++.+++++
T Consensus 164 ~---~~~~~Y~asKaa~~~l~~~la~e~~~-~Irvn~v~PG~v~t~~~~~~~~~~~~~~~~p~~r~~~~edva~~v~~L~ 239 (260)
T 3gem_A 164 S---SKHIAYCATKAGLESLTLSFAARFAP-LVKVNGIAPALLMFQPKDDAAYRANALAKSALGIEPGAEVIYQSLRYLL 239 (260)
T ss_dssp C---SSCHHHHHHHHHHHHHHHHHHHHHTT-TCEEEEEEECTTCC---------------CCSCCCCCTHHHHHHHHHHH
T ss_pred C---CCcHhHHHHHHHHHHHHHHHHHHHCC-CCEEEEEeecccccCCCCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHh
Confidence 6 78899999999999999999999998 699999999999999743311 347999999999998
Q ss_pred hhcccccccceeeeCCee
Q psy11190 229 QSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 229 ~~~~~~~~g~~~~~~g~~ 246 (248)
. ....+|+.+.+||..
T Consensus 240 ~--~~~itG~~i~vdGG~ 255 (260)
T 3gem_A 240 D--STYVTGTTLTVNGGR 255 (260)
T ss_dssp H--CSSCCSCEEEESTTT
T ss_pred h--CCCCCCCEEEECCCc
Confidence 3 578899999999863
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-39 Score=273.18 Aligned_cols=222 Identities=25% Similarity=0.264 Sum_probs=190.8
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecC------------chhHHHHH-HHHhhcCCceeEEeeccCCchh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRN------------KDKAVELL-ALAQQHSNLHVIELDVTDFSKQ 68 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~------------~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~~ 68 (248)
|++|||||++|||+++|++|+++| ++|++++|+ .+.+++.. ++...+.++.++++|++|.++
T Consensus 11 k~vlVTGas~gIG~~ia~~l~~~G----~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~- 85 (287)
T 3pxx_A 11 KVVLVTGGARGQGRSHAVKLAEEG----ADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAA- 85 (287)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT----CEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHH-
T ss_pred CEEEEeCCCChHHHHHHHHHHHCC----CeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHH-
Confidence 789999999999999999999999 899999997 45555553 333345689999999999999
Q ss_pred hhhHHHHhhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCc
Q psy11190 69 QDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRA 148 (248)
Q Consensus 69 v~~~~~~i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~ 148 (248)
++++++++.+.++ ++|+||||||+... . .+.+.++|++.+++|+.+++++++.++|.|. ..+
T Consensus 86 v~~~~~~~~~~~g--~id~lv~nAg~~~~-~--~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-------------~~g 147 (287)
T 3pxx_A 86 VSRELANAVAEFG--KLDVVVANAGICPL-G--AHLPVQAFADAFDVDFVGVINTVHAALPYLT-------------SGA 147 (287)
T ss_dssp HHHHHHHHHHHHS--CCCEEEECCCCCCC-C--TTCCTHHHHHHHHHHTHHHHHHHHHHGGGCC-------------TTC
T ss_pred HHHHHHHHHHHcC--CCCEEEECCCcCcc-c--CcCCHHHHHHHhhhhhhhhHHHHHHHHHHhh-------------cCc
Confidence 9999999999988 59999999998754 3 3378899999999999999999999999983 468
Q ss_pred eEEEeecCCCcccccCC--------CCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC---------
Q psy11190 149 AIVNVSSIMGSIEDNTQ--------GGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS--------- 211 (248)
Q Consensus 149 ~iv~vss~~~~~~~~~~--------~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~--------- 211 (248)
+||++||..+..+.... ++...|+++|+++++|+++++.|++++||+||+|+||+++|+|.+.
T Consensus 148 ~iv~isS~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~ 227 (287)
T 3pxx_A 148 SIITTGSVAGLIAAAQPPGAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRP 227 (287)
T ss_dssp EEEEECCHHHHHHHHCCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHHHHHHCT
T ss_pred EEEEeccchhcccccccccccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccchhhhhcc
Confidence 99999999887654111 3456799999999999999999999999999999999999999753
Q ss_pred ---------------------CCCCchhhHHHHHHHHhhhcccccccceeeeCCee
Q psy11190 212 ---------------------NAPLEVGAATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 212 ---------------------~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
....+|+|+++.+++++++.....+|+.+.+||..
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdGG~ 283 (287)
T 3pxx_A 228 DLEAPSRADALLAFPAMQAMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAGA 283 (287)
T ss_dssp TSSSCCHHHHHHHGGGGCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred ccccchhHHHHhhhhhhcccCCCCCCHHHHHhhHheecchhhcCCCCceEeECchh
Confidence 11346899999999999998899999999999863
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-39 Score=269.58 Aligned_cols=213 Identities=25% Similarity=0.297 Sum_probs=191.4
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||++|||+++|++|+++| ++|++++|+.+.+. ....+++|++|.++ ++.+++++.+.++
T Consensus 29 k~vlVTGas~gIG~aia~~la~~G----~~V~~~~r~~~~~~----------~~~~~~~Dv~~~~~-~~~~~~~~~~~~g 93 (266)
T 3uxy_A 29 KVALVTGAAGGIGGAVVTALRAAG----ARVAVADRAVAGIA----------ADLHLPGDLREAAY-ADGLPGAVAAGLG 93 (266)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTT----CEEEECSSCCTTSC----------CSEECCCCTTSHHH-HHHHHHHHHHHHS
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC----CEEEEEeCCHHHHH----------hhhccCcCCCCHHH-HHHHHHHHHHhcC
Confidence 789999999999999999999999 89999999876532 22445899999999 9999999999988
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|+++ +.|+||++||..+..+
T Consensus 94 --~iD~lvnnAg~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-----------~~g~iv~isS~~~~~~ 159 (266)
T 3uxy_A 94 --RLDIVVNNAGVISR-GRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAA-----------GGGAIVNVASCWGLRP 159 (266)
T ss_dssp --CCCEEEECCCCCCC-BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----------TCEEEEEECCSBTTBC
T ss_pred --CCCEEEECCCCCCC-CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----------CCcEEEEECCHHhCCC
Confidence 59999999998876 778888999999999999999999999999999886 5799999999999887
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC----------------------CCCCchhh
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS----------------------NAPLEVGA 219 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~----------------------~~~~~~~~ 219 (248)
. ++...|+++|+++++|+++++.|++++||+||+|+||+++|++.+. ....+|++
T Consensus 160 ~---~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~ped 236 (266)
T 3uxy_A 160 G---PGHALYCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVPLGRIAEPED 236 (266)
T ss_dssp C---TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHH
T ss_pred C---CCChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhcCCCCCCcCHHH
Confidence 6 7889999999999999999999999999999999999999997421 01357999
Q ss_pred HHHHHHHHhhhcccccccceeeeCCee
Q psy11190 220 ATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 220 ~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
+++.++.++++.....+|+.+.+||..
T Consensus 237 vA~~v~~L~s~~~~~itG~~i~vdGG~ 263 (266)
T 3uxy_A 237 IADVVLFLASDAARYLCGSLVEVNGGK 263 (266)
T ss_dssp HHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred HHHHHHHHhCchhcCCcCCEEEECcCE
Confidence 999999999998889999999999863
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-39 Score=265.53 Aligned_cols=217 Identities=19% Similarity=0.225 Sum_probs=181.2
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
||++|||||++|||++++++|+++| ++|++++|+.++++++.+.. ..++.++.+|+++.++ ++++++++.+
T Consensus 1 Mk~vlVTGas~gIG~~~a~~l~~~G----~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~-v~~~~~~~~~-- 71 (230)
T 3guy_A 1 MSLIVITGASSGLGAELAKLYDAEG----KATYLTGRSESKLSTVTNCL--SNNVGYRARDLASHQE-VEQLFEQLDS-- 71 (230)
T ss_dssp --CEEEESTTSHHHHHHHHHHHHTT----CCEEEEESCHHHHHHHHHTC--SSCCCEEECCTTCHHH-HHHHHHSCSS--
T ss_pred CCEEEEecCCchHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHH--hhccCeEeecCCCHHH-HHHHHHHHhh--
Confidence 8999999999999999999999999 89999999988877664433 4578899999999999 8888777765
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
..|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|.++ .++||++||..+..
T Consensus 72 ---~~d~lv~~Ag~~~~-~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~------------~~~iv~isS~~~~~ 135 (230)
T 3guy_A 72 ---IPSTVVHSAGSGYF-GLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQ------------PVNVVMIMSTAAQQ 135 (230)
T ss_dssp ---CCSEEEECCCCCCC-SCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTS------------CCEEEEECCGGGTS
T ss_pred ---cCCEEEEeCCcCCC-CccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC------------CCeEEEEeecccCC
Confidence 25999999998765 777888999999999999999999999999999874 45999999999987
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC-------CCchhhHHHHHHHHhhh-cc
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA-------PLEVGAATAGIIQFIQS-LG 232 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~-------~~~~~~~~~~~~~~~~~-~~ 232 (248)
+. ++...|+++|+++++|+++|+.|++++||+||+|+||+++|++.+... ..+|+++++.++.+++. ..
T Consensus 136 ~~---~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~dvA~~i~~l~~~~~~ 212 (230)
T 3guy_A 136 PK---AQESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWETSGKSLDTSSFMSAEDAALMIHGALANIGN 212 (230)
T ss_dssp CC---TTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEECCC----------------CCCHHHHHHHHHHHCCEETT
T ss_pred CC---CCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEECCcccChHHHhcCCCCCcccCCCHHHHHHHHHHHHhCcCC
Confidence 76 788999999999999999999999999999999999999999976532 46899999999999874 45
Q ss_pred cccccceeeeCCe
Q psy11190 233 EAHNGGFFEYTGK 245 (248)
Q Consensus 233 ~~~~g~~~~~~g~ 245 (248)
...+|+.+..+..
T Consensus 213 ~~itg~~~~~~~~ 225 (230)
T 3guy_A 213 GYVSDITVNREGH 225 (230)
T ss_dssp EEEEEEEEEC---
T ss_pred CCccceeecCCCC
Confidence 6789998876654
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-40 Score=271.38 Aligned_cols=224 Identities=21% Similarity=0.247 Sum_probs=185.7
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||++|||+++|++|+++| ++|++++|+.++..+ . ...++.++++|++|.++ ++.+++.+.+ ++
T Consensus 10 k~vlVTGas~gIG~aia~~l~~~G----~~V~~~~r~~~~~~~---~--~~~~~~~~~~D~~~~~~-v~~~~~~~~~-~g 78 (257)
T 3tl3_A 10 AVAVVTGGASGLGLATTKRLLDAG----AQVVVLDIRGEDVVA---D--LGDRARFAAADVTDEAA-VASALDLAET-MG 78 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHT----CEEEEEESSCHHHHH---H--TCTTEEEEECCTTCHHH-HHHHHHHHHH-HS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC----CEEEEEeCchHHHHH---h--cCCceEEEECCCCCHHH-HHHHHHHHHH-hC
Confidence 789999999999999999999999 899999996543221 1 24578999999999999 9999998877 76
Q ss_pred CCCccEEEeccccCCcc---ccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 82 DQGLNVLVNNAGIAAKF---TRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
++|+||||||..... .+..+.+.++|++.+++|+.+++++++.++|.|.++.... ......|+||++||..+
T Consensus 79 --~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~---~~~~~~g~iv~isS~~~ 153 (257)
T 3tl3_A 79 --TLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVG---PNAEERGVIINTASVAA 153 (257)
T ss_dssp --CEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC-----CCCCSEEEEEECCCC-
T ss_pred --CCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccc---cccCCCcEEEEEcchhh
Confidence 599999999986531 2234578999999999999999999999999998731100 00015789999999999
Q ss_pred cccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC----------------CCCchhhHHH
Q psy11190 159 SIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN----------------APLEVGAATA 222 (248)
Q Consensus 159 ~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~----------------~~~~~~~~~~ 222 (248)
..+. +++..|+++|+++++|+++|+.|++++||+||+|+||+++|+|.+.. ...+|+|+++
T Consensus 154 ~~~~---~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~r~~~p~dva~ 230 (257)
T 3tl3_A 154 FDGQ---IGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASLPEEARASLGKQVPHPSRLGNPDEYGA 230 (257)
T ss_dssp -CCH---HHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC---CHHHHHHHHHTSSSSCSCBCHHHHHH
T ss_pred cCCC---CCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhccHHHHHHHHhcCCCCCCccCHHHHHH
Confidence 8876 77889999999999999999999999999999999999999997542 2357999999
Q ss_pred HHHHHhhhcccccccceeeeCCee
Q psy11190 223 GIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 223 ~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
.+++++++ +..+|+.+.+||..
T Consensus 231 ~v~~l~s~--~~itG~~i~vdGG~ 252 (257)
T 3tl3_A 231 LAVHIIEN--PMLNGEVIRLDGAI 252 (257)
T ss_dssp HHHHHHHC--TTCCSCEEEESTTC
T ss_pred HHHHHhcC--CCCCCCEEEECCCc
Confidence 99999976 78999999999863
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-39 Score=264.64 Aligned_cols=243 Identities=39% Similarity=0.608 Sum_probs=191.4
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
+|++|||||++|||++++++|+++|.. ++|++++|+.++++++.++ ...++.++++|++|.++ ++.+++++.+.+
T Consensus 3 ~k~vlItGasggiG~~la~~l~~~g~~--~~V~~~~r~~~~~~~l~~~--~~~~~~~~~~D~~~~~~-~~~~~~~~~~~~ 77 (250)
T 1yo6_A 3 PGSVVVTGANRGIGLGLVQQLVKDKNI--RHIIATARDVEKATELKSI--KDSRVHVLPLTVTCDKS-LDTFVSKVGEIV 77 (250)
T ss_dssp CSEEEESSCSSHHHHHHHHHHHTCTTC--CEEEEEESSGGGCHHHHTC--CCTTEEEEECCTTCHHH-HHHHHHHHHHHH
T ss_pred CCEEEEecCCchHHHHHHHHHHhcCCC--cEEEEEecCHHHHHHHHhc--cCCceEEEEeecCCHHH-HHHHHHHHHHhc
Confidence 478999999999999999999988721 5899999998877665433 25578999999999999 999999999888
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+..++|+||||||...+..++.+.+.+++++.+++|+.+++++++.++|.|.++.............++||++||..+..
T Consensus 78 g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~ 157 (250)
T 1yo6_A 78 GSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSI 157 (250)
T ss_dssp GGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCS
T ss_pred CCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCcccc
Confidence 62249999999998763367788899999999999999999999999999987421110000001168999999998876
Q ss_pred cccCC----CCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCCCCchhhHHHHHHHHhhhcccccc
Q psy11190 161 EDNTQ----GGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQSLGEAHN 236 (248)
Q Consensus 161 ~~~~~----~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (248)
+.... ++...|+++|++++.|+++++.+++++||+|++|+||+++|++.+.....+|+++++.++.++.......+
T Consensus 158 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 237 (250)
T 1yo6_A 158 TDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKNAALTVEQSTAELISSFNKLDNSHN 237 (250)
T ss_dssp TTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-------------HHHHHHHHHHHTTCCGGGT
T ss_pred CCcccccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCCCCCCCHHHHHHHHHHHHhcccccCC
Confidence 64221 45678999999999999999999999999999999999999998877788999999999999998777889
Q ss_pred cceeeeCCeecC
Q psy11190 237 GGFFEYTGKAIK 248 (248)
Q Consensus 237 g~~~~~~g~~~~ 248 (248)
|+++.++|..+|
T Consensus 238 G~~~~~~g~~~~ 249 (250)
T 1yo6_A 238 GRFFMRNLKPYE 249 (250)
T ss_dssp TCEEETTEEECC
T ss_pred CeEEEECCcCCC
Confidence 999999998875
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-39 Score=267.86 Aligned_cols=214 Identities=25% Similarity=0.364 Sum_probs=185.9
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
+|++|||||++|||++++++|+++| ++|++.+|+.++++ .+.++++|++|.++ ++++++++.+.+
T Consensus 21 ~k~vlVTGas~gIG~aia~~l~~~G----~~V~~~~r~~~~~~----------~~~~~~~Dl~d~~~-v~~~~~~~~~~~ 85 (253)
T 2nm0_A 21 SRSVLVTGGNRGIGLAIARAFADAG----DKVAITYRSGEPPE----------GFLAVKCDITDTEQ-VEQAYKEIEETH 85 (253)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT----CEEEEEESSSCCCT----------TSEEEECCTTSHHH-HHHHHHHHHHHT
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCC----CEEEEEeCChHhhc----------cceEEEecCCCHHH-HHHHHHHHHHHc
Confidence 3789999999999999999999999 89999999876532 37889999999999 999999999988
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+ ++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|.++ +.++||++||..+..
T Consensus 86 g--~iD~lv~nAg~~~~-~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-----------~~g~iv~isS~~~~~ 151 (253)
T 2nm0_A 86 G--PVEVLIANAGVTKD-QLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRA-----------KKGRVVLISSVVGLL 151 (253)
T ss_dssp C--SCSEEEEECSCCTT-TC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHH-----------TCEEEEEECCCCCCC
T ss_pred C--CCCEEEECCCCCCC-CChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----------CCCEEEEECchhhCC
Confidence 7 59999999998754 677788999999999999999999999999999876 578999999999887
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC---------------CCCchhhHHHHHH
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN---------------APLEVGAATAGII 225 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~---------------~~~~~~~~~~~~~ 225 (248)
+. ++...|+++|++++.|++.++.|++++||+||+|+||+++|++.... ...+|+++++.++
T Consensus 152 ~~---~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~i~ 228 (253)
T 2nm0_A 152 GS---AGQANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKVLTDEQRANIVSQVPLGRYARPEEIAATVR 228 (253)
T ss_dssp CH---HHHHHHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC---------CHHHHHTTCTTCSCBCHHHHHHHHH
T ss_pred CC---CCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence 66 66789999999999999999999999999999999999999986431 1358999999999
Q ss_pred HHhhhcccccccceeeeCCee
Q psy11190 226 QFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 226 ~~~~~~~~~~~g~~~~~~g~~ 246 (248)
.++++.....+|+.+.++|..
T Consensus 229 ~l~s~~~~~~tG~~i~vdGG~ 249 (253)
T 2nm0_A 229 FLASDDASYITGAVIPVDGGL 249 (253)
T ss_dssp HHHSGGGTTCCSCEEEESTTT
T ss_pred HHhCccccCCcCcEEEECCcc
Confidence 999988888999999999863
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-39 Score=267.36 Aligned_cols=223 Identities=24% Similarity=0.358 Sum_probs=196.0
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEe-ecCchhHHHHH-HHHhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFAT-CRNKDKAVELL-ALAQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~-~r~~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|++|||||++|||++++++|+++| ++|++. .|+.+++++.. ++.....++.++.+|++|.++ ++.+++++.+.
T Consensus 8 k~vlITGas~gIG~~~a~~l~~~G----~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~ 82 (255)
T 3icc_A 8 KVALVTGASRGIGRAIAKRLANDG----ALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHG-VEALYSSLDNE 82 (255)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTT----CEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHH-HHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCC----CeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHH-HHHHHHHHHHH
Confidence 799999999999999999999999 888885 77777777664 444445678899999999999 99999998887
Q ss_pred hcC----CCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeec
Q psy11190 80 VKD----QGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSS 155 (248)
Q Consensus 80 ~~~----~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss 155 (248)
++. +++|+||||||.... ..+.+.+.++|++.+++|+.+++++++.++|.|. +.++||++||
T Consensus 83 ~~~~~~~~~id~lv~nAg~~~~-~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-------------~~~~iv~isS 148 (255)
T 3icc_A 83 LQNRTGSTKFDILINNAGIGPG-AFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLR-------------DNSRIINISS 148 (255)
T ss_dssp HHHHHSSSCEEEEEECCCCCCC-BCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEE-------------EEEEEEEECC
T ss_pred hcccccCCcccEEEECCCCCCC-CChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhC-------------CCCEEEEeCC
Confidence 642 359999999998764 7778889999999999999999999999999983 3689999999
Q ss_pred CCCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC-----------------CCchh
Q psy11190 156 IMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA-----------------PLEVG 218 (248)
Q Consensus 156 ~~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~-----------------~~~~~ 218 (248)
.++..+. +++..|+++|+++++|+++++.|++++||+||+|+||+++|+|.+... ..+|+
T Consensus 149 ~~~~~~~---~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (255)
T 3icc_A 149 AATRISL---PDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSDPMMKQYATTISAFNRLGEVE 225 (255)
T ss_dssp GGGTSCC---TTBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTSHHHHHHHHHTSTTSSCBCHH
T ss_pred hhhccCC---CCcchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcccHHHHHhhhccCCcCCCCCHH
Confidence 9998877 788999999999999999999999999999999999999999976542 24799
Q ss_pred hHHHHHHHHhhhcccccccceeeeCCee
Q psy11190 219 AATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
++++.+++++++.....+|+.+.++|..
T Consensus 226 dva~~~~~l~s~~~~~~tG~~i~vdgG~ 253 (255)
T 3icc_A 226 DIADTAAFLASPDSRWVTGQLIDVSGGS 253 (255)
T ss_dssp HHHHHHHHHHSGGGTTCCSCEEEESSST
T ss_pred HHHHHHHHHhCcccCCccCCEEEecCCe
Confidence 9999999999988889999999999863
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-39 Score=266.93 Aligned_cols=216 Identities=20% Similarity=0.297 Sum_probs=189.3
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
+|++|||||++|||+++|++|+++| ++|++++|+.++.. ..++.++++|++|.++ ++++++++.+.+
T Consensus 28 ~k~vlVTGas~gIG~aia~~l~~~G----~~V~~~~r~~~~~~--------~~~~~~~~~Dv~d~~~-v~~~~~~~~~~~ 94 (260)
T 3un1_A 28 QKVVVITGASQGIGAGLVRAYRDRN----YRVVATSRSIKPSA--------DPDIHTVAGDISKPET-ADRIVREGIERF 94 (260)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHTT----CEEEEEESSCCCCS--------STTEEEEESCTTSHHH-HHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCC----CEEEEEeCChhhcc--------cCceEEEEccCCCHHH-HHHHHHHHHHHC
Confidence 3789999999999999999999999 99999999876532 2368899999999999 999999999998
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+ ++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|.++ +.++||++||..+..
T Consensus 95 g--~iD~lv~nAg~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-----------~~g~iv~isS~~~~~ 160 (260)
T 3un1_A 95 G--RIDSLVNNAGVFLA-KPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQ-----------GSGHIVSITTSLVDQ 160 (260)
T ss_dssp S--CCCEEEECCCCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----------TCEEEEEECCTTTTS
T ss_pred C--CCCEEEECCCCCCC-CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----------CCcEEEEEechhhcc
Confidence 8 59999999998765 777888999999999999999999999999999886 579999999988764
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC------------CCchhhHHHHHHHHh
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA------------PLEVGAATAGIIQFI 228 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~------------~~~~~~~~~~~~~~~ 228 (248)
+. +..+...|+++|+++++|+++++.|++++||+||+|+||+++|++..... ..+|+++++.++.+
T Consensus 161 ~~-~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~p~~r~~~~~dva~av~~L- 238 (260)
T 3un1_A 161 PM-VGMPSALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPAETHSTLAGLHPVGRMGEIRDVVDAVLYL- 238 (260)
T ss_dssp CB-TTCCCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCGGGHHHHHTTSTTSSCBCHHHHHHHHHHH-
T ss_pred CC-CCCccHHHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCHHHHHHHhccCCCCCCcCHHHHHHHHHHh-
Confidence 43 12456789999999999999999999999999999999999999875421 35799999999988
Q ss_pred hhcccccccceeeeCCee
Q psy11190 229 QSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 229 ~~~~~~~~g~~~~~~g~~ 246 (248)
......+|+.+.++|..
T Consensus 239 -~~~~~itG~~i~vdGG~ 255 (260)
T 3un1_A 239 -EHAGFITGEILHVDGGQ 255 (260)
T ss_dssp -HHCTTCCSCEEEESTTG
T ss_pred -cccCCCCCcEEEECCCe
Confidence 44567899999999863
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-39 Score=268.21 Aligned_cols=220 Identities=21% Similarity=0.279 Sum_probs=195.4
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||++|||++++++|+++| ++|++++|+.++++++.+.. +.++.++++|++|.++ ++++++.+.+.++
T Consensus 7 k~vlVTGas~giG~~ia~~l~~~G----~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~-v~~~~~~~~~~~g 79 (253)
T 1hxh_A 7 KVALVTGGASGVGLEVVKLLLGEG----AKVAFSDINEAAGQQLAAEL--GERSMFVRHDVSSEAD-WTLVMAAVQRRLG 79 (253)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT----CEEEEECSCHHHHHHHHHHH--CTTEEEECCCTTCHHH-HHHHHHHHHHHHC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHc--CCceEEEEccCCCHHH-HHHHHHHHHHHcC
Confidence 789999999999999999999999 89999999988777664433 4578899999999999 9999999999887
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|+++ + ++||++||..+..+
T Consensus 80 --~id~lv~~Ag~~~~-~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-----------~-g~iv~isS~~~~~~ 144 (253)
T 1hxh_A 80 --TLNVLVNNAGILLP-GDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKET-----------G-GSIINMASVSSWLP 144 (253)
T ss_dssp --SCCEEEECCCCCCC-BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-----------C-EEEEEECCGGGTSC
T ss_pred --CCCEEEECCCCCCC-CCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHc-----------C-CEEEEEcchhhcCC
Confidence 59999999998764 677888999999999999999999999999999874 4 89999999998877
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCC--CeEEEEecCcceecCCCCC----------------CC----CCchhh
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGD--KIIATAMHPGWVKTDMGGS----------------NA----PLEVGA 219 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~--~i~v~~v~PG~v~t~~~~~----------------~~----~~~~~~ 219 (248)
. ++...|+++|++++.|+++++.|++++ ||+||+|+||+++|++... .. ..+|++
T Consensus 145 ~---~~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~d 221 (253)
T 1hxh_A 145 I---EQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPER 221 (253)
T ss_dssp C---TTBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBTTCCEECHHH
T ss_pred C---CCCccHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhccchhhhHHHHhhhhccCccCCCCCHHH
Confidence 6 778899999999999999999999988 9999999999999986321 11 237999
Q ss_pred HHHHHHHHhhhcccccccceeeeCCee
Q psy11190 220 ATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 220 ~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
+++.++.++++.....+|+.+.++|..
T Consensus 222 vA~~~~~l~s~~~~~~tG~~~~vdgG~ 248 (253)
T 1hxh_A 222 IAQLVLFLASDESSVMSGSELHADNSI 248 (253)
T ss_dssp HHHHHHHHHSGGGTTCCSCEEEESSSC
T ss_pred HHHHHHHHcCccccCCCCcEEEECCCc
Confidence 999999999988888999999999864
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-39 Score=278.83 Aligned_cols=221 Identities=19% Similarity=0.208 Sum_probs=193.6
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchh-------HHHH-HHHHhhcCCceeEEeeccCCchhhhhHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDK-------AVEL-LALAQQHSNLHVIELDVTDFSKQQDVLF 73 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~-------~~~~-~~~~~~~~~~~~~~~D~~~~~~~v~~~~ 73 (248)
|++|||||++|||+++|++|+++| ++|++++|+.++ +++. .++...+.++.++++|++|.++ +++++
T Consensus 46 k~vlVTGas~GIG~aia~~La~~G----a~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~-v~~~~ 120 (346)
T 3kvo_A 46 CTVFITGASRGIGKAIALKAAKDG----ANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQ-ISAAV 120 (346)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTT----CEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHH-HHHHH
T ss_pred CEEEEeCCChHHHHHHHHHHHHCC----CEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHH-HHHHH
Confidence 789999999999999999999999 899999999875 4444 3344445678999999999999 99999
Q ss_pred HHhhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEe
Q psy11190 74 KDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNV 153 (248)
Q Consensus 74 ~~i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~v 153 (248)
+++.+.++ ++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|+++ +.++||++
T Consensus 121 ~~~~~~~g--~iDilVnnAG~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-----------~~g~IV~i 186 (346)
T 3kvo_A 121 EKAIKKFG--GIDILVNNASAISL-TNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKS-----------KVAHILNI 186 (346)
T ss_dssp HHHHHHHS--CCCEEEECCCCCCC-CCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTC-----------SSCEEEEE
T ss_pred HHHHHHcC--CCCEEEECCCCCCC-CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC-----------CCCEEEEE
Confidence 99999998 69999999998865 788889999999999999999999999999999885 57999999
Q ss_pred ecCCCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcc-eecCCCCCC-------CCCchhhHHHHHH
Q psy11190 154 SSIMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGW-VKTDMGGSN-------APLEVGAATAGII 225 (248)
Q Consensus 154 ss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~-v~t~~~~~~-------~~~~~~~~~~~~~ 225 (248)
||..+..+. ..+++..|+++|+++++|+++|+.|++ +||+||+|+||+ ++|++.+.. ...+|+++++.++
T Consensus 187 SS~~~~~~~-~~~~~~~Y~aSKaal~~l~~~la~e~~-~gIrvn~v~PG~~i~T~~~~~~~~~~~~~r~~~pedvA~~v~ 264 (346)
T 3kvo_A 187 SPPLNLNPV-WFKQHCAYTIAKYGMSMYVLGMAEEFK-GEIAVNALWPKTAIHTAAMDMLGGPGIESQCRKVDIIADAAY 264 (346)
T ss_dssp CCCCCCCGG-GTSSSHHHHHHHHHHHHHHHHHHHHTT-TTCEEEEEECSBCBCCHHHHHHCC--CGGGCBCTHHHHHHHH
T ss_pred CCHHHcCCC-CCCCchHHHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCccccHHHHhhccccccccCCCHHHHHHHHH
Confidence 999988762 126788999999999999999999999 899999999995 899864321 2468999999999
Q ss_pred HHhhhcccccccceeeeCCe
Q psy11190 226 QFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 226 ~~~~~~~~~~~g~~~~~~g~ 245 (248)
.++++ ....+|+++ +||.
T Consensus 265 ~L~s~-~~~itG~~i-vdgg 282 (346)
T 3kvo_A 265 SIFQK-PKSFTGNFV-IDEN 282 (346)
T ss_dssp HHHTS-CTTCCSCEE-EHHH
T ss_pred HHHhc-CCCCCceEE-ECCc
Confidence 99999 888999998 7775
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-39 Score=266.10 Aligned_cols=217 Identities=24% Similarity=0.300 Sum_probs=191.9
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||++|||++++++|+++| ++|++++|+.++ +++.+... . .++++|++|.++ ++.+++++.+.++
T Consensus 7 k~vlVTGas~gIG~~ia~~l~~~G----~~V~~~~r~~~~-~~~~~~~~---~-~~~~~D~~~~~~-~~~~~~~~~~~~g 76 (256)
T 2d1y_A 7 KGVLVTGGARGIGRAIAQAFAREG----ALVALCDLRPEG-KEVAEAIG---G-AFFQVDLEDERE-RVRFVEEAAYALG 76 (256)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT----CEEEEEESSTTH-HHHHHHHT---C-EEEECCTTCHHH-HHHHHHHHHHHHS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC----CEEEEEeCChhH-HHHHHHhh---C-CEEEeeCCCHHH-HHHHHHHHHHHcC
Confidence 789999999999999999999999 899999999877 55533332 4 789999999999 9999999999887
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|+++ +.++||++||..+..+
T Consensus 77 --~iD~lv~~Ag~~~~-~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-----------~~g~iv~isS~~~~~~ 142 (256)
T 2d1y_A 77 --RVDVLVNNAAIAAP-GSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKV-----------GGGAIVNVASVQGLFA 142 (256)
T ss_dssp --CCCEEEECCCCCCC-BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT-----------TCEEEEEECCGGGTSB
T ss_pred --CCCEEEECCCCCCC-CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----------CCcEEEEEccccccCC
Confidence 59999999998765 677888999999999999999999999999999875 5789999999998877
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC---------C------------CCCchhhH
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS---------N------------APLEVGAA 220 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~---------~------------~~~~~~~~ 220 (248)
. ++...|+++|++++.|+++++.|++++||+||+|+||+++|++... . ...+|+++
T Consensus 143 ~---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv 219 (256)
T 2d1y_A 143 E---QENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEV 219 (256)
T ss_dssp C---TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSSCBCHHHH
T ss_pred C---CCChhHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCchhhhccccccCCHHHHHHHHhcCCCCCCcCHHHH
Confidence 6 7788999999999999999999999999999999999999986321 1 13579999
Q ss_pred HHHHHHHhhhcccccccceeeeCCe
Q psy11190 221 TAGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 221 ~~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
++.++.++++.....+|+.+.++|.
T Consensus 220 A~~~~~l~s~~~~~~~G~~~~v~gG 244 (256)
T 2d1y_A 220 AEAVLFLASEKASFITGAILPVDGG 244 (256)
T ss_dssp HHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHHHHhCchhcCCCCCEEEECCC
Confidence 9999999988777889999999986
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-38 Score=266.72 Aligned_cols=227 Identities=21% Similarity=0.200 Sum_probs=189.8
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeec-CchhHHHHHHHHh-h-cCCceeEEeeccCC----chhhhhHHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCR-NKDKAVELLALAQ-Q-HSNLHVIELDVTDF----SKQQDVLFK 74 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r-~~~~~~~~~~~~~-~-~~~~~~~~~D~~~~----~~~v~~~~~ 74 (248)
|++|||||++|||++++++|+++| ++|++++| +.++++++.+.+. . +.++.++++|++|. ++ ++.+++
T Consensus 12 k~~lVTGas~gIG~~ia~~l~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~~~ 86 (276)
T 1mxh_A 12 PAAVITGGARRIGHSIAVRLHQQG----FRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDC-CEDIID 86 (276)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTT----CEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHH-HHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC----CEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHH-HHHHHH
Confidence 689999999999999999999999 89999999 8877777644333 2 45788999999999 88 999999
Q ss_pred HhhhhhcCCCccEEEeccccCCccccCCCCCh-----------hhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCC
Q psy11190 75 DISDVVKDQGLNVLVNNAGIAAKFTRLGLLKP-----------EQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPL 143 (248)
Q Consensus 75 ~i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~ 143 (248)
++.+.++ ++|+||||||.... .++.+.+. ++|++.+++|+.+++++++.++|.|. ++...
T Consensus 87 ~~~~~~g--~id~lv~nAg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~~~~----- 157 (276)
T 1mxh_A 87 CSFRAFG--RCDVLVNNASAYYP-TPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQG-EGGAW----- 157 (276)
T ss_dssp HHHHHHS--CCCEEEECCCCCCC-CCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC------------
T ss_pred HHHHhcC--CCCEEEECCCCCCC-CCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHh-cCCCC-----
Confidence 9999887 59999999998764 66777787 99999999999999999999999987 31000
Q ss_pred CCCCceEEEeecCCCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC-----------C
Q psy11190 144 GSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS-----------N 212 (248)
Q Consensus 144 ~~~~~~iv~vss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~-----------~ 212 (248)
....++||++||..+..+. +++..|+++|++++.|+++++.|++++||+||+|+||+++|+ ... .
T Consensus 158 ~~~~g~iv~isS~~~~~~~---~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-~~~~~~~~~~~~~~~ 233 (276)
T 1mxh_A 158 RSRNLSVVNLCDAMTDLPL---PGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP-PAMPQETQEEYRRKV 233 (276)
T ss_dssp -CCCEEEEEECCGGGGSCC---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-SSSCHHHHHHHHTTC
T ss_pred CCCCcEEEEECchhhcCCC---CCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC-ccCCHHHHHHHHhcC
Confidence 0013899999999998776 788899999999999999999999999999999999999998 210 0
Q ss_pred ---C-CCchhhHHHHHHHHhhhcccccccceeeeCCee
Q psy11190 213 ---A-PLEVGAATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 213 ---~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
. ..+|+++++.++.++++.....+|+++.++|..
T Consensus 234 p~~r~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~ 271 (276)
T 1mxh_A 234 PLGQSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGL 271 (276)
T ss_dssp TTTSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred CCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCch
Confidence 1 458999999999999887788899999999863
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-38 Score=267.01 Aligned_cols=222 Identities=22% Similarity=0.208 Sum_probs=191.2
Q ss_pred ceEEEecCC--CchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCN--RGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas--~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|++|||||+ +|||++++++|+++| ++|++++|+.+..+.+.++....+.+.++++|++|.++ ++.+++++.+.
T Consensus 22 k~vlVTGas~~~gIG~~ia~~l~~~G----~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~-v~~~~~~~~~~ 96 (285)
T 2p91_A 22 KRALITGVANERSIAYGIAKSFHREG----AQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDED-IKNLKKFLEEN 96 (285)
T ss_dssp CEEEECCCSSTTSHHHHHHHHHHHTT----CEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHH-HHHHHHHHHHH
T ss_pred CEEEEECCCCCCcHHHHHHHHHHHcC----CEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHH-HHHHHHHHHHH
Confidence 689999999 999999999999999 89999999985222233443333457889999999999 99999999998
Q ss_pred hcCCCccEEEeccccCCc---cccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecC
Q psy11190 80 VKDQGLNVLVNNAGIAAK---FTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSI 156 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~ 156 (248)
++ ++|+||||||.... ..++.+.+.++|++.+++|+.+++++++.++|.|.+ ..++||++||.
T Consensus 97 ~g--~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~------------~~g~iv~isS~ 162 (285)
T 2p91_A 97 WG--SLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEG------------RNGAIVTLSYY 162 (285)
T ss_dssp TS--CCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTT------------SCCEEEEEECG
T ss_pred cC--CCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH------------cCCEEEEEccc
Confidence 87 59999999998643 145667889999999999999999999999999975 35899999999
Q ss_pred CCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC-----------------CCchhh
Q psy11190 157 MGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA-----------------PLEVGA 219 (248)
Q Consensus 157 ~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~-----------------~~~~~~ 219 (248)
.+..+. ++...|+++|+++++|+++++.|++++||+||+|+||+++|++.+... ..+|++
T Consensus 163 ~~~~~~---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~d 239 (285)
T 2p91_A 163 GAEKVV---PHYNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITGFHLLMEHTTKVNPFGKPITIED 239 (285)
T ss_dssp GGTSBC---TTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTTHHHHHHHHHHHSTTSSCCCHHH
T ss_pred hhccCC---CCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccchHHHHHHHHhcCCCCCCcCHHH
Confidence 988776 778899999999999999999999999999999999999999865321 358999
Q ss_pred HHHHHHHHhhhcccccccceeeeCCe
Q psy11190 220 ATAGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 220 ~~~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
+++.++.++++.....+|+++.++|.
T Consensus 240 va~~~~~l~s~~~~~~tG~~~~vdgg 265 (285)
T 2p91_A 240 VGDTAVFLCSDWARAITGEVVHVDNG 265 (285)
T ss_dssp HHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred HHHHHHHHcCCcccCCCCCEEEECCC
Confidence 99999999988778889999999986
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-39 Score=269.89 Aligned_cols=222 Identities=27% Similarity=0.279 Sum_probs=193.3
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhh-cC---CceeEEeeccCCchhhhhHHHHhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQ-HS---NLHVIELDVTDFSKQQDVLFKDIS 77 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~-~~---~~~~~~~D~~~~~~~v~~~~~~i~ 77 (248)
|++|||||++|||+++|++|+++| ++|++++|+.++++++.+.... +. ++.++++|++|.++ ++++++++.
T Consensus 7 k~vlVTGas~gIG~~ia~~l~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-v~~~~~~~~ 81 (280)
T 1xkq_A 7 KTVIITGSSNGIGRTTAILFAQEG----ANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDG-QDQIINSTL 81 (280)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHH-HHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHH-HHHHHHHHH
Confidence 789999999999999999999999 8999999999887777443332 33 68899999999999 999999999
Q ss_pred hhhcCCCccEEEeccccCCcccc----CCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEe
Q psy11190 78 DVVKDQGLNVLVNNAGIAAKFTR----LGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNV 153 (248)
Q Consensus 78 ~~~~~~~iD~lv~~ag~~~~~~~----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~v 153 (248)
+.++ ++|+||||||.... .+ +.+.+.++|++.+++|+.+++++++.++|.|.++ + ++||++
T Consensus 82 ~~~g--~iD~lv~nAg~~~~-~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----------~-g~iv~i 146 (280)
T 1xkq_A 82 KQFG--KIDVLVNNAGAAIP-DAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVAS-----------K-GEIVNV 146 (280)
T ss_dssp HHHS--CCCEEEECCCCCCC-CTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----------T-CEEEEE
T ss_pred HhcC--CCCEEEECCCCCCC-CCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcC-----------C-CcEEEe
Confidence 9887 59999999998754 44 6678899999999999999999999999999874 4 899999
Q ss_pred ecCCCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC---------------------
Q psy11190 154 SSIMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN--------------------- 212 (248)
Q Consensus 154 ss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~--------------------- 212 (248)
||..+..+. .++...|+++|+++++|+++++.|++++||+||+|+||+++|++....
T Consensus 147 sS~~~~~~~--~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (280)
T 1xkq_A 147 SSIVAGPQA--QPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECI 224 (280)
T ss_dssp CCGGGSSSC--CCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTC
T ss_pred cCccccCCC--CCcccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHHHHcCC
Confidence 999887543 155778999999999999999999999999999999999999974321
Q ss_pred ---CCCchhhHHHHHHHHhhhc-ccccccceeeeCCe
Q psy11190 213 ---APLEVGAATAGIIQFIQSL-GEAHNGGFFEYTGK 245 (248)
Q Consensus 213 ---~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~g~ 245 (248)
...+|+++++.+++++++. ....+|+.+.++|.
T Consensus 225 p~~~~~~pedvA~~v~~l~s~~~~~~~tG~~i~vdgG 261 (280)
T 1xkq_A 225 PIGAAGKPEHIANIILFLADRNLSFYILGQSIVADGG 261 (280)
T ss_dssp TTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTT
T ss_pred CCCCCCCHHHHHHHHHHhcCcccccCccCCeEEECCC
Confidence 1357999999999999887 77899999999986
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-39 Score=269.53 Aligned_cols=217 Identities=19% Similarity=0.269 Sum_probs=190.2
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|+++||||++|||++++++|+++| ++|++++|+.++++++.+.. ..++.++++|++|.++ ++.+++++.+.++
T Consensus 7 k~vlITGas~gIG~aia~~l~~~G----~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~-v~~~~~~~~~~~g 79 (263)
T 2a4k_A 7 KTILVTGAASGIGRAALDLFAREG----ASLVAVDREERLLAEAVAAL--EAEAIAVVADVSDPKA-VEAVFAEALEEFG 79 (263)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHTC--CSSEEEEECCTTSHHH-HHHHHHHHHHHHS
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHh--cCceEEEEcCCCCHHH-HHHHHHHHHHHcC
Confidence 789999999999999999999999 89999999988776654333 2578899999999999 9999999999887
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.| + ..++||++||..+. +
T Consensus 80 --~iD~lvnnAg~~~~-~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~------------~~g~iv~isS~~~~-~ 142 (263)
T 2a4k_A 80 --RLHGVAHFAGVAHS-ALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVL-E------------EGGSLVLTGSVAGL-G 142 (263)
T ss_dssp --CCCEEEEGGGGTTT-TC----CHHHHHHHHHHHHHHHHHHHHHHHHHC-C------------TTCEEEEECCCTTC-C
T ss_pred --CCcEEEECCCCCCC-CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH-h------------cCCEEEEEecchhc-C
Confidence 59999999998764 677788999999999999999999999999999 5 36899999999987 6
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC---------------CCCchhhHHHHHHH
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN---------------APLEVGAATAGIIQ 226 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~---------------~~~~~~~~~~~~~~ 226 (248)
. ++...|+++|+++++|+++++.|++++||+||+|+||+++|++.... ...+|+++++.+++
T Consensus 143 ~---~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~ 219 (263)
T 2a4k_A 143 A---FGLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPPWAWEQEVGASPLGRAGRPEEVAQAALF 219 (263)
T ss_dssp H---HHHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCHHHHHHHHHTSTTCSCBCHHHHHHHHHH
T ss_pred C---CCcHHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 5 66789999999999999999999999999999999999999986532 13589999999999
Q ss_pred HhhhcccccccceeeeCCe
Q psy11190 227 FIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 227 ~~~~~~~~~~g~~~~~~g~ 245 (248)
++++.....+|+.+.++|.
T Consensus 220 l~s~~~~~~tG~~i~vdgG 238 (263)
T 2a4k_A 220 LLSEESAYITGQALYVDGG 238 (263)
T ss_dssp HHSGGGTTCCSCEEEESTT
T ss_pred HhCccccCCcCCEEEECCC
Confidence 9998788899999999986
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-39 Score=268.60 Aligned_cols=221 Identities=19% Similarity=0.218 Sum_probs=194.5
Q ss_pred ceEEEecCC--CchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCN--RGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas--~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|++|||||+ +|||+++|++|+++| ++|++++|+. ..+.+.++....+++.++++|++|.++ ++++++++.+.
T Consensus 27 k~vlVTGasg~~GIG~~ia~~l~~~G----~~V~~~~r~~-~~~~~~~l~~~~~~~~~~~~Dl~~~~~-v~~~~~~~~~~ 100 (280)
T 3nrc_A 27 KKILITGLLSNKSIAYGIAKAMHREG----AELAFTYVGQ-FKDRVEKLCAEFNPAAVLPCDVISDQE-IKDLFVELGKV 100 (280)
T ss_dssp CEEEECCCCSTTCHHHHHHHHHHHTT----CEEEEEECTT-CHHHHHHHHGGGCCSEEEECCTTCHHH-HHHHHHHHHHH
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHcC----CEEEEeeCch-HHHHHHHHHHhcCCceEEEeecCCHHH-HHHHHHHHHHH
Confidence 799999988 789999999999999 8999999987 333334555556678999999999999 99999999999
Q ss_pred hcCCCccEEEeccccCCcc---ccCCC-CChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeec
Q psy11190 80 VKDQGLNVLVNNAGIAAKF---TRLGL-LKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSS 155 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~---~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss 155 (248)
++ ++|+||||||..... ..+.+ .+.++|++.+++|+.+++++++.++|.|.+ ..++||++||
T Consensus 101 ~g--~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~------------~~g~iv~isS 166 (280)
T 3nrc_A 101 WD--GLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKN------------RNASMVALTY 166 (280)
T ss_dssp CS--SCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTT------------TTCEEEEEEC
T ss_pred cC--CCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhc------------CCCeEEEEec
Confidence 87 599999999987531 23333 789999999999999999999999999987 4689999999
Q ss_pred CCCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC-----------------CCchh
Q psy11190 156 IMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA-----------------PLEVG 218 (248)
Q Consensus 156 ~~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~-----------------~~~~~ 218 (248)
.++..+. +++..|+++|+++++|+++|+.|++++||+||+|+||+++|++.+... ..+|+
T Consensus 167 ~~~~~~~---~~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~pe 243 (280)
T 3nrc_A 167 IGAEKAM---PSYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNFKKMLDYNAMVSPLKKNVDIM 243 (280)
T ss_dssp GGGTSCC---TTTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTTHHHHHHHHHHHSTTCSCCCHH
T ss_pred cccccCC---CCchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcchHHHHHHHHhcCCCCCCCCHH
Confidence 9998877 788999999999999999999999999999999999999999865432 45899
Q ss_pred hHHHHHHHHhhhcccccccceeeeCCe
Q psy11190 219 AATAGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
++++.++.++++.....+|+.+.+||.
T Consensus 244 dvA~~v~~l~s~~~~~~tG~~i~vdgG 270 (280)
T 3nrc_A 244 EVGNTVAFLCSDMATGITGEVVHVDAG 270 (280)
T ss_dssp HHHHHHHHTTSGGGTTCCSCEEEESTT
T ss_pred HHHHHHHHHhCcccCCcCCcEEEECCC
Confidence 999999999998888899999999986
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-39 Score=267.94 Aligned_cols=221 Identities=26% Similarity=0.299 Sum_probs=185.4
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHH----hhcCCceeEEeeccCCchhhhhHHHHhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALA----QQHSNLHVIELDVTDFSKQQDVLFKDIS 77 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~~~D~~~~~~~v~~~~~~i~ 77 (248)
|++|||||++|||++++++|+++| ++|++++|+.++++++.+.. ....++.++++|++|.++ ++.+++++.
T Consensus 7 k~vlVTGas~gIG~~ia~~l~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~ 81 (278)
T 1spx_A 7 KVAIITGSSNGIGRATAVLFAREG----AKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAG-QDEILSTTL 81 (278)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHH-HHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHH-HHHHHHHHH
Confidence 689999999999999999999999 89999999988877764433 123468889999999999 999999999
Q ss_pred hhhcCCCccEEEeccccCCccccCCCC----ChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEe
Q psy11190 78 DVVKDQGLNVLVNNAGIAAKFTRLGLL----KPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNV 153 (248)
Q Consensus 78 ~~~~~~~iD~lv~~ag~~~~~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~v 153 (248)
+.++ ++|+||||||.... .++.+. +.++|++.+++|+.+++++++.++|.|.++ + ++||++
T Consensus 82 ~~~g--~id~lv~~Ag~~~~-~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-----------~-g~iv~i 146 (278)
T 1spx_A 82 GKFG--KLDILVNNAGAAIP-DSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSST-----------K-GEIVNI 146 (278)
T ss_dssp HHHS--CCCEEEECCC--------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----------T-CEEEEE
T ss_pred HHcC--CCCEEEECCCCCCC-cccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-----------C-CeEEEE
Confidence 9987 59999999998754 566666 899999999999999999999999999874 3 899999
Q ss_pred ecCCC-cccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC--------------------
Q psy11190 154 SSIMG-SIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN-------------------- 212 (248)
Q Consensus 154 ss~~~-~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~-------------------- 212 (248)
||..+ ..+. ++...|+++|++++.|+++++.|++++||+||+|+||+++|++....
T Consensus 147 sS~~~~~~~~---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (278)
T 1spx_A 147 SSIASGLHAT---PDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKEC 223 (278)
T ss_dssp CCTTSSSSCC---TTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHH
T ss_pred ecccccccCC---CCccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHhc
Confidence 99988 6665 77889999999999999999999999999999999999999985321
Q ss_pred ----CCCchhhHHHHHHHHhhhcccc-cccceeeeCCe
Q psy11190 213 ----APLEVGAATAGIIQFIQSLGEA-HNGGFFEYTGK 245 (248)
Q Consensus 213 ----~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~g~ 245 (248)
...+|+++++.++.++++.... .+|+.+.++|.
T Consensus 224 ~p~~~~~~~~dvA~~v~~l~s~~~~~~~tG~~~~vdgG 261 (278)
T 1spx_A 224 VPAGVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGG 261 (278)
T ss_dssp CTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTT
T ss_pred CCCcCCCCHHHHHHHHHHHcCccccCcccCcEEEECCC
Confidence 1347999999999999876665 89999999986
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-39 Score=272.06 Aligned_cols=222 Identities=27% Similarity=0.315 Sum_probs=193.7
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHH-hhcC---CceeEEeeccCCchhhhhHHHHhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALA-QQHS---NLHVIELDVTDFSKQQDVLFKDIS 77 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~-~~~~---~~~~~~~D~~~~~~~v~~~~~~i~ 77 (248)
|++|||||++|||+++|++|+++| ++|++++|+.++++++.+.+ ..+. ++.++++|++|.++ ++.+++++.
T Consensus 27 k~vlVTGas~gIG~aia~~L~~~G----~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~-v~~~~~~~~ 101 (297)
T 1xhl_A 27 KSVIITGSSNGIGRSAAVIFAKEG----AQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASG-QDDIINTTL 101 (297)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHH-HHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHH-HHHHHHHHH
Confidence 789999999999999999999999 89999999998887774333 3333 68899999999999 999999999
Q ss_pred hhhcCCCccEEEeccccCCcccc--CCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeec
Q psy11190 78 DVVKDQGLNVLVNNAGIAAKFTR--LGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSS 155 (248)
Q Consensus 78 ~~~~~~~iD~lv~~ag~~~~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss 155 (248)
+.++ ++|+||||||.... .+ +.+.+.++|++.+++|+.+++++++.++|.|.++ + |+||++||
T Consensus 102 ~~~g--~iD~lvnnAG~~~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-----------~-g~IV~isS 166 (297)
T 1xhl_A 102 AKFG--KIDILVNNAGANLA-DGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKT-----------K-GEIVNVSS 166 (297)
T ss_dssp HHHS--CCCEEEECCCCCCC-CSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----------T-CEEEEECC
T ss_pred HhcC--CCCEEEECCCcCcC-CCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc-----------C-CEEEEEcC
Confidence 9987 59999999998654 45 7788999999999999999999999999999874 4 89999999
Q ss_pred CCCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC-----------------------
Q psy11190 156 IMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN----------------------- 212 (248)
Q Consensus 156 ~~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~----------------------- 212 (248)
..+..+. .++...|+++|++++.|+++++.|++++||+||+|+||+++|++....
T Consensus 167 ~~~~~~~--~~~~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 244 (297)
T 1xhl_A 167 IVAGPQA--HSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPV 244 (297)
T ss_dssp GGGSSSC--CTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTT
T ss_pred chhccCC--CCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHHHHhcCCC
Confidence 9887543 145778999999999999999999999999999999999999974321
Q ss_pred -CCCchhhHHHHHHHHhhhc-ccccccceeeeCCe
Q psy11190 213 -APLEVGAATAGIIQFIQSL-GEAHNGGFFEYTGK 245 (248)
Q Consensus 213 -~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~g~ 245 (248)
...+|+++++.+++++++. ....+|+.+.++|.
T Consensus 245 ~r~~~pedvA~~v~~l~s~~~~~~itG~~i~vdGG 279 (297)
T 1xhl_A 245 GHCGKPEEIANIIVFLADRNLSSYIIGQSIVADGG 279 (297)
T ss_dssp SSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTT
T ss_pred CCCcCHHHHHHHHHHHhCCcccCCccCcEEEECCC
Confidence 1357999999999999887 77899999999986
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-38 Score=263.26 Aligned_cols=221 Identities=23% Similarity=0.348 Sum_probs=193.2
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH-HHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL-LALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|++|||||++|||++++++|+++| ++|++++|+.+ ++. .++...+.++.++++|++|.++ ++++++++.+.+
T Consensus 5 k~vlVTGas~giG~~ia~~l~~~G----~~V~~~~r~~~--~~~~~~l~~~~~~~~~~~~D~~~~~~-v~~~~~~~~~~~ 77 (255)
T 2q2v_A 5 KTALVTGSTSGIGLGIAQVLARAG----ANIVLNGFGDP--APALAEIARHGVKAVHHPADLSDVAQ-IEALFALAEREF 77 (255)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTT----CEEEEECSSCC--HHHHHHHHTTSCCEEEECCCTTSHHH-HHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC----CEEEEEeCCch--HHHHHHHHhcCCceEEEeCCCCCHHH-HHHHHHHHHHHc
Confidence 789999999999999999999999 89999999876 333 3333334578889999999999 999999999998
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+ ++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|+++ +.++||++||..+..
T Consensus 78 g--~id~lv~~Ag~~~~-~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-----------~~g~iv~isS~~~~~ 143 (255)
T 2q2v_A 78 G--GVDILVNNAGIQHV-APVEQFPLESWDKIIALNLSAVFHGTRLALPGMRAR-----------NWGRIINIASVHGLV 143 (255)
T ss_dssp S--SCSEEEECCCCCCC-BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----------TCEEEEEECCGGGTS
T ss_pred C--CCCEEEECCCCCCC-CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----------CCcEEEEEcCchhcc
Confidence 7 59999999998754 667788999999999999999999999999999875 568999999999887
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC-----------------------C---CC
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS-----------------------N---AP 214 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~-----------------------~---~~ 214 (248)
+. ++...|+++|+++++|+++++.|++++||+||+|+||+++|++... . ..
T Consensus 144 ~~---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 220 (255)
T 2q2v_A 144 GS---TGKAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAF 220 (255)
T ss_dssp CC---TTBHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHHHHHHTCCHHHHHHHHHTTTCTTCCC
T ss_pred CC---CCchhHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhhcccccccccchHHHHHHHHhccCCCCCC
Confidence 76 7788999999999999999999999999999999999999986310 0 13
Q ss_pred CchhhHHHHHHHHhhhcccccccceeeeCCee
Q psy11190 215 LEVGAATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
.+|+++++.++.++++.....+|+.+.++|..
T Consensus 221 ~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~ 252 (255)
T 2q2v_A 221 VTPEHLGELVLFLCSEAGSQVRGAAWNVDGGW 252 (255)
T ss_dssp BCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred cCHHHHHHHHHHHhCCccCCCCCCEEEECCCc
Confidence 47999999999999887778899999999863
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-38 Score=267.44 Aligned_cols=222 Identities=21% Similarity=0.255 Sum_probs=192.1
Q ss_pred ceEEEecCC--CchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCN--RGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas--~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|++|||||+ +|||++++++|+++| ++|++++|+.+..+.+.++....+.+.++++|++|.++ ++.+++++.+.
T Consensus 7 k~vlVTGas~~~gIG~~~a~~l~~~G----~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~-v~~~~~~~~~~ 81 (275)
T 2pd4_A 7 KKGLIVGVANNKSIAYGIAQSCFNQG----ATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEH-FKSLYNSVKKD 81 (275)
T ss_dssp CEEEEECCCSTTSHHHHHHHHHHTTT----CEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHH-HHHHHHHHHHH
T ss_pred CEEEEECCCCCCcHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHH-HHHHHHHHHHH
Confidence 799999999 999999999999999 89999999986222233443333458899999999999 99999999998
Q ss_pred hcCCCccEEEeccccCCc---cccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecC
Q psy11190 80 VKDQGLNVLVNNAGIAAK---FTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSI 156 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~ 156 (248)
++ ++|+||||||.... ..++.+.+.++|++.+++|+.+++++++.++|.|.+ .|+||++||.
T Consensus 82 ~g--~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-------------~g~iv~isS~ 146 (275)
T 2pd4_A 82 LG--SLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN-------------GASVLTLSYL 146 (275)
T ss_dssp TS--CEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE-------------EEEEEEEECG
T ss_pred cC--CCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc-------------CCEEEEEecc
Confidence 87 59999999998653 145667899999999999999999999999999853 4799999999
Q ss_pred CCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC-----------------CCCchhh
Q psy11190 157 MGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN-----------------APLEVGA 219 (248)
Q Consensus 157 ~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~-----------------~~~~~~~ 219 (248)
.+..+. ++...|+++|+++++|+++++.|++++||+||+|+||+++|++.+.. ...+|++
T Consensus 147 ~~~~~~---~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~p~d 223 (275)
T 2pd4_A 147 GSTKYM---AHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEE 223 (275)
T ss_dssp GGTSBC---TTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHH
T ss_pred hhcCCC---CCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhccccHHHHHHHHhcCCcCCCCCHHH
Confidence 988776 77889999999999999999999999999999999999999986432 1358999
Q ss_pred HHHHHHHHhhhcccccccceeeeCCee
Q psy11190 220 ATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 220 ~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
+++.+++++++.....+|+++.++|..
T Consensus 224 va~~~~~l~s~~~~~~tG~~~~vdgg~ 250 (275)
T 2pd4_A 224 VGNAGMYLLSSLSSGVSGEVHFVDAGY 250 (275)
T ss_dssp HHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHHHHHhCccccCCCCCEEEECCCc
Confidence 999999999887788999999999863
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-38 Score=263.51 Aligned_cols=224 Identities=17% Similarity=0.232 Sum_probs=195.7
Q ss_pred ceEEEecCC--CchhHHHHHHHHhCCCCCCceEEEeecCchhH-HHH-HHHHhh-cCCceeEEeeccCCchhhhhHHHHh
Q psy11190 2 KSILITGCN--RGLGLGMIKVLVGLGNNQPAHIFATCRNKDKA-VEL-LALAQQ-HSNLHVIELDVTDFSKQQDVLFKDI 76 (248)
Q Consensus 2 k~~lVtGas--~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~-~~~-~~~~~~-~~~~~~~~~D~~~~~~~v~~~~~~i 76 (248)
|++|||||+ +|||+++|++|+++| ++|++++|+.++. ++. .++... +.++.++++|++|.++ ++.+++++
T Consensus 21 k~vlITGas~~~giG~~~a~~l~~~G----~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~-v~~~~~~~ 95 (267)
T 3gdg_A 21 KVVVVTGASGPKGMGIEAARGCAEMG----AAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYES-CEKLVKDV 95 (267)
T ss_dssp CEEEETTCCSSSSHHHHHHHHHHHTS----CEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHH-HHHHHHHH
T ss_pred CEEEEECCCCCCChHHHHHHHHHHCC----CeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHH-HHHHHHHH
Confidence 789999999 999999999999999 8999999887654 343 333322 5689999999999999 99999999
Q ss_pred hhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecC
Q psy11190 77 SDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSI 156 (248)
Q Consensus 77 ~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~ 156 (248)
.+.++ ++|+||||||.... ..+.+.+.++|++.+++|+.+++++++.++|.|.++ +.++||++||.
T Consensus 96 ~~~~g--~id~li~nAg~~~~-~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-----------~~g~iv~isS~ 161 (267)
T 3gdg_A 96 VADFG--QIDAFIANAGATAD-SGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKER-----------GTGSLVITASM 161 (267)
T ss_dssp HHHTS--CCSEEEECCCCCCC-SCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----------TCCEEEEECCG
T ss_pred HHHcC--CCCEEEECCCcCCC-CCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHc-----------CCceEEEEccc
Confidence 99987 69999999998875 678888999999999999999999999999999886 57899999999
Q ss_pred CCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC---------------CCchhhHH
Q psy11190 157 MGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA---------------PLEVGAAT 221 (248)
Q Consensus 157 ~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~---------------~~~~~~~~ 221 (248)
++..+.. .++...|+++|+++++|+++++.|++++ |+||+|+||+++|++.+... ..+|++++
T Consensus 162 ~~~~~~~-~~~~~~Y~~sK~a~~~~~~~la~e~~~~-i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~r~~~~~dva 239 (267)
T 3gdg_A 162 SGHIANF-PQEQTSYNVAKAGCIHMARSLANEWRDF-ARVNSISPGYIDTGLSDFVPKETQQLWHSMIPMGRDGLAKELK 239 (267)
T ss_dssp GGTSCCS-SSCCHHHHHHHHHHHHHHHHHHHHTTTT-CEEEEEEECCEECSCGGGSCHHHHHHHHTTSTTSSCEETHHHH
T ss_pred cccccCC-CCCCCcchHHHHHHHHHHHHHHHHhccC-cEEEEEECCccccchhhhCCHHHHHHHHhcCCCCCCcCHHHHH
Confidence 9876541 1356789999999999999999999887 99999999999999875432 24699999
Q ss_pred HHHHHHhhhcccccccceeeeCCee
Q psy11190 222 AGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 222 ~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
+.++.++++.....+|+.+.+||..
T Consensus 240 ~~~~~l~s~~~~~itG~~i~vdgG~ 264 (267)
T 3gdg_A 240 GAYVYFASDASTYTTGADLLIDGGY 264 (267)
T ss_dssp HHHHHHHSTTCTTCCSCEEEESTTG
T ss_pred hHhheeecCccccccCCEEEECCce
Confidence 9999999988889999999999863
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-38 Score=262.53 Aligned_cols=217 Identities=24% Similarity=0.327 Sum_probs=176.2
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||++|||+++|++|+++| ++|++++|+.++++++.+.. ..++.++.+|+++.++ ++++++++ +
T Consensus 15 k~vlVTGas~gIG~~~a~~l~~~G----~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~-~~~~~~~~----~ 83 (249)
T 3f9i_A 15 KTSLITGASSGIGSAIARLLHKLG----SKVIISGSNEEKLKSLGNAL--KDNYTIEVCNLANKEE-CSNLISKT----S 83 (249)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHH--CSSEEEEECCTTSHHH-HHHHHHTC----S
T ss_pred CEEEEECCCChHHHHHHHHHHHCC----CEEEEEcCCHHHHHHHHHHh--ccCccEEEcCCCCHHH-HHHHHHhc----C
Confidence 789999999999999999999999 89999999988877775444 3578889999999888 77776544 3
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+||||||.... ..+.+.+.++|++.+++|+.+++++++.++|.|.++ +.++||++||.++..+
T Consensus 84 --~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-----------~~g~iv~isS~~~~~~ 149 (249)
T 3f9i_A 84 --NLDILVCNAGITSD-TLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQK-----------RYGRIINISSIVGIAG 149 (249)
T ss_dssp --CCSEEEECCC--------------CHHHHHHHHTHHHHHHHHHHHHHHHHH-----------TCEEEEEECCCCC--C
T ss_pred --CCCEEEECCCCCCC-CccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----------CCcEEEEEccHHhccC
Confidence 59999999998765 666778889999999999999999999999999876 5789999999999887
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC---------------CCchhhHHHHHHH
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA---------------PLEVGAATAGIIQ 226 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~---------------~~~~~~~~~~~~~ 226 (248)
. ++...|+++|+++++|+++++.|++++||+||+|+||+++|++.+... ...|+++++.++.
T Consensus 150 ~---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ 226 (249)
T 3f9i_A 150 N---PGQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLNEKQREAIVQKIPLGTYGIPEDVAYAVAF 226 (249)
T ss_dssp C---SCSHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------CCHHHHHHHHHHCTTCSCBCHHHHHHHHHH
T ss_pred C---CCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCcccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 7 788999999999999999999999999999999999999999976532 3469999999999
Q ss_pred HhhhcccccccceeeeCCee
Q psy11190 227 FIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 227 ~~~~~~~~~~g~~~~~~g~~ 246 (248)
++++.....+|+.+.++|..
T Consensus 227 l~s~~~~~~tG~~~~vdgG~ 246 (249)
T 3f9i_A 227 LASNNASYITGQTLHVNGGM 246 (249)
T ss_dssp HHSGGGTTCCSCEEEESTTS
T ss_pred HcCCccCCccCcEEEECCCE
Confidence 99988888999999999864
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-39 Score=265.42 Aligned_cols=211 Identities=23% Similarity=0.265 Sum_probs=186.4
Q ss_pred CceEEEecCCCchhHHHHHHHHh-CCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVG-LGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~-~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
||++|||||++|||+++|++|++ .| +.|++.+|+.+. ....+.++++|++|.++ ++++++.+.
T Consensus 4 ~k~vlITGas~gIG~~~a~~l~~~~g----~~v~~~~~~~~~---------~~~~~~~~~~Dv~~~~~-v~~~~~~~~-- 67 (244)
T 4e4y_A 4 MANYLVTGGSKGIGKAVVELLLQNKN----HTVINIDIQQSF---------SAENLKFIKADLTKQQD-ITNVLDIIK-- 67 (244)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTSTT----EEEEEEESSCCC---------CCTTEEEEECCTTCHHH-HHHHHHHTT--
T ss_pred CCeEEEeCCCChHHHHHHHHHHhcCC----cEEEEecccccc---------ccccceEEecCcCCHHH-HHHHHHHHH--
Confidence 68999999999999999999999 67 899999998752 12356899999999999 898886665
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
++ ++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|.+ .++||++||..+.
T Consensus 68 ~~--~id~lv~nAg~~~~-~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~-------------~g~iv~~sS~~~~ 131 (244)
T 4e4y_A 68 NV--SFDGIFLNAGILIK-GSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKV-------------GASIVFNGSDQCF 131 (244)
T ss_dssp TC--CEEEEEECCCCCCC-BCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEE-------------EEEEEEECCGGGT
T ss_pred hC--CCCEEEECCccCCC-CCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhcc-------------CcEEEEECCHHHc
Confidence 34 59999999998875 77888999999999999999999999999999865 4789999999998
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC--------------------------CC
Q psy11190 160 IEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS--------------------------NA 213 (248)
Q Consensus 160 ~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~--------------------------~~ 213 (248)
.+. ++...|+++|+++++|+++|+.|++++||+||+|+||+++|++.+. ..
T Consensus 132 ~~~---~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r 208 (244)
T 4e4y_A 132 IAK---PNSFAYTLSKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNR 208 (244)
T ss_dssp CCC---TTBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHHTTSTTSS
T ss_pred cCC---CCCchhHHHHHHHHHHHHHHHHHHHHcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHHhhcCCCCC
Confidence 876 7888999999999999999999999999999999999999997432 11
Q ss_pred CCchhhHHHHHHHHhhhcccccccceeeeCCee
Q psy11190 214 PLEVGAATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
..+|+++++.+++++++.....+|+.+.+||..
T Consensus 209 ~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~ 241 (244)
T 4e4y_A 209 IAQPQEIAELVIFLLSDKSKFMTGGLIPIDGGY 241 (244)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred CcCHHHHHHHHHHHhcCccccccCCeEeECCCc
Confidence 457999999999999998889999999999863
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-38 Score=270.05 Aligned_cols=210 Identities=17% Similarity=0.247 Sum_probs=187.7
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHH-HHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|++|||||++|||+++|++|+++| ++|++++|+.++++++.+ +...+.++.++++|++|.++ ++++++++.+.+
T Consensus 32 k~vlVTGas~gIG~~la~~l~~~G----~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~-v~~~~~~~~~~~ 106 (301)
T 3tjr_A 32 RAAVVTGGASGIGLATATEFARRG----ARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDE-MVRLADEAFRLL 106 (301)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH-HHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHH-HHHHHHHHHHhC
Confidence 689999999999999999999999 899999999998888744 44445689999999999999 999999999998
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+ ++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|.+++ ..|+||++||.++..
T Consensus 107 g--~id~lvnnAg~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~----------~~g~iv~isS~~~~~ 173 (301)
T 3tjr_A 107 G--GVDVVFSNAGIVVA-GPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQG----------TGGHIAFTASFAGLV 173 (301)
T ss_dssp S--SCSEEEECCCCCCC-BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC----------SCEEEEEECCGGGTS
T ss_pred C--CCCEEEECCCcCCC-CCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC----------CCcEEEEeCchhhcC
Confidence 7 59999999998865 7788889999999999999999999999999998862 268999999999988
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC-------------------------CCC
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN-------------------------APL 215 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~-------------------------~~~ 215 (248)
+. ++...|++||+++++|+++|+.|++++||+|++|+||+++|++.... ...
T Consensus 174 ~~---~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (301)
T 3tjr_A 174 PN---AGLGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGPLPTQDESV 250 (301)
T ss_dssp CC---TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHHHHC----------------------CC
T ss_pred CC---CCchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCccccccccccccccchhhccccChhhhccccccccCCC
Confidence 77 88899999999999999999999999999999999999999974320 135
Q ss_pred chhhHHHHHHHHhhhcc
Q psy11190 216 EVGAATAGIIQFIQSLG 232 (248)
Q Consensus 216 ~~~~~~~~~~~~~~~~~ 232 (248)
+|+++++.++..+....
T Consensus 251 ~pedvA~~i~~~l~~~~ 267 (301)
T 3tjr_A 251 SADDVARLTADAILANR 267 (301)
T ss_dssp CHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHhcCC
Confidence 89999999999997754
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-38 Score=258.56 Aligned_cols=222 Identities=18% Similarity=0.209 Sum_probs=196.9
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCc-------eEEEeecCchhHHHHHHHHh-hcCCceeEEeeccCCchhhhhHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPA-------HIFATCRNKDKAVELLALAQ-QHSNLHVIELDVTDFSKQQDVLF 73 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~-------~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~v~~~~ 73 (248)
|++|||||++|||++++++|+++| + +|++++|+.++++++.+... .+.++.++++|++|.++ ++.++
T Consensus 3 k~vlITGasggiG~~la~~l~~~G----~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-v~~~~ 77 (244)
T 2bd0_A 3 HILLITGAGKGIGRAIALEFARAA----RHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMAD-VRRLT 77 (244)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHHT----TTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHH-HHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHhc----CcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHH-HHHHH
Confidence 789999999999999999999999 7 99999999888777644333 34578899999999999 99999
Q ss_pred HHhhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEe
Q psy11190 74 KDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNV 153 (248)
Q Consensus 74 ~~i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~v 153 (248)
+++.+.++ ++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|.++ +.++||++
T Consensus 78 ~~~~~~~g--~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----------~~~~iv~i 143 (244)
T 2bd0_A 78 THIVERYG--HIDCLVNNAGVGRF-GALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQ-----------HSGHIFFI 143 (244)
T ss_dssp HHHHHHTS--CCSEEEECCCCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----------TCEEEEEE
T ss_pred HHHHHhCC--CCCEEEEcCCcCCc-CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-----------CCCEEEEE
Confidence 99999887 59999999998754 667778999999999999999999999999999875 57899999
Q ss_pred ecCCCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC------CCCchhhHHHHHHHH
Q psy11190 154 SSIMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN------APLEVGAATAGIIQF 227 (248)
Q Consensus 154 ss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~------~~~~~~~~~~~~~~~ 227 (248)
||..+..+. ++...|+++|++++.|+++++.+++++||++++|+||+++|++.... ...+|+++++.++.+
T Consensus 144 sS~~~~~~~---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~dva~~~~~l 220 (244)
T 2bd0_A 144 TSVAATKAF---RHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDEMQALMMMPEDIAAPVVQA 220 (244)
T ss_dssp CCGGGTSCC---TTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCSTTGGGSBCHHHHHHHHHHH
T ss_pred ecchhcCCC---CCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhccccccccCCCHHHHHHHHHHH
Confidence 999988766 77889999999999999999999999999999999999999997653 246899999999999
Q ss_pred hhhcccccccceeeeCCe
Q psy11190 228 IQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 228 ~~~~~~~~~g~~~~~~g~ 245 (248)
++......+|+++..+|.
T Consensus 221 ~~~~~~~~~g~~~~~~~~ 238 (244)
T 2bd0_A 221 YLQPSRTVVEEIILRPTS 238 (244)
T ss_dssp HTSCTTEEEEEEEEEETT
T ss_pred HhCCccccchheEEeccc
Confidence 998888888888877764
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-38 Score=263.75 Aligned_cols=221 Identities=20% Similarity=0.229 Sum_probs=190.6
Q ss_pred ceEEEecCC--CchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCN--RGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas--~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|++|||||+ +|||++++++|+++| ++|++++|+.+..+.+.++....+.+.++++|++|.++ ++.+++++.+.
T Consensus 9 k~vlVTGas~~~gIG~~ia~~l~~~G----~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~-v~~~~~~~~~~ 83 (261)
T 2wyu_A 9 KKALVMGVTNQRSLGFAIAAKLKEAG----AEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEE-LDALFAGVKEA 83 (261)
T ss_dssp CEEEEESCCSSSSHHHHHHHHHHHHT----CEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHH-HHHHHHHHHHH
T ss_pred CEEEEECCCCCCcHHHHHHHHHHHCC----CEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHH-HHHHHHHHHHH
Confidence 689999999 999999999999999 89999999975222233443333457899999999999 99999999998
Q ss_pred hcCCCccEEEeccccCCc---cccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecC
Q psy11190 80 VKDQGLNVLVNNAGIAAK---FTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSI 156 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~ 156 (248)
++ ++|+||||||.... ..++.+.+.++|++.+++|+.+++++++.++|.|.+ .|+||++||.
T Consensus 84 ~g--~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-------------~g~iv~isS~ 148 (261)
T 2wyu_A 84 FG--GLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE-------------GGGIVTLTYY 148 (261)
T ss_dssp HS--SEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE-------------EEEEEEEECG
T ss_pred cC--CCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhcc-------------CCEEEEEecc
Confidence 87 59999999998643 145667899999999999999999999999999853 4799999999
Q ss_pred CCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC-----------------CCCchhh
Q psy11190 157 MGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN-----------------APLEVGA 219 (248)
Q Consensus 157 ~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~-----------------~~~~~~~ 219 (248)
.+..+. ++...|+++|++++.|+++++.|++++||+||+|+||+++|++.+.. ...+|++
T Consensus 149 ~~~~~~---~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~d 225 (261)
T 2wyu_A 149 ASEKVV---PKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEE 225 (261)
T ss_dssp GGTSBC---TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCTTHHHHHHHHHHHSTTSSCCCHHH
T ss_pred cccCCC---CCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhccccHHHHHHHHhcCCCCCCCCHHH
Confidence 888776 77889999999999999999999999999999999999999985431 1357999
Q ss_pred HHHHHHHHhhhcccccccceeeeCCe
Q psy11190 220 ATAGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 220 ~~~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
+++.++.++++.....+|+.+.++|.
T Consensus 226 va~~v~~l~s~~~~~~tG~~~~vdgG 251 (261)
T 2wyu_A 226 VGNLGLFLLSPLASGITGEVVYVDAG 251 (261)
T ss_dssp HHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHHHHHcChhhcCCCCCEEEECCC
Confidence 99999999988778889999999986
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-38 Score=262.14 Aligned_cols=221 Identities=20% Similarity=0.265 Sum_probs=194.3
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||++|||++++++|+++| ++|++++|+.++++++.+... .++.++++|++|.++ ++++++++.+.++
T Consensus 13 k~vlVTGas~gIG~~ia~~l~~~G----~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~d~~~-v~~~~~~~~~~~g 85 (263)
T 3ak4_A 13 RKAIVTGGSKGIGAAIARALDKAG----ATVAIADLDVMAAQAVVAGLE--NGGFAVEVDVTKRAS-VDAAMQKAIDALG 85 (263)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHTCT--TCCEEEECCTTCHHH-HHHHHHHHHHHHT
T ss_pred CEEEEeCCCChHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHHh--cCCeEEEEeCCCHHH-HHHHHHHHHHHcC
Confidence 689999999999999999999999 899999999877665543322 267889999999999 9999999999987
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCC-CceEEEeecCCCcc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSS-RAAIVNVSSIMGSI 160 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~-~~~iv~vss~~~~~ 160 (248)
++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|.++ + .++||++||..+..
T Consensus 86 --~iD~lv~~Ag~~~~-~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-----------~~~g~iv~isS~~~~~ 151 (263)
T 3ak4_A 86 --GFDLLCANAGVSTM-RPAVDITDEEWDFNFDVNARGVFLANQIACRHFLAS-----------NTKGVIVNTASLAAKV 151 (263)
T ss_dssp --CCCEEEECCCCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----------TCCCEEEEECCGGGTS
T ss_pred --CCCEEEECCCcCCC-CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----------CCCeEEEEeccccccc
Confidence 59999999998754 667788999999999999999999999999999875 3 68999999999887
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC--------------------------CCC
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS--------------------------NAP 214 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~--------------------------~~~ 214 (248)
+. ++...|+++|++++.|+++++.|++++||+||+|+||+++|++... ...
T Consensus 152 ~~---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 228 (263)
T 3ak4_A 152 GA---PLLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRI 228 (263)
T ss_dssp CC---TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHTCTTCSC
T ss_pred CC---CCchhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHhcCCCCCC
Confidence 66 7788999999999999999999999999999999999999986321 113
Q ss_pred CchhhHHHHHHHHhhhcccccccceeeeCCee
Q psy11190 215 LEVGAATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
.+|+++++.++.++++.....+|+.+.++|..
T Consensus 229 ~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~ 260 (263)
T 3ak4_A 229 EEPEDVADVVVFLASDAARFMTGQGINVTGGV 260 (263)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSCEEEESSSS
T ss_pred cCHHHHHHHHHHHhCccccCCCCCEEEECcCE
Confidence 58999999999999887788999999999863
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-38 Score=263.08 Aligned_cols=220 Identities=17% Similarity=0.205 Sum_probs=189.2
Q ss_pred ceEEEecCC--CchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH-HHHHhhcCCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 2 KSILITGCN--RGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL-LALAQQHSNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 2 k~~lVtGas--~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
|++|||||+ +|||++++++|+++| ++|++++|+. +.++. .++....+...++++|++|.++ ++++++++.+
T Consensus 10 k~vlVTGas~~~gIG~~ia~~l~~~G----~~V~~~~r~~-~~~~~~~~l~~~~~~~~~~~~D~~~~~~-v~~~~~~~~~ 83 (265)
T 1qsg_A 10 KRILVTGVASKLSIAYGIAQAMHREG----AELAFTYQND-KLKGRVEEFAAQLGSDIVLQCDVAEDAS-IDTMFAELGK 83 (265)
T ss_dssp CEEEECCCCSTTSHHHHHHHHHHHTT----CEEEEEESST-TTHHHHHHHHHHTTCCCEEECCTTCHHH-HHHHHHHHHT
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHCC----CEEEEEcCcH-HHHHHHHHHHHhcCCcEEEEccCCCHHH-HHHHHHHHHH
Confidence 689999999 999999999999999 8999999987 33333 3343333455889999999999 9999999999
Q ss_pred hhcCCCccEEEeccccCCc---cccCCC-CChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEee
Q psy11190 79 VVKDQGLNVLVNNAGIAAK---FTRLGL-LKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVS 154 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~---~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vs 154 (248)
.++ ++|+||||||.... ..++.+ .+.++|++.+++|+.+++++++.++|.|.+ .|+||++|
T Consensus 84 ~~g--~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-------------~g~iv~is 148 (265)
T 1qsg_A 84 VWP--KFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP-------------GSALLTLS 148 (265)
T ss_dssp TCS--SEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE-------------EEEEEEEE
T ss_pred HcC--CCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc-------------CCEEEEEc
Confidence 887 59999999998653 134556 789999999999999999999999999853 47999999
Q ss_pred cCCCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC-----------------CCCch
Q psy11190 155 SIMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN-----------------APLEV 217 (248)
Q Consensus 155 s~~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~-----------------~~~~~ 217 (248)
|..+..+. +++..|+++|++++.|+++++.|++++||+||+|+||+++|++.+.. ...+|
T Consensus 149 S~~~~~~~---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 225 (265)
T 1qsg_A 149 YLGAERAI---PNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTI 225 (265)
T ss_dssp CGGGTSBC---TTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCH
T ss_pred chhhccCC---CCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcccccHHHHHHHHhcCCCCCCCCH
Confidence 99988776 77889999999999999999999999999999999999999985431 13589
Q ss_pred hhHHHHHHHHhhhcccccccceeeeCCe
Q psy11190 218 GAATAGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
+++++.+++++++.....+|+.+.++|.
T Consensus 226 ~dva~~v~~l~s~~~~~~tG~~~~vdgG 253 (265)
T 1qsg_A 226 EDVGNSAAFLCSDLSAGISGEVVHVDGG 253 (265)
T ss_dssp HHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred HHHHHHHHHHhCchhcCccCCEEEECCC
Confidence 9999999999988778889999999986
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-38 Score=259.79 Aligned_cols=213 Identities=23% Similarity=0.287 Sum_probs=184.4
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||++|||++++++|+++| ++|++++|+.+. ... .+.++++|++|.++ ++.+++++.+.++
T Consensus 8 k~vlVTGas~giG~~ia~~l~~~G----~~V~~~~r~~~~--------~~~-~~~~~~~D~~d~~~-~~~~~~~~~~~~g 73 (250)
T 2fwm_X 8 KNVWVTGAGKGIGYATALAFVEAG----AKVTGFDQAFTQ--------EQY-PFATEVMDVADAAQ-VAQVCQRLLAETE 73 (250)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT----CEEEEEESCCCS--------SCC-SSEEEECCTTCHHH-HHHHHHHHHHHCS
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC----CEEEEEeCchhh--------hcC-CceEEEcCCCCHHH-HHHHHHHHHHHcC
Confidence 789999999999999999999999 899999998752 111 27889999999999 9999999999887
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|+++ +.++||++||..+..+
T Consensus 74 --~id~lv~~Ag~~~~-~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-----------~~g~iv~isS~~~~~~ 139 (250)
T 2fwm_X 74 --RLDALVNAAGILRM-GATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQ-----------RGGAIVTVASDAAHTP 139 (250)
T ss_dssp --CCCEEEECCCCCCC-CCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----------TCCEEEEECCGGGTSC
T ss_pred --CCCEEEECCCcCCC-CCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhc-----------CCCEEEEECchhhCCC
Confidence 59999999998764 677888999999999999999999999999999876 5789999999998877
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC---------------------C----CCc
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN---------------------A----PLE 216 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~---------------------~----~~~ 216 (248)
. ++...|+++|++++.|+++++.|++++||+||+|+||+++|++.... . ..+
T Consensus 140 ~---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 216 (250)
T 2fwm_X 140 R---IGMSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIAR 216 (250)
T ss_dssp C---TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC------------------------------------C
T ss_pred C---CCCchHHHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCccccccccChhHHHHHHhhhhhcccccCCCCCCcC
Confidence 6 77889999999999999999999999999999999999999975321 0 246
Q ss_pred hhhHHHHHHHHhhhcccccccceeeeCCe
Q psy11190 217 VGAATAGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
|+++++.+++++++.....+|+.+.++|.
T Consensus 217 p~dvA~~v~~l~s~~~~~~tG~~i~vdGG 245 (250)
T 2fwm_X 217 PQEIANTILFLASDLASHITLQDIVVDGG 245 (250)
T ss_dssp HHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence 89999999999988888899999999986
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-38 Score=259.36 Aligned_cols=212 Identities=24% Similarity=0.338 Sum_probs=182.0
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||++|||++++++|+++| ++|++++|+.+++++ +..+++|++|.++ ++.+++++.+.++
T Consensus 16 k~vlVTGas~gIG~~ia~~l~~~G----~~V~~~~r~~~~~~~----------~~~~~~D~~~~~~-~~~~~~~~~~~~g 80 (247)
T 1uzm_A 16 RSVLVTGGNRGIGLAIAQRLAADG----HKVAVTHRGSGAPKG----------LFGVEVDVTDSDA-VDRAFTAVEEHQG 80 (247)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT----CEEEEEESSSCCCTT----------SEEEECCTTCHHH-HHHHHHHHHHHHS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC----CEEEEEeCChHHHHH----------hcCeeccCCCHHH-HHHHHHHHHHHcC
Confidence 789999999999999999999999 899999998765432 2248899999999 9999999999887
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|+++ +.++||++||..+..+
T Consensus 81 --~id~lv~~Ag~~~~-~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-----------~~g~iv~isS~~~~~~ 146 (247)
T 1uzm_A 81 --PVEVLVSNAGLSAD-AFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRN-----------KFGRMIFIGSVSGLWG 146 (247)
T ss_dssp --SCSEEEEECSCCC------CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----------TCEEEEEECCCCC---
T ss_pred --CCCEEEECCCCCCC-CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-----------CCCEEEEECCHhhccC
Confidence 59999999998764 677888999999999999999999999999999875 5689999999999877
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC---------------CCCCchhhHHHHHHH
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS---------------NAPLEVGAATAGIIQ 226 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~---------------~~~~~~~~~~~~~~~ 226 (248)
. ++...|+++|++++.|+++++.|++++||+||+|+||+++|++.+. ....+|+++++.+++
T Consensus 147 ~---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~ 223 (247)
T 1uzm_A 147 I---GNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERIQQGALQFIPAKRVGTPAEVAGVVSF 223 (247)
T ss_dssp -----CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSCHHHHHHHGGGCTTCSCBCHHHHHHHHHH
T ss_pred C---CCChhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 6 7788999999999999999999999999999999999999987432 114589999999999
Q ss_pred HhhhcccccccceeeeCCe
Q psy11190 227 FIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 227 ~~~~~~~~~~g~~~~~~g~ 245 (248)
++++.....+|+.+.++|.
T Consensus 224 l~s~~~~~~~G~~i~vdgG 242 (247)
T 1uzm_A 224 LASEDASYISGAVIPVDGG 242 (247)
T ss_dssp HHSGGGTTCCSCEEEESTT
T ss_pred HcCccccCCcCCEEEECCC
Confidence 9988778899999999986
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-38 Score=262.66 Aligned_cols=221 Identities=21% Similarity=0.303 Sum_probs=191.8
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchh-HHHHH-HHHhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDK-AVELL-ALAQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~-~~~~~-~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|++|||||++|||++++++|+++| ++|++++|+.++ .+++. ++...+.++.++++|++|.++ ++.+++++.+.
T Consensus 30 k~vlVTGas~gIG~~ia~~l~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~ 104 (283)
T 1g0o_A 30 KVALVTGAGRGIGREMAMELGRRG----CKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVED-IVRMFEEAVKI 104 (283)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT----CEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH-HHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC----CEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHH-HHHHHHHHHHH
Confidence 789999999999999999999999 899999998764 34443 333335578899999999999 99999999998
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
++ ++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.| + +.++||++||..+.
T Consensus 105 ~g--~iD~lv~~Ag~~~~-~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~------------~~g~iv~isS~~~~ 168 (283)
T 1g0o_A 105 FG--KLDIVCSNSGVVSF-GHVKDVTPEEFDRVFTINTRGQFFVAREAYKHL-E------------IGGRLILMGSITGQ 168 (283)
T ss_dssp HS--CCCEEEECCCCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHS-C------------TTCEEEEECCGGGT
T ss_pred cC--CCCEEEECCCcCCC-CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHH-h------------cCCeEEEEechhhc
Confidence 87 59999999998754 667788999999999999999999999999998 2 46899999999987
Q ss_pred ccccCCC-CCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC------------------------C--
Q psy11190 160 IEDNTQG-GFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS------------------------N-- 212 (248)
Q Consensus 160 ~~~~~~~-~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~------------------------~-- 212 (248)
.+. + +...|+++|+++++|+++++.|++++||+||+|+||+++|++... .
T Consensus 169 ~~~---~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 245 (283)
T 1g0o_A 169 AKA---VPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSP 245 (283)
T ss_dssp CSS---CSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCT
T ss_pred cCC---CCCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhcCCC
Confidence 765 4 378899999999999999999999999999999999999986321 1
Q ss_pred --CCCchhhHHHHHHHHhhhcccccccceeeeCCee
Q psy11190 213 --APLEVGAATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 213 --~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
...+|+++++.+++++++.....+|+.+.+||..
T Consensus 246 ~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdgG~ 281 (283)
T 1g0o_A 246 LRRVGLPIDIARVVCFLASNDGGWVTGKVIGIDGGA 281 (283)
T ss_dssp TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred CCCCcCHHHHHHHHHHHhCccccCcCCCEEEeCCCc
Confidence 1247999999999999988888999999999863
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-38 Score=258.08 Aligned_cols=224 Identities=22% Similarity=0.281 Sum_probs=196.1
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHH-h-hcCCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALA-Q-QHSNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~-~-~~~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
+|++|||||++|||++++++|+++| ++|++++|+.++++++.+.. . .+.++.++++|++|.++ ++++++++.+
T Consensus 2 ~k~vlItGasggiG~~~a~~l~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~ 76 (250)
T 2cfc_A 2 SRVAIVTGASSGNGLAIATRFLARG----DRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGD-VNAAIAATME 76 (250)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHH-HHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHH-HHHHHHHHHH
Confidence 4799999999999999999999999 89999999988877764333 2 24568899999999999 9999999999
Q ss_pred hhcCCCccEEEeccccCCcccc---CCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeec
Q psy11190 79 VVKDQGLNVLVNNAGIAAKFTR---LGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSS 155 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss 155 (248)
.++ ++|+||||||.... .+ +.+.+.+++++.+++|+.+++++++.++|.|.++ +.++||++||
T Consensus 77 ~~~--~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----------~~~~iv~isS 142 (250)
T 2cfc_A 77 QFG--AIDVLVNNAGITGN-SEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQ-----------GAGVIVNIAS 142 (250)
T ss_dssp HHS--CCCEEEECCCCCCC-TTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----------TCEEEEEECC
T ss_pred HhC--CCCEEEECCCCCCC-CCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-----------CCCEEEEECC
Confidence 887 59999999998654 44 6677899999999999999999999999999876 5689999999
Q ss_pred CCCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC-C----------------CCCchh
Q psy11190 156 IMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS-N----------------APLEVG 218 (248)
Q Consensus 156 ~~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~-~----------------~~~~~~ 218 (248)
..+..+. ++...|+++|++++.|++.++.++.++||++++|+||+++|++... . ...+|+
T Consensus 143 ~~~~~~~---~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (250)
T 2cfc_A 143 VASLVAF---PGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQPELRDQVLARIPQKEIGTAA 219 (250)
T ss_dssp GGGTSCC---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHTSHHHHHHHHTTCTTCSCBCHH
T ss_pred hhhccCC---CCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccCCHHHHHHHHhcCCCCCCcCHH
Confidence 9988776 7788999999999999999999999999999999999999998543 0 124799
Q ss_pred hHHHHHHHHhhhcccccccceeeeCCee
Q psy11190 219 AATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
++++.++.++++.....+|+.+.++|..
T Consensus 220 dva~~~~~l~~~~~~~~~G~~~~v~gG~ 247 (250)
T 2cfc_A 220 QVADAVMFLAGEDATYVNGAALVMDGAY 247 (250)
T ss_dssp HHHHHHHHHHSTTCTTCCSCEEEESTTG
T ss_pred HHHHHHHHHcCchhhcccCCEEEECCce
Confidence 9999999999887778899999999863
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-38 Score=264.00 Aligned_cols=218 Identities=23% Similarity=0.319 Sum_probs=191.5
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||++|||++++++|+++| ++|++++|+.++++++.+.. ..+.++++|++|.++ ++++++++.+.++
T Consensus 10 k~vlVTGas~gIG~~ia~~l~~~G----~~V~~~~r~~~~~~~~~~~~---~~~~~~~~Dv~d~~~-v~~~~~~~~~~~g 81 (270)
T 1yde_A 10 KVVVVTGGGRGIGAGIVRAFVNSG----ARVVICDKDESGGRALEQEL---PGAVFILCDVTQEDD-VKTLVSETIRRFG 81 (270)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHC---TTEEEEECCTTSHHH-HHHHHHHHHHHHS
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHh---cCCeEEEcCCCCHHH-HHHHHHHHHHHcC
Confidence 789999999999999999999999 89999999987766654332 247889999999999 9999999999987
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+||||||......++.+.+.++|++.+++|+.+++++++.++|.|.++ .++||++||..+..+
T Consensus 82 --~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~------------~g~iv~isS~~~~~~ 147 (270)
T 1yde_A 82 --RLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS------------QGNVINISSLVGAIG 147 (270)
T ss_dssp --CCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------------TCEEEEECCHHHHHC
T ss_pred --CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC------------CCEEEEEcCccccCC
Confidence 599999999987543567788999999999999999999999999999763 589999999988877
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC------------------CC---CCchhhH
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS------------------NA---PLEVGAA 220 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~------------------~~---~~~~~~~ 220 (248)
. ++...|+++|++++.|+++++.|++++||+||+|+||+++|++... .+ ..+|+|+
T Consensus 148 ~---~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dv 224 (270)
T 1yde_A 148 Q---AQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEV 224 (270)
T ss_dssp C---TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHHHH
T ss_pred C---CCCcccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHhhcCCCCCCcCHHHH
Confidence 6 7788999999999999999999999999999999999999986321 01 2479999
Q ss_pred HHHHHHHhhhcccccccceeeeCCe
Q psy11190 221 TAGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 221 ~~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
++.+++++++ ....+|+.+.+||.
T Consensus 225 a~~v~~L~s~-~~~itG~~i~vdGG 248 (270)
T 1yde_A 225 GAAAVFLASE-ANFCTGIELLVTGG 248 (270)
T ss_dssp HHHHHHHHHH-CTTCCSCEEEESTT
T ss_pred HHHHHHHccc-CCCcCCCEEEECCC
Confidence 9999999987 67889999999986
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-38 Score=260.62 Aligned_cols=221 Identities=19% Similarity=0.190 Sum_probs=186.2
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHH-HHhhcCCceeEEeeccCCchhhhhHHHHhhhh-
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIELDVTDFSKQQDVLFKDISDV- 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~- 79 (248)
|++|||||++|||++++++|+++| ++|++++|+.++++++.+ +...+.++.++++|++|.++ ++.+++.+.+.
T Consensus 6 k~vlVTGas~gIG~~ia~~l~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-v~~~~~~~~~~~ 80 (260)
T 2qq5_A 6 QVCVVTGASRGIGRGIALQLCKAG----ATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESE-VRSLFEQVDREQ 80 (260)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHH-HHHHHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHH-HHHHHHHHHHhc
Confidence 789999999999999999999999 899999999888777643 33335578899999999999 99999998876
Q ss_pred hcCCCccEEEeccc--cCC----ccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEe
Q psy11190 80 VKDQGLNVLVNNAG--IAA----KFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNV 153 (248)
Q Consensus 80 ~~~~~iD~lv~~ag--~~~----~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~v 153 (248)
++ ++|+|||||| ... ...++.+.+.++|++.+++|+.+++++++.++|.|.++ +.|+||++
T Consensus 81 ~g--~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----------~~g~iv~i 147 (260)
T 2qq5_A 81 QG--RLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPA-----------GQGLIVVI 147 (260)
T ss_dssp TT--CCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGG-----------TCCEEEEE
T ss_pred CC--CceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhc-----------CCcEEEEE
Confidence 66 5999999995 320 12566778889999999999999999999999999875 57899999
Q ss_pred ecCCCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC----------------C---
Q psy11190 154 SSIMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA----------------P--- 214 (248)
Q Consensus 154 ss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~----------------~--- 214 (248)
||..+..+ .+...|+++|+++++|+++++.|++++||+||+|+||+++|+|..... +
T Consensus 148 sS~~~~~~----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (260)
T 2qq5_A 148 SSPGSLQY----MFNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAFSS 223 (260)
T ss_dssp CCGGGTSC----CSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC----------------------CH
T ss_pred cChhhcCC----CCCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhccccccchhHHHHHHhhhcc
Confidence 99988754 345789999999999999999999999999999999999999854310 1
Q ss_pred -CchhhHHHHHHHHhhhcc-cccccceeeeCC
Q psy11190 215 -LEVGAATAGIIQFIQSLG-EAHNGGFFEYTG 244 (248)
Q Consensus 215 -~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~g 244 (248)
.+|+++++.+++++++.. ...+|+++..++
T Consensus 224 ~~~pe~va~~v~~l~s~~~~~~itG~~i~~~~ 255 (260)
T 2qq5_A 224 AETTELSGKCVVALATDPNILSLSGKVLPSCD 255 (260)
T ss_dssp HHHHHHHHHHHHHHHTCTTGGGGTTCEEEHHH
T ss_pred CCCHHHHHHHHHHHhcCcccccccceeechhh
Confidence 268999999999998865 368999987653
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-37 Score=254.06 Aligned_cols=217 Identities=19% Similarity=0.234 Sum_probs=189.2
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||++|||++++++|+++| ++|++++|+.++ +.+.. .+.++++|+++ ++ ++.+++++.+.++
T Consensus 3 k~vlVTGas~giG~~~a~~l~~~G----~~V~~~~r~~~~---~~~~~----~~~~~~~D~~~-~~-~~~~~~~~~~~~g 69 (239)
T 2ekp_A 3 RKALVTGGSRGIGRAIAEALVARG----YRVAIASRNPEE---AAQSL----GAVPLPTDLEK-DD-PKGLVKRALEALG 69 (239)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT----CEEEEEESSCHH---HHHHH----TCEEEECCTTT-SC-HHHHHHHHHHHHT
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC----CEEEEEeCCHHH---HHHhh----CcEEEecCCch-HH-HHHHHHHHHHHcC
Confidence 789999999999999999999999 899999999766 22222 27889999999 88 9999999998887
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|.++ +.++||++||..+..+
T Consensus 70 --~id~lv~~Ag~~~~-~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-----------~~g~iv~isS~~~~~~ 135 (239)
T 2ekp_A 70 --GLHVLVHAAAVNVR-KPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEA-----------GWGRVLFIGSVTTFTA 135 (239)
T ss_dssp --SCCEEEECCCCCCC-CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----------TCEEEEEECCGGGTSC
T ss_pred --CCCEEEECCCCCCC-CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----------CCcEEEEECchhhccC
Confidence 59999999998764 677888999999999999999999999999999876 5789999999988764
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC--------------C---CCCchhhHHHHH
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS--------------N---APLEVGAATAGI 224 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~--------------~---~~~~~~~~~~~~ 224 (248)
. ..++...|+++|++++.|+++++.|++++||+||+|+||+++|++... . ...+|+++++.+
T Consensus 136 ~-~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~ 214 (239)
T 2ekp_A 136 G-GPVPIPAYTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQNPELYEPITARIPMGRWARPEEIARVA 214 (239)
T ss_dssp C-TTSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHTTCTTSSCBCHHHHHHHH
T ss_pred C-CCCCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhhccccCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence 3 114577899999999999999999999999999999999999997431 0 135899999999
Q ss_pred HHHhhhcccccccceeeeCCee
Q psy11190 225 IQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 225 ~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
+.++++.....+|+.+.++|..
T Consensus 215 ~~l~s~~~~~~tG~~~~vdgG~ 236 (239)
T 2ekp_A 215 AVLCGDEAEYLTGQAVAVDGGF 236 (239)
T ss_dssp HHHTSGGGTTCCSCEEEESTTT
T ss_pred HHHcCchhcCCCCCEEEECCCc
Confidence 9999887788999999999863
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-38 Score=263.57 Aligned_cols=224 Identities=17% Similarity=0.176 Sum_probs=190.9
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||++|||+++|++|+++| ++|++++|+.++++++.+.. ..++.++++|++|.++ ++++++.+ +.++
T Consensus 31 k~vlVTGas~GIG~aia~~l~~~G----~~Vi~~~r~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~-v~~~~~~~-~~~~ 102 (281)
T 3ppi_A 31 ASAIVSGGAGGLGEATVRRLHADG----LGVVIADLAAEKGKALADEL--GNRAEFVSTNVTSEDS-VLAAIEAA-NQLG 102 (281)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHH--CTTEEEEECCTTCHHH-HHHHHHHH-TTSS
T ss_pred CEEEEECCCChHHHHHHHHHHHCC----CEEEEEeCChHHHHHHHHHh--CCceEEEEcCCCCHHH-HHHHHHHH-HHhC
Confidence 689999999999999999999999 89999999998887775444 4578999999999999 99999999 6665
Q ss_pred CCCccEEEec-cccCCccccC-----CCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeec
Q psy11190 82 DQGLNVLVNN-AGIAAKFTRL-----GLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSS 155 (248)
Q Consensus 82 ~~~iD~lv~~-ag~~~~~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss 155 (248)
++|++||| ||.... ..+ .+.+.++|++.+++|+.+++++++.+++.|.+.... ...+.|+||++||
T Consensus 103 --~id~lv~~aag~~~~-~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-----~~~~~g~iv~isS 174 (281)
T 3ppi_A 103 --RLRYAVVAHGGFGVA-QRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPR-----ENGERGALVLTAS 174 (281)
T ss_dssp --EEEEEEECCCCCCCC-CCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCC-----TTSCCEEEEEECC
T ss_pred --CCCeEEEccCccccc-ccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccc-----ccCCCeEEEEEec
Confidence 59999999 554432 332 367889999999999999999999999999863110 0115789999999
Q ss_pred CCCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC----------------CCCCchhh
Q psy11190 156 IMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS----------------NAPLEVGA 219 (248)
Q Consensus 156 ~~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~----------------~~~~~~~~ 219 (248)
.++..+. ++...|+++|+++++|+++|+.|++++||+||+|+||+++|++.+. ....+|++
T Consensus 175 ~~~~~~~---~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~ped 251 (281)
T 3ppi_A 175 IAGYEGQ---IGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESVGEEALAKFAANIPFPKRLGTPDE 251 (281)
T ss_dssp GGGTSCC---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTTCHHHHHHHHHTCCSSSSCBCHHH
T ss_pred ccccCCC---CCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhcccHHHHHHHHhcCCCCCCCCCHHH
Confidence 9998877 7889999999999999999999999999999999999999997543 22458999
Q ss_pred HHHHHHHHhhhcccccccceeeeCCee
Q psy11190 220 ATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 220 ~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
+++.++.++++ ...+|+.+.+||..
T Consensus 252 vA~~v~~l~s~--~~~tG~~i~vdGG~ 276 (281)
T 3ppi_A 252 FADAAAFLLTN--GYINGEVMRLDGAQ 276 (281)
T ss_dssp HHHHHHHHHHC--SSCCSCEEEESTTC
T ss_pred HHHHHHHHHcC--CCcCCcEEEECCCc
Confidence 99999999975 67899999999863
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-38 Score=258.14 Aligned_cols=226 Identities=26% Similarity=0.338 Sum_probs=196.7
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEe-ecCchhHHHHHH-HHhhcCCcee-EEeeccCCchhhhhHHHHhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFAT-CRNKDKAVELLA-LAQQHSNLHV-IELDVTDFSKQQDVLFKDIS 77 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~-~r~~~~~~~~~~-~~~~~~~~~~-~~~D~~~~~~~v~~~~~~i~ 77 (248)
||+++||||++|||++++++|+++| ++|+++ +|+.++++++.+ +...+.++.. +.+|++|.++ ++.+++++.
T Consensus 1 ~k~vlITGasggiG~~~a~~l~~~G----~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~ 75 (245)
T 2ph3_A 1 MRKALITGASRGIGRAIALRLAEDG----FALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEA-ATALVHQAA 75 (245)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTTT----CEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHH-HHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCC----CEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHH-HHHHHHHHH
Confidence 7899999999999999999999999 899998 899887776643 3333446666 9999999999 999999999
Q ss_pred hhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCC
Q psy11190 78 DVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIM 157 (248)
Q Consensus 78 ~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~ 157 (248)
+.++ ++|+||||||.... .++.+.+.+++++.+++|+.+++++++.++|.|.++ +.++||++||..
T Consensus 76 ~~~~--~~d~li~~Ag~~~~-~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-----------~~~~iv~~sS~~ 141 (245)
T 2ph3_A 76 EVLG--GLDTLVNNAGITRD-TLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKA-----------RFGRIVNITSVV 141 (245)
T ss_dssp HHHT--CCCEEEECCCCCCC-BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----------TCEEEEEECCTH
T ss_pred HhcC--CCCEEEECCCCCCC-CCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhc-----------CCCEEEEEeChh
Confidence 9887 59999999998754 667778999999999999999999999999999875 568999999998
Q ss_pred CcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC---------------CCCchhhHHH
Q psy11190 158 GSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN---------------APLEVGAATA 222 (248)
Q Consensus 158 ~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~---------------~~~~~~~~~~ 222 (248)
+..+. ++...|+++|++++.|++.++.++.++||++++|+||+++|++.+.. ...+|+++++
T Consensus 142 ~~~~~---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~ 218 (245)
T 2ph3_A 142 GILGN---PGQANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTERLPQEVKEAYLKQIPAGRFGRPEEVAE 218 (245)
T ss_dssp HHHCC---SSBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHHTCTTCSCBCHHHHHH
T ss_pred hccCC---CCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhcCHHHHHHHHhcCCCCCCcCHHHHHH
Confidence 87766 77889999999999999999999999999999999999999875321 1347999999
Q ss_pred HHHHHhhhcccccccceeeeCCeecC
Q psy11190 223 GIIQFIQSLGEAHNGGFFEYTGKAIK 248 (248)
Q Consensus 223 ~~~~~~~~~~~~~~g~~~~~~g~~~~ 248 (248)
.++.++++.....+|+++.++|...|
T Consensus 219 ~~~~l~~~~~~~~~G~~~~v~gg~~~ 244 (245)
T 2ph3_A 219 AVAFLVSEKAGYITGQTLCVDGGLTP 244 (245)
T ss_dssp HHHHHTSGGGTTCCSCEEEESTTCSC
T ss_pred HHHHHhCcccccccCCEEEECCCCCC
Confidence 99999987667789999999997654
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-37 Score=263.85 Aligned_cols=220 Identities=29% Similarity=0.372 Sum_probs=189.6
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHH-HHhhc-CCceeEEeeccCC-chhhhhHHHHhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQH-SNLHVIELDVTDF-SKQQDVLFKDISD 78 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~-~~~~~-~~~~~~~~D~~~~-~~~v~~~~~~i~~ 78 (248)
|++|||||++|||+++|++|+++| ++|++++|+.+++++..+ +.... .++.++++|++|. ++ ++.+++.+.+
T Consensus 13 k~vlITGas~GIG~~~a~~L~~~G----~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~-v~~~~~~~~~ 87 (311)
T 3o26_A 13 RCAVVTGGNKGIGFEICKQLSSNG----IMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIAT-MSSLADFIKT 87 (311)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHH-HHHHHHHHHH
T ss_pred cEEEEecCCchHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHH-HHHHHHHHHH
Confidence 789999999999999999999999 899999999988877744 33333 3789999999998 87 9999999999
Q ss_pred hhcCCCccEEEeccccCCc-----------------------------cccCCCCChhhhhheeeecchhhHHHHHHHhH
Q psy11190 79 VVKDQGLNVLVNNAGIAAK-----------------------------FTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLP 129 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~-----------------------------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 129 (248)
.++ ++|+||||||+... ...+.+.+.+++++.+++|+.+++++++.++|
T Consensus 88 ~~g--~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~ 165 (311)
T 3o26_A 88 HFG--KLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIP 165 (311)
T ss_dssp HHS--SCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred hCC--CCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhH
Confidence 887 59999999998632 12445668899999999999999999999999
Q ss_pred HHHhhhhcccCCCCCCCCceEEEeecCCCcccccC----------------------------------------CCCCc
Q psy11190 130 LLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNT----------------------------------------QGGFH 169 (248)
Q Consensus 130 ~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~~~~----------------------------------------~~~~~ 169 (248)
.|+++ +.++||++||.++..+... .++..
T Consensus 166 ~l~~~-----------~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (311)
T 3o26_A 166 LLQLS-----------DSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGA 234 (311)
T ss_dssp HHTTS-----------SSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCH
T ss_pred hhccC-----------CCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccch
Confidence 99875 5789999999998765310 02456
Q ss_pred cchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCCCCchhhHHHHHHHHhhhcccccccceee
Q psy11190 170 PYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQSLGEAHNGGFFE 241 (248)
Q Consensus 170 ~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 241 (248)
.|++||+++++|+++|+.++.+ |+||+|+||+|+|+|.+.....++++.++.++..+..+....+|.++.
T Consensus 235 ~Y~~SK~a~~~~~~~la~e~~~--i~v~~v~PG~v~T~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~ 304 (311)
T 3o26_A 235 AYTTSKACLNAYTRVLANKIPK--FQVNCVCPGLVKTEMNYGIGNYTAEEGAEHVVRIALFPDDGPSGFFYD 304 (311)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTT--SEEEEECCCSBCSGGGTTCCSBCHHHHHHHHHHHHTCCSSCCCSCEET
T ss_pred hhHHHHHHHHHHHHHHHhhcCC--ceEEEecCCceecCCcCCCCCCCHHHHHHHHHHHHhCCCCCCCceEec
Confidence 8999999999999999999864 999999999999999998888999999999999988777777787775
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-38 Score=261.59 Aligned_cols=221 Identities=19% Similarity=0.281 Sum_probs=187.9
Q ss_pred ceEEEecCCCchhHHHHHHHHh---CCCCCCceEEEeecCchhHHHHHHHHhh---cCCceeEEeeccCCchhhhhHHHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVG---LGNNQPAHIFATCRNKDKAVELLALAQQ---HSNLHVIELDVTDFSKQQDVLFKD 75 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~---~g~~~~~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~v~~~~~~ 75 (248)
|++|||||++|||++++++|++ +| ++|++++|+.++++++.+.+.. +.++.++++|++|.++ ++.+++.
T Consensus 7 k~~lVTGas~gIG~~ia~~l~~~~~~G----~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~-v~~~~~~ 81 (259)
T 1oaa_A 7 AVCVLTGASRGFGRALAPQLARLLSPG----SVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAG-VQRLLSA 81 (259)
T ss_dssp EEEEESSCSSHHHHHHHHHHHTTBCTT----CEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHH-HHHHHHH
T ss_pred cEEEEeCCCChHHHHHHHHHHHhhcCC----CeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHH-HHHHHHH
Confidence 7899999999999999999999 88 8999999999888777443332 3468899999999999 9999999
Q ss_pred hhh--hhcCCCcc--EEEeccccCCcc-ccCCC-CChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCce
Q psy11190 76 ISD--VVKDQGLN--VLVNNAGIAAKF-TRLGL-LKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAA 149 (248)
Q Consensus 76 i~~--~~~~~~iD--~lv~~ag~~~~~-~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~ 149 (248)
+.+ .++ ++| +||||||..... .++.+ .+.++|++.+++|+.+++++++.++|.|.++.. +.|+
T Consensus 82 ~~~~~~~g--~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~---------~~g~ 150 (259)
T 1oaa_A 82 VRELPRPE--GLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPG---------LSKT 150 (259)
T ss_dssp HHHSCCCT--TCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTT---------CEEE
T ss_pred HHhccccc--cCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC---------CCce
Confidence 987 444 478 999999986431 34555 688999999999999999999999999976310 2589
Q ss_pred EEEeecCCCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC------------------
Q psy11190 150 IVNVSSIMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS------------------ 211 (248)
Q Consensus 150 iv~vss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~------------------ 211 (248)
||++||.++..+. ++...|+++|+++++|+++++.|+++ |+||+|+||+++|+|.+.
T Consensus 151 iv~isS~~~~~~~---~~~~~Y~asKaa~~~~~~~la~e~~~--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~ 225 (259)
T 1oaa_A 151 VVNISSLCALQPY---KGWGLYCAGKAARDMLYQVLAAEEPS--VRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLK 225 (259)
T ss_dssp EEEECCGGGTSCC---TTCHHHHHHHHHHHHHHHHHHHHCTT--EEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHH
T ss_pred EEEEcCchhcCCC---CCccHHHHHHHHHHHHHHHHHhhCCC--ceEEEecCCCcCcchHHHHhhccCChhHHHHHHHhh
Confidence 9999999998776 78889999999999999999999974 999999999999997432
Q ss_pred --CCCCchhhHHHHHHHHhhhcccccccceeeeCC
Q psy11190 212 --NAPLEVGAATAGIIQFIQSLGEAHNGGFFEYTG 244 (248)
Q Consensus 212 --~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g 244 (248)
....+|+++++.+++++++ ....+|+++.++|
T Consensus 226 p~~~~~~p~dvA~~v~~l~~~-~~~itG~~i~vdg 259 (259)
T 1oaa_A 226 SDGALVDCGTSAQKLLGLLQK-DTFQSGAHVDFYD 259 (259)
T ss_dssp HTTCSBCHHHHHHHHHHHHHH-CCSCTTEEEETTC
T ss_pred hcCCcCCHHHHHHHHHHHHhh-ccccCCcEEeccC
Confidence 1256899999999999986 6778999999886
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-37 Score=258.95 Aligned_cols=212 Identities=21% Similarity=0.262 Sum_probs=190.6
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||++|||++++++|+++| ++|++++|+.++ ..++.++++|++|.++ ++.+++++.+.++
T Consensus 9 k~vlVTGas~gIG~~ia~~l~~~G----~~V~~~~r~~~~----------~~~~~~~~~Dl~~~~~-v~~~~~~~~~~~g 73 (264)
T 2dtx_A 9 KVVIVTGASMGIGRAIAERFVDEG----SKVIDLSIHDPG----------EAKYDHIECDVTNPDQ-VKASIDHIFKEYG 73 (264)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTT----CEEEEEESSCCC----------SCSSEEEECCTTCHHH-HHHHHHHHHHHHS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC----CEEEEEecCccc----------CCceEEEEecCCCHHH-HHHHHHHHHHHcC
Confidence 789999999999999999999999 899999998765 3578899999999999 9999999999987
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|.++ +.++||++||.++..+
T Consensus 74 --~iD~lv~~Ag~~~~-~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-----------~~g~iv~isS~~~~~~ 139 (264)
T 2dtx_A 74 --SISVLVNNAGIESY-GKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRS-----------RDPSIVNISSVQASII 139 (264)
T ss_dssp --CCCEEEECCCCCCC-BCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTS-----------SSCEEEEECCGGGTSC
T ss_pred --CCCEEEECCCCCCC-CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----------CCcEEEEECCchhccC
Confidence 59999999998765 778888999999999999999999999999999875 5789999999998877
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC--------------------------CCCC
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS--------------------------NAPL 215 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~--------------------------~~~~ 215 (248)
. ++...|+++|++++.|+++++.|++++ |+||+|+||+++|++... ....
T Consensus 140 ~---~~~~~Y~~sK~a~~~~~~~la~e~~~~-i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 215 (264)
T 2dtx_A 140 T---KNASAYVTSKHAVIGLTKSIALDYAPL-LRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIG 215 (264)
T ss_dssp C---TTBHHHHHHHHHHHHHHHHHHHHHTTT-SEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHHHHHHSTTSSCB
T ss_pred C---CCchhHHHHHHHHHHHHHHHHHHhcCC-cEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHHHHhcCCCCCCc
Confidence 6 778899999999999999999999988 999999999999987421 1135
Q ss_pred chhhHHHHHHHHhhhcccccccceeeeCCee
Q psy11190 216 EVGAATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
+|+++++.++.++++.....+|+.+.++|..
T Consensus 216 ~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~ 246 (264)
T 2dtx_A 216 KPQEVASAVAFLASREASFITGTCLYVDGGL 246 (264)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred CHHHHHHHHHHHhCchhcCCCCcEEEECCCc
Confidence 7999999999999887788999999999863
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-37 Score=253.31 Aligned_cols=218 Identities=22% Similarity=0.268 Sum_probs=183.4
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|+++||||++|||++++++|+++| ++|++++|+.++++++.+.. .++.++++|++|.++ ++++++.+.+.++
T Consensus 6 k~vlVtGasggiG~~~a~~l~~~G----~~V~~~~r~~~~~~~~~~~~---~~~~~~~~D~~~~~~-~~~~~~~~~~~~~ 77 (234)
T 2ehd_A 6 GAVLITGASRGIGEATARLLHAKG----YRVGLMARDEKRLQALAAEL---EGALPLPGDVREEGD-WARAVAAMEEAFG 77 (234)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHS---TTCEEEECCTTCHHH-HHHHHHHHHHHHS
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHHh---hhceEEEecCCCHHH-HHHHHHHHHHHcC
Confidence 689999999999999999999999 89999999987766654332 378899999999999 9999999999887
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|+++ +.++||++||..+..+
T Consensus 78 --~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-----------~~~~iv~isS~~~~~~ 143 (234)
T 2ehd_A 78 --ELSALVNNAGVGVM-KPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRR-----------GGGTIVNVGSLAGKNP 143 (234)
T ss_dssp --CCCEEEECCCCCCC-SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT-----------TCEEEEEECCTTTTSC
T ss_pred --CCCEEEECCCcCCC-CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-----------CCcEEEEECCchhcCC
Confidence 59999999998754 667778999999999999999999999999999875 5789999999998876
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC----CCchhhHHHHHHHHhhhccccccc
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA----PLEVGAATAGIIQFIQSLGEAHNG 237 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~g 237 (248)
. ++...|+++|++++.|++.++.+++++||++++|+||+++|++..... +.+|+++++.++.++++.....+|
T Consensus 144 ~---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~~~g 220 (234)
T 2ehd_A 144 F---KGGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAGNTPGQAWKLKPEDVAQAVLFALEMPGHAMVS 220 (234)
T ss_dssp C---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEECC----------------CCHHHHHHHHHHHHHSCCSSCCC
T ss_pred C---CCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCcccccccccCCCCHHHHHHHHHHHhCCCcccccc
Confidence 6 778899999999999999999999999999999999999999865432 578999999999999987778888
Q ss_pred ceeeeCC
Q psy11190 238 GFFEYTG 244 (248)
Q Consensus 238 ~~~~~~g 244 (248)
+++-..+
T Consensus 221 ~~~~~~~ 227 (234)
T 2ehd_A 221 EIELRPT 227 (234)
T ss_dssp EEECCC-
T ss_pred eEEEeec
Confidence 8765444
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-37 Score=257.47 Aligned_cols=223 Identities=23% Similarity=0.295 Sum_probs=179.8
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHH-HHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|++|||||++|||++++++|+++| ++|++++|+.++++++.+ +...+.++.++.+|+++.++ ++.+++++.+.+
T Consensus 15 k~vlITGasggiG~~la~~l~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~~ 89 (266)
T 1xq1_A 15 KTVLVTGGTKGIGHAIVEEFAGFG----AVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPE-REKLMQTVSSMF 89 (266)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHH-HHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHH-HHHHHHHHHHHh
Confidence 789999999999999999999999 899999999887777643 33334578899999999999 999999999888
Q ss_pred -cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 81 -KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 81 -~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
+ ++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|+++ +.++||++||..+.
T Consensus 90 ~~--~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-----------~~~~iv~isS~~~~ 155 (266)
T 1xq1_A 90 GG--KLDILINNLGAIRS-KPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKAS-----------GCGNIIFMSSIAGV 155 (266)
T ss_dssp TT--CCSEEEEECCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------SSCEEEEEC-----
T ss_pred CC--CCcEEEECCCCCCC-CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----------CCcEEEEEccchhc
Confidence 5 59999999998754 677788999999999999999999999999999875 57899999999988
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC----------------CCCchhhHHHH
Q psy11190 160 IEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN----------------APLEVGAATAG 223 (248)
Q Consensus 160 ~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~----------------~~~~~~~~~~~ 223 (248)
.+. ++...|+++|++++.|+++++.+++++||++++|+||+++|++.+.. ...+|+++++.
T Consensus 156 ~~~---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~ 232 (266)
T 1xq1_A 156 VSA---SVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFKKVVISRKPLGRFGEPEEVSSL 232 (266)
T ss_dssp --------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC-------------------------CCGGGGHHH
T ss_pred cCC---CCCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhcCHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence 766 77889999999999999999999999999999999999999985431 12479999999
Q ss_pred HHHHhhhcccccccceeeeCCee
Q psy11190 224 IIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 224 ~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
++.++++.....+|+.+.++|..
T Consensus 233 ~~~l~~~~~~~~~G~~~~v~gG~ 255 (266)
T 1xq1_A 233 VAFLCMPAASYITGQTICVDGGL 255 (266)
T ss_dssp HHHHTSGGGTTCCSCEEECCCCE
T ss_pred HHHHcCccccCccCcEEEEcCCc
Confidence 99999887778899999998863
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-37 Score=260.52 Aligned_cols=223 Identities=23% Similarity=0.291 Sum_probs=193.8
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHh-hcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQ-QHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|++|||||++|||++++++|+++| ++|++++|+.++++++.+... .+.++.++.+|++|.++ ++.+++++.+.+
T Consensus 45 k~vlITGasggIG~~la~~L~~~G----~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~-v~~~~~~~~~~~ 119 (285)
T 2c07_A 45 KVALVTGAGRGIGREIAKMLAKSV----SHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEE-ISEVINKILTEH 119 (285)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTTS----SEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHH-HHHHHHHHHHHC
T ss_pred CEEEEECCCcHHHHHHHHHHHHcC----CEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHH-HHHHHHHHHHhc
Confidence 789999999999999999999999 899999999888777644333 34578899999999999 999999999888
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+ ++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|.++ +.++||++||..+..
T Consensus 120 ~--~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-----------~~~~iv~isS~~~~~ 185 (285)
T 2c07_A 120 K--NVDILVNNAGITRD-NLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINN-----------RYGRIINISSIVGLT 185 (285)
T ss_dssp S--CCCEEEECCCCCCC-CCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHH-----------TCEEEEEECCTHHHH
T ss_pred C--CCCEEEECCCCCCC-CchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-----------CCCEEEEECChhhcc
Confidence 7 59999999998764 677888999999999999999999999999999875 568999999998877
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC---------------CCchhhHHHHHH
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA---------------PLEVGAATAGII 225 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~---------------~~~~~~~~~~~~ 225 (248)
+. ++...|+++|++++.|+++++.++.++||+|++|.||+++|++..... ..+|+++++.++
T Consensus 186 ~~---~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~ 262 (285)
T 2c07_A 186 GN---VGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQIKKNIISNIPAGRMGTPEEVANLAC 262 (285)
T ss_dssp CC---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHHHHHHHHTTCTTSSCBCHHHHHHHHH
T ss_pred CC---CCCchHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhcCHHHHHHHHhhCCCCCCCCHHHHHHHHH
Confidence 76 778899999999999999999999999999999999999999865321 357999999999
Q ss_pred HHhhhcccccccceeeeCCee
Q psy11190 226 QFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 226 ~~~~~~~~~~~g~~~~~~g~~ 246 (248)
.++++.....+|+.+.++|..
T Consensus 263 ~l~~~~~~~~~G~~i~v~gG~ 283 (285)
T 2c07_A 263 FLSSDKSGYINGRVFVIDGGL 283 (285)
T ss_dssp HHHSGGGTTCCSCEEEESTTS
T ss_pred HHhCCCcCCCCCCEEEeCCCc
Confidence 999887778899999999863
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-37 Score=254.68 Aligned_cols=224 Identities=17% Similarity=0.241 Sum_probs=196.0
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHH-HHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|++|||||++|||++++++|+++| ++|++++|+.++++++.+ +...+.++.++++|++|.++ ++.+++++.+.+
T Consensus 14 k~vlItGasggiG~~la~~l~~~G----~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~~ 88 (260)
T 3awd_A 14 RVAIVTGGAQNIGLACVTALAEAG----ARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTES-VQNAVRSVHEQE 88 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH-HHHHHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHH-HHHHHHHHHHHc
Confidence 789999999999999999999999 899999999887776643 33335578999999999999 999999999988
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+ ++|+||||||...+..++.+.+.++|++.+++|+.+++++++.++|.|.++ +.++||++||..+..
T Consensus 89 ~--~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----------~~~~iv~~sS~~~~~ 155 (260)
T 3awd_A 89 G--RVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQ-----------KQGVIVAIGSMSGLI 155 (260)
T ss_dssp S--CCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----------TCEEEEEECCGGGTS
T ss_pred C--CCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhc-----------CCCEEEEEecchhcc
Confidence 7 599999999987633677788999999999999999999999999999875 578999999998876
Q ss_pred cccCCCCC--ccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCC-C----------------CCCCchhhHH
Q psy11190 161 EDNTQGGF--HPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGG-S----------------NAPLEVGAAT 221 (248)
Q Consensus 161 ~~~~~~~~--~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~-~----------------~~~~~~~~~~ 221 (248)
+. ++. ..|+++|++++.|++.++.+++++||++++|+||+++|++.+ . ....+|++++
T Consensus 156 ~~---~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva 232 (260)
T 3awd_A 156 VN---RPQQQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEKPELYDAWIAGTPMGRVGQPDEVA 232 (260)
T ss_dssp CC---SSSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHTCHHHHHHHHHTCTTSSCBCHHHHH
T ss_pred cC---CCCCccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccCChHHHHHHHhcCCcCCCCCHHHHH
Confidence 65 444 789999999999999999999999999999999999999875 1 0135799999
Q ss_pred HHHHHHhhhcccccccceeeeCCee
Q psy11190 222 AGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 222 ~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
+.++.++++.....+|+.+.++|..
T Consensus 233 ~~~~~l~~~~~~~~~G~~~~v~gg~ 257 (260)
T 3awd_A 233 SVVQFLASDAASLMTGAIVNVDAGF 257 (260)
T ss_dssp HHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred HHHHHHhCchhccCCCcEEEECCce
Confidence 9999999887778899999999863
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-38 Score=264.28 Aligned_cols=220 Identities=14% Similarity=0.179 Sum_probs=188.1
Q ss_pred ceEEEecC--CCchhHHHHHHHHhCCCCCCceEEEeecCchhH-HHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 2 KSILITGC--NRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKA-VELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 2 k~~lVtGa--s~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
|++||||| ++|||++++++|+++| ++|++++|+.++. +++.+.. ..++.++++|++|.++ ++++++++.+
T Consensus 8 k~vlVTGa~~s~gIG~aia~~l~~~G----~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~-v~~~~~~~~~ 80 (269)
T 2h7i_A 8 KRILVSGIITDSSIAFHIARVAQEQG----AQLVLTGFDRLRLIQRITDRL--PAKAPLLELDVQNEEH-LASLAGRVTE 80 (269)
T ss_dssp CEEEECCCSSTTSHHHHHHHHHHHTT----CEEEEEECSCHHHHHHHHTTS--SSCCCEEECCTTCHHH-HHHHHHHHHH
T ss_pred CEEEEECCCCCCchHHHHHHHHHHCC----CEEEEEecChHHHHHHHHHhc--CCCceEEEccCCCHHH-HHHHHHHHHH
Confidence 68999999 9999999999999999 8999999987652 4333222 3468899999999999 9999999999
Q ss_pred hhcC-CCccEEEeccccCCc----cccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEe
Q psy11190 79 VVKD-QGLNVLVNNAGIAAK----FTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNV 153 (248)
Q Consensus 79 ~~~~-~~iD~lv~~ag~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~v 153 (248)
.++. .++|+||||||...+ ..++.+.+.++|++.+++|+.+++++++.++|.|.+ .|+||++
T Consensus 81 ~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-------------~g~iv~i 147 (269)
T 2h7i_A 81 AIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP-------------GGSIVGM 147 (269)
T ss_dssp HHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE-------------EEEEEEE
T ss_pred HhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc-------------CCeEEEE
Confidence 8861 139999999998752 256677899999999999999999999999999854 4799999
Q ss_pred ecCCCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCC-----------------------
Q psy11190 154 SSIMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGG----------------------- 210 (248)
Q Consensus 154 ss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~----------------------- 210 (248)
||..+ .+. +.+..|+++|+++++|+++++.|++++||+||+|+||+++|+|.+
T Consensus 148 ss~~~-~~~---~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (269)
T 2h7i_A 148 DFDPS-RAM---PAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWD 223 (269)
T ss_dssp ECCCS-SCC---TTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHH
T ss_pred cCccc-ccc---CchHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHhhh
Confidence 99775 343 677899999999999999999999999999999999999998632
Q ss_pred ---CC--CCCchhhHHHHHHHHhhhcccccccceeeeCCe
Q psy11190 211 ---SN--APLEVGAATAGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 211 ---~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
+. ...+|+|+++.+++++++.....+|+.+.+||.
T Consensus 224 ~~~p~~rr~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG 263 (269)
T 2h7i_A 224 QRAPIGWNMKDATPVAKTVCALLSDWLPATTGDIIYADGG 263 (269)
T ss_dssp HHCTTCCCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTT
T ss_pred ccCCcccCCCCHHHHHHHHHHHhCchhccCcceEEEecCC
Confidence 11 135799999999999998888999999999986
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-37 Score=265.38 Aligned_cols=215 Identities=20% Similarity=0.269 Sum_probs=182.2
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHH-hhcC--CceeEEeeccCCchhhhhHHHHhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALA-QQHS--NLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~-~~~~--~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
|++|||||+||||+++|++|+++| ++|++++|+.++++++.+.+ ..+. ++.++++|++|.++ ++.+++.+.+
T Consensus 9 k~vlVTGas~gIG~~la~~l~~~G----~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~-v~~~~~~~~~ 83 (319)
T 3ioy_A 9 RTAFVTGGANGVGIGLVRQLLNQG----CKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREG-FKMAADEVEA 83 (319)
T ss_dssp CEEEEETTTSTHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHH-HHHHHHHHHH
T ss_pred CEEEEcCCchHHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHH-HHHHHHHHHH
Confidence 689999999999999999999999 89999999999888774433 3333 78899999999999 9999999999
Q ss_pred hhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 79 VVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
.++ ++|+||||||+... .++.+.+.+++++.+++|+.|++++++.++|.|.++..... .+.|+||++||.++
T Consensus 84 ~~g--~id~lv~nAg~~~~-~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~-----~~~g~iV~isS~a~ 155 (319)
T 3ioy_A 84 RFG--PVSILCNNAGVNLF-QPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGE-----QKGGHVVNTASMAA 155 (319)
T ss_dssp HTC--CEEEEEECCCCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTS-----CCCCEEEEECCGGG
T ss_pred hCC--CCCEEEECCCcCCC-CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccC-----CCCcEEEEeccccc
Confidence 887 59999999998765 77888899999999999999999999999999987411100 14789999999999
Q ss_pred cccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC-------------------------
Q psy11190 159 SIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA------------------------- 213 (248)
Q Consensus 159 ~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~------------------------- 213 (248)
..+. +++..|++||+++++|+++++.|+.++||+|++|+||+|+|++.....
T Consensus 156 ~~~~---~~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (319)
T 3ioy_A 156 FLAA---GSPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLAGVH 232 (319)
T ss_dssp TCCC---SSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-----------------------------CCGG
T ss_pred ccCC---CCCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCchhhcccccchhHHHHHHHHHhh
Confidence 9877 788899999999999999999999999999999999999999865321
Q ss_pred --CCchhhHHHHHHHHhhhcc
Q psy11190 214 --PLEVGAATAGIIQFIQSLG 232 (248)
Q Consensus 214 --~~~~~~~~~~~~~~~~~~~ 232 (248)
..+|+++++.++..+....
T Consensus 233 ~~~~~pe~vA~~~~~al~~~~ 253 (319)
T 3ioy_A 233 EFGMEPDVIGARVIEAMKANR 253 (319)
T ss_dssp GSSBCHHHHHHHHHHHHHTTC
T ss_pred hcCCCHHHHHHHHHHHHHcCC
Confidence 1689999999999887743
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-37 Score=255.38 Aligned_cols=222 Identities=23% Similarity=0.306 Sum_probs=194.9
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||++|||++++++|+++| ++|++++|+.+.++++.+......++.++++|++|.++ ++.+++.+.+.++
T Consensus 7 k~vlVtGasggiG~~~a~~l~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~~~ 81 (251)
T 1zk4_A 7 KVAIITGGTLGIGLAIATKFVEEG----AKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDG-WTKLFDATEKAFG 81 (251)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHH-HHHHHHHHHHHHS
T ss_pred cEEEEeCCCChHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHH-HHHHHHHHHHHhC
Confidence 789999999999999999999999 89999999988777664444333578899999999999 9999999999887
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCC-ceEEEeecCCCcc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSR-AAIVNVSSIMGSI 160 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~-~~iv~vss~~~~~ 160 (248)
++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|.++ +. ++||++||..+..
T Consensus 82 --~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-----------~~~~~iv~isS~~~~~ 147 (251)
T 1zk4_A 82 --PVSTLVNNAGIAVN-KSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNK-----------GLGASIINMSSIEGFV 147 (251)
T ss_dssp --SCCEEEECCCCCCC-CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTS-----------SSCEEEEEECCGGGTS
T ss_pred --CCCEEEECCCCCCC-CChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc-----------CCCCEEEEeCCchhcc
Confidence 59999999998754 677788999999999999999999999999999875 34 8999999999887
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhcc--CCCeEEEEecCcceecCCCCCC----------------CCCchhhHHH
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLK--GDKIIATAMHPGWVKTDMGGSN----------------APLEVGAATA 222 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~--~~~i~v~~v~PG~v~t~~~~~~----------------~~~~~~~~~~ 222 (248)
+. ++...|+++|++++.|+++++.|+. ++||++++|+||+++|++.+.. ...+|+++++
T Consensus 148 ~~---~~~~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~ 224 (251)
T 1zk4_A 148 GD---PSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIAY 224 (251)
T ss_dssp CC---TTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHHHHHTSTTTCTTSSCBCHHHHHH
T ss_pred CC---CCCccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhcCchhhhHHHhhcCCCCCCcCHHHHHH
Confidence 76 7788999999999999999999998 8899999999999999864321 1347999999
Q ss_pred HHHHHhhhcccccccceeeeCCe
Q psy11190 223 GIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 223 ~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
.++.++++.....+|+.+.++|.
T Consensus 225 ~~~~l~~~~~~~~~G~~~~v~gG 247 (251)
T 1zk4_A 225 ICVYLASNESKFATGSEFVVDGG 247 (251)
T ss_dssp HHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHHcCcccccccCcEEEECCC
Confidence 99999988777789999999986
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-37 Score=258.88 Aligned_cols=207 Identities=29% Similarity=0.409 Sum_probs=185.8
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
+|++|||||++|||+++|++|+++| ++|++++|+.++++++.+.. ..++.++++|++|.++ ++.+++++.+.+
T Consensus 5 ~k~vlVTGas~gIG~~~a~~l~~~G----~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~-~~~~~~~~~~~~ 77 (281)
T 3m1a_A 5 AKVWLVTGASSGFGRAIAEAAVAAG----DTVIGTARRTEALDDLVAAY--PDRAEAISLDVTDGER-IDVVAADVLARY 77 (281)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHHTT----CEEEEEESSGGGGHHHHHHC--TTTEEEEECCTTCHHH-HHHHHHHHHHHH
T ss_pred CcEEEEECCCChHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHhc--cCCceEEEeeCCCHHH-HHHHHHHHHHhC
Confidence 4799999999999999999999999 89999999998877764432 4578999999999999 999999999998
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+ ++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|+++ +.++||++||..+..
T Consensus 78 g--~id~lv~~Ag~~~~-~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----------~~~~iv~~sS~~~~~ 143 (281)
T 3m1a_A 78 G--RVDVLVNNAGRTQV-GAFEETTERELRDLFELHVFGPARLTRALLPQMRER-----------GSGSVVNISSFGGQL 143 (281)
T ss_dssp S--CCSEEEECCCCEEE-CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----------TCEEEEEECCGGGTC
T ss_pred C--CCCEEEECCCcCCC-CChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----------CCCEEEEEcCccccC
Confidence 8 59999999998765 778888999999999999999999999999999886 578999999999988
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC---------------------------
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA--------------------------- 213 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~--------------------------- 213 (248)
+. ++...|+++|++++.|+++++.|++++||+|++|+||+++|++.....
T Consensus 144 ~~---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (281)
T 3m1a_A 144 SF---AGFSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQGSDGS 220 (281)
T ss_dssp CC---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHHHC----
T ss_pred CC---CCchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHHhhccCC
Confidence 76 788999999999999999999999999999999999999999864321
Q ss_pred -CCchhhHHHHHHHHhhhc
Q psy11190 214 -PLEVGAATAGIIQFIQSL 231 (248)
Q Consensus 214 -~~~~~~~~~~~~~~~~~~ 231 (248)
..+|+++++.++.++...
T Consensus 221 ~~~~~~dva~a~~~~~~~~ 239 (281)
T 3m1a_A 221 QPGDPAKAAAAIRLALDTE 239 (281)
T ss_dssp -CBCHHHHHHHHHHHHHSS
T ss_pred CCCCHHHHHHHHHHHHhCC
Confidence 357899999999988774
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-37 Score=255.56 Aligned_cols=223 Identities=18% Similarity=0.178 Sum_probs=195.1
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||++|||++++++|+++| ++|++++|+.+..+++.+......++.++++|++|.++ ++.+++++.+.++
T Consensus 17 k~vlITGasggiG~~~a~~l~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~~~ 91 (278)
T 2bgk_A 17 KVAIITGGAGGIGETTAKLFVRYG----AKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDED-VRNLVDTTIAKHG 91 (278)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHH-HHHHHHHHHHHHS
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC----CEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHH-HHHHHHHHHHHcC
Confidence 789999999999999999999999 89999999987766664443333478899999999999 9999999999887
Q ss_pred CCCccEEEeccccCCc-cccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 82 DQGLNVLVNNAGIAAK-FTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
++|+||||||.... ..++.+.+.++|++.+++|+.+++++++.++|.|.++ +.++||++||..+..
T Consensus 92 --~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----------~~~~iv~isS~~~~~ 158 (278)
T 2bgk_A 92 --KLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPA-----------KKGSIVFTASISSFT 158 (278)
T ss_dssp --CCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGG-----------TCEEEEEECCGGGTC
T ss_pred --CCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc-----------CCCeEEEEeeccccC
Confidence 59999999997643 2466778899999999999999999999999999875 578999999999887
Q ss_pred cccCCC-CCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC--------------------CCCchhh
Q psy11190 161 EDNTQG-GFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN--------------------APLEVGA 219 (248)
Q Consensus 161 ~~~~~~-~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~--------------------~~~~~~~ 219 (248)
+. + +...|+++|++++.|++.++.|++++||++++|+||+++|++.... ...+|++
T Consensus 159 ~~---~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 235 (278)
T 2bgk_A 159 AG---EGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAED 235 (278)
T ss_dssp CC---TTSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHH
T ss_pred CC---CCCCcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHhhhcccccccccCCHHH
Confidence 65 5 6778999999999999999999999999999999999999986532 1358999
Q ss_pred HHHHHHHHhhhcccccccceeeeCCe
Q psy11190 220 ATAGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 220 ~~~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
+++.++.++++.....+|+.+.++|.
T Consensus 236 va~~~~~l~~~~~~~~~G~~~~v~gg 261 (278)
T 2bgk_A 236 VADAVAYLAGDESKYVSGLNLVIDGG 261 (278)
T ss_dssp HHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHHHHHcCcccccCCCCEEEECCc
Confidence 99999999988777889999999885
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-38 Score=259.16 Aligned_cols=214 Identities=23% Similarity=0.248 Sum_probs=184.7
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||++|||++++++|+++| ++|++++|+.++++++. ...++.++++|++|.++ ++. +.+.++
T Consensus 7 k~vlVTGas~gIG~~ia~~l~~~G----~~V~~~~r~~~~~~~~~----~~~~~~~~~~D~~~~~~-~~~----~~~~~~ 73 (246)
T 2ag5_A 7 KVIILTAAAQGIGQAAALAFAREG----AKVIATDINESKLQELE----KYPGIQTRVLDVTKKKQ-IDQ----FANEVE 73 (246)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTT----CEEEEEESCHHHHGGGG----GSTTEEEEECCTTCHHH-HHH----HHHHCS
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC----CEEEEEECCHHHHHHHH----hccCceEEEeeCCCHHH-HHH----HHHHhC
Confidence 789999999999999999999999 89999999976654432 12368889999999888 663 334444
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|.++ +.++||++||..+..+
T Consensus 74 --~id~lv~~Ag~~~~-~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-----------~~g~iv~isS~~~~~~ 139 (246)
T 2ag5_A 74 --RLDVLFNVAGFVHH-GTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQ-----------KSGNIINMSSVASSVK 139 (246)
T ss_dssp --CCSEEEECCCCCCC-BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----------TCEEEEEECCSBTTTB
T ss_pred --CCCEEEECCccCCC-CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----------CCceEEEEechHhCcC
Confidence 59999999998765 677788999999999999999999999999999876 5789999999998876
Q ss_pred ccCCC-CCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC---------------------CCCCchhh
Q psy11190 162 DNTQG-GFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS---------------------NAPLEVGA 219 (248)
Q Consensus 162 ~~~~~-~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~---------------------~~~~~~~~ 219 (248)
. + +...|+++|++++.|+++++.|++++||+||+|+||+++|++... ....+|++
T Consensus 140 ~---~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 216 (246)
T 2ag5_A 140 G---VVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEE 216 (246)
T ss_dssp C---CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHH
T ss_pred C---CCCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhcCCCCCCCCHHH
Confidence 5 5 778999999999999999999999999999999999999986321 01357999
Q ss_pred HHHHHHHHhhhcccccccceeeeCCe
Q psy11190 220 ATAGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 220 ~~~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
+++.+++++++.....+|+.+.++|.
T Consensus 217 vA~~v~~l~s~~~~~~tG~~i~vdgG 242 (246)
T 2ag5_A 217 IAMLCVYLASDESAYVTGNPVIIDGG 242 (246)
T ss_dssp HHHHHHHHHSGGGTTCCSCEEEECTT
T ss_pred HHHHHHHHhCccccCCCCCEEEECCC
Confidence 99999999988888899999999986
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-38 Score=261.83 Aligned_cols=214 Identities=12% Similarity=0.096 Sum_probs=187.2
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
+|++|||||++|||++++++|+++| ++|++++|+.++.. ....++++|++|.++ ++++++++.+.+
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G----~~V~~~~r~~~~~~---------~~~~~~~~D~~~~~~-v~~~~~~~~~~~ 72 (241)
T 1dhr_A 7 ARRVLVYGGRGALGSRCVQAFRARN----WWVASIDVVENEEA---------SASVIVKMTDSFTEQ-ADQVTAEVGKLL 72 (241)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTT----CEEEEEESSCCTTS---------SEEEECCCCSCHHHH-HHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCC----CEEEEEeCChhhcc---------CCcEEEEcCCCCHHH-HHHHHHHHHHHh
Confidence 3789999999999999999999999 89999999976532 135678999999999 999999999988
Q ss_pred cCCCccEEEeccccCCccccC-CCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRL-GLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
+.+++|+||||||.... .++ .+.+.++|++.+++|+.+++++++.++|.|++ .|+||++||..+.
T Consensus 73 ~~g~iD~lv~~Ag~~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~-------------~g~iv~isS~~~~ 138 (241)
T 1dhr_A 73 GDQKVDAILCVAGGWAG-GNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE-------------GGLLTLAGAKAAL 138 (241)
T ss_dssp TTCCEEEEEECCCCCCC-BCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE-------------EEEEEEECCGGGG
T ss_pred CCCCCCEEEEcccccCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc-------------CCEEEEECCHHHc
Confidence 21259999999998765 566 67788999999999999999999999999854 4799999999988
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHhhcc--CCCeEEEEecCcceecCCCCCC-------CCCchhhHHHHHHHHhhh
Q psy11190 160 IEDNTQGGFHPYRCSKAALNAATRSLSIDLK--GDKIIATAMHPGWVKTDMGGSN-------APLEVGAATAGIIQFIQS 230 (248)
Q Consensus 160 ~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~--~~~i~v~~v~PG~v~t~~~~~~-------~~~~~~~~~~~~~~~~~~ 230 (248)
.+. ++...|+++|++++.|+++++.|++ ++||+||+|+||+++|+|.... ...+|+++++.++.+++.
T Consensus 139 ~~~---~~~~~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~vA~~v~~l~~~ 215 (241)
T 1dhr_A 139 DGT---PGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPEADFSSWTPLEFLVETFHDWITG 215 (241)
T ss_dssp SCC---TTBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHSTTSCGGGSEEHHHHHHHHHHHHTT
T ss_pred cCC---CCchHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCccccccCcchhhccCCCHHHHHHHHHHHhcC
Confidence 776 7788999999999999999999999 8999999999999999985421 135789999999999988
Q ss_pred cccccccceeeeCCe
Q psy11190 231 LGEAHNGGFFEYTGK 245 (248)
Q Consensus 231 ~~~~~~g~~~~~~g~ 245 (248)
.....+|+++.++|.
T Consensus 216 ~~~~~~G~~~~v~g~ 230 (241)
T 1dhr_A 216 NKRPNSGSLIQVVTT 230 (241)
T ss_dssp TTCCCTTCEEEEEEE
T ss_pred CCcCccceEEEEeCC
Confidence 888899999998875
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-37 Score=254.16 Aligned_cols=223 Identities=20% Similarity=0.225 Sum_probs=194.1
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeec-CchhHHHHHH-HHhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCR-NKDKAVELLA-LAQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r-~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|++|||||++|||++++++|+++| ++|++++| +.++++++.+ +...+.++.++++|++|.++ ++++++++.+.
T Consensus 8 k~vlITGasggiG~~~a~~l~~~G----~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~ 82 (261)
T 1gee_A 8 KVVVITGSSTGLGKSMAIRFATEK----AKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESD-VINLVQSAIKE 82 (261)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTT----CEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHH-HHHHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCC----CEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHH-HHHHHHHHHHH
Confidence 689999999999999999999999 89999999 7766666643 33334568899999999999 99999999988
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
++ ++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|.+++ ..++||++||..+.
T Consensus 83 ~g--~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~----------~~~~iv~isS~~~~ 149 (261)
T 1gee_A 83 FG--KLDVMINNAGLENP-VSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVEND----------IKGTVINMSSVHEK 149 (261)
T ss_dssp HS--CCCEEEECCCCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT----------CCCEEEEECCGGGT
T ss_pred cC--CCCEEEECCCCCCC-CCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC----------CCCEEEEeCCHHhc
Confidence 87 59999999998754 5667788999999999999999999999999998751 26899999999888
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC-----------------CCCchhhHHH
Q psy11190 160 IEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN-----------------APLEVGAATA 222 (248)
Q Consensus 160 ~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~-----------------~~~~~~~~~~ 222 (248)
.+. ++...|+++|++++.|++.++.+++++||++++|+||+++|++.... ...+|+++++
T Consensus 150 ~~~---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~ 226 (261)
T 1gee_A 150 IPW---PLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAA 226 (261)
T ss_dssp SCC---TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTSSCBCHHHHHH
T ss_pred CCC---CCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcccChhHHHHHHhcCCCCCCcCHHHHHH
Confidence 766 77889999999999999999999999999999999999999975321 1357999999
Q ss_pred HHHHHhhhcccccccceeeeCCe
Q psy11190 223 GIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 223 ~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
.++.++++.....+|+.+.++|.
T Consensus 227 ~~~~l~~~~~~~~~G~~~~v~gg 249 (261)
T 1gee_A 227 VAAWLASSEASYVTGITLFADGG 249 (261)
T ss_dssp HHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHHhCccccCCCCcEEEEcCC
Confidence 99999987777889999999986
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-37 Score=256.06 Aligned_cols=223 Identities=22% Similarity=0.285 Sum_probs=192.2
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHh-hc-------CCceeEEeeccCCchhhhhHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQ-QH-------SNLHVIELDVTDFSKQQDVLF 73 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~-~~-------~~~~~~~~D~~~~~~~v~~~~ 73 (248)
|++|||||++|||++++++|+++| ++|++++|+.++++++.+... .+ .++.++++|++|.++ ++.++
T Consensus 8 k~vlITGasggiG~~la~~l~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~ 82 (264)
T 2pd6_A 8 ALALVTGAGSGIGRAVSVRLAGEG----ATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARA-ARCLL 82 (264)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT----CEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHH-HHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCC----CEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHH-HHHHH
Confidence 689999999999999999999999 899999999887766643222 12 478899999999999 99999
Q ss_pred HHhhhhhcCCCc-cEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCC-CceEE
Q psy11190 74 KDISDVVKDQGL-NVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSS-RAAIV 151 (248)
Q Consensus 74 ~~i~~~~~~~~i-D~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~-~~~iv 151 (248)
+.+.+.++ ++ |+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|.++ + .++||
T Consensus 83 ~~~~~~~g--~i~d~vi~~Ag~~~~-~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-----------~~~g~iv 148 (264)
T 2pd6_A 83 EQVQACFS--RPPSVVVSCAGITQD-EFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSN-----------GCRGSII 148 (264)
T ss_dssp HHHHHHHS--SCCSEEEECCCCCCC-BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----------TCCEEEE
T ss_pred HHHHHHhC--CCCeEEEECCCcCCC-cchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhc-----------CCCceEE
Confidence 99999887 58 999999998764 667778999999999999999999999999999875 3 68999
Q ss_pred EeecCCCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC---------------CCCc
Q psy11190 152 NVSSIMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN---------------APLE 216 (248)
Q Consensus 152 ~vss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~---------------~~~~ 216 (248)
++||..+..+. ++...|+++|++++.|++.++.+++++||++++|+||+++|++.... ...+
T Consensus 149 ~isS~~~~~~~---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (264)
T 2pd6_A 149 NISSIVGKVGN---VGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQKVVDKITEMIPMGHLGD 225 (264)
T ss_dssp EECCTHHHHCC---TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC----------CTGGGCTTCSCBC
T ss_pred EECChhhccCC---CCChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhcCHHHHHHHHHhCCCCCCCC
Confidence 99999887776 77889999999999999999999999999999999999999985431 1247
Q ss_pred hhhHHHHHHHHhhhcccccccceeeeCCee
Q psy11190 217 VGAATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
|+++++.++.++++.....+|+.+.++|..
T Consensus 226 ~~dva~~~~~l~~~~~~~~~G~~~~v~gg~ 255 (264)
T 2pd6_A 226 PEDVADVVAFLASEDSGYITGTSVEVTGGL 255 (264)
T ss_dssp HHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred HHHHHHHHHHHcCCcccCCCCCEEEECCCc
Confidence 899999999999877778899999999863
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-37 Score=254.63 Aligned_cols=223 Identities=24% Similarity=0.298 Sum_probs=175.3
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEe-ecCchhHHHHHHH-HhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFAT-CRNKDKAVELLAL-AQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~-~r~~~~~~~~~~~-~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|++|||||++|||++++++|+++| ++|+++ .|+.+.++++.+. ...+.++.++++|++|.++ ++.+++++.+.
T Consensus 6 ~~vlItGasggiG~~~a~~l~~~G----~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~ 80 (247)
T 2hq1_A 6 KTAIVTGSSRGLGKAIAWKLGNMG----ANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPED-VENMVKTAMDA 80 (247)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTT----CEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHH-HHHHHHHHHHH
T ss_pred cEEEEECCCchHHHHHHHHHHHCC----CEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHH-HHHHHHHHHHh
Confidence 689999999999999999999999 899998 6777777666433 3335578999999999999 99999999998
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
++ ++|+||||||.... .++.+.+.+++++.+++|+.+++++++.++|.|.++ +.++||++||..+.
T Consensus 81 ~~--~~d~vi~~Ag~~~~-~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-----------~~~~iv~~sS~~~~ 146 (247)
T 2hq1_A 81 FG--RIDILVNNAGITRD-TLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQ-----------KSGKIINITSIAGI 146 (247)
T ss_dssp HS--CCCEEEECC----------------CHHHHHHTHHHHHHHHHHHHHHHHHH-----------TCEEEEEECC----
T ss_pred cC--CCCEEEECCCCCCC-CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----------CCcEEEEEcChhhc
Confidence 87 59999999998754 666778889999999999999999999999999875 57899999999888
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC---------------CCCchhhHHHHH
Q psy11190 160 IEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN---------------APLEVGAATAGI 224 (248)
Q Consensus 160 ~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~---------------~~~~~~~~~~~~ 224 (248)
.+. ++...|+++|++++.|++.++.+++++||++|+|.||+++|++.... ...+|+++++.+
T Consensus 147 ~~~---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~ 223 (247)
T 2hq1_A 147 IGN---AGQANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVLPDKVKEMYLNNIPLKRFGTPEEVANVV 223 (247)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHTTSTTSSCBCHHHHHHHH
T ss_pred cCC---CCCcHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhhcchHHHHHHHhhCCCCCCCCHHHHHHHH
Confidence 776 77889999999999999999999999999999999999999864321 135799999999
Q ss_pred HHHhhhcccccccceeeeCCee
Q psy11190 225 IQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 225 ~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
+.+++......+|+.+.++|..
T Consensus 224 ~~l~~~~~~~~~G~~~~v~gG~ 245 (247)
T 2hq1_A 224 GFLASDDSNYITGQVINIDGGL 245 (247)
T ss_dssp HHHHSGGGTTCCSCEEEESTTC
T ss_pred HHHcCcccccccCcEEEeCCCc
Confidence 9988876677899999998863
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-37 Score=254.42 Aligned_cols=224 Identities=21% Similarity=0.289 Sum_probs=193.6
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEE-eecCchhHHHHHH-HHhhcCCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFA-TCRNKDKAVELLA-LAQQHSNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~-~~r~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
.|++|||||++|||++++++|+++| ++|++ .+|+.++.+++.+ +...+.++.++++|++|.++ ++++++++.+
T Consensus 1 ~k~vlVTGasggiG~~la~~l~~~G----~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~ 75 (244)
T 1edo_A 1 SPVVVVTGASRGIGKAIALSLGKAG----CKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEAD-VEAMMKTAID 75 (244)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTT----CEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHH-HHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCC----CEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHH-HHHHHHHHHH
Confidence 3789999999999999999999999 89998 5898877776643 33334578899999999999 9999999998
Q ss_pred hhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 79 VVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
.++ ++|+||||||.... .++.+.+.+++++.+++|+.+++++++.++|.|.++ +.++||++||..+
T Consensus 76 ~~g--~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----------~~~~iv~~sS~~~ 141 (244)
T 1edo_A 76 AWG--TIDVVVNNAGITRD-TLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKK-----------RKGRIINIASVVG 141 (244)
T ss_dssp HSS--CCSEEEECCCCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----------TCEEEEEECCTHH
T ss_pred HcC--CCCEEEECCCCCCC-cCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc-----------CCCEEEEECChhh
Confidence 887 59999999998765 666778899999999999999999999999999875 5789999999988
Q ss_pred cccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC---------------CCCchhhHHHH
Q psy11190 159 SIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN---------------APLEVGAATAG 223 (248)
Q Consensus 159 ~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~---------------~~~~~~~~~~~ 223 (248)
..+. ++...|+++|++++.|++.++.++.++||++++|+||+++|++.... ...+|+++++.
T Consensus 142 ~~~~---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~ 218 (244)
T 1edo_A 142 LIGN---IGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKKILGTIPLGRTGQPENVAGL 218 (244)
T ss_dssp HHCC---TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCHHHHHHHHTSCTTCSCBCHHHHHHH
T ss_pred cCCC---CCCccchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhhcChHHHHHHhhcCCCCCCCCHHHHHHH
Confidence 7776 77889999999999999999999999999999999999999875331 13579999999
Q ss_pred HHHHh-hhcccccccceeeeCCee
Q psy11190 224 IIQFI-QSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 224 ~~~~~-~~~~~~~~g~~~~~~g~~ 246 (248)
++.++ ++.....+|+.+.++|..
T Consensus 219 ~~~l~~~~~~~~~~G~~~~v~gG~ 242 (244)
T 1edo_A 219 VEFLALSPAASYITGQAFTIDGGI 242 (244)
T ss_dssp HHHHHHCSGGGGCCSCEEEESTTT
T ss_pred HHHHhCCCccCCcCCCEEEeCCCc
Confidence 99988 444567899999999863
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-38 Score=272.33 Aligned_cols=223 Identities=16% Similarity=0.114 Sum_probs=187.5
Q ss_pred CceEEEecCCC--chhHHHHHHHHhCCCCCCceEEEeecCc---------hhHHHHHHHHhh----cCCceeEEeeccCC
Q psy11190 1 MKSILITGCNR--GLGLGMIKVLVGLGNNQPAHIFATCRNK---------DKAVELLALAQQ----HSNLHVIELDVTDF 65 (248)
Q Consensus 1 ~k~~lVtGas~--giG~~ia~~l~~~g~~~~~~V~~~~r~~---------~~~~~~~~~~~~----~~~~~~~~~D~~~~ 65 (248)
.|++|||||++ |||+++|++|+++| ++|++.+++. ++++........ ...+.++++|+++.
T Consensus 2 ~k~~lITGas~~~GIG~aiA~~la~~G----~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~ 77 (329)
T 3lt0_A 2 EDICFIAGIGDTNGYGWGIAKELSKRN----VKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFD 77 (329)
T ss_dssp CCEEEEECCSSSSSHHHHHHHHHHHTT----CEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCS
T ss_pred CcEEEEECCCCCCchHHHHHHHHHHCC----CEEEEEecCccccccccchHHHHHHHHHHHhhccccccccccccccccc
Confidence 37999999986 99999999999999 8999776654 222222111111 12367888998887
Q ss_pred --c------------------hhhhhHHHHhhhhhcCCCccEEEeccccCC-ccccCCCCChhhhhheeeecchhhHHHH
Q psy11190 66 --S------------------KQQDVLFKDISDVVKDQGLNVLVNNAGIAA-KFTRLGLLKPEQMTDHFLVNVTAPLMLT 124 (248)
Q Consensus 66 --~------------------~~v~~~~~~i~~~~~~~~iD~lv~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~ 124 (248)
+ + ++++++++.+.++ ++|+||||||+.. ...++.+.+.++|++.+++|+.++++++
T Consensus 78 ~~~~~~~~~~~~~~~Dlsd~~~-v~~~~~~~~~~~g--~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~ 154 (329)
T 3lt0_A 78 TANDIDEETKNNKRYNMLQNYT-IEDVANLIHQKYG--KINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLC 154 (329)
T ss_dssp SGGGCCHHHHTSHHHHTCCSCS-HHHHHHHHHHHHC--CEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred chhhhhhhhcccccccccCHHH-HHHHHHHHHHhcC--CCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHH
Confidence 6 7 9999999999988 6999999999752 2367888999999999999999999999
Q ss_pred HHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcccccCCCCCc-cchhhHHHHHHHHHHHHhhccC-CCeEEEEecCc
Q psy11190 125 KTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFH-PYRCSKAALNAATRSLSIDLKG-DKIIATAMHPG 202 (248)
Q Consensus 125 ~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~~~~~~~~~-~y~~sK~a~~~~~~~la~e~~~-~~i~v~~v~PG 202 (248)
+.++|.|++ .|+||++||.++..+. +++. .|++||+++.+|+++|+.|+++ +||+||+|+||
T Consensus 155 ~~~~p~m~~-------------~g~Iv~isS~~~~~~~---~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG 218 (329)
T 3lt0_A 155 KYFVNIMKP-------------QSSIISLTYHASQKVV---PGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAG 218 (329)
T ss_dssp HHHGGGEEE-------------EEEEEEEECGGGTSCC---TTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEC
T ss_pred HHHHHHHhh-------------CCeEEEEeCccccCCC---CcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecc
Confidence 999999976 3899999999998876 7775 9999999999999999999998 89999999999
Q ss_pred ceecCCCCCC------------------------------------------------------------CCCchhhHHH
Q psy11190 203 WVKTDMGGSN------------------------------------------------------------APLEVGAATA 222 (248)
Q Consensus 203 ~v~t~~~~~~------------------------------------------------------------~~~~~~~~~~ 222 (248)
+++|+|.+.. ...+|+++++
T Consensus 219 ~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~ 298 (329)
T 3lt0_A 219 PLKSRAATAINKLNNTYENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGS 298 (329)
T ss_dssp CCCCHHHHTCC------------------------------------------CHHHHHHHHHHHHSSSCSCCCHHHHHH
T ss_pred eeechhHhhhhhhcccccccccccccccccccchhhcccccchhhhhhhhcccchhHHHHHHHhhcCcccCcCCHHHHHH
Confidence 9999985432 1357999999
Q ss_pred HHHHHhhhcccccccceeeeCCee
Q psy11190 223 GIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 223 ~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
.+++++++.....+|+.+.+||..
T Consensus 299 ~v~fL~s~~a~~itG~~i~vdGG~ 322 (329)
T 3lt0_A 299 VASFLLSRESRAITGQTIYVDNGL 322 (329)
T ss_dssp HHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHHhCchhccccCcEEEEcCCe
Confidence 999999988889999999999963
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-37 Score=253.09 Aligned_cols=223 Identities=24% Similarity=0.355 Sum_probs=195.2
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHh--hcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQ--QHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|+++||||++|||++++++|+++| ++|++++|+.++++++.+... .+.++.++.+|++|.++ ++++++++.+.
T Consensus 8 ~~vlVtGasggiG~~la~~l~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~ 82 (248)
T 2pnf_A 8 KVSLVTGSTRGIGRAIAEKLASAG----STVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEES-INKAFEEIYNL 82 (248)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTT----CEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHH-HHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCC----CEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHH-HHHHHHHHHHh
Confidence 689999999999999999999999 899999999887776644332 24578899999999999 99999999998
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
++ ++|+||||||.... .++.+.+.+++++.+++|+.+++++++.++|.|.++ +.++||++||..+.
T Consensus 83 ~~--~~d~vi~~Ag~~~~-~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-----------~~~~iv~~sS~~~~ 148 (248)
T 2pnf_A 83 VD--GIDILVNNAGITRD-KLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQ-----------RWGRIVNISSVVGF 148 (248)
T ss_dssp SS--CCSEEEECCCCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHH-----------TCEEEEEECCHHHH
T ss_pred cC--CCCEEEECCCCCCC-CccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-----------CCcEEEEEccHHhc
Confidence 87 59999999998754 566778899999999999999999999999999875 57899999998887
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC---------------CCCchhhHHHHH
Q psy11190 160 IEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN---------------APLEVGAATAGI 224 (248)
Q Consensus 160 ~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~---------------~~~~~~~~~~~~ 224 (248)
.+. ++...|+++|++++.|++.++.++.++||++++|.||+++|++.... ...+|+++++.+
T Consensus 149 ~~~---~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~ 225 (248)
T 2pnf_A 149 TGN---VGQVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVLSEEIKQKYKEQIPLGRFGSPEEVANVV 225 (248)
T ss_dssp HCC---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHHHHHTCTTSSCBCHHHHHHHH
T ss_pred CCC---CCCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhccHHHHHHHHhcCCCCCccCHHHHHHHH
Confidence 765 67889999999999999999999999999999999999999975431 134799999999
Q ss_pred HHHhhhcccccccceeeeCCee
Q psy11190 225 IQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 225 ~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
+.++++.....+|+.+.++|..
T Consensus 226 ~~l~~~~~~~~~G~~~~v~gg~ 247 (248)
T 2pnf_A 226 LFLCSELASYITGEVIHVNGGM 247 (248)
T ss_dssp HHHHSGGGTTCCSCEEEESTTC
T ss_pred HHHhCchhhcCCCcEEEeCCCc
Confidence 9999877777899999998863
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-36 Score=254.03 Aligned_cols=223 Identities=17% Similarity=0.194 Sum_probs=193.6
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHh-hcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQ-QHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|++|||||++|||++++++|+++| ++|++++|+.++.+++.+... .+.++.++++|++|.++ ++.+++++.+.+
T Consensus 35 k~vlITGasggIG~~la~~L~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-~~~~~~~~~~~~ 109 (279)
T 3ctm_A 35 KVASVTGSSGGIGWAVAEAYAQAG----ADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKS-VEETISQQEKDF 109 (279)
T ss_dssp CEEEETTTTSSHHHHHHHHHHHHT----CEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHH-HHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHH-HHHHHHHHHHHh
Confidence 689999999999999999999999 899999999887776644333 35578899999999999 999999999988
Q ss_pred cCCCccEEEeccccCCccccCC-CCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLG-LLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
+ ++|+||||||......++. +.+.++|++.+++|+.+++++++.+++.|+++ +.++||++||..+.
T Consensus 110 g--~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----------~~~~iv~isS~~~~ 176 (279)
T 3ctm_A 110 G--TIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKN-----------GKGSLIITSSISGK 176 (279)
T ss_dssp S--CCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----------TCCEEEEECCCTTS
T ss_pred C--CCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----------CCCeEEEECchHhc
Confidence 7 5999999999865424455 77889999999999999999999999999875 57899999999987
Q ss_pred cc--ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC---------------CCCchhhHHH
Q psy11190 160 IE--DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN---------------APLEVGAATA 222 (248)
Q Consensus 160 ~~--~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~---------------~~~~~~~~~~ 222 (248)
.+ . ++...|+++|++++.|+++++.+++++| +||+|+||+++|++.... ...+|+++++
T Consensus 177 ~~~~~---~~~~~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ 252 (279)
T 3ctm_A 177 IVNIP---QLQAPYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFASKDMKAKWWQLTPLGREGLTQELVG 252 (279)
T ss_dssp CC------CCHHHHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSCCHHHHHHHHHHSTTCSCBCGGGTHH
T ss_pred cCCCC---CCcccHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCccccccccChHHHHHHHHhCCccCCcCHHHHHH
Confidence 66 4 6678899999999999999999999999 999999999999987532 1357999999
Q ss_pred HHHHHhhhcccccccceeeeCCee
Q psy11190 223 GIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 223 ~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
.++.++++.....+|+.+.++|..
T Consensus 253 ~~~~l~s~~~~~~tG~~i~vdgG~ 276 (279)
T 3ctm_A 253 GYLYLASNASTFTTGSDVVIDGGY 276 (279)
T ss_dssp HHHHHHSGGGTTCCSCEEEESTTC
T ss_pred HHHHHhCccccCccCCEEEECCCe
Confidence 999999887788999999999864
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-37 Score=284.12 Aligned_cols=216 Identities=21% Similarity=0.265 Sum_probs=184.2
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH-HHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL-LALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|++|||||++|||+++|++|+++| ++|++.++.. ++++ .++...++++..+.+|++ ++ .+++++++.+.+
T Consensus 323 kvalVTGas~GIG~a~A~~la~~G----a~Vv~~~~~~--~~~~~~~i~~~g~~~~~~~~Dv~--~~-~~~~~~~~~~~~ 393 (604)
T 2et6_A 323 KVVLITGAGAGLGKEYAKWFAKYG----AKVVVNDFKD--ATKTVDEIKAAGGEAWPDQHDVA--KD-SEAIIKNVIDKY 393 (604)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTT----CEEEEECSSC--CHHHHHHHHHTTCEEEEECCCHH--HH-HHHHHHHHHHHH
T ss_pred CeEEEECcchHHHHHHHHHHHHCC----CEEEEEeCcc--HHHHHHHHHhcCCeEEEEEcChH--HH-HHHHHHHHHHhc
Confidence 789999999999999999999999 8999998642 3334 333333456777788884 44 677888888888
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
| ++|+||||||+... .++.+++.++|++.+++|+.++++++++++|.|+++ +.|+||++||.++..
T Consensus 394 G--~iDiLVnNAGi~~~-~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~-----------~~G~IVnisS~ag~~ 459 (604)
T 2et6_A 394 G--TIDILVNNAGILRD-RSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEK-----------QFGRIINITSTSGIY 459 (604)
T ss_dssp S--CCCEEEECCCCCCC-BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----------TCEEEEEECCHHHHS
T ss_pred C--CCCEEEECCCCCCC-CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----------CCCEEEEECChhhcc
Confidence 8 69999999998765 778899999999999999999999999999999875 579999999999988
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC------CCCchhhHHHHHHHHhhhcccc
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN------APLEVGAATAGIIQFIQSLGEA 234 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~------~~~~~~~~~~~~~~~~~~~~~~ 234 (248)
+. +++..|++||+++.+|+++|+.|++++|||||+|+||+ +|+|+... ...+|++++..+++++++...
T Consensus 460 ~~---~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~PG~-~T~m~~~~~~~~~~~~~~pe~vA~~v~~L~s~~~~- 534 (604)
T 2et6_A 460 GN---FGQANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPHA-ETAMTLSIMREQDKNLYHADQVAPLLVYLGTDDVP- 534 (604)
T ss_dssp CC---TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC-CCCC---------CCSSCGGGTHHHHHHTTSTTCC-
T ss_pred CC---CCChhHHHHHHHHHHHHHHHHHHhCccCeEEEEEcCCC-CCccccccCchhhccCCCHHHHHHHHHHHhCCccC-
Confidence 76 78889999999999999999999999999999999996 99987542 235799999999999888777
Q ss_pred cccceeeeCCe
Q psy11190 235 HNGGFFEYTGK 245 (248)
Q Consensus 235 ~~g~~~~~~g~ 245 (248)
.+|+.+.++|.
T Consensus 535 itG~~~~vdGG 545 (604)
T 2et6_A 535 VTGETFEIGGG 545 (604)
T ss_dssp CCSCEEEEETT
T ss_pred CCCcEEEECCC
Confidence 99999999885
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-37 Score=283.86 Aligned_cols=218 Identities=22% Similarity=0.246 Sum_probs=187.5
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCc---------hhHHHHHHHHhhcCCceeEEeeccCCchhhhhH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNK---------DKAVELLALAQQHSNLHVIELDVTDFSKQQDVL 72 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~---------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~ 72 (248)
|++|||||++|||+++|+.|+++| ++|++.+|+. +.++++.+.+...+. . ..+|++|.++ ++++
T Consensus 9 kvalVTGas~GIG~a~A~~la~~G----a~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~-~-~~~d~~d~~~-~~~~ 81 (604)
T 2et6_A 9 KVVIITGAGGGLGKYYSLEFAKLG----AKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGG-V-AVADYNNVLD-GDKI 81 (604)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT----CEEEEECC-----------CHHHHHHHHHHHTTC-E-EEEECCCTTC-HHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHcC----CEEEEEeCCccccccccchHHHHHHHHHHHhcCC-e-EEEEcCCHHH-HHHH
Confidence 799999999999999999999999 8999998765 556655433322221 1 2479999988 9999
Q ss_pred HHHhhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEE
Q psy11190 73 FKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVN 152 (248)
Q Consensus 73 ~~~i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~ 152 (248)
++.+.+.+| ++|+||||||+... .++.+++.++|++.+++|+.|+++++++++|+|+++ +.|+||+
T Consensus 82 v~~~~~~~G--~iDiLVnNAGi~~~-~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~-----------~~G~IVn 147 (604)
T 2et6_A 82 VETAVKNFG--TVHVIINNAGILRD-ASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQ-----------KYGRIVN 147 (604)
T ss_dssp HHHHHHHHS--CCCEEEECCCCCCC-BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----------TCEEEEE
T ss_pred HHHHHHHcC--CCCEEEECCCCCCC-CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----------CCCEEEE
Confidence 999999998 69999999998765 778889999999999999999999999999999886 5799999
Q ss_pred eecCCCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC------CCCchhhHHHHHHH
Q psy11190 153 VSSIMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN------APLEVGAATAGIIQ 226 (248)
Q Consensus 153 vss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~------~~~~~~~~~~~~~~ 226 (248)
+||.++..+. +++..|++||+++.+|+++|+.|++++|||||+|+|| ++|+|+... ...+|++++..+++
T Consensus 148 isS~ag~~~~---~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~~T~m~~~~~~~~~~~~~~pe~vA~~v~~ 223 (604)
T 2et6_A 148 TSSPAGLYGN---FGQANYASAKSALLGFAETLAKEGAKYNIKANAIAPL-ARSRMTESIMPPPMLEKLGPEKVAPLVLY 223 (604)
T ss_dssp ECCHHHHHCC---TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-CCCHHHHTTSCHHHHTTCSHHHHHHHHHH
T ss_pred ECCHHHcCCC---CCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC-CcCccccccCChhhhccCCHHHHHHHHHH
Confidence 9999998876 7888999999999999999999999999999999998 688875432 23689999999999
Q ss_pred HhhhcccccccceeeeCCe
Q psy11190 227 FIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 227 ~~~~~~~~~~g~~~~~~g~ 245 (248)
++++. ...+|+.+..+|.
T Consensus 224 L~s~~-~~itG~~~~vdgG 241 (604)
T 2et6_A 224 LSSAE-NELTGQFFEVAAG 241 (604)
T ss_dssp HTSSS-CCCCSCEEEEETT
T ss_pred HhCCc-ccCCCCEEEECCC
Confidence 99887 7889999998885
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-37 Score=273.36 Aligned_cols=223 Identities=23% Similarity=0.305 Sum_probs=191.3
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||++|||+++|++|+++| ++|++++|+... +++.+.... ..+.++++|++|.++ ++++++++.+.++
T Consensus 214 k~~LVTGgsgGIG~aiA~~La~~G----a~Vvl~~r~~~~-~~l~~~~~~-~~~~~~~~Dvtd~~~-v~~~~~~~~~~~g 286 (454)
T 3u0b_A 214 KVAVVTGAARGIGATIAEVFARDG----ATVVAIDVDGAA-EDLKRVADK-VGGTALTLDVTADDA-VDKITAHVTEHHG 286 (454)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTT----CEEEEEECGGGH-HHHHHHHHH-HTCEEEECCTTSTTH-HHHHHHHHHHHST
T ss_pred CEEEEeCCchHHHHHHHHHHHHCC----CEEEEEeCCccH-HHHHHHHHH-cCCeEEEEecCCHHH-HHHHHHHHHHHcC
Confidence 799999999999999999999999 899999997532 223222221 245789999999999 9999999999886
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
. ++|+||||||+... ..+.+.+.++|++.+++|+.+++++++.+++.|.++ +.++||++||.++..+
T Consensus 287 ~-~id~lV~nAGv~~~-~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~-----------~~g~iV~iSS~a~~~g 353 (454)
T 3u0b_A 287 G-KVDILVNNAGITRD-KLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIG-----------EGGRVIGLSSMAGIAG 353 (454)
T ss_dssp T-CCSEEEECCCCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSC-----------TTCEEEEECCHHHHHC
T ss_pred C-CceEEEECCcccCC-CccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhc-----------CCCEEEEEeChHhCCC
Confidence 1 39999999999876 778889999999999999999999999999998765 5789999999999988
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC---------------CCchhhHHHHHHH
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA---------------PLEVGAATAGIIQ 226 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~---------------~~~~~~~~~~~~~ 226 (248)
. +++..|+++|+++++|+++++.|++++||+||+|+||+++|+|..... ..+|+++++.+++
T Consensus 354 ~---~g~~~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~l~r~g~pedvA~~v~f 430 (454)
T 3u0b_A 354 N---RGQTNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAIPLATREVGRRLNSLFQGGQPVDVAELIAY 430 (454)
T ss_dssp C---TTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC----------CHHHHHSBTTSSCBCHHHHHHHHHH
T ss_pred C---CCCHHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhcchhhHHHHHhhccccCCCCHHHHHHHHHH
Confidence 7 888999999999999999999999999999999999999999976432 2479999999999
Q ss_pred HhhhcccccccceeeeCCeec
Q psy11190 227 FIQSLGEAHNGGFFEYTGKAI 247 (248)
Q Consensus 227 ~~~~~~~~~~g~~~~~~g~~~ 247 (248)
++++.....+|+.+.+||..+
T Consensus 431 L~s~~a~~itG~~i~vdGG~~ 451 (454)
T 3u0b_A 431 FASPASNAVTGNTIRVCGQAM 451 (454)
T ss_dssp HHCGGGTTCCSCEEEESSSBS
T ss_pred HhCCccCCCCCcEEEECCccc
Confidence 999988999999999999753
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-36 Score=250.97 Aligned_cols=220 Identities=22% Similarity=0.266 Sum_probs=192.3
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCc-eeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNL-HVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|++|||||++|||++++++|+++| ++|++++|+.++++++.+.. +.++ .++++|++|.++ ++.+++.+.+ +
T Consensus 12 k~vlITGasggiG~~la~~l~~~G----~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~-~~~~~~~~~~-~ 83 (254)
T 2wsb_A 12 ACAAVTGAGSGIGLEICRAFAASG----ARLILIDREAAALDRAAQEL--GAAVAARIVADVTDAEA-MTAAAAEAEA-V 83 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHH--GGGEEEEEECCTTCHHH-HHHHHHHHHH-H
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHh--cccceeEEEEecCCHHH-HHHHHHHHHh-h
Confidence 689999999999999999999999 89999999988777664433 3356 789999999999 9999999988 7
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+ ++|+||||||.... .++.+.+.+++++.+++|+.+++++++.++|.|+++ +.++||++||..+..
T Consensus 84 ~--~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-----------~~~~iv~isS~~~~~ 149 (254)
T 2wsb_A 84 A--PVSILVNSAGIARL-HDALETDDATWRQVMAVNVDGMFWASRAFGRAMVAR-----------GAGAIVNLGSMSGTI 149 (254)
T ss_dssp S--CCCEEEECCCCCCC-BCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----------TCEEEEEECCGGGTS
T ss_pred C--CCcEEEECCccCCC-CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----------CCcEEEEEecchhcc
Confidence 6 59999999998765 677788999999999999999999999999999886 578999999998876
Q ss_pred cccCCCCC--ccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC-----------------CCCCchhhHH
Q psy11190 161 EDNTQGGF--HPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS-----------------NAPLEVGAAT 221 (248)
Q Consensus 161 ~~~~~~~~--~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~-----------------~~~~~~~~~~ 221 (248)
+. ++. ..|+++|++++.|++.++.+++++||++++|+||+++|++.+. ....+|++++
T Consensus 150 ~~---~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva 226 (254)
T 2wsb_A 150 VN---RPQFASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRERPELFETWLDMTPMGRCGEPSEIA 226 (254)
T ss_dssp CC---SSSCBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHTCHHHHHHHHHTSTTSSCBCHHHHH
T ss_pred CC---CCCcchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccccChHHHHHHHhcCCCCCCCCHHHHH
Confidence 65 445 7899999999999999999999999999999999999987431 1135899999
Q ss_pred HHHHHHhhhcccccccceeeeCCee
Q psy11190 222 AGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 222 ~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
+.++.++++.....+|+.+.++|..
T Consensus 227 ~~~~~l~~~~~~~~~G~~~~v~gG~ 251 (254)
T 2wsb_A 227 AAALFLASPAASYVTGAILAVDGGY 251 (254)
T ss_dssp HHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHHHhCcccccccCCEEEECCCE
Confidence 9999999887778899999999863
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-36 Score=252.09 Aligned_cols=227 Identities=22% Similarity=0.287 Sum_probs=193.0
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH-HHHHh-hcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL-LALAQ-QHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~-~~~~~-~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|++|||||++|||++++++|+++| ++|++++|+.++..+. .++.. ...++.++++|++|.++ ++.+++++.+.
T Consensus 15 k~vlITGasggiG~~~a~~l~~~G----~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~-~~~~~~~~~~~ 89 (265)
T 1h5q_A 15 KTIIVTGGNRGIGLAFTRAVAAAG----ANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDI-VTKTIQQIDAD 89 (265)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTT----EEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHH-HHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCC----CeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHH-HHHHHHHHHHh
Confidence 689999999999999999999999 9999999987665544 33322 24578899999999999 99999999988
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
++ ++|+||||||.... .++.+.+.+++++.+++|+.+++++++.++|.|.+++ ..++||++||..+.
T Consensus 90 ~~--~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~----------~~~~iv~~sS~~~~ 156 (265)
T 1h5q_A 90 LG--PISGLIANAGVSVV-KPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQ----------QKGSIVVTSSMSSQ 156 (265)
T ss_dssp SC--SEEEEEECCCCCCC-SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT----------CCEEEEEECCGGGT
T ss_pred cC--CCCEEEECCCcCCC-CchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcC----------CCceEEEeCCchhh
Confidence 87 59999999998764 6677789999999999999999999999999998752 25899999998876
Q ss_pred ccccC----CCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC---------------CCCchhhH
Q psy11190 160 IEDNT----QGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN---------------APLEVGAA 220 (248)
Q Consensus 160 ~~~~~----~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~---------------~~~~~~~~ 220 (248)
.+... ..+...|+++|++++.|+++++.+++++||+|++|+||+++|++.+.. ...+|+++
T Consensus 157 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dv 236 (265)
T 1h5q_A 157 IINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIRDHQASNIPLNRFAQPEEM 236 (265)
T ss_dssp SCCEEETTEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHHHHHTCTTSSCBCGGGG
T ss_pred ccccccccccccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccccchhHHHHHHhcCcccCCCCHHHH
Confidence 55310 112678999999999999999999999999999999999999986532 13579999
Q ss_pred HHHHHHHhhhcccccccceeeeCCee
Q psy11190 221 TAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 221 ~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
++.++.++++.....+|+.+..+|..
T Consensus 237 a~~~~~l~~~~~~~~~G~~~~v~gG~ 262 (265)
T 1h5q_A 237 TGQAILLLSDHATYMTGGEYFIDGGQ 262 (265)
T ss_dssp HHHHHHHHSGGGTTCCSCEEEECTTG
T ss_pred HHHHHhhccCchhcCcCcEEEecCCE
Confidence 99999999887778899999998863
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-36 Score=250.06 Aligned_cols=222 Identities=20% Similarity=0.254 Sum_probs=193.0
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHH-HHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|++|||||+||||++++++|+++| ++|++++|+.++++++.+ +...+.++.++.+|++|.++ ++.+++++.+.+
T Consensus 12 ~~vlVtGasggiG~~la~~l~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~~ 86 (255)
T 1fmc_A 12 KCAIITGAGAGIGKEIAITFATAG----ASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQE-LSALADFAISKL 86 (255)
T ss_dssp CEEEETTTTSHHHHHHHHHHHTTT----CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH-HHHHHHHHHHHH
T ss_pred CEEEEECCccHHHHHHHHHHHHCC----CEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHH-HHHHHHHHHHhc
Confidence 689999999999999999999999 899999999887776643 33335578899999999999 999999999888
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+ ++|+||||||.... .++ +.+.+++++.+++|+.+++++++.++|.|+++ +.++||++||..+..
T Consensus 87 ~--~~d~vi~~Ag~~~~-~~~-~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-----------~~~~iv~~sS~~~~~ 151 (255)
T 1fmc_A 87 G--KVDILVNNAGGGGP-KPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKN-----------GGGVILTITSMAAEN 151 (255)
T ss_dssp S--SCCEEEECCCCCCC-CCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----------TCEEEEEECCGGGTC
T ss_pred C--CCCEEEECCCCCCC-CCC-CCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----------CCcEEEEEcchhhcC
Confidence 7 59999999998764 445 67899999999999999999999999999875 578999999998877
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC----------------CCCchhhHHHHH
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN----------------APLEVGAATAGI 224 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~----------------~~~~~~~~~~~~ 224 (248)
+. ++...|+++|++++.|++.++.+++++||++++|.||+++|++.+.. ...+|+++++.+
T Consensus 152 ~~---~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~ 228 (255)
T 1fmc_A 152 KN---INMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAA 228 (255)
T ss_dssp CC---TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCSSCSCBCHHHHHHHH
T ss_pred CC---CCCcccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhccChHHHHHHHhcCCcccCCCHHHHHHHH
Confidence 65 77889999999999999999999999999999999999999864321 135799999999
Q ss_pred HHHhhhcccccccceeeeCCee
Q psy11190 225 IQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 225 ~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
+.++++.....+|+.+..+|..
T Consensus 229 ~~l~~~~~~~~~G~~~~v~gg~ 250 (255)
T 1fmc_A 229 LFLCSPAASWVSGQILTVSGGG 250 (255)
T ss_dssp HHHHSGGGTTCCSCEEEESTTS
T ss_pred HHHhCCccccCCCcEEEECCce
Confidence 9999876677889999888753
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-36 Score=252.30 Aligned_cols=224 Identities=21% Similarity=0.187 Sum_probs=188.3
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||++|||++++++|+++| ++|++++|+.++++++.+.. ..++.++++|++|.++ ++++++++.+.++
T Consensus 13 k~vlVTGasggiG~~~a~~l~~~G----~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~-v~~~~~~~~~~~g 85 (265)
T 2o23_A 13 LVAVITGGASGLGLATAERLVGQG----ASAVLLDLPNSGGEAQAKKL--GNNCVFAPADVTSEKD-VQTALALAKGKFG 85 (265)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT----CEEEEEECTTSSHHHHHHHH--CTTEEEEECCTTCHHH-HHHHHHHHHHHHS
T ss_pred CEEEEECCCChHHHHHHHHHHHCC----CEEEEEeCCcHhHHHHHHHh--CCceEEEEcCCCCHHH-HHHHHHHHHHHCC
Confidence 789999999999999999999999 89999999988877664433 4578999999999999 9999999999887
Q ss_pred CCCccEEEeccccCCccccCC------CCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeec
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLG------LLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSS 155 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss 155 (248)
++|+||||||.... ..+. +.+.++|++.+++|+.+++++++.++|.|.++... .+.+.++||++||
T Consensus 86 --~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~-----~~~~~~~iv~isS 157 (265)
T 2o23_A 86 --RVDVAVNCAGIAVA-SKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPD-----QGGQRGVIINTAS 157 (265)
T ss_dssp --CCCEEEECCCCCCC-CCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCC-----TTSCCEEEEEECC
T ss_pred --CCCEEEECCccCCC-CccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccc-----cCCCCcEEEEeCC
Confidence 59999999998754 3222 36889999999999999999999999999874110 0013589999999
Q ss_pred CCCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC----------------CCCchhh
Q psy11190 156 IMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN----------------APLEVGA 219 (248)
Q Consensus 156 ~~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~----------------~~~~~~~ 219 (248)
..+..+. ++...|+++|++++.|++.++.+++++||+||+|+||+++|++.+.. ...+|++
T Consensus 158 ~~~~~~~---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 234 (265)
T 2o23_A 158 VAAFEGQ---VGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVCNFLASQVPFPSRLGDPAE 234 (265)
T ss_dssp THHHHCC---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC----------CHHHHTCSSSCSCBCHHH
T ss_pred hhhcCCC---CCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccccCHHHHHHHHHcCCCcCCCCCHHH
Confidence 9887766 77889999999999999999999999999999999999999986431 1247899
Q ss_pred HHHHHHHHhhhcccccccceeeeCCe
Q psy11190 220 ATAGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 220 ~~~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
+++.++.++. ....+|+.+.++|.
T Consensus 235 va~~~~~l~~--~~~~~G~~i~vdgG 258 (265)
T 2o23_A 235 YAHLVQAIIE--NPFLNGEVIRLDGA 258 (265)
T ss_dssp HHHHHHHHHH--CTTCCSCEEEESTT
T ss_pred HHHHHHHHhh--cCccCceEEEECCC
Confidence 9999999885 36789999999986
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-36 Score=252.18 Aligned_cols=230 Identities=22% Similarity=0.279 Sum_probs=194.8
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecC-chhHHHHHH-HHhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRN-KDKAVELLA-LAQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~-~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|++|||||+||||++++++|+++| ++|++++|+ .++++++.+ +...+.++.++++|++|.++ ++.+++++.+.
T Consensus 8 k~vlVTGasggiG~~~a~~l~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~ 82 (258)
T 3afn_B 8 KRVLITGSSQGIGLATARLFARAG----AKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEA-CQQLVDEFVAK 82 (258)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTT----CEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHH-HHHHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCC----CEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHH-HHHHHHHHHHH
Confidence 789999999999999999999999 899999999 777776643 33334578899999999999 99999999998
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
++ ++|+||||||......++.+.+.+++++.+++|+.+++++++.++|.|.++.... ...++||++||..+.
T Consensus 83 ~g--~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~------~~~~~iv~~sS~~~~ 154 (258)
T 3afn_B 83 FG--GIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKAS------GQTSAVISTGSIAGH 154 (258)
T ss_dssp HS--SCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHH------TSCEEEEEECCTHHH
T ss_pred cC--CCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCC------CCCcEEEEecchhhc
Confidence 87 5999999999733336677788999999999999999999999999998652100 023899999999887
Q ss_pred c-cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC---------------CCCchhhHHHH
Q psy11190 160 I-EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN---------------APLEVGAATAG 223 (248)
Q Consensus 160 ~-~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~---------------~~~~~~~~~~~ 223 (248)
. +. ++...|+++|++++.|++.++.+++++||++++|+||+++|++.... ...+|+++++.
T Consensus 155 ~~~~---~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~ 231 (258)
T 3afn_B 155 TGGG---PGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADKTQDVRDRISNGIPMGRFGTAEEMAPA 231 (258)
T ss_dssp HCCC---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTCCHHHHHHHHTTCTTCSCBCGGGTHHH
T ss_pred cCCC---CCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccccCHHHHHHHhccCCCCcCCCHHHHHHH
Confidence 6 54 67889999999999999999999999999999999999999986532 13579999999
Q ss_pred HHHHhhhccc-ccccceeeeCCeec
Q psy11190 224 IIQFIQSLGE-AHNGGFFEYTGKAI 247 (248)
Q Consensus 224 ~~~~~~~~~~-~~~g~~~~~~g~~~ 247 (248)
++.++++... ..+|+.+.++|...
T Consensus 232 ~~~l~~~~~~~~~~G~~~~v~gg~~ 256 (258)
T 3afn_B 232 FLFFASHLASGYITGQVLDINGGQY 256 (258)
T ss_dssp HHHHHCHHHHTTCCSEEEEESTTSS
T ss_pred HHHHhCcchhccccCCEEeECCCcc
Confidence 9999987666 77999999998653
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-38 Score=255.74 Aligned_cols=213 Identities=11% Similarity=0.095 Sum_probs=184.7
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||++|||++++++|+++| ++|++++|+.++.. ....++++|++|.++ ++++++++.+.++
T Consensus 4 k~vlITGas~gIG~~~a~~l~~~G----~~V~~~~r~~~~~~---------~~~~~~~~D~~~~~~-~~~~~~~~~~~~~ 69 (236)
T 1ooe_A 4 GKVIVYGGKGALGSAILEFFKKNG----YTVLNIDLSANDQA---------DSNILVDGNKNWTEQ-EQSILEQTASSLQ 69 (236)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTT----EEEEEEESSCCTTS---------SEEEECCTTSCHHHH-HHHHHHHHHHHHT
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC----CEEEEEecCccccc---------cccEEEeCCCCCHHH-HHHHHHHHHHHhC
Confidence 789999999999999999999999 99999999976532 135678899999999 9999999999883
Q ss_pred CCCccEEEeccccCCccccC-CCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRL-GLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
.+++|+||||||.... .++ .+.+.++|++.+++|+.+++++++.++|.|.+ .++||++||..+..
T Consensus 70 ~g~id~lv~~Ag~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-------------~g~iv~isS~~~~~ 135 (236)
T 1ooe_A 70 GSQVDGVFCVAGGWAG-GSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP-------------GGLLQLTGAAAAMG 135 (236)
T ss_dssp TCCEEEEEECCCCCCC-BCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE-------------EEEEEEECCGGGGS
T ss_pred CCCCCEEEECCcccCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc-------------CCEEEEECchhhcc
Confidence 2259999999998764 556 67788999999999999999999999999854 47999999999887
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhcc--CCCeEEEEecCcceecCCCCCC-------CCCchhhHHHHHHHHh-hh
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLK--GDKIIATAMHPGWVKTDMGGSN-------APLEVGAATAGIIQFI-QS 230 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~--~~~i~v~~v~PG~v~t~~~~~~-------~~~~~~~~~~~~~~~~-~~ 230 (248)
+. ++...|+++|+++++|+++++.|++ ++||+||+|+||+++|++.+.. ...+|+++++.++.++ ++
T Consensus 136 ~~---~~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~dvA~~i~~~l~s~ 212 (236)
T 1ooe_A 136 PT---PSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMPNADHSSWTPLSFISEHLLKWTTET 212 (236)
T ss_dssp CC---TTBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHSTTCCGGGCBCHHHHHHHHHHHHHCG
T ss_pred CC---CCcHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcchhhcCCCccccccCCHHHHHHHHHHHHcCC
Confidence 76 7888999999999999999999998 9999999999999999975421 1357899999999777 55
Q ss_pred cccccccceeeeCCe
Q psy11190 231 LGEAHNGGFFEYTGK 245 (248)
Q Consensus 231 ~~~~~~g~~~~~~g~ 245 (248)
.....+|+++.++|.
T Consensus 213 ~~~~~~G~~~~v~gg 227 (236)
T 1ooe_A 213 SSRPSSGALLKITTE 227 (236)
T ss_dssp GGCCCTTCEEEEEEE
T ss_pred CcccccccEEEEecC
Confidence 567789999998875
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-37 Score=256.02 Aligned_cols=211 Identities=13% Similarity=0.113 Sum_probs=185.5
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
+|++|||||++|||+++|++|+++| ++|++++|+.++.. ...+.+|++|.++ ++.+++++.+.+
T Consensus 22 ~k~vlITGas~gIG~~la~~l~~~G----~~V~~~~r~~~~~~-----------~~~~~~d~~d~~~-v~~~~~~~~~~~ 85 (251)
T 3orf_A 22 SKNILVLGGSGALGAEVVKFFKSKS----WNTISIDFRENPNA-----------DHSFTIKDSGEEE-IKSVIEKINSKS 85 (251)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT----CEEEEEESSCCTTS-----------SEEEECSCSSHHH-HHHHHHHHHTTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC----CEEEEEeCCccccc-----------ccceEEEeCCHHH-HHHHHHHHHHHc
Confidence 3799999999999999999999999 89999999986532 2357899999999 999999999988
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+ ++|+||||||.......+.+.+.+++++.+++|+.+++++++.++|.|++ .|+||++||..+..
T Consensus 86 g--~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-------------~g~iv~isS~~~~~ 150 (251)
T 3orf_A 86 I--KVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQ-------------GGLFVLTGASAALN 150 (251)
T ss_dssp C--CEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE-------------EEEEEEECCGGGGS
T ss_pred C--CCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhcc-------------CCEEEEEechhhcc
Confidence 7 69999999998766344677889999999999999999999999999854 57999999999987
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhcc--CCCeEEEEecCcceecCCCCCC-------CCCchhhHHHHHHHHhhh-
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLK--GDKIIATAMHPGWVKTDMGGSN-------APLEVGAATAGIIQFIQS- 230 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~--~~~i~v~~v~PG~v~t~~~~~~-------~~~~~~~~~~~~~~~~~~- 230 (248)
+. ++...|+++|++++.|+++++.|++ ++||+||+|+||+++|++.+.. ...+|+++++.++.++++
T Consensus 151 ~~---~~~~~Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~dva~~i~~l~~~~ 227 (251)
T 3orf_A 151 RT---SGMIAYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTNRKYMSDANFDDWTPLSEVAEKLFEWSTNS 227 (251)
T ss_dssp CC---TTBHHHHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHHHHHHCTTSCGGGSBCHHHHHHHHHHHHHCG
T ss_pred CC---CCCchhHHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcchhhhcccccccccCCHHHHHHHHHHHhcCc
Confidence 76 7889999999999999999999987 8999999999999999985332 146899999999999998
Q ss_pred cccccccceeeeCCe
Q psy11190 231 LGEAHNGGFFEYTGK 245 (248)
Q Consensus 231 ~~~~~~g~~~~~~g~ 245 (248)
.....+|+.+.+.+.
T Consensus 228 ~~~~~tG~~i~v~~g 242 (251)
T 3orf_A 228 DSRPTNGSLVKFETK 242 (251)
T ss_dssp GGCCCTTCEEEEEEE
T ss_pred cccCCcceEEEEecC
Confidence 778899999887543
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-36 Score=252.32 Aligned_cols=225 Identities=27% Similarity=0.370 Sum_probs=189.8
Q ss_pred CceEEEecCCCchhHHHHHHHHh-CCCCCCceEEEeecCchhHHHHHH-HHhhcCCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVG-LGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~-~g~~~~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
+|++|||||++|||++++++|++ +| ++|++++|+.++.+++.+ +...+.++.++.+|++|.++ ++.+++++.+
T Consensus 4 ~k~vlITGasggIG~~~a~~L~~~~g----~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~-~~~~~~~~~~ 78 (276)
T 1wma_A 4 IHVALVTGGNKGIGLAIVRDLCRLFS----GDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQS-IRALRDFLRK 78 (276)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHHSS----SEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHH-HHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHhcC----CeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHH-HHHHHHHHHH
Confidence 57999999999999999999999 89 899999999887777643 33335578999999999999 9999999999
Q ss_pred hhcCCCccEEEeccccCCccccCCCCC-hhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCC
Q psy11190 79 VVKDQGLNVLVNNAGIAAKFTRLGLLK-PEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIM 157 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~~~~~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~ 157 (248)
.++ ++|+||||||.... .. ...+ .+++++.+++|+.+++++++.+++.|.+ .++||++||..
T Consensus 79 ~~g--~id~li~~Ag~~~~-~~-~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-------------~g~iv~~sS~~ 141 (276)
T 1wma_A 79 EYG--GLDVLVNNAGIAFK-VA-DPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP-------------QGRVVNVSSIM 141 (276)
T ss_dssp HHS--SEEEEEECCCCCCC-TT-CCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE-------------EEEEEEECCHH
T ss_pred hcC--CCCEEEECCccccc-CC-CccccHHHHHhhhheeeeeHHHHHHHHHHhhCC-------------CCEEEEECChh
Confidence 887 59999999998653 22 2334 5889999999999999999999998854 47899999988
Q ss_pred CcccccC--------------------------------------CCCCccchhhHHHHHHHHHHHHhhccC----CCeE
Q psy11190 158 GSIEDNT--------------------------------------QGGFHPYRCSKAALNAATRSLSIDLKG----DKII 195 (248)
Q Consensus 158 ~~~~~~~--------------------------------------~~~~~~y~~sK~a~~~~~~~la~e~~~----~~i~ 195 (248)
+..+... ..+...|+++|++++.|++.++.++++ +||+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~ 221 (276)
T 1wma_A 142 SVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKIL 221 (276)
T ss_dssp HHHHHHTSCHHHHHHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCE
T ss_pred hhcccccCChhHHhhccccccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceE
Confidence 7643100 012378999999999999999999987 7999
Q ss_pred EEEecCcceecCCCCCCCCCchhhHHHHHHHHhhhc--ccccccceeeeCCeecC
Q psy11190 196 ATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQSL--GEAHNGGFFEYTGKAIK 248 (248)
Q Consensus 196 v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~~~~~g~~~~ 248 (248)
|++|+||+++|+|.+.....+|+++++.++.++..+ ....+|+++. +|+++|
T Consensus 222 v~~v~PG~v~t~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~G~~~~-~~~~~~ 275 (276)
T 1wma_A 222 LNACCPGWVRTDMAGPKATKSPEEGAETPVYLALLPPDAEGPHGQFVS-EKRVEQ 275 (276)
T ss_dssp EEEEECCSBCSTTTCTTCSBCHHHHTHHHHHHHSCCTTCCCCCSCEEE-TTEEEC
T ss_pred EEEecCCccccCcCCccccCChhHhhhhHhhhhcCcccccccCceEec-cCceec
Confidence 999999999999988777889999999999999755 3578999998 887765
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-36 Score=257.35 Aligned_cols=218 Identities=19% Similarity=0.258 Sum_probs=185.3
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEee---------cCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATC---------RNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVL 72 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~---------r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~ 72 (248)
|++|||||++|||+++|++|+++| ++|++.+ |+.++++++.+.+...+. ...+|+++.++ ++++
T Consensus 10 k~~lVTGas~GIG~~~a~~La~~G----a~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~--~~~~D~~~~~~-~~~~ 82 (319)
T 1gz6_A 10 RVVLVTGAGGGLGRAYALAFAERG----ALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGG--KAVANYDSVEA-GEKL 82 (319)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT----CEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTC--EEEEECCCGGG-HHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC----CEEEEEcCCcccccccCCHHHHHHHHHHHHhhCC--eEEEeCCCHHH-HHHH
Confidence 799999999999999999999999 8999964 566666666433332221 23589999999 9999
Q ss_pred HHHhhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEE
Q psy11190 73 FKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVN 152 (248)
Q Consensus 73 ~~~i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~ 152 (248)
++++.+.++ ++|+||||||+... .++.+.+.++|+..+++|+.+++++++.++|.|+++ +.++||+
T Consensus 83 ~~~~~~~~g--~iD~lVnnAG~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-----------~~grIV~ 148 (319)
T 1gz6_A 83 VKTALDTFG--RIDVVVNNAGILRD-RSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQ-----------NYGRIIM 148 (319)
T ss_dssp HHHHHHHTS--CCCEEEECCCCCCC-CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------TCEEEEE
T ss_pred HHHHHHHcC--CCCEEEECCCCCCC-CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----------CCCEEEE
Confidence 999998887 59999999998765 567778999999999999999999999999999886 5789999
Q ss_pred eecCCCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC------CCchhhHHHHHHH
Q psy11190 153 VSSIMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA------PLEVGAATAGIIQ 226 (248)
Q Consensus 153 vss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~------~~~~~~~~~~~~~ 226 (248)
+||..+..+. +++..|+++|+++..|++.|+++++++||+||+|+||++ |++..... ..+|++++..+++
T Consensus 149 vsS~~~~~~~---~~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~~~~~~~~~~~~~~p~dvA~~~~~ 224 (319)
T 1gz6_A 149 TASASGIYGN---FGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTETVMPEDLVEALKPEYVAPLVLW 224 (319)
T ss_dssp ECCHHHHHCC---TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTTGGGSCHHHHHHSCGGGTHHHHHH
T ss_pred ECChhhccCC---CCCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-cccccccCChhhhccCCHHHHHHHHHH
Confidence 9999888776 778899999999999999999999999999999999998 88765422 3579999999999
Q ss_pred HhhhcccccccceeeeCCe
Q psy11190 227 FIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 227 ~~~~~~~~~~g~~~~~~g~ 245 (248)
++++ +...+|+++..+|.
T Consensus 225 l~s~-~~~~tG~~~~v~GG 242 (319)
T 1gz6_A 225 LCHE-SCEENGGLFEVGAG 242 (319)
T ss_dssp HTST-TCCCCSCEEEEETT
T ss_pred HhCc-hhhcCCCEEEECCC
Confidence 8876 34678999988775
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-36 Score=255.69 Aligned_cols=187 Identities=24% Similarity=0.357 Sum_probs=160.7
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecC-----chhHHHHHHHH-hhcCCceeEEeeccCCchhhhhHHHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRN-----KDKAVELLALA-QQHSNLHVIELDVTDFSKQQDVLFKD 75 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~-----~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~v~~~~~~ 75 (248)
|++|||||++|||+++|++|+++| ++|++++|+ .++++++.+.. ..+.++.++++|++|.++ +++++++
T Consensus 6 k~vlVTGas~GIG~aia~~L~~~G----~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~-v~~~~~~ 80 (324)
T 3u9l_A 6 KIILITGASSGFGRLTAEALAGAG----HRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVS-VDRAIDQ 80 (324)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTT----CEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHH-HHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC----CEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHH-HHHHHHH
Confidence 689999999999999999999999 899988776 34445553332 335689999999999999 9999999
Q ss_pred hhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeec
Q psy11190 76 ISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSS 155 (248)
Q Consensus 76 i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss 155 (248)
+.+.++ ++|+||||||+... .++.+.+.++|++.+++|+.|+++++++++|.|+++ +.|+||++||
T Consensus 81 ~~~~~g--~iD~lVnnAG~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~-----------~~g~iV~isS 146 (324)
T 3u9l_A 81 IIGEDG--RIDVLIHNAGHMVF-GPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQ-----------KHGLLIWISS 146 (324)
T ss_dssp HHHHHS--CCSEEEECCCCCBC-SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----------TCEEEEEECC
T ss_pred HHHHcC--CCCEEEECCCcCCC-CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----------CCCEEEEEec
Confidence 999987 69999999998764 778889999999999999999999999999999886 6799999999
Q ss_pred CCCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCC
Q psy11190 156 IMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMG 209 (248)
Q Consensus 156 ~~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~ 209 (248)
.++.... .++...|++||+++++|+++++.|++++||+|++|+||+++|++.
T Consensus 147 ~~~~~~~--~~~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~ 198 (324)
T 3u9l_A 147 SSSAGGT--PPYLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTN 198 (324)
T ss_dssp GGGTSCC--CSSCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC-----
T ss_pred chhccCC--CCcchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCch
Confidence 9987543 155678999999999999999999999999999999999998764
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-36 Score=253.00 Aligned_cols=223 Identities=22% Similarity=0.242 Sum_probs=191.3
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHH-hh-cCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALA-QQ-HSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~-~~-~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|++|||||++|||++++++|+++| ++|++++|+.++++++.+.+ .. +.++.++++|++|.++ ++.+++.+.+.
T Consensus 27 k~vlITGasggiG~~la~~L~~~G----~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~-~~~~~~~~~~~ 101 (302)
T 1w6u_A 27 KVAFITGGGTGLGKGMTTLLSSLG----AQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDM-VQNTVSELIKV 101 (302)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHH-HHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHH-HHHHHHHHHHH
Confidence 689999999999999999999999 89999999988877664333 22 4578999999999999 99999999988
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
++ ++|+||||||.... .++.+.+.+++++.+++|+.+++++++.+++.|.++. +.++||++||..+.
T Consensus 102 ~g--~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~----------~~~~iv~isS~~~~ 168 (302)
T 1w6u_A 102 AG--HPNIVINNAAGNFI-SPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQ----------KGAAFLSITTIYAE 168 (302)
T ss_dssp TC--SCSEEEECCCCCCC-SCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT----------CCEEEEEECCTHHH
T ss_pred cC--CCCEEEECCCCCCC-CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhc----------CCCEEEEEcccccc
Confidence 87 59999999998654 6677789999999999999999999999999997431 46899999999887
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecC-CCCCC-----------------CCCchhhHH
Q psy11190 160 IEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTD-MGGSN-----------------APLEVGAAT 221 (248)
Q Consensus 160 ~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~-~~~~~-----------------~~~~~~~~~ 221 (248)
.+. ++...|+++|++++.|++.++.+++++||++++|+||+++|+ +.... ...+|++++
T Consensus 169 ~~~---~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva 245 (302)
T 1w6u_A 169 TGS---GFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELA 245 (302)
T ss_dssp HCC---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTSSCBCHHHHH
T ss_pred cCC---CCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchhhHHHHHhcCCcCCCCCHHHHH
Confidence 766 778899999999999999999999999999999999999997 43221 124799999
Q ss_pred HHHHHHhhhcccccccceeeeCCe
Q psy11190 222 AGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 222 ~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
+.++.++++.....+|+.+.++|.
T Consensus 246 ~~~~~l~~~~~~~~~G~~~~v~gg 269 (302)
T 1w6u_A 246 NLAAFLCSDYASWINGAVIKFDGG 269 (302)
T ss_dssp HHHHHHTSGGGTTCCSCEEEESTT
T ss_pred HHHHHHcCCcccccCCCEEEECCC
Confidence 999999987777789999998885
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-36 Score=245.63 Aligned_cols=195 Identities=21% Similarity=0.212 Sum_probs=173.9
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||++|||+++|++|+++| ++|++.+|+.+ +|++|.++ ++++++++ +
T Consensus 7 k~vlVTGas~gIG~~~a~~l~~~G----~~V~~~~r~~~-------------------~D~~~~~~-v~~~~~~~----g 58 (223)
T 3uce_A 7 TVYVVLGGTSGIGAELAKQLESEH----TIVHVASRQTG-------------------LDISDEKS-VYHYFETI----G 58 (223)
T ss_dssp EEEEEETTTSHHHHHHHHHHCSTT----EEEEEESGGGT-------------------CCTTCHHH-HHHHHHHH----C
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC----CEEEEecCCcc-------------------cCCCCHHH-HHHHHHHh----C
Confidence 689999999999999999999999 99999999864 89999998 88887654 4
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+||||||...+..++.+.+.++|++.+++|+.+++++++.++|.|++ .|+||++||..+..+
T Consensus 59 --~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~-------------~g~iv~~sS~~~~~~ 123 (223)
T 3uce_A 59 --AFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQ-------------GGSITLTSGMLSRKV 123 (223)
T ss_dssp --SEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEE-------------EEEEEEECCGGGTSC
T ss_pred --CCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccC-------------CeEEEEecchhhccC
Confidence 59999999998755578888999999999999999999999999999854 579999999999877
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC-------------------CCchhhHHH
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA-------------------PLEVGAATA 222 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~-------------------~~~~~~~~~ 222 (248)
. ++...|+++|+++++|+++|+.|+++ ||||+|+||+++|++..... ..+|+++++
T Consensus 124 ~---~~~~~Y~asK~a~~~~~~~la~e~~~--i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~ 198 (223)
T 3uce_A 124 V---ANTYVKAAINAAIEATTKVLAKELAP--IRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLPVGKVGEASDIAM 198 (223)
T ss_dssp C---TTCHHHHHHHHHHHHHHHHHHHHHTT--SEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHSTTCSCBCHHHHHH
T ss_pred C---CCchHHHHHHHHHHHHHHHHHHhhcC--cEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcCCCCCccCHHHHHH
Confidence 6 78889999999999999999999987 99999999999999875532 347999999
Q ss_pred HHHHHhhhcccccccceeeeCCee
Q psy11190 223 GIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 223 ~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
.++.+++ ....+|+.+.+||..
T Consensus 199 ~~~~l~~--~~~~tG~~i~vdgG~ 220 (223)
T 3uce_A 199 AYLFAIQ--NSYMTGTVIDVDGGA 220 (223)
T ss_dssp HHHHHHH--CTTCCSCEEEESTTG
T ss_pred HHHHHcc--CCCCCCcEEEecCCe
Confidence 9999887 367899999999863
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-35 Score=252.07 Aligned_cols=221 Identities=16% Similarity=0.193 Sum_probs=191.1
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhh------cCCceeEEeeccCCchhhhhHHHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQ------HSNLHVIELDVTDFSKQQDVLFKD 75 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~v~~~~~~ 75 (248)
|+++||||++|||++++++|+++| ++|++++|+.++++++.+.+.. ..++.++++|++|.++ ++.+++.
T Consensus 19 k~vlVTGasggIG~~la~~l~~~G----~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~-v~~~~~~ 93 (303)
T 1yxm_A 19 QVAIVTGGATGIGKAIVKELLELG----SNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEE-VNNLVKS 93 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHH-HHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHH-HHHHHHH
Confidence 789999999999999999999999 8999999998887776443332 4578999999999999 9999999
Q ss_pred hhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeec
Q psy11190 76 ISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSS 155 (248)
Q Consensus 76 i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss 155 (248)
+.+.++ ++|+||||||.... .++.+.+.+++++.+++|+.+++++++.++|.+.++ ..++||++||
T Consensus 94 ~~~~~g--~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-----------~~~~iv~isS 159 (303)
T 1yxm_A 94 TLDTFG--KINFLVNNGGGQFL-SPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKE-----------HGGSIVNIIV 159 (303)
T ss_dssp HHHHHS--CCCEEEECCCCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHH-----------HCEEEEEECC
T ss_pred HHHHcC--CCCEEEECCCCCCC-CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHh-----------cCCeEEEEEe
Confidence 999887 59999999997654 566778899999999999999999999999965443 3689999999
Q ss_pred CCCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCC--CCCC-----------------CCCc
Q psy11190 156 IMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM--GGSN-----------------APLE 216 (248)
Q Consensus 156 ~~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~--~~~~-----------------~~~~ 216 (248)
.. ..+. ++...|+++|+++.+|+++++.++.++||+|++|+||+++|++ .... ...+
T Consensus 160 ~~-~~~~---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 235 (303)
T 1yxm_A 160 PT-KAGF---PLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGV 235 (303)
T ss_dssp CC-TTCC---TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBC
T ss_pred ec-ccCC---CcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchHHHHHHHhcCcccCCCC
Confidence 88 5554 6778999999999999999999999999999999999999994 2210 1357
Q ss_pred hhhHHHHHHHHhhhcccccccceeeeCCe
Q psy11190 217 VGAATAGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
|+++++.++.++++.....+|+.+.++|.
T Consensus 236 ~~dvA~~i~~l~~~~~~~~~G~~~~v~gG 264 (303)
T 1yxm_A 236 PEEVSSVVCFLLSPAASFITGQSVDVDGG 264 (303)
T ss_dssp THHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHHHHHHHHhCcccccCCCcEEEECCC
Confidence 99999999999988777899999999886
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-35 Score=245.75 Aligned_cols=210 Identities=19% Similarity=0.254 Sum_probs=180.4
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
.|++|||||++|||++++++|+++| ++|++++|+.+.+++ + +.+.++ +|+ .++ ++.+++.+.
T Consensus 19 ~k~vlVTGas~gIG~~~a~~l~~~G----~~V~~~~r~~~~~~~---~----~~~~~~-~D~--~~~-~~~~~~~~~--- 80 (249)
T 1o5i_A 19 DKGVLVLAASRGIGRAVADVLSQEG----AEVTICARNEELLKR---S----GHRYVV-CDL--RKD-LDLLFEKVK--- 80 (249)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTT----CEEEEEESCHHHHHH---T----CSEEEE-CCT--TTC-HHHHHHHSC---
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC----CEEEEEcCCHHHHHh---h----CCeEEE-eeH--HHH-HHHHHHHhc---
Confidence 3789999999999999999999999 899999998743222 1 356667 999 455 777766664
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|.++ +.++||++||..+..
T Consensus 81 ---~iD~lv~~Ag~~~~-~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----------~~g~iv~isS~~~~~ 145 (249)
T 1o5i_A 81 ---EVDILVLNAGGPKA-GFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEK-----------GWGRIVAITSFSVIS 145 (249)
T ss_dssp ---CCSEEEECCCCCCC-BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----------TCEEEEEECCGGGTS
T ss_pred ---CCCEEEECCCCCCC-CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----------CCcEEEEEcchHhcC
Confidence 39999999998754 677788999999999999999999999999999886 578999999999887
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC----------------CCCCchhhHHHHH
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS----------------NAPLEVGAATAGI 224 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~----------------~~~~~~~~~~~~~ 224 (248)
+. ++...|+++|++++.|+++++.|++++||+||+|+||+++|++... ....+|+++++.+
T Consensus 146 ~~---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~i 222 (249)
T 1o5i_A 146 PI---ENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEKKKQVESQIPMRRMAKPEEIASVV 222 (249)
T ss_dssp CC---TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCHHHHHHHHTTSTTSSCBCHHHHHHHH
T ss_pred CC---CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccccchhhHHHHHHhcCCCCCCcCHHHHHHHH
Confidence 76 7788999999999999999999999999999999999999997421 0134799999999
Q ss_pred HHHhhhcccccccceeeeCCee
Q psy11190 225 IQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 225 ~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
+.++++.....+|+++.++|..
T Consensus 223 ~~l~s~~~~~~tG~~~~vdgG~ 244 (249)
T 1o5i_A 223 AFLCSEKASYLTGQTIVVDGGL 244 (249)
T ss_dssp HHHHSGGGTTCCSCEEEESTTC
T ss_pred HHHcCccccCCCCCEEEECCCc
Confidence 9999887788999999999864
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-36 Score=249.44 Aligned_cols=213 Identities=23% Similarity=0.275 Sum_probs=178.5
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCce-EEEeecCchhHHHHHHHHhh--cCCceeEEeeccCC-chhhhhHHHHhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAH-IFATCRNKDKAVELLALAQQ--HSNLHVIELDVTDF-SKQQDVLFKDIS 77 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~-V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~-~~~v~~~~~~i~ 77 (248)
|+++||||++|||++++++|+++| ++ |++++|+.+. +.+.++... ..++.++++|++|. ++ ++.+++++.
T Consensus 6 k~vlVtGas~gIG~~~a~~l~~~G----~~~v~~~~r~~~~-~~~~~l~~~~~~~~~~~~~~D~~~~~~~-~~~~~~~~~ 79 (254)
T 1sby_A 6 KNVIFVAALGGIGLDTSRELVKRN----LKNFVILDRVENP-TALAELKAINPKVNITFHTYDVTVPVAE-SKKLLKKIF 79 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTC----CSEEEEEESSCCH-HHHHHHHHHCTTSEEEEEECCTTSCHHH-HHHHHHHHH
T ss_pred cEEEEECCCChHHHHHHHHHHHCC----CcEEEEEecCchH-HHHHHHHHhCCCceEEEEEEecCCChHH-HHHHHHHHH
Confidence 789999999999999999999999 75 9999998742 222222222 34688999999998 88 999999999
Q ss_pred hhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCC
Q psy11190 78 DVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIM 157 (248)
Q Consensus 78 ~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~ 157 (248)
+.++ ++|+||||||.. +.+++++.+++|+.+++++++.++|.|.++.. ...++||++||.+
T Consensus 80 ~~~g--~id~lv~~Ag~~---------~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~--------~~~g~iv~isS~~ 140 (254)
T 1sby_A 80 DQLK--TVDILINGAGIL---------DDHQIERTIAINFTGLVNTTTAILDFWDKRKG--------GPGGIIANICSVT 140 (254)
T ss_dssp HHHS--CCCEEEECCCCC---------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGT--------CCCEEEEEECCGG
T ss_pred HhcC--CCCEEEECCccC---------CHHHHhhhheeeehhHHHHHHHHHHHHHHhcC--------CCCCEEEEECchh
Confidence 9887 599999999973 45779999999999999999999999976421 0258999999999
Q ss_pred CcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC-----------------CCCchhhH
Q psy11190 158 GSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN-----------------APLEVGAA 220 (248)
Q Consensus 158 ~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~-----------------~~~~~~~~ 220 (248)
+..+. ++...|+++|++++.|+++++.++.++||+|++|+||+++|++.+.. +..+|+++
T Consensus 141 ~~~~~---~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv 217 (254)
T 1sby_A 141 GFNAI---HQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQC 217 (254)
T ss_dssp GTSCC---TTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTTSCCEEHHHH
T ss_pred hccCC---CCchHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhhhhhHHHHHHHhcCCCCCHHHH
Confidence 88776 77889999999999999999999988899999999999999975321 23479999
Q ss_pred HHHHHHHhhhcccccccceeeeCCe
Q psy11190 221 TAGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 221 ~~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
++.++.+++ ...+|++|.++|.
T Consensus 218 A~~i~~~~~---~~~~G~~~~v~gG 239 (254)
T 1sby_A 218 GQNFVKAIE---ANKNGAIWKLDLG 239 (254)
T ss_dssp HHHHHHHHH---HCCTTCEEEEETT
T ss_pred HHHHHHHHH---cCCCCCEEEEeCC
Confidence 999998886 3678999999884
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-36 Score=255.73 Aligned_cols=211 Identities=25% Similarity=0.309 Sum_probs=177.8
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||++|||+++|++|+++| ++|++++|+.++++++.+.. ..++.++++|++|.++ ++++++++ +
T Consensus 17 k~vlVTGas~gIG~~~a~~L~~~G----~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~-v~~~~~~~----~ 85 (291)
T 3rd5_A 17 RTVVITGANSGLGAVTARELARRG----ATVIMAVRDTRKGEAAARTM--AGQVEVRELDLQDLSS-VRRFADGV----S 85 (291)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHTTS--SSEEEEEECCTTCHHH-HHHHHHTC----C
T ss_pred CEEEEeCCCChHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHHh--cCCeeEEEcCCCCHHH-HHHHHHhc----C
Confidence 789999999999999999999999 89999999988877664333 4578999999999999 88887776 3
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+||||||+..+ ..+.+.++|++.+++|+.+++++++.++|.|.+ +||++||.++..+
T Consensus 86 --~iD~lv~nAg~~~~---~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~---------------riv~isS~~~~~~ 145 (291)
T 3rd5_A 86 --GADVLINNAGIMAV---PYALTVDGFESQIGTNHLGHFALTNLLLPRLTD---------------RVVTVSSMAHWPG 145 (291)
T ss_dssp --CEEEEEECCCCCSC---CCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEE---------------EEEEECCGGGTTC
T ss_pred --CCCEEEECCcCCCC---cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh---------------heeEeechhhccC
Confidence 59999999998643 356788999999999999999999999999743 6999999988765
Q ss_pred c----------cCCCCCccchhhHHHHHHHHHHHHhhccCCC--eEEEEecCcceecCCCCCCC---------------C
Q psy11190 162 D----------NTQGGFHPYRCSKAALNAATRSLSIDLKGDK--IIATAMHPGWVKTDMGGSNA---------------P 214 (248)
Q Consensus 162 ~----------~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~--i~v~~v~PG~v~t~~~~~~~---------------~ 214 (248)
. .+.++...|++||++++.|++.++.+++++| |+||+|+||+++|+|.+... .
T Consensus 146 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~ 225 (291)
T 3rd5_A 146 RINLEDLNWRSRRYSPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRKLGDALMSAATRVVA 225 (291)
T ss_dssp CCCSSCTTCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC--------------------C
T ss_pred CCCcccccccccCCCCcchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccchHHHHHHHHHHHHHHh
Confidence 3 1124556899999999999999999999877 99999999999999976532 1
Q ss_pred CchhhHHHHHHHHhhhcccccccceeeeCCe
Q psy11190 215 LEVGAATAGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
.+|+++++.++.++++ +..+|+++.++|.
T Consensus 226 ~~~~~~A~~~~~l~~~--~~~~G~~~~vdgG 254 (291)
T 3rd5_A 226 TDADFGARQTLYAASQ--DLPGDSFVGPRFG 254 (291)
T ss_dssp HHHHHHHHHHHHHHHS--CCCTTCEEEETTS
T ss_pred CCHHHHHHHHHHHHcC--CCCCCceeCCccc
Confidence 2599999999999988 4789999999874
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-35 Score=248.71 Aligned_cols=210 Identities=24% Similarity=0.262 Sum_probs=183.7
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHH-HHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|++|||||++|||++++++|+++| ++|++++|+.++.+++.+ +...+.++.++++|++|.++ ++.+++++.+.+
T Consensus 32 k~vlITGasggIG~~la~~L~~~G----~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~-v~~~~~~~~~~~ 106 (272)
T 1yb1_A 32 EIVLITGAGHGIGRLTAYEFAKLK----SKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNRED-IYSSAKKVKAEI 106 (272)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH-HHHHHHHHHHHT
T ss_pred CEEEEECCCchHHHHHHHHHHHCC----CEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHH-HHHHHHHHHHHC
Confidence 789999999999999999999999 899999999888777643 33335578999999999999 999999999888
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+ ++|+||||||.... .++.+.+.+++++.+++|+.+++++++.++|.|.++ +.++||++||..+..
T Consensus 107 g--~iD~li~~Ag~~~~-~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-----------~~~~iv~isS~~~~~ 172 (272)
T 1yb1_A 107 G--DVSILVNNAGVVYT-SDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKN-----------NHGHIVTVASAAGHV 172 (272)
T ss_dssp C--CCSEEEECCCCCCC-CCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----------TCEEEEEECCCC-CC
T ss_pred C--CCcEEEECCCcCCC-cchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----------CCCEEEEEechhhcC
Confidence 7 59999999998764 666677889999999999999999999999999875 578999999999887
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhcc---CCCeEEEEecCcceecCCCCCC-----CCCchhhHHHHHHHHhhhcc
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLK---GDKIIATAMHPGWVKTDMGGSN-----APLEVGAATAGIIQFIQSLG 232 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~---~~~i~v~~v~PG~v~t~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 232 (248)
+. ++...|+++|++++.|++.++.|+. ++||+|++|.||+++|++.+.. ...+|+++++.++..+....
T Consensus 173 ~~---~~~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~dva~~i~~~~~~~~ 249 (272)
T 1yb1_A 173 SV---PFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNPSTSLGPTLEPEEVVNRLMHGILTEQ 249 (272)
T ss_dssp CH---HHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCTHHHHCCCCCHHHHHHHHHHHHHTTC
T ss_pred CC---CCchhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCccccccccccCCCCHHHHHHHHHHHHHcCC
Confidence 66 6678899999999999999999997 6799999999999999996532 35789999999999997754
Q ss_pred c
Q psy11190 233 E 233 (248)
Q Consensus 233 ~ 233 (248)
.
T Consensus 250 ~ 250 (272)
T 1yb1_A 250 K 250 (272)
T ss_dssp S
T ss_pred C
Confidence 3
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-35 Score=247.64 Aligned_cols=222 Identities=24% Similarity=0.295 Sum_probs=187.1
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhh-c--CCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQ-H--SNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~-~--~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
|++|||||++|||++++++|+++| ++|++++|+.++++++.+.+.. + .++.++++|++|.++ ++.+++++.+
T Consensus 33 k~vlVTGasggIG~~la~~l~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-v~~~~~~~~~ 107 (279)
T 1xg5_A 33 RLALVTGASGGIGAAVARALVQQG----LKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEED-ILSMFSAIRS 107 (279)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHH-HHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCC----CEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHH-HHHHHHHHHH
Confidence 789999999999999999999999 8999999998887776443332 2 357889999999999 9999999998
Q ss_pred hhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 79 VVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
.++ ++|+||||||.... .++.+.+.++|++.+++|+.+++++++.+++.|++++. ..++||++||..+
T Consensus 108 ~~g--~iD~vi~~Ag~~~~-~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~---------~~g~iv~isS~~~ 175 (279)
T 1xg5_A 108 QHS--GVDICINNAGLARP-DTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNV---------DDGHIININSMSG 175 (279)
T ss_dssp HHC--CCSEEEECCCCCCC-CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC---------CSCEEEEECCGGG
T ss_pred hCC--CCCEEEECCCCCCC-CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC---------CCceEEEEcChhh
Confidence 887 59999999998764 67778899999999999999999999999999987520 1489999999987
Q ss_pred cccccCCCCCccchhhHHHHHHHHHHHHhhcc--CCCeEEEEecCcceecCCCCC---------------CCCCchhhHH
Q psy11190 159 SIEDNTQGGFHPYRCSKAALNAATRSLSIDLK--GDKIIATAMHPGWVKTDMGGS---------------NAPLEVGAAT 221 (248)
Q Consensus 159 ~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~--~~~i~v~~v~PG~v~t~~~~~---------------~~~~~~~~~~ 221 (248)
... .+.++...|+++|++++.|++.++.|++ ++||++++|+||+++|++... ....+|++++
T Consensus 176 ~~~-~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA 254 (279)
T 1xg5_A 176 HRV-LPLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATYEQMKCLKPEDVA 254 (279)
T ss_dssp TSC-CSCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHHHHHC---CBCHHHHH
T ss_pred ccc-CCCCCCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhhhcccChhHHhhhcccccCCCHHHHH
Confidence 621 1125677899999999999999999998 889999999999999997311 1246899999
Q ss_pred HHHHHHhhhcccccccceee
Q psy11190 222 AGIIQFIQSLGEAHNGGFFE 241 (248)
Q Consensus 222 ~~~~~~~~~~~~~~~g~~~~ 241 (248)
+.++.+++.+....+|.+.-
T Consensus 255 ~~i~~l~~~~~~~~~g~i~i 274 (279)
T 1xg5_A 255 EAVIYVLSTPAHIQIGDIQM 274 (279)
T ss_dssp HHHHHHHHSCTTEEEEEEEE
T ss_pred HHHHHHhcCCcceEeeeEEE
Confidence 99999999877777776544
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-35 Score=243.06 Aligned_cols=216 Identities=25% Similarity=0.344 Sum_probs=184.9
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||++|||++++++|+++| ++|++++|+.++++++.+.. ....++++|++|.++ ++++++ .++
T Consensus 8 k~vlITGasggiG~~~a~~l~~~G----~~V~~~~r~~~~~~~~~~~~---~~~~~~~~D~~~~~~-~~~~~~----~~~ 75 (244)
T 3d3w_A 8 RRVLVTGAGKGIGRGTVQALHATG----ARVVAVSRTQADLDSLVREC---PGIEPVCVDLGDWEA-TERALG----SVG 75 (244)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHS---TTCEEEECCTTCHHH-HHHHHT----TCC
T ss_pred cEEEEECCCcHHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHc---CCCCEEEEeCCCHHH-HHHHHH----HcC
Confidence 789999999999999999999999 89999999987766553322 356778999999988 777765 333
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCC-CceEEEeecCCCcc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSS-RAAIVNVSSIMGSI 160 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~-~~~iv~vss~~~~~ 160 (248)
++|+||||||.... .++.+.+.++|++.+++|+.+++++++.+++.|.++ + .++||++||..+..
T Consensus 76 --~id~vi~~Ag~~~~-~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-----------~~~~~iv~~sS~~~~~ 141 (244)
T 3d3w_A 76 --PVDLLVNNAAVALL-QPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIAR-----------GVPGAIVNVSSQCSQR 141 (244)
T ss_dssp --CCCEEEECCCCCCC-BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----------TCCEEEEEECCGGGTS
T ss_pred --CCCEEEECCccCCC-cchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-----------CCCcEEEEeCchhhcc
Confidence 59999999998754 667778899999999999999999999999999875 3 68999999999887
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC-----C------------CCCchhhHHHH
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS-----N------------APLEVGAATAG 223 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~-----~------------~~~~~~~~~~~ 223 (248)
+. ++...|+++|++++.|++.++.|++++||++++|+||+++|++... . ...+|+++++.
T Consensus 142 ~~---~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~ 218 (244)
T 3d3w_A 142 AV---TNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNA 218 (244)
T ss_dssp CC---TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCSTTHHHHHHHTCTTCSCBCHHHHHHH
T ss_pred CC---CCCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccChHHHHHHHhhCCCCCCcCHHHHHHH
Confidence 66 7788999999999999999999999999999999999999987431 0 13579999999
Q ss_pred HHHHhhhcccccccceeeeCCee
Q psy11190 224 IIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 224 ~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
++.++++.....+|+.+.++|..
T Consensus 219 ~~~l~~~~~~~~~G~~~~v~gG~ 241 (244)
T 3d3w_A 219 ILFLLSDRSGMTTGSTLPVEGGF 241 (244)
T ss_dssp HHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHcCccccCCCCCEEEECCCc
Confidence 99999877777899999998863
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-36 Score=258.12 Aligned_cols=207 Identities=21% Similarity=0.221 Sum_probs=172.5
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHh-------hcCCceeEEeeccCCchhhhhHH
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQ-------QHSNLHVIELDVTDFSKQQDVLF 73 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~-------~~~~~~~~~~D~~~~~~~v~~~~ 73 (248)
.|++|||||++|||++++++|+++| ++|++++|+.++++...+... ...++.++++|++|.++ ++.++
T Consensus 2 ~k~vlVTGas~GIG~ala~~L~~~G----~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~-v~~~~ 76 (327)
T 1jtv_A 2 RTVVLITGCSSGIGLHLAVRLASDP----SQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKS-VAAAR 76 (327)
T ss_dssp CEEEEESCCSSHHHHHHHHHHHTCT----TCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHH-HHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC----CceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHH-HHHHH
Confidence 3789999999999999999999999 788888887655443322211 12578899999999999 99998
Q ss_pred HHhhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEe
Q psy11190 74 KDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNV 153 (248)
Q Consensus 74 ~~i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~v 153 (248)
+++. .+ ++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|+++ +.++||++
T Consensus 77 ~~~~--~g--~iD~lVnnAG~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~-----------~~g~IV~i 140 (327)
T 1jtv_A 77 ERVT--EG--RVDVLVCNAGLGLL-GPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRR-----------GSGRVLVT 140 (327)
T ss_dssp HTCT--TS--CCSEEEECCCCCCC-SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----------TCEEEEEE
T ss_pred HHHh--cC--CCCEEEECCCcCCC-CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----------CCCEEEEE
Confidence 8884 24 69999999998654 667788999999999999999999999999999875 57999999
Q ss_pred ecCCCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC--------------------
Q psy11190 154 SSIMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA-------------------- 213 (248)
Q Consensus 154 ss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~-------------------- 213 (248)
||.++..+. +....|++||+++++|+++|+.|++++||+||+|+||+++|+|.....
T Consensus 141 sS~~~~~~~---~~~~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (327)
T 1jtv_A 141 GSVGGLMGL---PFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQ 217 (327)
T ss_dssp EEGGGTSCC---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHH
T ss_pred CCcccccCC---CCChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHHhhhhhcchhhhccCCHHHHHHHHH
Confidence 999998776 778899999999999999999999999999999999999999965421
Q ss_pred ------------CCchhhHHHHHHHHhhhc
Q psy11190 214 ------------PLEVGAATAGIIQFIQSL 231 (248)
Q Consensus 214 ------------~~~~~~~~~~~~~~~~~~ 231 (248)
..+|+++++.++.++...
T Consensus 218 ~~~~~~~~~~~~~~~pedvA~~i~~l~~~~ 247 (327)
T 1jtv_A 218 YLAHSKQVFREAAQNPEEVAEVFLTALRAP 247 (327)
T ss_dssp HHHHHHHHHHHHCBCHHHHHHHHHHHHHCS
T ss_pred HHHHHHHhhhhcCCCHHHHHHHHHHHHcCC
Confidence 247999999999998763
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-35 Score=247.51 Aligned_cols=215 Identities=26% Similarity=0.330 Sum_probs=181.1
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhh---cCCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQ---HSNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
|++|||||++|||++++++|+++| ++|++++|+.++++++.+.+.. ..++.++++|++|.++ ++.+++.+.+
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G----~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~-v~~~~~~~~~ 82 (267)
T 2gdz_A 8 KVALVTGAAQGIGRAFAEALLLKG----AKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQ-LRDTFRKVVD 82 (267)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHH-HHHHHHHHHH
T ss_pred CEEEEECCCCcHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHH-HHHHHHHHHH
Confidence 689999999999999999999999 8999999998877666433322 3467889999999999 9999999999
Q ss_pred hhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 79 VVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
.++ ++|+||||||... .++|++.+++|+.+++.+++.++|.|.+++. .+.++||++||..+
T Consensus 83 ~~g--~id~lv~~Ag~~~---------~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--------~~~g~iv~isS~~~ 143 (267)
T 2gdz_A 83 HFG--RLDILVNNAGVNN---------EKNWEKTLQINLVSVISGTYLGLDYMSKQNG--------GEGGIIINMSSLAG 143 (267)
T ss_dssp HHS--CCCEEEECCCCCC---------SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGT--------CCCEEEEEECCGGG
T ss_pred HcC--CCCEEEECCCCCC---------hhhHHHHHhHHHHHHHHHHHHHHHHHHhccC--------CCCCEEEEeCCccc
Confidence 888 5999999999642 4678999999999999999999999977421 02589999999998
Q ss_pred cccccCCCCCccchhhHHHHHHHHHHH--HhhccCCCeEEEEecCcceecCCCCCC-----------------------C
Q psy11190 159 SIEDNTQGGFHPYRCSKAALNAATRSL--SIDLKGDKIIATAMHPGWVKTDMGGSN-----------------------A 213 (248)
Q Consensus 159 ~~~~~~~~~~~~y~~sK~a~~~~~~~l--a~e~~~~~i~v~~v~PG~v~t~~~~~~-----------------------~ 213 (248)
..+. ++...|+++|++++.|++++ +.+++++||+||+|+||+++|++.... .
T Consensus 144 ~~~~---~~~~~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (267)
T 2gdz_A 144 LMPV---AQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYG 220 (267)
T ss_dssp TSCC---TTCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHC
T ss_pred cCCC---CCCchHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhccccccccchhhhHHHHHHHHhcccc
Confidence 8766 77889999999999999995 688999999999999999999874321 1
Q ss_pred CCchhhHHHHHHHHhhhcccccccceeeeCCe
Q psy11190 214 PLEVGAATAGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
..+|+++++.++.++++. ..+|+.+..+|.
T Consensus 221 ~~~~~dvA~~v~~l~s~~--~~~G~~~~v~gg 250 (267)
T 2gdz_A 221 ILDPPLIANGLITLIEDD--ALNGAIMKITTS 250 (267)
T ss_dssp CBCHHHHHHHHHHHHHCT--TCSSCEEEEETT
T ss_pred CCCHHHHHHHHHHHhcCc--CCCCcEEEecCC
Confidence 348999999999999874 378887777663
|
| >3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-36 Score=262.53 Aligned_cols=209 Identities=13% Similarity=0.056 Sum_probs=174.5
Q ss_pred CceEEEecCCCchhHHHHHHHHh-CCCCCCceEEEeecCchhHH------------HH-HHHHhhcCCceeEEeeccCCc
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVG-LGNNQPAHIFATCRNKDKAV------------EL-LALAQQHSNLHVIELDVTDFS 66 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~-~g~~~~~~V~~~~r~~~~~~------------~~-~~~~~~~~~~~~~~~D~~~~~ 66 (248)
.|++|||||++|||+++|+.|++ +| ++|++++|+.+.++ .+ ..+...+.++..+.+|++|.+
T Consensus 61 gKvaLVTGASsGIG~AiA~~LA~~~G----A~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~ 136 (422)
T 3s8m_A 61 PKKVLVIGASSGYGLASRITAAFGFG----ADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDA 136 (422)
T ss_dssp CSEEEEESCSSHHHHHHHHHHHHHHC----CEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHH
T ss_pred CCEEEEECCChHHHHHHHHHHHHhCC----CEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHH
Confidence 37999999999999999999999 99 89999999876532 12 223334557889999999999
Q ss_pred hhhhhHHHHhhhhh-cCCCccEEEeccccC------------CccccC---------------------CCCChhhhhhe
Q psy11190 67 KQQDVLFKDISDVV-KDQGLNVLVNNAGIA------------AKFTRL---------------------GLLKPEQMTDH 112 (248)
Q Consensus 67 ~~v~~~~~~i~~~~-~~~~iD~lv~~ag~~------------~~~~~~---------------------~~~~~~~~~~~ 112 (248)
+ ++++++.+.+.+ | ++|+||||||.. ....++ .+.+.++|++.
T Consensus 137 ~-v~~~v~~i~~~~~G--~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~ 213 (422)
T 3s8m_A 137 A-RAQVIELIKTEMGG--QVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDT 213 (422)
T ss_dssp H-HHHHHHHHHHHSCS--CEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHH
T ss_pred H-HHHHHHHHHHHcCC--CCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHH
Confidence 9 999999999999 7 699999999872 111333 36789999999
Q ss_pred eeecchhhH-HHHHHHhHH-HHhhhhcccCCCCCCCCceEEEeecCCCcccccCCCCC--ccchhhHHHHHHHHHHHHhh
Q psy11190 113 FLVNVTAPL-MLTKTMLPL-LKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGF--HPYRCSKAALNAATRSLSID 188 (248)
Q Consensus 113 ~~~n~~~~~-~l~~~~~~~-l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~~~~~~~~--~~y~~sK~a~~~~~~~la~e 188 (248)
+++|..+.+ .+++.+++. |.+ ..|+||++||..+..+. +.+ ..|++||+++.+|+++|+.|
T Consensus 214 v~Vn~~~~~~~~~~a~~~~~m~~------------~gG~IVniSSi~g~~~~---p~~~~~aY~ASKaAl~~lTrsLA~E 278 (422)
T 3s8m_A 214 ITVMGGQDWELWIDALEGAGVLA------------DGARSVAFSYIGTEITW---PIYWHGALGKAKVDLDRTAQRLNAR 278 (422)
T ss_dssp HHHHSSHHHHHHHHHHHHTTCEE------------EEEEEEEEEECCCGGGH---HHHTSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhchhHHHHHHHHHHHHHHhh------------CCCEEEEEeCchhhccC---CCccchHHHHHHHHHHHHHHHHHHH
Confidence 999999887 778887654 433 36899999999998776 544 88999999999999999999
Q ss_pred ccCCCeEEEEecCcceecCCCCCCC---------------CCchhhHHHHHHHHhhhc
Q psy11190 189 LKGDKIIATAMHPGWVKTDMGGSNA---------------PLEVGAATAGIIQFIQSL 231 (248)
Q Consensus 189 ~~~~~i~v~~v~PG~v~t~~~~~~~---------------~~~~~~~~~~~~~~~~~~ 231 (248)
|+++|||||+|+||+++|++....+ ...||+++..+.+++++.
T Consensus 279 la~~GIRVNaVaPG~i~T~~~~~ip~~~~~~~~~~~~m~r~G~pEdva~~v~~L~sd~ 336 (422)
T 3s8m_A 279 LAKHGGGANVAVLKSVVTQASAAIPVMPLYISMVYKIMKEKGLHEGTIEQLDRLFRER 336 (422)
T ss_dssp HHTTTCEEEEEEECCCCCTTGGGSTHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHT
T ss_pred hCccCEEEEEEEcCCCcChhhhcCCCChHHHHHHHhhhcCCcChHHHHHHHHHHhcch
Confidence 9999999999999999999986543 356899999999999874
|
| >3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-36 Score=258.03 Aligned_cols=208 Identities=11% Similarity=0.062 Sum_probs=175.2
Q ss_pred CceEEEecCCCchhHHHHHHHHh-CCCCCCceEEEeecCchhHH------------HHH-HHHhhcCCceeEEeeccCCc
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVG-LGNNQPAHIFATCRNKDKAV------------ELL-ALAQQHSNLHVIELDVTDFS 66 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~-~g~~~~~~V~~~~r~~~~~~------------~~~-~~~~~~~~~~~~~~D~~~~~ 66 (248)
.|++|||||++|||+++|+.|++ +| ++|++++|+.+..+ .+. .+...+.++..+.+|++|.+
T Consensus 47 gKvaLVTGas~GIG~AiA~~LA~g~G----A~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~ 122 (405)
T 3zu3_A 47 PKRVLVIGASTGYGLAARITAAFGCG----ADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDE 122 (405)
T ss_dssp CSEEEEESCSSHHHHHHHHHHHHHHC----CEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHH
T ss_pred CCEEEEeCcchHHHHHHHHHHHHhcC----CEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHH
Confidence 37999999999999999999999 99 89999998765432 222 22334557889999999999
Q ss_pred hhhhhHHHHhhhhhcCCCccEEEeccccCC------------ccccC---------------------CCCChhhhhhee
Q psy11190 67 KQQDVLFKDISDVVKDQGLNVLVNNAGIAA------------KFTRL---------------------GLLKPEQMTDHF 113 (248)
Q Consensus 67 ~~v~~~~~~i~~~~~~~~iD~lv~~ag~~~------------~~~~~---------------------~~~~~~~~~~~~ 113 (248)
+ ++++++.+.+.+| ++|+||||||... ..+++ .+.+.++|++.+
T Consensus 123 ~-v~~~v~~i~~~~G--~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v 199 (405)
T 3zu3_A 123 I-KQLTIDAIKQDLG--QVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTV 199 (405)
T ss_dssp H-HHHHHHHHHHHTS--CEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHH
T ss_pred H-HHHHHHHHHHHcC--CCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHH
Confidence 9 9999999999998 6999999999741 11344 678999999999
Q ss_pred eecchhhH-HHHHHHhHH-HHhhhhcccCCCCCCCCceEEEeecCCCcccccCCCCC--ccchhhHHHHHHHHHHHHhhc
Q psy11190 114 LVNVTAPL-MLTKTMLPL-LKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGF--HPYRCSKAALNAATRSLSIDL 189 (248)
Q Consensus 114 ~~n~~~~~-~l~~~~~~~-l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~~~~~~~~--~~y~~sK~a~~~~~~~la~e~ 189 (248)
++|..+.+ ++++++++. |.+ ..|+||++||+.+..+. +.+ ..|++||+++.+|+++|+.||
T Consensus 200 ~Vn~~~~~~~~~~~~~~~~m~~------------~gG~IVniSSi~~~~~~---p~~~~~aY~AaKaal~~ltrsLA~El 264 (405)
T 3zu3_A 200 AVMGGEDWQMWIDALLDAGVLA------------EGAQTTAFTYLGEKITH---DIYWNGSIGAAKKDLDQKVLAIRESL 264 (405)
T ss_dssp HHHSSHHHHHHHHHHHHHTCEE------------EEEEEEEEECCCCGGGT---TTTTTSHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhchhHHHHHHHHHHHHhhhh------------CCcEEEEEeCchhhCcC---CCccchHHHHHHHHHHHHHHHHHHHh
Confidence 99999998 788877654 443 36899999999998876 666 899999999999999999999
Q ss_pred cCC-CeEEEEecCcceecCCCCCCC---------------CCchhhHHHHHHHHhhh
Q psy11190 190 KGD-KIIATAMHPGWVKTDMGGSNA---------------PLEVGAATAGIIQFIQS 230 (248)
Q Consensus 190 ~~~-~i~v~~v~PG~v~t~~~~~~~---------------~~~~~~~~~~~~~~~~~ 230 (248)
+++ |||||+|.||+++|++....+ ...+|+++.++..+.++
T Consensus 265 a~~~GIRVNaVaPG~i~T~~s~~ip~~p~y~~~l~~~mkr~G~~Ed~a~~i~~L~sd 321 (405)
T 3zu3_A 265 AAHGGGDARVSVLKAVVSQASSAIPMMPLYLSLLFKVMKEKGTHEGCIEQVYSLYKD 321 (405)
T ss_dssp HTTTSCEEEEEECCCCCCHHHHTSTTHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHH
T ss_pred CcccCeEEEEEEeCCCcCchhhcCCCCcHHHHHHHHHHhcCCCcHHHHHHHHHHHhc
Confidence 999 999999999999999876543 25689999999999987
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-35 Score=246.70 Aligned_cols=221 Identities=24% Similarity=0.269 Sum_probs=190.8
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeec-CchhHHHHHH-HHhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCR-NKDKAVELLA-LAQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r-~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|++|||||++|||++++++|+++| ++|++++| +.++++++.+ +...+.++.++++|++|.++ ++.+++++.+.
T Consensus 22 k~vlItGasggiG~~la~~l~~~G----~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~ 96 (274)
T 1ja9_A 22 KVALTTGAGRGIGRGIAIELGRRG----ASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSE-VVALFDKAVSH 96 (274)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT----CEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHH-HHHHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC----CEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHH-HHHHHHHHHHH
Confidence 689999999999999999999999 89999999 7666666633 33335678899999999999 99999999998
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
++ ++|+||||||.... .++.+.+.++|++.+++|+.+++++++.+++.|++ + ++||++||..+.
T Consensus 97 ~~--~~d~vi~~Ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~------------~-~~iv~~sS~~~~ 160 (274)
T 1ja9_A 97 FG--GLDFVMSNSGMEVW-CDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRR------------G-GRIILTSSIAAV 160 (274)
T ss_dssp HS--CEEEEECCCCCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEE------------E-EEEEEECCGGGT
T ss_pred cC--CCCEEEECCCCCCC-cccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh------------C-CEEEEEcChHhc
Confidence 87 59999999998754 66677899999999999999999999999999863 3 799999999887
Q ss_pred -ccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCC------------CC--------------
Q psy11190 160 -IEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGG------------SN-------------- 212 (248)
Q Consensus 160 -~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~------------~~-------------- 212 (248)
.+. ++...|+++|++++.|++.++.+++++||++++|.||+++|++.. ..
T Consensus 161 ~~~~---~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (274)
T 1ja9_A 161 MTGI---PNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNP 237 (274)
T ss_dssp CCSC---CSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTST
T ss_pred cCCC---CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHhcCC
Confidence 554 677899999999999999999999999999999999999998643 11
Q ss_pred --CCCchhhHHHHHHHHhhhcccccccceeeeCCee
Q psy11190 213 --APLEVGAATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 213 --~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
....++++++.++.++++.....+|+.+.++|..
T Consensus 238 ~~~~~~~~dva~~i~~l~~~~~~~~~G~~~~v~gG~ 273 (274)
T 1ja9_A 238 LKRIGYPADIGRAVSALCQEESEWINGQVIKLTGGG 273 (274)
T ss_dssp TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred CCCccCHHHHHHHHHHHhCcccccccCcEEEecCCc
Confidence 1347999999999999877677899999999864
|
| >2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-36 Score=255.08 Aligned_cols=221 Identities=16% Similarity=0.149 Sum_probs=179.3
Q ss_pred ceEEEecC--CCchhHHHHHHHHhCCCCCCceEEEeecCch-----------hHHHHHHHHhhcC---CceeE-------
Q psy11190 2 KSILITGC--NRGLGLGMIKVLVGLGNNQPAHIFATCRNKD-----------KAVELLALAQQHS---NLHVI------- 58 (248)
Q Consensus 2 k~~lVtGa--s~giG~~ia~~l~~~g~~~~~~V~~~~r~~~-----------~~~~~~~~~~~~~---~~~~~------- 58 (248)
|++||||| ++|||+++|++|+++| ++|++++|+.. +++++.++ ..+. .+.++
T Consensus 10 k~~lVTGa~~s~GIG~aia~~la~~G----~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~d~~~~ 84 (315)
T 2o2s_A 10 QTAFVAGVADSHGYGWAIAKHLASAG----ARVALGTWPPVLGLFQKSLQSGRLDEDRKL-PDGSLIEFAGVYPLDAAFD 84 (315)
T ss_dssp CEEEEECCSSSSSHHHHHHHHHHTTT----CEEEEEECHHHHHHHHHHHHHTTTHHHHBC-TTSCBCCCSCEEECCTTCS
T ss_pred CEEEEeCCCCCCChHHHHHHHHHHCC----CEEEEEecccccchhhhhhhhhhhhhhhhh-hcccccccccccccccccc
Confidence 78999999 8999999999999999 89999987641 11221111 1111 12333
Q ss_pred -----EeeccC--------CchhhhhHHHHhhhhhcCCCccEEEeccccCC-ccccCCCCChhhhhheeeecchhhHHHH
Q psy11190 59 -----ELDVTD--------FSKQQDVLFKDISDVVKDQGLNVLVNNAGIAA-KFTRLGLLKPEQMTDHFLVNVTAPLMLT 124 (248)
Q Consensus 59 -----~~D~~~--------~~~~v~~~~~~i~~~~~~~~iD~lv~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~ 124 (248)
.+|++| .++ ++.+++++.+.++ ++|+||||||... ...++.+.+.++|++.+++|+.++++++
T Consensus 85 ~~~~~~~Dv~~~~~~~~~d~~~-v~~~~~~~~~~~g--~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~ 161 (315)
T 2o2s_A 85 KPEDVPQDIKDNKRYAGVDGYT-IKEVAVKVKQDLG--NIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLL 161 (315)
T ss_dssp STTSSCHHHHTCGGGSSCCCCS-HHHHHHHHHHHHC--SEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred ccchhhhhhhcccccccCCHHH-HHHHHHHHHHhcC--CCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHH
Confidence 344554 567 9999999999887 5999999999763 2356778899999999999999999999
Q ss_pred HHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcccccCCCCC-ccchhhHHHHHHHHHHHHhhccC-CCeEEEEecCc
Q psy11190 125 KTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGF-HPYRCSKAALNAATRSLSIDLKG-DKIIATAMHPG 202 (248)
Q Consensus 125 ~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~~~~~~~~-~~y~~sK~a~~~~~~~la~e~~~-~~i~v~~v~PG 202 (248)
+.++|.|.+ .|+||++||.++..+. +++ ..|+++|+++.+|+++|+.|+++ +||+||+|+||
T Consensus 162 ~~~~~~m~~-------------~g~Iv~isS~~~~~~~---~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG 225 (315)
T 2o2s_A 162 QHFGPIMNE-------------GGSAVTLSYLAAERVV---PGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAG 225 (315)
T ss_dssp HHHSTTEEE-------------EEEEEEEEEGGGTSCC---TTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEC
T ss_pred HHHHHHHhc-------------CCEEEEEecccccccC---CCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecc
Confidence 999999964 4899999999988766 666 58999999999999999999985 89999999999
Q ss_pred ceecCCCCCC-----------------------CCCchhhHHHHHHHHhhhcccccccceeeeCCee
Q psy11190 203 WVKTDMGGSN-----------------------APLEVGAATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 203 ~v~t~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
+++|+|.... ...+|+++++.+++++++.....+|+++.+||..
T Consensus 226 ~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~ 292 (315)
T 2o2s_A 226 PLKSRAASAIGKSGEKSFIDYAIDYSYNNAPLRRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGL 292 (315)
T ss_dssp CCCCHHHHHTTCSSSSCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred cccchhhhhccccccchhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhCchhccCcCCEEEECCCe
Confidence 9999863210 1358999999999999988889999999999863
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-35 Score=272.55 Aligned_cols=219 Identities=17% Similarity=0.196 Sum_probs=174.4
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeec---------CchhHHHHHHHHhhcCCceeEEeeccCCchhhhhH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCR---------NKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVL 72 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~ 72 (248)
|++|||||++|||+++|++|+++| ++|++++| +.+.++++.+.+...+. ...+|++|.++ ++++
T Consensus 20 k~~lVTGas~GIG~aiA~~La~~G----a~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~D~~d~~~-~~~~ 92 (613)
T 3oml_A 20 RVAVVTGAGAGLGREYALLFAERG----AKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGG--EAVADYNSVID-GAKV 92 (613)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT----CEEEEC--------------CHHHHHHHHHHTTC--CEEECCCCGGG-HHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC----CEEEEEeCCcccccccCCHHHHHHHHHHHHHhCC--eEEEEeCCHHH-HHHH
Confidence 799999999999999999999999 99999988 66666666443332221 23489999998 9999
Q ss_pred HHHhhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEE
Q psy11190 73 FKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVN 152 (248)
Q Consensus 73 ~~~i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~ 152 (248)
++++.+.++ ++|+||||||+... .++.+.+.++|++.+++|+.+++++++.++|.|+++ +.|+||+
T Consensus 93 ~~~~~~~~g--~iDiLVnnAGi~~~-~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~-----------~~g~IV~ 158 (613)
T 3oml_A 93 IETAIKAFG--RVDILVNNAGILRD-RSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQ-----------NYGRIIM 158 (613)
T ss_dssp HC------------CEECCCCCCCC-CCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----------TCEEEEE
T ss_pred HHHHHHHCC--CCcEEEECCCCCCC-CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----------CCCEEEE
Confidence 999999887 59999999999875 788889999999999999999999999999999986 5799999
Q ss_pred eecCCCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC------CCchhhHHHHHHH
Q psy11190 153 VSSIMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA------PLEVGAATAGIIQ 226 (248)
Q Consensus 153 vss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~------~~~~~~~~~~~~~ 226 (248)
+||.++..+. ++...|++||+++.+|+++|+.|++++||+||+|+||++ |+|+.... ..+|++++..+++
T Consensus 159 isS~a~~~~~---~~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~-t~~~~~~~~~~~~~~~~pedvA~~v~~ 234 (613)
T 3oml_A 159 TSSNSGIYGN---FGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAA-SRMTEGILPDILFNELKPKLIAPVVAY 234 (613)
T ss_dssp ECCHHHHHCC---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------CCCCCHHHHTTCCGGGTHHHHHH
T ss_pred ECCHHHcCCC---CCChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCC-ChhhhhccchhhhhcCCHHHHHHHHHH
Confidence 9999998887 788999999999999999999999999999999999975 66665432 4689999999999
Q ss_pred HhhhcccccccceeeeCCee
Q psy11190 227 FIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 227 ~~~~~~~~~~g~~~~~~g~~ 246 (248)
++++. ...+|+++.++|..
T Consensus 235 L~s~~-~~~tG~~i~vdGG~ 253 (613)
T 3oml_A 235 LCHES-CEDNGSYIESAAGW 253 (613)
T ss_dssp TTSTT-CCCCSCEEEEETTE
T ss_pred hcCCC-cCCCceEEEECCCe
Confidence 98887 77899999998853
|
| >2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-35 Score=253.87 Aligned_cols=222 Identities=16% Similarity=0.192 Sum_probs=159.0
Q ss_pred ceEEEecC--CCchhHHHHHHHHhCCCCCCceEEEeecCc-----------hhHHH-----------HH-HHHhhcC---
Q psy11190 2 KSILITGC--NRGLGLGMIKVLVGLGNNQPAHIFATCRNK-----------DKAVE-----------LL-ALAQQHS--- 53 (248)
Q Consensus 2 k~~lVtGa--s~giG~~ia~~l~~~g~~~~~~V~~~~r~~-----------~~~~~-----------~~-~~~~~~~--- 53 (248)
|++||||| ++|||+++|++|+++| ++|++++|+. +++++ +. ++...+.
T Consensus 10 k~~lVTGa~~s~GIG~aia~~la~~G----~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (319)
T 2ptg_A 10 KTAFVAGVADSNGYGWAICKLLRAAG----ARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDLV 85 (319)
T ss_dssp CEEEEECCCCTTSHHHHHHHHHHHTT----CEEEEEECHHHHHHHHC--------------------------------C
T ss_pred CEEEEeCCCCCCcHHHHHHHHHHHCC----CEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhcccccc
Confidence 68999999 8999999999999999 8999998752 22221 11 1111110
Q ss_pred CceeE------------EeeccC--------CchhhhhHHHHhhhhhcCCCccEEEeccccCC-ccccCCCCChhhhhhe
Q psy11190 54 NLHVI------------ELDVTD--------FSKQQDVLFKDISDVVKDQGLNVLVNNAGIAA-KFTRLGLLKPEQMTDH 112 (248)
Q Consensus 54 ~~~~~------------~~D~~~--------~~~~v~~~~~~i~~~~~~~~iD~lv~~ag~~~-~~~~~~~~~~~~~~~~ 112 (248)
...++ .+|++| .++ ++.+++++.+.++ ++|+||||||... ...++.+.+.++|++.
T Consensus 86 ~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~-v~~~~~~~~~~~g--~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~ 162 (319)
T 2ptg_A 86 FDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFT-ISEVAEAVRADVG--QIDILVHSLANGPEVTKPLLQTSRKGYLAA 162 (319)
T ss_dssp CSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCS-HHHHHHHHHHHHS--CEEEEEEEEECCSSSSSCGGGCCHHHHHHH
T ss_pred ccccccccccccccccccchhcccccccccCHHH-HHHHHHHHHHHcC--CCCEEEECCccCCCCCCccccCCHHHHHHH
Confidence 12333 344554 456 8999999999887 5999999999753 2356778899999999
Q ss_pred eeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcccccCCCCC-ccchhhHHHHHHHHHHHHhhccC
Q psy11190 113 FLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGF-HPYRCSKAALNAATRSLSIDLKG 191 (248)
Q Consensus 113 ~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~~~~~~~~-~~y~~sK~a~~~~~~~la~e~~~ 191 (248)
+++|+.+++++++.++|.|.+ .|+||++||.++..+. +++ ..|+++|+++.+|+++|+.|+++
T Consensus 163 ~~vN~~g~~~l~~~~~~~m~~-------------~g~Iv~isS~~~~~~~---~~~~~~Y~asKaal~~l~~~la~el~~ 226 (319)
T 2ptg_A 163 VSSSSYSFVSLLQHFLPLMKE-------------GGSALALSYIASEKVI---PGYGGGMSSAKAALESDCRTLAFEAGR 226 (319)
T ss_dssp HHHHTHHHHHHHHHHGGGEEE-------------EEEEEEEEECC---------------------THHHHHHHHHHHHH
T ss_pred HhHhhHHHHHHHHHHHHHHhc-------------CceEEEEecccccccc---CccchhhHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999964 4899999999988776 666 68999999999999999999985
Q ss_pred -CCeEEEEecCcceecCCCCCC-----------------------CCCchhhHHHHHHHHhhhcccccccceeeeCCee
Q psy11190 192 -DKIIATAMHPGWVKTDMGGSN-----------------------APLEVGAATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 192 -~~i~v~~v~PG~v~t~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
+||+||+|+||+++|+|.+.. ...+|+++++.+++++++.....+|+++.+||..
T Consensus 227 ~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~ 305 (319)
T 2ptg_A 227 ARAVRVNCISAGPLKSRAASAIGKAGDKTFIDLAIDYSEANAPLQKELESDDVGRAALFLLSPLARAVTGATLYVDNGL 305 (319)
T ss_dssp HHCCEEEEEEECCCC-------------------------------CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred ccCeeEEEEeeCCccChhhhhcccccchhhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhCcccCCccCCEEEECCCc
Confidence 899999999999999985421 1247999999999999988889999999999863
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-35 Score=240.75 Aligned_cols=216 Identities=22% Similarity=0.331 Sum_probs=185.3
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||+||||++++++|+++| ++|++++|+.++++++.+. ...+.++++|++|.++ ++++++ .++
T Consensus 8 ~~vlVTGasggiG~~~a~~l~~~G----~~V~~~~r~~~~~~~~~~~---~~~~~~~~~D~~~~~~-~~~~~~----~~~ 75 (244)
T 1cyd_A 8 LRALVTGAGKGIGRDTVKALHASG----AKVVAVTRTNSDLVSLAKE---CPGIEPVCVDLGDWDA-TEKALG----GIG 75 (244)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHH---STTCEEEECCTTCHHH-HHHHHT----TCC
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHh---ccCCCcEEecCCCHHH-HHHHHH----HcC
Confidence 689999999999999999999999 8999999998776655332 2356778999999888 777665 333
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCC-CceEEEeecCCCcc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSS-RAAIVNVSSIMGSI 160 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~-~~~iv~vss~~~~~ 160 (248)
++|+||||||.... .++.+.+.++|++.+++|+.+++++++.+++.|.++ + .++||++||..+..
T Consensus 76 --~id~vi~~Ag~~~~-~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-----------~~~~~iv~~sS~~~~~ 141 (244)
T 1cyd_A 76 --PVDLLVNNAALVIM-QPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINR-----------GVPGSIVNVSSMVAHV 141 (244)
T ss_dssp --CCSEEEECCCCCCC-BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----------TCCEEEEEECCGGGTS
T ss_pred --CCCEEEECCcccCC-CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhC-----------CCCeEEEEEcchhhcC
Confidence 59999999998764 667778899999999999999999999999999875 3 68999999998887
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC-----------------CCCCchhhHHHH
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS-----------------NAPLEVGAATAG 223 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~-----------------~~~~~~~~~~~~ 223 (248)
+. ++...|+++|++++.|++.++.+++++||++++|+||+++|++... .....++++++.
T Consensus 142 ~~---~~~~~Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~ 218 (244)
T 1cyd_A 142 TF---PNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNS 218 (244)
T ss_dssp CC---TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTTSSCBCHHHHHHH
T ss_pred CC---CCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCccccccccCHHHHHHHHhcCCccCCCCHHHHHHH
Confidence 66 7788999999999999999999999999999999999999986431 113579999999
Q ss_pred HHHHhhhcccccccceeeeCCee
Q psy11190 224 IIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 224 ~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
++.++++.....+|+.+.++|..
T Consensus 219 ~~~l~~~~~~~~~G~~~~v~gG~ 241 (244)
T 1cyd_A 219 ILFLLSDRSASTSGGGILVDAGY 241 (244)
T ss_dssp HHHHHSGGGTTCCSSEEEESTTG
T ss_pred HHHHhCchhhcccCCEEEECCCc
Confidence 99999887778899999998863
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-35 Score=244.85 Aligned_cols=202 Identities=22% Similarity=0.274 Sum_probs=150.5
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||++|||+++|++|++ | +.|++++|+.++++++.+ ..++.++.+|+++... .+.+.+. .+.++
T Consensus 6 k~vlITGas~gIG~~~a~~l~~-g----~~v~~~~r~~~~~~~~~~----~~~~~~~~~D~~~~~~-~~~~~~~-~~~~~ 74 (245)
T 3e9n_A 6 KIAVVTGATGGMGIEIVKDLSR-D----HIVYALGRNPEHLAALAE----IEGVEPIESDIVKEVL-EEGGVDK-LKNLD 74 (245)
T ss_dssp CEEEEESTTSHHHHHHHHHHTT-T----SEEEEEESCHHHHHHHHT----STTEEEEECCHHHHHH-TSSSCGG-GTTCS
T ss_pred CEEEEEcCCCHHHHHHHHHHhC-C----CeEEEEeCCHHHHHHHHh----hcCCcceecccchHHH-HHHHHHH-HHhcC
Confidence 7899999999999999999987 8 899999999877665533 3468899999998755 3433333 33344
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+||||||.... ..+.+.+.++|++.+++|+.+++++++.++|.|+++ +|+||++||.++..+
T Consensus 75 --~id~lv~~Ag~~~~-~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~------------~g~iv~isS~~~~~~ 139 (245)
T 3e9n_A 75 --HVDTLVHAAAVARD-TTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAA------------SGCVIYINSGAGNGP 139 (245)
T ss_dssp --CCSEEEECC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------------TCEEEEEC-------
T ss_pred --CCCEEEECCCcCCC-CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc------------CCeEEEEcCcccccC
Confidence 59999999998765 777888999999999999999999999999999874 589999999999887
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC-----------CCchhhHHHHHHHHhhh
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA-----------PLEVGAATAGIIQFIQS 230 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~-----------~~~~~~~~~~~~~~~~~ 230 (248)
. ++...|+++|++++.|+++|+.|++++||+||+|+||+++|+|.+... ..+|+++++.++.+++.
T Consensus 140 ~---~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~dvA~~i~~l~~~ 216 (245)
T 3e9n_A 140 H---PGNTIYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGLMDSQGTNFRPEIYIEPKEIANAIRFVIDA 216 (245)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------------CCGGGSCHHHHHHHHHHHHTS
T ss_pred C---CCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhhhhhhhhcccccccCCCHHHHHHHHHHHHcC
Confidence 6 788999999999999999999999999999999999999999875432 36899999999999977
Q ss_pred cc
Q psy11190 231 LG 232 (248)
Q Consensus 231 ~~ 232 (248)
..
T Consensus 217 ~~ 218 (245)
T 3e9n_A 217 GE 218 (245)
T ss_dssp CT
T ss_pred CC
Confidence 44
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-34 Score=244.97 Aligned_cols=220 Identities=17% Similarity=0.167 Sum_probs=178.1
Q ss_pred ceEEEecCC--CchhHHHHHHHHhCCCCCCceEEEeecCchh-----------HHHHHHHHhhcC--C-ceeEEe-----
Q psy11190 2 KSILITGCN--RGLGLGMIKVLVGLGNNQPAHIFATCRNKDK-----------AVELLALAQQHS--N-LHVIEL----- 60 (248)
Q Consensus 2 k~~lVtGas--~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~-----------~~~~~~~~~~~~--~-~~~~~~----- 60 (248)
|++|||||+ +|||+++|++|+++| ++|++++|+... ++++.++ ..+. . ...+.+
T Consensus 9 k~~lVTGas~~~GIG~aia~~la~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 83 (297)
T 1d7o_A 9 KRAFIAGIADDNGYGWAVAKSLAAAG----AEILVGTWVPALNIFETSLRRGKFDQSRVL-PDGSLMEIKKVYPLDAVFD 83 (297)
T ss_dssp CEEEEECCSSSSSHHHHHHHHHHHTT----CEEEEEEEHHHHHHHHHHHHTTTTTGGGBC-TTSSBCCEEEEEEECTTCC
T ss_pred CEEEEECCCCCCChHHHHHHHHHHCC----CeEEEeeccccchhhhhhhhhhHhhhhhhh-ccccccccccccccceecc
Confidence 789999999 999999999999999 899999876321 1111000 0000 0 122333
Q ss_pred -------eccC--------CchhhhhHHHHhhhhhcCCCccEEEeccccCC-ccccCCCCChhhhhheeeecchhhHHHH
Q psy11190 61 -------DVTD--------FSKQQDVLFKDISDVVKDQGLNVLVNNAGIAA-KFTRLGLLKPEQMTDHFLVNVTAPLMLT 124 (248)
Q Consensus 61 -------D~~~--------~~~~v~~~~~~i~~~~~~~~iD~lv~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~ 124 (248)
|++| .++ ++.+++++.+.++ ++|+||||||... ...++.+.+.++|++.+++|+.++++++
T Consensus 84 ~~~dv~~Dv~~~~~~~~~~~~~-v~~~~~~~~~~~g--~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~ 160 (297)
T 1d7o_A 84 NPEDVPEDVKANKRYAGSSNWT-VQEAAECVRQDFG--SIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLL 160 (297)
T ss_dssp SGGGSCHHHHTSHHHHHCCCCS-HHHHHHHHHHHHS--CEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred chhhhhhhhhccccccccCHHH-HHHHHHHHHHHcC--CCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHH
Confidence 3333 667 8999999999887 5999999999753 1256677899999999999999999999
Q ss_pred HHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcccccCCCCC-ccchhhHHHHHHHHHHHHhhccC-CCeEEEEecCc
Q psy11190 125 KTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGF-HPYRCSKAALNAATRSLSIDLKG-DKIIATAMHPG 202 (248)
Q Consensus 125 ~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~~~~~~~~-~~y~~sK~a~~~~~~~la~e~~~-~~i~v~~v~PG 202 (248)
++++|.|.+ .|+||++||.++..+. +++ ..|+++|+++++|+++|+.|+++ +||+||+|+||
T Consensus 161 ~~~~~~m~~-------------~g~iv~isS~~~~~~~---~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG 224 (297)
T 1d7o_A 161 SHFLPIMNP-------------GGASISLTYIASERII---PGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAG 224 (297)
T ss_dssp HHHGGGEEE-------------EEEEEEEECGGGTSCC---TTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEC
T ss_pred HHHHHHhcc-------------CceEEEEeccccccCC---CCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEecc
Confidence 999999954 4799999999988766 666 68999999999999999999985 89999999999
Q ss_pred ceecCCCCCC-----------------CCCchhhHHHHHHHHhhhcccccccceeeeCCe
Q psy11190 203 WVKTDMGGSN-----------------APLEVGAATAGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 203 ~v~t~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
+++|+|.... ...+|+++++.+++++++.....+|+.+.++|.
T Consensus 225 ~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG 284 (297)
T 1d7o_A 225 PLGSRAAKAIGFIDTMIEYSYNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNG 284 (297)
T ss_dssp CCBCCCSSCCSHHHHHHHHHHHHSSSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred ccccchhhhccccHHHHHHhhccCCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence 9999997542 135899999999999988788899999999986
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-36 Score=246.63 Aligned_cols=204 Identities=23% Similarity=0.285 Sum_probs=165.2
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
||++|||||++|||++++++|+++| ++|++++|+.++++. . +++|++|.++ ++++++++ .
T Consensus 1 mk~vlVTGas~gIG~~~a~~l~~~G----~~V~~~~r~~~~~~~-----------~-~~~Dl~~~~~-v~~~~~~~---~ 60 (257)
T 1fjh_A 1 MSIIVISGCATGIGAATRKVLEAAG----HQIVGIDIRDAEVIA-----------D-LSTAEGRKQA-IADVLAKC---S 60 (257)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT----CEEEEEESSSSSEEC-----------C-TTSHHHHHHH-HHHHHTTC---T
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCC----CEEEEEeCCchhhcc-----------c-cccCCCCHHH-HHHHHHHh---C
Confidence 8999999999999999999999999 899999998765321 1 6799999888 88776644 1
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+ ++|+||||||...+ .+.+++.+++|+.+++++++.++|.|.++ +.++||++||..+..
T Consensus 61 ~--~id~lv~~Ag~~~~--------~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-----------~~g~iv~isS~~~~~ 119 (257)
T 1fjh_A 61 K--GMDGLVLCAGLGPQ--------TKVLGNVVSVNYFGATELMDAFLPALKKG-----------HQPAAVVISSVASAH 119 (257)
T ss_dssp T--CCSEEEECCCCCTT--------CSSHHHHHHHHTHHHHHHHHHHHHHHHTS-----------SSCEEEEECCGGGGS
T ss_pred C--CCCEEEECCCCCCC--------cccHHHHHHHhhHHHHHHHHHHHHHHhhc-----------CCcEEEEECChhhhc
Confidence 3 59999999997542 13489999999999999999999999875 568999999998873
Q ss_pred cc-------------------------cCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC---
Q psy11190 161 ED-------------------------NTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN--- 212 (248)
Q Consensus 161 ~~-------------------------~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~--- 212 (248)
.. .+.++...|+++|++++.|++.++.+++++||+||+|+||+++|++.+..
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~ 199 (257)
T 1fjh_A 120 LAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQD 199 (257)
T ss_dssp SCGGGCTTHHHHHHTCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC------------
T ss_pred cccccchhhhhhcccchhhhhhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccc
Confidence 10 11135678999999999999999999999999999999999999986532
Q ss_pred ---------------CCCchhhHHHHHHHHhhhcccccccceeeeCCe
Q psy11190 213 ---------------APLEVGAATAGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 213 ---------------~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
...+|+++++.++.++++.....+|+++.++|.
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~~tG~~~~vdgG 247 (257)
T 1fjh_A 200 PRYGESIAKFVPPMGRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGG 247 (257)
T ss_dssp ---------CCCSTTSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred hhHHHHHHhcccccCCCCCHHHHHHHHHHHhCchhcCCcCCEEEECCC
Confidence 135799999999999988777899999999986
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-34 Score=243.63 Aligned_cols=206 Identities=22% Similarity=0.278 Sum_probs=177.8
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHh-hc-CCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQ-QH-SNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~-~~-~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|+++||||+||||++++++|+++| ++|++++|+.++++++.+... .+ .++.++.+|++|.++ ++.+++++.+.
T Consensus 29 k~vlITGasggIG~~la~~l~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~-v~~~~~~~~~~ 103 (286)
T 1xu9_A 29 KKVIVTGASKGIGREMAYHLAKMG----AHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTF-AEQFVAQAGKL 103 (286)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHH-HHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHH-HHHHHHHHHHH
Confidence 689999999999999999999999 899999999988877744332 23 268899999999999 99999999988
Q ss_pred hcCCCccEEEec-cccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 80 VKDQGLNVLVNN-AGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 80 ~~~~~iD~lv~~-ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
++ ++|+|||| ||... ..+.+.+.+++++.+++|+.+++++++.++|.|.++ .++||++||.++
T Consensus 104 ~g--~iD~li~naag~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~------------~g~iv~isS~~~ 167 (286)
T 1xu9_A 104 MG--GLDMLILNHITNTS--LNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS------------NGSIVVVSSLAG 167 (286)
T ss_dssp HT--SCSEEEECCCCCCC--CCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------------TCEEEEEEEGGG
T ss_pred cC--CCCEEEECCccCCC--CccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHC------------CCEEEEECCccc
Confidence 87 59999999 56543 344556899999999999999999999999998763 589999999998
Q ss_pred cccccCCCCCccchhhHHHHHHHHHHHHhhc--cCCCeEEEEecCcceecCCCCC-------CCCCchhhHHHHHHHHhh
Q psy11190 159 SIEDNTQGGFHPYRCSKAALNAATRSLSIDL--KGDKIIATAMHPGWVKTDMGGS-------NAPLEVGAATAGIIQFIQ 229 (248)
Q Consensus 159 ~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~--~~~~i~v~~v~PG~v~t~~~~~-------~~~~~~~~~~~~~~~~~~ 229 (248)
..+. ++...|+++|++++.|+++++.|+ ...||+|++|+||+++|++... ....+|+++++.++..+.
T Consensus 168 ~~~~---~~~~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~vA~~i~~~~~ 244 (286)
T 1xu9_A 168 KVAY---PMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSGIVHMQAAPKEECALEIIKGGA 244 (286)
T ss_dssp TSCC---TTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHSCGGGGGGCBCHHHHHHHHHHHHH
T ss_pred ccCC---CCccHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhHHHhccccccCCCCCHHHHHHHHHHHHh
Confidence 8776 778899999999999999999999 6789999999999999997531 235789999999999886
Q ss_pred hc
Q psy11190 230 SL 231 (248)
Q Consensus 230 ~~ 231 (248)
..
T Consensus 245 ~~ 246 (286)
T 1xu9_A 245 LR 246 (286)
T ss_dssp TT
T ss_pred cC
Confidence 63
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-34 Score=234.17 Aligned_cols=215 Identities=20% Similarity=0.192 Sum_probs=180.3
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
+|++|||||++|||++++++|+++| ++|++++|+.+ . ..+.++++|++|.++ ++++++++ +.+
T Consensus 2 ~k~vlVtGasggiG~~la~~l~~~G----~~V~~~~r~~~-~----------~~~~~~~~D~~~~~~-~~~~~~~~-~~~ 64 (242)
T 1uay_A 2 ERSALVTGGASGLGRAAALALKARG----YRVVVLDLRRE-G----------EDLIYVEGDVTREED-VRRAVARA-QEE 64 (242)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHT----CEEEEEESSCC-S----------SSSEEEECCTTCHHH-HHHHHHHH-HHH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCC----CEEEEEccCcc-c----------cceEEEeCCCCCHHH-HHHHHHHH-Hhh
Confidence 3789999999999999999999999 89999999875 1 245889999999999 99999999 666
Q ss_pred cCCCccEEEeccccCCccccCCCCCh----hhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecC
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKP----EQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSI 156 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~----~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~ 156 (248)
+ ++|+||||||.... ..+.+.+. +++++.+++|+.+++++++.+++.|.+++... ....++||++||.
T Consensus 65 ~--~~d~li~~ag~~~~-~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~-----~~~~~~iv~~sS~ 136 (242)
T 1uay_A 65 A--PLFAVVSAAGVGLA-EKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDA-----EGQRGVIVNTASV 136 (242)
T ss_dssp S--CEEEEEECCCCCCC-CCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCT-----TSCSEEEEEECCT
T ss_pred C--CceEEEEcccccCc-ccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCC-----CCCCeEEEEeCCh
Confidence 6 59999999998754 44444444 49999999999999999999999998742000 0023599999999
Q ss_pred CCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC----------------CCCchhhH
Q psy11190 157 MGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN----------------APLEVGAA 220 (248)
Q Consensus 157 ~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~----------------~~~~~~~~ 220 (248)
.+..+. ++...|+++|++++.|++.++.|++++||++++|+||+++|++.... ...+|+++
T Consensus 137 ~~~~~~---~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv 213 (242)
T 1uay_A 137 AAFEGQ---IGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKAKASLAAQVPFPPRLGRPEEY 213 (242)
T ss_dssp HHHHCC---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHHHHHHHHTTCCSSCSCCCHHHH
T ss_pred hhccCC---CCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhccchhHHHHHHhhCCCcccCCCHHHH
Confidence 988766 77889999999999999999999999999999999999999874321 13479999
Q ss_pred HHHHHHHhhhcccccccceeeeCCe
Q psy11190 221 TAGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 221 ~~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
++.++.++++ ...+|+.+.++|.
T Consensus 214 a~~~~~l~~~--~~~~G~~~~v~gG 236 (242)
T 1uay_A 214 AALVLHILEN--PMLNGEVVRLDGA 236 (242)
T ss_dssp HHHHHHHHHC--TTCCSCEEEESTT
T ss_pred HHHHHHHhcC--CCCCCcEEEEcCC
Confidence 9999999987 6788999999886
|
| >4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-33 Score=248.28 Aligned_cols=221 Identities=13% Similarity=0.071 Sum_probs=180.4
Q ss_pred CceEEEecCCCchhHH--HHHHHHhCCCCCCceEEEeecCchh------------HHHHHHHH-hhcCCceeEEeeccCC
Q psy11190 1 MKSILITGCNRGLGLG--MIKVLVGLGNNQPAHIFATCRNKDK------------AVELLALA-QQHSNLHVIELDVTDF 65 (248)
Q Consensus 1 ~k~~lVtGas~giG~~--ia~~l~~~g~~~~~~V~~~~r~~~~------------~~~~~~~~-~~~~~~~~~~~D~~~~ 65 (248)
.|++|||||++|||++ +++.|+++| ++|++++|+.+. .+.+.+.. ..+.++.++++|++|.
T Consensus 60 gK~aLVTGassGIG~A~aia~ala~~G----a~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~ 135 (418)
T 4eue_A 60 PKKVLIVGASSGFGLATRISVAFGGPE----AHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSN 135 (418)
T ss_dssp CSEEEEESCSSHHHHHHHHHHHHSSSC----CEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHHhCC----CEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCH
Confidence 3799999999999999 999999999 899999997654 23343333 3345788999999999
Q ss_pred chhhhhHHHHhhhhhcCCCccEEEeccccCC------------ccccC---------------------CCCChhhhhhe
Q psy11190 66 SKQQDVLFKDISDVVKDQGLNVLVNNAGIAA------------KFTRL---------------------GLLKPEQMTDH 112 (248)
Q Consensus 66 ~~~v~~~~~~i~~~~~~~~iD~lv~~ag~~~------------~~~~~---------------------~~~~~~~~~~~ 112 (248)
++ ++++++.+.+.+| ++|+||||||... ..+++ .+.+.++|++.
T Consensus 136 ~~-v~~~v~~i~~~~G--~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~ 212 (418)
T 4eue_A 136 ET-KDKVIKYIKDEFG--KIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEET 212 (418)
T ss_dssp HH-HHHHHHHHHHTTC--CEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHH
T ss_pred HH-HHHHHHHHHHHcC--CCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHH
Confidence 99 9999999999987 6999999999741 11223 45689999999
Q ss_pred eeecchhhH-HHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcccccCCCCC--ccchhhHHHHHHHHHHHHhhc
Q psy11190 113 FLVNVTAPL-MLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGF--HPYRCSKAALNAATRSLSIDL 189 (248)
Q Consensus 113 ~~~n~~~~~-~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~~~~~~~~--~~y~~sK~a~~~~~~~la~e~ 189 (248)
+++|..+.+ .+++.+++.+..+ ..|+||++||..+..+. +.+ ..|++||+++.+|+++|+.|+
T Consensus 213 ~~vn~~~~~~~~~~~l~~~~~~~-----------~gg~IV~iSSi~~~~~~---p~~~~~aY~ASKaAL~~ltrsLA~EL 278 (418)
T 4eue_A 213 RKVMGGEDWQEWCEELLYEDCFS-----------DKATTIAYSYIGSPRTY---KIYREGTIGIAKKDLEDKAKLINEKL 278 (418)
T ss_dssp HHHHSSHHHHHHHHHHHHTTCEE-----------EEEEEEEEECCCCGGGT---TTTTTSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHHhhhc-----------CCcEEEEEeCchhcCCC---CccccHHHHHHHHHHHHHHHHHHHHh
Confidence 999999888 7777777653332 46899999999998776 666 899999999999999999999
Q ss_pred cC-CCeEEEEecCcceecCCCCCCC---------------CCchhhHHHHHHHHhhhcccccccceeeeCC
Q psy11190 190 KG-DKIIATAMHPGWVKTDMGGSNA---------------PLEVGAATAGIIQFIQSLGEAHNGGFFEYTG 244 (248)
Q Consensus 190 ~~-~~i~v~~v~PG~v~t~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g 244 (248)
++ +|||||+|.||+++|++....+ ..++|+++.++..++++ .-.+|+.+.+||
T Consensus 279 a~~~GIrVN~V~PG~v~T~~s~~ip~~p~y~~~~~~~mk~~G~~E~v~e~~~~L~sd--~~~~g~~~~~D~ 347 (418)
T 4eue_A 279 NRVIGGRAFVSVNKALVTKASAYIPTFPLYAAILYKVMKEKNIHENCIMQIERMFSE--KIYSNEKIQFDD 347 (418)
T ss_dssp HHHHSCEEEEEECCCCCCHHHHTSTTHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHH--TTSSSSCCCCCT
T ss_pred CCccCeEEEEEECCcCcChhhhcCCCCcHHHHHHHHHHhhcCChHHHHHHHHHHhhc--cccCCCccccCC
Confidence 99 9999999999999999865543 35689999999999887 444577756665
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.98 E-value=6.1e-32 Score=215.85 Aligned_cols=192 Identities=16% Similarity=0.211 Sum_probs=165.3
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhcC
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVKD 82 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~~ 82 (248)
+++||||+||||++++++|+ +| ++|++++|+.+ .+++|++|.++ ++++++.+ +
T Consensus 5 ~vlVtGasg~iG~~~~~~l~-~g----~~V~~~~r~~~----------------~~~~D~~~~~~-~~~~~~~~----~- 57 (202)
T 3d7l_A 5 KILLIGASGTLGSAVKERLE-KK----AEVITAGRHSG----------------DVTVDITNIDS-IKKMYEQV----G- 57 (202)
T ss_dssp EEEEETTTSHHHHHHHHHHT-TT----SEEEEEESSSS----------------SEECCTTCHHH-HHHHHHHH----C-
T ss_pred EEEEEcCCcHHHHHHHHHHH-CC----CeEEEEecCcc----------------ceeeecCCHHH-HHHHHHHh----C-
Confidence 69999999999999999999 99 89999999864 47899999988 88887665 3
Q ss_pred CCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcccc
Q psy11190 83 QGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIED 162 (248)
Q Consensus 83 ~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~~ 162 (248)
++|+||||||.... .++.+.+.+++++.+++|+.+++++++.+.+.|.+ .++||++||..+..+.
T Consensus 58 -~~d~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-------------~~~iv~~sS~~~~~~~ 122 (202)
T 3d7l_A 58 -KVDAIVSATGSATF-SPLTELTPEKNAVTISSKLGGQINLVLLGIDSLND-------------KGSFTLTTGIMMEDPI 122 (202)
T ss_dssp -CEEEEEECCCCCCC-CCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEE-------------EEEEEEECCGGGTSCC
T ss_pred -CCCEEEECCCCCCC-CChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhcc-------------CCEEEEEcchhhcCCC
Confidence 59999999997654 66777889999999999999999999999998853 4789999999887665
Q ss_pred cCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCC------CCCCCchhhHHHHHHHHhhhcccccc
Q psy11190 163 NTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGG------SNAPLEVGAATAGIIQFIQSLGEAHN 236 (248)
Q Consensus 163 ~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (248)
++...|+++|++++.|++.++.|+ ++||++++|.||+++|++.. .....+++++++.++..+. ...+
T Consensus 123 ---~~~~~Y~~sK~~~~~~~~~~~~e~-~~gi~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~---~~~~ 195 (202)
T 3d7l_A 123 ---VQGASAAMANGAVTAFAKSAAIEM-PRGIRINTVSPNVLEESWDKLEPFFEGFLPVPAAKVARAFEKSVF---GAQT 195 (202)
T ss_dssp ---TTCHHHHHHHHHHHHHHHHHTTSC-STTCEEEEEEECCBGGGHHHHGGGSTTCCCBCHHHHHHHHHHHHH---SCCC
T ss_pred ---CccHHHHHHHHHHHHHHHHHHHHc-cCCeEEEEEecCccCCchhhhhhhccccCCCCHHHHHHHHHHhhh---cccc
Confidence 778899999999999999999999 78999999999999998632 2346789999999988773 4567
Q ss_pred cceeeeC
Q psy11190 237 GGFFEYT 243 (248)
Q Consensus 237 g~~~~~~ 243 (248)
|+.+..|
T Consensus 196 G~~~~vd 202 (202)
T 3d7l_A 196 GESYQVY 202 (202)
T ss_dssp SCEEEEC
T ss_pred CceEecC
Confidence 7777653
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=99.97 E-value=2e-31 Score=241.35 Aligned_cols=214 Identities=16% Similarity=0.131 Sum_probs=176.8
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEe-ecCc-------------hhHHHH-HHHHhhcCCceeEEeeccCCc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFAT-CRNK-------------DKAVEL-LALAQQHSNLHVIELDVTDFS 66 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~-~r~~-------------~~~~~~-~~~~~~~~~~~~~~~D~~~~~ 66 (248)
|++|||||++|||+++|++|+++|+ .+|+++ +|+. +.++++ .++...+.++.++++|++|.+
T Consensus 252 ~~vLITGgsgGIG~~lA~~La~~G~---~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~ 328 (525)
T 3qp9_A 252 GTVLVTGAEEPAAAEAARRLARDGA---GHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAE 328 (525)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHHTC---CEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHH
T ss_pred CEEEEECCCCcHHHHHHHHHHHcCC---CEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHH
Confidence 6899999999999999999999994 457887 8983 344455 344444668999999999999
Q ss_pred hhhhhHHHHhhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCC
Q psy11190 67 KQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSS 146 (248)
Q Consensus 67 ~~v~~~~~~i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~ 146 (248)
+ ++.+++++. .++ ++|+||||||+... ..+.+.+.+++++.+++|+.|++++.+.+.+.+.+++ .
T Consensus 329 ~-v~~~~~~i~-~~g--~id~vVh~AGv~~~-~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~----------~ 393 (525)
T 3qp9_A 329 A-AARLLAGVS-DAH--PLSAVLHLPPTVDS-EPLAATDADALARVVTAKATAALHLDRLLREAAAAGG----------R 393 (525)
T ss_dssp H-HHHHHHTSC-TTS--CEEEEEECCCCCCC-CCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC--------------C
T ss_pred H-HHHHHHHHH-hcC--CCcEEEECCcCCCC-CchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCC----------C
Confidence 9 999999998 565 69999999999876 7888999999999999999999999999999987641 1
Q ss_pred CceEEEeecCCCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC-----------CCCC
Q psy11190 147 RAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS-----------NAPL 215 (248)
Q Consensus 147 ~~~iv~vss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~-----------~~~~ 215 (248)
.++||++||.++..+. +++..|+++|+++++|+ .++..+||++++|+||+++|+|... ..++
T Consensus 394 ~~~iV~~SS~a~~~g~---~g~~~YaaaKa~l~~lA----~~~~~~gi~v~sI~pG~~~tgm~~~~~~~~~~~~~g~~~l 466 (525)
T 3qp9_A 394 PPVLVLFSSVAAIWGG---AGQGAYAAGTAFLDALA----GQHRADGPTVTSVAWSPWEGSRVTEGATGERLRRLGLRPL 466 (525)
T ss_dssp CCEEEEEEEGGGTTCC---TTCHHHHHHHHHHHHHH----TSCCSSCCEEEEEEECCBTTSGGGSSHHHHHHHHTTBCCB
T ss_pred CCEEEEECCHHHcCCC---CCCHHHHHHHHHHHHHH----HHHHhCCCCEEEEECCccccccccchhhHHHHHhcCCCCC
Confidence 6899999999999887 88999999999998874 5666789999999999999999732 1257
Q ss_pred chhhHHHHHHHHhhhccccccccee
Q psy11190 216 EVGAATAGIIQFIQSLGEAHNGGFF 240 (248)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~g~~~ 240 (248)
+|+++++.+...+...........+
T Consensus 467 ~pee~a~~l~~~l~~~~~~v~v~~~ 491 (525)
T 3qp9_A 467 APATALTALDTALGHGDTAVTIADV 491 (525)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEECCB
T ss_pred CHHHHHHHHHHHHhCCCCeEEEEeC
Confidence 9999999999999876554433333
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.2e-31 Score=213.15 Aligned_cols=195 Identities=18% Similarity=0.226 Sum_probs=162.0
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|+++||||+||||++++++|+++ +|++++|+.++++++.+... . .++++|++|.++ ++.++++ ++
T Consensus 1 k~vlVtGasg~iG~~la~~l~~~------~V~~~~r~~~~~~~~~~~~~---~-~~~~~D~~~~~~-~~~~~~~----~~ 65 (207)
T 2yut_A 1 MRVLITGATGGLGGAFARALKGH------DLLLSGRRAGALAELAREVG---A-RALPADLADELE-AKALLEE----AG 65 (207)
T ss_dssp CEEEEETTTSHHHHHHHHHTTTS------EEEEECSCHHHHHHHHHHHT---C-EECCCCTTSHHH-HHHHHHH----HC
T ss_pred CEEEEEcCCcHHHHHHHHHHHhC------CEEEEECCHHHHHHHHHhcc---C-cEEEeeCCCHHH-HHHHHHh----cC
Confidence 58999999999999999999954 79999999877766644332 2 788999999988 8887766 44
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+||||||.... .++.+.+.+++++.+++|+.+++++++.+ .++ +.++||++||..+..+
T Consensus 66 --~id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----~~~-----------~~~~iv~~sS~~~~~~ 127 (207)
T 2yut_A 66 --PLDLLVHAVGKAGR-ASVREAGRDLVEEMLAAHLLTAAFVLKHA----RFQ-----------KGARAVFFGAYPRYVQ 127 (207)
T ss_dssp --SEEEEEECCCCCCC-BCSCC---CHHHHHHHHHHHHHHHHHHHC----CEE-----------EEEEEEEECCCHHHHS
T ss_pred --CCCEEEECCCcCCC-CChhhCCHHHHHHHHHHHhHHHHHHHHHH----Hhc-----------CCcEEEEEcChhhccC
Confidence 59999999998754 67778889999999999999999999988 222 4689999999988776
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC-----CCCCchhhHHHHHHHHhhhcc
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS-----NAPLEVGAATAGIIQFIQSLG 232 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 232 (248)
. ++...|+++|++++.|++.++.+++++||++++|.||+++|++... ....+++++++.++.++....
T Consensus 128 ~---~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~ 200 (207)
T 2yut_A 128 V---PGFAAYAAAKGALEAYLEAARKELLREGVHLVLVRLPAVATGLWAPLGGPPKGALSPEEAARKVLEGLFREP 200 (207)
T ss_dssp S---TTBHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEECCCCBCSGGGGGGTSCCTTCBCHHHHHHHHHHHHC--C
T ss_pred C---CCcchHHHHHHHHHHHHHHHHHHHhhhCCEEEEEecCcccCCCccccCCCCCCCCCHHHHHHHHHHHHhCCC
Confidence 6 7788999999999999999999999999999999999999997432 235789999999999997644
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-30 Score=258.10 Aligned_cols=221 Identities=19% Similarity=0.232 Sum_probs=180.4
Q ss_pred ceEEEecCCCc-hhHHHHHHHHhCCCCCCceEEEe-ecCchhHHHHH-HHHhh----cCCceeEEeeccCCchhhhhHHH
Q psy11190 2 KSILITGCNRG-LGLGMIKVLVGLGNNQPAHIFAT-CRNKDKAVELL-ALAQQ----HSNLHVIELDVTDFSKQQDVLFK 74 (248)
Q Consensus 2 k~~lVtGas~g-iG~~ia~~l~~~g~~~~~~V~~~-~r~~~~~~~~~-~~~~~----~~~~~~~~~D~~~~~~~v~~~~~ 74 (248)
|++|||||++| ||+++|+.|+++| ++|+++ +|+.++++++. ++... +.++.++++|++|.++ ++.+++
T Consensus 676 KvaLVTGASsGgIG~aIA~~La~~G----A~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~s-V~alv~ 750 (1887)
T 2uv8_A 676 KYVLITGAGKGSIGAEVLQGLLQGG----AKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQD-VEALIE 750 (1887)
T ss_dssp CEEEEESCCSSSHHHHHHHHHHHTT----CEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHH-HHHHHH
T ss_pred CEEEEECCCCcHHHHHHHHHHHHCC----CEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHH-HHHHHH
Confidence 78999999998 9999999999999 899998 68777766553 33221 3468899999999999 999999
Q ss_pred Hhhhh---hcCC-CccEEEeccccCCccc-cCCCCC--hhhhhheeeecchhhHHHHHHH--hHHHHhhhhcccCCCCCC
Q psy11190 75 DISDV---VKDQ-GLNVLVNNAGIAAKFT-RLGLLK--PEQMTDHFLVNVTAPLMLTKTM--LPLLKKASEANSAAPLGS 145 (248)
Q Consensus 75 ~i~~~---~~~~-~iD~lv~~ag~~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~l~~~~--~~~l~~~~~~~~~~~~~~ 145 (248)
++.+. ++-+ ++|+||||||+... . ++.+.+ .++|++.+++|+.+++++++.+ +|.|.++
T Consensus 751 ~i~~~~~~~G~G~~LDiLVNNAGi~~~-~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~----------- 818 (1887)
T 2uv8_A 751 FIYDTEKNGGLGWDLDAIIPFAAIPEQ-GIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETR----------- 818 (1887)
T ss_dssp HHHSCTTTTSCCCCCSEEEECCCCCCC-SBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSC-----------
T ss_pred HHHHhccccccCCCCeEEEECCCcCCC-CCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhC-----------
Confidence 99887 2212 49999999998765 4 777788 8999999999999999999988 6777653
Q ss_pred CCceEEEeecCCCcccccCCCCCccchhhHHHHHHH-HHHHHhhccCCCeEEEEecCccee-cCCCCCC-----------
Q psy11190 146 SRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNAA-TRSLSIDLKGDKIIATAMHPGWVK-TDMGGSN----------- 212 (248)
Q Consensus 146 ~~~~iv~vss~~~~~~~~~~~~~~~y~~sK~a~~~~-~~~la~e~~~~~i~v~~v~PG~v~-t~~~~~~----------- 212 (248)
+.|+||++||..+..+ +...|+++|+++.+| ++.++.+++++ |+||+|+||+++ |+|....
T Consensus 819 ~~G~IVnISS~ag~~g-----g~~aYaASKAAL~~Lttr~lA~ela~~-IrVNaV~PG~V~tT~m~~~~~~~~~~~~~~p 892 (1887)
T 2uv8_A 819 PAQVILPMSPNHGTFG-----GDGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMSANNIIAEGIEKMG 892 (1887)
T ss_dssp CEEEEEEECSCTTCSS-----CBTTHHHHHHHGGGHHHHHHHSSCTTT-EEEEEEEECCEECC-----CCTTHHHHHTTS
T ss_pred CCCEEEEEcChHhccC-----CCchHHHHHHHHHHHHHHHHHHHhCCC-eEEEEEEecccccccccccchhHHHHHHhcC
Confidence 4689999999988764 467899999999999 99999999988 999999999999 8886421
Q ss_pred -CCCchhhHHHHHHHHhhhc-ccccccceeeeC--Ce
Q psy11190 213 -APLEVGAATAGIIQFIQSL-GEAHNGGFFEYT--GK 245 (248)
Q Consensus 213 -~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~--g~ 245 (248)
...+|++++..+++++++. ....+|+.+.++ |.
T Consensus 893 lr~~sPEEVA~avlfLaSd~~as~iTGq~I~VDVDGG 929 (1887)
T 2uv8_A 893 VRTFSQKEMAFNLLGLLTPEVVELCQKSPVMADLNGG 929 (1887)
T ss_dssp CCCEEHHHHHHHHHGGGSHHHHHHHHHSCEEEEESCS
T ss_pred CCCCCHHHHHHHHHHHhCCCccccccCcEEEEECCCC
Confidence 2347999999999999876 567788887664 64
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.8e-31 Score=253.55 Aligned_cols=218 Identities=19% Similarity=0.227 Sum_probs=181.0
Q ss_pred ceEEEecCCCc-hhHHHHHHHHhCCCCCCceEEEe-ecCchhHHHHHHHH-hh----cCCceeEEeeccCCchhhhhHHH
Q psy11190 2 KSILITGCNRG-LGLGMIKVLVGLGNNQPAHIFAT-CRNKDKAVELLALA-QQ----HSNLHVIELDVTDFSKQQDVLFK 74 (248)
Q Consensus 2 k~~lVtGas~g-iG~~ia~~l~~~g~~~~~~V~~~-~r~~~~~~~~~~~~-~~----~~~~~~~~~D~~~~~~~v~~~~~ 74 (248)
|++|||||++| ||+++|++|+++| ++|+++ +|+.++++++.+.+ .. +.++.++++|++|.++ ++++++
T Consensus 477 KvALVTGASgGGIGrAIAr~LA~~G----A~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~es-VeaLVe 551 (1688)
T 2pff_A 477 KYVLITGAGKGSIGAEVLQGLLQGG----AKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQD-VEALIE 551 (1688)
T ss_dssp CCEEECSCSSSSTHHHHHHHHHHHT----CEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTH-HHHHHH
T ss_pred CEEEEECCChHHHHHHHHHHHHHCc----CEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHH-HHHHHH
Confidence 78999999998 9999999999999 889988 67776665553322 21 3468899999999999 999999
Q ss_pred Hhhhh-----hcCCCccEEEeccccCCccc-cCCCCC--hhhhhheeeecchhhHHHHHHH--hHHHHhhhhcccCCCCC
Q psy11190 75 DISDV-----VKDQGLNVLVNNAGIAAKFT-RLGLLK--PEQMTDHFLVNVTAPLMLTKTM--LPLLKKASEANSAAPLG 144 (248)
Q Consensus 75 ~i~~~-----~~~~~iD~lv~~ag~~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~l~~~~--~~~l~~~~~~~~~~~~~ 144 (248)
++.+. ++. ++|+||||||+... . ++.+.+ .++|++.+++|+.+++.+++.+ +|.|.++
T Consensus 552 ~I~e~~~~~GfG~-~IDILVNNAGI~~~-g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~kr---------- 619 (1688)
T 2pff_A 552 FIYDTEKNGGLGW-DLDAIIPFAAIPEQ-GIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETR---------- 619 (1688)
T ss_dssp HHHSCTTSSSCCC-CCCEEECCCCCCCC-SBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTS----------
T ss_pred HHHHhccccccCC-CCeEEEECCCcCCC-CCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhC----------
Confidence 99887 441 49999999998765 4 777887 8999999999999999999998 7777664
Q ss_pred CCCceEEEeecCCCcccccCCCCCccchhhHHHHHHH-HHHHHhhccCCCeEEEEecCccee-cCCCCCC----------
Q psy11190 145 SSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNAA-TRSLSIDLKGDKIIATAMHPGWVK-TDMGGSN---------- 212 (248)
Q Consensus 145 ~~~~~iv~vss~~~~~~~~~~~~~~~y~~sK~a~~~~-~~~la~e~~~~~i~v~~v~PG~v~-t~~~~~~---------- 212 (248)
+.|+||++||.++..+ +...|++||+++.+| ++.++.+++++ |+||+|+||+++ |+|....
T Consensus 620 -ggGrIVnISSiAG~~G-----g~saYaASKAAL~aLttrsLAeEla~~-IRVNaVaPG~V~TT~M~~~~e~~~~~l~~i 692 (1688)
T 2pff_A 620 -PAQVILPMSPNHGTFG-----GDGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMSANNIIAEGIEKM 692 (1688)
T ss_dssp -CEEECCCCCSCTTTSS-----CBTTHHHHHHHHTHHHHHTTTSSCTTT-EECCCCCCCCCCCCSSSCTTTTCSTTTSSS
T ss_pred -CCCEEEEEEChHhccC-----CchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEECcCcCCcccCCchHHHHHHHhC
Confidence 4589999999988764 467899999999999 88899999887 999999999999 7875421
Q ss_pred --CCCchhhHHHHHHHHhhhc-ccccccceeeeC
Q psy11190 213 --APLEVGAATAGIIQFIQSL-GEAHNGGFFEYT 243 (248)
Q Consensus 213 --~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~ 243 (248)
...+|++++..++.++++. ....+|+.+.++
T Consensus 693 plR~~sPEEVA~aIlFLaSd~sAs~ITGq~I~VD 726 (1688)
T 2pff_A 693 GVRTFSQKEMAFNLLGLLTPEVVELCQKSPVMAD 726 (1688)
T ss_dssp SCCCCCCCTTHHHHHHHTSTTHHHHHTTSCCCCC
T ss_pred CCCCCCHHHHHHHHHHHhCCCccccccCcEEEEE
Confidence 1347999999999999876 456788887654
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.3e-30 Score=213.33 Aligned_cols=204 Identities=19% Similarity=0.187 Sum_probs=167.4
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
||++|||||+||||++++++|+++| ++|++++|+.++.+. .+++|+++.++ ++.+++++ .
T Consensus 1 Mk~vlVtGasg~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~------------~~~~D~~~~~~-~~~~~~~~---~ 60 (255)
T 2dkn_A 1 MSVIAITGSASGIGAALKELLARAG----HTVIGIDRGQADIEA------------DLSTPGGRETA-VAAVLDRC---G 60 (255)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTT----CEEEEEESSSSSEEC------------CTTSHHHHHHH-HHHHHHHH---T
T ss_pred CcEEEEeCCCcHHHHHHHHHHHhCC----CEEEEEeCChhHccc------------cccCCcccHHH-HHHHHHHc---C
Confidence 8999999999999999999999999 899999998765321 16789999888 88777654 1
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+ ++|+||||||.... .+.++..+++|+.+++++++.+++.|.++ +.++||++||..+..
T Consensus 61 ~--~~d~vi~~Ag~~~~--------~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-----------~~~~iv~~sS~~~~~ 119 (255)
T 2dkn_A 61 G--VLDGLVCCAGVGVT--------AANSGLVVAVNYFGVSALLDGLAEALSRG-----------QQPAAVIVGSIAATQ 119 (255)
T ss_dssp T--CCSEEEECCCCCTT--------SSCHHHHHHHHTHHHHHHHHHHHHHHHTS-----------SSCEEEEECCGGGGS
T ss_pred C--CccEEEECCCCCCc--------chhHHHHHHHHhHHHHHHHHHHHHHhhhc-----------CCceEEEEecccccc
Confidence 2 59999999997531 23588899999999999999999999874 468999999988775
Q ss_pred cccC-----------------------CCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC------
Q psy11190 161 EDNT-----------------------QGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS------ 211 (248)
Q Consensus 161 ~~~~-----------------------~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~------ 211 (248)
+... .++...|+.+|++++.+++.++.++.++|+++++|+||++.|++.+.
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~~~~~~ 199 (255)
T 2dkn_A 120 PGAAELPMVEAMLAGDEARAIELAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADPR 199 (255)
T ss_dssp TTGGGCHHHHHHHHTCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHHHHCTT
T ss_pred ccccccchhhhhcccchhhhhhhccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhcccchh
Confidence 4310 13456899999999999999999998889999999999999985321
Q ss_pred ------------CCCCchhhHHHHHHHHhhhcccccccceeeeCCe
Q psy11190 212 ------------NAPLEVGAATAGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 212 ------------~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
.....++++++.++.++.......+|+.+..+|.
T Consensus 200 ~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg 245 (255)
T 2dkn_A 200 YGESTRRFVAPLGRGSEPREVAEAIAFLLGPQASFIHGSVLFVDGG 245 (255)
T ss_dssp THHHHHSCCCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHhCCCcccceeeEEEecCC
Confidence 1246799999999999987666788999988875
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-29 Score=227.90 Aligned_cols=213 Identities=22% Similarity=0.221 Sum_probs=174.6
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCch---hHHHH-HHHHhhcCCceeEEeeccCCchhhhhHHHHhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKD---KAVEL-LALAQQHSNLHVIELDVTDFSKQQDVLFKDIS 77 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~---~~~~~-~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~ 77 (248)
|++|||||++|||++++++|+++|+ .+|++++|+.. ..+++ .++...+.++.++.+|++|.++ ++.+++++.
T Consensus 240 ~~vLITGgsgGIG~alA~~La~~Ga---~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~-v~~~~~~i~ 315 (496)
T 3mje_A 240 GSVLVTGGTGGIGGRVARRLAEQGA---AHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREA-LAALLAELP 315 (496)
T ss_dssp SEEEEETCSSHHHHHHHHHHHHTTC---SEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHH-HHHHHHTCC
T ss_pred CEEEEECCCCchHHHHHHHHHHCCC---cEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHH-HHHHHHHHH
Confidence 7999999999999999999999993 38999999743 34555 3444445689999999999999 999999988
Q ss_pred hhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCC
Q psy11190 78 DVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIM 157 (248)
Q Consensus 78 ~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~ 157 (248)
+. + ++|+||||||+......+.+.+.++|++.+++|+.+.+++.+.+.+. ..++||++||.+
T Consensus 316 ~~-g--~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~---------------~~~~iV~~SS~a 377 (496)
T 3mje_A 316 ED-A--PLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADL---------------DLDAFVLFSSGA 377 (496)
T ss_dssp TT-S--CEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTS---------------CCSEEEEEEEHH
T ss_pred Hh-C--CCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhcc---------------CCCEEEEEeChH
Confidence 76 4 59999999998733378889999999999999999999999887654 467899999999
Q ss_pred CcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC------------CCCchhhHHHHHH
Q psy11190 158 GSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN------------APLEVGAATAGII 225 (248)
Q Consensus 158 ~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~------------~~~~~~~~~~~~~ 225 (248)
+..+. +++..|+++|+++++|++.++ .+||++++|+||++.++.+... .+++|++.++.+.
T Consensus 378 ~~~g~---~g~~~YaAaKa~ldala~~~~----~~Gi~v~sV~pG~w~~~gm~~~~~~~~~l~~~g~~~l~pe~~~~~l~ 450 (496)
T 3mje_A 378 AVWGS---GGQPGYAAANAYLDALAEHRR----SLGLTASSVAWGTWGEVGMATDPEVHDRLVRQGVLAMEPEHALGALD 450 (496)
T ss_dssp HHTTC---TTCHHHHHHHHHHHHHHHHHH----HTTCCCEEEEECEESSSCC------CHHHHHTTEEEECHHHHHHHHH
T ss_pred hcCCC---CCcHHHHHHHHHHHHHHHHHH----hcCCeEEEEECCcccCCccccChHHHHHHHhcCCCCCCHHHHHHHHH
Confidence 99887 888999999999999988655 5699999999998866544321 1468999999999
Q ss_pred HHhhhcccccccceeeeC
Q psy11190 226 QFIQSLGEAHNGGFFEYT 243 (248)
Q Consensus 226 ~~~~~~~~~~~g~~~~~~ 243 (248)
..+..........+++|+
T Consensus 451 ~~l~~~~~~~~v~~ldw~ 468 (496)
T 3mje_A 451 QMLENDDTAAAITLMDWE 468 (496)
T ss_dssp HHHHHTCSEEEECEECHH
T ss_pred HHHcCCCceEEEEEccHH
Confidence 999876665555565553
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.9e-29 Score=249.32 Aligned_cols=220 Identities=18% Similarity=0.188 Sum_probs=179.9
Q ss_pred ceEEEecCCCc-hhHHHHHHHHhCCCCCCceEEEee-cCchhHHHHH-HHHhh----cCCceeEEeeccCCchhhhhHHH
Q psy11190 2 KSILITGCNRG-LGLGMIKVLVGLGNNQPAHIFATC-RNKDKAVELL-ALAQQ----HSNLHVIELDVTDFSKQQDVLFK 74 (248)
Q Consensus 2 k~~lVtGas~g-iG~~ia~~l~~~g~~~~~~V~~~~-r~~~~~~~~~-~~~~~----~~~~~~~~~D~~~~~~~v~~~~~ 74 (248)
|++|||||++| ||+++|++|+++| ++|++++ |+.+++++.. ++... +.++.++.+|++|.++ ++.+++
T Consensus 653 KvaLVTGASgGgIG~aIAr~LA~~G----A~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~es-V~alv~ 727 (1878)
T 2uv9_A 653 KHALMTGAGAGSIGAEVLQGLLSGG----AKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQD-VEALVN 727 (1878)
T ss_dssp CEEEEESCCTTSHHHHHHHHHHHTT----CEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHH-HHHHHH
T ss_pred CEEEEECCCCcHHHHHHHHHHHHCC----CEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHH-HHHHHH
Confidence 79999999999 9999999999999 8999984 6666655442 22221 3468899999999999 999999
Q ss_pred Hhhhh---hcCCCccEEEeccccCCccc-cCCCCC--hhhhhheeeecchhhHHHHHH--HhHHHHhhhhcccCCCCCCC
Q psy11190 75 DISDV---VKDQGLNVLVNNAGIAAKFT-RLGLLK--PEQMTDHFLVNVTAPLMLTKT--MLPLLKKASEANSAAPLGSS 146 (248)
Q Consensus 75 ~i~~~---~~~~~iD~lv~~ag~~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~l~~~--~~~~l~~~~~~~~~~~~~~~ 146 (248)
++.+. +|. ++|+||||||+... . ++.+.+ .++|++.+++|+.+++++++. +++.|.++ +
T Consensus 728 ~i~~~~~~~G~-~IDiLVnNAGi~~~-~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~-----------~ 794 (1878)
T 2uv9_A 728 YIYDTKNGLGW-DLDYVVPFAAIPEN-GREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETR-----------P 794 (1878)
T ss_dssp HHHCSSSSCCC-CCSEEEECCCCCCT-TCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSC-----------C
T ss_pred HHHHhhcccCC-CCcEEEeCcccccC-CCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhC-----------C
Confidence 99887 541 49999999998765 4 778888 899999999999999999877 67777653 4
Q ss_pred CceEEEeecCCCcccccCCCCCccchhhHHHHHHHHHHHH-hhccCCCeEEEEecCccee-cCCCCC------------C
Q psy11190 147 RAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNAATRSLS-IDLKGDKIIATAMHPGWVK-TDMGGS------------N 212 (248)
Q Consensus 147 ~~~iv~vss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~la-~e~~~~~i~v~~v~PG~v~-t~~~~~------------~ 212 (248)
.|+||++||.++..+ +...|+++|+++.+|++.++ .+++++ |+||+|+||+++ |+|... .
T Consensus 795 ~G~IVnISS~ag~~g-----g~~aYaASKAAL~aLt~~laAeEla~~-IrVNaVaPG~V~gT~m~~~~~~~~~~~~~~pl 868 (1878)
T 2uv9_A 795 AQVILPLSPNHGTFG-----NDGLYSESKLALETLFNRWYSESWGNY-LTICGAVIGWTRGTGLMSANNLVAEGVEKLGV 868 (1878)
T ss_dssp EEECCEECSCSSSSS-----CCSSHHHHHHHHTTHHHHHHHSTTTTT-EEEEEEEECCBCCTTSCSHHHHTHHHHHTTTC
T ss_pred CCEEEEEcchhhccC-----CchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEecceecCcccccchhhHHHHHhcCC
Confidence 589999999998765 36789999999999988665 558776 999999999999 998642 1
Q ss_pred CCCchhhHHHHHHHHhhhcc-cccccceeee--CCe
Q psy11190 213 APLEVGAATAGIIQFIQSLG-EAHNGGFFEY--TGK 245 (248)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~--~g~ 245 (248)
...+|++++..++.++++.. ...+|+.+.+ ||.
T Consensus 869 r~~sPeEVA~avlfLaSd~a~s~iTGq~I~VDVDGG 904 (1878)
T 2uv9_A 869 RTFSQQEMAFNLLGLMAPAIVNLCQSDPVFADLNGG 904 (1878)
T ss_dssp CCBCHHHHHHHHHHHHSHHHHHHHTTSCEEEEESCS
T ss_pred CCCCHHHHHHHHHHHhCCcccccccCcEEEEEcCCC
Confidence 24589999999999988765 6778887765 354
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.8e-28 Score=231.46 Aligned_cols=201 Identities=19% Similarity=0.208 Sum_probs=168.6
Q ss_pred ceEEEecCCCchhHHHHHHHH-hCCCCCCceEEEeecC---chhHHHH-HHHHhhcCCceeEEeeccCCchhhhhHHHHh
Q psy11190 2 KSILITGCNRGLGLGMIKVLV-GLGNNQPAHIFATCRN---KDKAVEL-LALAQQHSNLHVIELDVTDFSKQQDVLFKDI 76 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~-~~g~~~~~~V~~~~r~---~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i 76 (248)
|++|||||++|||+++|++|+ ++|+ .+|++++|+ .+.++++ .++...+.++.+++||++|.++ ++++++++
T Consensus 531 ~~~lItGg~~GlG~aiA~~la~~~Ga---~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~-v~~~~~~~ 606 (795)
T 3slk_A 531 GTVLVTGGTGALGAEVARHLVIERGV---RNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRET-LAKVLASI 606 (795)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTSSC---CEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHH-HHHHHHTS
T ss_pred cceeeccCCCCcHHHHHHHHHHHcCC---cEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHH-HHHHHHHH
Confidence 789999999999999999999 8993 379999998 3445555 3444445689999999999999 99999998
Q ss_pred hhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecC
Q psy11190 77 SDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSI 156 (248)
Q Consensus 77 ~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~ 156 (248)
.+.+ ++|+||||||+... ..+.+++.++|++.+++|+.|++++.+.+.+.| +||++||.
T Consensus 607 ~~~~---~id~lVnnAGv~~~-~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l-----------------~iV~~SS~ 665 (795)
T 3slk_A 607 PDEH---PLTAVVHAAGVLDD-GVSESLTVERLDQVLRPKVDGARNLLELIDPDV-----------------ALVLFSSV 665 (795)
T ss_dssp CTTS---CEEEEEECCCCCCC-CCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS-----------------EEEEEEET
T ss_pred HHhC---CCEEEEECCCcCCC-CchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC-----------------EEEEEccH
Confidence 8764 49999999999876 788899999999999999999999999987654 49999999
Q ss_pred CCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC--------------CCCCchhhHHH
Q psy11190 157 MGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS--------------NAPLEVGAATA 222 (248)
Q Consensus 157 ~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~--------------~~~~~~~~~~~ 222 (248)
++..+. +++..|+++|+ |+++|++++.++||++|+|+||+++|+++.. ..+.++++...
T Consensus 666 ag~~g~---~g~~~YaAaka----~~~alA~~~~~~Gi~v~sI~pG~v~t~g~~~~~~~~~~~~~~~~g~~~l~~~e~~~ 738 (795)
T 3slk_A 666 SGVLGS---GGQGNYAAANS----FLDALAQQRQSRGLPTRSLAWGPWAEHGMASTLREAEQDRLARSGLLPISTEEGLS 738 (795)
T ss_dssp HHHHTC---SSCHHHHHHHH----HHHHHHHHHHHTTCCEEEEEECCCSCCCHHHHHHHHHHHHHHHTTBCCCCHHHHHH
T ss_pred HhcCCC---CCCHHHHHHHH----HHHHHHHHHHHcCCeEEEEECCeECcchhhccccHHHHHHHHhcCCCCCCHHHHHH
Confidence 999888 88999999996 6666666777889999999999999875321 23678888988
Q ss_pred HHHHHhhhcccc
Q psy11190 223 GIIQFIQSLGEA 234 (248)
Q Consensus 223 ~~~~~~~~~~~~ 234 (248)
.+...+......
T Consensus 739 ~~~~~l~~~~~~ 750 (795)
T 3slk_A 739 QFDAACGGAHTV 750 (795)
T ss_dssp HHHHHHTSSCSS
T ss_pred HHHHHHhCCCcE
Confidence 888888765443
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=5.5e-27 Score=210.55 Aligned_cols=202 Identities=21% Similarity=0.196 Sum_probs=163.6
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCch---hHHHHH-HHHhhcCCceeEEeeccCCchhhhhHHHHhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKD---KAVELL-ALAQQHSNLHVIELDVTDFSKQQDVLFKDIS 77 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~---~~~~~~-~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~ 77 (248)
|++|||||+||||++++++|+++|+ .+|++++|+.. .++++. ++...+.++.++.+|++|.++ ++.+++.+.
T Consensus 227 ~~vLITGgtGgIG~~la~~La~~G~---~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~-v~~~~~~i~ 302 (486)
T 2fr1_A 227 GTVLVTGGTGGVGGQIARWLARRGA---PHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRES-VRELLGGIG 302 (486)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHTC---SEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHH-HHHHHHTSC
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCC---CEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHH-HHHHHHHHH
Confidence 6899999999999999999999993 36999999875 344443 343345578999999999999 999999884
Q ss_pred hhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCC
Q psy11190 78 DVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIM 157 (248)
Q Consensus 78 ~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~ 157 (248)
.++ ++|+||||||.... ..+.+.+.+++++.+++|+.+++++.+.+.+. +.++||++||.+
T Consensus 303 -~~g--~ld~VIh~AG~~~~-~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~---------------~~~~~V~~SS~a 363 (486)
T 2fr1_A 303 -DDV--PLSAVFHAAATLDD-GTVDTLTGERIERASRAKVLGARNLHELTREL---------------DLTAFVLFSSFA 363 (486)
T ss_dssp -TTS--CEEEEEECCCCCCC-CCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTS---------------CCSEEEEEEEHH
T ss_pred -hcC--CCcEEEECCccCCC-CccccCCHHHHHHHHHHHHHHHHHHHHHhCcC---------------CCCEEEEEcChH
Confidence 344 69999999998765 67778899999999999999999999876542 468999999999
Q ss_pred CcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecC-CCCCC----------CCCchhhHHHHHHH
Q psy11190 158 GSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTD-MGGSN----------APLEVGAATAGIIQ 226 (248)
Q Consensus 158 ~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~-~~~~~----------~~~~~~~~~~~~~~ 226 (248)
+..+. +++..|+++|++++.|++.++ .+|+++++|+||++.++ |.... ...+++++++.+..
T Consensus 364 ~~~g~---~g~~~Yaaaka~l~~la~~~~----~~gi~v~~i~pG~~~~~gm~~~~~~~~~~~~g~~~i~~e~~a~~l~~ 436 (486)
T 2fr1_A 364 SAFGA---PGLGGYAPGNAYLDGLAQQRR----SDGLPATAVAWGTWAGSGMAEGPVADRFRRHGVIEMPPETACRALQN 436 (486)
T ss_dssp HHTCC---TTCTTTHHHHHHHHHHHHHHH----HTTCCCEEEEECCBC------------CTTTTEECBCHHHHHHHHHH
T ss_pred hcCCC---CCCHHHHHHHHHHHHHHHHHH----hcCCeEEEEECCeeCCCcccchhHHHHHHhcCCCCCCHHHHHHHHHH
Confidence 98887 788999999999999877655 46899999999999876 43221 25789999999999
Q ss_pred Hhhhccc
Q psy11190 227 FIQSLGE 233 (248)
Q Consensus 227 ~~~~~~~ 233 (248)
.+.....
T Consensus 437 ~l~~~~~ 443 (486)
T 2fr1_A 437 ALDRAEV 443 (486)
T ss_dssp HHHTTCS
T ss_pred HHhCCCC
Confidence 9876543
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1e-26 Score=239.68 Aligned_cols=213 Identities=18% Similarity=0.200 Sum_probs=163.4
Q ss_pred ceEEEecCCCc-hhHHHHHHHHhCCCCCCceEEEeecCchh-----HHHHHHHHh-hcCCceeEEeeccCCchhhhhHHH
Q psy11190 2 KSILITGCNRG-LGLGMIKVLVGLGNNQPAHIFATCRNKDK-----AVELLALAQ-QHSNLHVIELDVTDFSKQQDVLFK 74 (248)
Q Consensus 2 k~~lVtGas~g-iG~~ia~~l~~~g~~~~~~V~~~~r~~~~-----~~~~~~~~~-~~~~~~~~~~D~~~~~~~v~~~~~ 74 (248)
|++|||||++| ||+++|+.|+++| ++|++++|+.+. ++++.+... .+.++.++++|++|.++ ++++++
T Consensus 2137 KvaLVTGAs~GsIG~AiA~~La~~G----A~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~-v~~lv~ 2211 (3089)
T 3zen_D 2137 EVAVVTGASKGSIAASVVGQLLDGG----ATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSD-IDKLVE 2211 (3089)
T ss_dssp CEEEEESCCTTSHHHHHHHHHHHTT----CEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHH-HHHHHH
T ss_pred CEEEEeCCChhHHHHHHHHHHHHCC----CEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHH-HHHHHH
Confidence 79999999999 9999999999999 999999998776 444433332 34467889999999999 999999
Q ss_pred Hhhh----hhcCCCccEEEeccccC----CccccCCCCChhhhhhe----eeecchhhHHHHHHHhHHHHhhhhcccCCC
Q psy11190 75 DISD----VVKDQGLNVLVNNAGIA----AKFTRLGLLKPEQMTDH----FLVNVTAPLMLTKTMLPLLKKASEANSAAP 142 (248)
Q Consensus 75 ~i~~----~~~~~~iD~lv~~ag~~----~~~~~~~~~~~~~~~~~----~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~ 142 (248)
++.+ .+| ++|+||||||+. .......+.+.++|++. +++|+.+.+.+++.+.+.|..+...
T Consensus 2212 ~i~~~~~~~fG--~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g----- 2284 (3089)
T 3zen_D 2212 WVGTEQTESLG--PQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIA----- 2284 (3089)
T ss_dssp HHTSCCEEEES--SSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCC-----
T ss_pred HHHhhhhhhcC--CCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-----
Confidence 9988 777 699999999982 11123344466667666 8999999999999999999875210
Q ss_pred CCCCCceEEEeecCCCcccccCCCCCccchhhHHHHHHHHHHHHhh--ccCCCeEEEEecCccee-cCCCCCCC------
Q psy11190 143 LGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNAATRSLSID--LKGDKIIATAMHPGWVK-TDMGGSNA------ 213 (248)
Q Consensus 143 ~~~~~~~iv~vss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e--~~~~~i~v~~v~PG~v~-t~~~~~~~------ 213 (248)
...+.+++.++..+.. ++...|++||+|+.+|+++|+.| +++ +|+||+|.||+|+ |++.....
T Consensus 2285 --~~~~ii~~~ss~~g~~-----g~~~aYsASKaAl~~LtrslA~E~~~a~-~IrVn~v~PG~v~tT~l~~~~~~~~~~~ 2356 (3089)
T 3zen_D 2285 --SRLHVVLPGSPNRGMF-----GGDGAYGEAKSALDALENRWSAEKSWAE-RVSLAHALIGWTKGTGLMGQNDAIVSAV 2356 (3089)
T ss_dssp --CCEEEEEEECSSTTSC-----SSCSSHHHHGGGHHHHHHHHHHCSTTTT-TEEEEEEECCCEECSTTTTTTTTTHHHH
T ss_pred --ceeEEEEECCcccccC-----CCchHHHHHHHHHHHHHHHHHhccccCC-CeEEEEEeecccCCCcccccchhHHHHH
Confidence 0112233333332221 34568999999999999999999 765 6999999999999 77654321
Q ss_pred ------CCchhhHHHHHHHHhhhcccc
Q psy11190 214 ------PLEVGAATAGIIQFIQSLGEA 234 (248)
Q Consensus 214 ------~~~~~~~~~~~~~~~~~~~~~ 234 (248)
..+|+|++..+++++++....
T Consensus 2357 ~~~~~r~~~PeEIA~avlfLaS~~a~~ 2383 (3089)
T 3zen_D 2357 EEAGVTTYTTDEMAAMLLDLCTVETKV 2383 (3089)
T ss_dssp GGGSCBCEEHHHHHHHHHHTTSHHHHH
T ss_pred HhcCCCCCCHHHHHHHHHHHhChhhhh
Confidence 247999999999999876544
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.8e-26 Score=208.08 Aligned_cols=199 Identities=21% Similarity=0.235 Sum_probs=165.0
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCch---hHHHH-HHHHhhcCCceeEEeeccCCchhhhhHHHHhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKD---KAVEL-LALAQQHSNLHVIELDVTDFSKQQDVLFKDIS 77 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~---~~~~~-~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~ 77 (248)
|++|||||+||||++++++|+++|+ .+|++++|+.. .++++ .++...+.++.++.+|++|.++ ++.+++.
T Consensus 260 ~~vLITGgtGgIG~~lA~~La~~G~---~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~-v~~~~~~-- 333 (511)
T 2z5l_A 260 GTVLITGGMGAIGRRLARRLAAEGA---ERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDA-LAALVTA-- 333 (511)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTC---SEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHH-HHHHHHH--
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC---cEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHH-HHHHHhc--
Confidence 7899999999999999999999993 37999999864 34444 3333335578899999999988 8887765
Q ss_pred hhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCC
Q psy11190 78 DVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIM 157 (248)
Q Consensus 78 ~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~ 157 (248)
+ ++|+||||||.... ..+.+.+.++++..+++|+.+.+++.+.+.+.. +.++||++||.+
T Consensus 334 ---~--~ld~VVh~AGv~~~-~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~--------------~~~~~V~~SS~a 393 (511)
T 2z5l_A 334 ---Y--PPNAVFHTAGILDD-AVIDTLSPESFETVRGAKVCGAELLHQLTADIK--------------GLDAFVLFSSVT 393 (511)
T ss_dssp ---S--CCSEEEECCCCCCC-BCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCT--------------TCCCEEEEEEGG
T ss_pred ---C--CCcEEEECCcccCC-cccccCCHHHHHHHHHHHHHHHHHHHHHHhhcc--------------CCCEEEEEeCHH
Confidence 3 59999999998765 677788999999999999999999988764421 357899999999
Q ss_pred CcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcce-ecCCCCCC----------CCCchhhHHHHHHH
Q psy11190 158 GSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWV-KTDMGGSN----------APLEVGAATAGIIQ 226 (248)
Q Consensus 158 ~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v-~t~~~~~~----------~~~~~~~~~~~~~~ 226 (248)
+.++. +++..|+++|++++.|++.++ .+|+++++|+||++ +|+|.... ..++++++++.+..
T Consensus 394 ~~~g~---~g~~~YaaaKa~ld~la~~~~----~~gi~v~sv~pG~~~~tgm~~~~~~~~~~~~g~~~l~~e~~a~~l~~ 466 (511)
T 2z5l_A 394 GTWGN---AGQGAYAAANAALDALAERRR----AAGLPATSVAWGLWGGGGMAAGAGEESLSRRGLRAMDPDAAVDALLG 466 (511)
T ss_dssp GTTCC---TTBHHHHHHHHHHHHHHHHHH----TTTCCCEEEEECCBCSTTCCCCHHHHHHHHHTBCCBCHHHHHHHHHH
T ss_pred hcCCC---CCCHHHHHHHHHHHHHHHHHH----HcCCcEEEEECCcccCCcccccccHHHHHhcCCCCCCHHHHHHHHHH
Confidence 98887 788999999999999998764 56999999999999 88887542 36889999999999
Q ss_pred Hhhhccc
Q psy11190 227 FIQSLGE 233 (248)
Q Consensus 227 ~~~~~~~ 233 (248)
.+.....
T Consensus 467 al~~~~~ 473 (511)
T 2z5l_A 467 AMGRNDV 473 (511)
T ss_dssp HHHHTCS
T ss_pred HHhCCCC
Confidence 9976543
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.8e-25 Score=186.05 Aligned_cols=182 Identities=15% Similarity=0.065 Sum_probs=145.9
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
||++|||||+|+||++++++|+++| ++|++++|+..+.. ..++.++.+|++|.++ +..+++
T Consensus 3 ~k~vlVTGasg~IG~~la~~L~~~G----~~V~~~~r~~~~~~--------~~~~~~~~~Dl~d~~~-~~~~~~------ 63 (267)
T 3rft_A 3 MKRLLVTGAAGQLGRVMRERLAPMA----EILRLADLSPLDPA--------GPNEECVQCDLADANA-VNAMVA------ 63 (267)
T ss_dssp EEEEEEESTTSHHHHHHHHHTGGGE----EEEEEEESSCCCCC--------CTTEEEEECCTTCHHH-HHHHHT------
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcC----CEEEEEecCCcccc--------CCCCEEEEcCCCCHHH-HHHHHc------
Confidence 5799999999999999999999999 99999999976532 4578999999999888 666543
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
++|+||||||.. +.+.+++.+++|+.+++++++.+.+. +.++||++||..+..
T Consensus 64 ---~~D~vi~~Ag~~---------~~~~~~~~~~~N~~g~~~l~~a~~~~---------------~~~~iv~~SS~~~~g 116 (267)
T 3rft_A 64 ---GCDGIVHLGGIS---------VEKPFEQILQGNIIGLYNLYEAARAH---------------GQPRIVFASSNHTIG 116 (267)
T ss_dssp ---TCSEEEECCSCC---------SCCCHHHHHHHHTHHHHHHHHHHHHT---------------TCCEEEEEEEGGGGT
T ss_pred ---CCCEEEECCCCc---------CcCCHHHHHHHHHHHHHHHHHHHHHc---------------CCCEEEEEcchHHhC
Confidence 399999999973 33567889999999999999998432 468999999987762
Q ss_pred cc---------cCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC---CCchhhHHHHHHHHh
Q psy11190 161 ED---------NTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA---PLEVGAATAGIIQFI 228 (248)
Q Consensus 161 ~~---------~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~---~~~~~~~~~~~~~~~ 228 (248)
.. .+..+...|+.+|++.+.|++.++.++ |+++++|.||.+.+++..... ...++++++.+...+
T Consensus 117 ~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~a~~~---g~~~~~vr~~~v~~~~~~~~~~~~~~~~~d~a~~~~~~~ 193 (267)
T 3rft_A 117 YYPQTERLGPDVPARPDGLYGVSKCFGENLARMYFDKF---GQETALVRIGSCTPEPNNYRMLSTWFSHDDFVSLIEAVF 193 (267)
T ss_dssp TSBTTSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECBCSSSCCSTTHHHHBCCHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCeEEEEEeecccCCCCCCCceeeEEcHHHHHHHHHHHH
Confidence 11 122456789999999999999999875 678888888888877654432 457888888888777
Q ss_pred hhc
Q psy11190 229 QSL 231 (248)
Q Consensus 229 ~~~ 231 (248)
...
T Consensus 194 ~~~ 196 (267)
T 3rft_A 194 RAP 196 (267)
T ss_dssp HCS
T ss_pred hCC
Confidence 653
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.92 E-value=5.1e-24 Score=173.88 Aligned_cols=189 Identities=15% Similarity=0.183 Sum_probs=148.0
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCc-eeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNL-HVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|+++||||+|+||++++++|+++| ++|++++|+.++++++.. .++ .++++|++ ++ + .+.+
T Consensus 22 ~~ilVtGatG~iG~~l~~~L~~~G----~~V~~~~R~~~~~~~~~~-----~~~~~~~~~Dl~--~~-~-------~~~~ 82 (236)
T 3e8x_A 22 MRVLVVGANGKVARYLLSELKNKG----HEPVAMVRNEEQGPELRE-----RGASDIVVANLE--ED-F-------SHAF 82 (236)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT----CEEEEEESSGGGHHHHHH-----TTCSEEEECCTT--SC-C-------GGGG
T ss_pred CeEEEECCCChHHHHHHHHHHhCC----CeEEEEECChHHHHHHHh-----CCCceEEEcccH--HH-H-------HHHH
Confidence 689999999999999999999999 999999999887665432 367 89999998 44 3 3333
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+ ++|+||||||... .++++..+++|+.++.++++++.+. +.++||++||..+..
T Consensus 83 ~--~~D~vi~~ag~~~---------~~~~~~~~~~n~~~~~~l~~a~~~~---------------~~~~iv~~SS~~~~~ 136 (236)
T 3e8x_A 83 A--SIDAVVFAAGSGP---------HTGADKTILIDLWGAIKTIQEAEKR---------------GIKRFIMVSSVGTVD 136 (236)
T ss_dssp T--TCSEEEECCCCCT---------TSCHHHHHHTTTHHHHHHHHHHHHH---------------TCCEEEEECCTTCSC
T ss_pred c--CCCEEEECCCCCC---------CCCccccchhhHHHHHHHHHHHHHc---------------CCCEEEEEecCCCCC
Confidence 3 4999999999653 2467888999999999999887432 467999999976654
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC-----------CCCCchhhHHHHHHHHhh
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS-----------NAPLEVGAATAGIIQFIQ 229 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~-----------~~~~~~~~~~~~~~~~~~ 229 (248)
+.....+...|+.+|++++.+++ ..|++++.+.||++.++.... .....++++++.++..+.
T Consensus 137 ~~~~~~~~~~Y~~sK~~~e~~~~-------~~gi~~~~lrpg~v~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~ 209 (236)
T 3e8x_A 137 PDQGPMNMRHYLVAKRLADDELK-------RSSLDYTIVRPGPLSNEESTGKVTVSPHFSEITRSITRHDVAKVIAELVD 209 (236)
T ss_dssp GGGSCGGGHHHHHHHHHHHHHHH-------HSSSEEEEEEECSEECSCCCSEEEEESSCSCCCCCEEHHHHHHHHHHHTT
T ss_pred CCCChhhhhhHHHHHHHHHHHHH-------HCCCCEEEEeCCcccCCCCCCeEEeccCCCcccCcEeHHHHHHHHHHHhc
Confidence 42111346789999999999876 468999999999999987433 235679999999999998
Q ss_pred hcccccccceeeeCC
Q psy11190 230 SLGEAHNGGFFEYTG 244 (248)
Q Consensus 230 ~~~~~~~g~~~~~~g 244 (248)
... ..|+.|...+
T Consensus 210 ~~~--~~g~~~~v~~ 222 (236)
T 3e8x_A 210 QQH--TIGKTFEVLN 222 (236)
T ss_dssp CGG--GTTEEEEEEE
T ss_pred Ccc--ccCCeEEEeC
Confidence 743 5666666644
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=6.2e-23 Score=165.77 Aligned_cols=177 Identities=15% Similarity=0.105 Sum_probs=136.5
Q ss_pred CceEEEecCCCchhHHHHHHHH-hCCCCCCceEEEeecCch-hHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLV-GLGNNQPAHIFATCRNKD-KAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~-~~g~~~~~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
||+++||||+|+||++++++|+ ++| ++|++++|+.+ +++++. ....++.++++|++|.++ ++.+++
T Consensus 5 mk~vlVtGasg~iG~~~~~~l~~~~g----~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~D~~d~~~-~~~~~~---- 72 (221)
T 3r6d_A 5 YXYITILGAAGQIAQXLTATLLTYTD----MHITLYGRQLKTRIPPEI---IDHERVTVIEGSFQNPGX-LEQAVT---- 72 (221)
T ss_dssp CSEEEEESTTSHHHHHHHHHHHHHCC----CEEEEEESSHHHHSCHHH---HTSTTEEEEECCTTCHHH-HHHHHT----
T ss_pred EEEEEEEeCCcHHHHHHHHHHHhcCC----ceEEEEecCccccchhhc---cCCCceEEEECCCCCHHH-HHHHHc----
Confidence 5789999999999999999999 899 99999999987 554432 235688999999999887 655542
Q ss_pred hhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 79 VVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
++|+||||||.. |+. ++.+++.++++ +.++||++||..+
T Consensus 73 -----~~d~vv~~ag~~--------------------n~~-----~~~~~~~~~~~-----------~~~~iv~iSs~~~ 111 (221)
T 3r6d_A 73 -----NAEVVFVGAMES--------------------GSD-----MASIVKALSRX-----------NIRRVIGVSMAGL 111 (221)
T ss_dssp -----TCSEEEESCCCC--------------------HHH-----HHHHHHHHHHT-----------TCCEEEEEEETTT
T ss_pred -----CCCEEEEcCCCC--------------------Chh-----HHHHHHHHHhc-----------CCCeEEEEeecee
Confidence 389999999852 222 78888888775 4679999999887
Q ss_pred cccccCCCCCc----------cchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecC-CCCCC-----------CCCc
Q psy11190 159 SIEDNTQGGFH----------PYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTD-MGGSN-----------APLE 216 (248)
Q Consensus 159 ~~~~~~~~~~~----------~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~-~~~~~-----------~~~~ 216 (248)
..+. +... .|+.+|.+++.+.+. .|++++.|.||++.++ ..... ...+
T Consensus 112 ~~~~---~~~~~~~~~~~~~~~y~~~K~~~e~~~~~-------~~i~~~~vrpg~v~~~~~~~~~~~~~~~~~~~~~~~~ 181 (221)
T 3r6d_A 112 SGEF---PVALEKWTFDNLPISYVQGERQARNVLRE-------SNLNYTILRLTWLYNDPEXTDYELIPEGAQFNDAQVS 181 (221)
T ss_dssp TSCS---CHHHHHHHHHTSCHHHHHHHHHHHHHHHH-------SCSEEEEEEECEEECCTTCCCCEEECTTSCCCCCEEE
T ss_pred cCCC---CcccccccccccccHHHHHHHHHHHHHHh-------CCCCEEEEechhhcCCCCCcceeeccCCccCCCceee
Confidence 6543 3222 799999999987753 5899999999999988 32211 1356
Q ss_pred hhhHHHHHHHHh--hhccccccccee
Q psy11190 217 VGAATAGIIQFI--QSLGEAHNGGFF 240 (248)
Q Consensus 217 ~~~~~~~~~~~~--~~~~~~~~g~~~ 240 (248)
++++++.++.++ +++....+..+.
T Consensus 182 ~~dvA~~~~~l~~~~~~~~~~~~~~~ 207 (221)
T 3r6d_A 182 REAVVKAIFDILHAADETPFHRTSIG 207 (221)
T ss_dssp HHHHHHHHHHHHTCSCCGGGTTEEEE
T ss_pred HHHHHHHHHHHHHhcChhhhhcceee
Confidence 899999999999 776655554443
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.90 E-value=8.4e-23 Score=175.23 Aligned_cols=209 Identities=16% Similarity=0.114 Sum_probs=154.5
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCc-hhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNK-DKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
||++|||||+|+||++++++|+++| +.|++++|+. .......+.....+++.++.+|++|.++ +..+++..
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~-~~~~~~~~--- 72 (347)
T 1orr_A 1 MAKLLITGGCGFLGSNLASFALSQG----IDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKND-VTRLITKY--- 72 (347)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTT----CEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHH-HHHHHHHH---
T ss_pred CcEEEEeCCCchhHHHHHHHHHhCC----CEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHH-HHHHHhcc---
Confidence 8899999999999999999999999 8999999864 2222222222234578899999999888 77776542
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
++|+|||+||.... +.+.++++..+++|+.++.++++++.+.. ..++||++||.+.+
T Consensus 73 ----~~d~vih~A~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~a~~~~~--------------~~~~iv~~SS~~v~ 129 (347)
T 1orr_A 73 ----MPDSCFHLAGQVAM-----TTSIDNPCMDFEINVGGTLNLLEAVRQYN--------------SNCNIIYSSTNKVY 129 (347)
T ss_dssp ----CCSEEEECCCCCCH-----HHHHHCHHHHHHHHHHHHHHHHHHHHHHC--------------TTCEEEEEEEGGGG
T ss_pred ----CCCEEEECCcccCh-----hhhhhCHHHHHHHHHHHHHHHHHHHHHhC--------------CCceEEEeccHHHh
Confidence 39999999996532 12345678889999999999999987753 23689999997643
Q ss_pred ccc------------------------cCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC---
Q psy11190 160 IED------------------------NTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN--- 212 (248)
Q Consensus 160 ~~~------------------------~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~--- 212 (248)
... .+..+...|+.+|.+.+.+++.++.++ |++++.+.||++.++.....
T Consensus 130 g~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~g~~~~~~~~~ 206 (347)
T 1orr_A 130 GDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIF---GLNTVVFRHSSMYGGRQFATYDQ 206 (347)
T ss_dssp TTCTTSCEEECSSCEEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTCCCBTTB
T ss_pred CCCCcCCcccccccccccccccCccccCCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEccCceeCcCCCCCCcC
Confidence 211 012345679999999999999999875 79999999999999864210
Q ss_pred -------------------C------------CCchhhHHHHHHHHhhhcccccccceeeeCC
Q psy11190 213 -------------------A------------PLEVGAATAGIIQFIQSLGEAHNGGFFEYTG 244 (248)
Q Consensus 213 -------------------~------------~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g 244 (248)
. ...++++++.++.++.. ....+|+.|...|
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~-~~~~~g~~~~v~~ 268 (347)
T 1orr_A 207 GWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLHAEDMISLYFTALAN-VSKIRGNAFNIGG 268 (347)
T ss_dssp CHHHHHHHHHHHHHTTCCCCEEEESSSCCEEECEEHHHHHHHHHHHHHT-HHHHTTCEEEESS
T ss_pred cHHHHHHHHHHhCcccCCCCeEEecCCcceEeeEEHHHHHHHHHHHHhc-cccCCCCEEEeCC
Confidence 1 12578888888887764 2234566666655
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=9.8e-23 Score=175.93 Aligned_cols=213 Identities=13% Similarity=0.082 Sum_probs=155.3
Q ss_pred CceEEEecCCCchhHHHHHHHHhC-CCCCCceEEEeecCc--hhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGL-GNNQPAHIFATCRNK--DKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDIS 77 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~-g~~~~~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~ 77 (248)
|| +|||||+|+||++++++|+++ | ++|++++|+. +..+.+.++. ...++.++.+|++|.++ +..++++.
T Consensus 1 Mk-vlVTGasG~iG~~l~~~L~~~~g----~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~-~~~~~~~~- 72 (361)
T 1kew_A 1 MK-ILITGGAGFIGSAVVRHIIKNTQ----DTVVNIDKLTYAGNLESLSDIS-ESNRYNFEHADICDSAE-ITRIFEQY- 72 (361)
T ss_dssp CE-EEEESTTSHHHHHHHHHHHHHCS----CEEEEEECCCTTCCGGGGTTTT-TCTTEEEEECCTTCHHH-HHHHHHHH-
T ss_pred CE-EEEECCCchHhHHHHHHHHhcCC----CeEEEEecCCCCCchhhhhhhh-cCCCeEEEECCCCCHHH-HHHHHhhc-
Confidence 64 999999999999999999998 6 8999999875 2222222111 24578899999999888 77766541
Q ss_pred hhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCC
Q psy11190 78 DVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIM 157 (248)
Q Consensus 78 ~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~ 157 (248)
++|+|||+||.... +.+.++++..+++|+.+++++++++.+.|..-+..+ ...++||++||.+
T Consensus 73 ------~~d~vih~A~~~~~-----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~------~~~~~iv~~SS~~ 135 (361)
T 1kew_A 73 ------QPDAVMHLAAESHV-----DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDK------KNNFRFHHISTDE 135 (361)
T ss_dssp ------CCSEEEECCSCCCH-----HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHH------HHHCEEEEEEEGG
T ss_pred ------CCCEEEECCCCcCh-----hhhhhCHHHHHHHHHHHHHHHHHHHHHhccCccccc------ccCceEEEeCCHH
Confidence 39999999997542 224466788899999999999999999875310000 0135899999975
Q ss_pred Cccccc------------------CCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC------
Q psy11190 158 GSIEDN------------------TQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA------ 213 (248)
Q Consensus 158 ~~~~~~------------------~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~------ 213 (248)
.+.... +..+...|+.+|++.+.+++.++.++ |++++.+.||.+.++......
T Consensus 136 v~g~~~~~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~~vrp~~v~G~~~~~~~~~~~~~ 212 (361)
T 1kew_A 136 VYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY---GLPTIVTNCSNNYGPYHFPEKLIPLVI 212 (361)
T ss_dssp GGCCCCCGGGSCTTSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTTSHHHHHH
T ss_pred HhCCCcccccccccccCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCcEEEEeeceeECCCCCcccHHHHHH
Confidence 322110 12456789999999999999999875 799999999999998753210
Q ss_pred --------------------CCchhhHHHHHHHHhhhcccccccceeeeCC
Q psy11190 214 --------------------PLEVGAATAGIIQFIQSLGEAHNGGFFEYTG 244 (248)
Q Consensus 214 --------------------~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g 244 (248)
...++++++.++.++... .+|+.|...+
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~---~~g~~~~v~~ 260 (361)
T 1kew_A 213 LNALEGKPLPIYGKGDQIRDWLYVEDHARALHMVVTEG---KAGETYNIGG 260 (361)
T ss_dssp HHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHC---CTTCEEEECC
T ss_pred HHHHcCCCceEcCCCceeEeeEEHHHHHHHHHHHHhCC---CCCCEEEecC
Confidence 135789999998888653 3566666655
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=99.89 E-value=5.5e-23 Score=168.06 Aligned_cols=177 Identities=16% Similarity=0.117 Sum_probs=137.2
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCc--eEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPA--HIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|+++||||+|+||++++++|+++| + +|++++|+.++..+.. ..++.++.+|++|.++ ++.+++
T Consensus 19 ~~vlVtGasg~iG~~l~~~L~~~G----~~~~V~~~~r~~~~~~~~~-----~~~~~~~~~D~~d~~~-~~~~~~----- 83 (242)
T 2bka_A 19 KSVFILGASGETGRVLLKEILEQG----LFSKVTLIGRRKLTFDEEA-----YKNVNQEVVDFEKLDD-YASAFQ----- 83 (242)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHHT----CCSEEEEEESSCCCCCSGG-----GGGCEEEECCGGGGGG-GGGGGS-----
T ss_pred CeEEEECCCcHHHHHHHHHHHcCC----CCCEEEEEEcCCCCccccc-----cCCceEEecCcCCHHH-HHHHhc-----
Confidence 689999999999999999999999 8 9999999976543221 2357889999999888 655432
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
++|+||||||.... .+.++..+++|+.++.++++.+.+ . +.++||++||..+.
T Consensus 84 ----~~d~vi~~ag~~~~--------~~~~~~~~~~n~~~~~~~~~~~~~----~-----------~~~~iv~~SS~~~~ 136 (242)
T 2bka_A 84 ----GHDVGFCCLGTTRG--------KAGAEGFVRVDRDYVLKSAELAKA----G-----------GCKHFNLLSSKGAD 136 (242)
T ss_dssp ----SCSEEEECCCCCHH--------HHHHHHHHHHHTHHHHHHHHHHHH----T-----------TCCEEEEECCTTCC
T ss_pred ----CCCEEEECCCcccc--------cCCcccceeeeHHHHHHHHHHHHH----C-----------CCCEEEEEccCcCC
Confidence 39999999997532 134677888999999888876533 2 45799999998775
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHhhccCCCe-EEEEecCcceecCCCCC-------------CC-------CCchh
Q psy11190 160 IEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKI-IATAMHPGWVKTDMGGS-------------NA-------PLEVG 218 (248)
Q Consensus 160 ~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i-~v~~v~PG~v~t~~~~~-------------~~-------~~~~~ 218 (248)
. .+...|+.+|++++.+++.++ + ++++|.||++.|++... .+ ...++
T Consensus 137 ~-----~~~~~Y~~sK~~~e~~~~~~~-------~~~~~~vrpg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (242)
T 2bka_A 137 K-----SSNFLYLQVKGEVEAKVEELK-------FDRYSVFRPGVLLCDRQESRPGEWLVRKFFGSLPDSWASGHSVPVV 204 (242)
T ss_dssp T-----TCSSHHHHHHHHHHHHHHTTC-------CSEEEEEECCEEECTTGGGSHHHHHHHHHHCSCCTTGGGGTEEEHH
T ss_pred C-----CCcchHHHHHHHHHHHHHhcC-------CCCeEEEcCceecCCCCCCcHHHHHHHHhhcccCccccCCcccCHH
Confidence 4 234679999999999987653 4 89999999999985321 11 24789
Q ss_pred hHHHHHHHHhhhcc
Q psy11190 219 AATAGIIQFIQSLG 232 (248)
Q Consensus 219 ~~~~~~~~~~~~~~ 232 (248)
++++.++.++++..
T Consensus 205 dva~~~~~~~~~~~ 218 (242)
T 2bka_A 205 TVVRAMLNNVVRPR 218 (242)
T ss_dssp HHHHHHHHHHTSCC
T ss_pred HHHHHHHHHHhCcc
Confidence 99999999887643
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.89 E-value=2.5e-22 Score=161.99 Aligned_cols=181 Identities=17% Similarity=0.257 Sum_probs=142.7
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccC-CchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTD-FSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~v~~~~~~i~~~~ 80 (248)
++++||||+|+||++++++|+++| ++|++++|+.++...+ .++.++++|++| .++ +.+++
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g----~~V~~~~R~~~~~~~~-------~~~~~~~~D~~d~~~~-~~~~~------- 61 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTD----YQIYAGARKVEQVPQY-------NNVKAVHFDVDWTPEE-MAKQL------- 61 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSS----CEEEEEESSGGGSCCC-------TTEEEEECCTTSCHHH-HHTTT-------
T ss_pred CeEEEECCCCHHHHHHHHHHHHCC----CEEEEEECCccchhhc-------CCceEEEecccCCHHH-HHHHH-------
Confidence 159999999999999999999999 9999999998764322 578999999999 766 44443
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
. ++|+||||||.... ..+++|+.++.++++.+.. . +.++||++||..+..
T Consensus 62 ~--~~d~vi~~ag~~~~-------------~~~~~n~~~~~~l~~a~~~----~-----------~~~~iv~~SS~~~~~ 111 (219)
T 3dqp_A 62 H--GMDAIINVSGSGGK-------------SLLKVDLYGAVKLMQAAEK----A-----------EVKRFILLSTIFSLQ 111 (219)
T ss_dssp T--TCSEEEECCCCTTS-------------SCCCCCCHHHHHHHHHHHH----T-----------TCCEEEEECCTTTTC
T ss_pred c--CCCEEEECCcCCCC-------------CcEeEeHHHHHHHHHHHHH----h-----------CCCEEEEECcccccC
Confidence 2 39999999997532 2788899999988887733 2 457899999988765
Q ss_pred cccCCCC-------CccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC--------CCCCchhhHHHHHH
Q psy11190 161 EDNTQGG-------FHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS--------NAPLEVGAATAGII 225 (248)
Q Consensus 161 ~~~~~~~-------~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~--------~~~~~~~~~~~~~~ 225 (248)
+. +. ...|+.+|.+.+.+++ ...|++++.+.||++.++.... .....++++++.++
T Consensus 112 ~~---~~~e~~~~~~~~Y~~sK~~~e~~~~------~~~~i~~~ilrp~~v~g~~~~~~~~~~~~~~~~i~~~Dva~~i~ 182 (219)
T 3dqp_A 112 PE---KWIGAGFDALKDYYIAKHFADLYLT------KETNLDYTIIQPGALTEEEATGLIDINDEVSASNTIGDVADTIK 182 (219)
T ss_dssp GG---GCCSHHHHHTHHHHHHHHHHHHHHH------HSCCCEEEEEEECSEECSCCCSEEEESSSCCCCEEHHHHHHHHH
T ss_pred CC---cccccccccccHHHHHHHHHHHHHH------hccCCcEEEEeCceEecCCCCCccccCCCcCCcccHHHHHHHHH
Confidence 44 33 6689999999999886 3678999999999999876432 23568999999999
Q ss_pred HHhhhcccccccceeee
Q psy11190 226 QFIQSLGEAHNGGFFEY 242 (248)
Q Consensus 226 ~~~~~~~~~~~g~~~~~ 242 (248)
..+..+. ..|+.|..
T Consensus 183 ~~l~~~~--~~g~~~~i 197 (219)
T 3dqp_A 183 ELVMTDH--SIGKVISM 197 (219)
T ss_dssp HHHTCGG--GTTEEEEE
T ss_pred HHHhCcc--ccCcEEEe
Confidence 9998743 34666665
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=4.6e-22 Score=163.07 Aligned_cols=200 Identities=16% Similarity=0.076 Sum_probs=144.5
Q ss_pred CceEEEecCCCchhHHHHHHHHhC--CCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGL--GNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~--g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
||+++||||+|+||++++++|+++ | ++|++++|+.++.+++ ..++.++.+|++|.++ +.++++
T Consensus 4 ~~~ilVtGasG~iG~~l~~~l~~~~~g----~~V~~~~r~~~~~~~~------~~~~~~~~~D~~d~~~-~~~~~~---- 68 (253)
T 1xq6_A 4 LPTVLVTGASGRTGQIVYKKLKEGSDK----FVAKGLVRSAQGKEKI------GGEADVFIGDITDADS-INPAFQ---- 68 (253)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTTT----CEEEEEESCHHHHHHT------TCCTTEEECCTTSHHH-HHHHHT----
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhcCCC----cEEEEEEcCCCchhhc------CCCeeEEEecCCCHHH-HHHHHc----
Confidence 578999999999999999999999 6 8999999987654432 3577899999999877 555532
Q ss_pred hhcCCCccEEEeccccCCcccc--------CCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceE
Q psy11190 79 VVKDQGLNVLVNNAGIAAKFTR--------LGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAI 150 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~~~~--------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~i 150 (248)
++|+||||||....... ..+...+.+++.+++|+.++.++++.+.+. +.++|
T Consensus 69 -----~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~---------------~~~~i 128 (253)
T 1xq6_A 69 -----GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA---------------GVKHI 128 (253)
T ss_dssp -----TCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH---------------TCSEE
T ss_pred -----CCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHc---------------CCCEE
Confidence 39999999997643110 012233445567889999998888776442 45789
Q ss_pred EEeecCCCcccccCCCCC--ccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC---------------C
Q psy11190 151 VNVSSIMGSIEDNTQGGF--HPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN---------------A 213 (248)
Q Consensus 151 v~vss~~~~~~~~~~~~~--~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~---------------~ 213 (248)
|++||..+..+..+...+ ..|+.+|.+++.+++. .|++++.+.||++.++..... .
T Consensus 129 v~~SS~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~-------~~i~~~~vrpg~v~~~~~~~~~~~~~~~~~~~~~~~~ 201 (253)
T 1xq6_A 129 VVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLAD-------SGTPYTIIRAGGLLDKEGGVRELLVGKDDELLQTDTK 201 (253)
T ss_dssp EEEEETTTTCTTCGGGGGGGCCHHHHHHHHHHHHHT-------SSSCEEEEEECEEECSCSSSSCEEEESTTGGGGSSCC
T ss_pred EEEcCccCCCCCCccccccchhHHHHHHHHHHHHHh-------CCCceEEEecceeecCCcchhhhhccCCcCCcCCCCc
Confidence 999998875443111111 2466799999887752 689999999999999864211 1
Q ss_pred CCchhhHHHHHHHHhhhcccccccceeeeCC
Q psy11190 214 PLEVGAATAGIIQFIQSLGEAHNGGFFEYTG 244 (248)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g 244 (248)
...++++++.++..+.... ..|+.|...+
T Consensus 202 ~~~~~Dva~~~~~~~~~~~--~~g~~~~i~~ 230 (253)
T 1xq6_A 202 TVPRADVAEVCIQALLFEE--AKNKAFDLGS 230 (253)
T ss_dssp EEEHHHHHHHHHHHTTCGG--GTTEEEEEEE
T ss_pred EEcHHHHHHHHHHHHcCcc--ccCCEEEecC
Confidence 3478999999999887632 3555555544
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=99.88 E-value=5.4e-22 Score=169.74 Aligned_cols=206 Identities=14% Similarity=0.093 Sum_probs=153.7
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhh--cCCceeE-EeeccCCchhhhhHHHHhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQ--HSNLHVI-ELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~-~~D~~~~~~~v~~~~~~i~~ 78 (248)
|++|||||+|+||++++++|+++| ++|++++|+.++.+.+.+.... ..++.++ .+|++|.++ ++.+++
T Consensus 12 ~~vlVTGatG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~-~~~~~~---- 82 (342)
T 1y1p_A 12 SLVLVTGANGFVASHVVEQLLEHG----YKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGA-YDEVIK---- 82 (342)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT----CEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTT-TTTTTT----
T ss_pred CEEEEECCccHHHHHHHHHHHHCC----CEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHH-HHHHHc----
Confidence 689999999999999999999999 9999999998776655433321 2467788 899999888 555432
Q ss_pred hhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 79 VVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
++|+|||+||.... . +++++.+++|+.++.++++++.+. . +.++||++||...
T Consensus 83 -----~~d~vih~A~~~~~-~-------~~~~~~~~~n~~g~~~ll~~~~~~---~-----------~~~~iv~~SS~~~ 135 (342)
T 1y1p_A 83 -----GAAGVAHIASVVSF-S-------NKYDEVVTPAIGGTLNALRAAAAT---P-----------SVKRFVLTSSTVS 135 (342)
T ss_dssp -----TCSEEEECCCCCSC-C-------SCHHHHHHHHHHHHHHHHHHHHTC---T-----------TCCEEEEECCGGG
T ss_pred -----CCCEEEEeCCCCCC-C-------CCHHHHHHHHHHHHHHHHHHHHhC---C-----------CCcEEEEeccHHH
Confidence 39999999997543 1 345678889999999999987652 1 3578999999876
Q ss_pred cccccC----------------------------CCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCC
Q psy11190 159 SIEDNT----------------------------QGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGG 210 (248)
Q Consensus 159 ~~~~~~----------------------------~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~ 210 (248)
.....+ ..+...|+.+|.+.+.+++.++.++.+ +++++++.||.+.+++..
T Consensus 136 ~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~-~~~~~~~rp~~v~g~~~~ 214 (342)
T 1y1p_A 136 ALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKP-HFTLNAVLPNYTIGTIFD 214 (342)
T ss_dssp TCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCC-SSEEEEEEESEEECCCSC
T ss_pred hcCCCCCCCCcccCccccCchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHhcCC-CceEEEEcCCceECCCCC
Confidence 532110 012357999999999999999998866 899999999999998754
Q ss_pred CCC----------------------------CCchhhHHHHHHHHhhhcccccccceeeeCCee
Q psy11190 211 SNA----------------------------PLEVGAATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 211 ~~~----------------------------~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
... ...++++++.++..+... ..+|..+...|..
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~--~~~g~~~~~~g~~ 276 (342)
T 1y1p_A 215 PETQSGSTSGWMMSLFNGEVSPALALMPPQYYVSAVDIGLLHLGCLVLP--QIERRRVYGTAGT 276 (342)
T ss_dssp TTTCCCHHHHHHHHHHTTCCCHHHHTCCSEEEEEHHHHHHHHHHHHHCT--TCCSCEEEECCEE
T ss_pred CCCCCccHHHHHHHHHcCCCccccccCCcCCEeEHHHHHHHHHHHHcCc--ccCCceEEEeCCC
Confidence 310 135788898888887652 2344433345543
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=2.5e-22 Score=173.05 Aligned_cols=201 Identities=14% Similarity=0.184 Sum_probs=155.2
Q ss_pred CceEEEecCCCchhHHHHHHHHhC-CCCCCc-eEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGL-GNNQPA-HIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~-g~~~~~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
+|++|||||+|+||++++++|+++ | . .|++++|+..+...+.+... ..++.++.+|++|.++ +..+++
T Consensus 21 ~k~vlVTGatG~iG~~l~~~L~~~~g----~~~V~~~~r~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~-l~~~~~---- 90 (344)
T 2gn4_A 21 NQTILITGGTGSFGKCFVRKVLDTTN----AKKIIVYSRDELKQSEMAMEFN-DPRMRFFIGDVRDLER-LNYALE---- 90 (344)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHCC----CSEEEEEESCHHHHHHHHHHHC-CTTEEEEECCTTCHHH-HHHHTT----
T ss_pred CCEEEEECCCcHHHHHHHHHHHhhCC----CCEEEEEECChhhHHHHHHHhc-CCCEEEEECCCCCHHH-HHHHHh----
Confidence 378999999999999999999999 8 6 99999999877666644332 3578899999999877 555432
Q ss_pred hhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 79 VVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
++|+|||+||.... . ......+..+++|+.++.++++++.+. +.++||++||..+
T Consensus 91 -----~~D~Vih~Aa~~~~-~----~~~~~~~~~~~~Nv~gt~~l~~aa~~~---------------~v~~~V~~SS~~~ 145 (344)
T 2gn4_A 91 -----GVDICIHAAALKHV-P----IAEYNPLECIKTNIMGASNVINACLKN---------------AISQVIALSTDKA 145 (344)
T ss_dssp -----TCSEEEECCCCCCH-H----HHHHSHHHHHHHHHHHHHHHHHHHHHT---------------TCSEEEEECCGGG
T ss_pred -----cCCEEEECCCCCCC-C----chhcCHHHHHHHHHHHHHHHHHHHHhC---------------CCCEEEEecCCcc
Confidence 39999999997542 1 112345678899999999999998764 4578999999765
Q ss_pred cccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCC--------------C------C---CCC
Q psy11190 159 SIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGG--------------S------N---APL 215 (248)
Q Consensus 159 ~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~--------------~------~---~~~ 215 (248)
. .+...|+.+|++++.+++.++.++.+.|+++++|.||.+.++... + . ...
T Consensus 146 ~------~p~~~Y~~sK~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~~~i~~~~~~~~~g~~~~~i~~~~~~r~~i 219 (344)
T 2gn4_A 146 A------NPINLYGATKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRGSVVPFFKKLVQNKASEIPITDIRMTRFWI 219 (344)
T ss_dssp S------SCCSHHHHHHHHHHHHHHHGGGCCCSSCCEEEEECCCEETTCTTSHHHHHHHHHHHTCCCEEESCTTCEEEEE
T ss_pred C------CCccHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEEeccEECCCCCHHHHHHHHHHcCCCceEEeCCCeEEeeE
Confidence 4 235689999999999999999998888999999999999875311 0 0 125
Q ss_pred chhhHHHHHHHHhhhcccccccceeeeCCe
Q psy11190 216 EVGAATAGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
.++++++.++..+... ..|..+...+.
T Consensus 220 ~v~D~a~~v~~~l~~~---~~g~~~~~~~~ 246 (344)
T 2gn4_A 220 TLDEGVSFVLKSLKRM---HGGEIFVPKIP 246 (344)
T ss_dssp CHHHHHHHHHHHHHHC---CSSCEEEECCC
T ss_pred EHHHHHHHHHHHHhhc---cCCCEEecCCC
Confidence 6899999999888763 24555544443
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.88 E-value=4.8e-22 Score=170.33 Aligned_cols=172 Identities=16% Similarity=0.100 Sum_probs=130.4
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHH-HHHh-hcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELL-ALAQ-QHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~-~~~~-~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|++|||||+|+||++++++|+++| ++|++++|+.+...+.. ++.. ...++.++++|++|.++ +.++++.
T Consensus 6 ~~vlVTGatG~iG~~l~~~L~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~-~~~~~~~---- 76 (341)
T 3enk_A 6 GTILVTGGAGYIGSHTAVELLAHG----YDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERA-LARIFDA---- 76 (341)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT----CEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHH-HHHHHHH----
T ss_pred cEEEEecCCcHHHHHHHHHHHHCC----CcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHH-HHHHHhc----
Confidence 689999999999999999999999 99999999877655442 2222 24578999999999888 7776654
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
+ ++|+|||+||.... .. ..+..+..+++|+.++.++++.+ .+. +.++||++||.+.+
T Consensus 77 -~--~~d~vih~A~~~~~-~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~-----------~~~~iv~~SS~~~~ 133 (341)
T 3enk_A 77 -H--PITAAIHFAALKAV-GE----SVAKPIEYYRNNLDSLLSLLRVM----RER-----------AVKRIVFSSSATVY 133 (341)
T ss_dssp -S--CCCEEEECCCCCCH-HH----HHHCHHHHHHHHHHHHHHHHHHH----HHT-----------TCCEEEEEEEGGGB
T ss_pred -c--CCcEEEECcccccc-Cc----cccChHHHHHHHHHHHHHHHHHH----HhC-----------CCCEEEEEecceEe
Confidence 1 49999999997643 11 22344566778999988877654 332 45799999997654
Q ss_pred ccc--------cCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecC
Q psy11190 160 IED--------NTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTD 207 (248)
Q Consensus 160 ~~~--------~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~ 207 (248)
... .+..+...|+.+|.+.+.+++.++.++. +++++.+.|+.+..|
T Consensus 134 g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~--~~~~~~lRp~~v~G~ 187 (341)
T 3enk_A 134 GVPERSPIDETFPLSATNPYGQTKLMAEQILRDVEAADP--SWRVATLRYFNPVGA 187 (341)
T ss_dssp CSCSSSSBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHCT--TCEEEEEEECEEECC
T ss_pred cCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHhhcCC--CceEEEEeeccccCC
Confidence 221 1112346899999999999999998864 599999999988776
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=3.1e-22 Score=172.69 Aligned_cols=198 Identities=17% Similarity=0.144 Sum_probs=151.3
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||+|+||++++++|+++| ++|++++|+.++...+.+......++.++++|++|.++ +..+++.+
T Consensus 10 ~~vlVtGatG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~-~~~~~~~~----- 79 (357)
T 1rkx_A 10 KRVFVTGHTGFKGGWLSLWLQTMG----ATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNK-LLESIREF----- 79 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT----CEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHH-HHHHHHHH-----
T ss_pred CEEEEECCCchHHHHHHHHHHhCC----CeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHH-HHHHHHhc-----
Confidence 689999999999999999999999 89999999876654443333234578999999999888 77776654
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+|||+||.... ..+.++++..+++|+.++.++++++.+. . ..++||++||...+..
T Consensus 80 --~~d~vih~A~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~------------~~~~~v~~SS~~vyg~ 138 (357)
T 1rkx_A 80 --QPEIVFHMAAQPLV-----RLSYSEPVETYSTNVMGTVYLLEAIRHV--G------------GVKAVVNITSDKCYDN 138 (357)
T ss_dssp --CCSEEEECCSCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHHH--C------------CCCEEEEECCGGGBCC
T ss_pred --CCCEEEECCCCccc-----ccchhCHHHHHHHHHHHHHHHHHHHHHh--C------------CCCeEEEecCHHHhCC
Confidence 29999999996322 1235667888999999999999998653 1 2578999999764321
Q ss_pred c------c---CCCCCccchhhHHHHHHHHHHHHhhcc------CCCeEEEEecCcceecCCCCCC--------------
Q psy11190 162 D------N---TQGGFHPYRCSKAALNAATRSLSIDLK------GDKIIATAMHPGWVKTDMGGSN-------------- 212 (248)
Q Consensus 162 ~------~---~~~~~~~y~~sK~a~~~~~~~la~e~~------~~~i~v~~v~PG~v~t~~~~~~-------------- 212 (248)
. . +..+...|+.+|.+.+.+++.++.++. +.|++++.+.||.+.+|.....
T Consensus 139 ~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g 218 (357)
T 1rkx_A 139 KEWIWGYRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQS 218 (357)
T ss_dssp CCSSSCBCTTSCBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTT
T ss_pred CCcCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcC
Confidence 1 0 223567899999999999999998874 3589999999999998754210
Q ss_pred ------------CCCchhhHHHHHHHHhhh
Q psy11190 213 ------------APLEVGAATAGIIQFIQS 230 (248)
Q Consensus 213 ------------~~~~~~~~~~~~~~~~~~ 230 (248)
....++++++.++..+..
T Consensus 219 ~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~ 248 (357)
T 1rkx_A 219 QPVIIRNPHAIRPWQHVLEPLSGYLLLAQK 248 (357)
T ss_dssp CCEECSCTTCEECCEETHHHHHHHHHHHHH
T ss_pred CCEEECCCCCeeccEeHHHHHHHHHHHHHh
Confidence 023567888888877754
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.1e-21 Score=158.80 Aligned_cols=193 Identities=14% Similarity=0.085 Sum_probs=144.8
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
||++|||||+|+||++++++|+++| ++|++++|+.++...+ ..++.++++|++|.++ +..+++
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~------~~~~~~~~~Dl~d~~~-~~~~~~------ 66 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRG----FEVTAVVRHPEKIKIE------NEHLKVKKADVSSLDE-VCEVCK------ 66 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTT----CEEEEECSCGGGCCCC------CTTEEEECCCTTCHHH-HHHHHT------
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCC----CEEEEEEcCcccchhc------cCceEEEEecCCCHHH-HHHHhc------
Confidence 6789999999999999999999999 9999999998764321 2578899999999887 555432
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
++|+|||+||.... . ...+++|+.++.++++.+.+. +..++|++||.....
T Consensus 67 ---~~d~vi~~a~~~~~-------~----~~~~~~n~~~~~~l~~~~~~~---------------~~~~~v~~Ss~~~~~ 117 (227)
T 3dhn_A 67 ---GADAVISAFNPGWN-------N----PDIYDETIKVYLTIIDGVKKA---------------GVNRFLMVGGAGSLF 117 (227)
T ss_dssp ---TCSEEEECCCC-----------------CCSHHHHHHHHHHHHHHHT---------------TCSEEEEECCSTTSE
T ss_pred ---CCCEEEEeCcCCCC-------C----hhHHHHHHHHHHHHHHHHHHh---------------CCCEEEEeCChhhcc
Confidence 39999999986421 1 126778888888887776442 346899999987665
Q ss_pred ccc-------CCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC----------------CCch
Q psy11190 161 EDN-------TQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA----------------PLEV 217 (248)
Q Consensus 161 ~~~-------~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~----------------~~~~ 217 (248)
+.+ +..+...|+.+|.+.+.+.+.++.+ .+++++.+.||++.++...... ...+
T Consensus 118 ~~~~~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~i~~ 194 (227)
T 3dhn_A 118 IAPGLRLMDSGEVPENILPGVKALGEFYLNFLMKE---KEIDWVFFSPAADMRPGVRTGRYRLGKDDMIVDIVGNSHISV 194 (227)
T ss_dssp EETTEEGGGTTCSCGGGHHHHHHHHHHHHHTGGGC---CSSEEEEEECCSEEESCCCCCCCEEESSBCCCCTTSCCEEEH
T ss_pred CCCCCccccCCcchHHHHHHHHHHHHHHHHHHhhc---cCccEEEEeCCcccCCCccccceeecCCCcccCCCCCcEEeH
Confidence 431 1123568999999999999888764 5899999999999887543211 2469
Q ss_pred hhHHHHHHHHhhhcccccccceeeeCC
Q psy11190 218 GAATAGIIQFIQSLGEAHNGGFFEYTG 244 (248)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~g~~~~~~g 244 (248)
+++++.++..+..+ ...|+.+...+
T Consensus 195 ~Dva~ai~~~l~~~--~~~g~~~~~~~ 219 (227)
T 3dhn_A 195 EDYAAAMIDELEHP--KHHQERFTIGY 219 (227)
T ss_dssp HHHHHHHHHHHHSC--CCCSEEEEEEC
T ss_pred HHHHHHHHHHHhCc--cccCcEEEEEe
Confidence 99999999999873 34555555444
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.3e-21 Score=166.23 Aligned_cols=198 Identities=17% Similarity=0.101 Sum_probs=151.2
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
||++|||||+|+||++++++|+++| ++|++++|+.+. +. . ++.++.+|++|.++ +..+++.
T Consensus 12 ~~~vlVTGatG~iG~~l~~~L~~~G----~~V~~~~r~~~~-~~----l----~~~~~~~Dl~d~~~-~~~~~~~----- 72 (321)
T 2pk3_A 12 SMRALITGVAGFVGKYLANHLTEQN----VEVFGTSRNNEA-KL----P----NVEMISLDIMDSQR-VKKVISD----- 72 (321)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTT----CEEEEEESCTTC-CC----T----TEEEEECCTTCHHH-HHHHHHH-----
T ss_pred cceEEEECCCChHHHHHHHHHHHCC----CEEEEEecCCcc-cc----c----eeeEEECCCCCHHH-HHHHHHh-----
Confidence 5789999999999999999999999 899999998764 21 1 67889999999888 7776654
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+ ++|+|||+||.... ..+.++++..+++|+.++.++++++ +.+. +.++||++||.+.+.
T Consensus 73 ~--~~d~vih~A~~~~~-----~~~~~~~~~~~~~Nv~g~~~l~~a~-~~~~-------------~~~~iv~~SS~~v~g 131 (321)
T 2pk3_A 73 I--KPDYIFHLAAKSSV-----KDSWLNKKGTFSTNVFGTLHVLDAV-RDSN-------------LDCRILTIGSSEEYG 131 (321)
T ss_dssp H--CCSEEEECCSCCCH-----HHHTTCHHHHHHHHHHHHHHHHHHH-HHHT-------------CCCEEEEEEEGGGTB
T ss_pred c--CCCEEEEcCcccch-----hhhhhcHHHHHHHHHHHHHHHHHHH-HHhC-------------CCCeEEEEccHHhcC
Confidence 2 49999999997543 1234567888999999999999998 4441 357899999986543
Q ss_pred cc----------cCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC------------------
Q psy11190 161 ED----------NTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN------------------ 212 (248)
Q Consensus 161 ~~----------~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~------------------ 212 (248)
.. .+..+...|+.+|++.+.+++.++.++ |++++.+.||.+.+|.....
T Consensus 132 ~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~g~~ 208 (321)
T 2pk3_A 132 MILPEESPVSEENQLRPMSPYGVSKASVGMLARQYVKAY---GMDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQ 208 (321)
T ss_dssp SCCGGGCSBCTTSCCBCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHHTTSS
T ss_pred CCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHc---CCCEEEEEeCcccCcCCCCCchHHHHHHHHHHHhcCCC
Confidence 21 012346789999999999999998773 79999999999988764320
Q ss_pred -C------------CCchhhHHHHHHHHhhhcccccccceeeeCC
Q psy11190 213 -A------------PLEVGAATAGIIQFIQSLGEAHNGGFFEYTG 244 (248)
Q Consensus 213 -~------------~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g 244 (248)
. ...++++++.++.++... ..|..|...+
T Consensus 209 ~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~---~~g~~~~i~~ 250 (321)
T 2pk3_A 209 EPIIKVGNLEAVRDFTDVRDIVQAYWLLSQYG---KTGDVYNVCS 250 (321)
T ss_dssp CSEEEESCSSCEEEEEEHHHHHHHHHHHHHHC---CTTCEEEESC
T ss_pred CCeEEeCCCCcEEeeEEHHHHHHHHHHHHhCC---CCCCeEEeCC
Confidence 0 235888898888888764 3455565544
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=5.5e-22 Score=169.88 Aligned_cols=198 Identities=16% Similarity=0.082 Sum_probs=147.9
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHH--HHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAV--ELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|++|||||+|+||++++++|+++| ++|++++|+.+... .+.++ ....++.++.+|++|.++ +..+++.+
T Consensus 4 ~~vlVtGatG~iG~~l~~~L~~~G----~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~-~~~~~~~~--- 74 (345)
T 2z1m_A 4 KRALITGIRGQDGAYLAKLLLEKG----YEVYGADRRSGEFASWRLKEL-GIENDVKIIHMDLLEFSN-IIRTIEKV--- 74 (345)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT----CEEEEECSCCSTTTTHHHHHT-TCTTTEEECCCCTTCHHH-HHHHHHHH---
T ss_pred CEEEEECCCChHHHHHHHHHHHCC----CEEEEEECCCcccccccHhhc-cccCceeEEECCCCCHHH-HHHHHHhc---
Confidence 689999999999999999999999 99999999876532 22221 123468889999999888 77776655
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
++|+|||+||.... +.+.++++..+++|+.++.++++++.+. . ..++||++||.+.+
T Consensus 75 ----~~d~vih~A~~~~~-----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~--~------------~~~~iv~~SS~~vy 131 (345)
T 2z1m_A 75 ----QPDEVYNLAAQSFV-----GVSFEQPILTAEVDAIGVLRILEALRTV--K------------PDTKFYQASTSEMF 131 (345)
T ss_dssp ----CCSEEEECCCCCCH-----HHHTTSHHHHHHHHTHHHHHHHHHHHHH--C------------TTCEEEEEEEGGGG
T ss_pred ----CCCEEEECCCCcch-----hhhhhCHHHHHHHHHHHHHHHHHHHHHh--C------------CCceEEEEechhhc
Confidence 28999999997532 1234567888999999999999998753 1 13789999998643
Q ss_pred cc--------ccCCCCCccchhhHHHHHHHHHHHHhhcc---CCCeEEEEecCcceecCCC------------C-C----
Q psy11190 160 IE--------DNTQGGFHPYRCSKAALNAATRSLSIDLK---GDKIIATAMHPGWVKTDMG------------G-S---- 211 (248)
Q Consensus 160 ~~--------~~~~~~~~~y~~sK~a~~~~~~~la~e~~---~~~i~v~~v~PG~v~t~~~------------~-~---- 211 (248)
.. ..+..+...|+.+|++.+.+++.++.++. ..+++++.+.||...|.+. . .
T Consensus 132 g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (345)
T 2z1m_A 132 GKVQEIPQTEKTPFYPRSPYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLV 211 (345)
T ss_dssp CSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEE
T ss_pred CCCCCCCCCccCCCCCCChhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeee
Confidence 21 01224567899999999999999998875 3356778889997765431 0 0
Q ss_pred -------CCCCchhhHHHHHHHHhhhc
Q psy11190 212 -------NAPLEVGAATAGIIQFIQSL 231 (248)
Q Consensus 212 -------~~~~~~~~~~~~~~~~~~~~ 231 (248)
.....++++++.++.++...
T Consensus 212 ~~~~~~~~~~~~v~Dva~a~~~~~~~~ 238 (345)
T 2z1m_A 212 LGNLNAKRDWGYAPEYVEAMWLMMQQP 238 (345)
T ss_dssp ESCTTCEECCEEHHHHHHHHHHHHTSS
T ss_pred eCCCCceeeeEEHHHHHHHHHHHHhCC
Confidence 01456899999999988763
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.86 E-value=3.5e-21 Score=163.23 Aligned_cols=185 Identities=16% Similarity=0.095 Sum_probs=139.5
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
||++|||||+|+||++++++|+++| ..|++..++....+.+ ...+.++.+|+++ ++ +..+++
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~g----~~v~~~~~~~~~~~~~------~~~~~~~~~Dl~~-~~-~~~~~~------ 62 (313)
T 3ehe_A 1 MSLIVVTGGAGFIGSHVVDKLSESN----EIVVIDNLSSGNEEFV------NEAARLVKADLAA-DD-IKDYLK------ 62 (313)
T ss_dssp --CEEEETTTSHHHHHHHHHHTTTS----CEEEECCCSSCCGGGS------CTTEEEECCCTTT-SC-CHHHHT------
T ss_pred CCEEEEECCCchHHHHHHHHHHhCC----CEEEEEcCCCCChhhc------CCCcEEEECcCCh-HH-HHHHhc------
Confidence 8999999999999999999999998 7777776665443221 3468899999999 76 555432
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
++|+|||+|+.... ..+.++++..+++|+.++.++++.+.+ . +.++||++||...+.
T Consensus 63 ---~~d~vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~-----------~~~~iv~~SS~~vyg 119 (313)
T 3ehe_A 63 ---GAEEVWHIAANPDV-----RIGAENPDEIYRNNVLATYRLLEAMRK----A-----------GVSRIVFTSTSTVYG 119 (313)
T ss_dssp ---TCSEEEECCCCCCC-----C-CCCCHHHHHHHHHHHHHHHHHHHHH----H-----------TCCEEEEECCGGGGC
T ss_pred ---CCCEEEECCCCCCh-----hhhhhCHHHHHHHHHHHHHHHHHHHHH----c-----------CCCeEEEeCchHHhC
Confidence 39999999985432 345677888999999999999887543 2 457999999976542
Q ss_pred cc--------cCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC--------------------
Q psy11190 161 ED--------NTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN-------------------- 212 (248)
Q Consensus 161 ~~--------~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~-------------------- 212 (248)
.. .+..+...|+.+|.+.+.+++.++.++ |++++.+.|+.+..|.....
T Consensus 120 ~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (313)
T 3ehe_A 120 EAKVIPTPEDYPTHPISLYGASKLACEALIESYCHTF---DMQAWIYRFANVIGRRSTHGVIYDFIMKLKRNPEELEILG 196 (313)
T ss_dssp SCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHT---TCEEEEEECSCEESTTCCCSHHHHHHHHHHHCTTEEEEST
T ss_pred cCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhc---CCCEEEEeeccccCcCCCcChHHHHHHHHHcCCCceEEeC
Confidence 21 122446779999999999999999875 79999999999988753310
Q ss_pred ------CCCchhhHHHHHHHHhh
Q psy11190 213 ------APLEVGAATAGIIQFIQ 229 (248)
Q Consensus 213 ------~~~~~~~~~~~~~~~~~ 229 (248)
....++++++.++..+.
T Consensus 197 ~g~~~~~~i~v~Dva~a~~~~~~ 219 (313)
T 3ehe_A 197 NGEQNKSYIYISDCVDAMLFGLR 219 (313)
T ss_dssp TSCCEECCEEHHHHHHHHHHHTT
T ss_pred CCCeEEeEEEHHHHHHHHHHHhc
Confidence 12457889999988887
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=4.4e-22 Score=205.50 Aligned_cols=175 Identities=18% Similarity=0.142 Sum_probs=132.8
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHH---H-HHHHhhcCCceeEEeeccCCchhhhhHHHHhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVE---L-LALAQQHSNLHVIELDVTDFSKQQDVLFKDIS 77 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~---~-~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~ 77 (248)
|++|||||++|||+++|++|+++|+ .+|++++|+..+.+. . .++...+.++.++.+|++|.++ ++++++++.
T Consensus 1885 k~~lITGgs~GIG~aia~~la~~Ga---~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~-v~~~~~~~~ 1960 (2512)
T 2vz8_A 1885 KSYVITGGLGGFGLQLAQWLRLRGA---QKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDG-ARSLITEAT 1960 (2512)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTC---CEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHH-HHHHHHHHH
T ss_pred CEEEEECCCCCHHHHHHHHHHHCCC---CEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHH-HHHHHHHHH
Confidence 7899999999999999999999993 348889998765432 2 2333335578899999999999 999999987
Q ss_pred hhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCC
Q psy11190 78 DVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIM 157 (248)
Q Consensus 78 ~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~ 157 (248)
+ ++ ++|+||||||+... ..+.+++.++|++.+++|+.|++++.+.+.+.|.+ .++||++||.+
T Consensus 1961 ~-~g--~id~lVnnAgv~~~-~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~-------------~g~iV~iSS~a 2023 (2512)
T 2vz8_A 1961 Q-LG--PVGGVFNLAMVLRD-AVLENQTPEFFQDVSKPKYSGTANLDRVTREACPE-------------LDYFVIFSSVS 2023 (2512)
T ss_dssp H-HS--CEEEEEECCCC-----------------CTTTTHHHHHHHHHHHHHHCTT-------------CCEEEEECCHH
T ss_pred h-cC--CCcEEEECCCcCCC-CchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhccc-------------CCEEEEecchh
Confidence 4 55 69999999998765 77888999999999999999999999999988754 47999999999
Q ss_pred CcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcce
Q psy11190 158 GSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWV 204 (248)
Q Consensus 158 ~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v 204 (248)
+..+. +++..|+++|+++.+|++.++.+ |++..++..|.+
T Consensus 2024 g~~g~---~g~~~Y~aaKaal~~l~~~rr~~----Gl~~~a~~~g~~ 2063 (2512)
T 2vz8_A 2024 CGRGN---AGQANYGFANSAMERICEKRRHD----GLPGLAVQWGAI 2063 (2512)
T ss_dssp HHTTC---TTCHHHHHHHHHHHHHHHHHHHT----TSCCCEEEECCB
T ss_pred hcCCC---CCcHHHHHHHHHHHHHHHHHHHC----CCcEEEEEccCc
Confidence 98887 88899999999999999977654 566666666654
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=5.2e-21 Score=164.79 Aligned_cols=205 Identities=12% Similarity=0.068 Sum_probs=150.5
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchh----HHHHHHHHhh--cCCceeEEeeccCCchhhhhHHH
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDK----AVELLALAQQ--HSNLHVIELDVTDFSKQQDVLFK 74 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~----~~~~~~~~~~--~~~~~~~~~D~~~~~~~v~~~~~ 74 (248)
||++|||||+|+||++++++|+++| +.|++++|+... +..+.+.... ..++.++.+|++|.++ +..+++
T Consensus 27 ~~~vlVtGatG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~-~~~~~~ 101 (352)
T 1sb8_A 27 PKVWLITGVAGFIGSNLLETLLKLD----QKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDD-CNNACA 101 (352)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT----CEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHH-HHHHHT
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCC----CEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHH-HHHHhc
Confidence 5789999999999999999999999 899999997642 2222221111 3578899999999877 555533
Q ss_pred HhhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEee
Q psy11190 75 DISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVS 154 (248)
Q Consensus 75 ~i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vs 154 (248)
++|+|||+||.... . .+.++++..+++|+.++.++++++.+. +.++||++|
T Consensus 102 ---------~~d~vih~A~~~~~-~----~~~~~~~~~~~~n~~~~~~l~~a~~~~---------------~~~~~v~~S 152 (352)
T 1sb8_A 102 ---------GVDYVLHQAALGSV-P----RSINDPITSNATNIDGFLNMLIAARDA---------------KVQSFTYAA 152 (352)
T ss_dssp ---------TCSEEEECCSCCCH-H----HHHHCHHHHHHHHTHHHHHHHHHHHHT---------------TCSEEEEEE
T ss_pred ---------CCCEEEECCcccCc-h----hhhhCHHHHHHHHHHHHHHHHHHHHHc---------------CCCEEEEec
Confidence 39999999997542 1 134667888999999999999987653 457899999
Q ss_pred cCCCcccccC--------CCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC--------------
Q psy11190 155 SIMGSIEDNT--------QGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN-------------- 212 (248)
Q Consensus 155 s~~~~~~~~~--------~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~-------------- 212 (248)
|...+..... ..+...|+.+|.+.+.+++.++.++ |++++.+.||.+.++.....
T Consensus 153 S~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~ 229 (352)
T 1sb8_A 153 SSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCY---GFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSM 229 (352)
T ss_dssp EGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHH
T ss_pred cHHhcCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEEECceeCcCCCCCcchhhHHHHHHHHH
Confidence 9876543210 0235689999999999999998775 79999999999998864321
Q ss_pred ----------------CCCchhhHHHHHHHHhhhcccccccceeeeC
Q psy11190 213 ----------------APLEVGAATAGIIQFIQSLGEAHNGGFFEYT 243 (248)
Q Consensus 213 ----------------~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 243 (248)
....++++++.++..+... ....+..|...
T Consensus 230 ~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~-~~~~~~~~ni~ 275 (352)
T 1sb8_A 230 IQGDDVYINGDGETSRDFCYIENTVQANLLAATAG-LDARNQVYNIA 275 (352)
T ss_dssp HHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCC-GGGCSEEEEES
T ss_pred HCCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhcc-ccCCCceEEeC
Confidence 0235778888888777652 22345555543
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.86 E-value=2.8e-21 Score=165.53 Aligned_cols=196 Identities=15% Similarity=0.184 Sum_probs=142.0
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
+++|||||+|+||++++++|+++| ++|++++|+.++.+.+. ..++.++.+|++|.++ +..+++
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~l~-----~~~~~~~~~Dl~d~~~-~~~~~~------- 76 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAAG----HDLVLIHRPSSQIQRLA-----YLEPECRVAEMLDHAG-LERALR------- 76 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT----CEEEEEECTTSCGGGGG-----GGCCEEEECCTTCHHH-HHHHTT-------
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC----CEEEEEecChHhhhhhc-----cCCeEEEEecCCCHHH-HHHHHc-------
Confidence 479999999999999999999999 99999999877643321 2368899999999877 554432
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+|||+||.... +.++++..+++|+.++.++++++.+. +.+++|++||...+..
T Consensus 77 --~~d~vih~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~a~~~~---------------~~~~~v~~SS~~~~~~ 132 (342)
T 2x4g_A 77 --GLDGVIFSAGYYPS-------RPRRWQEEVASALGQTNPFYAACLQA---------------RVPRILYVGSAYAMPR 132 (342)
T ss_dssp --TCSEEEEC-------------------CHHHHHHHHHHHHHHHHHHH---------------TCSCEEEECCGGGSCC
T ss_pred --CCCEEEECCccCcC-------CCCCHHHHHHHHHHHHHHHHHHHHHc---------------CCCeEEEECCHHhhCc
Confidence 39999999996431 34567788899999999999988764 3578999999876543
Q ss_pred ccC---------CCC----CccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCC-CC------------CC--
Q psy11190 162 DNT---------QGG----FHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMG-GS------------NA-- 213 (248)
Q Consensus 162 ~~~---------~~~----~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~-~~------------~~-- 213 (248)
... ..+ ...|+.+|.+.+.+++.++. . |++++.+.||.+.++.. +. ..
T Consensus 133 ~~~~~~~~E~~~~~p~~~~~~~Y~~sK~~~e~~~~~~~~---~-g~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~ 208 (342)
T 2x4g_A 133 HPQGLPGHEGLFYDSLPSGKSSYVLCKWALDEQAREQAR---N-GLPVVIGIPGMVLGELDIGPTTGRVITAIGNGEMTH 208 (342)
T ss_dssp CTTSSCBCTTCCCSSCCTTSCHHHHHHHHHHHHHHHHHH---T-TCCEEEEEECEEECSCCSSCSTTHHHHHHHTTCCCE
T ss_pred CCCCCCCCCCCCCCccccccChHHHHHHHHHHHHHHHhh---c-CCcEEEEeCCceECCCCccccHHHHHHHHHcCCCcc
Confidence 211 011 56899999999999999885 3 79999999999998865 20 00
Q ss_pred -------CCchhhHHHHHHHHhhhcccccccceeeeCCe
Q psy11190 214 -------PLEVGAATAGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 214 -------~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
...++++++.++..+..... |+.|...+.
T Consensus 209 ~~~~~~~~i~v~Dva~~~~~~~~~~~~---g~~~~v~~~ 244 (342)
T 2x4g_A 209 YVAGQRNVIDAAEAGRGLLMALERGRI---GERYLLTGH 244 (342)
T ss_dssp EECCEEEEEEHHHHHHHHHHHHHHSCT---TCEEEECCE
T ss_pred ccCCCcceeeHHHHHHHHHHHHhCCCC---CceEEEcCC
Confidence 23688999999988876432 556665543
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=2.7e-21 Score=166.02 Aligned_cols=201 Identities=13% Similarity=0.088 Sum_probs=148.5
Q ss_pred CceEEEecCCCchhHHHHHHHHhC--CCCCCceEEEeecCchh--HHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGL--GNNQPAHIFATCRNKDK--AVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDI 76 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~--g~~~~~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i 76 (248)
||++|||||+|+||++++++|+++ | ++|++++|+... .+.+.++ ...++.++.+|++|.++ +..++
T Consensus 4 m~~vlVTGatG~iG~~l~~~L~~~~~g----~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~-~~~~~--- 73 (348)
T 1oc2_A 4 FKNIIVTGGAGFIGSNFVHYVYNNHPD----VHVTVLDKLTYAGNKANLEAI--LGDRVELVVGDIADAEL-VDKLA--- 73 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTT----CEEEEEECCCTTCCGGGTGGG--CSSSEEEEECCTTCHHH-HHHHH---
T ss_pred CcEEEEeCCccHHHHHHHHHHHHhCCC----CEEEEEeCCCCCCChhHHhhh--ccCCeEEEECCCCCHHH-HHHHh---
Confidence 689999999999999999999999 6 899999997531 1111111 12578899999999777 54442
Q ss_pred hhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecC
Q psy11190 77 SDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSI 156 (248)
Q Consensus 77 ~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~ 156 (248)
. ++|+|||+||.... +.+.++++..+++|+.++.++++++.+. + ++||++||.
T Consensus 74 ----~--~~d~vih~A~~~~~-----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~---------------~-~~~v~~SS~ 126 (348)
T 1oc2_A 74 ----A--KADAIVHYAAESHN-----DNSLNDPSPFIHTNFIGTYTLLEAARKY---------------D-IRFHHVSTD 126 (348)
T ss_dssp ----T--TCSEEEECCSCCCH-----HHHHHCCHHHHHHHTHHHHHHHHHHHHH---------------T-CEEEEEEEG
T ss_pred ----h--cCCEEEECCcccCc-----cchhhCHHHHHHHHHHHHHHHHHHHHHh---------------C-CeEEEeccc
Confidence 2 37999999997532 1234567788899999999999998764 2 389999997
Q ss_pred CCcccc--------------------cCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC----
Q psy11190 157 MGSIED--------------------NTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN---- 212 (248)
Q Consensus 157 ~~~~~~--------------------~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~---- 212 (248)
..+... .+..+...|+.+|.+.+.+++.++.++ |++++.+.||.+.++.....
T Consensus 127 ~vyg~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilrp~~v~G~~~~~~~~~~ 203 (348)
T 1oc2_A 127 EVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF---GVKATISNCSNNYGPYQHIEKFIP 203 (348)
T ss_dssp GGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEESTTCCTTSHHH
T ss_pred ceeCCCcccccccccccccCCCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEeeceeeCCCCCccchHH
Confidence 643211 022355689999999999999998775 79999999999998875321
Q ss_pred ----------------------CCCchhhHHHHHHHHhhhcccccccceeeeCC
Q psy11190 213 ----------------------APLEVGAATAGIIQFIQSLGEAHNGGFFEYTG 244 (248)
Q Consensus 213 ----------------------~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g 244 (248)
....++++++.++.++... .+|+.|...+
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~---~~g~~~~i~~ 254 (348)
T 1oc2_A 204 RQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILTKG---RMGETYLIGA 254 (348)
T ss_dssp HHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHHHHHHC---CTTCEEEECC
T ss_pred HHHHHHHcCCCceEecCCCceEeeEEHHHHHHHHHHHhhCC---CCCCeEEeCC
Confidence 0235889999999888653 3566666554
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.85 E-value=4.5e-21 Score=163.92 Aligned_cols=205 Identities=14% Similarity=0.062 Sum_probs=150.7
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCch--hHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKD--KAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
+++|||||+|+||++++++|+++| .+++|++++|+.. ..+.+.++ ....++.++.+|++|.++ +..++
T Consensus 4 m~vlVTGatG~iG~~l~~~L~~~g--~~~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~-~~~~~------ 73 (336)
T 2hun_A 4 MKLLVTGGMGFIGSNFIRYILEKH--PDWEVINIDKLGYGSNPANLKDL-EDDPRYTFVKGDVADYEL-VKELV------ 73 (336)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHC--TTCEEEEEECCCTTCCGGGGTTT-TTCTTEEEEECCTTCHHH-HHHHH------
T ss_pred CeEEEECCCchHHHHHHHHHHHhC--CCCEEEEEecCcccCchhHHhhh-ccCCceEEEEcCCCCHHH-HHHHh------
Confidence 469999999999999999999986 2278999998642 22222111 113578899999999877 66554
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
+ ++|+|||+||.... +.+.++++..+++|+.++.++++++.+. . ..++||++||...+
T Consensus 74 -~--~~d~vih~A~~~~~-----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~--~------------~~~~iv~~SS~~vy 131 (336)
T 2hun_A 74 -R--KVDGVVHLAAESHV-----DRSISSPEIFLHSNVIGTYTLLESIRRE--N------------PEVRFVHVSTDEVY 131 (336)
T ss_dssp -H--TCSEEEECCCCCCH-----HHHHHCTHHHHHHHHHHHHHHHHHHHHH--C------------TTSEEEEEEEGGGG
T ss_pred -h--CCCEEEECCCCcCh-----hhhhhCHHHHHHHHHHHHHHHHHHHHHh--C------------CCcEEEEeccHHHH
Confidence 2 49999999997532 1234567788999999999999998875 1 24789999997643
Q ss_pred ccc--------cCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC------------------
Q psy11190 160 IED--------NTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA------------------ 213 (248)
Q Consensus 160 ~~~--------~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~------------------ 213 (248)
... .+..+...|+.+|++.+.+++.++.++ |++++.+.||.+.++......
T Consensus 132 g~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (336)
T 2hun_A 132 GDILKGSFTENDRLMPSSPYSATKAASDMLVLGWTRTY---NLNASITRCTNNYGPYQFPEKLIPKTIIRASLGLKIPIY 208 (336)
T ss_dssp CCCSSSCBCTTBCCCCCSHHHHHHHHHHHHHHHHHHHT---TCEEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCEEEE
T ss_pred CCCCCCCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEeeeeeeCcCCCcCchHHHHHHHHHcCCCceEe
Confidence 211 022456789999999999999999874 799999999999998753210
Q ss_pred --------CCchhhHHHHHHHHhhhcccccccceeeeCC
Q psy11190 214 --------PLEVGAATAGIIQFIQSLGEAHNGGFFEYTG 244 (248)
Q Consensus 214 --------~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g 244 (248)
...++++++.++.++... .+|+.|...+
T Consensus 209 ~~~~~~~~~i~v~Dva~~~~~~~~~~---~~g~~~~v~~ 244 (336)
T 2hun_A 209 GTGKNVRDWLYVEDHVRAIELVLLKG---ESREIYNISA 244 (336)
T ss_dssp TC---CEEEEEHHHHHHHHHHHHHHC---CTTCEEEECC
T ss_pred CCCCceeeeEEHHHHHHHHHHHHhCC---CCCCEEEeCC
Confidence 134789999998888652 3566666554
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=99.85 E-value=5.1e-22 Score=164.85 Aligned_cols=182 Identities=15% Similarity=0.075 Sum_probs=140.2
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
||++|||||+|+||++++++|+++| ++|++++|+.++.. ..++.++.+|++|.++ +..+++
T Consensus 2 ~~~ilVtGatG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~--------~~~~~~~~~Dl~d~~~-~~~~~~------ 62 (267)
T 3ay3_A 2 LNRLLVTGAAGGVGSAIRPHLGTLA----HEVRLSDIVDLGAA--------EAHEEIVACDLADAQA-VHDLVK------ 62 (267)
T ss_dssp EEEEEEESTTSHHHHHHGGGGGGTE----EEEEECCSSCCCCC--------CTTEEECCCCTTCHHH-HHHHHT------
T ss_pred CceEEEECCCCHHHHHHHHHHHhCC----CEEEEEeCCCcccc--------CCCccEEEccCCCHHH-HHHHHc------
Confidence 5789999999999999999999999 99999999875421 1357889999999877 555432
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
++|+|||+||.. +.+.++..+++|+.++.++++.+.+. +.++||++||.....
T Consensus 63 ---~~d~vi~~a~~~---------~~~~~~~~~~~n~~~~~~l~~a~~~~---------------~~~~iv~~SS~~~~~ 115 (267)
T 3ay3_A 63 ---DCDGIIHLGGVS---------VERPWNDILQANIIGAYNLYEAARNL---------------GKPRIVFASSNHTIG 115 (267)
T ss_dssp ---TCSEEEECCSCC---------SCCCHHHHHHHTHHHHHHHHHHHHHT---------------TCCEEEEEEEGGGST
T ss_pred ---CCCEEEECCcCC---------CCCCHHHHHHHHHHHHHHHHHHHHHh---------------CCCEEEEeCCHHHhC
Confidence 399999999864 12456788889999999999887642 457899999987653
Q ss_pred ccc---------CCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcce-ecCCCCC--CCCCchhhHHHHHHHHh
Q psy11190 161 EDN---------TQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWV-KTDMGGS--NAPLEVGAATAGIIQFI 228 (248)
Q Consensus 161 ~~~---------~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v-~t~~~~~--~~~~~~~~~~~~~~~~~ 228 (248)
..+ +..+...|+.+|++++.+++.++. .+|++++.+.||++ .++.... .....++++++.++..+
T Consensus 116 ~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~---~~gi~~~~lrp~~v~~~~~~~~~~~~~~~~~dva~~~~~~~ 192 (267)
T 3ay3_A 116 YYPRTTRIDTEVPRRPDSLYGLSKCFGEDLASLYYH---KFDIETLNIRIGSCFPKPKDARMMATWLSVDDFMRLMKRAF 192 (267)
T ss_dssp TSBTTSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHH---TTCCCEEEEEECBCSSSCCSHHHHHHBCCHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHH---HcCCCEEEEeceeecCCCCCCCeeeccccHHHHHHHHHHHH
Confidence 321 011356899999999999998864 45899999999998 4443211 12467899999999988
Q ss_pred hhc
Q psy11190 229 QSL 231 (248)
Q Consensus 229 ~~~ 231 (248)
...
T Consensus 193 ~~~ 195 (267)
T 3ay3_A 193 VAP 195 (267)
T ss_dssp HSS
T ss_pred hCC
Confidence 764
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.8e-20 Score=152.88 Aligned_cols=184 Identities=14% Similarity=0.082 Sum_probs=125.8
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
||++|||||+|+||++++++|+++|. ++|++++|+.+++.++ ...++.++++|++|.++ ++.+++
T Consensus 23 mk~vlVtGatG~iG~~l~~~L~~~G~---~~V~~~~R~~~~~~~~-----~~~~~~~~~~Dl~d~~~-~~~~~~------ 87 (236)
T 3qvo_A 23 MKNVLILGAGGQIARHVINQLADKQT---IKQTLFARQPAKIHKP-----YPTNSQIIMGDVLNHAA-LKQAMQ------ 87 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTT---EEEEEEESSGGGSCSS-----CCTTEEEEECCTTCHHH-HHHHHT------
T ss_pred ccEEEEEeCCcHHHHHHHHHHHhCCC---ceEEEEEcChhhhccc-----ccCCcEEEEecCCCHHH-HHHHhc------
Confidence 68999999999999999999999883 6999999998764432 13478899999999887 655532
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
++|+||||+|... ....++.+++.++++ +.++||++||..+..
T Consensus 88 ---~~D~vv~~a~~~~-----------------------~~~~~~~~~~~~~~~-----------~~~~iV~iSS~~~~~ 130 (236)
T 3qvo_A 88 ---GQDIVYANLTGED-----------------------LDIQANSVIAAMKAC-----------DVKRLIFVLSLGIYD 130 (236)
T ss_dssp ---TCSEEEEECCSTT-----------------------HHHHHHHHHHHHHHT-----------TCCEEEEECCCCC--
T ss_pred ---CCCEEEEcCCCCc-----------------------hhHHHHHHHHHHHHc-----------CCCEEEEEecceecC
Confidence 3899999998521 113466788888775 568999999988765
Q ss_pred cccCCCC------CccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC-----------CCCchhhHHHH
Q psy11190 161 EDNTQGG------FHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN-----------APLEVGAATAG 223 (248)
Q Consensus 161 ~~~~~~~------~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~-----------~~~~~~~~~~~ 223 (248)
+.+.... ...+...+... ...+.+.|+++++|.||++.++..... ....++++++.
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~-------~~~l~~~gi~~~~vrPg~i~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~ 203 (236)
T 3qvo_A 131 EVPGKFVEWNNAVIGEPLKPFRRA-------ADAIEASGLEYTILRPAWLTDEDIIDYELTSRNEPFKGTIVSRKSVAAL 203 (236)
T ss_dssp --------------CGGGHHHHHH-------HHHHHTSCSEEEEEEECEEECCSCCCCEEECTTSCCSCSEEEHHHHHHH
T ss_pred CCCcccccchhhcccchHHHHHHH-------HHHHHHCCCCEEEEeCCcccCCCCcceEEeccCCCCCCcEECHHHHHHH
Confidence 4311000 01111222221 122346799999999999998754321 12579999999
Q ss_pred HHHHhhhcccccccceeeeCC
Q psy11190 224 IIQFIQSLGEAHNGGFFEYTG 244 (248)
Q Consensus 224 ~~~~~~~~~~~~~g~~~~~~g 244 (248)
++.+++++.... ++.+...+
T Consensus 204 i~~ll~~~~~~~-g~~~~i~~ 223 (236)
T 3qvo_A 204 ITDIIDKPEKHI-GENIGINQ 223 (236)
T ss_dssp HHHHHHSTTTTT-TEEEEEEC
T ss_pred HHHHHcCccccc-CeeEEecC
Confidence 999998866444 55554443
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=2.8e-20 Score=162.82 Aligned_cols=177 Identities=12% Similarity=0.039 Sum_probs=133.3
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHH-----------------HHHHHH-hhcCCceeEEeec
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAV-----------------ELLALA-QQHSNLHVIELDV 62 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~-----------------~~~~~~-~~~~~~~~~~~D~ 62 (248)
|+++|||||+|.||++++++|+++| ++|++++|+..... .+.+.. ....++.++.+|+
T Consensus 11 ~~~vlVTG~tGfIG~~l~~~L~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl 86 (404)
T 1i24_A 11 GSRVMVIGGDGYCGWATALHLSKKN----YEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDI 86 (404)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTT----CEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCT
T ss_pred CCeEEEeCCCcHHHHHHHHHHHhCC----CeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCC
Confidence 5689999999999999999999999 89999998654321 122211 1245788999999
Q ss_pred cCCchhhhhHHHHhhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCC
Q psy11190 63 TDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAP 142 (248)
Q Consensus 63 ~~~~~~v~~~~~~i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~ 142 (248)
+|.++ +..+++.. ++|+|||+||.... ... ..++++++..+++|+.++.++++++.+.
T Consensus 87 ~d~~~-~~~~~~~~-------~~D~Vih~A~~~~~-~~~-~~~~~~~~~~~~~Nv~gt~~ll~a~~~~------------ 144 (404)
T 1i24_A 87 CDFEF-LAESFKSF-------EPDSVVHFGEQRSA-PYS-MIDRSRAVYTQHNNVIGTLNVLFAIKEF------------ 144 (404)
T ss_dssp TSHHH-HHHHHHHH-------CCSEEEECCSCCCH-HHH-TSCHHHHHHHHHHHHHHHHHHHHHHHHH------------
T ss_pred CCHHH-HHHHHhcc-------CCCEEEECCCCCCc-cch-hhCccchhhhHHHHHHHHHHHHHHHHHh------------
Confidence 99888 77766554 29999999997643 211 2256667788999999999999887653
Q ss_pred CCCCC-ceEEEeecCCCcccc---------------------cCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEec
Q psy11190 143 LGSSR-AAIVNVSSIMGSIED---------------------NTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMH 200 (248)
Q Consensus 143 ~~~~~-~~iv~vss~~~~~~~---------------------~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~ 200 (248)
+. .+||++||.+.+... .+..+...|+.+|.+.+.+++.++.++ |++++++.
T Consensus 145 ---~~~~~~V~~SS~~vyg~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ivr 218 (404)
T 1i24_A 145 ---GEECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLN 218 (404)
T ss_dssp ---CTTCEEEEECCGGGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEE
T ss_pred ---CCCcEEEEeCcHHHhCCCCCCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhc---CCeEEEEe
Confidence 23 489999997543211 022345679999999999999998775 79999999
Q ss_pred CcceecCCC
Q psy11190 201 PGWVKTDMG 209 (248)
Q Consensus 201 PG~v~t~~~ 209 (248)
||.+.+|..
T Consensus 219 p~~v~Gp~~ 227 (404)
T 1i24_A 219 QGVVYGVKT 227 (404)
T ss_dssp ECEEECSCC
T ss_pred cceeeCCCC
Confidence 999998854
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=1.2e-20 Score=159.70 Aligned_cols=197 Identities=17% Similarity=0.087 Sum_probs=146.6
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhcC
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVKD 82 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~~ 82 (248)
++|||||+|+||++++++|+++| ++|++++|+.+...+. ....+.++.+|++|.+ +. +.+.
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~-----~~~~~~~~~~Dl~d~~--~~-------~~~~- 62 (312)
T 3ko8_A 2 RIVVTGGAGFIGSHLVDKLVELG----YEVVVVDNLSSGRREF-----VNPSAELHVRDLKDYS--WG-------AGIK- 62 (312)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT----CEEEEECCCSSCCGGG-----SCTTSEEECCCTTSTT--TT-------TTCC-
T ss_pred EEEEECCCChHHHHHHHHHHhCC----CEEEEEeCCCCCchhh-----cCCCceEEECccccHH--HH-------hhcC-
Confidence 69999999999999999999999 9999999987653321 1457889999998865 22 2222
Q ss_pred CCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcccc
Q psy11190 83 QGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIED 162 (248)
Q Consensus 83 ~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~~ 162 (248)
. |+|||+|+.... ..+.++++..+++|+.++.++++++... +.++||++||...+...
T Consensus 63 -~-d~vih~A~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~a~~~~---------------~~~~iv~~SS~~vyg~~ 120 (312)
T 3ko8_A 63 -G-DVVFHFAANPEV-----RLSTTEPIVHFNENVVATFNVLEWARQT---------------GVRTVVFASSSTVYGDA 120 (312)
T ss_dssp -C-SEEEECCSSCSS-----SGGGSCHHHHHHHHHHHHHHHHHHHHHH---------------TCCEEEEEEEGGGGCSC
T ss_pred -C-CEEEECCCCCCc-----hhhhhCHHHHHHHHHHHHHHHHHHHHHc---------------CCCEEEEeCcHHHhCCC
Confidence 2 999999996432 3355677888999999999999887432 45689999997754321
Q ss_pred --------cCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC-------------C--------
Q psy11190 163 --------NTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN-------------A-------- 213 (248)
Q Consensus 163 --------~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~-------------~-------- 213 (248)
.+..+...|+.+|.+.+.+++.++.++ |++++.+.||.+.+|..... .
T Consensus 121 ~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---g~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g 197 (312)
T 3ko8_A 121 DVIPTPEEEPYKPISVYGAAKAAGEVMCATYARLF---GVRCLAVRYANVVGPRLRHGVIYDFIMKLRRNPNVLEVLGDG 197 (312)
T ss_dssp SSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCSSHHHHHHHHHHHCTTEEEEC---
T ss_pred CCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCCEEEEeeccccCcCCCCChHHHHHHHHHhCCCCeEEcCCC
Confidence 112346789999999999999999886 79999999999999864321 0
Q ss_pred -----CCchhhHHHHHHHHhhhcc-cccccceeeeC
Q psy11190 214 -----PLEVGAATAGIIQFIQSLG-EAHNGGFFEYT 243 (248)
Q Consensus 214 -----~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~ 243 (248)
...++++++.++..+.... ....+..|...
T Consensus 198 ~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~ni~ 233 (312)
T 3ko8_A 198 TQRKSYLYVRDAVEATLAAWKKFEEMDAPFLALNVG 233 (312)
T ss_dssp -CEECEEEHHHHHHHHHHHHHHHHHSCCSEEEEEES
T ss_pred CeEEeeEEHHHHHHHHHHHHHhccccCCCCcEEEEc
Confidence 1348899999998887622 23345555443
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=3e-20 Score=159.82 Aligned_cols=204 Identities=13% Similarity=0.066 Sum_probs=149.5
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH-HHHHhh-----cCCceeEEeeccCCchhhhhHHH
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL-LALAQQ-----HSNLHVIELDVTDFSKQQDVLFK 74 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~-~~~~~~-----~~~~~~~~~D~~~~~~~v~~~~~ 74 (248)
||++|||||+|+||++++++|+++| ++|++++|+....... ..+... ..++.++.+|++|.++ +..+++
T Consensus 25 ~~~vlVtGatG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~-~~~~~~ 99 (351)
T 3ruf_A 25 PKTWLITGVAGFIGSNLLEKLLKLN----QVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTT-CEQVMK 99 (351)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT----CEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHH-HHHHTT
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCC----CEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHH-HHHHhc
Confidence 4789999999999999999999999 9999999976543333 222211 1688999999999877 555433
Q ss_pred HhhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEee
Q psy11190 75 DISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVS 154 (248)
Q Consensus 75 ~i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vs 154 (248)
++|+|||+||.... ..+.++....+++|+.++.++++++.+. +..++|++|
T Consensus 100 ---------~~d~Vih~A~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~~~---------------~~~~~v~~S 150 (351)
T 3ruf_A 100 ---------GVDHVLHQAALGSV-----PRSIVDPITTNATNITGFLNILHAAKNA---------------QVQSFTYAA 150 (351)
T ss_dssp ---------TCSEEEECCCCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHHT---------------TCSEEEEEE
T ss_pred ---------CCCEEEECCccCCc-----chhhhCHHHHHHHHHHHHHHHHHHHHHc---------------CCCEEEEEe
Confidence 39999999997533 1234566778899999999998887543 346899999
Q ss_pred cCCCcccccC--------CCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC--------------
Q psy11190 155 SIMGSIEDNT--------QGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN-------------- 212 (248)
Q Consensus 155 s~~~~~~~~~--------~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~-------------- 212 (248)
|...+..... ..+...|+.+|.+.+.+++.++.+. |++++.+.|+.+..|.....
T Consensus 151 S~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~ 227 (351)
T 3ruf_A 151 SSSTYGDHPALPKVEENIGNPLSPYAVTKYVNEIYAQVYARTY---GFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAM 227 (351)
T ss_dssp EGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHH
T ss_pred cHHhcCCCCCCCCccCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHH
Confidence 9865433211 1234679999999999999998774 79999999999988754322
Q ss_pred ----------------CCCchhhHHHHHHHHhhhcccccccceeee
Q psy11190 213 ----------------APLEVGAATAGIIQFIQSLGEAHNGGFFEY 242 (248)
Q Consensus 213 ----------------~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 242 (248)
....++++++.++..+.... ...+..|..
T Consensus 228 ~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~-~~~~~~~ni 272 (351)
T 3ruf_A 228 LKGDDVYINGDGETSRDFCYIDNVIQMNILSALAKD-SAKDNIYNV 272 (351)
T ss_dssp HHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCG-GGCSEEEEE
T ss_pred HcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhhcc-ccCCCEEEe
Confidence 02347889999888876632 334455544
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=99.84 E-value=5.7e-20 Score=148.29 Aligned_cols=188 Identities=10% Similarity=0.107 Sum_probs=132.5
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|| +|||||+|+||++++++|+++| ++|++++|+.+++.++ ...++.++++|++|.++ +.+
T Consensus 1 Mk-ilVtGatG~iG~~l~~~L~~~g----~~V~~~~R~~~~~~~~-----~~~~~~~~~~D~~d~~~----------~~~ 60 (224)
T 3h2s_A 1 MK-IAVLGATGRAGSAIVAEARRRG----HEVLAVVRDPQKAADR-----LGATVATLVKEPLVLTE----------ADL 60 (224)
T ss_dssp CE-EEEETTTSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHH-----TCTTSEEEECCGGGCCH----------HHH
T ss_pred CE-EEEEcCCCHHHHHHHHHHHHCC----CEEEEEEecccccccc-----cCCCceEEecccccccH----------hhc
Confidence 65 9999999999999999999999 9999999998765543 23578999999998764 222
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
. ++|+|||+||.... .+ ...+|+.++ +.+++.+++. + +++|++||..+..
T Consensus 61 ~--~~d~vi~~ag~~~~--------~~----~~~~n~~~~----~~l~~a~~~~-----------~-~~~v~~SS~~~~~ 110 (224)
T 3h2s_A 61 D--SVDAVVDALSVPWG--------SG----RGYLHLDFA----THLVSLLRNS-----------D-TLAVFILGSASLA 110 (224)
T ss_dssp T--TCSEEEECCCCCTT--------SS----CTHHHHHHH----HHHHHTCTTC-----------C-CEEEEECCGGGSB
T ss_pred c--cCCEEEECCccCCC--------cc----hhhHHHHHH----HHHHHHHHHc-----------C-CcEEEEecceeec
Confidence 2 49999999997521 00 122355454 5555555553 4 8999999987655
Q ss_pred cccCC---------C--CCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC---------------CCC
Q psy11190 161 EDNTQ---------G--GFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS---------------NAP 214 (248)
Q Consensus 161 ~~~~~---------~--~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~---------------~~~ 214 (248)
..... . +...|+.+|.+.+.+. .+. ...+++++.+.||++.++.... ...
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~-~~~---~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~ 186 (224)
T 3h2s_A 111 MPGADHPMILDFPESAASQPWYDGALYQYYEYQ-FLQ---MNANVNWIGISPSEAFPSGPATSYVAGKDTLLVGEDGQSH 186 (224)
T ss_dssp CTTCSSCGGGGCCGGGGGSTTHHHHHHHHHHHH-HHT---TCTTSCEEEEEECSBCCCCCCCCEEEESSBCCCCTTSCCB
T ss_pred cCCCCccccccCCCCCccchhhHHHHHHHHHHH-HHH---hcCCCcEEEEcCccccCCCcccCceecccccccCCCCCce
Confidence 43110 0 1568999999988542 222 3568999999999998773211 114
Q ss_pred CchhhHHHHHHHHhhhcccccccceeeeCC
Q psy11190 215 LEVGAATAGIIQFIQSLGEAHNGGFFEYTG 244 (248)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g 244 (248)
..++++++.++..+..+ ...|+.|..-+
T Consensus 187 i~~~DvA~~~~~~l~~~--~~~g~~~~~~~ 214 (224)
T 3h2s_A 187 ITTGNMALAILDQLEHP--TAIRDRIVVRD 214 (224)
T ss_dssp CCHHHHHHHHHHHHHSC--CCTTSEEEEEE
T ss_pred EeHHHHHHHHHHHhcCc--cccCCEEEEec
Confidence 67999999999999874 33455554433
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=7.4e-20 Score=156.58 Aligned_cols=193 Identities=16% Similarity=0.115 Sum_probs=139.5
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhh---cCCceeEEeeccCCchhhhhHHHHhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQ---HSNLHVIELDVTDFSKQQDVLFKDIS 77 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~v~~~~~~i~ 77 (248)
||++|||||+|+||++++++|+++| ++|+++.|+.+.......+... ..++.++++|++|.++ +..+++
T Consensus 5 ~~~vlVTGatGfIG~~l~~~L~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~-~~~~~~--- 76 (337)
T 2c29_D 5 SETVCVTGASGFIGSWLVMRLLERG----YTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGS-FDEAIK--- 76 (337)
T ss_dssp -CEEEETTTTSHHHHHHHHHHHHTT----CEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTT-THHHHT---
T ss_pred CCEEEEECCchHHHHHHHHHHHHCC----CEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHH-HHHHHc---
Confidence 4789999999999999999999999 8999999987754433322111 1257789999999887 555432
Q ss_pred hhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCC
Q psy11190 78 DVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIM 157 (248)
Q Consensus 78 ~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~ 157 (248)
++|+|||+|+... +. ..+..+..+++|+.++.++++++.+.. ..++||++||.+
T Consensus 77 ------~~d~Vih~A~~~~----~~--~~~~~~~~~~~nv~gt~~ll~a~~~~~--------------~~~riV~~SS~~ 130 (337)
T 2c29_D 77 ------GCTGVFHVATPMD----FE--SKDPENEVIKPTIEGMLGIMKSCAAAK--------------TVRRLVFTSSAG 130 (337)
T ss_dssp ------TCSEEEECCCCCC----SS--CSSHHHHTHHHHHHHHHHHHHHHHHHS--------------CCCEEEEECCGG
T ss_pred ------CCCEEEEeccccC----CC--CCChHHHHHHHHHHHHHHHHHHHHhCC--------------CccEEEEeeeHh
Confidence 3899999998531 11 122335688899999999999887641 147899999987
Q ss_pred CcccccCC-------------------CCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC-----
Q psy11190 158 GSIEDNTQ-------------------GGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA----- 213 (248)
Q Consensus 158 ~~~~~~~~-------------------~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~----- 213 (248)
+..+.... ++...|+.+|.+.+.+++.++.+ +|++++++.|+.+.+|......
T Consensus 131 ~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~~lrp~~v~Gp~~~~~~~~~~~ 207 (337)
T 2c29_D 131 TVNIQEHQLPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKE---NNIDFITIIPTLVVGPFIMSSMPPSLI 207 (337)
T ss_dssp GTSCSSSCCSEECTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHH---HTCCEEEEEECEEESCCSCSSCCHHHH
T ss_pred hcccCCCCCcccCcccCCchhhhcccCCccchHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCceECCCCCCCCCchHH
Confidence 55432100 12236999999999988877654 4799999999999998743221
Q ss_pred --------------------CCchhhHHHHHHHHhhh
Q psy11190 214 --------------------PLEVGAATAGIIQFIQS 230 (248)
Q Consensus 214 --------------------~~~~~~~~~~~~~~~~~ 230 (248)
...++++++.++.++..
T Consensus 208 ~~~~~~~g~~~~~~~~~~~~~i~v~Dva~a~~~~~~~ 244 (337)
T 2c29_D 208 TALSPITGNEAHYSIIRQGQFVHLDDLCNAHIYLFEN 244 (337)
T ss_dssp HHTHHHHTCGGGHHHHTEEEEEEHHHHHHHHHHHHHC
T ss_pred HHHHHHcCCCccccccCCCCEEEHHHHHHHHHHHhcC
Confidence 23577788888887754
|
| >4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A | Back alignment and structure |
|---|
Probab=99.84 E-value=1e-20 Score=162.27 Aligned_cols=207 Identities=14% Similarity=0.058 Sum_probs=150.4
Q ss_pred CceEEEecCCCchhHHHHHHHH-hCCCCCCceEEEeecCchhH------------HHHH-HHHhhcCCceeEEeeccCCc
Q psy11190 1 MKSILITGCNRGLGLGMIKVLV-GLGNNQPAHIFATCRNKDKA------------VELL-ALAQQHSNLHVIELDVTDFS 66 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~-~~g~~~~~~V~~~~r~~~~~------------~~~~-~~~~~~~~~~~~~~D~~~~~ 66 (248)
.|++||||||+|||++++..|+ +.| +.|+++.++.+.. ..+. .....+.+...+.+|+++.+
T Consensus 50 pK~vLVtGaSsGiGlA~AialAf~~G----A~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e 125 (401)
T 4ggo_A 50 PKNVLVLGCSNGYGLASRITAAFGYG----AATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDE 125 (401)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHHHC----CEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHH
T ss_pred CCEEEEECCCCcHHHHHHHHHHhhCC----CCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHH
Confidence 3899999999999999999998 678 7888888765421 2232 33445678999999999999
Q ss_pred hhhhhHHHHhhhhhcCCCccEEEeccccCCccc------------cC---------------------CCCChhhhhhee
Q psy11190 67 KQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFT------------RL---------------------GLLKPEQMTDHF 113 (248)
Q Consensus 67 ~~v~~~~~~i~~~~~~~~iD~lv~~ag~~~~~~------------~~---------------------~~~~~~~~~~~~ 113 (248)
. ++++++.+.+.+| ++|+||||++...... ++ ...+.++++...
T Consensus 126 ~-i~~vi~~i~~~~G--~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~ 202 (401)
T 4ggo_A 126 I-KAQVIEEAKKKGI--KFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATV 202 (401)
T ss_dssp H-HHHHHHHHHHTTC--CEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHH
T ss_pred H-HHHHHHHHHHhcC--CCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHH
Confidence 9 9999999999998 6999999999763200 00 112333333333
Q ss_pred ---eecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcccccCCCCCccchhhHHHHHHHHHHHHhhcc
Q psy11190 114 ---LVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLK 190 (248)
Q Consensus 114 ---~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~ 190 (248)
....++.+...+...++|. ++++++.+|+..+....+ ....+.++++|++|+..++.|+.+++
T Consensus 203 ~vMg~s~~s~w~~al~~a~lla-------------~G~siva~SYiGse~t~P-~Y~~G~mG~AKaaLEa~~r~La~eL~ 268 (401)
T 4ggo_A 203 KVMGGEDWERWIKQLSKEGLLE-------------EGCITLAYSYIGPEATQA-LYRKGTIGKAKEHLEATAHRLNKENP 268 (401)
T ss_dssp HHHSSHHHHHHHHHHHHTTCEE-------------EEEEEEEEECCCCGGGHH-HHTTSHHHHHHHHHHHHHHHHHHHCT
T ss_pred HHHhhhHHHHHHHHHHhhhccc-------------CCceEEEEeccCcceeec-CCCccHHHHHHHHHHHHHHHHHHhcC
Confidence 3334444555555666664 368999999987765441 13445789999999999999999998
Q ss_pred CCCeEEEEecCcceecCCCCCCCC---------------CchhhHHHHHHHHhhh
Q psy11190 191 GDKIIATAMHPGWVKTDMGGSNAP---------------LEVGAATAGIIQFIQS 230 (248)
Q Consensus 191 ~~~i~v~~v~PG~v~t~~~~~~~~---------------~~~~~~~~~~~~~~~~ 230 (248)
+ +++|++.||.+.|.-....+. ..-|.++.++..+..+
T Consensus 269 ~--~~a~v~v~~a~vT~AssaIP~~ply~~~l~kvmk~~g~heg~ieq~~rl~~~ 321 (401)
T 4ggo_A 269 S--IRAFVSVNKGLVTRASAVIPVIPLYLASLFKVMKEKGNHEGCIEQITRLYAE 321 (401)
T ss_dssp T--EEEEEEECCCCCCTTGGGSSSHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHH
T ss_pred C--CcEEEEEcCccccchhhcCCCchHHHHHHHHHHHhcCCCCchHHHHHHHHHH
Confidence 5 899999999999998766652 2346666776666654
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=4.3e-21 Score=164.06 Aligned_cols=198 Identities=21% Similarity=0.166 Sum_probs=143.9
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||+|+||++++++|+++| ++|++++|+.....++. ....++.++.+|++|.++ +..+++++ +
T Consensus 21 ~~vlVTGasG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~---~~l~~v~~~~~Dl~d~~~-~~~~~~~~----~ 88 (330)
T 2pzm_A 21 MRILITGGAGCLGSNLIEHWLPQG----HEILVIDNFATGKREVL---PPVAGLSVIEGSVTDAGL-LERAFDSF----K 88 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHGGGT----CEEEEEECCSSSCGGGS---CSCTTEEEEECCTTCHHH-HHHHHHHH----C
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC----CEEEEEECCCccchhhh---hccCCceEEEeeCCCHHH-HHHHHhhc----C
Confidence 579999999999999999999999 99999999754422110 111467889999999888 77776654 3
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
+|+||||||.... . +.++++ +++|+.+++++++++.+. +.++||++||...+..
T Consensus 89 ---~D~vih~A~~~~~-~-----~~~~~~--~~~N~~~~~~l~~a~~~~---------------~~~~iV~~SS~~~~~~ 142 (330)
T 2pzm_A 89 ---PTHVVHSAAAYKD-P-----DDWAED--AATNVQGSINVAKAASKA---------------GVKRLLNFQTALCYGR 142 (330)
T ss_dssp ---CSEEEECCCCCSC-T-----TCHHHH--HHHHTHHHHHHHHHHHHH---------------TCSEEEEEEEGGGGCS
T ss_pred ---CCEEEECCccCCC-c-----cccChh--HHHHHHHHHHHHHHHHHc---------------CCCEEEEecCHHHhCC
Confidence 9999999997543 1 345555 899999999999988742 4679999999876432
Q ss_pred ccCC--C------CCccchhhHHHHHHHHHHHHhhccCCCeE-EEEecCcceecCCC---------C--------CCCCC
Q psy11190 162 DNTQ--G------GFHPYRCSKAALNAATRSLSIDLKGDKII-ATAMHPGWVKTDMG---------G--------SNAPL 215 (248)
Q Consensus 162 ~~~~--~------~~~~y~~sK~a~~~~~~~la~e~~~~~i~-v~~v~PG~v~t~~~---------~--------~~~~~ 215 (248)
.... + +...|+.+|++++.+++.+ ++....+| ++.+.||. .+++. . .....
T Consensus 143 ~~~~~~~~~E~~~~~~~Y~~sK~~~e~~~~~~--~~~~~~iR~~~v~gp~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i 219 (330)
T 2pzm_A 143 PATVPIPIDSPTAPFTSYGISKTAGEAFLMMS--DVPVVSLRLANVTGPRL-AIGPIPTFYKRLKAGQKCFCSDTVRDFL 219 (330)
T ss_dssp CSSSSBCTTCCCCCCSHHHHHHHHHHHHHHTC--SSCEEEEEECEEECTTC-CSSHHHHHHHHHHTTCCCCEESCEECEE
T ss_pred CccCCCCcCCCCCCCChHHHHHHHHHHHHHHc--CCCEEEEeeeeeECcCC-CCCHHHHHHHHHHcCCEEeCCCCEecce
Confidence 2110 1 5678999999999999887 55555677 67787875 33321 0 01235
Q ss_pred chhhHHH-HHHHHhhhcccccccceeeeCC
Q psy11190 216 EVGAATA-GIIQFIQSLGEAHNGGFFEYTG 244 (248)
Q Consensus 216 ~~~~~~~-~~~~~~~~~~~~~~g~~~~~~g 244 (248)
.++++++ .++.++.... |..|...+
T Consensus 220 ~~~Dva~~a~~~~~~~~~----g~~~~v~~ 245 (330)
T 2pzm_A 220 DMSDFLAIADLSLQEGRP----TGVFNVST 245 (330)
T ss_dssp EHHHHHHHHHHHTSTTCC----CEEEEESC
T ss_pred eHHHHHHHHHHHHhhcCC----CCEEEeCC
Confidence 7889999 8888887632 56666654
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.84 E-value=3.2e-20 Score=159.30 Aligned_cols=207 Identities=15% Similarity=0.082 Sum_probs=146.2
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchh--HHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDK--AVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
||++|||||+|+||++++++|+++|.. .+|+..+|.... ...+.. .....++.++++|++|.+. +..+++..
T Consensus 24 ~~~vlVtGatG~iG~~l~~~L~~~g~~--~~v~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~Dl~d~~~-~~~~~~~~-- 97 (346)
T 4egb_A 24 AMNILVTGGAGFIGSNFVHYMLQSYET--YKIINFDALTYSGNLNNVKS-IQDHPNYYFVKGEIQNGEL-LEHVIKER-- 97 (346)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHCTT--EEEEEEECCCTTCCGGGGTT-TTTCTTEEEEECCTTCHHH-HHHHHHHH--
T ss_pred CCeEEEECCccHHHHHHHHHHHhhCCC--cEEEEEeccccccchhhhhh-hccCCCeEEEEcCCCCHHH-HHHHHhhc--
Confidence 468999999999999999999999832 677777776421 111111 1123578999999999888 77776552
Q ss_pred hhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 79 VVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
++|+|||+|+.... ..+.++.+..+++|+.++.++++++.+. +..++|++||...
T Consensus 98 -----~~d~Vih~A~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~~~---------------~~~~~v~~SS~~v 152 (346)
T 4egb_A 98 -----DVQVIVNFAAESHV-----DRSIENPIPFYDTNVIGTVTLLELVKKY---------------PHIKLVQVSTDEV 152 (346)
T ss_dssp -----TCCEEEECCCCC--------------CHHHHHHTHHHHHHHHHHHHS---------------TTSEEEEEEEGGG
T ss_pred -----CCCEEEECCcccch-----hhhhhCHHHHHHHHHHHHHHHHHHHHhc---------------CCCEEEEeCchHH
Confidence 39999999997643 2244667788899999999988887543 3568999999754
Q ss_pred cccc---------cCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC----------------
Q psy11190 159 SIED---------NTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA---------------- 213 (248)
Q Consensus 159 ~~~~---------~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~---------------- 213 (248)
+... .+..+...|+.+|.+.+.+++.++.+. |++++.+.||.+..|......
T Consensus 153 y~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~ 229 (346)
T 4egb_A 153 YGSLGKTGRFTEETPLAPNSPYSSSKASADMIALAYYKTY---QLPVIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLP 229 (346)
T ss_dssp GCCCCSSCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCCE
T ss_pred hCCCCcCCCcCCCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeecceeCcCCCccchHHHHHHHHHcCCCce
Confidence 4322 011234679999999999999998774 799999999999887643211
Q ss_pred ----------CCchhhHHHHHHHHhhhcccccccceeeeCC
Q psy11190 214 ----------PLEVGAATAGIIQFIQSLGEAHNGGFFEYTG 244 (248)
Q Consensus 214 ----------~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g 244 (248)
...++++++.++..+.... .|..|...+
T Consensus 230 ~~~~~~~~~~~i~v~Dva~a~~~~~~~~~---~g~~~~i~~ 267 (346)
T 4egb_A 230 LYGDGLNVRDWLHVTDHCSAIDVVLHKGR---VGEVYNIGG 267 (346)
T ss_dssp EETTSCCEECEEEHHHHHHHHHHHHHHCC---TTCEEEECC
T ss_pred eeCCCCeEEeeEEHHHHHHHHHHHHhcCC---CCCEEEECC
Confidence 1347889999998887743 555555444
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=5.1e-20 Score=146.39 Aligned_cols=189 Identities=13% Similarity=0.105 Sum_probs=136.5
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|+++||||+|+||++++++|+++| ++|++++|+.++.... ...++.++++|++|.++ +.++++
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g----~~V~~~~r~~~~~~~~-----~~~~~~~~~~D~~~~~~-~~~~~~------- 66 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAG----YEVTVLVRDSSRLPSE-----GPRPAHVVVGDVLQAAD-VDKTVA------- 66 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT----CEEEEEESCGGGSCSS-----SCCCSEEEESCTTSHHH-HHHHHT-------
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCC----CeEEEEEeChhhcccc-----cCCceEEEEecCCCHHH-HHHHHc-------
Confidence 589999999999999999999999 9999999997654321 13578899999999877 554432
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+|||+||.... . + ..++|+.++.++++.+.+ . +.+++|++||......
T Consensus 67 --~~d~vi~~a~~~~~----~--~------~~~~n~~~~~~~~~~~~~----~-----------~~~~~v~~Ss~~~~~~ 117 (206)
T 1hdo_A 67 --GQDAVIVLLGTRND----L--S------PTTVMSEGARNIVAAMKA----H-----------GVDKVVACTSAFLLWD 117 (206)
T ss_dssp --TCSEEEECCCCTTC----C--S------CCCHHHHHHHHHHHHHHH----H-----------TCCEEEEECCGGGTSC
T ss_pred --CCCEEEECccCCCC----C--C------ccchHHHHHHHHHHHHHH----h-----------CCCeEEEEeeeeeccC
Confidence 38999999986532 0 1 123677777666666543 2 4578999999865433
Q ss_pred ccCCC-CCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcce-ecCCCCC----------CCCCchhhHHHHHHHHhh
Q psy11190 162 DNTQG-GFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWV-KTDMGGS----------NAPLEVGAATAGIIQFIQ 229 (248)
Q Consensus 162 ~~~~~-~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v-~t~~~~~----------~~~~~~~~~~~~~~~~~~ 229 (248)
....+ +...|+.+|.+++.+++. .+++++.+.||++ .++.... .....++++++.++..+.
T Consensus 118 ~~~~~~~~~~y~~~K~~~e~~~~~-------~~i~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~ 190 (206)
T 1hdo_A 118 PTKVPPRLQAVTDDHIRMHKVLRE-------SGLKYVAVMPPHIGDQPLTGAYTVTLDGRGPSRVISKHDLGHFMLRCLT 190 (206)
T ss_dssp TTCSCGGGHHHHHHHHHHHHHHHH-------TCSEEEEECCSEEECCCCCSCCEEESSSCSSCSEEEHHHHHHHHHHTTS
T ss_pred cccccccchhHHHHHHHHHHHHHh-------CCCCEEEEeCCcccCCCCCcceEecccCCCCCCccCHHHHHHHHHHHhc
Confidence 21101 456899999999988742 5799999999998 4443221 123568999999999887
Q ss_pred hcccccccceeeeCCe
Q psy11190 230 SLGEAHNGGFFEYTGK 245 (248)
Q Consensus 230 ~~~~~~~g~~~~~~g~ 245 (248)
.+ ...|+.+...|.
T Consensus 191 ~~--~~~g~~~~i~~g 204 (206)
T 1hdo_A 191 TD--EYDGHSTYPSHQ 204 (206)
T ss_dssp CS--TTTTCEEEEECC
T ss_pred Cc--cccccceeeecc
Confidence 73 356777776654
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.83 E-value=2.2e-19 Score=144.33 Aligned_cols=188 Identities=16% Similarity=0.190 Sum_probs=129.8
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
+++|||||+|+||++++++|+++| ++|++++|+.+++.++. .++.++++|++|.++ +.+.
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g----~~V~~~~R~~~~~~~~~------~~~~~~~~D~~d~~~----------~~~~ 60 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRG----HEVTAIVRNAGKITQTH------KDINILQKDIFDLTL----------SDLS 60 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT----CEEEEEESCSHHHHHHC------SSSEEEECCGGGCCH----------HHHT
T ss_pred CeEEEEcCCchhHHHHHHHHHhCC----CEEEEEEcCchhhhhcc------CCCeEEeccccChhh----------hhhc
Confidence 149999999999999999999999 99999999987655432 578999999998764 2222
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+|||+||.... ...+ .+..++.+++.+++. +.+++|++||..+..+
T Consensus 61 --~~d~vi~~ag~~~~--------------~~~~----~~~~~~~l~~a~~~~-----------~~~~~v~~SS~~~~~~ 109 (221)
T 3ew7_A 61 --DQNVVVDAYGISPD--------------EAEK----HVTSLDHLISVLNGT-----------VSPRLLVVGGAASLQI 109 (221)
T ss_dssp --TCSEEEECCCSSTT--------------TTTS----HHHHHHHHHHHHCSC-----------CSSEEEEECCCC----
T ss_pred --CCCEEEECCcCCcc--------------ccch----HHHHHHHHHHHHHhc-----------CCceEEEEecceEEEc
Confidence 49999999997421 0122 344455666666553 4689999999887655
Q ss_pred ccC---------CCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC----------------CCCCc
Q psy11190 162 DNT---------QGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS----------------NAPLE 216 (248)
Q Consensus 162 ~~~---------~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~----------------~~~~~ 216 (248)
.+. ..+...|+.+|.+.+.+. .+.. ...|++++.|.||++.++.... .....
T Consensus 110 ~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~-~~~~--~~~gi~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~i~ 186 (221)
T 3ew7_A 110 DEDGNTLLESKGLREAPYYPTARAQAKQLE-HLKS--HQAEFSWTYISPSAMFEPGERTGDYQIGKDHLLFGSDGNSFIS 186 (221)
T ss_dssp ---------------CCCSCCHHHHHHHHH-HHHT--TTTTSCEEEEECSSCCCCC---------------------CCC
T ss_pred CCCCccccccCCCCCHHHHHHHHHHHHHHH-HHHh--hccCccEEEEeCcceecCCCccCceEeccccceecCCCCceEe
Confidence 421 113456999999998873 3332 1568999999999998762111 11467
Q ss_pred hhhHHHHHHHHhhhcccccccceeeeCCe
Q psy11190 217 VGAATAGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
++++++.++..+..+ ...|+.|..-|.
T Consensus 187 ~~Dva~~~~~~l~~~--~~~g~~~~~~~~ 213 (221)
T 3ew7_A 187 MEDYAIAVLDEIERP--NHLNEHFTVAGK 213 (221)
T ss_dssp HHHHHHHHHHHHHSC--SCTTSEEECCC-
T ss_pred HHHHHHHHHHHHhCc--cccCCEEEECCC
Confidence 899999999999874 345666655543
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.83 E-value=2.1e-20 Score=158.74 Aligned_cols=201 Identities=16% Similarity=0.136 Sum_probs=136.2
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeec-Cchh---HHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCR-NKDK---AVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDI 76 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r-~~~~---~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i 76 (248)
.|++|||||+|+||++++++|+++| +.|+++.| +.+. ...+.++.....++.++++|++|.++ ++.+++
T Consensus 1 ~k~vlVTGatG~iG~~l~~~L~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~-~~~~~~-- 73 (322)
T 2p4h_X 1 KGRVCVTGGTGFLGSWIIKSLLENG----YSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDS-FAAAIE-- 73 (322)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTT----CEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGG-GHHHHT--
T ss_pred CCEEEEECChhHHHHHHHHHHHHCC----CEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHH-HHHHHc--
Confidence 4789999999999999999999999 89999988 6532 22221111111256788999999887 655432
Q ss_pred hhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecC
Q psy11190 77 SDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSI 156 (248)
Q Consensus 77 ~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~ 156 (248)
++|+|||+|+... +. ..+.++..+++|+.+++++++++.+.. +.++||++||.
T Consensus 74 -------~~d~vih~A~~~~----~~--~~~~~~~~~~~nv~gt~~l~~aa~~~~--------------~~~~iV~~SS~ 126 (322)
T 2p4h_X 74 -------GCVGIFHTASPID----FA--VSEPEEIVTKRTVDGALGILKACVNSK--------------TVKRFIYTSSG 126 (322)
T ss_dssp -------TCSEEEECCCCC--------------CHHHHHHHHHHHHHHHHHTTCS--------------SCCEEEEEEEG
T ss_pred -------CCCEEEEcCCccc----CC--CCChHHHHHHHHHHHHHHHHHHHHhcC--------------CccEEEEeccH
Confidence 3899999996321 11 111235578899999999999887641 24689999998
Q ss_pred CCcccccCCC------------------CC-ccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC----
Q psy11190 157 MGSIEDNTQG------------------GF-HPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA---- 213 (248)
Q Consensus 157 ~~~~~~~~~~------------------~~-~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~---- 213 (248)
.+..+..... +. ..|+.+|.+.+.+++.++.+ +|++++.+.||.+.+|+.....
T Consensus 127 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrp~~v~g~~~~~~~~~~~ 203 (322)
T 2p4h_X 127 SAVSFNGKDKDVLDESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQ---NGIDVVTLILPFIVGRFVCPKLPDSI 203 (322)
T ss_dssp GGTSCSSSCCSEECTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHH---TTCCEEEEEECEEESCCCSSSCCHHH
T ss_pred HHcccCCCCCeecCCccccchhhhcccCcccccHHHHHHHHHHHHHHHHHh---cCCcEEEEcCCceECCCCCCCCCchH
Confidence 7554321100 01 15999999888877766543 5899999999999998743210
Q ss_pred --------------------CCchhhHHHHHHHHhhhccccccccee
Q psy11190 214 --------------------PLEVGAATAGIIQFIQSLGEAHNGGFF 240 (248)
Q Consensus 214 --------------------~~~~~~~~~~~~~~~~~~~~~~~g~~~ 240 (248)
...++++++.++.++... ..+|.|.
T Consensus 204 ~~~~~~~~g~~~~~~~~~~~~i~v~Dva~a~~~~~~~~--~~~g~~~ 248 (322)
T 2p4h_X 204 EKALVLVLGKKEQIGVTRFHMVHVDDVARAHIYLLENS--VPGGRYN 248 (322)
T ss_dssp HHHTHHHHSCGGGCCEEEEEEEEHHHHHHHHHHHHHSC--CCCEEEE
T ss_pred HHHHHHHhCCCccCcCCCcCEEEHHHHHHHHHHHhhCc--CCCCCEE
Confidence 246788888888887652 2455543
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.83 E-value=1e-19 Score=160.87 Aligned_cols=196 Identities=17% Similarity=0.137 Sum_probs=141.3
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhH---HHHHHHH----------hhcCCceeEEeeccCCch
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKA---VELLALA----------QQHSNLHVIELDVTDFSK 67 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~---~~~~~~~----------~~~~~~~~~~~D~~~~~~ 67 (248)
||++|||||+|+||++++++|+++| ++|++++|+.+.. +.+.+.. ....++.++.+|++|.+.
T Consensus 69 ~~~vlVTGatG~iG~~l~~~L~~~g----~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~ 144 (427)
T 4f6c_A 69 LGNTLLTGATGFLGAYLIEALQGYS----HRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDD 144 (427)
T ss_dssp CEEEEEECTTSHHHHHHHHHHTTTE----EEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CC
T ss_pred CCEEEEecCCcHHHHHHHHHHHcCC----CEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCccc
Confidence 4689999999999999999999988 9999999998732 2332211 123689999999999877
Q ss_pred hhhhHHHHhhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCC
Q psy11190 68 QQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSR 147 (248)
Q Consensus 68 ~v~~~~~~i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~ 147 (248)
+. .++ ++|+||||||.... .++++..+++|+.++.++++.+.+ . .
T Consensus 145 -l~--------~~~--~~d~Vih~A~~~~~--------~~~~~~~~~~Nv~g~~~l~~aa~~---~-------------~ 189 (427)
T 4f6c_A 145 -VV--------LPE--NMDTIIHAGARTDH--------FGDDDEFEKVNVQGTVDVIRLAQQ---H-------------H 189 (427)
T ss_dssp -CC--------CSS--CCSEEEECCCCC---------------CHHHHHHHHHHHHHHHHHH---T-------------T
T ss_pred -CC--------CcC--CCCEEEECCcccCC--------CCCHHHHHHHHHHHHHHHHHHHHh---c-------------C
Confidence 55 222 59999999997532 246778889999999999998876 1 4
Q ss_pred ceEEEeecCCCcccc----------------cCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC
Q psy11190 148 AAIVNVSSIMGSIED----------------NTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS 211 (248)
Q Consensus 148 ~~iv~vss~~~~~~~----------------~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~ 211 (248)
.++|++||... ... .+..+...|+.+|.+.+.+++.++. +|++++.+.||.+.++....
T Consensus 190 ~~~v~~SS~~~-G~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~ivRpg~v~G~~~~~ 264 (427)
T 4f6c_A 190 ARLIYVSTISV-GTYFDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NGLDGRIVRVGNLTSPYNGR 264 (427)
T ss_dssp CEEEEEEEGGG-GSEECSSCSCCEECTTCSCSSCCCCSHHHHHHHHHHHHHHHHHH----TTCCEEEEEECCEESCSSSC
T ss_pred CcEEEECchHh-CCCccCCCCCccccccccccCCCCCCchHHHHHHHHHHHHHHHH----cCCCEEEEeCCeeecCCCCC
Confidence 67999999876 110 0023567899999999999998763 58999999999998886543
Q ss_pred CC--------------------------------CCchhhHHHHHHHHhhhcccccccceeeeC
Q psy11190 212 NA--------------------------------PLEVGAATAGIIQFIQSLGEAHNGGFFEYT 243 (248)
Q Consensus 212 ~~--------------------------------~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 243 (248)
.. ...++++++.++.++.... .+..|...
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~DvA~ai~~~~~~~~---~g~~~~l~ 325 (427)
T 4f6c_A 265 WHMRNIKTNRFSMVMNDLLQLDCIGVSMAEMPVDFSFVDTTARQIVALAQVNT---PQIIYHVL 325 (427)
T ss_dssp CCCTTGGGCHHHHHHHHHHHSSEEEHHHHTCEECCEEHHHHHHHHHHHTTSCC---CCSEEEES
T ss_pred ccccCcchHHHHHHHHHHHhcCCCCCccccceEEEeeHHHHHHHHHHHHcCCC---CCCEEEec
Confidence 20 2346888888888877643 45555543
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.83 E-value=6.3e-20 Score=159.30 Aligned_cols=198 Identities=13% Similarity=-0.005 Sum_probs=140.2
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchh-----HHHHHHHHh--hcCCceeEEeeccCCchhhhhHHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDK-----AVELLALAQ--QHSNLHVIELDVTDFSKQQDVLFK 74 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~-----~~~~~~~~~--~~~~~~~~~~D~~~~~~~v~~~~~ 74 (248)
|++|||||+|+||++++++|+++| ++|++++|+.+. ++.+.+... ...++.++.+|++|.++ +..+++
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~-~~~~~~ 99 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLEKG----YEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTC-LVKIIN 99 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT----CEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHH-HHHHHH
T ss_pred cEEEEECCCchHHHHHHHHHHHCC----CEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHH-HHHHHH
Confidence 789999999999999999999999 899999998653 222111000 13468889999999888 777765
Q ss_pred HhhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEee
Q psy11190 75 DISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVS 154 (248)
Q Consensus 75 ~i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vs 154 (248)
.+ ++|+|||+||.... ..+.++++..+++|+.++.++++++.+...+ +.++||++|
T Consensus 100 ~~-------~~d~vih~A~~~~~-----~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~------------~~~~iv~~S 155 (375)
T 1t2a_A 100 EV-------KPTEIYNLGAQSHV-----KISFDLAEYTADVDGVGTLRLLDAVKTCGLI------------NSVKFYQAS 155 (375)
T ss_dssp HH-------CCSEEEECCSCCCH-----HHHHHSHHHHHHHHTHHHHHHHHHHHHTTCT------------TTCEEEEEE
T ss_pred hc-------CCCEEEECCCcccc-----cccccCHHHHHHHHHHHHHHHHHHHHHhCCC------------ccceEEEec
Confidence 54 28999999997543 1134677888999999999999988765321 237899999
Q ss_pred cCCCccccc--------CCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC---------------
Q psy11190 155 SIMGSIEDN--------TQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS--------------- 211 (248)
Q Consensus 155 s~~~~~~~~--------~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~--------------- 211 (248)
|...+.... +..+...|+.+|++.+.+++.++.++ ++++..+.|+.+..|....
T Consensus 156 S~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~ 232 (375)
T 1t2a_A 156 TSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAY---NLFAVNGILFNHESPRRGANFVTRKISRSVAKIY 232 (375)
T ss_dssp EGGGTCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHH
T ss_pred chhhhCCCCCCCCCccCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEecccccCCCCCCCcchHHHHHHHHHHH
Confidence 977653211 11345689999999999999998775 4666666655443331100
Q ss_pred ---------------CCCCchhhHHHHHHHHhhhc
Q psy11190 212 ---------------NAPLEVGAATAGIIQFIQSL 231 (248)
Q Consensus 212 ---------------~~~~~~~~~~~~~~~~~~~~ 231 (248)
.....++++++.++..+...
T Consensus 233 ~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~~~~~ 267 (375)
T 1t2a_A 233 LGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQND 267 (375)
T ss_dssp HTSCSCEEESCTTCEECCEEHHHHHHHHHHHHHSS
T ss_pred cCCCceeEeCCCCceeeeEEHHHHHHHHHHHHhcC
Confidence 01345788888888887653
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=7e-20 Score=160.02 Aligned_cols=172 Identities=16% Similarity=0.048 Sum_probs=130.2
Q ss_pred ceEEEecCCCchhHHHHHHHH-hCCCCCCceEEEeecCchh---------HHHHHHHHhh------cCC---ceeEEeec
Q psy11190 2 KSILITGCNRGLGLGMIKVLV-GLGNNQPAHIFATCRNKDK---------AVELLALAQQ------HSN---LHVIELDV 62 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~-~~g~~~~~~V~~~~r~~~~---------~~~~~~~~~~------~~~---~~~~~~D~ 62 (248)
+++|||||+|+||++++++|+ ++| ++|++++|+... .+.+.+.... ..+ +.++.+|+
T Consensus 3 m~vlVTGatG~iG~~l~~~L~~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl 78 (397)
T 1gy8_A 3 MRVLVCGGAGYIGSHFVRALLRDTN----HSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDV 78 (397)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCC----CEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCT
T ss_pred CEEEEECCCCHHHHHHHHHHHHhCC----CEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCC
Confidence 379999999999999999999 999 899999997654 3333221111 124 88999999
Q ss_pred cCCchhhhhHHHHhhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCC
Q psy11190 63 TDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAP 142 (248)
Q Consensus 63 ~~~~~~v~~~~~~i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~ 142 (248)
+|.++ +..++++ ++ ++|+|||+||.... . .+.++++..+++|+.+++++++++...
T Consensus 79 ~d~~~-~~~~~~~----~~--~~d~vih~A~~~~~-~----~~~~~~~~~~~~Nv~g~~~ll~a~~~~------------ 134 (397)
T 1gy8_A 79 RNEDF-LNGVFTR----HG--PIDAVVHMCAFLAV-G----ESVRDPLKYYDNNVVGILRLLQAMLLH------------ 134 (397)
T ss_dssp TCHHH-HHHHHHH----SC--CCCEEEECCCCCCH-H----HHHHCHHHHHHHHHHHHHHHHHHHHHT------------
T ss_pred CCHHH-HHHHHHh----cC--CCCEEEECCCccCc-C----cchhhHHHHHHHHhHHHHHHHHHHHHh------------
Confidence 99888 7766543 22 39999999997643 1 134667888999999999999875432
Q ss_pred CCCCCceEEEeecCCCcccccC----------------CCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceec
Q psy11190 143 LGSSRAAIVNVSSIMGSIEDNT----------------QGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKT 206 (248)
Q Consensus 143 ~~~~~~~iv~vss~~~~~~~~~----------------~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t 206 (248)
+.++||++||.+.+ +... ..+...|+.+|++.+.+++.++.++ |++++++.|+.+..
T Consensus 135 ---~~~~iv~~SS~~v~-g~~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilRp~~v~G 207 (397)
T 1gy8_A 135 ---KCDKIIFSSSAAIF-GNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY---GIKGICLRYFNACG 207 (397)
T ss_dssp ---TCCEEEEEEEGGGT-BSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEEC
T ss_pred ---CCCEEEEECCHHHh-CCCCcccccccccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHH---CCcEEEEeccceeC
Confidence 45789999996543 2211 0125689999999999999999886 79999999999976
Q ss_pred CC
Q psy11190 207 DM 208 (248)
Q Consensus 207 ~~ 208 (248)
+.
T Consensus 208 ~~ 209 (397)
T 1gy8_A 208 AH 209 (397)
T ss_dssp CC
T ss_pred CC
Confidence 63
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=6.1e-20 Score=157.58 Aligned_cols=172 Identities=20% Similarity=0.166 Sum_probs=128.6
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchh-------HHHHHHHHh-hcCCceeEEeeccCCchhhhhHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDK-------AVELLALAQ-QHSNLHVIELDVTDFSKQQDVLF 73 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~-------~~~~~~~~~-~~~~~~~~~~D~~~~~~~v~~~~ 73 (248)
|++|||||+|+||++++++|+++| ++|++++|+... .+.+.++.. ...++.++.+|++|.++ ++.++
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g----~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~-~~~~~ 77 (348)
T 1ek6_A 3 EKVLVTGGAGYIGSHTVLELLEAG----YLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGA-LQRLF 77 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTT----CCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHH-HHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC----CEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHH-HHHHH
Confidence 689999999999999999999999 899999886432 122222221 24578899999999887 77665
Q ss_pred HHhhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEe
Q psy11190 74 KDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNV 153 (248)
Q Consensus 74 ~~i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~v 153 (248)
+.. ++|+|||+||.... . .+.++++..+++|+.++.++++.+.. . +.++||++
T Consensus 78 ~~~-------~~d~vih~A~~~~~-~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~-----------~~~~iv~~ 130 (348)
T 1ek6_A 78 KKY-------SFMAVIHFAGLKAV-G----ESVQKPLDYYRVNLTGTIQLLEIMKA----H-----------GVKNLVFS 130 (348)
T ss_dssp HHC-------CEEEEEECCSCCCH-H----HHHHCHHHHHHHHHHHHHHHHHHHHH----T-----------TCCEEEEE
T ss_pred Hhc-------CCCEEEECCCCcCc-c----chhhchHHHHHHHHHHHHHHHHHHHH----h-----------CCCEEEEE
Confidence 542 39999999997543 1 13456778889999999999886533 2 45789999
Q ss_pred ecCCCcccc---------cCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecC
Q psy11190 154 SSIMGSIED---------NTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTD 207 (248)
Q Consensus 154 ss~~~~~~~---------~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~ 207 (248)
||...+... +..+....|+.+|++.+.+++.++.+ ..+++++.+.|+.+..+
T Consensus 131 SS~~~~g~~~~~~~~E~~~~~p~~~~Y~~sK~~~e~~~~~~~~~--~~~~~~~~lR~~~v~G~ 191 (348)
T 1ek6_A 131 SSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQA--DKTWNAVLLRYFNPTGA 191 (348)
T ss_dssp EEGGGGCSCSSSSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHH--CTTCEEEEEEECEEECC
T ss_pred CcHHHhCCCCCCCcCCCCCCCCCCCchHHHHHHHHHHHHHHHhc--CCCcceEEEeeccccCC
Confidence 997654321 01122678999999999999999887 34699999999888655
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.82 E-value=6.1e-20 Score=156.46 Aligned_cols=168 Identities=17% Similarity=0.084 Sum_probs=128.7
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
||++|||||+|+||++++++|+++| ++|++++|+.....+ . ...++.++.+|++|.++ +..++++ .
T Consensus 1 M~~ilVtGatG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~---~--~~~~~~~~~~D~~~~~~-~~~~~~~----~ 66 (330)
T 2c20_A 1 MNSILICGGAGYIGSHAVKKLVDEG----LSVVVVDNLQTGHED---A--ITEGAKFYNGDLRDKAF-LRDVFTQ----E 66 (330)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTT----CEEEEEECCSSCCGG---G--SCTTSEEEECCTTCHHH-HHHHHHH----S
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCC----CEEEEEeCCCcCchh---h--cCCCcEEEECCCCCHHH-HHHHHhh----c
Confidence 8899999999999999999999999 899999987643221 0 12368899999999887 6666544 1
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
++|+|||+||.... . .+.++++..+++|+.++.++++++... +.+++|++||...+.
T Consensus 67 ---~~d~vih~a~~~~~-~----~~~~~~~~~~~~n~~~~~~l~~a~~~~---------------~~~~~v~~Ss~~~~~ 123 (330)
T 2c20_A 67 ---NIEAVMHFAADSLV-G----VSMEKPLQYYNNNVYGALCLLEVMDEF---------------KVDKFIFSSTAATYG 123 (330)
T ss_dssp ---CEEEEEECCCCCCH-H----HHHHSHHHHHHHHHHHHHHHHHHHHHT---------------TCCEEEEECCGGGGC
T ss_pred ---CCCEEEECCcccCc-c----ccccCHHHHHHHHhHHHHHHHHHHHHc---------------CCCEEEEeCCceeeC
Confidence 49999999997543 1 134567888899999999998876431 356899999976543
Q ss_pred ccc--------CCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCC
Q psy11190 161 EDN--------TQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208 (248)
Q Consensus 161 ~~~--------~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~ 208 (248)
... +..+...|+.+|.+.+.+++.++.++ |++++.+.||.+..+.
T Consensus 124 ~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~G~~ 176 (330)
T 2c20_A 124 EVDVDLITEETMTNPTNTYGETKLAIEKMLHWYSQAS---NLRYKIFRYFNVAGAT 176 (330)
T ss_dssp SCSSSSBCTTSCCCCSSHHHHHHHHHHHHHHHHHHTS---SCEEEEEECSEEECCC
T ss_pred CCCCCCCCcCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEecCcccCCC
Confidence 210 11245789999999999999998764 7999999999887763
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=7.5e-20 Score=156.45 Aligned_cols=204 Identities=14% Similarity=0.086 Sum_probs=146.8
Q ss_pred ceEEEecCCCchhHHHHHHHHhC-CCCCC---ceEEEeecCch--hHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGL-GNNQP---AHIFATCRNKD--KAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKD 75 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~-g~~~~---~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~ 75 (248)
+++|||||+|+||++++++|+++ | .+ ++|++++|+.. ..+.+..+ ....++.++.+|++|.++ ++.++
T Consensus 1 M~vlVTGatG~iG~~l~~~L~~~~~--~g~~~~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~-~~~~~-- 74 (337)
T 1r6d_A 1 MRLLVTGGAGFIGSHFVRQLLAGAY--PDVPADEVIVLDSLTYAGNRANLAPV-DADPRLRFVHGDIRDAGL-LAREL-- 74 (337)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSC--TTSCCSEEEEEECCCTTCCGGGGGGG-TTCTTEEEEECCTTCHHH-HHHHT--
T ss_pred CeEEEECCccHHHHHHHHHHHhhhc--CCCCceEEEEEECCCccCchhhhhhc-ccCCCeEEEEcCCCCHHH-HHHHh--
Confidence 25999999999999999999985 4 23 68999998642 11111111 123578899999999877 55543
Q ss_pred hhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeec
Q psy11190 76 ISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSS 155 (248)
Q Consensus 76 i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss 155 (248)
. ++|+|||+||.... +.+.++++..+++|+.++.++++++.+. +.++||++||
T Consensus 75 -----~--~~d~Vih~A~~~~~-----~~~~~~~~~~~~~Nv~~~~~l~~a~~~~---------------~~~~~v~~SS 127 (337)
T 1r6d_A 75 -----R--GVDAIVHFAAESHV-----DRSIAGASVFTETNVQGTQTLLQCAVDA---------------GVGRVVHVST 127 (337)
T ss_dssp -----T--TCCEEEECCSCCCH-----HHHHHCCHHHHHHHTHHHHHHHHHHHHT---------------TCCEEEEEEE
T ss_pred -----c--CCCEEEECCCccCc-----hhhhhCHHHHHHHHHHHHHHHHHHHHHc---------------CCCEEEEecc
Confidence 2 49999999997532 1234567788899999999999988764 3468999999
Q ss_pred CCCcccc--------cCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC--------------
Q psy11190 156 IMGSIED--------NTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA-------------- 213 (248)
Q Consensus 156 ~~~~~~~--------~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~-------------- 213 (248)
.+.+... .+..+...|+.+|.+.+.+++.++.++ |++++.+.||.+.++......
T Consensus 128 ~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~ 204 (337)
T 1r6d_A 128 NQVYGSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTY---GLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGT 204 (337)
T ss_dssp GGGGCCCSSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCC
T ss_pred hHHhCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHH---CCCEEEEEeeeeECCCCCCCChHHHHHHHHhcCCC
Confidence 7643211 022456789999999999999998774 699999999999888643110
Q ss_pred ------------CCchhhHHHHHHHHhhhcccccccceeeeCC
Q psy11190 214 ------------PLEVGAATAGIIQFIQSLGEAHNGGFFEYTG 244 (248)
Q Consensus 214 ------------~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g 244 (248)
...++++++.++.++... ..|..|...+
T Consensus 205 ~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~---~~g~~~~v~~ 244 (337)
T 1r6d_A 205 LPLYGDGANVREWVHTDDHCRGIALVLAGG---RAGEIYHIGG 244 (337)
T ss_dssp EEEETTSCCEEEEEEHHHHHHHHHHHHHHC---CTTCEEEECC
T ss_pred cEEeCCCCeeEeeEeHHHHHHHHHHHHhCC---CCCCEEEeCC
Confidence 134788999988888653 2455555544
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.82 E-value=8e-20 Score=158.25 Aligned_cols=160 Identities=16% Similarity=0.064 Sum_probs=116.7
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhH--HHHHHHHh----hcCCceeEEeeccCCchhhhhHHH
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKA--VELLALAQ----QHSNLHVIELDVTDFSKQQDVLFK 74 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~--~~~~~~~~----~~~~~~~~~~D~~~~~~~v~~~~~ 74 (248)
||++|||||+|+||++++++|+++| ++|++++|+.+.. +.+..+.. ...++.++.+|++|.++ +..+++
T Consensus 1 m~~vlVtGatG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~-~~~~~~ 75 (372)
T 1db3_A 1 SKVALITGVTGQDGSYLAEFLLEKG----YEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSN-LTRILR 75 (372)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT----CEEEEECC---------------------CCEEECCCCSSCHHH-HHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC----CEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHH-HHHHHH
Confidence 8899999999999999999999999 8999999986542 22222211 13578889999999888 777766
Q ss_pred HhhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEee
Q psy11190 75 DISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVS 154 (248)
Q Consensus 75 ~i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vs 154 (248)
.+ ++|+|||+||.... ..+.++++..+++|+.++.++++.+.+...+ ..++||++|
T Consensus 76 ~~-------~~d~vih~A~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~------------~~~~iv~~S 131 (372)
T 1db3_A 76 EV-------QPDEVYNLGAMSHV-----AVSFESPEYTADVDAMGTLRLLEAIRFLGLE------------KKTRFYQAS 131 (372)
T ss_dssp HH-------CCSEEEECCCCCTT-----TTTTSCHHHHHHHHTHHHHHHHHHHHHTTCT------------TTCEEEEEE
T ss_pred hc-------CCCEEEECCcccCc-----cccccCHHHHHHHHHHHHHHHHHHHHHhCCC------------CCcEEEEeC
Confidence 54 28999999997543 2345667888999999999999988765321 137899999
Q ss_pred cCCCccccc--------CCCCCccchhhHHHHHHHHHHHHhhc
Q psy11190 155 SIMGSIEDN--------TQGGFHPYRCSKAALNAATRSLSIDL 189 (248)
Q Consensus 155 s~~~~~~~~--------~~~~~~~y~~sK~a~~~~~~~la~e~ 189 (248)
|.+.+.... +..+...|+.+|++.+.+++.++.++
T Consensus 132 S~~v~g~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~ 174 (372)
T 1db3_A 132 TSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESY 174 (372)
T ss_dssp EGGGGTTCCSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred ChhhhCCCCCCCCCccCCCCCCChHHHHHHHHHHHHHHHHHHh
Confidence 976543211 11345689999999999999999875
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=2.6e-19 Score=153.67 Aligned_cols=155 Identities=15% Similarity=0.081 Sum_probs=124.3
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
+|++|||||+|+||++++++|+++| ++|++++|+.+. .++.++.+|++|.+. +..+++
T Consensus 19 ~~~vlVtGatG~iG~~l~~~L~~~G----~~V~~~~r~~~~-----------~~~~~~~~Dl~d~~~-~~~~~~------ 76 (347)
T 4id9_A 19 SHMILVTGSAGRVGRAVVAALRTQG----RTVRGFDLRPSG-----------TGGEEVVGSLEDGQA-LSDAIM------ 76 (347)
T ss_dssp --CEEEETTTSHHHHHHHHHHHHTT----CCEEEEESSCCS-----------SCCSEEESCTTCHHH-HHHHHT------
T ss_pred CCEEEEECCCChHHHHHHHHHHhCC----CEEEEEeCCCCC-----------CCccEEecCcCCHHH-HHHHHh------
Confidence 3689999999999999999999999 899999998754 578899999999877 555432
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
++|+|||+|+.... +.+.++..+++|+.++.++++++.+. +.++||++||...+.
T Consensus 77 ---~~d~vih~A~~~~~-------~~~~~~~~~~~nv~~~~~ll~a~~~~---------------~~~~~V~~SS~~vyg 131 (347)
T 4id9_A 77 ---GVSAVLHLGAFMSW-------APADRDRMFAVNVEGTRRLLDAASAA---------------GVRRFVFASSGEVYP 131 (347)
T ss_dssp ---TCSEEEECCCCCCS-------SGGGHHHHHHHHTHHHHHHHHHHHHT---------------TCSEEEEEEEGGGTT
T ss_pred ---CCCEEEECCcccCc-------chhhHHHHHHHHHHHHHHHHHHHHHc---------------CCCeEEEECCHHHhC
Confidence 39999999986543 44556889999999999998887542 456899999965432
Q ss_pred cc----------cCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCccee
Q psy11190 161 ED----------NTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVK 205 (248)
Q Consensus 161 ~~----------~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~ 205 (248)
.. .+..+...|+.+|.+.+.+++.++.+ .+++++.+.|+++.
T Consensus 132 ~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~ 183 (347)
T 4id9_A 132 ENRPEFLPVTEDHPLCPNSPYGLTKLLGEELVRFHQRS---GAMETVILRFSHTQ 183 (347)
T ss_dssp TTSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHH---SSSEEEEEEECEEE
T ss_pred CCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHHHHHh---cCCceEEEccceEe
Confidence 20 12235567999999999999999877 37999999999887
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.6e-19 Score=156.46 Aligned_cols=201 Identities=18% Similarity=0.181 Sum_probs=148.9
Q ss_pred CceEEEecCCCchhHHHHHHHHhC-CCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeecc-CCchhhhhHHHHhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGL-GNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVT-DFSKQQDVLFKDISD 78 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~-g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~v~~~~~~i~~ 78 (248)
||++|||||+|.||++++++|+++ | ++|++++|+.++...+. ...++.++.+|++ |.+. +..+++
T Consensus 24 ~~~vlVtGatG~iG~~l~~~L~~~~g----~~V~~~~r~~~~~~~~~----~~~~v~~~~~Dl~~d~~~-~~~~~~---- 90 (372)
T 3slg_A 24 AKKVLILGVNGFIGHHLSKRILETTD----WEVFGMDMQTDRLGDLV----KHERMHFFEGDITINKEW-VEYHVK---- 90 (372)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHHSS----CEEEEEESCCTTTGGGG----GSTTEEEEECCTTTCHHH-HHHHHH----
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCC----CEEEEEeCChhhhhhhc----cCCCeEEEeCccCCCHHH-HHHHhc----
Confidence 578999999999999999999998 8 89999999976644321 2358899999999 7766 555543
Q ss_pred hhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 79 VVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
+ +|+|||+|+...+ . ...++.+..+++|+.++.++++++... + .++|++||...
T Consensus 91 --~---~d~Vih~A~~~~~-~----~~~~~~~~~~~~nv~~~~~ll~a~~~~---------------~-~~~v~~SS~~v 144 (372)
T 3slg_A 91 --K---CDVILPLVAIATP-A----TYVKQPLRVFELDFEANLPIVRSAVKY---------------G-KHLVFPSTSEV 144 (372)
T ss_dssp --H---CSEEEECBCCCCH-H----HHHHCHHHHHHHHTTTTHHHHHHHHHH---------------T-CEEEEECCGGG
T ss_pred --c---CCEEEEcCccccH-H----HHhhCHHHHHHHHHHHHHHHHHHHHHh---------------C-CcEEEeCcHHH
Confidence 2 9999999997654 1 123456677889999999888876543 4 78999999654
Q ss_pred cccccCC---------------CCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC-----------
Q psy11190 159 SIEDNTQ---------------GGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN----------- 212 (248)
Q Consensus 159 ~~~~~~~---------------~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~----------- 212 (248)
+...... .+...|+.+|.+.+.+++.++.+ |++++.+.|+.+..|.....
T Consensus 145 yg~~~~~~~~e~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~----g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~ 220 (372)
T 3slg_A 145 YGMCADEQFDPDASALTYGPINKPRWIYACSKQLMDRVIWGYGME----GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVV 220 (372)
T ss_dssp GBSCCCSSBCTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHTT----TCEEEEEEECSEECSSCCCTTCSBSCSCHHH
T ss_pred hCCCCCCCCCccccccccCCCCCCCCcHHHHHHHHHHHHHHHHHC----CCCEEEEccccccCCCcccccccccccchHH
Confidence 3221000 12336999999999999998865 79999999999987764310
Q ss_pred -----------------------CCCchhhHHHHHHHHhhhcccccccceeeeCC
Q psy11190 213 -----------------------APLEVGAATAGIIQFIQSLGEAHNGGFFEYTG 244 (248)
Q Consensus 213 -----------------------~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g 244 (248)
....++++++.++..+........|..|...+
T Consensus 221 ~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~ 275 (372)
T 3slg_A 221 TQFLGHIVRGENISLVDGGSQKRAFTYVDDGISALMKIIENSNGVATGKIYNIGN 275 (372)
T ss_dssp HHHHHHHHHTCCEEEGGGGCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECC
T ss_pred HHHHHHHHcCCCcEEeCCCceEEEEEEHHHHHHHHHHHHhcccCcCCCceEEeCC
Confidence 02357899999999887754434566666554
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=2.3e-20 Score=158.03 Aligned_cols=168 Identities=17% Similarity=0.120 Sum_probs=127.2
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
+++|||||+|+||++++++|+++| ++|++++|......+ ....++.++++|++|.++ +.+++++ .
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G----~~V~~~~r~~~~~~~-----~~~~~~~~~~~Dl~~~~~-~~~~~~~----~- 65 (311)
T 2p5y_A 1 MRVLVTGGAGFIGSHIVEDLLARG----LEVAVLDNLATGKRE-----NVPKGVPFFRVDLRDKEG-VERAFRE----F- 65 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTT----CEEEEECCCSSCCGG-----GSCTTCCEECCCTTCHHH-HHHHHHH----H-
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCC----CEEEEEECCCcCchh-----hcccCeEEEECCCCCHHH-HHHHHHh----c-
Confidence 259999999999999999999999 899999985432111 011367788999999888 7766553 2
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+|||+|+.... ..+.++++..+++|+.+++++++++.+. +.++||++||..+.++
T Consensus 66 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~~N~~g~~~l~~a~~~~---------------~~~~iv~~SS~~~~~g 123 (311)
T 2p5y_A 66 --RPTHVSHQAAQASV-----KVSVEDPVLDFEVNLLGGLNLLEACRQY---------------GVEKLVFASTGGAIYG 123 (311)
T ss_dssp --CCSEEEECCSCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHHT---------------TCSEEEEEEEHHHHHC
T ss_pred --CCCEEEECccccCc-----hhhhhCHHHHHHHHHHHHHHHHHHHHHh---------------CCCEEEEeCCChhhcC
Confidence 39999999986532 1244667888999999999999887532 3568999999722221
Q ss_pred c----------cCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCC
Q psy11190 162 D----------NTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMG 209 (248)
Q Consensus 162 ~----------~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~ 209 (248)
. .+..+...|+.+|++++.+++.++.++ |++++.+.||.+.+|..
T Consensus 124 ~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~Gp~~ 178 (311)
T 2p5y_A 124 EVPEGERAEETWPPRPKSPYAASKAAFEHYLSVYGQSY---GLKWVSLRYGNVYGPRQ 178 (311)
T ss_dssp CCCTTCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTC
T ss_pred CCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHHHHHHc---CCCEEEEeeccccCcCC
Confidence 1 011245689999999999999998774 79999999999988763
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=3e-19 Score=155.39 Aligned_cols=203 Identities=17% Similarity=0.035 Sum_probs=141.8
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchh-----HHHHH-HHHhhcC-CceeEEeeccCCchhhhhHHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDK-----AVELL-ALAQQHS-NLHVIELDVTDFSKQQDVLFK 74 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~-----~~~~~-~~~~~~~-~~~~~~~D~~~~~~~v~~~~~ 74 (248)
|++|||||+|+||++++++|+++| +.|++++|+.++ ++.+. ....... ++.++.+|++|.++ +..+++
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~-~~~~~~ 103 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKG----YEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASS-LRRWID 103 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT----CEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHH-HHHHHH
T ss_pred CeEEEEcCCchHHHHHHHHHHHCC----CEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHH-HHHHHH
Confidence 799999999999999999999999 899999998654 22221 1111123 68889999999888 777765
Q ss_pred HhhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEee
Q psy11190 75 DISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVS 154 (248)
Q Consensus 75 ~i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vs 154 (248)
.+ ++|+|||+||.... ..+.++++..+++|+.++.++++++.+...+++ +.++||++|
T Consensus 104 ~~-------~~d~Vih~A~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~----------~~~~~v~~S 161 (381)
T 1n7h_A 104 VI-------KPDEVYNLAAQSHV-----AVSFEIPDYTADVVATGALRLLEAVRSHTIDSG----------RTVKYYQAG 161 (381)
T ss_dssp HH-------CCSEEEECCSCCCH-----HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHC----------CCCEEEEEE
T ss_pred hc-------CCCEEEECCcccCc-----cccccCHHHHHHHHHHHHHHHHHHHHHhCCccC----------CccEEEEeC
Confidence 54 28999999997543 123567788899999999999999998765431 356999999
Q ss_pred cCCCcccc-------cCCCCCccchhhHHHHHHHHHHHHhhccCC---CeEEEEecCcceecCC-------------CC-
Q psy11190 155 SIMGSIED-------NTQGGFHPYRCSKAALNAATRSLSIDLKGD---KIIATAMHPGWVKTDM-------------GG- 210 (248)
Q Consensus 155 s~~~~~~~-------~~~~~~~~y~~sK~a~~~~~~~la~e~~~~---~i~v~~v~PG~v~t~~-------------~~- 210 (248)
|...+... .+..+...|+.+|.+.+.+++.++.++.-. ...++.+.||...+.+ ..
T Consensus 162 S~~vyg~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~ 241 (381)
T 1n7h_A 162 SSEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQ 241 (381)
T ss_dssp EGGGGTTSCSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSC
T ss_pred cHHHhCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCC
Confidence 97754321 012446789999999999999998775321 1223444555322110 00
Q ss_pred C----------CCCCchhhHHHHHHHHhhhc
Q psy11190 211 S----------NAPLEVGAATAGIIQFIQSL 231 (248)
Q Consensus 211 ~----------~~~~~~~~~~~~~~~~~~~~ 231 (248)
. .....++++++.++.++...
T Consensus 242 ~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~ 272 (381)
T 1n7h_A 242 TKLFLGNLQASRDWGFAGDYVEAMWLMLQQE 272 (381)
T ss_dssp CCEEESCTTCEEECEEHHHHHHHHHHHHTSS
T ss_pred CeEEeCCCCceeeeEEHHHHHHHHHHHHhCC
Confidence 0 01356899999999888763
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.81 E-value=7.6e-21 Score=152.37 Aligned_cols=171 Identities=15% Similarity=0.112 Sum_probs=133.1
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCc--eEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPA--HIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|+++||||+|+||++++++|+++| . +|++++|+.++ ...++.++.+|++|.++ +.+++
T Consensus 6 ~~vlVtGatG~iG~~l~~~l~~~g----~~~~V~~~~r~~~~---------~~~~~~~~~~D~~~~~~-~~~~~------ 65 (215)
T 2a35_A 6 KRVLLAGATGLTGEHLLDRILSEP----TLAKVIAPARKALA---------EHPRLDNPVGPLAELLP-QLDGS------ 65 (215)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHCT----TCCEEECCBSSCCC---------CCTTEECCBSCHHHHGG-GCCSC------
T ss_pred ceEEEECCCcHHHHHHHHHHHhCC----CCCeEEEEeCCCcc---------cCCCceEEeccccCHHH-HHHhh------
Confidence 589999999999999999999999 6 99999998765 13467888999998776 44432
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
+|+|||+||.... +.++++..+++|+.++.++++.+.+. +.+++|++||....
T Consensus 66 -----~d~vi~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---------------~~~~~v~~Ss~~~~ 118 (215)
T 2a35_A 66 -----IDTAFCCLGTTIK-------EAGSEEAFRAVDFDLPLAVGKRALEM---------------GARHYLVVSALGAD 118 (215)
T ss_dssp -----CSEEEECCCCCHH-------HHSSHHHHHHHHTHHHHHHHHHHHHT---------------TCCEEEEECCTTCC
T ss_pred -----hcEEEECeeeccc-------cCCCHHHHHHhhHHHHHHHHHHHHHc---------------CCCEEEEECCcccC
Confidence 7999999996532 24567778889999999988886542 45689999998765
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeE-EEEecCcceecCCCCC---------CC--------CCchhhHH
Q psy11190 160 IEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKII-ATAMHPGWVKTDMGGS---------NA--------PLEVGAAT 221 (248)
Q Consensus 160 ~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~-v~~v~PG~v~t~~~~~---------~~--------~~~~~~~~ 221 (248)
. .+...|+.+|.+++.+++. .|++ ++.+.||++.++.... .. ...+++++
T Consensus 119 ~-----~~~~~y~~sK~~~e~~~~~-------~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva 186 (215)
T 2a35_A 119 A-----KSSIFYNRVKGELEQALQE-------QGWPQLTIARPSLLFGPREEFRLAEILAAPIARILPGKYHGIEACDLA 186 (215)
T ss_dssp T-----TCSSHHHHHHHHHHHHHTT-------SCCSEEEEEECCSEESTTSCEEGGGGTTCCCC----CHHHHHHHHHHH
T ss_pred C-----CCccHHHHHHHHHHHHHHH-------cCCCeEEEEeCceeeCCCCcchHHHHHHHhhhhccCCCcCcEeHHHHH
Confidence 3 2356899999999988764 2788 9999999999875321 00 13568888
Q ss_pred HHHHHHhhhc
Q psy11190 222 AGIIQFIQSL 231 (248)
Q Consensus 222 ~~~~~~~~~~ 231 (248)
+.++..+..+
T Consensus 187 ~~~~~~~~~~ 196 (215)
T 2a35_A 187 RALWRLALEE 196 (215)
T ss_dssp HHHHHHHTCC
T ss_pred HHHHHHHhcC
Confidence 8888888764
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.81 E-value=2e-19 Score=153.60 Aligned_cols=171 Identities=13% Similarity=-0.013 Sum_probs=126.4
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhH--HHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKA--VELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
++++|||||+|+||++++++|+++| ++|++++|+.+.. ..+.. .....++.++.+|++|.++ +..+++.+
T Consensus 14 ~~~vlVTGatG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~-~~~~~~~~-- 85 (335)
T 1rpn_A 14 TRSALVTGITGQDGAYLAKLLLEKG----YRVHGLVARRSSDTRWRLRE-LGIEGDIQYEDGDMADACS-VQRAVIKA-- 85 (335)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTT----CEEEEEECCCSSCCCHHHHH-TTCGGGEEEEECCTTCHHH-HHHHHHHH--
T ss_pred CCeEEEECCCChHHHHHHHHHHHCC----CeEEEEeCCCccccccchhh-ccccCceEEEECCCCCHHH-HHHHHHHc--
Confidence 4689999999999999999999999 8999999987542 11211 1123467889999999888 77766554
Q ss_pred hhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCC-CceEEEeecCC
Q psy11190 79 VVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSS-RAAIVNVSSIM 157 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~-~~~iv~vss~~ 157 (248)
++|+|||+||.... ..+.++++..+++|+.++.++++++.+. + .+++|++||..
T Consensus 86 -----~~d~Vih~A~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~a~~~~---------------~~~~~~v~~SS~~ 140 (335)
T 1rpn_A 86 -----QPQEVYNLAAQSFV-----GASWNQPVTTGVVDGLGVTHLLEAIRQF---------------SPETRFYQASTSE 140 (335)
T ss_dssp -----CCSEEEECCSCCCH-----HHHTTSHHHHHHHHTHHHHHHHHHHHHH---------------CTTSEEEEEEEGG
T ss_pred -----CCCEEEECccccch-----hhhhhChHHHHHHHHHHHHHHHHHHHHh---------------CCCCeEEEEeCHH
Confidence 28999999996532 1123456788899999999999887553 3 37899999976
Q ss_pred Cccccc--------CCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecC
Q psy11190 158 GSIEDN--------TQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTD 207 (248)
Q Consensus 158 ~~~~~~--------~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~ 207 (248)
.+.... +..+...|+.+|.+.+.+++.++.++ ++++..+.|+.+..|
T Consensus 141 v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~v~Gp 195 (335)
T 1rpn_A 141 MFGLIQAERQDENTPFYPRSPYGVAKLYGHWITVNYRESF---GLHASSGILFNHESP 195 (335)
T ss_dssp GGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECT
T ss_pred HhCCCCCCCCCcccCCCCCChhHHHHHHHHHHHHHHHHHc---CCcEEEEeeCcccCC
Confidence 543221 11234579999999999999998764 567777777766554
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=1.4e-19 Score=157.62 Aligned_cols=189 Identities=12% Similarity=0.023 Sum_probs=142.7
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
||++|||||+|+||++++++|+++| ++|++++|+.++.... ...++.++.+|++|.++ +..+++
T Consensus 29 ~~~vlVtGatG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~-----~~~~v~~~~~Dl~d~~~-~~~~~~------ 92 (379)
T 2c5a_A 29 NLKISITGAGGFIASHIARRLKHEG----HYVIASDWKKNEHMTE-----DMFCDEFHLVDLRVMEN-CLKVTE------ 92 (379)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT----CEEEEEESSCCSSSCG-----GGTCSEEEECCTTSHHH-HHHHHT------
T ss_pred CCeEEEECCccHHHHHHHHHHHHCC----CeEEEEECCCccchhh-----ccCCceEEECCCCCHHH-HHHHhC------
Confidence 6789999999999999999999999 8999999987653211 13468899999999877 555532
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
++|+|||+|+.... ..+ +.++++..+++|+.++.++++++.+. +.++||++||...+.
T Consensus 93 ---~~d~Vih~A~~~~~-~~~---~~~~~~~~~~~Nv~g~~~ll~a~~~~---------------~~~~~V~~SS~~v~~ 150 (379)
T 2c5a_A 93 ---GVDHVFNLAADMGG-MGF---IQSNHSVIMYNNTMISFNMIEAARIN---------------GIKRFFYASSACIYP 150 (379)
T ss_dssp ---TCSEEEECCCCCCC-HHH---HTTCHHHHHHHHHHHHHHHHHHHHHT---------------TCSEEEEEEEGGGSC
T ss_pred ---CCCEEEECceecCc-ccc---cccCHHHHHHHHHHHHHHHHHHHHHc---------------CCCEEEEEeehheeC
Confidence 39999999997532 111 13457788889999999999887542 356899999976543
Q ss_pred ccc---------------CCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC-------------
Q psy11190 161 EDN---------------TQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN------------- 212 (248)
Q Consensus 161 ~~~---------------~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~------------- 212 (248)
... +..+...|+.+|.+.+.+++.++.+. |++++.+.||++.++.....
T Consensus 151 ~~~~~~~~~~~~~E~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~ 227 (379)
T 2c5a_A 151 EFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDF---GIECRIGRFHNIYGPFGTWKGGREKAPAAFCRK 227 (379)
T ss_dssp GGGSSSSSSCEECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCCSSSCCCHHHHHHHH
T ss_pred CCCCCCccCCCcCcccCCCCCCCChhHHHHHHHHHHHHHHHHHH---CCCEEEEEeCceeCcCCCcccccccHHHHHHHH
Confidence 210 22345689999999999999998764 79999999999988753210
Q ss_pred ------------------CCCchhhHHHHHHHHhhh
Q psy11190 213 ------------------APLEVGAATAGIIQFIQS 230 (248)
Q Consensus 213 ------------------~~~~~~~~~~~~~~~~~~ 230 (248)
....++++++.++..+..
T Consensus 228 ~~~~~~~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~ 263 (379)
T 2c5a_A 228 AQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKS 263 (379)
T ss_dssp HHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHHHS
T ss_pred HHhCCCceEEeCCCCeeEEEEEHHHHHHHHHHHhhc
Confidence 023478888888888765
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=99.81 E-value=4e-19 Score=150.55 Aligned_cols=194 Identities=16% Similarity=0.136 Sum_probs=115.4
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||+|+||++++++|+++| ++|++++|+.+. ++ ++.+|++|.++ +..+++..
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g----~~V~~~~r~~~~-----------~~--~~~~Dl~d~~~-~~~~~~~~----- 59 (315)
T 2ydy_A 3 RRVLVTGATGLLGRAVHKEFQQNN----WHAVGCGFRRAR-----------PK--FEQVNLLDSNA-VHHIIHDF----- 59 (315)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTT----CEEEEEC--------------------------------CHHHHHHH-----
T ss_pred CeEEEECCCcHHHHHHHHHHHhCC----CeEEEEccCCCC-----------CC--eEEecCCCHHH-HHHHHHhh-----
Confidence 689999999999999999999999 999999987543 12 67899999888 77766554
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+|||+||.... ..+.++++..+++|+.++.++++++.+. + +++|++||...+.+
T Consensus 60 --~~d~vih~A~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~a~~~~---------------~-~~~v~~SS~~v~~~ 116 (315)
T 2ydy_A 60 --QPHVIVHCAAERRP-----DVVENQPDAASQLNVDASGNLAKEAAAV---------------G-AFLIYISSDYVFDG 116 (315)
T ss_dssp --CCSEEEECC------------------------CHHHHHHHHHHHHH---------------T-CEEEEEEEGGGSCS
T ss_pred --CCCEEEECCcccCh-----hhhhcCHHHHHHHHHHHHHHHHHHHHHc---------------C-CeEEEEchHHHcCC
Confidence 29999999997543 2245678889999999999999988752 3 48999999876543
Q ss_pred c-------cCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceec---CCC---------CCC----------
Q psy11190 162 D-------NTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKT---DMG---------GSN---------- 212 (248)
Q Consensus 162 ~-------~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t---~~~---------~~~---------- 212 (248)
. .+..+...|+.+|.+.+.+++.++.++ ..+|++.|+ |+.++ .+. ...
T Consensus 117 ~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~lR~~~v~-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (315)
T 2ydy_A 117 TNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGA--AVLRIPILY-GEVEKLEESAVTVMFDKVQFSNKSANMDHWQQR 193 (315)
T ss_dssp SSCSBCTTSCCCCCSHHHHHHHHHHHHHHHHCTTC--EEEEECSEE-CSCSSGGGSTTGGGHHHHHCCSSCEEEECSSBB
T ss_pred CCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCe--EEEeeeeee-CCCCcccccHHHHHHHHHHhcCCCeeeccCceE
Confidence 1 011345689999999999999987554 357777776 55544 211 010
Q ss_pred CCCchhhHHHHHHHHhhhc-ccccccceeeeCC
Q psy11190 213 APLEVGAATAGIIQFIQSL-GEAHNGGFFEYTG 244 (248)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~g 244 (248)
....++++++.++.++... .....+..|...+
T Consensus 194 ~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~i~~ 226 (315)
T 2ydy_A 194 FPTHVKDVATVCRQLAEKRMLDPSIKGTFHWSG 226 (315)
T ss_dssp CCEEHHHHHHHHHHHHHHHHTCTTCCEEEECCC
T ss_pred CcEEHHHHHHHHHHHHHhhccccCCCCeEEEcC
Confidence 1346899999999888763 1123445555443
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.7e-19 Score=154.34 Aligned_cols=194 Identities=15% Similarity=0.136 Sum_probs=136.1
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
||++|||||+|+||++++++|+++| ++|++++|+.....+. .....++.++.+|++|.++ +..+++.
T Consensus 21 ~~~vlVTGatG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~---l~~~~~~~~~~~Dl~d~~~-~~~~~~~----- 87 (333)
T 2q1w_A 21 MKKVFITGICGQIGSHIAELLLERG----DKVVGIDNFATGRREH---LKDHPNLTFVEGSIADHAL-VNQLIGD----- 87 (333)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT----CEEEEEECCSSCCGGG---SCCCTTEEEEECCTTCHHH-HHHHHHH-----
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCC----CEEEEEECCCccchhh---HhhcCCceEEEEeCCCHHH-HHHHHhc-----
Confidence 6789999999999999999999999 9999999986432111 0011467889999999888 7776654
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+ ++|+|||+||.... . +.++++ +++|+.++.++++++.+. +.++||++||...+.
T Consensus 88 ~--~~D~vih~A~~~~~-~-----~~~~~~--~~~N~~~~~~l~~a~~~~---------------~~~~iV~~SS~~~~g 142 (333)
T 2q1w_A 88 L--QPDAVVHTAASYKD-P-----DDWYND--TLTNCVGGSNVVQAAKKN---------------NVGRFVYFQTALCYG 142 (333)
T ss_dssp H--CCSEEEECCCCCSC-T-----TCHHHH--HHHHTHHHHHHHHHHHHT---------------TCSEEEEEEEGGGGC
T ss_pred c--CCcEEEECceecCC-C-----ccCChH--HHHHHHHHHHHHHHHHHh---------------CCCEEEEECcHHHhC
Confidence 1 39999999997543 1 334444 899999999999988662 457899999976543
Q ss_pred ----cccC-C----CCC-ccchhhHHHHHHHHHH-HHhhccCCCeEEEEecCcceecCCC--------------C-C---
Q psy11190 161 ----EDNT-Q----GGF-HPYRCSKAALNAATRS-LSIDLKGDKIIATAMHPGWVKTDMG--------------G-S--- 211 (248)
Q Consensus 161 ----~~~~-~----~~~-~~y~~sK~a~~~~~~~-la~e~~~~~i~v~~v~PG~v~t~~~--------------~-~--- 211 (248)
.... . .+. ..|+.+|++.+.+++. ++ ++..+.|+.+..|.. . .
T Consensus 143 ~~~~~~~~~~~E~~~p~~~~Y~~sK~~~E~~~~~s~~--------~~~ilR~~~v~gp~~~~~~~~~~~~~~~~~~~~~~ 214 (333)
T 2q1w_A 143 VKPIQQPVRLDHPRNPANSSYAISKSANEDYLEYSGL--------DFVTFRLANVVGPRNVSGPLPIFFQRLSEGKKCFV 214 (333)
T ss_dssp SCCCSSSBCTTSCCCCTTCHHHHHHHHHHHHHHHHTC--------CEEEEEESEEESTTCCSSHHHHHHHHHHTTCCCEE
T ss_pred CCcccCCCCcCCCCCCCCCchHHHHHHHHHHHHhhhC--------CeEEEeeceEECcCCcCcHHHHHHHHHHcCCeeeC
Confidence 1100 0 123 7899999999999988 66 334455544433320 0 0
Q ss_pred ----CCCCchhhHHHHHHHHhhhcccccccceeeeCC
Q psy11190 212 ----NAPLEVGAATAGIIQFIQSLGEAHNGGFFEYTG 244 (248)
Q Consensus 212 ----~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g 244 (248)
.....++++++.++.++.... |+.|...+
T Consensus 215 ~~~~~~~i~v~Dva~ai~~~~~~~~----g~~~~v~~ 247 (333)
T 2q1w_A 215 TKARRDFVFVKDLARATVRAVDGVG----HGAYHFSS 247 (333)
T ss_dssp EECEECEEEHHHHHHHHHHHHTTCC----CEEEECSC
T ss_pred CCceEeeEEHHHHHHHHHHHHhcCC----CCEEEeCC
Confidence 113468899999998887643 55555544
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.6e-19 Score=156.05 Aligned_cols=198 Identities=14% Similarity=0.038 Sum_probs=137.0
Q ss_pred CceEEEecCCCchhHHHHHHHHh--CCCCCCceEEEeecCchhHHHH-------HHH-HhhcCCceeEEeeccCCchhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVG--LGNNQPAHIFATCRNKDKAVEL-------LAL-AQQHSNLHVIELDVTDFSKQQD 70 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~--~g~~~~~~V~~~~r~~~~~~~~-------~~~-~~~~~~~~~~~~D~~~~~~~v~ 70 (248)
||++|||||+|+||++++++|++ +| ++|++++|+....... ... .....++.++.+|++|.++ ++
T Consensus 10 ~~~vlVTGatG~IG~~l~~~L~~~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~-~~ 84 (362)
T 3sxp_A 10 NQTILITGGAGFVGSNLAFHFQENHPK----AKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLD-LR 84 (362)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHCTT----SEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHH-HH
T ss_pred CCEEEEECCCCHHHHHHHHHHHhhCCC----CeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHH-HH
Confidence 36899999999999999999999 88 9999999976521110 000 1113467899999999887 55
Q ss_pred hHHHHhhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceE
Q psy11190 71 VLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAI 150 (248)
Q Consensus 71 ~~~~~i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~i 150 (248)
.+ ... ++|+|||+||.... +.++++..+++|+.++.++++.+.. .+++|
T Consensus 85 ~~------~~~--~~D~vih~A~~~~~-------~~~~~~~~~~~Nv~gt~~ll~aa~~----------------~~~~~ 133 (362)
T 3sxp_A 85 RL------EKL--HFDYLFHQAAVSDT-------TMLNQELVMKTNYQAFLNLLEIARS----------------KKAKV 133 (362)
T ss_dssp HH------TTS--CCSEEEECCCCCGG-------GCCCHHHHHHHHTHHHHHHHHHHHH----------------TTCEE
T ss_pred Hh------hcc--CCCEEEECCccCCc-------cccCHHHHHHHHHHHHHHHHHHHHH----------------cCCcE
Confidence 54 122 59999999996432 4467788999999999999988733 23459
Q ss_pred EEeecCCCccccc-------CCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC-----------
Q psy11190 151 VNVSSIMGSIEDN-------TQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN----------- 212 (248)
Q Consensus 151 v~vss~~~~~~~~-------~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~----------- 212 (248)
|++||...+.... +..+...|+.+|.+.+.+++.++.+ ++++.+.|+.+..|.....
T Consensus 134 V~~SS~~vyg~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~-----~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~ 208 (362)
T 3sxp_A 134 IYASSAGVYGNTKAPNVVGKNESPENVYGFSKLCMDEFVLSHSND-----NVQVGLRYFNVYGPREFYKEKTASMVLQLA 208 (362)
T ss_dssp EEEEEGGGGCSCCSSBCTTSCCCCSSHHHHHHHHHHHHHHHTTTT-----SCEEEEEECSEESTTCGGGGGGSCHHHHHH
T ss_pred EEeCcHHHhCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHhcc-----CCEEEEEeCceeCcCCCCCCcchhHHHHHH
Confidence 9999955432210 1123456999999999999999876 4555555555554432110
Q ss_pred -------------------CCCchhhHHHHHHHHhhhcccccccceeeeC
Q psy11190 213 -------------------APLEVGAATAGIIQFIQSLGEAHNGGFFEYT 243 (248)
Q Consensus 213 -------------------~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 243 (248)
....++++++.++.++... ..| .|...
T Consensus 209 ~~~~~~~~~~~~~~g~~~~~~i~v~Dva~ai~~~~~~~---~~g-~~~i~ 254 (362)
T 3sxp_A 209 LGAMAFKEVKLFEFGEQLRDFVYIEDVIQANVKAMKAQ---KSG-VYNVG 254 (362)
T ss_dssp HHHHTTSEEECSGGGCCEEECEEHHHHHHHHHHHTTCS---SCE-EEEES
T ss_pred HHHHhCCCeEEECCCCeEEccEEHHHHHHHHHHHHhcC---CCC-EEEeC
Confidence 0235899999999988763 245 55543
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=99.80 E-value=3.8e-19 Score=152.25 Aligned_cols=202 Identities=14% Similarity=0.112 Sum_probs=144.8
Q ss_pred ceEEEecCCCchhHHHHHHHHhC-CCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGL-GNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~-g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|++|||||+|+||++++++|+++ | ++|++++|+.++...+ ....++.++++|++|..+.++.+++
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g----~~V~~~~r~~~~~~~~----~~~~~~~~~~~D~~~~~~~~~~~~~------ 66 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDH----YEVYGLDIGSDAISRF----LNHPHFHFVEGDISIHSEWIEYHVK------ 66 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTT----CEEEEEESCCGGGGGG----TTCTTEEEEECCTTTCSHHHHHHHH------
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCC----CEEEEEeCCcchHHHh----hcCCCeEEEeccccCcHHHHHhhcc------
Confidence 36999999999999999999998 7 8999999987664332 1234788999999985431444432
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
++|+|||+||...+ .. ..++.+..+++|+.++.++++.+.+. + .++|++||...+.
T Consensus 67 ---~~d~vih~A~~~~~-~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---------------~-~~~v~~SS~~v~g 122 (345)
T 2bll_A 67 ---KCDVVLPLVAIATP-IE----YTRNPLRVFELDFEENLRIIRYCVKY---------------R-KRIIFPSTSEVYG 122 (345)
T ss_dssp ---HCSEEEECBCCCCH-HH----HHHSHHHHHHHHTHHHHHHHHHHHHT---------------T-CEEEEECCGGGGB
T ss_pred ---CCCEEEEcccccCc-cc----hhcCHHHHHHHHHHHHHHHHHHHHHh---------------C-CeEEEEecHHHcC
Confidence 28999999997543 11 13456678889999998888776442 4 7899999976532
Q ss_pred cccCC---------------CCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC-------------
Q psy11190 161 EDNTQ---------------GGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN------------- 212 (248)
Q Consensus 161 ~~~~~---------------~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~------------- 212 (248)
..... .+...|+.+|.+.+.+++.++.+. |++++.+.||.+..+.....
T Consensus 123 ~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~ 199 (345)
T 2bll_A 123 MCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQ 199 (345)
T ss_dssp TCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEECSSCCCTTCSBSCBCHHHHH
T ss_pred CCCCCCcCCcccccccCcccCcccccHHHHHHHHHHHHHHHHhc---CCCEEEEcCCcccCCCcccccccccccccHHHH
Confidence 21100 112279999999999999998764 79999999999987754210
Q ss_pred ---------------------CCCchhhHHHHHHHHhhhcccccccceeeeCC
Q psy11190 213 ---------------------APLEVGAATAGIIQFIQSLGEAHNGGFFEYTG 244 (248)
Q Consensus 213 ---------------------~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g 244 (248)
....++++++.++..+........|..|...+
T Consensus 200 ~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~g~~~~i~~ 252 (345)
T 2bll_A 200 LILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGN 252 (345)
T ss_dssp HHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECC
T ss_pred HHHHHHcCCCcEEECCCCEEEEEEEHHHHHHHHHHHHhhccccCCCceEEeCC
Confidence 02357789999988887643334566666554
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=99.80 E-value=1.9e-18 Score=146.28 Aligned_cols=189 Identities=15% Similarity=0.058 Sum_probs=139.1
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
||++|||||+|.||++++++|+++| +.|++++|+..... +. ++.++.+|++ .++ +..+++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~-~~-------~~~~~~~Dl~-~~~-~~~~~~------ 61 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDG----NTPIILTRSIGNKA-IN-------DYEYRVSDYT-LED-LINQLN------ 61 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT----CEEEEEESCCC-------------CCEEEECCCC-HHH-HHHHTT------
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCC----CEEEEEeCCCCccc-CC-------ceEEEEcccc-HHH-HHHhhc------
Confidence 4789999999999999999999999 89999999944322 21 7889999999 766 555432
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
++|+|||+|+.... . +.+..+++|+.++.++++++... +..++|++||...+.
T Consensus 62 ---~~d~Vih~a~~~~~-~--------~~~~~~~~n~~~~~~ll~a~~~~---------------~~~r~v~~SS~~vyg 114 (311)
T 3m2p_A 62 ---DVDAVVHLAATRGS-Q--------GKISEFHDNEILTQNLYDACYEN---------------NISNIVYASTISAYS 114 (311)
T ss_dssp ---TCSEEEECCCCCCS-S--------SCGGGTHHHHHHHHHHHHHHHHT---------------TCCEEEEEEEGGGCC
T ss_pred ---CCCEEEEccccCCC-C--------ChHHHHHHHHHHHHHHHHHHHHc---------------CCCEEEEEccHHHhC
Confidence 39999999997654 1 45567788999988888876442 456899999965543
Q ss_pred ccc--------CCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC-------------------
Q psy11190 161 EDN--------TQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA------------------- 213 (248)
Q Consensus 161 ~~~--------~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~------------------- 213 (248)
... +..+...|+.+|.+.+.+++.++.+ .|++++.+.|+.+..+......
T Consensus 115 ~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~g 191 (311)
T 3m2p_A 115 DETSLPWNEKELPLPDLMYGVSKLACEHIGNIYSRK---KGLCIKNLRFAHLYGFNEKNNYMINRFFRQAFHGEQLTLHA 191 (311)
T ss_dssp CGGGCSBCTTSCCCCSSHHHHHHHHHHHHHHHHHHH---SCCEEEEEEECEEECSCC--CCHHHHHHHHHHTCCCEEESS
T ss_pred CCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCceeCcCCCCCCHHHHHHHHHHcCCCeEEec
Confidence 221 1124568999999999999998875 4899999999999887644210
Q ss_pred -------CCchhhHHHHHHHHhhhcccccccceeee
Q psy11190 214 -------PLEVGAATAGIIQFIQSLGEAHNGGFFEY 242 (248)
Q Consensus 214 -------~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 242 (248)
....+++++.++..+.... .+..|..
T Consensus 192 ~~~~~~~~v~v~Dva~a~~~~~~~~~---~~~~~~i 224 (311)
T 3m2p_A 192 NSVAKREFLYAKDAAKSVIYALKQEK---VSGTFNI 224 (311)
T ss_dssp BCCCCEEEEEHHHHHHHHHHHTTCTT---CCEEEEE
T ss_pred CCCeEEceEEHHHHHHHHHHHHhcCC---CCCeEEe
Confidence 2346789999988887643 3444444
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=99.80 E-value=1.1e-19 Score=155.55 Aligned_cols=172 Identities=17% Similarity=0.157 Sum_probs=121.8
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHH---HHHHHHhhcCCceeEEeeccCCchhhhhHHHHhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAV---ELLALAQQHSNLHVIELDVTDFSKQQDVLFKDIS 77 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~---~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~ 77 (248)
+|++|||||+|+||++++++|+++| +.|+++.|+.++.. .+..+ ....++.++++|++|.++ +..+++
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~G----~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~-~~~~~~--- 79 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQKG----YAVNTTVRDPDNQKKVSHLLEL-QELGDLKIFRADLTDELS-FEAPIA--- 79 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHTT----CEEEEEESCTTCTTTTHHHHHH-GGGSCEEEEECCTTTSSS-SHHHHT---
T ss_pred CCEEEEECCchHHHHHHHHHHHHCC----CEEEEEEcCcchhhhHHHHHhc-CCCCcEEEEecCCCChHH-HHHHHc---
Confidence 3689999999999999999999999 89999999865432 22222 123578889999999887 555432
Q ss_pred hhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCC
Q psy11190 78 DVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIM 157 (248)
Q Consensus 78 ~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~ 157 (248)
++|+|||+|+.... . ..+..++.+++|+.+++++++++.+.. +.++||++||.+
T Consensus 80 ------~~D~Vih~A~~~~~----~--~~~~~~~~~~~nv~gt~~ll~aa~~~~--------------~v~r~V~~SS~~ 133 (338)
T 2rh8_A 80 ------GCDFVFHVATPVHF----A--SEDPENDMIKPAIQGVVNVMKACTRAK--------------SVKRVILTSSAA 133 (338)
T ss_dssp ------TCSEEEEESSCCCC---------------CHHHHHHHHHHHHHHHHCT--------------TCCEEEEECCHH
T ss_pred ------CCCEEEEeCCccCC----C--CCCcHHHHHHHHHHHHHHHHHHHHHcC--------------CcCEEEEEecHH
Confidence 38999999985421 1 112224588999999999999876531 146899999977
Q ss_pred CcccccCC------------------C---CCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCC
Q psy11190 158 GSIEDNTQ------------------G---GFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGG 210 (248)
Q Consensus 158 ~~~~~~~~------------------~---~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~ 210 (248)
+..+.... + ....|+.+|.+.+.+++.++.+ +|++++++.||.+.+|...
T Consensus 134 ~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~~lrp~~v~Gp~~~ 204 (338)
T 2rh8_A 134 AVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEE---NNIDLITVIPTLMAGSSLT 204 (338)
T ss_dssp HHHHHHHTCSCCCCCTTTTTCC-------CCCCCCTTSCCHHHHHHHHHHHH---HTCCEEEEEECEEESCCSS
T ss_pred HeecCCcCCCCcccChhhccchhhccccCCccchHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCceECCCCC
Confidence 43211000 0 1115999999999988877654 4799999999999998753
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=5.8e-19 Score=151.00 Aligned_cols=169 Identities=15% Similarity=0.104 Sum_probs=121.1
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhH-HHHHHHHh-hcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKA-VELLALAQ-QHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~-~~~~~~~~-~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
++|||||+|+||++++++|+++| +.|++++|..... +.+..+.. ...++.++.+|++|.++ +..+++..
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~G----~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-~~~~~~~~---- 72 (338)
T 1udb_A 2 RVLVTGGSGYIGSHTCVQLLQNG----HDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEAL-MTEILHDH---- 72 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT----CEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHH-HHHHHHHT----
T ss_pred EEEEECCCCHHHHHHHHHHHHCC----CEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHH-HHHHhhcc----
Confidence 69999999999999999999999 8999988753221 11111111 13468889999999887 77665541
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
++|+|||+||.... .. +.++.+..+++|+.++.++++.+. +. +.++||++||...+.
T Consensus 73 ---~~D~vih~A~~~~~-~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~-----------~~~~iv~~SS~~~~g 129 (338)
T 1udb_A 73 ---AIDTVIHFAGLKAV-GE----SVQKPLEYYDNNVNGTLRLISAMR----AA-----------NVKNFIFSSSATVYG 129 (338)
T ss_dssp ---TCSEEEECCSCCCH-HH----HHHCHHHHHHHHHHHHHHHHHHHH----HH-----------TCCEEEEEEEGGGGC
T ss_pred ---CCCEEEECCccCcc-cc----chhcHHHHHHHHHHHHHHHHHHHH----hc-----------CCCeEEEEccHHHhC
Confidence 39999999997532 11 234456778899999999887643 22 457899999976542
Q ss_pred cc--------cCC-CCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCccee
Q psy11190 161 ED--------NTQ-GGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVK 205 (248)
Q Consensus 161 ~~--------~~~-~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~ 205 (248)
.. .+. ++...|+.+|++++.+++.++.+. .++++..+.|+.+.
T Consensus 130 ~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~ 181 (338)
T 1udb_A 130 DNPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPV 181 (338)
T ss_dssp SCCSSSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHHS--TTCEEEEEEECEEE
T ss_pred CCCCCCcCcccCCCCCCChHHHHHHHHHHHHHHHHHhc--CCCceEEEeeceec
Confidence 11 011 236689999999999999999874 36888888775553
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=99.80 E-value=5.5e-19 Score=149.33 Aligned_cols=164 Identities=14% Similarity=0.016 Sum_probs=127.0
Q ss_pred ceEEEecCCCchhHHHHHHHHhC--CCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGL--GNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~--g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|++|||||+|+||++++++|+++ | ++|++++|+..... + . .++.++.+|++|.++ +..++++.
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~~~g----~~V~~~~r~~~~~~-~---~---~~~~~~~~D~~d~~~-~~~~~~~~--- 67 (312)
T 2yy7_A 3 PKILIIGACGQIGTELTQKLRKLYGT----ENVIASDIRKLNTD-V---V---NSGPFEVVNALDFNQ-IEHLVEVH--- 67 (312)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHHHCG----GGEEEEESCCCSCH-H---H---HSSCEEECCTTCHHH-HHHHHHHT---
T ss_pred ceEEEECCccHHHHHHHHHHHHhCCC----CEEEEEcCCCcccc-c---c---CCCceEEecCCCHHH-HHHHHhhc---
Confidence 57999999999999999999998 7 89999999876532 1 1 256789999999887 66665443
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
++|+|||+||.... . ..++.+..+++|+.++.++++++.+. +.+++|++||...+
T Consensus 68 ----~~d~vih~a~~~~~-~-----~~~~~~~~~~~n~~~~~~l~~~~~~~---------------~~~~~v~~SS~~~~ 122 (312)
T 2yy7_A 68 ----KITDIYLMAALLSA-T-----AEKNPAFAWDLNMNSLFHVLNLAKAK---------------KIKKIFWPSSIAVF 122 (312)
T ss_dssp ----TCCEEEECCCCCHH-H-----HHHCHHHHHHHHHHHHHHHHHHHHTT---------------SCSEEECCEEGGGC
T ss_pred ----CCCEEEECCccCCC-c-----hhhChHHHHHHHHHHHHHHHHHHHHc---------------CCCEEEEeccHHHh
Confidence 39999999997532 1 23556778889999999998887542 35689999998754
Q ss_pred cccc---------CCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCC
Q psy11190 160 IEDN---------TQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208 (248)
Q Consensus 160 ~~~~---------~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~ 208 (248)
.... +..+...|+.+|.+.+.+++.++.++ |++++.+.||.+..+.
T Consensus 123 ~~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~g~~ 177 (312)
T 2yy7_A 123 GPTTPKENTPQYTIMEPSTVYGISKQAGERWCEYYHNIY---GVDVRSIRYPGLISWS 177 (312)
T ss_dssp CTTSCSSSBCSSCBCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEECEEECEEECSS
T ss_pred CCCCCCCCccccCcCCCCchhHHHHHHHHHHHHHHHHhc---CCcEEEEeCCeEecCC
Confidence 3321 01235679999999999999988764 7999999999988753
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.78 E-value=3.4e-19 Score=152.64 Aligned_cols=201 Identities=15% Similarity=0.058 Sum_probs=142.0
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCC---CceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQ---PAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDIS 77 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~---~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~ 77 (248)
+|++|||||+|+||++++++|+++|... .++|++++|+.+.... ....++.++.+|++|.++ +..+++
T Consensus 14 ~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~-----~~~~~~~~~~~Dl~d~~~-~~~~~~--- 84 (342)
T 2hrz_A 14 GMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA-----GFSGAVDARAADLSAPGE-AEKLVE--- 84 (342)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT-----TCCSEEEEEECCTTSTTH-HHHHHH---
T ss_pred CCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc-----ccCCceeEEEcCCCCHHH-HHHHHh---
Confidence 3589999999999999999999988100 0379999998654221 123467889999999888 666543
Q ss_pred hhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCC
Q psy11190 78 DVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIM 157 (248)
Q Consensus 78 ~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~ 157 (248)
+ ++|+|||+||.... .+.++++..+++|+.++.++++++.+...+.. +.++||++||.+
T Consensus 85 ---~--~~d~vih~A~~~~~------~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~----------~~~~iv~~SS~~ 143 (342)
T 2hrz_A 85 ---A--RPDVIFHLAAIVSG------EAELDFDKGYRINLDGTRYLFDAIRIANGKDG----------YKPRVVFTSSIA 143 (342)
T ss_dssp ---T--CCSEEEECCCCCHH------HHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHC----------CCCEEEEEEEGG
T ss_pred ---c--CCCEEEECCccCcc------cccccHHHHHHHHHHHHHHHHHHHHhcccccC----------CCcEEEEeCchH
Confidence 1 49999999997532 23567888999999999999998876532210 147899999986
Q ss_pred CcccccC--------CCCCccchhhHHHHHHHHHHHHhhc--cCCCeEEEEec--CcceecCCC------------CC--
Q psy11190 158 GSIEDNT--------QGGFHPYRCSKAALNAATRSLSIDL--KGDKIIATAMH--PGWVKTDMG------------GS-- 211 (248)
Q Consensus 158 ~~~~~~~--------~~~~~~y~~sK~a~~~~~~~la~e~--~~~~i~v~~v~--PG~v~t~~~------------~~-- 211 (248)
.+....+ ..+...|+.+|++.+.+++.++.+. ....+|++.|+ ||.+.++.. ..
T Consensus 144 ~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~~ 223 (342)
T 2hrz_A 144 VFGAPLPYPIPDEFHTTPLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEA 223 (342)
T ss_dssp GCCSSCCSSBCTTCCCCCSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCCE
T ss_pred hhCCCCCCCcCCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCCe
Confidence 5433211 0146689999999999999988764 23357888887 887544310 00
Q ss_pred ---CC------CCchhhHHHHHHHHhhhc
Q psy11190 212 ---NA------PLEVGAATAGIIQFIQSL 231 (248)
Q Consensus 212 ---~~------~~~~~~~~~~~~~~~~~~ 231 (248)
.. ...++++++.++..+...
T Consensus 224 ~~~~~~~~~~~~~~v~Dva~~~~~~~~~~ 252 (342)
T 2hrz_A 224 VLPVPESIRHWHASPRSAVGFLIHGAMID 252 (342)
T ss_dssp EECSCTTCEEEEECHHHHHHHHHHHHHSC
T ss_pred eccCCCccceeeEehHHHHHHHHHHHhcc
Confidence 00 235788899988887653
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=1.6e-18 Score=149.43 Aligned_cols=197 Identities=14% Similarity=0.079 Sum_probs=140.9
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||+|+||++++++|+++|. +.|++++|+..... .. ....+. +.+|++|.+. ++.+++.. .++
T Consensus 47 ~~vlVtGatG~iG~~l~~~L~~~g~---~~V~~~~r~~~~~~-~~----~~~~~~-~~~d~~~~~~-~~~~~~~~--~~~ 114 (357)
T 2x6t_A 47 RMIIVTGGAGFIGSNIVKALNDKGI---TDILVVDNLKDGTK-FV----NLVDLN-IADYMDKEDF-LIQIMAGE--EFG 114 (357)
T ss_dssp -CEEEETTTSHHHHHHHHHHHHTTC---CCEEEEECCSSGGG-GG----GTTTSC-CSEEEEHHHH-HHHHHTTC--CCS
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCC---cEEEEEecCCCcch-hh----cccCce-EeeecCcHHH-HHHHHhhc--ccC
Confidence 5799999999999999999999884 68999998765421 10 111233 6789988777 66665431 123
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+|||+||.... +.++++..+++|+.++.++++++.+. +. ++|++||...+..
T Consensus 115 --~~d~Vih~A~~~~~-------~~~~~~~~~~~n~~~~~~ll~a~~~~---------------~~-r~V~~SS~~v~g~ 169 (357)
T 2x6t_A 115 --DVEAIFHEGACSST-------TEWDGKYMMDNNYQYSKELLHYCLER---------------EI-PFLYASSAATYGG 169 (357)
T ss_dssp --SCCEEEECCSCCCT-------TCCCHHHHHHHTHHHHHHHHHHHHHH---------------TC-CEEEEEEGGGGCS
T ss_pred --CCCEEEECCcccCC-------ccCCHHHHHHHHHHHHHHHHHHHHHc---------------CC-eEEEEcchHHhCC
Confidence 49999999997532 33457788899999999999988762 34 8999999875432
Q ss_pred ccC--------CCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC------------------C---
Q psy11190 162 DNT--------QGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS------------------N--- 212 (248)
Q Consensus 162 ~~~--------~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~------------------~--- 212 (248)
... ..+...|+.+|.+.+.+++.++.+ .|++++.+.||.+.+|.... .
T Consensus 170 ~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (357)
T 2x6t_A 170 RTSDFIESREYEKPLNVFGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPK 246 (357)
T ss_dssp CSSCCCSSGGGCCCSSHHHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCE
T ss_pred CCCCCcCCcCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcE
Confidence 210 013568999999999999999876 37999999999998775321 0
Q ss_pred ----------CCCchhhHHHHHHHHhhhcccccccceeee
Q psy11190 213 ----------APLEVGAATAGIIQFIQSLGEAHNGGFFEY 242 (248)
Q Consensus 213 ----------~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 242 (248)
....++++++.++..+.... +..|..
T Consensus 247 ~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~----~~~~~i 282 (357)
T 2x6t_A 247 LFEGSENFKRDFVYVGDVADVNLWFLENGV----SGIFNL 282 (357)
T ss_dssp EETTGGGCEECEEEHHHHHHHHHHHHHHCC----CEEEEE
T ss_pred EeCCCCcceEccEEHHHHHHHHHHHHhcCC----CCeEEe
Confidence 01356788888888887643 445544
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=1.3e-18 Score=151.35 Aligned_cols=171 Identities=13% Similarity=0.043 Sum_probs=125.5
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
||++|||||+|+||++++++|+++|. ++|++++|+.+...+. .....++.++.+|++|.++ +..+++
T Consensus 32 ~~~ilVtGatG~iG~~l~~~L~~~g~---~~V~~~~r~~~~~~~~---l~~~~~v~~~~~Dl~d~~~-l~~~~~------ 98 (377)
T 2q1s_A 32 NTNVMVVGGAGFVGSNLVKRLLELGV---NQVHVVDNLLSAEKIN---VPDHPAVRFSETSITDDAL-LASLQD------ 98 (377)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTC---SEEEEECCCTTCCGGG---SCCCTTEEEECSCTTCHHH-HHHCCS------
T ss_pred CCEEEEECCccHHHHHHHHHHHHcCC---ceEEEEECCCCCchhh---ccCCCceEEEECCCCCHHH-HHHHhh------
Confidence 46899999999999999999999883 6899999986542211 0013578899999999877 554432
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
++|+|||+||.... ..+.++++..+++|+.++.++++++.+. . +..++|++||...+.
T Consensus 99 ---~~d~Vih~A~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~~~---~-----------~~~~~V~~SS~~vyg 156 (377)
T 2q1s_A 99 ---EYDYVFHLATYHGN-----QSSIHDPLADHENNTLTTLKLYERLKHF---K-----------RLKKVVYSAAGCSIA 156 (377)
T ss_dssp ---CCSEEEECCCCSCH-----HHHHHCHHHHHHHHTHHHHHHHHHHTTC---S-----------SCCEEEEEEEC----
T ss_pred ---CCCEEEECCCccCc-----hhhhhCHHHHHHHHHHHHHHHHHHHHHh---C-----------CCCeEEEeCCHHHcC
Confidence 39999999997543 1234567788899999999998877431 0 235899999976432
Q ss_pred c-----cc--------CC-CCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCC
Q psy11190 161 E-----DN--------TQ-GGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMG 209 (248)
Q Consensus 161 ~-----~~--------~~-~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~ 209 (248)
. .. +. .+...|+.+|.+.+.+++.++.++ |++++.+.||.+.++..
T Consensus 157 ~~~~~~~~~~E~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRp~~v~G~~~ 216 (377)
T 2q1s_A 157 EKTFDDAKATEETDIVSLHNNDSPYSMSKIFGEFYSVYYHKQH---QLPTVRARFQNVYGPGE 216 (377)
T ss_dssp ----------CCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTC
T ss_pred CCCCCCcCcccccccccccCCCCchHHHHHHHHHHHHHHHHHh---CCCEEEEeeccEECCCC
Confidence 1 00 11 345679999999999999998764 79999999999988765
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=99.77 E-value=3.9e-18 Score=158.57 Aligned_cols=203 Identities=14% Similarity=0.112 Sum_probs=147.0
Q ss_pred CceEEEecCCCchhHHHHHHHHhC-CCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGL-GNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~-g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
||++|||||+|+||++++++|+++ | ++|++++|+.++...+ ....++.++.+|++|.++.+..+++
T Consensus 315 ~~~VLVTGatG~IG~~l~~~Ll~~~g----~~V~~~~r~~~~~~~~----~~~~~v~~v~~Dl~d~~~~~~~~~~----- 381 (660)
T 1z7e_A 315 RTRVLILGVNGFIGNHLTERLLREDH----YEVYGLDIGSDAISRF----LNHPHFHFVEGDISIHSEWIEYHVK----- 381 (660)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHSSS----EEEEEEESCCTTTGGG----TTCTTEEEEECCTTTCHHHHHHHHH-----
T ss_pred CceEEEEcCCcHHHHHHHHHHHhcCC----CEEEEEEcCchhhhhh----ccCCceEEEECCCCCcHHHHHHhhc-----
Confidence 468999999999999999999998 7 9999999987654322 1235788999999986541333321
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
++|+|||+||...+ . ...++.+..+++|+.++.++++++.+. + .++|++||...+
T Consensus 382 ----~~D~Vih~Aa~~~~-~----~~~~~~~~~~~~Nv~gt~~ll~aa~~~---------------~-~r~V~~SS~~vy 436 (660)
T 1z7e_A 382 ----KCDVVLPLVAIATP-I----EYTRNPLRVFELDFEENLRIIRYCVKY---------------R-KRIIFPSTSEVY 436 (660)
T ss_dssp ----HCSEEEECCCCCCT-H----HHHHSHHHHHHHHTHHHHHHHHHHHHT---------------T-CEEEEECCGGGG
T ss_pred ----CCCEEEECceecCc-c----ccccCHHHHHHhhhHHHHHHHHHHHHh---------------C-CEEEEEecHHHc
Confidence 28999999997543 1 123456778889999999888877542 4 789999997654
Q ss_pred ccccCC---------------CCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC--------C----
Q psy11190 160 IEDNTQ---------------GGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS--------N---- 212 (248)
Q Consensus 160 ~~~~~~---------------~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~--------~---- 212 (248)
...... .+...|+.+|.+.+.+++.++.+. |++++.+.||.+.++.... .
T Consensus 437 g~~~~~~~~E~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~ 513 (660)
T 1z7e_A 437 GMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNLNAARIGSSRAIT 513 (660)
T ss_dssp BTCCSSSBCTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEESTTSSCHHHHTTTCSCHHH
T ss_pred CCCCCcccCCCccccccCcccCCCCCcHHHHHHHHHHHHHHHHHc---CCCEEEECCCcccCCCccccccccccccchHH
Confidence 221100 122369999999999999998764 7999999999998876421 0
Q ss_pred ----------C------------CCchhhHHHHHHHHhhhcccccccceeeeCC
Q psy11190 213 ----------A------------PLEVGAATAGIIQFIQSLGEAHNGGFFEYTG 244 (248)
Q Consensus 213 ----------~------------~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g 244 (248)
. ...++++++.++..+........|..|...+
T Consensus 514 ~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~~~g~~~ni~~ 567 (660)
T 1z7e_A 514 QLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGN 567 (660)
T ss_dssp HHHHHHHHTCCEEEEGGGCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECC
T ss_pred HHHHHHHcCCCcEEeCCCCeEEEEEEHHHHHHHHHHHHhCccccCCCeEEEECC
Confidence 0 2347889999988887644334566776655
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=4.2e-18 Score=146.06 Aligned_cols=187 Identities=16% Similarity=0.025 Sum_probs=133.6
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
||++|||||+|+||++++++|+++| +.|++++|+........+......++.++.+|+.+...
T Consensus 27 ~~~vlVtGatG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~------------- 89 (343)
T 2b69_A 27 RKRILITGGAGFVGSHLTDKLMMDG----HEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLY------------- 89 (343)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT----CEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSCCC-------------
T ss_pred CCEEEEEcCccHHHHHHHHHHHHCC----CEEEEEeCCCccchhhhhhhccCCceEEEeCccCChhh-------------
Confidence 5789999999999999999999999 89999999754321111111123467888899877531
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
. ++|+|||+||.... ... .++.+..+++|+.++.++++++.+. + .++|++||...+.
T Consensus 90 ~--~~d~vih~A~~~~~-~~~----~~~~~~~~~~n~~~~~~l~~a~~~~---------------~-~~~v~~SS~~v~g 146 (343)
T 2b69_A 90 I--EVDQIYHLASPASP-PNY----MYNPIKTLKTNTIGTLNMLGLAKRV---------------G-ARLLLASTSEVYG 146 (343)
T ss_dssp C--CCSEEEECCSCCSH-HHH----TTCHHHHHHHHHHHHHHHHHHHHHH---------------T-CEEEEEEEGGGGB
T ss_pred c--CCCEEEECccccCc-hhh----hhCHHHHHHHHHHHHHHHHHHHHHh---------------C-CcEEEECcHHHhC
Confidence 2 49999999997543 111 2345667889999999998887542 2 4899999976432
Q ss_pred cc-------------cCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC---------------
Q psy11190 161 ED-------------NTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN--------------- 212 (248)
Q Consensus 161 ~~-------------~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~--------------- 212 (248)
.. .+..+...|+.+|.+.+.+++.++.+. |++++.+.||.+..|.....
T Consensus 147 ~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~ 223 (343)
T 2b69_A 147 DPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQE---GVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQG 223 (343)
T ss_dssp SCSSSSBCTTCCCBCCSSSTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHT
T ss_pred CCCCCCCcccccccCCCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcC
Confidence 11 111234569999999999999988764 79999999999988753210
Q ss_pred -------------CCCchhhHHHHHHHHhhh
Q psy11190 213 -------------APLEVGAATAGIIQFIQS 230 (248)
Q Consensus 213 -------------~~~~~~~~~~~~~~~~~~ 230 (248)
....++++++.++.++..
T Consensus 224 ~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~ 254 (343)
T 2b69_A 224 EPLTVYGSGSQTRAFQYVSDLVNGLVALMNS 254 (343)
T ss_dssp CCEEEESSSCCEEECEEHHHHHHHHHHHHTS
T ss_pred CCceEcCCCCeEEeeEeHHHHHHHHHHHHhc
Confidence 023578888888877754
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=6.3e-18 Score=143.21 Aligned_cols=197 Identities=12% Similarity=0.093 Sum_probs=140.7
Q ss_pred eEEEecCCCchhHHHHHHHHhC--CCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 3 SILITGCNRGLGLGMIKVLVGL--GNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~--g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
++|||||+|+||++++++|+++ | ++|++++|+..... .+.++.+|++|.++ +..+++..
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g----~~V~~~~r~~~~~~----------~~~~~~~D~~d~~~-~~~~~~~~---- 61 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGK----KNVIASDIVQRDTG----------GIKFITLDVSNRDE-IDRAVEKY---- 61 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCG----GGEEEEESSCCCCT----------TCCEEECCTTCHHH-HHHHHHHT----
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCC----CEEEEecCCCcccc----------CceEEEecCCCHHH-HHHHHhhc----
Confidence 4899999999999999999998 7 89999998765421 46788999999887 76665431
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
++|+|||+|+.... . ..++.+..+++|+.++.++++++.+. +.+++|++||...+.
T Consensus 62 ---~~d~vih~a~~~~~-~-----~~~~~~~~~~~n~~~~~~l~~a~~~~---------------~~~~~v~~SS~~~~~ 117 (317)
T 3ajr_A 62 ---SIDAIFHLAGILSA-K-----GEKDPALAYKVNMNGTYNILEAAKQH---------------RVEKVVIPSTIGVFG 117 (317)
T ss_dssp ---TCCEEEECCCCCHH-H-----HHHCHHHHHHHHHHHHHHHHHHHHHT---------------TCCEEEEEEEGGGCC
T ss_pred ---CCcEEEECCcccCC-c-----cccChHHHhhhhhHHHHHHHHHHHHc---------------CCCEEEEecCHHHhC
Confidence 39999999997532 1 23456778899999999999887542 356899999987654
Q ss_pred cccC---------CCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC------------------CC
Q psy11190 161 EDNT---------QGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS------------------NA 213 (248)
Q Consensus 161 ~~~~---------~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~------------------~~ 213 (248)
+..+ ..+...|+.+|.+.+.+++.++.+ .|++++.+.|+.+..+...+ ..
T Consensus 118 ~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (317)
T 3ajr_A 118 PETPKNKVPSITITRPRTMFGVTKIAAELLGQYYYEK---FGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREK 194 (317)
T ss_dssp TTSCSSSBCSSSCCCCCSHHHHHHHHHHHHHHHHHHH---HCCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCC
T ss_pred CCCCCCCccccccCCCCchHHHHHHHHHHHHHHHHHh---cCCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCC
Confidence 3210 124568999999999999988765 37999999865554321100 00
Q ss_pred ------------CCchhhHHHHHHHHhhhcccc-cccceeeeCCe
Q psy11190 214 ------------PLEVGAATAGIIQFIQSLGEA-HNGGFFEYTGK 245 (248)
Q Consensus 214 ------------~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~g~ 245 (248)
....+++++.++..+...... ..|..|...|.
T Consensus 195 ~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~~~~g~~~~i~~~ 239 (317)
T 3ajr_A 195 YKCYLAPNRALPMMYMPDALKALVDLYEADRDKLVLRNGYNVTAY 239 (317)
T ss_dssp EEECSCTTCCEEEEEHHHHHHHHHHHHHCCGGGCSSCSCEECCSE
T ss_pred ceeecCccceeeeeEHHHHHHHHHHHHhCCccccccCceEecCCc
Confidence 124688888888888664322 23455555543
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.76 E-value=1.5e-18 Score=145.18 Aligned_cols=172 Identities=19% Similarity=0.217 Sum_probs=130.0
Q ss_pred Cc-eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 1 MK-SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 1 ~k-~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|| ++|||||+|+||++++++|+++| ++|++++|. ++|++|.+. +..+++..
T Consensus 4 M~m~ilVtGatG~iG~~l~~~L~~~g----~~V~~~~r~--------------------~~D~~d~~~-~~~~~~~~--- 55 (287)
T 3sc6_A 4 MKERVIITGANGQLGKQLQEELNPEE----YDIYPFDKK--------------------LLDITNISQ-VQQVVQEI--- 55 (287)
T ss_dssp -CEEEEEESTTSHHHHHHHHHSCTTT----EEEEEECTT--------------------TSCTTCHHH-HHHHHHHH---
T ss_pred ceeEEEEECCCCHHHHHHHHHHHhCC----CEEEEeccc--------------------ccCCCCHHH-HHHHHHhc---
Confidence 67 89999999999999999999999 999999992 489998887 66665544
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
++|+|||+||.... . .+.++++..+++|+.++.++++.+.+. +.++|++||...+
T Consensus 56 ----~~d~vi~~a~~~~~-~----~~~~~~~~~~~~n~~~~~~l~~~~~~~----------------~~~~v~~SS~~vy 110 (287)
T 3sc6_A 56 ----RPHIIIHCAAYTKV-D----QAEKERDLAYVINAIGARNVAVASQLV----------------GAKLVYISTDYVF 110 (287)
T ss_dssp ----CCSEEEECCCCCCH-H----HHTTCHHHHHHHHTHHHHHHHHHHHHH----------------TCEEEEEEEGGGS
T ss_pred ----CCCEEEECCcccCh-H----HHhcCHHHHHHHHHHHHHHHHHHHHHc----------------CCeEEEEchhhhc
Confidence 29999999997643 1 123567788899999999999887543 3479999998654
Q ss_pred ccc--------cCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC-------------------
Q psy11190 160 IED--------NTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN------------------- 212 (248)
Q Consensus 160 ~~~--------~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~------------------- 212 (248)
.+. .+..+...|+.+|.+.+.+++.++. +++.+.|+.+..|.....
T Consensus 111 ~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~-------~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (287)
T 3sc6_A 111 QGDRPEGYDEFHNPAPINIYGASKYAGEQFVKELHN-------KYFIVRTSWLYGKYGNNFVKTMIRLGKEREEISVVAD 183 (287)
T ss_dssp CCCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHCS-------SEEEEEECSEECSSSCCHHHHHHHHHTTCSEEEEECS
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCC-------CcEEEeeeeecCCCCCcHHHHHHHHHHcCCCeEeecC
Confidence 322 1113456899999999999988764 347888998877643221
Q ss_pred ---CCCchhhHHHHHHHHhhhcc
Q psy11190 213 ---APLEVGAATAGIIQFIQSLG 232 (248)
Q Consensus 213 ---~~~~~~~~~~~~~~~~~~~~ 232 (248)
....++++++.++..+....
T Consensus 184 ~~~~~i~v~Dva~~~~~~~~~~~ 206 (287)
T 3sc6_A 184 QIGSPTYVADLNVMINKLIHTSL 206 (287)
T ss_dssp CEECCEEHHHHHHHHHHHHTSCC
T ss_pred cccCceEHHHHHHHHHHHHhCCC
Confidence 12348999999999887744
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.76 E-value=3.2e-18 Score=143.48 Aligned_cols=178 Identities=23% Similarity=0.268 Sum_probs=130.9
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||+|+||++++++|+++| ++|++++|+ ++|++|.++ +..+++.+
T Consensus 13 ~~vlVtGatG~iG~~l~~~L~~~g----~~V~~~~r~--------------------~~Dl~d~~~-~~~~~~~~----- 62 (292)
T 1vl0_A 13 MKILITGANGQLGREIQKQLKGKN----VEVIPTDVQ--------------------DLDITNVLA-VNKFFNEK----- 62 (292)
T ss_dssp EEEEEESTTSHHHHHHHHHHTTSS----EEEEEECTT--------------------TCCTTCHHH-HHHHHHHH-----
T ss_pred ceEEEECCCChHHHHHHHHHHhCC----CeEEeccCc--------------------cCCCCCHHH-HHHHHHhc-----
Confidence 589999999999999999999999 999999986 379998877 76665543
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+|||+||.... +.+.++++..+++|+.++.++++++.+. +. ++|++||.+.+.+
T Consensus 63 --~~d~vih~A~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~a~~~~---------------~~-~iv~~SS~~v~~~ 119 (292)
T 1vl0_A 63 --KPNVVINCAAHTAV-----DKCEEQYDLAYKINAIGPKNLAAAAYSV---------------GA-EIVQISTDYVFDG 119 (292)
T ss_dssp --CCSEEEECCCCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHHH---------------TC-EEEEEEEGGGSCS
T ss_pred --CCCEEEECCccCCH-----HHHhcCHHHHHHHHHHHHHHHHHHHHHc---------------CC-eEEEechHHeECC
Confidence 29999999997532 1234677888999999999999987662 33 8999999765433
Q ss_pred cc--------CCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC----------------------
Q psy11190 162 DN--------TQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS---------------------- 211 (248)
Q Consensus 162 ~~--------~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~---------------------- 211 (248)
.. +..+...|+.+|.+.+.+++.++.+ ++.+.|+.+..+ ...
T Consensus 120 ~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~-------~~~lR~~~v~G~-~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (292)
T 1vl0_A 120 EAKEPITEFDEVNPQSAYGKTKLEGENFVKALNPK-------YYIVRTAWLYGD-GNNFVKTMINLGKTHDELKVVHDQV 191 (292)
T ss_dssp CCSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHCSS-------EEEEEECSEESS-SSCHHHHHHHHHHHCSEEEEESSCE
T ss_pred CCCCCCCCCCCCCCccHHHHHHHHHHHHHHhhCCC-------eEEEeeeeeeCC-CcChHHHHHHHHhcCCcEEeecCee
Confidence 21 0123568999999999999887642 455666666543 111
Q ss_pred CCCCchhhHHHHHHHHhhhcccccccceeeeCC
Q psy11190 212 NAPLEVGAATAGIIQFIQSLGEAHNGGFFEYTG 244 (248)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g 244 (248)
.....++++++.++..+... .+..|...+
T Consensus 192 ~~~i~v~Dva~~~~~~~~~~----~~~~~~i~~ 220 (292)
T 1vl0_A 192 GTPTSTVDLARVVLKVIDEK----NYGTFHCTC 220 (292)
T ss_dssp ECCEEHHHHHHHHHHHHHHT----CCEEEECCC
T ss_pred eCCccHHHHHHHHHHHHhcC----CCcEEEecC
Confidence 11245889999999888763 344554443
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.75 E-value=3e-17 Score=147.17 Aligned_cols=169 Identities=17% Similarity=0.160 Sum_probs=123.3
Q ss_pred CceEEEecCCCchhHHHHHHHHhC---CCCCCceEEEeecCchhHHHHHHHHh----------------hcCCceeEEee
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGL---GNNQPAHIFATCRNKDKAVELLALAQ----------------QHSNLHVIELD 61 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~---g~~~~~~V~~~~r~~~~~~~~~~~~~----------------~~~~~~~~~~D 61 (248)
||++|||||+|+||++++++|+++ | ++|++++|+.+......++.. ...++.++.+|
T Consensus 73 ~~~VLVTGatG~IG~~l~~~Ll~~~~~g----~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~D 148 (478)
T 4dqv_A 73 LRTVLLTGATGFLGRYLVLELLRRLDVD----GRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGD 148 (478)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHHSCTT----CEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhcCCCC----CEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeE
Confidence 579999999999999999999999 7 899999998775443332211 13578999999
Q ss_pred ccCCc---hhhhhHHHHhhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcc
Q psy11190 62 VTDFS---KQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEAN 138 (248)
Q Consensus 62 ~~~~~---~~v~~~~~~i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ 138 (248)
+++.. + ...+ .+.+. ++|+|||+||.... +.++..+++|+.++.++++.+.+.
T Consensus 149 l~~~~~gld-~~~~----~~~~~--~~D~Vih~Aa~~~~---------~~~~~~~~~Nv~gt~~ll~aa~~~-------- 204 (478)
T 4dqv_A 149 KSEPDLGLD-QPMW----RRLAE--TVDLIVDSAAMVNA---------FPYHELFGPNVAGTAELIRIALTT-------- 204 (478)
T ss_dssp TTSGGGGCC-HHHH----HHHHH--HCCEEEECCSSCSB---------SSCCEEHHHHHHHHHHHHHHHTSS--------
T ss_pred CCCcccCCC-HHHH----HHHHc--CCCEEEECccccCC---------cCHHHHHHHHHHHHHHHHHHHHhC--------
Confidence 99654 2 1222 12222 39999999997532 345678889999999998876542
Q ss_pred cCCCCCCCCceEEEeecCCCcccccCCC-------------------CCccchhhHHHHHHHHHHHHhhccCCCeEEEEe
Q psy11190 139 SAAPLGSSRAAIVNVSSIMGSIEDNTQG-------------------GFHPYRCSKAALNAATRSLSIDLKGDKIIATAM 199 (248)
Q Consensus 139 ~~~~~~~~~~~iv~vss~~~~~~~~~~~-------------------~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v 199 (248)
+..++|++||.+......... ....|+.+|.+.+.+++.++.+. |++++.+
T Consensus 205 -------~~~~~V~iSS~~v~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~iv 274 (478)
T 4dqv_A 205 -------KLKPFTYVSTADVGAAIEPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLC---ALPVAVF 274 (478)
T ss_dssp -------SCCCEEEEEEGGGGTTSCTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHH---CCCEEEE
T ss_pred -------CCCeEEEEeehhhcCccCCCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHh---CCCeEEE
Confidence 345899999965432211000 01349999999999999998753 7999999
Q ss_pred cCcceecC
Q psy11190 200 HPGWVKTD 207 (248)
Q Consensus 200 ~PG~v~t~ 207 (248)
.||.+..+
T Consensus 275 Rpg~v~G~ 282 (478)
T 4dqv_A 275 RCGMILAD 282 (478)
T ss_dssp EECEEECC
T ss_pred ECceeeCC
Confidence 99999765
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.75 E-value=2.2e-18 Score=142.91 Aligned_cols=184 Identities=15% Similarity=0.196 Sum_probs=134.8
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhcC
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVKD 82 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~~ 82 (248)
+++||||+|+||++++++|+ +| ++|++++|+.+.. .. +.+|++|.++ +..+++.+
T Consensus 2 ~ilVtGatG~iG~~l~~~L~-~g----~~V~~~~r~~~~~----------~~---~~~Dl~~~~~-~~~~~~~~------ 56 (273)
T 2ggs_A 2 RTLITGASGQLGIELSRLLS-ER----HEVIKVYNSSEIQ----------GG---YKLDLTDFPR-LEDFIIKK------ 56 (273)
T ss_dssp CEEEETTTSHHHHHHHHHHT-TT----SCEEEEESSSCCT----------TC---EECCTTSHHH-HHHHHHHH------
T ss_pred EEEEECCCChhHHHHHHHHh-cC----CeEEEecCCCcCC----------CC---ceeccCCHHH-HHHHHHhc------
Confidence 69999999999999999999 48 8999999987421 12 7899999888 77776654
Q ss_pred CCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcccc
Q psy11190 83 QGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIED 162 (248)
Q Consensus 83 ~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~~ 162 (248)
++|+||||||.... +.+.++++..+++|+.++.++++++.+. ++++|++||...+.+.
T Consensus 57 -~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~----------------~~~iv~~SS~~~~~~~ 114 (273)
T 2ggs_A 57 -RPDVIINAAAMTDV-----DKCEIEKEKAYKINAEAVRHIVRAGKVI----------------DSYIVHISTDYVFDGE 114 (273)
T ss_dssp -CCSEEEECCCCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHHT----------------TCEEEEEEEGGGSCSS
T ss_pred -CCCEEEECCcccCh-----hhhhhCHHHHHHHhHHHHHHHHHHHHHh----------------CCeEEEEecceeEcCC
Confidence 29999999997543 1234678889999999999999988541 3589999998875433
Q ss_pred cC-------CCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCC--------C---------CCCCCchh
Q psy11190 163 NT-------QGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMG--------G---------SNAPLEVG 218 (248)
Q Consensus 163 ~~-------~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~--------~---------~~~~~~~~ 218 (248)
.. ..+...|+.+|++++.+++. +....+|++.|+ | .+++. . ......++
T Consensus 115 ~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~----~~~~~iR~~~v~-G--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (273)
T 2ggs_A 115 KGNYKEEDIPNPINYYGLSKLLGETFALQ----DDSLIIRTSGIF-R--NKGFPIYVYKTLKEGKTVFAFKGYYSPISAR 187 (273)
T ss_dssp SCSBCTTSCCCCSSHHHHHHHHHHHHHCC----TTCEEEEECCCB-S--SSSHHHHHHHHHHTTCCEEEESCEECCCBHH
T ss_pred CCCcCCCCCCCCCCHHHHHHHHHHHHHhC----CCeEEEeccccc-c--ccHHHHHHHHHHHcCCCEEeecCCCCceEHH
Confidence 10 11356899999999999887 334467777777 4 22210 0 11246799
Q ss_pred hHHHHHHHHhhhcccccccceeeeCC
Q psy11190 219 AATAGIIQFIQSLGEAHNGGFFEYTG 244 (248)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~g~~~~~~g 244 (248)
++++.++..+.... +| .|...|
T Consensus 188 dva~~i~~~~~~~~---~g-~~~i~~ 209 (273)
T 2ggs_A 188 KLASAILELLELRK---TG-IIHVAG 209 (273)
T ss_dssp HHHHHHHHHHHHTC---CE-EEECCC
T ss_pred HHHHHHHHHHhcCc---CC-eEEECC
Confidence 99999999987642 44 555554
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=99.74 E-value=1.3e-17 Score=155.93 Aligned_cols=174 Identities=16% Similarity=0.129 Sum_probs=126.4
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH-HHHHh-hcCCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL-LALAQ-QHSNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~-~~~~~-~~~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
+|++|||||+|+||++++++|+++| ++|++++|+.....+. .++.. ...++.++.+|++|.++ +..+++..
T Consensus 11 ~~~ilVTGatG~IG~~l~~~L~~~G----~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~-l~~~~~~~-- 83 (699)
T 1z45_A 11 SKIVLVTGGAGYIGSHTVVELIENG----YDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKG-LEKVFKEY-- 83 (699)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT----CEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHH-HHHHHHHS--
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCc----CEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHH-HHHHHHhC--
Confidence 3689999999999999999999999 8999999876542221 11111 24578899999999887 77765542
Q ss_pred hhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 79 VVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
++|+|||+||.... .. ..+..+..+++|+.++.++++++.. . +.++||++||.+.
T Consensus 84 -----~~D~Vih~A~~~~~-~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~-----------~~~~iV~~SS~~v 138 (699)
T 1z45_A 84 -----KIDSVIHFAGLKAV-GE----STQIPLRYYHNNILGTVVLLELMQQ----Y-----------NVSKFVFSSSATV 138 (699)
T ss_dssp -----CCCEEEECCSCCCH-HH----HHHSHHHHHHHHHHHHHHHHHHHHH----H-----------TCCEEEEEEEGGG
T ss_pred -----CCCEEEECCcccCc-Cc----cccCHHHHHHHHHHHHHHHHHHHHH----c-----------CCCEEEEECcHHH
Confidence 39999999997543 11 1223455788899999988765533 2 4578999999765
Q ss_pred cccc------------cCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecC
Q psy11190 159 SIED------------NTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTD 207 (248)
Q Consensus 159 ~~~~------------~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~ 207 (248)
.... .+..+...|+.+|++++.+++.++.+. ..++++..+.|+.+..+
T Consensus 139 yg~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~g~~~~ilR~~~vyG~ 198 (699)
T 1z45_A 139 YGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSD-KKSWKFAILRYFNPIGA 198 (699)
T ss_dssp GCCGGGSTTCCSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHS-TTSCEEEEEEECEEECC
T ss_pred hCCCccccccCCccccCCCCCCChHHHHHHHHHHHHHHHHHhc-cCCCcEEEEEeccccCC
Confidence 3211 011234689999999999999998775 46899999998776543
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.73 E-value=2.6e-17 Score=138.72 Aligned_cols=167 Identities=14% Similarity=0.048 Sum_probs=121.4
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhcC
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVKD 82 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~~ 82 (248)
++|||||+|+||++++++|+++|. +.|++++|+..... ...+. .+. +.+|+++.+. ++.+++... ++
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g~---~~V~~~~r~~~~~~-~~~~~----~~~-~~~d~~~~~~-~~~~~~~~~--~~- 67 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKGI---TDILVVDNLKDGTK-FVNLV----DLN-IADYMDKEDF-LIQIMAGEE--FG- 67 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTC---CCEEEEECCSSGGG-GHHHH----TSC-CSEEEEHHHH-HHHHHTTCC--CS-
T ss_pred CEEEEcCccHHHHHHHHHHHHCCC---cEEEEEccCCCCch-hhhcC----cce-eccccccHHH-HHHHHhccc--cC-
Confidence 489999999999999999999884 68999998765421 11111 223 6789988776 555543211 11
Q ss_pred CCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcccc
Q psy11190 83 QGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIED 162 (248)
Q Consensus 83 ~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~~ 162 (248)
++|+|||+||.... +.++.+..+++|+.++.++++++.+. +. ++|++||...+...
T Consensus 68 -~~d~vi~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~a~~~~---------------~~-~~v~~SS~~v~g~~ 123 (310)
T 1eq2_A 68 -DVEAIFHEGACSST-------TEWDGKYMMDNNYQYSKELLHYCLER---------------EI-PFLYASSAATYGGR 123 (310)
T ss_dssp -SCCEEEECCSCCCT-------TCCCHHHHHHHTHHHHHHHHHHHHHH---------------TC-CEEEEEEGGGGTTC
T ss_pred -CCcEEEECcccccC-------cccCHHHHHHHHHHHHHHHHHHHHHc---------------CC-eEEEEeeHHHhCCC
Confidence 49999999996532 33456778889999999998887653 34 89999998653221
Q ss_pred c--------CCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCC
Q psy11190 163 N--------TQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMG 209 (248)
Q Consensus 163 ~--------~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~ 209 (248)
. +..+...|+.+|.+.+.+++.++.+ .|++++.+.||.+..|..
T Consensus 124 ~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~g~~~~~lrp~~v~G~~~ 175 (310)
T 1eq2_A 124 TSDFIESREYEKPLNVYGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPRE 175 (310)
T ss_dssp CSCBCSSGGGCCCSSHHHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSC
T ss_pred CCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeCCcEECcCC
Confidence 1 0123567999999999999998866 479999999999987753
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.72 E-value=1.1e-16 Score=144.52 Aligned_cols=188 Identities=18% Similarity=0.151 Sum_probs=136.1
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHH---HHHHH----------hhcCCceeEEeeccCCch
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVE---LLALA----------QQHSNLHVIELDVTDFSK 67 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~---~~~~~----------~~~~~~~~~~~D~~~~~~ 67 (248)
||++|||||||.||++++++|.++| ++|++++|+...... +.+.+ ....++.++.+|+++.+.
T Consensus 150 ~~~VLVTGatG~iG~~l~~~L~~~g----~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~ 225 (508)
T 4f6l_B 150 LGNTLLTGATGFLGAYLIEALQGYS----HRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDD 225 (508)
T ss_dssp CEEEEESCTTSHHHHHHHHHTBTTE----EEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSS
T ss_pred CCeEEEECCccchHHHHHHHHHhcC----CEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCccccc
Confidence 5789999999999999999999888 999999999874322 21111 124689999999999877
Q ss_pred hhhhHHHHhhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCC
Q psy11190 68 QQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSR 147 (248)
Q Consensus 68 ~v~~~~~~i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~ 147 (248)
+. ... ++|+|||+|+.... ...++..+.+|+.++.++++.+.+ ..
T Consensus 226 -l~--------~~~--~~D~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~----------------~~ 270 (508)
T 4f6l_B 226 -VV--------LPE--NMDTIIHAGARTDH--------FGDDDEFEKVNVQGTVDVIRLAQQ----------------HH 270 (508)
T ss_dssp -CC--------CSS--CCSEEEECCCC----------------CCHHHHHHHHHHHHHHHHT----------------TT
T ss_pred -CC--------Ccc--CCCEEEECCceecC--------CCCHHHHhhhHHHHHHHHHHHHHh----------------CC
Confidence 44 222 59999999997532 234567778899999999888755 14
Q ss_pred ceEEEeecCCCcccc----------------cCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC
Q psy11190 148 AAIVNVSSIMGSIED----------------NTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS 211 (248)
Q Consensus 148 ~~iv~vss~~~~~~~----------------~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~ 211 (248)
.++|++||... ... .+..+...|+.+|.+.+.+++.++. +|++++.+.||.+..+....
T Consensus 271 ~~~v~iSS~~v-G~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~gi~~~ilRp~~v~G~~~~~ 345 (508)
T 4f6l_B 271 ARLIYVSTISV-GTYFDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NGLDGRIVRVGNLTSPYNGR 345 (508)
T ss_dssp CEEEEEEESCT-TSEECTTCSCCEECTTCSCSSBCCCSHHHHHHHHHHHHHHHHHH----TTCEEEEEEECCEESCSSSC
T ss_pred CcEEEeCChhh-ccCCccCCcCcccccccccccccCCCcHHHHHHHHHHHHHHHHH----cCCCEEEEecceeccCCCCC
Confidence 67999999876 110 0012457899999999999988653 58999999999998775432
Q ss_pred CC--------------------------------CCchhhHHHHHHHHhhhcc
Q psy11190 212 NA--------------------------------PLEVGAATAGIIQFIQSLG 232 (248)
Q Consensus 212 ~~--------------------------------~~~~~~~~~~~~~~~~~~~ 232 (248)
.. ...++++++.++.++....
T Consensus 346 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~~~~v~v~DvA~ai~~~~~~~~ 398 (508)
T 4f6l_B 346 WHMRNIKTNRFSMVMNDLLQLDCIGVSMAEMPVDFSFVDTTARQIVALAQVNT 398 (508)
T ss_dssp CCCTTCTTCHHHHHHHHHTTCSEEETTGGGSEEECEEHHHHHHHHHHHTTBCC
T ss_pred cccCCcchHHHHHHHHHHHHcCCCCCCccCceEEEEcHHHHHHHHHHHHhCCC
Confidence 10 1346888888888887643
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=1.3e-17 Score=140.17 Aligned_cols=186 Identities=16% Similarity=0.108 Sum_probs=134.0
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
+++|||||+|+||++++++|+ +| ++|++++|+.. ++.+|++|.++ +..+++..
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~g----~~V~~~~r~~~----------------~~~~D~~d~~~-~~~~~~~~----- 53 (299)
T 1n2s_A 1 MNILLFGKTGQVGWELQRSLA-PV----GNLIALDVHSK----------------EFCGDFSNPKG-VAETVRKL----- 53 (299)
T ss_dssp CEEEEECTTSHHHHHHHHHTT-TT----SEEEEECTTCS----------------SSCCCTTCHHH-HHHHHHHH-----
T ss_pred CeEEEECCCCHHHHHHHHHhh-cC----CeEEEeccccc----------------cccccCCCHHH-HHHHHHhc-----
Confidence 269999999999999999999 89 99999999762 46789999877 66665543
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+|||+||.... . .+.++++..+++|+.++.++++++.+. +.++|++||...+.+
T Consensus 54 --~~d~vih~a~~~~~-~----~~~~~~~~~~~~n~~~~~~l~~a~~~~----------------~~~~v~~SS~~vy~~ 110 (299)
T 1n2s_A 54 --RPDVIVNAAAHTAV-D----KAESEPELAQLLNATSVEAIAKAANET----------------GAWVVHYSTDYVFPG 110 (299)
T ss_dssp --CCSEEEECCCCCCH-H----HHTTCHHHHHHHHTHHHHHHHHHHTTT----------------TCEEEEEEEGGGSCC
T ss_pred --CCCEEEECcccCCH-h----hhhcCHHHHHHHHHHHHHHHHHHHHHc----------------CCcEEEEecccEEeC
Confidence 29999999997543 1 123456777889999999998887432 237999999865432
Q ss_pred cc--------CCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC---------------------
Q psy11190 162 DN--------TQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN--------------------- 212 (248)
Q Consensus 162 ~~--------~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~--------------------- 212 (248)
.. +..+...|+.+|.+.+.+++.++. +++.+.||.+..+.....
T Consensus 111 ~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~-------~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (299)
T 1n2s_A 111 TGDIPWQETDATSPLNVYGKTKLAGEKALQDNCP-------KHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVINDQY 183 (299)
T ss_dssp CTTCCBCTTSCCCCSSHHHHHHHHHHHHHHHHCS-------SEEEEEECSEECSSSCCHHHHHHHHHHHCSEEEEECSCE
T ss_pred CCCCCCCCCCCCCCccHHHHHHHHHHHHHHHhCC-------CeEEEeeeeecCCCcCcHHHHHHHHHhcCCCEEeecCcc
Confidence 21 112356899999999999988753 688999999988753311
Q ss_pred -CCCchhhHHHHHHHHhhhccccc-ccceeeeCC
Q psy11190 213 -APLEVGAATAGIIQFIQSLGEAH-NGGFFEYTG 244 (248)
Q Consensus 213 -~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~g 244 (248)
....++++++.++..+....... .+..|...+
T Consensus 184 ~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~i~~ 217 (299)
T 1n2s_A 184 GAPTGAELLADCTAHAIRVALNKPEVAGLYHLVA 217 (299)
T ss_dssp ECCEEHHHHHHHHHHHHHHHHHCGGGCEEEECCC
T ss_pred cCCeeHHHHHHHHHHHHHHhccccccCceEEEeC
Confidence 02247899999998887642122 344444433
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=99.71 E-value=1.4e-16 Score=133.01 Aligned_cols=180 Identities=18% Similarity=0.166 Sum_probs=131.5
Q ss_pred ceEEEecCCCchhHHHHHHHHhC--CCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGL--GNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~--g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|+++||||+|+||++++++|+++ | ++|++++|+.++...+. ..++.++.+|++|.++ +..+++
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g----~~V~~~~r~~~~~~~l~-----~~~~~~~~~D~~d~~~-l~~~~~----- 65 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPA----SQIIAIVRNVEKASTLA-----DQGVEVRHGDYNQPES-LQKAFA----- 65 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCG----GGEEEEESCTTTTHHHH-----HTTCEEEECCTTCHHH-HHHHTT-----
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCC----CeEEEEEcCHHHHhHHh-----hcCCeEEEeccCCHHH-HHHHHh-----
Confidence 46999999999999999999998 8 99999999887655432 2467889999999877 554422
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
++|+|||+|+.. . . + ++|+.++.++++++.. . +-.++|++||....
T Consensus 66 ----~~d~vi~~a~~~-~-------~-~------~~n~~~~~~l~~a~~~----~-----------~~~~~v~~Ss~~~~ 111 (287)
T 2jl1_A 66 ----GVSKLLFISGPH-Y-------D-N------TLLIVQHANVVKAARD----A-----------GVKHIAYTGYAFAE 111 (287)
T ss_dssp ----TCSEEEECCCCC-S-------C-H------HHHHHHHHHHHHHHHH----T-----------TCSEEEEEEETTGG
T ss_pred ----cCCEEEEcCCCC-c-------C-c------hHHHHHHHHHHHHHHH----c-----------CCCEEEEECCCCCC
Confidence 389999999852 1 1 1 4577777777766533 2 45689999998763
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC-------------------CCCCchhhH
Q psy11190 160 IEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS-------------------NAPLEVGAA 220 (248)
Q Consensus 160 ~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~-------------------~~~~~~~~~ 220 (248)
. ....|+.+|.+.+.+++. .|++++.+.||++.++.... .....++++
T Consensus 112 -~-----~~~~y~~~K~~~E~~~~~-------~~~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dv 178 (287)
T 2jl1_A 112 -E-----SIIPLAHVHLATEYAIRT-------TNIPYTFLRNALYTDFFVNEGLRASTESGAIVTNAGSGIVNSVTRNEL 178 (287)
T ss_dssp -G-----CCSTHHHHHHHHHHHHHH-------TTCCEEEEEECCBHHHHSSGGGHHHHHHTEEEESCTTCCBCCBCHHHH
T ss_pred -C-----CCCchHHHHHHHHHHHHH-------cCCCeEEEECCEeccccchhhHHHHhhCCceeccCCCCccCccCHHHH
Confidence 2 124799999999988753 57999999999876654110 124578999
Q ss_pred HHHHHHHhhhcccccccceeeeCCe
Q psy11190 221 TAGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 221 ~~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
++.++..+.... ..|+.|...|.
T Consensus 179 a~~~~~~~~~~~--~~g~~~~i~~~ 201 (287)
T 2jl1_A 179 ALAAATVLTEEG--HENKTYNLVSN 201 (287)
T ss_dssp HHHHHHHHTSSS--CTTEEEEECCS
T ss_pred HHHHHHHhcCCC--CCCcEEEecCC
Confidence 999999887632 35666666553
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=99.71 E-value=1.2e-17 Score=141.39 Aligned_cols=190 Identities=14% Similarity=0.036 Sum_probs=129.4
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchh----HHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDK----AVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDI 76 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~----~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i 76 (248)
||++|||||+|+||++++++|+++| ++|++++|+... ...+... ....++.++.+|++
T Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~------------- 68 (321)
T 3vps_A 7 KHRILITGGAGFIGGHLARALVASG----EEVTVLDDLRVPPMIPPEGTGKF-LEKPVLELEERDLS------------- 68 (321)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT----CCEEEECCCSSCCSSCCTTSSEE-ECSCGGGCCHHHHT-------------
T ss_pred CCeEEEECCCChHHHHHHHHHHHCC----CEEEEEecCCcccccchhhhhhh-ccCCCeeEEeCccc-------------
Confidence 4689999999999999999999999 899999998652 1110000 00112223333332
Q ss_pred hhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecC
Q psy11190 77 SDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSI 156 (248)
Q Consensus 77 ~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~ 156 (248)
++|+|||+|+...... ..+.....++ |+.++.++++.+.+. +-.++|++||.
T Consensus 69 -------~~d~vi~~a~~~~~~~-----~~~~~~~~~~-n~~~~~~ll~a~~~~---------------~v~~~v~~SS~ 120 (321)
T 3vps_A 69 -------DVRLVYHLASHKSVPR-----SFKQPLDYLD-NVDSGRHLLALCTSV---------------GVPKVVVGSTC 120 (321)
T ss_dssp -------TEEEEEECCCCCCHHH-----HTTSTTTTHH-HHHHHHHHHHHHHHH---------------TCCEEEEEEEG
T ss_pred -------cCCEEEECCccCChHH-----HHhCHHHHHH-HHHHHHHHHHHHHHc---------------CCCeEEEecCH
Confidence 3999999999764311 1122334455 888888888776543 34689999997
Q ss_pred CCcccc--------cCCCCCccchhhHHHHHHHHHHHHhhccCCCe-EEEEecCcceecCCCCCCC--------------
Q psy11190 157 MGSIED--------NTQGGFHPYRCSKAALNAATRSLSIDLKGDKI-IATAMHPGWVKTDMGGSNA-------------- 213 (248)
Q Consensus 157 ~~~~~~--------~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i-~v~~v~PG~v~t~~~~~~~-------------- 213 (248)
..+... .+..+...|+.+|.+.+.+++.++.+ .++ +++.+.|+.+..|......
T Consensus 121 ~v~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~ 197 (321)
T 3vps_A 121 EVYGQADTLPTPEDSPLSPRSPYAASKVGLEMVAGAHQRA---SVAPEVGIVRFFNVYGPGERPDALVPRLCANLLTRNE 197 (321)
T ss_dssp GGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHS---SSSCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHSE
T ss_pred HHhCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCceEEEEeccccCcCCCCCChHHHHHHHHHcCCC
Confidence 654322 11123567999999999999998876 478 9999999999887644311
Q ss_pred ------------CCchhhHHHHHHHHhhhcccccccceeeeC
Q psy11190 214 ------------PLEVGAATAGIIQFIQSLGEAHNGGFFEYT 243 (248)
Q Consensus 214 ------------~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 243 (248)
...++++++.++..+..... | .|...
T Consensus 198 ~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~---g-~~~i~ 235 (321)
T 3vps_A 198 LPVEGDGEQRRDFTYITDVVDKLVALANRPLP---S-VVNFG 235 (321)
T ss_dssp EEEETTSCCEECEEEHHHHHHHHHHGGGSCCC---S-EEEES
T ss_pred eEEeCCCCceEceEEHHHHHHHHHHHHhcCCC---C-eEEec
Confidence 23688999999988877433 4 55544
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=99.70 E-value=6.8e-17 Score=135.08 Aligned_cols=186 Identities=16% Similarity=0.031 Sum_probs=133.6
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
||++|||| +|+||++++++|+++| +.|++++|+.++. ..++.++.+|++|.++ +..+++
T Consensus 3 ~~~ilVtG-aG~iG~~l~~~L~~~g----~~V~~~~r~~~~~---------~~~~~~~~~Dl~d~~~-~~~~~~------ 61 (286)
T 3gpi_A 3 LSKILIAG-CGDLGLELARRLTAQG----HEVTGLRRSAQPM---------PAGVQTLIADVTRPDT-LASIVH------ 61 (286)
T ss_dssp CCCEEEEC-CSHHHHHHHHHHHHTT----CCEEEEECTTSCC---------CTTCCEEECCTTCGGG-CTTGGG------
T ss_pred CCcEEEEC-CCHHHHHHHHHHHHCC----CEEEEEeCCcccc---------ccCCceEEccCCChHH-HHHhhc------
Confidence 46899999 5999999999999999 8999999987652 3578899999999888 665543
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+ ++|+|||+|+... ++.+..+++|+.++.++++++.. . +.+++|++||...+.
T Consensus 62 ~--~~d~vih~a~~~~----------~~~~~~~~~n~~~~~~ll~a~~~----~-----------~~~~~v~~SS~~vyg 114 (286)
T 3gpi_A 62 L--RPEILVYCVAASE----------YSDEHYRLSYVEGLRNTLSALEG----A-----------PLQHVFFVSSTGVYG 114 (286)
T ss_dssp G--CCSEEEECHHHHH----------HC-----CCSHHHHHHHHHHTTT----S-----------CCCEEEEEEEGGGCC
T ss_pred C--CCCEEEEeCCCCC----------CCHHHHHHHHHHHHHHHHHHHhh----C-----------CCCEEEEEcccEEEc
Confidence 1 4999999998632 34566778899998888887653 1 457899999976533
Q ss_pred ccc--------CCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC-----------------CCC
Q psy11190 161 EDN--------TQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN-----------------APL 215 (248)
Q Consensus 161 ~~~--------~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~-----------------~~~ 215 (248)
... +..+...|+.+|.+.+.+ +.. ++++.+.|+.+..+..... ...
T Consensus 115 ~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~-~~~--------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i 185 (286)
T 3gpi_A 115 QEVEEWLDEDTPPIAKDFSGKRMLEAEAL-LAA--------YSSTILRFSGIYGPGRLRMIRQAQTPEQWPARNAWTNRI 185 (286)
T ss_dssp CCCSSEECTTSCCCCCSHHHHHHHHHHHH-GGG--------SSEEEEEECEEEBTTBCHHHHHTTCGGGSCSSBCEECEE
T ss_pred CCCCCCCCCCCCCCCCChhhHHHHHHHHH-Hhc--------CCeEEEecccccCCCchhHHHHHHhcccCCCcCceeEEE
Confidence 211 112456899999999887 432 7889999998877653210 134
Q ss_pred chhhHHHHHHHHhhhcccccccceeeeC
Q psy11190 216 EVGAATAGIIQFIQSLGEAHNGGFFEYT 243 (248)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 243 (248)
.++++++.++..+..+.....+..|...
T Consensus 186 ~v~Dva~~~~~~~~~~~~~~~~~~~~~~ 213 (286)
T 3gpi_A 186 HRDDGAAFIAYLIQQRSHAVPERLYIVT 213 (286)
T ss_dssp EHHHHHHHHHHHHHHHTTSCCCSEEEEC
T ss_pred EHHHHHHHHHHHHhhhccCCCCceEEEe
Confidence 5799999999999875323345555544
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=3.7e-17 Score=138.67 Aligned_cols=155 Identities=13% Similarity=0.045 Sum_probs=117.8
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||+|+||++++++|+++| +.|++++|+. .+|++|.++ +..+++..
T Consensus 4 ~~ilVtGatG~iG~~l~~~L~~~g----~~v~~~~r~~-------------------~~D~~d~~~-~~~~~~~~----- 54 (321)
T 1e6u_A 4 QRVFIAGHRGMVGSAIRRQLEQRG----DVELVLRTRD-------------------ELNLLDSRA-VHDFFASE----- 54 (321)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCT----TEEEECCCTT-------------------TCCTTCHHH-HHHHHHHH-----
T ss_pred CEEEEECCCcHHHHHHHHHHHhCC----CeEEEEecCc-------------------cCCccCHHH-HHHHHHhc-----
Confidence 489999999999999999999999 8999988762 379998877 66665543
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+|||+|+.... . ....++.+..+++|+.++.++++++.+. +..++|++||...+..
T Consensus 55 --~~d~vih~a~~~~~-~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~---------------~~~~~v~~SS~~vyg~ 113 (321)
T 1e6u_A 55 --RIDQVYLAAAKVGG-I---VANNTYPADFIYQNMMIESNIIHAAHQN---------------DVNKLLFLGSSCIYPK 113 (321)
T ss_dssp --CCSEEEECCCCCCC-H---HHHHHCHHHHHHHHHHHHHHHHHHHHHT---------------TCCEEEEECCGGGSCT
T ss_pred --CCCEEEEcCeecCC-c---chhhhCHHHHHHHHHHHHHHHHHHHHHh---------------CCCeEEEEccHHHcCC
Confidence 29999999986531 1 1123455677888999999888877542 3468999999765422
Q ss_pred cc------------CCCC-CccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCC
Q psy11190 162 DN------------TQGG-FHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMG 209 (248)
Q Consensus 162 ~~------------~~~~-~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~ 209 (248)
.. +..+ ...|+.+|.+.+.+++.++.+. +++++.+.||++..+..
T Consensus 114 ~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilrp~~v~G~~~ 171 (321)
T 1e6u_A 114 LAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQY---GRDYRSVMPTNLYGPHD 171 (321)
T ss_dssp TCCSSBCGGGTTSSCCCGGGHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEESTTC
T ss_pred CCCCCcCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEEeCCcCCcCC
Confidence 10 1112 2489999999999999988764 79999999999988754
|
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.69 E-value=9.5e-17 Score=135.30 Aligned_cols=159 Identities=16% Similarity=0.135 Sum_probs=114.9
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
||++|||||+|+||++++++|+++| + +... ....+.++.+|++|.+. +..+++..
T Consensus 6 ~~~vlVtGatG~iG~~l~~~L~~~g----~------~~~~----------~~~~~~~~~~D~~d~~~-~~~~~~~~---- 60 (319)
T 4b8w_A 6 SMRILVTGGSGLVGKAIQKVVADGA----G------LPGE----------DWVFVSSKDADLTDTAQ-TRALFEKV---- 60 (319)
T ss_dssp CCEEEEETCSSHHHHHHHHHHHTTT----C------CTTC----------EEEECCTTTCCTTSHHH-HHHHHHHS----
T ss_pred CCeEEEECCCcHHHHHHHHHHHhcC----C------cccc----------cccccCceecccCCHHH-HHHHHhhc----
Confidence 5789999999999999999999999 4 1110 12245556899999887 66665442
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
++|+|||+|+.... . ..+.++.+..+++|+.++.++++.+.+. +-.++|++||...+.
T Consensus 61 ---~~d~Vih~A~~~~~-~---~~~~~~~~~~~~~nv~gt~~ll~a~~~~---------------~~~~~v~~SS~~vyg 118 (319)
T 4b8w_A 61 ---QPTHVIHLAAMVGG-L---FRNIKYNLDFWRKNVHMNDNVLHSAFEV---------------GARKVVSCLSTCIFP 118 (319)
T ss_dssp ---CCSEEEECCCCCCC-H---HHHTTCHHHHHHHHHHHHHHHHHHHHHT---------------TCSEEEEECCGGGSC
T ss_pred ---CCCEEEECceeccc-c---cccccCHHHHHHHHHHHHHHHHHHHHHc---------------CCCeEEEEcchhhcC
Confidence 39999999997532 1 1123445667889999999888876442 345899999986432
Q ss_pred cc-------------cCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCC
Q psy11190 161 ED-------------NTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMG 209 (248)
Q Consensus 161 ~~-------------~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~ 209 (248)
.. ++.+....|+.+|.+.+.+++.++.+. |++++.+.|+.+..|..
T Consensus 119 ~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~Gp~~ 177 (319)
T 4b8w_A 119 DKTTYPIDETMIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQY---GCTFTAVIPTNVFGPHD 177 (319)
T ss_dssp SSCCSSBCGGGGGBSCCCSSSHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTC
T ss_pred CCCCCCccccccccCCCCCCcchHHHHHHHHHHHHHHHHHhh---CCCEEEEeeccccCCCC
Confidence 21 011112259999999999999988764 79999999999987754
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=7.2e-16 Score=128.52 Aligned_cols=177 Identities=20% Similarity=0.219 Sum_probs=125.5
Q ss_pred eEEEecCCCchhHHHHHHHHhC--CCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 3 SILITGCNRGLGLGMIKVLVGL--GNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~--g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
+++||||+|+||++++++|+++ | ++|++++|+.++...+. ...+.++.+|++|.++ +..++
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g----~~V~~~~r~~~~~~~~~-----~~~~~~~~~D~~d~~~-~~~~~------- 63 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPA----SQIVAIVRNPAKAQALA-----AQGITVRQADYGDEAA-LTSAL------- 63 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCG----GGEEEEESCTTTCHHHH-----HTTCEEEECCTTCHHH-HHHHT-------
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCC----ceEEEEEcChHhhhhhh-----cCCCeEEEcCCCCHHH-HHHHH-------
Confidence 4899999999999999999998 8 99999999987655432 2367889999999877 55442
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
. ++|+|||+|+... + .|+.++.++++++ .+. +.+++|++||....
T Consensus 64 ~--~~d~vi~~a~~~~----------~-------~~~~~~~~l~~a~----~~~-----------~~~~~v~~Ss~~~~- 108 (286)
T 2zcu_A 64 Q--GVEKLLLISSSEV----------G-------QRAPQHRNVINAA----KAA-----------GVKFIAYTSLLHAD- 108 (286)
T ss_dssp T--TCSEEEECC-------------------------CHHHHHHHHH----HHH-----------TCCEEEEEEETTTT-
T ss_pred h--CCCEEEEeCCCCc----------h-------HHHHHHHHHHHHH----HHc-----------CCCEEEEECCCCCC-
Confidence 2 3899999998521 0 2455555555444 443 45789999998764
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCC------------------CCCCCchhhHHH
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGG------------------SNAPLEVGAATA 222 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~------------------~~~~~~~~~~~~ 222 (248)
. ....|+.+|.+.+.+++. .+++++.+.||++.+++.. ......++++++
T Consensus 109 ~-----~~~~y~~sK~~~e~~~~~-------~~~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~ 176 (286)
T 2zcu_A 109 T-----SPLGLADEHIETEKMLAD-------SGIVYTLLRNGWYSENYLASAPAALEHGVFIGAAGDGKIASATRADYAA 176 (286)
T ss_dssp T-----CCSTTHHHHHHHHHHHHH-------HCSEEEEEEECCBHHHHHTTHHHHHHHTEEEESCTTCCBCCBCHHHHHH
T ss_pred C-----CcchhHHHHHHHHHHHHH-------cCCCeEEEeChHHhhhhHHHhHHhhcCCceeccCCCCccccccHHHHHH
Confidence 2 124799999999998764 4799999999987664311 112467899999
Q ss_pred HHHHHhhhcccccccceeeeCCe
Q psy11190 223 GIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 223 ~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
.++..+..+. ..|+.|...|.
T Consensus 177 ~~~~~~~~~~--~~g~~~~i~~~ 197 (286)
T 2zcu_A 177 AAARVISEAG--HEGKVYELAGD 197 (286)
T ss_dssp HHHHHHHSSS--CTTCEEEECCS
T ss_pred HHHHHhcCCC--CCCceEEEeCC
Confidence 9999887632 35666666554
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=99.68 E-value=7.2e-16 Score=129.65 Aligned_cols=192 Identities=11% Similarity=0.027 Sum_probs=130.2
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|+++||||+|+||++++++|+++|. ++|++++|+.++... ..+. ...+.++++|++|.++ +..++ .
T Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~g~---~~V~~~~R~~~~~~~-~~l~--~~~~~~~~~D~~d~~~-l~~~~-------~ 71 (299)
T 2wm3_A 6 KLVVVFGGTGAQGGSVARTLLEDGT---FKVRVVTRNPRKKAA-KELR--LQGAEVVQGDQDDQVI-MELAL-------N 71 (299)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCS---SEEEEEESCTTSHHH-HHHH--HTTCEEEECCTTCHHH-HHHHH-------T
T ss_pred CEEEEECCCchHHHHHHHHHHhcCC---ceEEEEEcCCCCHHH-HHHH--HCCCEEEEecCCCHHH-HHHHH-------h
Confidence 6899999999999999999998872 789999999776432 1221 2468899999999877 55443 2
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+|||+++.... . . ...| +..++.+++.+.+. +.++||++|+ .+..+
T Consensus 72 --~~d~vi~~a~~~~~-~-----~-------~~~~----~~~~~~~~~aa~~~-----------gv~~iv~~S~-~~~~~ 120 (299)
T 2wm3_A 72 --GAYATFIVTNYWES-C-----S-------QEQE----VKQGKLLADLARRL-----------GLHYVVYSGL-ENIKK 120 (299)
T ss_dssp --TCSEEEECCCHHHH-T-----C-------HHHH----HHHHHHHHHHHHHH-----------TCSEEEECCC-CCHHH
T ss_pred --cCCEEEEeCCCCcc-c-----c-------chHH----HHHHHHHHHHHHHc-----------CCCEEEEEcC-ccccc
Confidence 39999999985321 0 0 1122 33455566666554 4678999555 44333
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC--------C-------C-------CCchhh
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS--------N-------A-------PLEVGA 219 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~--------~-------~-------~~~~~~ 219 (248)
.........|..+|.+++.+.+. .|++++.+.||++.+++... . + ...+++
T Consensus 121 ~~~~~~~~~y~~sK~~~e~~~~~-------~gi~~~ilrp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~D 193 (299)
T 2wm3_A 121 LTAGRLAAAHFDGKGEVEEYFRD-------IGVPMTSVRLPCYFENLLSHFLPQKAPDGKSYLLSLPTGDVPMDGMSVSD 193 (299)
T ss_dssp HTTTSCCCHHHHHHHHHHHHHHH-------HTCCEEEEECCEEGGGGGTTTCCEECTTSSSEEECCCCTTSCEEEECGGG
T ss_pred cCCCcccCchhhHHHHHHHHHHH-------CCCCEEEEeecHHhhhchhhcCCcccCCCCEEEEEecCCCCccceecHHH
Confidence 21112246799999999988764 37999999999988764221 0 0 136889
Q ss_pred HHHHHHHHhhhcccccccceeeeCCee
Q psy11190 220 ATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 220 ~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
+++.++..+..+. ...|+.|...|..
T Consensus 194 va~~~~~~l~~~~-~~~g~~~~~~g~~ 219 (299)
T 2wm3_A 194 LGPVVLSLLKMPE-KYVGQNIGLSTCR 219 (299)
T ss_dssp HHHHHHHHHHSHH-HHTTCEEECCSEE
T ss_pred HHHHHHHHHcChh-hhCCeEEEeeecc
Confidence 9999999887532 2356667666643
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=1.9e-15 Score=130.31 Aligned_cols=186 Identities=18% Similarity=0.177 Sum_probs=127.6
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEee-ccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD-VTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D-~~~~~~~v~~~~~~i~~~~ 80 (248)
|+++||||||+||++++++|+++| ++|++++|+.++... ..+ .....+.++.+| ++|.++ +..++
T Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~g----~~V~~~~R~~~~~~~-~~l-~~~~~v~~v~~D~l~d~~~-l~~~~------- 71 (352)
T 1xgk_A 6 KTIAVVGATGRQGASLIRVAAAVG----HHVRAQVHSLKGLIA-EEL-QAIPNVTLFQGPLLNNVPL-MDTLF------- 71 (352)
T ss_dssp CCEEEESTTSHHHHHHHHHHHHTT----CCEEEEESCSCSHHH-HHH-HTSTTEEEEESCCTTCHHH-HHHHH-------
T ss_pred CEEEEECCCCHHHHHHHHHHHhCC----CEEEEEECCCChhhH-HHH-hhcCCcEEEECCccCCHHH-HHHHH-------
Confidence 579999999999999999999999 899999998876421 122 223468889999 999877 55442
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCC-CceEEEeecCC-C
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSS-RAAIVNVSSIM-G 158 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~-~~~iv~vss~~-~ 158 (248)
. ++|+||||++.... ..|.. .+.+++.+.+. + -++||++||.. +
T Consensus 72 ~--~~d~Vi~~a~~~~~----------------~~~~~-----~~~l~~aa~~~-----------g~v~~~V~~SS~~~~ 117 (352)
T 1xgk_A 72 E--GAHLAFINTTSQAG----------------DEIAI-----GKDLADAAKRA-----------GTIQHYIYSSMPDHS 117 (352)
T ss_dssp T--TCSEEEECCCSTTS----------------CHHHH-----HHHHHHHHHHH-----------SCCSEEEEEECCCGG
T ss_pred h--cCCEEEEcCCCCCc----------------HHHHH-----HHHHHHHHHHc-----------CCccEEEEeCCcccc
Confidence 2 38999999874310 11332 35555555553 4 47899999986 3
Q ss_pred cccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC-----------C-------C-------
Q psy11190 159 SIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS-----------N-------A------- 213 (248)
Q Consensus 159 ~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~-----------~-------~------- 213 (248)
..+. .....|..+|.+.+.+++.+ +++++.|.||++....... . .
T Consensus 118 ~~~~---~~~~~y~~sK~~~E~~~~~~-------gi~~~ivrpg~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 187 (352)
T 1xgk_A 118 LYGP---WPAVPMWAPKFTVENYVRQL-------GLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPL 187 (352)
T ss_dssp GTSS---CCCCTTTHHHHHHHHHHHTS-------SSCEEEEEECEEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCE
T ss_pred ccCC---CCCccHHHHHHHHHHHHHHc-------CCCEEEEecceecCCchhcccccccccccCCCceEEeeccCCCCce
Confidence 3333 34567999999999988653 7899999999875433210 0 0
Q ss_pred -CCch-hhHHHHHHHHhhhcccccccceeeeCCe
Q psy11190 214 -PLEV-GAATAGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 214 -~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
...+ +++++.++..+........|+.|...+.
T Consensus 188 ~~i~v~~Dva~ai~~~l~~~~~~~~g~~~~l~~~ 221 (352)
T 1xgk_A 188 PWLDAEHDVGPALLQIFKDGPQKWNGHRIALTFE 221 (352)
T ss_dssp EEECHHHHHHHHHHHHHHHCHHHHTTCEEEECSE
T ss_pred eeEecHHHHHHHHHHHHhCCchhhCCeEEEEecC
Confidence 1235 7999999998876433334555555543
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=99.64 E-value=1.3e-14 Score=120.97 Aligned_cols=177 Identities=10% Similarity=0.034 Sum_probs=125.0
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
||++||||+ |.||++++++|+++| ++|++++|+.++...+. ..++.++.+|++|.+ +
T Consensus 5 ~~~ilVtGa-G~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~-----~~~~~~~~~D~~d~~-------------~ 61 (286)
T 3ius_A 5 TGTLLSFGH-GYTARVLSRALAPQG----WRIIGTSRNPDQMEAIR-----ASGAEPLLWPGEEPS-------------L 61 (286)
T ss_dssp CCEEEEETC-CHHHHHHHHHHGGGT----CEEEEEESCGGGHHHHH-----HTTEEEEESSSSCCC-------------C
T ss_pred cCcEEEECC-cHHHHHHHHHHHHCC----CEEEEEEcChhhhhhHh-----hCCCeEEEecccccc-------------c
Confidence 578999998 999999999999999 99999999987765442 246889999998832 1
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
. ++|+|||+|+.... . +. ..+.++..+.+... +..++|++||...+.
T Consensus 62 ~--~~d~vi~~a~~~~~-~-------~~--------------~~~~l~~a~~~~~~---------~~~~~v~~Ss~~vyg 108 (286)
T 3ius_A 62 D--GVTHLLISTAPDSG-G-------DP--------------VLAALGDQIAARAA---------QFRWVGYLSTTAVYG 108 (286)
T ss_dssp T--TCCEEEECCCCBTT-B-------CH--------------HHHHHHHHHHHTGG---------GCSEEEEEEEGGGGC
T ss_pred C--CCCEEEECCCcccc-c-------cH--------------HHHHHHHHHHhhcC---------CceEEEEeecceecC
Confidence 2 49999999986532 1 00 12445555554210 357899999975432
Q ss_pred ccc--------CCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC------------------CC
Q psy11190 161 EDN--------TQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN------------------AP 214 (248)
Q Consensus 161 ~~~--------~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~------------------~~ 214 (248)
... +..+...|+.+|.+.+.+++.+ .+++++.+.|+.+..+..... ..
T Consensus 109 ~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (286)
T 3ius_A 109 DHDGAWVDETTPLTPTAARGRWRVMAEQQWQAV------PNLPLHVFRLAGIYGPGRGPFSKLGKGGIRRIIKPGQVFSR 182 (286)
T ss_dssp CCTTCEECTTSCCCCCSHHHHHHHHHHHHHHHS------TTCCEEEEEECEEEBTTBSSSTTSSSSCCCEEECTTCCBCE
T ss_pred CCCCCCcCCCCCCCCCCHHHHHHHHHHHHHHhh------cCCCEEEEeccceECCCchHHHHHhcCCccccCCCCcccce
Confidence 210 1123457999999999988876 579999999999987742211 12
Q ss_pred CchhhHHHHHHHHhhhcccccccceeee
Q psy11190 215 LEVGAATAGIIQFIQSLGEAHNGGFFEY 242 (248)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 242 (248)
...+++++.++..+.... .|..|..
T Consensus 183 i~v~Dva~a~~~~~~~~~---~g~~~~i 207 (286)
T 3ius_A 183 IHVEDIAQVLAASMARPD---PGAVYNV 207 (286)
T ss_dssp EEHHHHHHHHHHHHHSCC---TTCEEEE
T ss_pred EEHHHHHHHHHHHHhCCC---CCCEEEE
Confidence 346899999999988744 3444444
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.62 E-value=5.7e-15 Score=124.37 Aligned_cols=170 Identities=15% Similarity=0.120 Sum_probs=115.4
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCc-------hhHHHHHHHHhhcCCceeEEeeccCCchhhhhHH
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNK-------DKAVELLALAQQHSNLHVIELDVTDFSKQQDVLF 73 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~ 73 (248)
||+++||||||+||++++++|+++| ++|++++|+. ++.+.+.++. ...+.++++|++|.++ +..++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g----~~V~~~~R~~~~~~~~~~~~~~~~~l~--~~~v~~v~~D~~d~~~-l~~~~ 74 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAG----NPTYALVRKTITAANPETKEELIDNYQ--SLGVILLEGDINDHET-LVKAI 74 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHT----CCEEEEECCSCCSSCHHHHHHHHHHHH--HTTCEEEECCTTCHHH-HHHHH
T ss_pred CcEEEEECCCchHHHHHHHHHHhCC----CcEEEEECCCcccCChHHHHHHHHHHH--hCCCEEEEeCCCCHHH-HHHHH
Confidence 6889999999999999999999999 8999999986 4443333322 3468899999999877 55443
Q ss_pred HHhhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCC-CceEEE
Q psy11190 74 KDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSS-RAAIVN 152 (248)
Q Consensus 74 ~~i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~-~~~iv~ 152 (248)
+ ++|+|||++|... +.+..+++ +.+.+. + -.++|
T Consensus 75 ~---------~~d~vi~~a~~~~--------------------~~~~~~l~----~aa~~~-----------g~v~~~v- 109 (307)
T 2gas_A 75 K---------QVDIVICAAGRLL--------------------IEDQVKII----KAIKEA-----------GNVKKFF- 109 (307)
T ss_dssp T---------TCSEEEECSSSSC--------------------GGGHHHHH----HHHHHH-----------CCCSEEE-
T ss_pred h---------CCCEEEECCcccc--------------------cccHHHHH----HHHHhc-----------CCceEEe-
Confidence 2 3999999998531 22333444 444443 3 45676
Q ss_pred eecCCCcccc---cCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC---------C--------
Q psy11190 153 VSSIMGSIED---NTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS---------N-------- 212 (248)
Q Consensus 153 vss~~~~~~~---~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~---------~-------- 212 (248)
.|..+.... ...+....| .+|.+++.+.+. .+++++.+.||++.+++... .
T Consensus 110 -~S~~g~~~~~~~~~~p~~~~y-~sK~~~e~~~~~-------~~i~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (307)
T 2gas_A 110 -PSEFGLDVDRHDAVEPVRQVF-EEKASIRRVIEA-------EGVPYTYLCCHAFTGYFLRNLAQLDATDPPRDKVVILG 180 (307)
T ss_dssp -CSCCSSCTTSCCCCTTHHHHH-HHHHHHHHHHHH-------HTCCBEEEECCEETTTTGGGTTCTTCSSCCSSEEEEET
T ss_pred -ecccccCcccccCCCcchhHH-HHHHHHHHHHHH-------cCCCeEEEEcceeeccccccccccccccCCCCeEEEec
Confidence 344442111 011224578 999999887753 36889999999887754210 0
Q ss_pred ------CCCchhhHHHHHHHHhhhc
Q psy11190 213 ------APLEVGAATAGIIQFIQSL 231 (248)
Q Consensus 213 ------~~~~~~~~~~~~~~~~~~~ 231 (248)
....++++++.++..+..+
T Consensus 181 ~~~~~~~~i~~~Dva~~~~~~l~~~ 205 (307)
T 2gas_A 181 DGNVKGAYVTEADVGTFTIRAANDP 205 (307)
T ss_dssp TSCSEEEEECHHHHHHHHHHHHTCG
T ss_pred CCCcceEEeeHHHHHHHHHHHHcCc
Confidence 0246889999999988764
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=1.7e-14 Score=123.86 Aligned_cols=172 Identities=12% Similarity=0.061 Sum_probs=122.2
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCc----hhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNK----DKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDIS 77 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~ 77 (248)
|+++||||||+||++++++|+++| +.|++++|+. ++...+.++. ..++.++++|++|.++ +..++++.
T Consensus 11 ~~IlVtGatG~iG~~l~~~L~~~g----~~V~~l~R~~~~~~~~~~~~~~l~--~~~v~~~~~Dl~d~~~-l~~~~~~~- 82 (346)
T 3i6i_A 11 GRVLIAGATGFIGQFVATASLDAH----RPTYILARPGPRSPSKAKIFKALE--DKGAIIVYGLINEQEA-MEKILKEH- 82 (346)
T ss_dssp CCEEEECTTSHHHHHHHHHHHHTT----CCEEEEECSSCCCHHHHHHHHHHH--HTTCEEEECCTTCHHH-HHHHHHHT-
T ss_pred CeEEEECCCcHHHHHHHHHHHHCC----CCEEEEECCCCCChhHHHHHHHHH--hCCcEEEEeecCCHHH-HHHHHhhC-
Confidence 589999999999999999999999 8999999987 2333222222 4578999999999887 66665442
Q ss_pred hhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCC-CceEEEeecC
Q psy11190 78 DVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSS-RAAIVNVSSI 156 (248)
Q Consensus 78 ~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~-~~~iv~vss~ 156 (248)
++|+|||+++.. |+.++.++++++... + -.++++ |.
T Consensus 83 ------~~d~Vi~~a~~~--------------------n~~~~~~l~~aa~~~---------------g~v~~~v~--S~ 119 (346)
T 3i6i_A 83 ------EIDIVVSTVGGE--------------------SILDQIALVKAMKAV---------------GTIKRFLP--SE 119 (346)
T ss_dssp ------TCCEEEECCCGG--------------------GGGGHHHHHHHHHHH---------------CCCSEEEC--SC
T ss_pred ------CCCEEEECCchh--------------------hHHHHHHHHHHHHHc---------------CCceEEee--cc
Confidence 399999999862 667777666665432 3 445664 33
Q ss_pred CCccc--ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC----------------------
Q psy11190 157 MGSIE--DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN---------------------- 212 (248)
Q Consensus 157 ~~~~~--~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~---------------------- 212 (248)
.+... ..+..+...|+.+|.+++.+.+. .|++++.+.||++........
T Consensus 120 ~g~~~~e~~~~~p~~~y~~sK~~~e~~l~~-------~g~~~tivrpg~~~g~~~~~~~~~~~~~~~~~~~~~~g~g~~~ 192 (346)
T 3i6i_A 120 FGHDVNRADPVEPGLNMYREKRRVRQLVEE-------SGIPFTYICCNSIASWPYYNNIHPSEVLPPTDFFQIYGDGNVK 192 (346)
T ss_dssp CSSCTTTCCCCTTHHHHHHHHHHHHHHHHH-------TTCCBEEEECCEESSCCCSCC-----CCCCSSCEEEETTSCCC
T ss_pred cCCCCCccCcCCCcchHHHHHHHHHHHHHH-------cCCCEEEEEecccccccCccccccccccCCCceEEEccCCCce
Confidence 33221 11123456799999998887764 478999999998876542111
Q ss_pred -CCCchhhHHHHHHHHhhhc
Q psy11190 213 -APLEVGAATAGIIQFIQSL 231 (248)
Q Consensus 213 -~~~~~~~~~~~~~~~~~~~ 231 (248)
....++++++.++..+..+
T Consensus 193 ~~~i~~~Dva~~~~~~l~~~ 212 (346)
T 3i6i_A 193 AYFVAGTDIGKFTMKTVDDV 212 (346)
T ss_dssp EEEECHHHHHHHHHHHTTCG
T ss_pred EEecCHHHHHHHHHHHHhCc
Confidence 0246899999999988774
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.62 E-value=2.6e-15 Score=125.55 Aligned_cols=181 Identities=17% Similarity=0.163 Sum_probs=121.5
Q ss_pred ceEEEecCCCchhHHHHHHHHhC-CCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGL-GNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~-g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
+++|||||||+||++++++|+++ | ++|++++|+.++...+ ...++.++++|++|.++ +..++
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g----~~V~~~~R~~~~~~~~-----~~~~v~~~~~D~~d~~~-l~~~~------- 63 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHI----DHFHIGVRNVEKVPDD-----WRGKVSVRQLDYFNQES-MVEAF------- 63 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTC----TTEEEEESSGGGSCGG-----GBTTBEEEECCTTCHHH-HHHHT-------
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCC----CcEEEEECCHHHHHHh-----hhCCCEEEEcCCCCHHH-HHHHH-------
Confidence 14999999999999999999988 7 8999999998764432 23578999999999877 55443
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
. ++|+|||+||.... . . .|+.+ ++.+++.+++. +-++||++||.....
T Consensus 64 ~--~~d~vi~~a~~~~~-~-------~-------~~~~~----~~~l~~aa~~~-----------gv~~iv~~Ss~~~~~ 111 (289)
T 3e48_A 64 K--GMDTVVFIPSIIHP-S-------F-------KRIPE----VENLVYAAKQS-----------GVAHIIFIGYYADQH 111 (289)
T ss_dssp T--TCSEEEECCCCCCS-H-------H-------HHHHH----HHHHHHHHHHT-----------TCCEEEEEEESCCST
T ss_pred h--CCCEEEEeCCCCcc-c-------h-------hhHHH----HHHHHHHHHHc-----------CCCEEEEEcccCCCC
Confidence 2 39999999986432 0 0 13333 45555555554 457899999955322
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCC-------------CC-----CCCchhhHHH
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGG-------------SN-----APLEVGAATA 222 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~-------------~~-----~~~~~~~~~~ 222 (248)
. ..|..++... + +...+...|++++.+.||++.+++.. .. ....++++++
T Consensus 112 ~-------~~~~~~~~~~--~---~e~~~~~~g~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~ 179 (289)
T 3e48_A 112 N-------NPFHMSPYFG--Y---ASRLLSTSGIDYTYVRMAMYMDPLKPYLPELMNMHKLIYPAGDGRINYITRNDIAR 179 (289)
T ss_dssp T-------CCSTTHHHHH--H---HHHHHHHHCCEEEEEEECEESTTHHHHHHHHHHHTEECCCCTTCEEEEECHHHHHH
T ss_pred C-------CCCccchhHH--H---HHHHHHHcCCCEEEEeccccccccHHHHHHHHHCCCEecCCCCceeeeEEHHHHHH
Confidence 1 2233333221 1 22223346899999999999886421 00 1357899999
Q ss_pred HHHHHhhhcccccccceeeeCCe
Q psy11190 223 GIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 223 ~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
.++..+..+... |+.|...+.
T Consensus 180 ~~~~~l~~~~~~--g~~~~~~~~ 200 (289)
T 3e48_A 180 GVIAIIKNPDTW--GKRYLLSGY 200 (289)
T ss_dssp HHHHHHHCGGGT--TCEEEECCE
T ss_pred HHHHHHcCCCcC--CceEEeCCC
Confidence 999998875432 666655543
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=99.58 E-value=2e-14 Score=124.40 Aligned_cols=169 Identities=20% Similarity=0.127 Sum_probs=124.5
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCc-eEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPA-HIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
+++|||||+|.||++++++|+++| . .|+.++|+ +|.++ ++.+++
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g----~~~v~~~d~~------------------------~d~~~-l~~~~~------ 45 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTT----DHHIFEVHRQ------------------------TKEEE-LESALL------ 45 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHC----CCEEEECCTT------------------------CCHHH-HHHHHH------
T ss_pred CEEEEECCCCHHHHHHHHHHHhCC----CCEEEEECCC------------------------CCHHH-HHHHhc------
Confidence 259999999999999999999999 6 77777764 44444 444432
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCC-ceEEEeecCCCc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSR-AAIVNVSSIMGS 159 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~-~~iv~vss~~~~ 159 (248)
++|+|||+||...+ ++.+..+++|+.++.++++++.+. +. .++|++||....
T Consensus 46 ---~~d~Vih~a~~~~~---------~~~~~~~~~n~~~~~~l~~a~~~~---------------~~~~~~v~~Ss~~~~ 98 (369)
T 3st7_A 46 ---KADFIVHLAGVNRP---------EHDKEFSLGNVSYLDHVLDILTRN---------------TKKPAILLSSSIQAT 98 (369)
T ss_dssp ---HCSEEEECCCSBCT---------TCSTTCSSSCCBHHHHHHHHHTTC---------------SSCCEEEEEEEGGGG
T ss_pred ---cCCEEEECCcCCCC---------CCHHHHHHHHHHHHHHHHHHHHHh---------------CCCCeEEEeCchhhc
Confidence 28999999997542 345667888999998888876432 23 489999998764
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC--------------------------
Q psy11190 160 IEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA-------------------------- 213 (248)
Q Consensus 160 ~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~-------------------------- 213 (248)
. ...|+.+|.+.+.+++.++.+. +++++.+.|+.+..+...+..
T Consensus 99 ~-------~~~Y~~sK~~~E~~~~~~~~~~---g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (369)
T 3st7_A 99 Q-------DNPYGESKLQGEQLLREYAEEY---GNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQVNDRNVEL 168 (369)
T ss_dssp S-------CSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCCSCTTCEE
T ss_pred C-------CCCchHHHHHHHHHHHHHHHHh---CCCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEecCCCeEE
Confidence 2 5679999999999999988764 689999999999877543210
Q ss_pred -CCchhhHHHHHHHHhhhcccccccceeeeC
Q psy11190 214 -PLEVGAATAGIIQFIQSLGEAHNGGFFEYT 243 (248)
Q Consensus 214 -~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 243 (248)
...++++++.++..+...... .+..+...
T Consensus 169 ~~i~v~Dva~~~~~~l~~~~~~-~~~~~~i~ 198 (369)
T 3st7_A 169 TLNYVDDIVAEIKRAIEGTPTI-ENGVPTVP 198 (369)
T ss_dssp EEEEHHHHHHHHHHHHHTCCCE-ETTEECCS
T ss_pred EEEEHHHHHHHHHHHHhCCccc-CCceEEeC
Confidence 234789999999988774332 24455443
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.54 E-value=3.5e-14 Score=128.37 Aligned_cols=190 Identities=15% Similarity=0.089 Sum_probs=129.3
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
||++|||||+|.||++++++|+++| +.|++++|+..+. ..+.+|+.+... +.+
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G----~~V~~l~R~~~~~-------------~~v~~d~~~~~~----------~~l 199 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGG----HEVIQLVRKEPKP-------------GKRFWDPLNPAS----------DLL 199 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTT----CEEEEEESSSCCT-------------TCEECCTTSCCT----------TTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC----CEEEEEECCCCCc-------------cceeecccchhH----------Hhc
Confidence 5689999999999999999999999 9999999987642 226677764321 222
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
. ++|+|||+||.... . ..+.+..+..+++|+.++.++++.+.. .. +..++|++||...+.
T Consensus 200 ~--~~D~Vih~A~~~~~-~---~~~~~~~~~~~~~Nv~gt~~ll~a~a~---~~-----------~~~r~V~~SS~~vyg 259 (516)
T 3oh8_A 200 D--GADVLVHLAGEPIF-G---RFNDSHKEAIRESRVLPTKFLAELVAE---ST-----------QCTTMISASAVGFYG 259 (516)
T ss_dssp T--TCSEEEECCCC---------CCGGGHHHHHHHTHHHHHHHHHHHHH---CS-----------SCCEEEEEEEGGGGC
T ss_pred C--CCCEEEECCCCccc-c---ccchhHHHHHHHHHHHHHHHHHHHHHh---cC-----------CCCEEEEeCcceEec
Confidence 2 49999999997533 2 345567788889999999999886432 21 356899999966443
Q ss_pred -cc-------cCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCC----------C-----------
Q psy11190 161 -ED-------NTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGG----------S----------- 211 (248)
Q Consensus 161 -~~-------~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~----------~----------- 211 (248)
.. ....+...|+.+|...+.+.+. ....|++++.+.||.+..+... .
T Consensus 260 ~~~~~~~~~E~~~~~~~~y~~~~~~~E~~~~~----~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~g~~~~~g~g~~ 335 (516)
T 3oh8_A 260 HDRGDEILTEESESGDDFLAEVCRDWEHATAP----ASDAGKRVAFIRTGVALSGRGGMLPLLKTLFSTGLGGKFGDGTS 335 (516)
T ss_dssp SEEEEEEECTTSCCCSSHHHHHHHHHHHTTHH----HHHTTCEEEEEEECEEEBTTBSHHHHHHHTTC---CCCCTTSCC
T ss_pred CCCCCCccCCCCCCCcChHHHHHHHHHHHHHH----HHhCCCCEEEEEeeEEECCCCChHHHHHHHHHhCCCcccCCCCc
Confidence 11 0112345677778777665433 2356899999999999886411 0
Q ss_pred -CCCCchhhHHHHHHHHhhhcccccccceeeeC
Q psy11190 212 -NAPLEVGAATAGIIQFIQSLGEAHNGGFFEYT 243 (248)
Q Consensus 212 -~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 243 (248)
.....++++++.++..+.... ..|.|.-..
T Consensus 336 ~~~~i~v~Dva~ai~~~l~~~~--~~g~~ni~~ 366 (516)
T 3oh8_A 336 WFSWIAIDDLTDIYYRAIVDAQ--ISGPINAVA 366 (516)
T ss_dssp EECEEEHHHHHHHHHHHHHCTT--CCEEEEESC
T ss_pred eEceEeHHHHHHHHHHHHhCcc--cCCcEEEEC
Confidence 012457899999999887643 344443333
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.51 E-value=1.4e-13 Score=116.19 Aligned_cols=174 Identities=17% Similarity=0.190 Sum_probs=115.7
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCch-----hHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHH
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKD-----KAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKD 75 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~ 75 (248)
||+++||||||+||++++++|+++| ++|++++|+.. +.+.+.++ ....+.++++|++|.++ +..+++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g----~~V~~~~R~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~d~~~-l~~~~~- 75 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLG----HPTYVLFRPEVVSNIDKVQMLLYF--KQLGAKLIEASLDDHQR-LVDALK- 75 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTT----CCEEEECCSCCSSCHHHHHHHHHH--HTTTCEEECCCSSCHHH-HHHHHT-
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCC----CcEEEEECCCcccchhHHHHHHHH--HhCCeEEEeCCCCCHHH-HHHHHh-
Confidence 4689999999999999999999999 89999999853 22222222 23578899999999877 554432
Q ss_pred hhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCC-CceEEEee
Q psy11190 76 ISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSS-RAAIVNVS 154 (248)
Q Consensus 76 i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~-~~~iv~vs 154 (248)
++|+|||+++.... . .|+.+..++++++ .+. + -.++|+
T Consensus 76 --------~~d~vi~~a~~~~~-~---------------~~~~~~~~l~~aa----~~~-----------g~v~~~v~-- 114 (313)
T 1qyd_A 76 --------QVDVVISALAGGVL-S---------------HHILEQLKLVEAI----KEA-----------GNIKRFLP-- 114 (313)
T ss_dssp --------TCSEEEECCCCSSS-S---------------TTTTTHHHHHHHH----HHS-----------CCCSEEEC--
T ss_pred --------CCCEEEECCccccc-h---------------hhHHHHHHHHHHH----Hhc-----------CCCceEEe--
Confidence 39999999986532 1 1455555555444 332 3 457774
Q ss_pred cCCCccccc---C-CCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCC----C-------CC-------
Q psy11190 155 SIMGSIEDN---T-QGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMG----G-------SN------- 212 (248)
Q Consensus 155 s~~~~~~~~---~-~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~----~-------~~------- 212 (248)
|..+..... + .+....| .+|.+++.+.+. .|++++.+.||++..++. . ..
T Consensus 115 S~~g~~~~~~~~~~~p~~~~y-~sK~~~e~~~~~-------~g~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (313)
T 1qyd_A 115 SEFGMDPDIMEHALQPGSITF-IDKRKVRRAIEA-------ASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYG 186 (313)
T ss_dssp SCCSSCTTSCCCCCSSTTHHH-HHHHHHHHHHHH-------TTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBT
T ss_pred cCCcCCccccccCCCCCcchH-HHHHHHHHHHHh-------cCCCeEEEEeceeccccccccccccccccCCCCeEEEeC
Confidence 434321110 0 1224568 999998887752 468888889988754211 1 00
Q ss_pred ------CCCchhhHHHHHHHHhhhc
Q psy11190 213 ------APLEVGAATAGIIQFIQSL 231 (248)
Q Consensus 213 ------~~~~~~~~~~~~~~~~~~~ 231 (248)
....++++++.++..+..+
T Consensus 187 ~g~~~~~~i~~~Dva~~~~~~l~~~ 211 (313)
T 1qyd_A 187 DGNVKGIWVDEDDVGTYTIKSIDDP 211 (313)
T ss_dssp TSCSEEEEECHHHHHHHHHHHTTCG
T ss_pred CCCceEEEEEHHHHHHHHHHHHhCc
Confidence 0245889999999988764
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=99.50 E-value=9.1e-14 Score=117.83 Aligned_cols=180 Identities=13% Similarity=0.122 Sum_probs=116.1
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCc------hhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHH
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNK------DKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFK 74 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~ 74 (248)
||+++||||+|+||++++++|+++| ++|++++|+. ++.+.+.++. ...+.++++|++|.++ +..+++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g----~~V~~~~R~~~~~~~~~~~~~l~~~~--~~~v~~v~~D~~d~~~-l~~a~~ 76 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSFS----HPTFIYARPLTPDSTPSSVQLREEFR--SMGVTIIEGEMEEHEK-MVSVLK 76 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTT----CCEEEEECCCCTTCCHHHHHHHHHHH--HTTCEEEECCTTCHHH-HHHHHT
T ss_pred ccEEEEEcCCchhHHHHHHHHHhCC----CcEEEEECCcccccChHHHHHHHHhh--cCCcEEEEecCCCHHH-HHHHHc
Confidence 6789999999999999999999999 8999999986 2222222222 3468899999999877 554432
Q ss_pred HhhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCC-CceEEEe
Q psy11190 75 DISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSS-RAAIVNV 153 (248)
Q Consensus 75 ~i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~-~~~iv~v 153 (248)
++|+|||+++... +.+.. .+++.+.+. + -.+||
T Consensus 77 ---------~~d~vi~~a~~~~--------------------~~~~~----~l~~aa~~~-----------g~v~~~v-- 110 (321)
T 3c1o_A 77 ---------QVDIVISALPFPM--------------------ISSQI----HIINAIKAA-----------GNIKRFL-- 110 (321)
T ss_dssp ---------TCSEEEECCCGGG--------------------SGGGH----HHHHHHHHH-----------CCCCEEE--
T ss_pred ---------CCCEEEECCCccc--------------------hhhHH----HHHHHHHHh-----------CCccEEe--
Confidence 3899999998531 22333 344444443 3 45676
Q ss_pred ecCCCcccccCC---CCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCC-----------CCCC-------
Q psy11190 154 SSIMGSIEDNTQ---GGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM-----------GGSN------- 212 (248)
Q Consensus 154 ss~~~~~~~~~~---~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~-----------~~~~------- 212 (248)
.|..+....... +....| .+|.+++.+++. .+++++.+.||++..++ ....
T Consensus 111 ~S~~g~~~~~~~~~~p~~~~y-~sK~~~e~~~~~-------~~~~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (321)
T 3c1o_A 111 PSDFGCEEDRIKPLPPFESVL-EKKRIIRRAIEA-------AALPYTYVSANCFGAYFVNYLLHPSPHPNRNDDIVIYGT 182 (321)
T ss_dssp CSCCSSCGGGCCCCHHHHHHH-HHHHHHHHHHHH-------HTCCBEEEECCEEHHHHHHHHHCCCSSCCTTSCEEEETT
T ss_pred ccccccCccccccCCCcchHH-HHHHHHHHHHHH-------cCCCeEEEEeceeccccccccccccccccccCceEEecC
Confidence 344442111000 113468 999999988863 25777788888764421 0000
Q ss_pred -----CCCchhhHHHHHHHHhhhcccccccceeeeC
Q psy11190 213 -----APLEVGAATAGIIQFIQSLGEAHNGGFFEYT 243 (248)
Q Consensus 213 -----~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 243 (248)
....++++++.++..+..+. ..|+.+...
T Consensus 183 ~~~~~~~i~~~Dva~~~~~~l~~~~--~~g~~~~~~ 216 (321)
T 3c1o_A 183 GETKFVLNYEEDIAKYTIKVACDPR--CCNRIVIYR 216 (321)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHCGG--GTTEEEECC
T ss_pred CCcceeEeeHHHHHHHHHHHHhCcc--ccCeEEEEe
Confidence 02468999999999887643 234444443
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.47 E-value=3.8e-13 Score=113.15 Aligned_cols=170 Identities=16% Similarity=0.177 Sum_probs=110.9
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchh------HHHHHHHHhhcCCceeEEeeccCCchhhhhHHH
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDK------AVELLALAQQHSNLHVIELDVTDFSKQQDVLFK 74 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~------~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~ 74 (248)
||+++||||||+||++++++|+++| ++|++++|+... ...+..+ ....+.++++|++|.++ +..+++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g----~~V~~l~R~~~~~~~~~~~~~~~~l--~~~~v~~v~~D~~d~~~-l~~~~~ 76 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLG----HPTFLLVRESTASSNSEKAQLLESF--KASGANIVHGSIDDHAS-LVEAVK 76 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTT----CCEEEECCCCCTTTTHHHHHHHHHH--HTTTCEEECCCTTCHHH-HHHHHH
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCC----CCEEEEECCcccccCHHHHHHHHHH--HhCCCEEEEeccCCHHH-HHHHHc
Confidence 5789999999999999999999999 899999998532 2222222 24578899999999877 554432
Q ss_pred HhhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCC-CceEEEe
Q psy11190 75 DISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSS-RAAIVNV 153 (248)
Q Consensus 75 ~i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~-~~~iv~v 153 (248)
++|+|||+++... +.+..+ +++.+++. + -.++|+
T Consensus 77 ---------~~d~vi~~a~~~~--------------------~~~~~~----l~~aa~~~-----------g~v~~~v~- 111 (308)
T 1qyc_A 77 ---------NVDVVISTVGSLQ--------------------IESQVN----IIKAIKEV-----------GTVKRFFP- 111 (308)
T ss_dssp ---------TCSEEEECCCGGG--------------------SGGGHH----HHHHHHHH-----------CCCSEEEC-
T ss_pred ---------CCCEEEECCcchh--------------------hhhHHH----HHHHHHhc-----------CCCceEee-
Confidence 3899999998531 223333 34444443 3 456763
Q ss_pred ecCCCccccc---CCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC---------C---------
Q psy11190 154 SSIMGSIEDN---TQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS---------N--------- 212 (248)
Q Consensus 154 ss~~~~~~~~---~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~---------~--------- 212 (248)
|..+..... ..+....| .+|.+++.+.+. .+++++.+.||++..++... .
T Consensus 112 -S~~g~~~~~~~~~~p~~~~y-~sK~~~e~~~~~-------~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (308)
T 1qyc_A 112 -SEFGNDVDNVHAVEPAKSVF-EVKAKVRRAIEA-------EGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGD 182 (308)
T ss_dssp -SCCSSCTTSCCCCTTHHHHH-HHHHHHHHHHHH-------HTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETT
T ss_pred -cccccCccccccCCcchhHH-HHHHHHHHHHHh-------cCCCeEEEEeceeccccccccccccccCCCCCceEEecC
Confidence 434321110 01223468 999998887764 25778888998875532110 0
Q ss_pred -----CCCchhhHHHHHHHHhhhc
Q psy11190 213 -----APLEVGAATAGIIQFIQSL 231 (248)
Q Consensus 213 -----~~~~~~~~~~~~~~~~~~~ 231 (248)
....++++++.++..+..+
T Consensus 183 ~~~~~~~i~~~Dva~~~~~~l~~~ 206 (308)
T 1qyc_A 183 GNARVVFVKEEDIGTFTIKAVDDP 206 (308)
T ss_dssp SCCEEEEECHHHHHHHHHTTSSCG
T ss_pred CCceEEEecHHHHHHHHHHHHhCc
Confidence 0235688999988887653
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=99.47 E-value=1.9e-13 Score=115.74 Aligned_cols=170 Identities=17% Similarity=0.108 Sum_probs=111.8
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCch-hHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKD-KAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
||+++||||+|+||++++++|+++| ++|++++|+.+ ....+.++. ...+.++++|++|.++ +..+++
T Consensus 11 ~~~ilVtGatG~iG~~l~~~L~~~g----~~V~~l~R~~~~~~~~~~~l~--~~~v~~v~~Dl~d~~~-l~~a~~----- 78 (318)
T 2r6j_A 11 KSKILIFGGTGYIGNHMVKGSLKLG----HPTYVFTRPNSSKTTLLDEFQ--SLGAIIVKGELDEHEK-LVELMK----- 78 (318)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTT----CCEEEEECTTCSCHHHHHHHH--HTTCEEEECCTTCHHH-HHHHHT-----
T ss_pred CCeEEEECCCchHHHHHHHHHHHCC----CcEEEEECCCCchhhHHHHhh--cCCCEEEEecCCCHHH-HHHHHc-----
Confidence 3589999999999999999999999 89999999875 333333332 3468899999999877 554432
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCC-CceEEEeecCCC
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSS-RAAIVNVSSIMG 158 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~-~~~iv~vss~~~ 158 (248)
++|+|||+++... +.+. +.+++.+++. + -.++|+ |..+
T Consensus 79 ----~~d~vi~~a~~~~--------------------~~~~----~~l~~aa~~~-----------g~v~~~v~--S~~g 117 (318)
T 2r6j_A 79 ----KVDVVISALAFPQ--------------------ILDQ----FKILEAIKVA-----------GNIKRFLP--SDFG 117 (318)
T ss_dssp ----TCSEEEECCCGGG--------------------STTH----HHHHHHHHHH-----------CCCCEEEC--SCCS
T ss_pred ----CCCEEEECCchhh--------------------hHHH----HHHHHHHHhc-----------CCCCEEEe--eccc
Confidence 3999999998531 2233 3444444443 3 456763 4333
Q ss_pred cccccCC---CCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCC--------CCC------------CCC
Q psy11190 159 SIEDNTQ---GGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMG--------GSN------------APL 215 (248)
Q Consensus 159 ~~~~~~~---~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~--------~~~------------~~~ 215 (248)
....... +....| .+|.+++.+.+. .+++++.+.||++..++. ... ...
T Consensus 118 ~~~~~~~~~~p~~~~y-~sK~~~e~~~~~-------~~~~~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 189 (318)
T 2r6j_A 118 VEEDRINALPPFEALI-ERKRMIRRAIEE-------ANIPYTYVSANCFASYFINYLLRPYDPKDEITVYGTGEAKFAMN 189 (318)
T ss_dssp SCTTTCCCCHHHHHHH-HHHHHHHHHHHH-------TTCCBEEEECCEEHHHHHHHHHCTTCCCSEEEEETTSCCEEEEE
T ss_pred cCcccccCCCCcchhH-HHHHHHHHHHHh-------cCCCeEEEEcceehhhhhhhhccccCCCCceEEecCCCceeeEe
Confidence 2111000 113468 999998887753 367788888887644210 000 124
Q ss_pred chhhHHHHHHHHhhhc
Q psy11190 216 EVGAATAGIIQFIQSL 231 (248)
Q Consensus 216 ~~~~~~~~~~~~~~~~ 231 (248)
.++++++.++..+..+
T Consensus 190 ~~~Dva~~~~~~l~~~ 205 (318)
T 2r6j_A 190 YEQDIGLYTIKVATDP 205 (318)
T ss_dssp CHHHHHHHHHHHTTCG
T ss_pred eHHHHHHHHHHHhcCc
Confidence 6899999999988764
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=99.38 E-value=8.1e-13 Score=113.64 Aligned_cols=164 Identities=10% Similarity=0.091 Sum_probs=109.5
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCC-CCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGN-NQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~-~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|++|||||+|+||++++++|+++|. ...++|++++|+..... ....++.++.+|++|.++ +..+++.+.
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~------~~~~~~~~~~~Dl~d~~~-~~~~~~~~~--- 71 (364)
T 2v6g_A 2 SVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW------HEDNPINYVQCDISDPDD-SQAKLSPLT--- 71 (364)
T ss_dssp EEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC------CCSSCCEEEECCTTSHHH-HHHHHTTCT---
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc------cccCceEEEEeecCCHHH-HHHHHhcCC---
Confidence 5799999999999999999998760 00058999999876532 123578899999999877 665544321
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEE-------Ee
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIV-------NV 153 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv-------~v 153 (248)
++|+|||+|+... ++.+..+++|+.++.++++++.+... +-.++| ++
T Consensus 72 ---~~d~vih~a~~~~----------~~~~~~~~~n~~~~~~l~~a~~~~~~-------------~~~~~v~~~g~~i~~ 125 (364)
T 2v6g_A 72 ---DVTHVFYVTWANR----------STEQENCEANSKMFRNVLDAVIPNCP-------------NLKHISLQTGRKHYM 125 (364)
T ss_dssp ---TCCEEEECCCCCC----------SSHHHHHHHHHHHHHHHHHHHTTTCT-------------TCCEEEEECCTHHHH
T ss_pred ---CCCEEEECCCCCc----------chHHHHHHHhHHHHHHHHHHHHHhcc-------------ccceEEeccCceEEE
Confidence 2999999998642 23566778899999999988766421 133565 67
Q ss_pred ecCCCcccc-------c----CCCCCccchhhHHHHHHHHHHHHhhccCCC-eEEEEecCcceecCC
Q psy11190 154 SSIMGSIED-------N----TQGGFHPYRCSKAALNAATRSLSIDLKGDK-IIATAMHPGWVKTDM 208 (248)
Q Consensus 154 ss~~~~~~~-------~----~~~~~~~y~~sK~a~~~~~~~la~e~~~~~-i~v~~v~PG~v~t~~ 208 (248)
||...+... . ..+....| .+.+.+++.++. .++ ++++.+.|+.+..+.
T Consensus 126 Ss~~vyg~~~~~~~~~~E~~~~~~~~~~y----~~~E~~~~~~~~---~~~~~~~~ilRp~~v~G~~ 185 (364)
T 2v6g_A 126 GPFESYGKIESHDPPYTEDLPRLKYMNFY----YDLEDIMLEEVE---KKEGLTWSVHRPGNIFGFS 185 (364)
T ss_dssp CCGGGTTTSCCCCSSBCTTSCCCSSCCHH----HHHHHHHHHHHT---TSTTCEEEEEEESSEECCC
T ss_pred echhhccccccCCCCCCccccCCccchhh----HHHHHHHHHHhh---cCCCceEEEECCCceeCCC
Confidence 776432111 0 00112235 234555554442 245 999999999998764
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* | Back alignment and structure |
|---|
Probab=99.34 E-value=1.1e-12 Score=110.00 Aligned_cols=107 Identities=17% Similarity=0.193 Sum_probs=80.9
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|+++||||+||||+++++.|+++| +.|++++|+.++++++.+.......+.++.+|+++.++ ++.++ .
T Consensus 120 k~vlVtGaaGGiG~aia~~L~~~G----~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~-~~~~~-------~ 187 (287)
T 1lu9_A 120 KKAVVLAGTGPVGMRSAALLAGEG----AEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDAS-RAEAV-------K 187 (287)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTT----CEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHH-HHHHT-------T
T ss_pred CEEEEECCCcHHHHHHHHHHHHCc----CEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHH-HHHHH-------H
Confidence 689999999999999999999999 78999999988887775443322356788899998776 44432 2
Q ss_pred CCCccEEEeccccCCccccCCCCCh-hhhhheeeecchhhHH
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKP-EQMTDHFLVNVTAPLM 122 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~-~~~~~~~~~n~~~~~~ 122 (248)
.+|+||||||......+..+.+. ++++..+++|+.+.+.
T Consensus 188 --~~DvlVn~ag~g~~~~~~~~~~~~~~~~~~~dvn~~~~~~ 227 (287)
T 1lu9_A 188 --GAHFVFTAGAIGLELLPQAAWQNESSIEIVADYNAQPPLG 227 (287)
T ss_dssp --TCSEEEECCCTTCCSBCHHHHTTCTTCCEEEECCCSSSCS
T ss_pred --hCCEEEECCCccccCCChhHcCchHHHHHHHHhhhhhhHH
Confidence 28999999985422122323343 7788899999999883
|
| >4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.31 E-value=2e-11 Score=102.32 Aligned_cols=179 Identities=18% Similarity=0.196 Sum_probs=108.3
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|| +|||||||.||++++++|+++| +.|+++.|+++.. -+..|..+ .+.+
T Consensus 1 Mk-ILVTGatGfIG~~L~~~L~~~G----~~V~~l~R~~~~~--------------~~~~~~~~------------~~~l 49 (298)
T 4b4o_A 1 MR-VLVGGGTGFIGTALTQLLNARG----HEVTLVSRKPGPG--------------RITWDELA------------ASGL 49 (298)
T ss_dssp CE-EEEETTTSHHHHHHHHHHHHTT----CEEEEEESSCCTT--------------EEEHHHHH------------HHCC
T ss_pred CE-EEEECCCCHHHHHHHHHHHHCC----CEEEEEECCCCcC--------------eeecchhh------------Hhhc
Confidence 76 9999999999999999999999 9999999976431 11122111 1112
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
. ++|.+||.|+.... ......+.+..+..++.|+.++-++.+.+. ..+ .+..++|+.||...+.
T Consensus 50 ~--~~d~vihla~~~i~-~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~----~~~---------~~~~~~i~~Ss~~vyg 113 (298)
T 4b4o_A 50 P--SCDAAVNLAGENIL-NPLRRWNETFQKEVLGSRLETTQLLAKAIT----KAP---------QPPKAWVLVTGVAYYQ 113 (298)
T ss_dssp C--SCSEEEECCCCCSS-CTTSCCCHHHHHHHHHHHHHHHHHHHHHHH----HCS---------SCCSEEEEEEEGGGSC
T ss_pred c--CCCEEEEeccCccc-chhhhhhhhhhhhhhhHHHHHHHHHHHHHH----HhC---------CCceEEEEEeeeeeec
Confidence 2 49999999985422 233333555566677777766666555433 221 1344567777655432
Q ss_pred ccc--------CCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC---------------------
Q psy11190 161 EDN--------TQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS--------------------- 211 (248)
Q Consensus 161 ~~~--------~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~--------------------- 211 (248)
... +..+...|+..+...+. .......++++..+.||.+..|-...
T Consensus 114 ~~~~~~~~E~~p~~~~~~~~~~~~~~e~-----~~~~~~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~g~g~~ 188 (298)
T 4b4o_A 114 PSLTAEYDEDSPGGDFDFFSNLVTKWEA-----AARLPGDSTRQVVVRSGVVLGRGGGAMGHMLLPFRLGLGGPIGSGHQ 188 (298)
T ss_dssp CCSSCCBCTTCCCSCSSHHHHHHHHHHH-----HHCCSSSSSEEEEEEECEEECTTSHHHHHHHHHHHTTCCCCBTTSCS
T ss_pred CCCCCcccccCCccccchhHHHHHHHHH-----HHHhhccCCceeeeeeeeEEcCCCCchhHHHHHHhcCCcceecccCc
Confidence 221 01112234444433332 22334678999999999988763110
Q ss_pred -CCCCchhhHHHHHHHHhhhc
Q psy11190 212 -NAPLEVGAATAGIIQFIQSL 231 (248)
Q Consensus 212 -~~~~~~~~~~~~~~~~~~~~ 231 (248)
......+++++.++..+..+
T Consensus 189 ~~~~ihv~Dva~a~~~~~~~~ 209 (298)
T 4b4o_A 189 FFPWIHIGDLAGILTHALEAN 209 (298)
T ss_dssp BCCEEEHHHHHHHHHHHHHCT
T ss_pred eeecCcHHHHHHHHHHHHhCC
Confidence 01245789999998888763
|
| >1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A* | Back alignment and structure |
|---|
Probab=99.10 E-value=2.4e-10 Score=97.33 Aligned_cols=154 Identities=11% Similarity=0.072 Sum_probs=97.8
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCC---CCceEEEeecCch--hHHHH-HHHHhhcCCceeEEeeccCCchhhhhHHHHh
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNN---QPAHIFATCRNKD--KAVEL-LALAQQHSNLHVIELDVTDFSKQQDVLFKDI 76 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~---~~~~V~~~~r~~~--~~~~~-~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i 76 (248)
+++||||+|.||.+++..|+++|.. ....|++++++.. +.+.. .++. ...+.++ .|+.+... ...
T Consensus 6 kVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~--~~~~~~~-~di~~~~~-~~~----- 76 (327)
T 1y7t_A 6 RVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELE--DCAFPLL-AGLEATDD-PKV----- 76 (327)
T ss_dssp EEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHH--TTTCTTE-EEEEEESC-HHH-----
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhh--ccccccc-CCeEeccC-hHH-----
Confidence 6999999999999999999998820 0017999998742 22221 1222 1122233 67776544 222
Q ss_pred hhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecC
Q psy11190 77 SDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSI 156 (248)
Q Consensus 77 ~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~ 156 (248)
.+. ++|+|||.||.... + ..+ ....++.|+.++..+++.+.+.- . ++.+++++|+.
T Consensus 77 --a~~--~~D~Vih~Ag~~~~--~--~~~---~~~~~~~Nv~~t~~l~~a~~~~~-~------------~~~~vvv~snp 132 (327)
T 1y7t_A 77 --AFK--DADYALLVGAAPRK--A--GME---RRDLLQVNGKIFTEQGRALAEVA-K------------KDVKVLVVGNP 132 (327)
T ss_dssp --HTT--TCSEEEECCCCCCC--T--TCC---HHHHHHHHHHHHHHHHHHHHHHS-C------------TTCEEEECSSS
T ss_pred --HhC--CCCEEEECCCcCCC--C--CCC---HHHHHHHHHHHHHHHHHHHHhhc-C------------CCeEEEEeCCc
Confidence 222 39999999997542 1 122 34567778888888877766541 0 24678888886
Q ss_pred CCccc-----cc-CCCCCccchhhHHHHHHHHHHHHhhc
Q psy11190 157 MGSIE-----DN-TQGGFHPYRCSKAALNAATRSLSIDL 189 (248)
Q Consensus 157 ~~~~~-----~~-~~~~~~~y~~sK~a~~~~~~~la~e~ 189 (248)
..... .. +.++...|+.+|...+.+...++..+
T Consensus 133 ~~~~~~~~~~~~~~~~p~~~yg~tkl~~er~~~~~a~~~ 171 (327)
T 1y7t_A 133 ANTNALIAYKNAPGLNPRNFTAMTRLDHNRAKAQLAKKT 171 (327)
T ss_dssp HHHHHHHHHHTCTTSCGGGEEECCHHHHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHcCCCChhheeccchHHHHHHHHHHHHHh
Confidence 52110 01 12445679999999999888888764
|
| >1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A* | Back alignment and structure |
|---|
Probab=99.09 E-value=6.7e-11 Score=94.97 Aligned_cols=177 Identities=11% Similarity=0.049 Sum_probs=102.4
Q ss_pred ceEEEecC----------------CCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCC
Q psy11190 2 KSILITGC----------------NRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDF 65 (248)
Q Consensus 2 k~~lVtGa----------------s~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 65 (248)
|++||||| |||||+++|+.|+++| +.|++++++.. +. .... .-.+|++
T Consensus 9 k~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~G----a~V~l~~~~~~-l~-------~~~g--~~~~dv~-- 72 (226)
T 1u7z_A 9 LNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRG----ANVTLVSGPVS-LP-------TPPF--VKRVDVM-- 72 (226)
T ss_dssp CEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTT----CEEEEEECSCC-CC-------CCTT--EEEEECC--
T ss_pred CEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCC----CEEEEEECCcc-cc-------cCCC--CeEEccC--
Confidence 78999999 6899999999999999 89999887652 11 0111 1234554
Q ss_pred chhhhhHHHHhhhhhcCCCccEEEeccccCCccccCCCCChhhhhhe--eeecchhhHHHHHHHhHHHHhhhhcccCCCC
Q psy11190 66 SKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDH--FLVNVTAPLMLTKTMLPLLKKASEANSAAPL 143 (248)
Q Consensus 66 ~~~v~~~~~~i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~--~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~ 143 (248)
+ .+.+++.+.+.++ ++|++|||||+... .++. .+.+.+.+. -..++.-.+.....+++.+.+..
T Consensus 73 -~-~~~~~~~v~~~~~--~~Dili~~Aav~d~-~p~~-~~~~KIkk~~~~~~~l~l~L~~~pdIL~~l~~~~-------- 138 (226)
T 1u7z_A 73 -T-ALEMEAAVNASVQ--QQNIFIGCAAVADY-RAAT-VAPEKIKKQATQGDELTIKMVKNPDIVAGVAALK-------- 138 (226)
T ss_dssp -S-HHHHHHHHHHHGG--GCSEEEECCBCCSE-EESS-CCSSCC-------CEEEEEEEECCCHHHHHHHCS--------
T ss_pred -c-HHHHHHHHHHhcC--CCCEEEECCcccCC-CCcc-CChHHhccccccCCceEEEEeecHHHHHHHHhhh--------
Confidence 4 6667777888877 49999999998754 4442 233333330 01122223333444555555421
Q ss_pred CCCCceEEEeecCCCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcc-eecCCCCC-----------
Q psy11190 144 GSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGW-VKTDMGGS----------- 211 (248)
Q Consensus 144 ~~~~~~iv~vss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~-v~t~~~~~----------- 211 (248)
..+.+ .|+ + ..+. +.+.+.....+.++|+.+...+|-. ..+++..+
T Consensus 139 --~~~~~-~VG-------F------aaEt------~~l~e~A~~kL~~k~~d~ivaN~~~~~~~~f~~~~n~v~li~~~~ 196 (226)
T 1u7z_A 139 --DHRPY-VVG-------F------AAET------NNVEEYARQKRIRKNLDLICANDVSQPTQGFNSDNNALHLFWQDG 196 (226)
T ss_dssp --SSCCE-EEE-------E------EEES------SSHHHHHHHHHHHHTCSEEEEEECSSTTSSTTSSEEEEEEEETTE
T ss_pred --cCCcE-EEE-------c------chhh------chHHHHHHHHHHhcCCCEEEEeeccccCCccCCCceEEEEEeCCC
Confidence 12222 111 1 1111 2255566666666777666666554 22333222
Q ss_pred ---CCCCchhhHHHHHHHHhhh
Q psy11190 212 ---NAPLEVGAATAGIIQFIQS 230 (248)
Q Consensus 212 ---~~~~~~~~~~~~~~~~~~~ 230 (248)
.+..+.+++++.++..+..
T Consensus 197 ~~~~~~~sK~~vA~~I~~~i~~ 218 (226)
T 1u7z_A 197 DKVLPLERKELLGQLLLDEIVT 218 (226)
T ss_dssp EEEEEEEEHHHHHHHHHHHHHH
T ss_pred cEecCCCCHHHHHHHHHHHHHH
Confidence 1235688999999888754
|
| >4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes} | Back alignment and structure |
|---|
Probab=98.76 E-value=2.6e-08 Score=87.24 Aligned_cols=84 Identities=17% Similarity=0.225 Sum_probs=67.0
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCC-ceEEEeecCchhHHHHHHHHhhc--CCceeEEeeccCCchhhhhHHHHhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQP-AHIFATCRNKDKAVELLALAQQH--SNLHVIELDVTDFSKQQDVLFKDIS 77 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~-~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~v~~~~~~i~ 77 (248)
|++++|+|| |+||+++++.|+++|. . ..|++.+|+.++++++.+..... .++.++.+|++|.++ ++++++..
T Consensus 1 M~kVlIiGa-GgiG~~ia~~L~~~g~--~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~-l~~~l~~~- 75 (405)
T 4ina_A 1 MAKVLQIGA-GGVGGVVAHKMAMNRE--VFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEE-LVALINEV- 75 (405)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHTCTT--TCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHH-HHHHHHHH-
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCC--CceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHH-HHHHHHhh-
Confidence 789999999 8999999999999882 1 28999999999988875544322 368889999999888 77776654
Q ss_pred hhhcCCCccEEEeccccC
Q psy11190 78 DVVKDQGLNVLVNNAGIA 95 (248)
Q Consensus 78 ~~~~~~~iD~lv~~ag~~ 95 (248)
++|+|||+++..
T Consensus 76 ------~~DvVin~ag~~ 87 (405)
T 4ina_A 76 ------KPQIVLNIALPY 87 (405)
T ss_dssp ------CCSEEEECSCGG
T ss_pred ------CCCEEEECCCcc
Confidence 289999999854
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
Probab=98.74 E-value=3.8e-08 Score=70.35 Aligned_cols=74 Identities=14% Similarity=0.146 Sum_probs=58.7
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|++++|+|+ |++|+++++.|.++|. ++|++++|++++++.+. ...+.++.+|+++.++ +..++
T Consensus 5 ~~~v~I~G~-G~iG~~~~~~l~~~g~---~~v~~~~r~~~~~~~~~-----~~~~~~~~~d~~~~~~-~~~~~------- 67 (118)
T 3ic5_A 5 RWNICVVGA-GKIGQMIAALLKTSSN---YSVTVADHDLAALAVLN-----RMGVATKQVDAKDEAG-LAKAL------- 67 (118)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHHCSS---EEEEEEESCHHHHHHHH-----TTTCEEEECCTTCHHH-HHHHT-------
T ss_pred cCeEEEECC-CHHHHHHHHHHHhCCC---ceEEEEeCCHHHHHHHH-----hCCCcEEEecCCCHHH-HHHHH-------
Confidence 468999999 9999999999999884 78999999987766543 3456778899988766 44432
Q ss_pred cCCCccEEEeccc
Q psy11190 81 KDQGLNVLVNNAG 93 (248)
Q Consensus 81 ~~~~iD~lv~~ag 93 (248)
. ++|++|++++
T Consensus 68 ~--~~d~vi~~~~ 78 (118)
T 3ic5_A 68 G--GFDAVISAAP 78 (118)
T ss_dssp T--TCSEEEECSC
T ss_pred c--CCCEEEECCC
Confidence 2 3999999985
|
| >2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=98.74 E-value=1e-08 Score=82.46 Aligned_cols=78 Identities=18% Similarity=0.326 Sum_probs=60.4
Q ss_pred ceEEEecC----------------CCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCC
Q psy11190 2 KSILITGC----------------NRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDF 65 (248)
Q Consensus 2 k~~lVtGa----------------s~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 65 (248)
|++||||| ||++|.++|+.|+++| +.|++++|+...... ... .+|+.+.
T Consensus 4 k~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~G----a~V~lv~~~~~~~~~------~~~-----~~~~~~v 68 (232)
T 2gk4_A 4 MKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAG----YEVCLITTKRALKPE------PHP-----NLSIREI 68 (232)
T ss_dssp CEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTT----CEEEEEECTTSCCCC------CCT-----TEEEEEC
T ss_pred CEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCC----CEEEEEeCCcccccc------CCC-----CeEEEEH
Confidence 78999999 7779999999999999 899999997532000 001 2355555
Q ss_pred chhhhhHHHHhhhhhcCCCccEEEeccccCCc
Q psy11190 66 SKQQDVLFKDISDVVKDQGLNVLVNNAGIAAK 97 (248)
Q Consensus 66 ~~~v~~~~~~i~~~~~~~~iD~lv~~ag~~~~ 97 (248)
++ +..+++.+.+.++ ++|++|+||++...
T Consensus 69 ~s-~~em~~~v~~~~~--~~Dili~aAAvsD~ 97 (232)
T 2gk4_A 69 TN-TKDLLIEMQERVQ--DYQVLIHSMAVSDY 97 (232)
T ss_dssp CS-HHHHHHHHHHHGG--GCSEEEECSBCCSE
T ss_pred hH-HHHHHHHHHHhcC--CCCEEEEcCccccc
Confidence 66 8888888888887 49999999998764
|
| >2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A* | Back alignment and structure |
|---|
Probab=98.57 E-value=1.1e-07 Score=85.82 Aligned_cols=104 Identities=22% Similarity=0.262 Sum_probs=70.7
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|+++|||| ||+|++++..|+++| ++|++++|+.++++++.+... ..+ .++.+ +. + ++
T Consensus 365 k~vlV~Ga-GGig~aia~~L~~~G----~~V~i~~R~~~~a~~la~~~~--~~~----~~~~d----l~-------~-~~ 421 (523)
T 2o7s_A 365 KTVVVIGA-GGAGKALAYGAKEKG----AKVVIANRTYERALELAEAIG--GKA----LSLTD----LD-------N-YH 421 (523)
T ss_dssp -CEEEECC-SHHHHHHHHHHHHHC----C-CEEEESSHHHHHHHHHHTT--C-C----EETTT----TT-------T-C-
T ss_pred CEEEEECC-cHHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHHcC--Cce----eeHHH----hh-------h-cc
Confidence 57999999 599999999999999 789999999888777754431 111 12222 11 1 11
Q ss_pred CCCccEEEeccccCCcc----ccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhh
Q psy11190 82 DQGLNVLVNNAGIAAKF----TRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKA 134 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~ 134 (248)
...+|+||||+|..... .++.+.+.+.+...+++|+.+.. .|+|+..
T Consensus 422 ~~~~DilVN~agvg~~~~~~~~~~~~~~~~~~~~v~Dvny~p~~------T~ll~~a 472 (523)
T 2o7s_A 422 PEDGMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPRI------TRLLREA 472 (523)
T ss_dssp -CCSEEEEECSSTTCTTCTTCCSSCTTTGGGEEEEEECCCSSSS------CHHHHHH
T ss_pred ccCceEEEECCCCCCCCCCCCCCCChHHcCcCcEEEEEeeCCcc------CHHHHHH
Confidence 11489999999974321 34556677889999999998764 2556554
|
| >3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A* | Back alignment and structure |
|---|
Probab=98.53 E-value=7.2e-10 Score=98.15 Aligned_cols=39 Identities=23% Similarity=0.302 Sum_probs=34.7
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL 45 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~ 45 (248)
|+++|||++ +||+++|+.|...| ++|+++++++.++.+.
T Consensus 266 KtVvVtGaG-gIG~aiA~~Laa~G----A~Viv~D~~~~~a~~A 304 (488)
T 3ond_A 266 KVAVVAGYG-DVGKGCAAALKQAG----ARVIVTEIDPICALQA 304 (488)
T ss_dssp CEEEEECCS-HHHHHHHHHHHHTT----CEEEEECSCHHHHHHH
T ss_pred CEEEEECCC-HHHHHHHHHHHHCC----CEEEEEcCCHHHHHHH
Confidence 789999987 99999999999999 8999999988765544
|
| >3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A* | Back alignment and structure |
|---|
Probab=98.45 E-value=1.8e-07 Score=71.05 Aligned_cols=77 Identities=12% Similarity=0.053 Sum_probs=60.1
Q ss_pred CchhHHHHHHHHhCCCCCCceEEEeecCchhHH---HHHH-HHhhcCCceeEEeeccCC--chhhhhHHHHhhhhhcCCC
Q psy11190 11 RGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAV---ELLA-LAQQHSNLHVIELDVTDF--SKQQDVLFKDISDVVKDQG 84 (248)
Q Consensus 11 ~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~---~~~~-~~~~~~~~~~~~~D~~~~--~~~v~~~~~~i~~~~~~~~ 84 (248)
+-++.++++.|++.| ++|++..|+.+... +..+ ....+.+...+++|++++ ++ ++++++.+.+.+| +
T Consensus 26 ~~p~~a~a~~La~~G----a~vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~Dv~~~~~~~-v~~~~~~i~~~~G--~ 98 (157)
T 3gxh_A 26 GLPNEQQFSLLKQAG----VDVVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPVDWQNPKVED-VEAFFAAMDQHKG--K 98 (157)
T ss_dssp BCCCHHHHHHHHHTT----CCEEEECSCTTSTTSCTTHHHHHHHTTCEEEECCCCTTSCCHHH-HHHHHHHHHHTTT--S
T ss_pred CCCCHHHHHHHHHcC----CCEEEECCCcccccccccHHHHHHHcCCeEEEecCCCCCCCHHH-HHHHHHHHHhcCC--C
Confidence 457899999999999 89999888655432 1222 223345678889999999 88 9999999998877 6
Q ss_pred ccEEEeccccC
Q psy11190 85 LNVLVNNAGIA 95 (248)
Q Consensus 85 iD~lv~~ag~~ 95 (248)
|+||||||+.
T Consensus 99 -dVLVnnAgg~ 108 (157)
T 3gxh_A 99 -DVLVHCLANY 108 (157)
T ss_dssp -CEEEECSBSH
T ss_pred -CEEEECCCCC
Confidence 9999999975
|
| >2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.40 E-value=6.8e-07 Score=76.43 Aligned_cols=78 Identities=15% Similarity=0.163 Sum_probs=57.6
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
+++||+|++||||+.+++.+...| ++|++++++.++.+.+.++ +.. ...|+++.++ +...+.++...
T Consensus 171 ~~vlV~Ga~ggiG~~~~~~a~~~G----a~V~~~~~~~~~~~~~~~~---g~~---~~~d~~~~~~-~~~~~~~~~~~-- 237 (347)
T 2hcy_A 171 HWVAISGAAGGLGSLAVQYAKAMG----YRVLGIDGGEGKEELFRSI---GGE---VFIDFTKEKD-IVGAVLKATDG-- 237 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT----CEEEEEECSTTHHHHHHHT---TCC---EEEETTTCSC-HHHHHHHHHTS--
T ss_pred CEEEEECCCchHHHHHHHHHHHCC----CcEEEEcCCHHHHHHHHHc---CCc---eEEecCccHh-HHHHHHHHhCC--
Confidence 589999999999999999999999 8999999988776544332 111 2358876555 55554444432
Q ss_pred CCCccEEEecccc
Q psy11190 82 DQGLNVLVNNAGI 94 (248)
Q Consensus 82 ~~~iD~lv~~ag~ 94 (248)
++|++|+++|.
T Consensus 238 --~~D~vi~~~g~ 248 (347)
T 2hcy_A 238 --GAHGVINVSVS 248 (347)
T ss_dssp --CEEEEEECSSC
T ss_pred --CCCEEEECCCc
Confidence 49999999983
|
| >1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 | Back alignment and structure |
|---|
Probab=98.37 E-value=6.2e-07 Score=70.34 Aligned_cols=77 Identities=21% Similarity=0.341 Sum_probs=54.7
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
++++||||+||||.++++.+...| ++|++++++.++.+.+.+. + .. ...|.++.+. .+.+.+...
T Consensus 40 ~~vlV~Ga~ggiG~~~~~~~~~~G----~~V~~~~~~~~~~~~~~~~---g--~~-~~~d~~~~~~-~~~~~~~~~---- 104 (198)
T 1pqw_A 40 ERVLIHSATGGVGMAAVSIAKMIG----ARIYTTAGSDAKREMLSRL---G--VE-YVGDSRSVDF-ADEILELTD---- 104 (198)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHHT----CEEEEEESSHHHHHHHHTT---C--CS-EEEETTCSTH-HHHHHHHTT----
T ss_pred CEEEEeeCCChHHHHHHHHHHHcC----CEEEEEeCCHHHHHHHHHc---C--CC-EEeeCCcHHH-HHHHHHHhC----
Confidence 589999999999999999999999 8999999987765544221 1 11 2357776544 444333222
Q ss_pred CCCccEEEeccc
Q psy11190 82 DQGLNVLVNNAG 93 (248)
Q Consensus 82 ~~~iD~lv~~ag 93 (248)
..++|++|+|+|
T Consensus 105 ~~~~D~vi~~~g 116 (198)
T 1pqw_A 105 GYGVDVVLNSLA 116 (198)
T ss_dssp TCCEEEEEECCC
T ss_pred CCCCeEEEECCc
Confidence 125999999987
|
| >1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* | Back alignment and structure |
|---|
Probab=98.33 E-value=1.3e-06 Score=74.16 Aligned_cols=77 Identities=13% Similarity=0.232 Sum_probs=57.0
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
++++||||+||||.++++.+...| ++|++++++.++++.+.++ +. ...+|.++.++ +...+.++..
T Consensus 147 ~~vlV~Ga~ggiG~~~~~~~~~~G----~~V~~~~~~~~~~~~~~~~---g~---~~~~d~~~~~~-~~~~~~~~~~--- 212 (333)
T 1v3u_A 147 ETVLVSAAAGAVGSVVGQIAKLKG----CKVVGAAGSDEKIAYLKQI---GF---DAAFNYKTVNS-LEEALKKASP--- 212 (333)
T ss_dssp CEEEEESTTBHHHHHHHHHHHHTT----CEEEEEESSHHHHHHHHHT---TC---SEEEETTSCSC-HHHHHHHHCT---
T ss_pred CEEEEecCCCcHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHhc---CC---cEEEecCCHHH-HHHHHHHHhC---
Confidence 589999999999999999999999 8999999988776655222 11 13368877445 4444444432
Q ss_pred CCCccEEEeccc
Q psy11190 82 DQGLNVLVNNAG 93 (248)
Q Consensus 82 ~~~iD~lv~~ag 93 (248)
+++|++|+|+|
T Consensus 213 -~~~d~vi~~~g 223 (333)
T 1v3u_A 213 -DGYDCYFDNVG 223 (333)
T ss_dssp -TCEEEEEESSC
T ss_pred -CCCeEEEECCC
Confidence 25999999998
|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A | Back alignment and structure |
|---|
Probab=98.32 E-value=6.5e-07 Score=79.33 Aligned_cols=77 Identities=23% Similarity=0.280 Sum_probs=58.3
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
||+++|+| +|++|+++++.|++.| ++|++++|+.++++++.+ ..+.+..+.+|++|.++ +..++
T Consensus 3 ~k~VlViG-aG~iG~~ia~~L~~~G----~~V~v~~R~~~~a~~la~---~~~~~~~~~~Dv~d~~~-l~~~l------- 66 (450)
T 1ff9_A 3 TKSVLMLG-SGFVTRPTLDVLTDSG----IKVTVACRTLESAKKLSA---GVQHSTPISLDVNDDAA-LDAEV------- 66 (450)
T ss_dssp CCEEEEEC-CSTTHHHHHHHHHTTT----CEEEEEESSHHHHHHTTT---TCTTEEEEECCTTCHHH-HHHHH-------
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCc----CEEEEEECCHHHHHHHHH---hcCCceEEEeecCCHHH-HHHHH-------
Confidence 46899997 8999999999999988 889999999876654422 12246678899998766 54443
Q ss_pred cCCCccEEEeccccC
Q psy11190 81 KDQGLNVLVNNAGIA 95 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~ 95 (248)
. ++|+|||+++..
T Consensus 67 ~--~~DvVIn~a~~~ 79 (450)
T 1ff9_A 67 A--KHDLVISLIPYT 79 (450)
T ss_dssp T--TSSEEEECCC--
T ss_pred c--CCcEEEECCccc
Confidence 1 399999999864
|
| >2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.22 E-value=2.8e-06 Score=75.51 Aligned_cols=77 Identities=25% Similarity=0.297 Sum_probs=59.1
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
||+++|+|+ |++|+++++.|++.+. .+|++++|+.++++++.+. ..+.++.+|+++.++ +..++ .
T Consensus 23 ~k~VlIiGA-GgiG~aia~~L~~~~g---~~V~v~~R~~~ka~~la~~----~~~~~~~~D~~d~~~-l~~~l---~--- 87 (467)
T 2axq_A 23 GKNVLLLGS-GFVAQPVIDTLAANDD---INVTVACRTLANAQALAKP----SGSKAISLDVTDDSA-LDKVL---A--- 87 (467)
T ss_dssp CEEEEEECC-STTHHHHHHHHHTSTT---EEEEEEESSHHHHHHHHGG----GTCEEEECCTTCHHH-HHHHH---H---
T ss_pred CCEEEEECC-hHHHHHHHHHHHhCCC---CeEEEEECCHHHHHHHHHh----cCCcEEEEecCCHHH-HHHHH---c---
Confidence 578999997 9999999999999831 8999999998877665322 245677889988666 44432 2
Q ss_pred cCCCccEEEeccccC
Q psy11190 81 KDQGLNVLVNNAGIA 95 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~ 95 (248)
++|+|||+++..
T Consensus 88 ---~~DvVIn~tp~~ 99 (467)
T 2axq_A 88 ---DNDVVISLIPYT 99 (467)
T ss_dssp ---TSSEEEECSCGG
T ss_pred ---CCCEEEECCchh
Confidence 399999999864
|
| >2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=98.18 E-value=2.8e-06 Score=73.34 Aligned_cols=74 Identities=15% Similarity=0.162 Sum_probs=54.3
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
++++|+|+ |+||+.+++.|...| ++|++++|+.++++.+.+... .. +.+|.++.++ +..++ .
T Consensus 167 ~~V~ViGa-G~iG~~~a~~l~~~G----a~V~~~d~~~~~~~~~~~~~g--~~---~~~~~~~~~~-l~~~~---~---- 228 (369)
T 2eez_A 167 ASVVILGG-GTVGTNAAKIALGMG----AQVTILDVNHKRLQYLDDVFG--GR---VITLTATEAN-IKKSV---Q---- 228 (369)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHTT--TS---EEEEECCHHH-HHHHH---H----
T ss_pred CEEEEECC-CHHHHHHHHHHHhCC----CEEEEEECCHHHHHHHHHhcC--ce---EEEecCCHHH-HHHHH---h----
Confidence 58999999 999999999999999 899999999887665543221 12 4567766555 44332 2
Q ss_pred CCCccEEEeccccC
Q psy11190 82 DQGLNVLVNNAGIA 95 (248)
Q Consensus 82 ~~~iD~lv~~ag~~ 95 (248)
+.|++|++++..
T Consensus 229 --~~DvVi~~~g~~ 240 (369)
T 2eez_A 229 --HADLLIGAVLVP 240 (369)
T ss_dssp --HCSEEEECCC--
T ss_pred --CCCEEEECCCCC
Confidence 289999999864
|
| >1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} | Back alignment and structure |
|---|
Probab=98.17 E-value=5.8e-06 Score=70.16 Aligned_cols=78 Identities=21% Similarity=0.290 Sum_probs=56.6
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
++++|+||+||||.++++.+...| ++|++++++.++++.+.++ +.. ...|.++.+. .+.+.+. .+
T Consensus 147 ~~vlV~Ga~ggiG~~~~~~a~~~G----~~Vi~~~~~~~~~~~~~~~---g~~---~~~d~~~~~~-~~~i~~~----~~ 211 (333)
T 1wly_A 147 DYVLIHAAAGGMGHIMVPWARHLG----ATVIGTVSTEEKAETARKL---GCH---HTINYSTQDF-AEVVREI----TG 211 (333)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHTT----CEEEEEESSHHHHHHHHHH---TCS---EEEETTTSCH-HHHHHHH----HT
T ss_pred CEEEEECCccHHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHc---CCC---EEEECCCHHH-HHHHHHH----hC
Confidence 589999999999999999999999 8999999998776655443 111 2357766554 4443332 22
Q ss_pred CCCccEEEecccc
Q psy11190 82 DQGLNVLVNNAGI 94 (248)
Q Consensus 82 ~~~iD~lv~~ag~ 94 (248)
..++|++|+|+|.
T Consensus 212 ~~~~d~vi~~~g~ 224 (333)
T 1wly_A 212 GKGVDVVYDSIGK 224 (333)
T ss_dssp TCCEEEEEECSCT
T ss_pred CCCCeEEEECCcH
Confidence 1259999999984
|
| >1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A | Back alignment and structure |
|---|
Probab=98.17 E-value=8.2e-06 Score=69.32 Aligned_cols=160 Identities=9% Similarity=0.024 Sum_probs=90.2
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCC---CCceEEEeecC----chhHHHH-HHHHhhcCCceeEEeeccCCchhhhhHHH
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNN---QPAHIFATCRN----KDKAVEL-LALAQQHSNLHVIELDVTDFSKQQDVLFK 74 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~---~~~~V~~~~r~----~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~v~~~~~ 74 (248)
+++||||+|.+|..++..|+.+|.- ....|++++++ .++++.. .++.. .. ..+ ..|+....+
T Consensus 7 KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~-~~-~~~-~~~i~~~~~------- 76 (329)
T 1b8p_A 7 RVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDD-CA-FPL-LAGMTAHAD------- 76 (329)
T ss_dssp EEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHT-TT-CTT-EEEEEEESS-------
T ss_pred EEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhh-hc-ccc-cCcEEEecC-------
Confidence 6999999999999999999988820 00279999988 4444432 22322 11 111 245544333
Q ss_pred HhhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEee
Q psy11190 75 DISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVS 154 (248)
Q Consensus 75 ~i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vs 154 (248)
..+.+. +.|++|+.||.... ...+.+ ..+..|+.....+++. +.+.. .++++++++|
T Consensus 77 -~~~al~--~aD~Vi~~ag~~~~----~g~~r~---dl~~~N~~i~~~i~~~----i~~~~---------~p~a~ii~~S 133 (329)
T 1b8p_A 77 -PMTAFK--DADVALLVGARPRG----PGMERK---DLLEANAQIFTVQGKA----IDAVA---------SRNIKVLVVG 133 (329)
T ss_dssp -HHHHTT--TCSEEEECCCCCCC----TTCCHH---HHHHHHHHHHHHHHHH----HHHHS---------CTTCEEEECS
T ss_pred -cHHHhC--CCCEEEEeCCCCCC----CCCCHH---HHHHHHHHHHHHHHHH----HHHhc---------CCCeEEEEcc
Confidence 122222 38999999996532 122333 2344455555444444 44431 0467899999
Q ss_pred cCCCcccc------cCCCCCccchhhHHHHHHHHHHHHhhcc--CCCeE
Q psy11190 155 SIMGSIED------NTQGGFHPYRCSKAALNAATRSLSIDLK--GDKII 195 (248)
Q Consensus 155 s~~~~~~~------~~~~~~~~y~~sK~a~~~~~~~la~e~~--~~~i~ 195 (248)
++...... +..+....|+.++.--..+...++..+. +..|+
T Consensus 134 NPv~~~t~~~~~~~~~~p~~~v~g~t~Ld~~r~~~~la~~lgv~~~~v~ 182 (329)
T 1b8p_A 134 NPANTNAYIAMKSAPSLPAKNFTAMLRLDHNRALSQIAAKTGKPVSSIE 182 (329)
T ss_dssp SSHHHHHHHHHHTCTTSCGGGEEECCHHHHHHHHHHHHHHHTCCGGGEE
T ss_pred CchHHHHHHHHHHcCCCCHHHEEEeecHHHHHHHHHHHHHhCcCHHHce
Confidence 87632111 0113334577777655666667776654 33454
|
| >1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=98.15 E-value=5e-06 Score=70.34 Aligned_cols=77 Identities=18% Similarity=0.206 Sum_probs=56.5
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
++++|+||+||||..+++.+...| ++|+++++++++++.+.++ +.. ...|.++.+. .+.+.+.. +
T Consensus 142 ~~vlV~Ga~ggiG~~~~~~a~~~G----~~V~~~~~~~~~~~~~~~~---g~~---~~~~~~~~~~-~~~~~~~~----~ 206 (327)
T 1qor_A 142 EQFLFHAAAGGVGLIACQWAKALG----AKLIGTVGTAQKAQSALKA---GAW---QVINYREEDL-VERLKEIT----G 206 (327)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHHT----CEEEEEESSHHHHHHHHHH---TCS---EEEETTTSCH-HHHHHHHT----T
T ss_pred CEEEEECCCCHHHHHHHHHHHHcC----CEEEEEeCCHHHHHHHHHc---CCC---EEEECCCccH-HHHHHHHh----C
Confidence 589999999999999999999999 8999999998776655443 111 2357776554 44443322 2
Q ss_pred CCCccEEEeccc
Q psy11190 82 DQGLNVLVNNAG 93 (248)
Q Consensus 82 ~~~iD~lv~~ag 93 (248)
..++|++|+|+|
T Consensus 207 ~~~~D~vi~~~g 218 (327)
T 1qor_A 207 GKKVRVVYDSVG 218 (327)
T ss_dssp TCCEEEEEECSC
T ss_pred CCCceEEEECCc
Confidence 125999999998
|
| >3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.14 E-value=5.5e-06 Score=61.20 Aligned_cols=74 Identities=20% Similarity=0.316 Sum_probs=56.7
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|+.++|+|+ |.+|+.+++.|.++| +.|++++++++..+.+.+ ..+.++.+|.++.+. .+.+
T Consensus 6 ~~~v~I~G~-G~iG~~la~~L~~~g----~~V~~id~~~~~~~~~~~-----~~~~~~~gd~~~~~~-l~~~-------- 66 (141)
T 3llv_A 6 RYEYIVIGS-EAAGVGLVRELTAAG----KKVLAVDKSKEKIELLED-----EGFDAVIADPTDESF-YRSL-------- 66 (141)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHHTT----CCEEEEESCHHHHHHHHH-----TTCEEEECCTTCHHH-HHHS--------
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCC----CeEEEEECCHHHHHHHHH-----CCCcEEECCCCCHHH-HHhC--------
Confidence 467999998 779999999999999 899999999877665532 246778899998766 4332
Q ss_pred cCCCccEEEeccc
Q psy11190 81 KDQGLNVLVNNAG 93 (248)
Q Consensus 81 ~~~~iD~lv~~ag 93 (248)
+-.+.|++|.+.+
T Consensus 67 ~~~~~d~vi~~~~ 79 (141)
T 3llv_A 67 DLEGVSAVLITGS 79 (141)
T ss_dssp CCTTCSEEEECCS
T ss_pred CcccCCEEEEecC
Confidence 1114899998776
|
| >1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=98.12 E-value=1.2e-05 Score=66.29 Aligned_cols=73 Identities=19% Similarity=0.328 Sum_probs=54.1
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|+++|+|+ ||+|++++..|++.| ++|++++|+.++++++.+....... +++.+.++ + .+ +
T Consensus 120 k~vlViGa-Gg~g~a~a~~L~~~G----~~V~v~~R~~~~~~~la~~~~~~~~-----~~~~~~~~-~-------~~--~ 179 (271)
T 1nyt_A 120 LRILLIGA-GGASRGVLLPLLSLD----CAVTITNRTVSRAEELAKLFAHTGS-----IQALSMDE-L-------EG--H 179 (271)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTT----CEEEEECSSHHHHHHHHHHTGGGSS-----EEECCSGG-G-------TT--C
T ss_pred CEEEEECC-cHHHHHHHHHHHHcC----CEEEEEECCHHHHHHHHHHhhccCC-----eeEecHHH-h-------cc--C
Confidence 68999998 799999999999999 8999999999888877554432211 23444333 2 21 2
Q ss_pred CCCccEEEeccccCC
Q psy11190 82 DQGLNVLVNNAGIAA 96 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~ 96 (248)
.+|+||++++...
T Consensus 180 --~~DivVn~t~~~~ 192 (271)
T 1nyt_A 180 --EFDLIINATSSGI 192 (271)
T ss_dssp --CCSEEEECCSCGG
T ss_pred --CCCEEEECCCCCC
Confidence 4999999998654
|
| >2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* | Back alignment and structure |
|---|
Probab=98.09 E-value=7.2e-06 Score=70.27 Aligned_cols=77 Identities=17% Similarity=0.293 Sum_probs=54.9
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCc-eEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPA-HIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
++++|+||+||||..+++.+...| + +|++++++.++.+.+.+.. +. . ..+|.++.+. .+.+ .+..
T Consensus 162 ~~vlI~GasggiG~~~~~~a~~~G----a~~Vi~~~~~~~~~~~~~~~~--g~--~-~~~d~~~~~~-~~~~----~~~~ 227 (357)
T 2zb4_A 162 KTMVVSGAAGACGSVAGQIGHFLG----CSRVVGICGTHEKCILLTSEL--GF--D-AAINYKKDNV-AEQL----RESC 227 (357)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHTT----CSEEEEEESCHHHHHHHHHTS--CC--S-EEEETTTSCH-HHHH----HHHC
T ss_pred cEEEEECCCcHHHHHHHHHHHHCC----CCeEEEEeCCHHHHHHHHHHc--CC--c-eEEecCchHH-HHHH----HHhc
Confidence 689999999999999999999999 7 9999999987766554311 11 1 2357766443 3332 2222
Q ss_pred cCCCccEEEeccc
Q psy11190 81 KDQGLNVLVNNAG 93 (248)
Q Consensus 81 ~~~~iD~lv~~ag 93 (248)
+. ++|++|+|+|
T Consensus 228 ~~-~~d~vi~~~G 239 (357)
T 2zb4_A 228 PA-GVDVYFDNVG 239 (357)
T ss_dssp TT-CEEEEEESCC
T ss_pred CC-CCCEEEECCC
Confidence 22 5999999998
|
| >2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* | Back alignment and structure |
|---|
Probab=98.06 E-value=1.2e-05 Score=68.81 Aligned_cols=78 Identities=18% Similarity=0.195 Sum_probs=56.4
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
++++|+||+||||..+++.+...| ++|++++++.++++.+.++ +.. ..+|.++.+. .+.+ .+..+
T Consensus 164 ~~vlV~Ga~ggiG~~~~~~a~~~G----a~Vi~~~~~~~~~~~~~~~---g~~---~~~~~~~~~~-~~~~----~~~~~ 228 (354)
T 2j8z_A 164 DYVLIHAGLSGVGTAAIQLTRMAG----AIPLVTAGSQKKLQMAEKL---GAA---AGFNYKKEDF-SEAT----LKFTK 228 (354)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHH---TCS---EEEETTTSCH-HHHH----HHHTT
T ss_pred CEEEEECCccHHHHHHHHHHHHcC----CEEEEEeCCHHHHHHHHHc---CCc---EEEecCChHH-HHHH----HHHhc
Confidence 579999999999999999999999 8999999998776665333 111 2357766544 4443 33222
Q ss_pred CCCccEEEecccc
Q psy11190 82 DQGLNVLVNNAGI 94 (248)
Q Consensus 82 ~~~iD~lv~~ag~ 94 (248)
..++|++|+|+|.
T Consensus 229 ~~~~d~vi~~~G~ 241 (354)
T 2j8z_A 229 GAGVNLILDCIGG 241 (354)
T ss_dssp TSCEEEEEESSCG
T ss_pred CCCceEEEECCCc
Confidence 2259999999984
|
| >3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A* | Back alignment and structure |
|---|
Probab=98.03 E-value=2e-05 Score=66.41 Aligned_cols=79 Identities=16% Similarity=0.196 Sum_probs=54.2
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecC---chhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRN---KDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
|+++|+|+ ||+|++++..|++.|+ .+|++++|+ .++++++.+.......+.+...++.+.++ + .+
T Consensus 155 k~~lVlGa-GG~g~aia~~L~~~Ga---~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~----l----~~ 222 (315)
T 3tnl_A 155 KKMTICGA-GGAATAICIQAALDGV---KEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQ----L----RK 222 (315)
T ss_dssp SEEEEECC-SHHHHHHHHHHHHTTC---SEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHH----H----HH
T ss_pred CEEEEECC-ChHHHHHHHHHHHCCC---CEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHH----H----Hh
Confidence 68999997 7999999999999993 389999999 77777775443332223333445544333 2 22
Q ss_pred hhcCCCccEEEecccc
Q psy11190 79 VVKDQGLNVLVNNAGI 94 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~ 94 (248)
... ..|+|||+...
T Consensus 223 ~l~--~aDiIINaTp~ 236 (315)
T 3tnl_A 223 EIA--ESVIFTNATGV 236 (315)
T ss_dssp HHH--TCSEEEECSST
T ss_pred hhc--CCCEEEECccC
Confidence 222 38999999764
|
| >1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=98.01 E-value=1.5e-05 Score=68.22 Aligned_cols=78 Identities=18% Similarity=0.354 Sum_probs=55.4
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
++++|+|++||||..+++.+...| ++|+++++++++++.+.++ +.. ..+|.++.+. .+. +.+..+
T Consensus 172 ~~vlV~GasggiG~~~~~~a~~~G----a~Vi~~~~~~~~~~~~~~~---ga~---~~~d~~~~~~-~~~----~~~~~~ 236 (351)
T 1yb5_A 172 ESVLVHGASGGVGLAACQIARAYG----LKILGTAGTEEGQKIVLQN---GAH---EVFNHREVNY-IDK----IKKYVG 236 (351)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTT----CEEEEEESSHHHHHHHHHT---TCS---EEEETTSTTH-HHH----HHHHHC
T ss_pred CEEEEECCCChHHHHHHHHHHHCC----CEEEEEeCChhHHHHHHHc---CCC---EEEeCCCchH-HHH----HHHHcC
Confidence 589999999999999999999999 8999999998776644332 111 2356665443 333 333332
Q ss_pred CCCccEEEecccc
Q psy11190 82 DQGLNVLVNNAGI 94 (248)
Q Consensus 82 ~~~iD~lv~~ag~ 94 (248)
..++|++|+|+|.
T Consensus 237 ~~~~D~vi~~~G~ 249 (351)
T 1yb5_A 237 EKGIDIIIEMLAN 249 (351)
T ss_dssp TTCEEEEEESCHH
T ss_pred CCCcEEEEECCCh
Confidence 2259999999983
|
| >2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* | Back alignment and structure |
|---|
Probab=97.98 E-value=1.5e-05 Score=67.86 Aligned_cols=79 Identities=13% Similarity=0.172 Sum_probs=56.3
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
+++||+|++|+||..+++.+...| ++|++++++.++++.+.+.. +. . ...|.++.++ +...++++. +
T Consensus 157 ~~vlI~Ga~g~iG~~~~~~a~~~G----~~V~~~~~~~~~~~~~~~~~--g~--~-~~~d~~~~~~-~~~~~~~~~---~ 223 (345)
T 2j3h_A 157 ETVYVSAASGAVGQLVGQLAKMMG----CYVVGSAGSKEKVDLLKTKF--GF--D-DAFNYKEESD-LTAALKRCF---P 223 (345)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTT----CEEEEEESSHHHHHHHHHTS--CC--S-EEEETTSCSC-SHHHHHHHC---T
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHc--CC--c-eEEecCCHHH-HHHHHHHHh---C
Confidence 589999999999999999999999 89999999987766543211 11 1 2357766544 444444333 2
Q ss_pred CCCccEEEecccc
Q psy11190 82 DQGLNVLVNNAGI 94 (248)
Q Consensus 82 ~~~iD~lv~~ag~ 94 (248)
.++|++|+|+|.
T Consensus 224 -~~~d~vi~~~g~ 235 (345)
T 2j3h_A 224 -NGIDIYFENVGG 235 (345)
T ss_dssp -TCEEEEEESSCH
T ss_pred -CCCcEEEECCCH
Confidence 259999999973
|
| >2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* | Back alignment and structure |
|---|
Probab=97.96 E-value=1.2e-05 Score=59.09 Aligned_cols=75 Identities=17% Similarity=0.243 Sum_probs=53.7
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|+.++|+|+ |.+|+.+++.|.+.| +.|++++++.++.+.+. .....++..|.++.+. +..+ ..
T Consensus 6 ~~~v~I~G~-G~iG~~~a~~l~~~g----~~v~~~d~~~~~~~~~~-----~~~~~~~~~d~~~~~~-l~~~------~~ 68 (144)
T 2hmt_A 6 NKQFAVIGL-GRFGGSIVKELHRMG----HEVLAVDINEEKVNAYA-----SYATHAVIANATEENE-LLSL------GI 68 (144)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHHTT----CCCEEEESCHHHHHTTT-----TTCSEEEECCTTCHHH-HHTT------TG
T ss_pred CCcEEEECC-CHHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHH-----HhCCEEEEeCCCCHHH-HHhc------CC
Confidence 457999998 999999999999999 88999999876544321 1134567788876544 3221 12
Q ss_pred cCCCccEEEecccc
Q psy11190 81 KDQGLNVLVNNAGI 94 (248)
Q Consensus 81 ~~~~iD~lv~~ag~ 94 (248)
. +.|++|++++.
T Consensus 69 ~--~~d~vi~~~~~ 80 (144)
T 2hmt_A 69 R--NFEYVIVAIGA 80 (144)
T ss_dssp G--GCSEEEECCCS
T ss_pred C--CCCEEEECCCC
Confidence 2 38999999873
|
| >1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=97.94 E-value=1.1e-05 Score=67.20 Aligned_cols=76 Identities=20% Similarity=0.250 Sum_probs=52.9
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcC-CceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHS-NLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|+++|||++ |+|+++++.|+++| +|++++|+.++++++.+...... ....+.+|+++. .+.+
T Consensus 129 k~vlV~GaG-giG~aia~~L~~~G-----~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~-----------~~~~ 191 (287)
T 1nvt_A 129 KNIVIYGAG-GAARAVAFELAKDN-----NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGL-----------DVDL 191 (287)
T ss_dssp CEEEEECCS-HHHHHHHHHHTSSS-----EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECT-----------TCCC
T ss_pred CEEEEECch-HHHHHHHHHHHHCC-----CEEEEECCHHHHHHHHHHHhhhcccccceeEEEeeH-----------HHhh
Confidence 689999997 99999999999655 79999999888877744432211 011234566542 1223
Q ss_pred cCCCccEEEeccccCC
Q psy11190 81 KDQGLNVLVNNAGIAA 96 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~ 96 (248)
+ ++|+||||+|...
T Consensus 192 ~--~~DilVn~ag~~~ 205 (287)
T 1nvt_A 192 D--GVDIIINATPIGM 205 (287)
T ss_dssp T--TCCEEEECSCTTC
T ss_pred C--CCCEEEECCCCCC
Confidence 3 4999999998754
|
| >4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A* | Back alignment and structure |
|---|
Probab=97.91 E-value=2.6e-05 Score=66.15 Aligned_cols=78 Identities=15% Similarity=0.218 Sum_probs=55.1
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
+++||+|++|+||..+++.+...| ++|+++++++++.+.+.+.. + .. ...|..+.+. .+.+ .+..+
T Consensus 151 ~~vlI~Ga~g~iG~~~~~~a~~~G----a~Vi~~~~~~~~~~~~~~~~---g-~~-~~~~~~~~~~-~~~~----~~~~~ 216 (336)
T 4b7c_A 151 ETVVISGAAGAVGSVAGQIARLKG----CRVVGIAGGAEKCRFLVEEL---G-FD-GAIDYKNEDL-AAGL----KRECP 216 (336)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTT----CEEEEEESSHHHHHHHHHTT---C-CS-EEEETTTSCH-HHHH----HHHCT
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHc---C-CC-EEEECCCHHH-HHHH----HHhcC
Confidence 589999999999999999999999 89999999987766552221 1 11 2356666443 3333 22222
Q ss_pred CCCccEEEecccc
Q psy11190 82 DQGLNVLVNNAGI 94 (248)
Q Consensus 82 ~~~iD~lv~~ag~ 94 (248)
.++|++|+|+|.
T Consensus 217 -~~~d~vi~~~g~ 228 (336)
T 4b7c_A 217 -KGIDVFFDNVGG 228 (336)
T ss_dssp -TCEEEEEESSCH
T ss_pred -CCceEEEECCCc
Confidence 259999999984
|
| >1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* | Back alignment and structure |
|---|
Probab=97.87 E-value=4.1e-05 Score=65.27 Aligned_cols=78 Identities=13% Similarity=0.275 Sum_probs=54.9
Q ss_pred ceEEEecCCCchhHHHHHHHHhC-CCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGL-GNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~-g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
++++|+|++|+||..+++.+... | ++|+++++++++++.+.++ +.. ...|.++.+. .+.+ .+..
T Consensus 172 ~~vlV~Gagg~iG~~~~~~a~~~~G----a~Vi~~~~~~~~~~~~~~~---g~~---~~~~~~~~~~-~~~~----~~~~ 236 (347)
T 1jvb_A 172 KTLLVVGAGGGLGTMAVQIAKAVSG----ATIIGVDVREEAVEAAKRA---GAD---YVINASMQDP-LAEI----RRIT 236 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTC----CEEEEEESSHHHHHHHHHH---TCS---EEEETTTSCH-HHHH----HHHT
T ss_pred CEEEEECCCccHHHHHHHHHHHcCC----CeEEEEcCCHHHHHHHHHh---CCC---EEecCCCccH-HHHH----HHHh
Confidence 58999999999999999999988 9 8999999998776655433 111 2346666443 3332 2222
Q ss_pred cCCCccEEEecccc
Q psy11190 81 KDQGLNVLVNNAGI 94 (248)
Q Consensus 81 ~~~~iD~lv~~ag~ 94 (248)
+.+++|++|+++|.
T Consensus 237 ~~~~~d~vi~~~g~ 250 (347)
T 1jvb_A 237 ESKGVDAVIDLNNS 250 (347)
T ss_dssp TTSCEEEEEESCCC
T ss_pred cCCCceEEEECCCC
Confidence 10259999999984
|
| >4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A | Back alignment and structure |
|---|
Probab=97.87 E-value=2.8e-05 Score=68.64 Aligned_cols=81 Identities=21% Similarity=0.290 Sum_probs=56.9
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCC--------------ch
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDF--------------SK 67 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~--------------~~ 67 (248)
+++||+|++|+||..++..+...| ++|++++++.++++.+.++ +... + .|..+. ++
T Consensus 222 ~~VlV~GasG~iG~~a~qla~~~G----a~vi~~~~~~~~~~~~~~l---Ga~~-~--i~~~~~~~~~~~~~~~~~~~~~ 291 (447)
T 4a0s_A 222 DIVLIWGASGGLGSYAIQFVKNGG----GIPVAVVSSAQKEAAVRAL---GCDL-V--INRAELGITDDIADDPRRVVET 291 (447)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT----CEEEEEESSHHHHHHHHHT---TCCC-E--EEHHHHTCCTTGGGCHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHcC----CEEEEEeCCHHHHHHHHhc---CCCE-E--Eecccccccccccccccccchh
Confidence 579999999999999999999889 8999999988776655432 2121 1 222211 22
Q ss_pred hhhhHHHHhhhhhcCCCccEEEecccc
Q psy11190 68 QQDVLFKDISDVVKDQGLNVLVNNAGI 94 (248)
Q Consensus 68 ~v~~~~~~i~~~~~~~~iD~lv~~ag~ 94 (248)
++.+.+.+.+..+ .++|++|+++|.
T Consensus 292 -~~~~~~~v~~~~g-~g~Dvvid~~G~ 316 (447)
T 4a0s_A 292 -GRKLAKLVVEKAG-REPDIVFEHTGR 316 (447)
T ss_dssp -HHHHHHHHHHHHS-SCCSEEEECSCH
T ss_pred -hhHHHHHHHHHhC-CCceEEEECCCc
Confidence 3455666776664 269999999984
|
| >1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A* | Back alignment and structure |
|---|
Probab=97.86 E-value=5.5e-05 Score=63.74 Aligned_cols=161 Identities=10% Similarity=0.030 Sum_probs=87.2
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeec--CchhHHHH-HHHHhhcCCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCR--NKDKAVEL-LALAQQHSNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r--~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
++++||||+|.+|..++..|+.+|. ...+.++++ +.++++.. .++..... .....+++++..+ . +.+
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~~~--~~el~L~Di~~~~~~~~~~~~dl~~~~~-~~~~~~~i~~~~d---~----l~~ 70 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKEPF--MKDLVLIGREHSINKLEGLREDIYDALA-GTRSDANIYVESD---E----NLR 70 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTT--CCEEEEEECGGGHHHHHHHHHHHHHHHT-TSCCCCEEEEEET---T----CGG
T ss_pred CEEEEECCCChhHHHHHHHHHhCCC--CCEEEEEcCCCchhhhHHHHHHHHHhHH-hcCCCeEEEeCCc---c----hHH
Confidence 1489999999999999999998872 246888888 65444332 22221111 1101223322110 0 111
Q ss_pred hhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 79 VVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
.+. +.|++||.||.... . ..+. ...+..|+.....+++.+.++ .++.++++|++..
T Consensus 71 al~--gaD~Vi~~Ag~~~~---~-g~~r---~dl~~~N~~i~~~i~~~i~~~---------------~~~~vlv~SNPv~ 126 (313)
T 1hye_A 71 IID--ESDVVIITSGVPRK---E-GMSR---MDLAKTNAKIVGKYAKKIAEI---------------CDTKIFVITNPVD 126 (313)
T ss_dssp GGT--TCSEEEECCSCCCC---T-TCCH---HHHHHHHHHHHHHHHHHHHHH---------------CCCEEEECSSSHH
T ss_pred HhC--CCCEEEECCCCCCC---C-CCcH---HHHHHHHHHHHHHHHHHHHHh---------------CCeEEEEecCcHH
Confidence 222 49999999996532 1 1232 233556666666666555443 3456777777664
Q ss_pred cccc-----cCCCCCccchh-hHHHHHHHHHHHHhhcc--CCCeEE
Q psy11190 159 SIED-----NTQGGFHPYRC-SKAALNAATRSLSIDLK--GDKIIA 196 (248)
Q Consensus 159 ~~~~-----~~~~~~~~y~~-sK~a~~~~~~~la~e~~--~~~i~v 196 (248)
.... ...+....++. +..--..+...++..+. +..|+.
T Consensus 127 ~~t~~~~k~~~~p~~rviG~gt~LD~~r~~~~la~~lgv~~~~v~~ 172 (313)
T 1hye_A 127 VMTYKALVDSKFERNQVFGLGTHLDSLRFKVAIAKFFGVHIDEVRT 172 (313)
T ss_dssp HHHHHHHHHHCCCTTSEEECTTHHHHHHHHHHHHHHHTCCGGGEEC
T ss_pred HHHHHHHHhhCcChhcEEEeCccHHHHHHHHHHHHHhCcCHHHeEE
Confidence 3311 11244455666 55545556666666553 334444
|
| >3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A | Back alignment and structure |
|---|
Probab=97.85 E-value=9.6e-05 Score=61.33 Aligned_cols=77 Identities=18% Similarity=0.233 Sum_probs=53.3
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHh-hcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQ-QHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|+++|+|+ ||+|++++..|++.|+ .+|++++|+.++++++.+... ....+.+...+. ++ ... .+.
T Consensus 128 k~vlVlGa-GG~g~aia~~L~~~G~---~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~---~~-l~~---~l~--- 193 (283)
T 3jyo_A 128 DSVVQVGA-GGVGNAVAYALVTHGV---QKLQVADLDTSRAQALADVINNAVGREAVVGVDA---RG-IED---VIA--- 193 (283)
T ss_dssp SEEEEECC-SHHHHHHHHHHHHTTC---SEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECS---TT-HHH---HHH---
T ss_pred CEEEEECC-cHHHHHHHHHHHHCCC---CEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCH---HH-HHH---HHh---
Confidence 68999998 7999999999999993 389999999999888854433 223333333332 23 221 122
Q ss_pred cCCCccEEEeccccC
Q psy11190 81 KDQGLNVLVNNAGIA 95 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~ 95 (248)
..|+|||+....
T Consensus 194 ---~~DiVInaTp~G 205 (283)
T 3jyo_A 194 ---AADGVVNATPMG 205 (283)
T ss_dssp ---HSSEEEECSSTT
T ss_pred ---cCCEEEECCCCC
Confidence 289999998643
|
| >2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.83 E-value=7e-05 Score=63.70 Aligned_cols=77 Identities=19% Similarity=0.335 Sum_probs=54.8
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
+++||+|++|++|..+++.+...| ++|+++++++++++.+.++ +.. ..+|.++.+. .+. +.+..+
T Consensus 168 ~~vlV~Gasg~iG~~~~~~a~~~G----~~Vi~~~~~~~~~~~~~~~---ga~---~~~d~~~~~~-~~~----~~~~~~ 232 (343)
T 2eih_A 168 DDVLVMAAGSGVSVAAIQIAKLFG----ARVIATAGSEDKLRRAKAL---GAD---ETVNYTHPDW-PKE----VRRLTG 232 (343)
T ss_dssp CEEEECSTTSTTHHHHHHHHHHTT----CEEEEEESSHHHHHHHHHH---TCS---EEEETTSTTH-HHH----HHHHTT
T ss_pred CEEEEECCCchHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHhc---CCC---EEEcCCcccH-HHH----HHHHhC
Confidence 579999999999999999999999 8999999998877665433 111 1257665432 222 233222
Q ss_pred CCCccEEEeccc
Q psy11190 82 DQGLNVLVNNAG 93 (248)
Q Consensus 82 ~~~iD~lv~~ag 93 (248)
..++|++|+++|
T Consensus 233 ~~~~d~vi~~~g 244 (343)
T 2eih_A 233 GKGADKVVDHTG 244 (343)
T ss_dssp TTCEEEEEESSC
T ss_pred CCCceEEEECCC
Confidence 125999999998
|
| >1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A | Back alignment and structure |
|---|
Probab=97.80 E-value=0.00014 Score=61.59 Aligned_cols=122 Identities=13% Similarity=0.145 Sum_probs=69.5
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
++++||||+|.+|..++..|+++| ....|++++++.+ .....++........ +.. +.+..+ ..+.+.
T Consensus 9 mKI~ViGAaG~VG~~la~~L~~~g--~~~ev~l~Di~~~-~~~~~dL~~~~~~~~-v~~-~~~t~d--------~~~al~ 75 (326)
T 1smk_A 9 FKVAILGAAGGIGQPLAMLMKMNP--LVSVLHLYDVVNA-PGVTADISHMDTGAV-VRG-FLGQQQ--------LEAALT 75 (326)
T ss_dssp EEEEEETTTSTTHHHHHHHHHHCT--TEEEEEEEESSSH-HHHHHHHHTSCSSCE-EEE-EESHHH--------HHHHHT
T ss_pred CEEEEECCCChHHHHHHHHHHhCC--CCCEEEEEeCCCc-HhHHHHhhcccccce-EEE-EeCCCC--------HHHHcC
Confidence 369999999999999999999877 2357889988765 112223322111111 111 111111 222222
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
+.|++|++||..... ..+.. ..+..|+.....+.+.+.+. . +++.++++|.+.+.
T Consensus 76 --gaDvVi~~ag~~~~~----g~~r~---dl~~~N~~~~~~i~~~i~~~----~----------p~~~viv~SNPv~~ 130 (326)
T 1smk_A 76 --GMDLIIVPAGVPRKP----GMTRD---DLFKINAGIVKTLCEGIAKC----C----------PRAIVNLISNPVNS 130 (326)
T ss_dssp --TCSEEEECCCCCCCS----SCCCS---HHHHHHHHHHHHHHHHHHHH----C----------TTSEEEECCSSHHH
T ss_pred --CCCEEEEcCCcCCCC----CCCHH---HHHHHHHHHHHHHHHHHHhh----C----------CCeEEEEECCchHH
Confidence 499999999965321 11222 22445655555555554443 1 46778887777765
|
| >3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* | Back alignment and structure |
|---|
Probab=97.79 E-value=6.6e-05 Score=63.61 Aligned_cols=78 Identities=15% Similarity=0.225 Sum_probs=55.0
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
+++||+||+|+||..++..+...| ++|++++++.++++.+.++ +.. ...|..+.+. .+. +.+..+
T Consensus 150 ~~vlV~Ga~g~iG~~~~~~a~~~G----a~Vi~~~~~~~~~~~~~~~---ga~---~~~~~~~~~~-~~~----~~~~~~ 214 (334)
T 3qwb_A 150 DYVLLFAAAGGVGLILNQLLKMKG----AHTIAVASTDEKLKIAKEY---GAE---YLINASKEDI-LRQ----VLKFTN 214 (334)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHTT----CEEEEEESSHHHHHHHHHT---TCS---EEEETTTSCH-HHH----HHHHTT
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHc---CCc---EEEeCCCchH-HHH----HHHHhC
Confidence 579999999999999999999999 8999999988876644432 111 2345555443 333 333332
Q ss_pred CCCccEEEecccc
Q psy11190 82 DQGLNVLVNNAGI 94 (248)
Q Consensus 82 ~~~iD~lv~~ag~ 94 (248)
..++|++|+++|.
T Consensus 215 ~~g~D~vid~~g~ 227 (334)
T 3qwb_A 215 GKGVDASFDSVGK 227 (334)
T ss_dssp TSCEEEEEECCGG
T ss_pred CCCceEEEECCCh
Confidence 2359999999984
|
| >3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} | Back alignment and structure |
|---|
Probab=97.77 E-value=8e-05 Score=63.28 Aligned_cols=78 Identities=18% Similarity=0.335 Sum_probs=55.9
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
++++|+|++|++|..++..+...| ++|++++++.++.+.+.++. .. ...|..+.+. .+. +.+..+
T Consensus 146 ~~VlV~Ga~g~iG~~~~~~a~~~G----a~Vi~~~~~~~~~~~~~~lg---a~---~~~~~~~~~~-~~~----~~~~~~ 210 (340)
T 3gms_A 146 DVLLVNACGSAIGHLFAQLSQILN----FRLIAVTRNNKHTEELLRLG---AA---YVIDTSTAPL-YET----VMELTN 210 (340)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHHT----CEEEEEESSSTTHHHHHHHT---CS---EEEETTTSCH-HHH----HHHHTT
T ss_pred CEEEEeCCccHHHHHHHHHHHHcC----CEEEEEeCCHHHHHHHHhCC---Cc---EEEeCCcccH-HHH----HHHHhC
Confidence 589999999999999999998889 89999999998877665532 11 1245555443 333 333333
Q ss_pred CCCccEEEecccc
Q psy11190 82 DQGLNVLVNNAGI 94 (248)
Q Consensus 82 ~~~iD~lv~~ag~ 94 (248)
..++|++|+++|.
T Consensus 211 ~~g~Dvvid~~g~ 223 (340)
T 3gms_A 211 GIGADAAIDSIGG 223 (340)
T ss_dssp TSCEEEEEESSCH
T ss_pred CCCCcEEEECCCC
Confidence 2259999999985
|
| >4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=97.77 E-value=8.4e-05 Score=63.53 Aligned_cols=77 Identities=22% Similarity=0.381 Sum_probs=55.6
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
+++||+||+|+||..++..+...| ++|+++++++++.+.+.++. .. ...|..+.+. .+.+ .+..+
T Consensus 169 ~~VlV~Gg~g~iG~~~~~~a~~~G----a~Vi~~~~~~~~~~~~~~lG---a~---~~~~~~~~~~-~~~~----~~~~~ 233 (353)
T 4dup_A 169 ESVLIHGGTSGIGTTAIQLARAFG----AEVYATAGSTGKCEACERLG---AK---RGINYRSEDF-AAVI----KAETG 233 (353)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTT----CEEEEEESSHHHHHHHHHHT---CS---EEEETTTSCH-HHHH----HHHHS
T ss_pred CEEEEEcCCCHHHHHHHHHHHHcC----CEEEEEeCCHHHHHHHHhcC---CC---EEEeCCchHH-HHHH----HHHhC
Confidence 579999999999999999999999 89999999988876655432 11 2246655443 3333 22222
Q ss_pred CCCccEEEecccc
Q psy11190 82 DQGLNVLVNNAGI 94 (248)
Q Consensus 82 ~~~iD~lv~~ag~ 94 (248)
.++|++|+++|.
T Consensus 234 -~g~Dvvid~~g~ 245 (353)
T 4dup_A 234 -QGVDIILDMIGA 245 (353)
T ss_dssp -SCEEEEEESCCG
T ss_pred -CCceEEEECCCH
Confidence 259999999984
|
| >1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A | Back alignment and structure |
|---|
Probab=97.76 E-value=0.00017 Score=60.36 Aligned_cols=117 Identities=14% Similarity=0.061 Sum_probs=68.4
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeec--CchhHHHH-HHHHhh---cCCceeEEeeccCCchhhhhHHHHh
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCR--NKDKAVEL-LALAQQ---HSNLHVIELDVTDFSKQQDVLFKDI 76 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r--~~~~~~~~-~~~~~~---~~~~~~~~~D~~~~~~~v~~~~~~i 76 (248)
+++||||+|.+|..++..|+.+|. ...+++.++ +.++++.. .++... ...+.+.. + +.+.
T Consensus 2 KI~IiGAaG~vG~~l~~~L~~~~~--~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~~~a--------- 67 (303)
T 1o6z_A 2 KVSVVGAAGTVGAAAGYNIALRDI--ADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--GYED--------- 67 (303)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC--CSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--CGGG---------
T ss_pred EEEEECCCChHHHHHHHHHHhCCC--CCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--CHHH---------
Confidence 489999999999999999998872 246888998 66554432 222211 12222221 1 1111
Q ss_pred hhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecC
Q psy11190 77 SDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSI 156 (248)
Q Consensus 77 ~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~ 156 (248)
+. +.|++|+.||.... . ..+.++ .+..|+.....+.+ .+.+.. +++.++++|.+
T Consensus 68 ---~~--~aDvVi~~ag~~~~---~-g~~r~d---l~~~N~~i~~~i~~----~i~~~~----------p~~~viv~SNP 121 (303)
T 1o6z_A 68 ---TA--GSDVVVITAGIPRQ---P-GQTRID---LAGDNAPIMEDIQS----SLDEHN----------DDYISLTTSNP 121 (303)
T ss_dssp ---GT--TCSEEEECCCCCCC---T-TCCHHH---HHHHHHHHHHHHHH----HHHTTC----------SCCEEEECCSS
T ss_pred ---hC--CCCEEEEcCCCCCC---C-CCCHHH---HHHHHHHHHHHHHH----HHHHHC----------CCcEEEEeCCh
Confidence 12 39999999996532 1 123332 34455555544444 444432 56778887776
Q ss_pred CCc
Q psy11190 157 MGS 159 (248)
Q Consensus 157 ~~~ 159 (248)
...
T Consensus 122 v~~ 124 (303)
T 1o6z_A 122 VDL 124 (303)
T ss_dssp HHH
T ss_pred HHH
Confidence 644
|
| >3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* | Back alignment and structure |
|---|
Probab=97.76 E-value=7.2e-05 Score=63.16 Aligned_cols=78 Identities=19% Similarity=0.240 Sum_probs=55.7
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
+++||+||+|++|..++..+...| ++|+++++++++++.+.++. .. ...|.++.+. .+. +.+..+
T Consensus 142 ~~VlV~Ga~g~iG~~~~~~a~~~G----a~Vi~~~~~~~~~~~~~~~G---a~---~~~~~~~~~~-~~~----~~~~~~ 206 (325)
T 3jyn_A 142 EIILFHAAAGGVGSLACQWAKALG----AKLIGTVSSPEKAAHAKALG---AW---ETIDYSHEDV-AKR----VLELTD 206 (325)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHHT----CEEEEEESSHHHHHHHHHHT---CS---EEEETTTSCH-HHH----HHHHTT
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHcC---CC---EEEeCCCccH-HHH----HHHHhC
Confidence 579999999999999999999899 89999999988776554432 11 2346555443 333 333332
Q ss_pred CCCccEEEecccc
Q psy11190 82 DQGLNVLVNNAGI 94 (248)
Q Consensus 82 ~~~iD~lv~~ag~ 94 (248)
..++|++|+++|.
T Consensus 207 ~~g~Dvvid~~g~ 219 (325)
T 3jyn_A 207 GKKCPVVYDGVGQ 219 (325)
T ss_dssp TCCEEEEEESSCG
T ss_pred CCCceEEEECCCh
Confidence 2259999999984
|
| >1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A* | Back alignment and structure |
|---|
Probab=97.74 E-value=8e-05 Score=61.44 Aligned_cols=73 Identities=19% Similarity=0.247 Sum_probs=51.9
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|+++|+|+ ||+|++++..|++.| .+|++++|+.++++++.+.......+ ...|+ ++ +. + +
T Consensus 120 ~~vlvlGa-Gg~g~a~a~~L~~~G----~~v~v~~R~~~~a~~l~~~~~~~~~~--~~~~~---~~-~~-------~--~ 179 (272)
T 1p77_A 120 QHVLILGA-GGATKGVLLPLLQAQ----QNIVLANRTFSKTKELAERFQPYGNI--QAVSM---DS-IP-------L--Q 179 (272)
T ss_dssp CEEEEECC-SHHHHTTHHHHHHTT----CEEEEEESSHHHHHHHHHHHGGGSCE--EEEEG---GG-CC-------C--S
T ss_pred CEEEEECC-cHHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHHccccCCe--EEeeH---HH-hc-------c--C
Confidence 68999998 799999999999999 89999999999888875544322221 11222 22 11 1 2
Q ss_pred CCCccEEEeccccCC
Q psy11190 82 DQGLNVLVNNAGIAA 96 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~ 96 (248)
..|+||++++...
T Consensus 180 --~~DivIn~t~~~~ 192 (272)
T 1p77_A 180 --TYDLVINATSAGL 192 (272)
T ss_dssp --CCSEEEECCCC--
T ss_pred --CCCEEEECCCCCC
Confidence 4999999998654
|
| >4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=97.68 E-value=0.00015 Score=61.65 Aligned_cols=77 Identities=18% Similarity=0.387 Sum_probs=53.7
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
+++||+||+|+||..++..+...| ++|++++++.++.+.+.++. .. .+ .|.. ++ ... .+.+..+
T Consensus 161 ~~VlV~Gasg~iG~~~~~~a~~~G----a~Vi~~~~~~~~~~~~~~~g---a~-~v--~~~~--~~-~~~---~v~~~~~ 224 (342)
T 4eye_A 161 ETVLVLGAAGGIGTAAIQIAKGMG----AKVIAVVNRTAATEFVKSVG---AD-IV--LPLE--EG-WAK---AVREATG 224 (342)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTT----CEEEEEESSGGGHHHHHHHT---CS-EE--EESS--TT-HHH---HHHHHTT
T ss_pred CEEEEECCCCHHHHHHHHHHHHcC----CEEEEEeCCHHHHHHHHhcC---Cc-EE--ecCc--hh-HHH---HHHHHhC
Confidence 579999999999999999999999 89999999988876555432 11 12 3433 23 222 2333333
Q ss_pred CCCccEEEecccc
Q psy11190 82 DQGLNVLVNNAGI 94 (248)
Q Consensus 82 ~~~iD~lv~~ag~ 94 (248)
..++|++|+++|.
T Consensus 225 ~~g~Dvvid~~g~ 237 (342)
T 4eye_A 225 GAGVDMVVDPIGG 237 (342)
T ss_dssp TSCEEEEEESCC-
T ss_pred CCCceEEEECCch
Confidence 2259999999984
|
| >3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A* | Back alignment and structure |
|---|
Probab=97.62 E-value=0.0004 Score=58.37 Aligned_cols=80 Identities=18% Similarity=0.224 Sum_probs=53.1
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecC---chhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRN---KDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
|+++|+|+ ||+|++++..|++.|+ .+|+++.|+ .++++++.+.........+...+..+.+. +.+.+.
T Consensus 149 k~~lVlGA-GGaaraia~~L~~~G~---~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~----~~~~l~- 219 (312)
T 3t4e_A 149 KTMVLLGA-GGAATAIGAQAAIEGI---KEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHA----FTEALA- 219 (312)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTC---SEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHH----HHHHHH-
T ss_pred CEEEEECc-CHHHHHHHHHHHHcCC---CEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhh----hHhhcc-
Confidence 68999997 8999999999999994 489999999 77777775443332223333344433211 111122
Q ss_pred hhcCCCccEEEeccccC
Q psy11190 79 VVKDQGLNVLVNNAGIA 95 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~ 95 (248)
..|+|||+.+..
T Consensus 220 -----~~DiIINaTp~G 231 (312)
T 3t4e_A 220 -----SADILTNGTKVG 231 (312)
T ss_dssp -----HCSEEEECSSTT
T ss_pred -----CceEEEECCcCC
Confidence 289999987654
|
| >3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=97.60 E-value=0.00025 Score=60.43 Aligned_cols=78 Identities=13% Similarity=0.137 Sum_probs=54.3
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
++++|+||+|++|..++..+...| ++|++++++.++.+.+.++. .. ...|..+.+. .+.+ .+....
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~G----a~Vi~~~~~~~~~~~~~~~G---a~---~~~~~~~~~~-~~~v-~~~~~~-- 231 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEEG----FRPIVTVRRDEQIALLKDIG---AA---HVLNEKAPDF-EATL-REVMKA-- 231 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHHT----CEEEEEESCGGGHHHHHHHT---CS---EEEETTSTTH-HHHH-HHHHHH--
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHcC---CC---EEEECCcHHH-HHHH-HHHhcC--
Confidence 589999999999999999999889 89999999988877665432 11 1245544332 3332 222221
Q ss_pred CCCccEEEecccc
Q psy11190 82 DQGLNVLVNNAGI 94 (248)
Q Consensus 82 ~~~iD~lv~~ag~ 94 (248)
.++|++|.++|.
T Consensus 232 -~g~D~vid~~g~ 243 (349)
T 3pi7_A 232 -EQPRIFLDAVTG 243 (349)
T ss_dssp -HCCCEEEESSCH
T ss_pred -CCCcEEEECCCC
Confidence 149999999984
|
| >2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* | Back alignment and structure |
|---|
Probab=97.57 E-value=0.00025 Score=60.80 Aligned_cols=72 Identities=14% Similarity=0.280 Sum_probs=50.3
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCc---hhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNK---DKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
++++|+|+ |++|..+++.+...| ++|++++++. ++.+.+.++ ....+ | .+ +- .+.+.+ .
T Consensus 182 ~~VlV~Ga-G~vG~~~~q~a~~~G----a~Vi~~~~~~~~~~~~~~~~~~-----ga~~v--~-~~-~~-~~~~~~--~- 243 (366)
T 2cdc_A 182 RKVLVVGT-GPIGVLFTLLFRTYG----LEVWMANRREPTEVEQTVIEET-----KTNYY--N-SS-NG-YDKLKD--S- 243 (366)
T ss_dssp CEEEEESC-HHHHHHHHHHHHHHT----CEEEEEESSCCCHHHHHHHHHH-----TCEEE--E-CT-TC-SHHHHH--H-
T ss_pred CEEEEECC-CHHHHHHHHHHHhCC----CEEEEEeCCccchHHHHHHHHh-----CCcee--c-hH-HH-HHHHHH--h-
Confidence 58999999 999999999999889 8999999988 665443332 12223 5 54 22 333322 1
Q ss_pred hhcCCCccEEEecccc
Q psy11190 79 VVKDQGLNVLVNNAGI 94 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~ 94 (248)
+ .++|++|+++|.
T Consensus 244 --~-~~~d~vid~~g~ 256 (366)
T 2cdc_A 244 --V-GKFDVIIDATGA 256 (366)
T ss_dssp --H-CCEEEEEECCCC
T ss_pred --C-CCCCEEEECCCC
Confidence 2 259999999985
|
| >3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.54 E-value=0.0002 Score=61.58 Aligned_cols=71 Identities=13% Similarity=0.213 Sum_probs=53.2
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhcC
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVKD 82 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~~ 82 (248)
+++|.|| |++|+.+++.|++ . ..|.+.+++.++++.+ ...+..+.+|++|.++ +..+ +.
T Consensus 18 kilvlGa-G~vG~~~~~~L~~-~----~~v~~~~~~~~~~~~~------~~~~~~~~~d~~d~~~-l~~~---~~----- 76 (365)
T 3abi_A 18 KVLILGA-GNIGRAIAWDLKD-E----FDVYIGDVNNENLEKV------KEFATPLKVDASNFDK-LVEV---MK----- 76 (365)
T ss_dssp EEEEECC-SHHHHHHHHHHTT-T----SEEEEEESCHHHHHHH------TTTSEEEECCTTCHHH-HHHH---HT-----
T ss_pred EEEEECC-CHHHHHHHHHHhc-C----CCeEEEEcCHHHHHHH------hccCCcEEEecCCHHH-HHHH---Hh-----
Confidence 4778898 9999999999974 4 6899999998776654 3356678899988766 3333 22
Q ss_pred CCccEEEeccccC
Q psy11190 83 QGLNVLVNNAGIA 95 (248)
Q Consensus 83 ~~iD~lv~~ag~~ 95 (248)
+.|+||++++..
T Consensus 77 -~~DvVi~~~p~~ 88 (365)
T 3abi_A 77 -EFELVIGALPGF 88 (365)
T ss_dssp -TCSEEEECCCGG
T ss_pred -CCCEEEEecCCc
Confidence 389999998754
|
| >2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* | Back alignment and structure |
|---|
Probab=97.50 E-value=0.00026 Score=60.66 Aligned_cols=76 Identities=18% Similarity=0.349 Sum_probs=52.9
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
++++|+||+|++|..+++.+...| ++|+++++++++.+.+.++ +.. ...|..+.+ +... +.+..+
T Consensus 165 ~~VlV~Ga~G~iG~~~~q~a~~~G----a~Vi~~~~~~~~~~~~~~~---Ga~---~~~~~~~~~--~~~~---~~~~~~ 229 (362)
T 2c0c_A 165 KKVLVTAAAGGTGQFAMQLSKKAK----CHVIGTCSSDEKSAFLKSL---GCD---RPINYKTEP--VGTV---LKQEYP 229 (362)
T ss_dssp CEEEETTTTBTTHHHHHHHHHHTT----CEEEEEESSHHHHHHHHHT---TCS---EEEETTTSC--HHHH---HHHHCT
T ss_pred CEEEEeCCCcHHHHHHHHHHHhCC----CEEEEEECCHHHHHHHHHc---CCc---EEEecCChh--HHHH---HHHhcC
Confidence 579999999999999999999899 8999999998776655432 111 124554433 2222 222222
Q ss_pred CCCccEEEeccc
Q psy11190 82 DQGLNVLVNNAG 93 (248)
Q Consensus 82 ~~~iD~lv~~ag 93 (248)
.++|++|+++|
T Consensus 230 -~g~D~vid~~g 240 (362)
T 2c0c_A 230 -EGVDVVYESVG 240 (362)
T ss_dssp -TCEEEEEECSC
T ss_pred -CCCCEEEECCC
Confidence 25999999987
|
| >3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=97.49 E-value=0.00057 Score=56.31 Aligned_cols=45 Identities=20% Similarity=0.317 Sum_probs=38.7
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQ 50 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~ 50 (248)
|+++|+|+ ||+|++++..|++.|+ .+|++++|+.++++++.+...
T Consensus 121 k~~lvlGa-Gg~~~aia~~L~~~G~---~~v~i~~R~~~~a~~la~~~~ 165 (272)
T 3pwz_A 121 RRVLLLGA-GGAVRGALLPFLQAGP---SELVIANRDMAKALALRNELD 165 (272)
T ss_dssp SEEEEECC-SHHHHHHHHHHHHTCC---SEEEEECSCHHHHHHHHHHHC
T ss_pred CEEEEECc-cHHHHHHHHHHHHcCC---CEEEEEeCCHHHHHHHHHHhc
Confidence 68999997 6999999999999994 499999999998888865543
|
| >3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B* | Back alignment and structure |
|---|
Probab=97.49 E-value=0.00041 Score=57.44 Aligned_cols=72 Identities=24% Similarity=0.341 Sum_probs=51.7
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|+++|+|+ ||+|++++..|++.|+ .+|+++.|+.++++++.+.......+... +. ++ . . .
T Consensus 127 k~vlvlGa-Gg~g~aia~~L~~~G~---~~v~v~~R~~~~a~~la~~~~~~~~~~~~--~~---~~-l-------~---~ 186 (281)
T 3o8q_A 127 ATILLIGA-GGAARGVLKPLLDQQP---ASITVTNRTFAKAEQLAELVAAYGEVKAQ--AF---EQ-L-------K---Q 186 (281)
T ss_dssp CEEEEECC-SHHHHHHHHHHHTTCC---SEEEEEESSHHHHHHHHHHHGGGSCEEEE--EG---GG-C-------C---S
T ss_pred CEEEEECc-hHHHHHHHHHHHhcCC---CeEEEEECCHHHHHHHHHHhhccCCeeEe--eH---HH-h-------c---C
Confidence 68999998 7999999999999993 49999999999988886554432222222 22 22 1 1 1
Q ss_pred CCCccEEEeccccC
Q psy11190 82 DQGLNVLVNNAGIA 95 (248)
Q Consensus 82 ~~~iD~lv~~ag~~ 95 (248)
..|+||++.+..
T Consensus 187 --~aDiIInaTp~g 198 (281)
T 3o8q_A 187 --SYDVIINSTSAS 198 (281)
T ss_dssp --CEEEEEECSCCC
T ss_pred --CCCEEEEcCcCC
Confidence 489999998654
|
| >3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00031 Score=62.10 Aligned_cols=82 Identities=20% Similarity=0.288 Sum_probs=58.6
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeec-------------cCCchh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDV-------------TDFSKQ 68 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~-------------~~~~~~ 68 (248)
++++|+|++|++|...+..+...| ++|+++++++++++.+.++. .. .+ .|. ++.++
T Consensus 230 ~~VlV~GasG~vG~~avqlak~~G----a~vi~~~~~~~~~~~~~~lG---a~-~v--i~~~~~d~~~~~~~~~~~~~~- 298 (456)
T 3krt_A 230 DNVLIWGASGGLGSYATQFALAGG----ANPICVVSSPQKAEICRAMG---AE-AI--IDRNAEGYRFWKDENTQDPKE- 298 (456)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT----CEEEEEESSHHHHHHHHHHT---CC-EE--EETTTTTCCSEEETTEECHHH-
T ss_pred CEEEEECCCCHHHHHHHHHHHHcC----CeEEEEECCHHHHHHHHhhC---Cc-EE--EecCcCcccccccccccchHH-
Confidence 479999999999999999998889 89999998887776654432 11 11 222 23333
Q ss_pred hhhHHHHhhhhhcCCCccEEEecccc
Q psy11190 69 QDVLFKDISDVVKDQGLNVLVNNAGI 94 (248)
Q Consensus 69 v~~~~~~i~~~~~~~~iD~lv~~ag~ 94 (248)
++.+.+.+.+..+..++|++|.++|.
T Consensus 299 ~~~~~~~i~~~t~g~g~Dvvid~~G~ 324 (456)
T 3krt_A 299 WKRFGKRIRELTGGEDIDIVFEHPGR 324 (456)
T ss_dssp HHHHHHHHHHHHTSCCEEEEEECSCH
T ss_pred HHHHHHHHHHHhCCCCCcEEEEcCCc
Confidence 45666777776543369999999884
|
| >1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=97.45 E-value=0.00052 Score=49.87 Aligned_cols=73 Identities=22% Similarity=0.236 Sum_probs=51.3
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhcC
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVKD 82 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~~ 82 (248)
.++|+|+ |.+|..+++.|.+.| ..|++++++++..+.+.+. ..+.++..|.++.+. ... ....
T Consensus 6 ~i~IiG~-G~iG~~~a~~L~~~g----~~v~~~d~~~~~~~~~~~~----~~~~~~~~d~~~~~~-l~~------~~~~- 68 (140)
T 1lss_A 6 YIIIAGI-GRVGYTLAKSLSEKG----HDIVLIDIDKDICKKASAE----IDALVINGDCTKIKT-LED------AGIE- 68 (140)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHH----CSSEEEESCTTSHHH-HHH------TTTT-
T ss_pred EEEEECC-CHHHHHHHHHHHhCC----CeEEEEECCHHHHHHHHHh----cCcEEEEcCCCCHHH-HHH------cCcc-
Confidence 5788886 999999999999999 8999999987765544321 134566777766443 211 1122
Q ss_pred CCccEEEeccc
Q psy11190 83 QGLNVLVNNAG 93 (248)
Q Consensus 83 ~~iD~lv~~ag 93 (248)
+.|++|++.+
T Consensus 69 -~~d~vi~~~~ 78 (140)
T 1lss_A 69 -DADMYIAVTG 78 (140)
T ss_dssp -TCSEEEECCS
T ss_pred -cCCEEEEeeC
Confidence 4899999974
|
| >1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=97.39 E-value=0.00072 Score=50.40 Aligned_cols=76 Identities=17% Similarity=0.125 Sum_probs=54.6
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCc-hhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNK-DKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
+.++|.|+ |.+|+.+++.|.+.| ..|++++++. +..+.+.+.. ...+.++..|.++.+. ...+ ..
T Consensus 4 ~~vlI~G~-G~vG~~la~~L~~~g----~~V~vid~~~~~~~~~~~~~~--~~~~~~i~gd~~~~~~-l~~a------~i 69 (153)
T 1id1_A 4 DHFIVCGH-SILAINTILQLNQRG----QNVTVISNLPEDDIKQLEQRL--GDNADVIPGDSNDSSV-LKKA------GI 69 (153)
T ss_dssp SCEEEECC-SHHHHHHHHHHHHTT----CCEEEEECCCHHHHHHHHHHH--CTTCEEEESCTTSHHH-HHHH------TT
T ss_pred CcEEEECC-CHHHHHHHHHHHHCC----CCEEEEECCChHHHHHHHHhh--cCCCeEEEcCCCCHHH-HHHc------Ch
Confidence 36888886 999999999999999 8999999974 5444443332 2357888899987655 3221 11
Q ss_pred cCCCccEEEeccc
Q psy11190 81 KDQGLNVLVNNAG 93 (248)
Q Consensus 81 ~~~~iD~lv~~ag 93 (248)
. +.|.+|.+.+
T Consensus 70 ~--~ad~vi~~~~ 80 (153)
T 1id1_A 70 D--RCRAILALSD 80 (153)
T ss_dssp T--TCSEEEECSS
T ss_pred h--hCCEEEEecC
Confidence 2 4899988875
|
| >2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus} | Back alignment and structure |
|---|
Probab=97.36 E-value=0.00037 Score=58.16 Aligned_cols=75 Identities=17% Similarity=0.282 Sum_probs=51.4
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|+++|+|+ ||+|++++..|++.|+ .+|++++|+.++++++.+....... ++.+.++ +.+...
T Consensus 142 ~~vlVlGa-Gg~g~aia~~L~~~G~---~~V~v~nR~~~ka~~la~~~~~~~~------~~~~~~~--------~~~~~~ 203 (297)
T 2egg_A 142 KRILVIGA-GGGARGIYFSLLSTAA---ERIDMANRTVEKAERLVREGDERRS------AYFSLAE--------AETRLA 203 (297)
T ss_dssp CEEEEECC-SHHHHHHHHHHHTTTC---SEEEEECSSHHHHHHHHHHSCSSSC------CEECHHH--------HHHTGG
T ss_pred CEEEEECc-HHHHHHHHHHHHHCCC---CEEEEEeCCHHHHHHHHHHhhhccC------ceeeHHH--------HHhhhc
Confidence 67999997 7999999999999993 3999999999888777544321100 1111111 222233
Q ss_pred CCCccEEEeccccCC
Q psy11190 82 DQGLNVLVNNAGIAA 96 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~ 96 (248)
..|+||++++...
T Consensus 204 --~aDivIn~t~~~~ 216 (297)
T 2egg_A 204 --EYDIIINTTSVGM 216 (297)
T ss_dssp --GCSEEEECSCTTC
T ss_pred --cCCEEEECCCCCC
Confidence 3899999998653
|
| >2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00057 Score=58.15 Aligned_cols=77 Identities=23% Similarity=0.307 Sum_probs=51.8
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCc-eEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPA-HIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
++++|+|+ |++|..+++.+...| + +|+++++++++.+.+.++. . . ...|..+.+- . +.+.+..
T Consensus 169 ~~VlV~Ga-G~vG~~~~q~a~~~G----a~~Vi~~~~~~~~~~~~~~~G---a--~-~~~~~~~~~~-~----~~v~~~~ 232 (348)
T 2d8a_A 169 KSVLITGA-GPLGLLGIAVAKASG----AYPVIVSEPSDFRRELAKKVG---A--D-YVINPFEEDV-V----KEVMDIT 232 (348)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTT----CCSEEEECSCHHHHHHHHHHT---C--S-EEECTTTSCH-H----HHHHHHT
T ss_pred CEEEEECC-CHHHHHHHHHHHHcC----CCEEEEECCCHHHHHHHHHhC---C--C-EEECCCCcCH-H----HHHHHHc
Confidence 47999999 999999999998889 6 9999999987766554332 1 1 1235444322 2 2233332
Q ss_pred cCCCccEEEecccc
Q psy11190 81 KDQGLNVLVNNAGI 94 (248)
Q Consensus 81 ~~~~iD~lv~~ag~ 94 (248)
+..++|++|.++|.
T Consensus 233 ~g~g~D~vid~~g~ 246 (348)
T 2d8a_A 233 DGNGVDVFLEFSGA 246 (348)
T ss_dssp TTSCEEEEEECSCC
T ss_pred CCCCCCEEEECCCC
Confidence 21259999999984
|
| >3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=97.35 E-value=0.0012 Score=55.86 Aligned_cols=117 Identities=15% Similarity=0.136 Sum_probs=64.9
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH-HHHHhhcC---CceeEEeeccCCchhhhhHHHHhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL-LALAQQHS---NLHVIELDVTDFSKQQDVLFKDIS 77 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~-~~~~~~~~---~~~~~~~D~~~~~~~v~~~~~~i~ 77 (248)
+.+.|+|+ |.+|..++..|+..|. ...|++.+++.++++.. .++..... .+.+.. .+.
T Consensus 10 ~kV~ViGa-G~vG~~~a~~l~~~~~--~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~---~~~------------ 71 (326)
T 3vku_A 10 QKVILVGD-GAVGSSYAYAMVLQGI--AQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYS---AEY------------ 71 (326)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTC--CSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE---CCG------------
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC--CCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEE---CcH------------
Confidence 46888996 9999999999999882 23899999988776654 23322111 122111 111
Q ss_pred hhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCC
Q psy11190 78 DVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIM 157 (248)
Q Consensus 78 ~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~ 157 (248)
+.+. +.|++|..||..... .++. ...++.|.. +.+.+.+.+.+.. +++.++++|.+.
T Consensus 72 ~a~~--~aDiVvi~ag~~~kp----G~tR---~dL~~~N~~----I~~~i~~~i~~~~----------p~a~ilvvtNPv 128 (326)
T 3vku_A 72 SDAK--DADLVVITAGAPQKP----GETR---LDLVNKNLK----ILKSIVDPIVDSG----------FNGIFLVAANPV 128 (326)
T ss_dssp GGGT--TCSEEEECCCCC---------------------------CHHHHHHHHHTTT----------CCSEEEECSSSH
T ss_pred HHhc--CCCEEEECCCCCCCC----CchH---HHHHHHHHH----HHHHHHHHHHhcC----------CceEEEEccCch
Confidence 1122 389999999975321 1122 233444443 3444555555432 678899998876
Q ss_pred Cc
Q psy11190 158 GS 159 (248)
Q Consensus 158 ~~ 159 (248)
..
T Consensus 129 di 130 (326)
T 3vku_A 129 DI 130 (326)
T ss_dssp HH
T ss_pred HH
Confidence 43
|
| >3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A* | Back alignment and structure |
|---|
Probab=97.32 E-value=0.0014 Score=55.40 Aligned_cols=118 Identities=14% Similarity=0.139 Sum_probs=71.5
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH-HHHHhhc----CCceeEEeeccCCchhhhhHHHHh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL-LALAQQH----SNLHVIELDVTDFSKQQDVLFKDI 76 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~-~~~~~~~----~~~~~~~~D~~~~~~~v~~~~~~i 76 (248)
+.+.|+|+ |.+|..++..|+..|. ...|++.+++.++++.. .++.... ..+.+...| .+. +
T Consensus 6 ~kI~ViGa-G~vG~~~a~~l~~~~~--~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~---~~a--------~ 71 (326)
T 3pqe_A 6 NKVALIGA-GFVGSSYAFALINQGI--TDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT---YED--------C 71 (326)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTC--CSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC---GGG--------G
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC--CceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc---HHH--------h
Confidence 36888896 9999999999999882 13899999998876654 2333221 122222111 111 1
Q ss_pred hhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecC
Q psy11190 77 SDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSI 156 (248)
Q Consensus 77 ~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~ 156 (248)
. +.|++|..+|.... + ..+..++ +..| ..+.+.+.+.+.+.. +++.++++|.+
T Consensus 72 ----~--~aDvVvi~ag~p~k--p--G~~R~dL---~~~N----~~Iv~~i~~~I~~~~----------p~a~vlvvtNP 124 (326)
T 3pqe_A 72 ----K--DADIVCICAGANQK--P--GETRLEL---VEKN----LKIFKGIVSEVMASG----------FDGIFLVATNP 124 (326)
T ss_dssp ----T--TCSEEEECCSCCCC--T--TCCHHHH---HHHH----HHHHHHHHHHHHHTT----------CCSEEEECSSS
T ss_pred ----C--CCCEEEEecccCCC--C--CccHHHH---HHHH----HHHHHHHHHHHHHhc----------CCeEEEEcCCh
Confidence 1 38999999986432 1 2233332 2223 344556666665542 57889999987
Q ss_pred CCcc
Q psy11190 157 MGSI 160 (248)
Q Consensus 157 ~~~~ 160 (248)
....
T Consensus 125 vd~~ 128 (326)
T 3pqe_A 125 VDIL 128 (326)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6543
|
| >1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A | Back alignment and structure |
|---|
Probab=97.32 E-value=0.00065 Score=58.26 Aligned_cols=74 Identities=19% Similarity=0.240 Sum_probs=52.3
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
++++|+|+ |++|+.+++.+...| ++|++++|+.++++.+.+.... .+. ++..+.++ +. +.+ .
T Consensus 168 ~~VlViGa-GgvG~~aa~~a~~~G----a~V~v~dr~~~r~~~~~~~~~~--~~~---~~~~~~~~-~~---~~~----~ 229 (361)
T 1pjc_A 168 GKVVILGG-GVVGTEAAKMAVGLG----AQVQIFDINVERLSYLETLFGS--RVE---LLYSNSAE-IE---TAV----A 229 (361)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHHGG--GSE---EEECCHHH-HH---HHH----H
T ss_pred CEEEEECC-CHHHHHHHHHHHhCC----CEEEEEeCCHHHHHHHHHhhCc--eeE---eeeCCHHH-HH---HHH----c
Confidence 58999999 999999999999999 8999999999888777554422 121 22222222 21 122 2
Q ss_pred CCCccEEEeccccC
Q psy11190 82 DQGLNVLVNNAGIA 95 (248)
Q Consensus 82 ~~~iD~lv~~ag~~ 95 (248)
+.|++|++++..
T Consensus 230 --~~DvVI~~~~~~ 241 (361)
T 1pjc_A 230 --EADLLIGAVLVP 241 (361)
T ss_dssp --TCSEEEECCCCT
T ss_pred --CCCEEEECCCcC
Confidence 389999999863
|
| >3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=97.30 E-value=0.001 Score=56.48 Aligned_cols=74 Identities=22% Similarity=0.378 Sum_probs=50.1
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
+++||+||+|++|..++..+...| ++|+++ ++.++++.+.++. ... .| .+.+ .... +.+..+
T Consensus 152 ~~VlV~Ga~g~iG~~~~q~a~~~G----a~Vi~~-~~~~~~~~~~~lG-----a~~--i~-~~~~--~~~~---~~~~~~ 213 (343)
T 3gaz_A 152 QTVLIQGGGGGVGHVAIQIALARG----ARVFAT-ARGSDLEYVRDLG-----ATP--ID-ASRE--PEDY---AAEHTA 213 (343)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT----CEEEEE-ECHHHHHHHHHHT-----SEE--EE-TTSC--HHHH---HHHHHT
T ss_pred CEEEEecCCCHHHHHHHHHHHHCC----CEEEEE-eCHHHHHHHHHcC-----CCE--ec-cCCC--HHHH---HHHHhc
Confidence 579999999999999999999999 889998 7776655444331 122 45 3332 2222 223222
Q ss_pred CCCccEEEeccc
Q psy11190 82 DQGLNVLVNNAG 93 (248)
Q Consensus 82 ~~~iD~lv~~ag 93 (248)
..++|++|.++|
T Consensus 214 ~~g~D~vid~~g 225 (343)
T 3gaz_A 214 GQGFDLVYDTLG 225 (343)
T ss_dssp TSCEEEEEESSC
T ss_pred CCCceEEEECCC
Confidence 225999999988
|
| >1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A* | Back alignment and structure |
|---|
Probab=97.27 E-value=0.0014 Score=55.01 Aligned_cols=119 Identities=17% Similarity=0.200 Sum_probs=69.6
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH-HHHHhhcCCceeEEeeccC---CchhhhhHHHHhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL-LALAQQHSNLHVIELDVTD---FSKQQDVLFKDIS 77 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~D~~~---~~~~v~~~~~~i~ 77 (248)
+.+.|+||+|.+|..++..|+.+| ....|++.+++. .+.. .++...... .++.. ..+ ..
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~--~~~ev~L~Di~~--~~~~a~dL~~~~~~-----~~l~~~~~t~d--------~~ 63 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSP--LVSRLTLYDIAH--TPGVAADLSHIETR-----ATVKGYLGPEQ--------LP 63 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCT--TCSEEEEEESSS--HHHHHHHHTTSSSS-----CEEEEEESGGG--------HH
T ss_pred CEEEEECCCChHHHHHHHHHHhCC--CCcEEEEEeCCc--cHHHHHHHhccCcC-----ceEEEecCCCC--------HH
Confidence 147899999999999999999877 236899999987 2222 223211111 12211 011 12
Q ss_pred hhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCC
Q psy11190 78 DVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIM 157 (248)
Q Consensus 78 ~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~ 157 (248)
+.+. +.|++|+.+|..... ..+..+ .+. ....+++.+.+.+.+.. +++.++++|.+.
T Consensus 64 ~a~~--~aDvVvi~ag~~~~~----g~~r~d---l~~----~n~~i~~~i~~~i~~~~----------p~a~viv~sNPv 120 (314)
T 1mld_A 64 DCLK--GCDVVVIPAGVPRKP----GMTRDD---LFN----TNATIVATLTAACAQHC----------PDAMICIISNPV 120 (314)
T ss_dssp HHHT--TCSEEEECCSCCCCT----TCCGGG---GHH----HHHHHHHHHHHHHHHHC----------TTSEEEECSSCH
T ss_pred HHhC--CCCEEEECCCcCCCC----CCcHHH---HHH----HHHHHHHHHHHHHHhhC----------CCeEEEEECCCc
Confidence 2222 389999999975421 122222 223 33345555555555542 578999999887
Q ss_pred Ccc
Q psy11190 158 GSI 160 (248)
Q Consensus 158 ~~~ 160 (248)
...
T Consensus 121 ~~~ 123 (314)
T 1mld_A 121 NST 123 (314)
T ss_dssp HHH
T ss_pred chh
Confidence 654
|
| >5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A* | Back alignment and structure |
|---|
Probab=97.26 E-value=0.0012 Score=56.00 Aligned_cols=122 Identities=15% Similarity=0.116 Sum_probs=68.5
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCce-----EEEeecCch--hHHHH-HHHHhhcCCceeEEeeccCCchhhhhHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAH-----IFATCRNKD--KAVEL-LALAQQHSNLHVIELDVTDFSKQQDVLF 73 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~-----V~~~~r~~~--~~~~~-~~~~~~~~~~~~~~~D~~~~~~~v~~~~ 73 (248)
++++||||+|.+|..++..|+..+. ... +++++.+.. .++-. .++....... . .++.....
T Consensus 4 ~kV~V~GaaG~VG~~la~~L~~~~~--~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~-~--~~~~~~~~------ 72 (333)
T 5mdh_A 4 IRVLVTGAAGQIAYSLLYSIGNGSV--FGKDQPIILVLLDITPMMGVLDGVLMELQDCALPL-L--KDVIATDK------ 72 (333)
T ss_dssp EEEEESSTTSHHHHTTHHHHHTTTT--TCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTT-E--EEEEEESC------
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCC--ccccCCCEEEEEeCCCccccchhhHhhhHhhhhcc-c--CCEEEcCC------
Confidence 3689999999999999999998773 124 899998752 33332 2332211111 1 12221111
Q ss_pred HHhhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCc-eEEE
Q psy11190 74 KDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRA-AIVN 152 (248)
Q Consensus 74 ~~i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~-~iv~ 152 (248)
..+.+. +.|++|+.||.... . ..+. ...++.|+. +++.+.+.+.+.. +++ .+++
T Consensus 73 --~~~~~~--daDvVvitAg~prk---p-G~tR---~dll~~N~~----i~~~i~~~i~~~~----------~~~~~viv 127 (333)
T 5mdh_A 73 --EEIAFK--DLDVAILVGSMPRR---D-GMER---KDLLKANVK----IFKCQGAALDKYA----------KKSVKVIV 127 (333)
T ss_dssp --HHHHTT--TCSEEEECCSCCCC---T-TCCT---TTTHHHHHH----HHHHHHHHHHHHS----------CTTCEEEE
T ss_pred --cHHHhC--CCCEEEEeCCCCCC---C-CCCH---HHHHHHHHH----HHHHHHHHHHHhC----------CCCeEEEE
Confidence 111122 38999999986532 1 1232 233344444 4555555555542 456 5899
Q ss_pred eecCCCc
Q psy11190 153 VSSIMGS 159 (248)
Q Consensus 153 vss~~~~ 159 (248)
+|.+...
T Consensus 128 vsNPvd~ 134 (333)
T 5mdh_A 128 VGNPANT 134 (333)
T ss_dssp CSSSHHH
T ss_pred cCCchHH
Confidence 8887643
|
| >3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=97.25 E-value=0.0011 Score=48.59 Aligned_cols=73 Identities=10% Similarity=0.082 Sum_probs=54.8
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
+.++|.|+ |.+|..+++.|.+.| ..|++++++++..+.+.+ ..+.++..|.++.+. .+.+ ...
T Consensus 8 ~~viIiG~-G~~G~~la~~L~~~g----~~v~vid~~~~~~~~~~~-----~g~~~i~gd~~~~~~-l~~a------~i~ 70 (140)
T 3fwz_A 8 NHALLVGY-GRVGSLLGEKLLASD----IPLVVIETSRTRVDELRE-----RGVRAVLGNAANEEI-MQLA------HLE 70 (140)
T ss_dssp SCEEEECC-SHHHHHHHHHHHHTT----CCEEEEESCHHHHHHHHH-----TTCEEEESCTTSHHH-HHHT------TGG
T ss_pred CCEEEECc-CHHHHHHHHHHHHCC----CCEEEEECCHHHHHHHHH-----cCCCEEECCCCCHHH-HHhc------Ccc
Confidence 36888886 889999999999999 899999999887665532 256678899988665 3332 111
Q ss_pred CCCccEEEeccc
Q psy11190 82 DQGLNVLVNNAG 93 (248)
Q Consensus 82 ~~~iD~lv~~ag 93 (248)
+.|.+|.+.+
T Consensus 71 --~ad~vi~~~~ 80 (140)
T 3fwz_A 71 --CAKWLILTIP 80 (140)
T ss_dssp --GCSEEEECCS
T ss_pred --cCCEEEEECC
Confidence 3888888765
|
| >3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} | Back alignment and structure |
|---|
Probab=97.21 E-value=0.0012 Score=56.15 Aligned_cols=76 Identities=11% Similarity=0.117 Sum_probs=52.8
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
+++||+||+|++|..++..+...| ++|+.+++++++.+.+.++. .. . ..|..+ + .. +.+.+..+
T Consensus 152 ~~VlV~gg~G~vG~~a~qla~~~G----a~Vi~~~~~~~~~~~~~~lG---a~-~--vi~~~~--~-~~---~~~~~~~~ 215 (346)
T 3fbg_A 152 KTLLIINGAGGVGSIATQIAKAYG----LRVITTASRNETIEWTKKMG---AD-I--VLNHKE--S-LL---NQFKTQGI 215 (346)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT----CEEEEECCSHHHHHHHHHHT---CS-E--EECTTS--C-HH---HHHHHHTC
T ss_pred CEEEEEcCCCHHHHHHHHHHHHcC----CEEEEEeCCHHHHHHHHhcC---Cc-E--EEECCc--c-HH---HHHHHhCC
Confidence 479999999999999999999889 89999999988766655432 11 1 123332 2 22 23333322
Q ss_pred CCCccEEEecccc
Q psy11190 82 DQGLNVLVNNAGI 94 (248)
Q Consensus 82 ~~~iD~lv~~ag~ 94 (248)
.++|++|.++|.
T Consensus 216 -~g~Dvv~d~~g~ 227 (346)
T 3fbg_A 216 -ELVDYVFCTFNT 227 (346)
T ss_dssp -CCEEEEEESSCH
T ss_pred -CCccEEEECCCc
Confidence 259999999874
|
| >3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=97.16 E-value=0.0011 Score=52.44 Aligned_cols=74 Identities=14% Similarity=0.094 Sum_probs=53.8
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|| ++|.|+ |.+|..+++.|.++| ..|++++++++..+++.+. ....++..|.++.+. .+.+ ..
T Consensus 1 M~-iiIiG~-G~~G~~la~~L~~~g----~~v~vid~~~~~~~~l~~~----~~~~~i~gd~~~~~~-l~~a------~i 63 (218)
T 3l4b_C 1 MK-VIIIGG-ETTAYYLARSMLSRK----YGVVIINKDRELCEEFAKK----LKATIIHGDGSHKEI-LRDA------EV 63 (218)
T ss_dssp CC-EEEECC-HHHHHHHHHHHHHTT----CCEEEEESCHHHHHHHHHH----SSSEEEESCTTSHHH-HHHH------TC
T ss_pred CE-EEEECC-CHHHHHHHHHHHhCC----CeEEEEECCHHHHHHHHHH----cCCeEEEcCCCCHHH-HHhc------Cc
Confidence 54 788886 899999999999999 8999999998876655322 245678889888655 3321 01
Q ss_pred cCCCccEEEeccc
Q psy11190 81 KDQGLNVLVNNAG 93 (248)
Q Consensus 81 ~~~~iD~lv~~ag 93 (248)
. +.|++|.+.+
T Consensus 64 ~--~ad~vi~~~~ 74 (218)
T 3l4b_C 64 S--KNDVVVILTP 74 (218)
T ss_dssp C--TTCEEEECCS
T ss_pred c--cCCEEEEecC
Confidence 1 3788887654
|
| >3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=97.14 E-value=0.00063 Score=50.22 Aligned_cols=42 Identities=17% Similarity=0.112 Sum_probs=36.0
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLAL 48 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~ 48 (248)
++++|.|+ |++|+.+++.|.+.| ..|++++|+.++.+++.+.
T Consensus 22 ~~v~iiG~-G~iG~~~a~~l~~~g----~~v~v~~r~~~~~~~~a~~ 63 (144)
T 3oj0_A 22 NKILLVGN-GMLASEIAPYFSYPQ----YKVTVAGRNIDHVRAFAEK 63 (144)
T ss_dssp CEEEEECC-SHHHHHHGGGCCTTT----CEEEEEESCHHHHHHHHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHhCC----CEEEEEcCCHHHHHHHHHH
Confidence 57899996 999999999999988 6799999999887776444
|
| >1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A | Back alignment and structure |
|---|
Probab=97.13 E-value=0.0014 Score=55.59 Aligned_cols=75 Identities=17% Similarity=0.197 Sum_probs=52.3
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
++++|+|+ |++|..++..+...| ++|+.+++++++.+.+.++ +.. ..+|.++.+. .+. +.+..+
T Consensus 166 ~~VlV~Ga-G~vG~~~~~~a~~~G----a~Vi~~~~~~~~~~~~~~l---Ga~---~~~d~~~~~~-~~~----~~~~~~ 229 (339)
T 1rjw_A 166 EWVAIYGI-GGLGHVAVQYAKAMG----LNVVAVDIGDEKLELAKEL---GAD---LVVNPLKEDA-AKF----MKEKVG 229 (339)
T ss_dssp CEEEEECC-STTHHHHHHHHHHTT----CEEEEECSCHHHHHHHHHT---TCS---EEECTTTSCH-HHH----HHHHHS
T ss_pred CEEEEECC-CHHHHHHHHHHHHcC----CEEEEEeCCHHHHHHHHHC---CCC---EEecCCCccH-HHH----HHHHhC
Confidence 57999999 889999999999889 8999999998876655432 111 2256665432 222 222222
Q ss_pred CCCccEEEecccc
Q psy11190 82 DQGLNVLVNNAGI 94 (248)
Q Consensus 82 ~~~iD~lv~~ag~ 94 (248)
++|++|+++|.
T Consensus 230 --~~d~vid~~g~ 240 (339)
T 1rjw_A 230 --GVHAAVVTAVS 240 (339)
T ss_dssp --SEEEEEESSCC
T ss_pred --CCCEEEECCCC
Confidence 59999999984
|
| >1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D | Back alignment and structure |
|---|
Probab=97.12 E-value=0.00082 Score=55.95 Aligned_cols=42 Identities=21% Similarity=0.391 Sum_probs=36.7
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA 47 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~ 47 (248)
++++|+|++|++|..++..+...| ++|+.+++++++.+.+.+
T Consensus 127 ~~vlV~Ga~G~vG~~~~~~a~~~G----a~Vi~~~~~~~~~~~~~~ 168 (302)
T 1iz0_A 127 EKVLVQAAAGALGTAAVQVARAMG----LRVLAAASRPEKLALPLA 168 (302)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHTT----CEEEEEESSGGGSHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHh
Confidence 579999999999999999998889 899999999888765543
|
| >1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* | Back alignment and structure |
|---|
Probab=97.12 E-value=0.0011 Score=56.83 Aligned_cols=73 Identities=21% Similarity=0.216 Sum_probs=50.2
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
++++|+|+ |++|..++..+...| ++|++++++.++.+.+.+.. +.. ...|..+.+. + .+..+
T Consensus 189 ~~VlV~Ga-G~vG~~~~q~a~~~G----a~Vi~~~~~~~~~~~~~~~l--Ga~---~v~~~~~~~~-~-------~~~~~ 250 (366)
T 1yqd_A 189 KHIGIVGL-GGLGHVAVKFAKAFG----SKVTVISTSPSKKEEALKNF--GAD---SFLVSRDQEQ-M-------QAAAG 250 (366)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTT----CEEEEEESCGGGHHHHHHTS--CCS---EEEETTCHHH-H-------HHTTT
T ss_pred CEEEEECC-CHHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHhc--CCc---eEEeccCHHH-H-------HHhhC
Confidence 47999996 999999999998889 89999999988766543221 111 1245554322 2 22222
Q ss_pred CCCccEEEecccc
Q psy11190 82 DQGLNVLVNNAGI 94 (248)
Q Consensus 82 ~~~iD~lv~~ag~ 94 (248)
++|++|.++|.
T Consensus 251 --~~D~vid~~g~ 261 (366)
T 1yqd_A 251 --TLDGIIDTVSA 261 (366)
T ss_dssp --CEEEEEECCSS
T ss_pred --CCCEEEECCCc
Confidence 59999999985
|
| >1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A* | Back alignment and structure |
|---|
Probab=97.12 E-value=0.007 Score=50.30 Aligned_cols=118 Identities=19% Similarity=0.158 Sum_probs=71.6
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH-HHHHhhc---C-CceeEEeeccCCchhhhhHHHH
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL-LALAQQH---S-NLHVIELDVTDFSKQQDVLFKD 75 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~-~~~~~~~---~-~~~~~~~D~~~~~~~v~~~~~~ 75 (248)
|| +.|+|+ |.+|.+++..|+.+|. ...|++.+++++.++.. .++.... + ...+... +|.+.
T Consensus 1 Mk-I~ViGa-G~vG~~la~~l~~~~~--~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~~a-------- 66 (294)
T 1oju_A 1 MK-LGFVGA-GRVGSTSAFTCLLNLD--VDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYSL-------- 66 (294)
T ss_dssp CE-EEEECC-SHHHHHHHHHHHHHSC--CSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SCGGG--------
T ss_pred CE-EEEECC-CHHHHHHHHHHHhCCC--CCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe--CCHHH--------
Confidence 65 677788 9999999999999882 12899999998876532 2222111 1 1111111 12111
Q ss_pred hhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeec
Q psy11190 76 ISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSS 155 (248)
Q Consensus 76 i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss 155 (248)
+. +.|++|..+|..... ..+..++ +. ....+.+.+.+.+.+.. +++.++++|.
T Consensus 67 ~~------~aDiVViaag~~~kp----G~~R~dl---~~----~N~~i~~~i~~~i~~~~----------p~a~iivvsN 119 (294)
T 1oju_A 67 LK------GSEIIVVTAGLARKP----GMTRLDL---AH----KNAGIIKDIAKKIVENA----------PESKILVVTN 119 (294)
T ss_dssp GT------TCSEEEECCCCCCCS----SCCHHHH---HH----HHHHHHHHHHHHHHTTS----------TTCEEEECSS
T ss_pred hC------CCCEEEECCCCCCCC----CCcHHHH---HH----HHHHHHHHHHHHHHhhC----------CCeEEEEeCC
Confidence 11 389999999975321 1233333 22 33455666666666643 6789999998
Q ss_pred CCCc
Q psy11190 156 IMGS 159 (248)
Q Consensus 156 ~~~~ 159 (248)
+...
T Consensus 120 Pvd~ 123 (294)
T 1oju_A 120 PMDV 123 (294)
T ss_dssp SHHH
T ss_pred cchH
Confidence 7644
|
| >4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ... | Back alignment and structure |
|---|
Probab=97.05 E-value=0.004 Score=52.69 Aligned_cols=118 Identities=14% Similarity=0.144 Sum_probs=71.5
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH-HHHHhhc--C-CceeEEeeccCCchhhhhHHHHhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL-LALAQQH--S-NLHVIELDVTDFSKQQDVLFKDIS 77 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~-~~~~~~~--~-~~~~~~~D~~~~~~~v~~~~~~i~ 77 (248)
+.+.|+|+ |.+|..++..|+.+|. ...|++.+.+.++++.. .++.... . ....+.. .|.+. +.
T Consensus 20 ~kV~ViGa-G~vG~~~a~~l~~~~~--~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~--~d~~~--------~~ 86 (331)
T 4aj2_A 20 NKITVVGV-GAVGMACAISILMKDL--ADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSS--KDYSV--------TA 86 (331)
T ss_dssp SEEEEECC-SHHHHHHHHHHHHTTC--CSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEEC--SSGGG--------GT
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC--CceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEc--CCHHH--------hC
Confidence 46888897 9999999999999982 24899999998776654 3333211 1 1111111 11111 11
Q ss_pred hhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCC
Q psy11190 78 DVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIM 157 (248)
Q Consensus 78 ~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~ 157 (248)
+.|++|..||.... ..++..+ .++.| .-+.+.+.+.+.+.. +++.++++|.+.
T Consensus 87 ------~aDiVvi~aG~~~k----pG~tR~d---L~~~N----~~I~~~i~~~i~~~~----------p~a~vlvvtNPv 139 (331)
T 4aj2_A 87 ------NSKLVIITAGARQQ----EGESRLN---LVQRN----VNIFKFIIPNVVKYS----------PQCKLLIVSNPV 139 (331)
T ss_dssp ------TEEEEEECCSCCCC----TTCCGGG---GHHHH----HHHHHHHHHHHHHHC----------TTCEEEECSSSH
T ss_pred ------CCCEEEEccCCCCC----CCccHHH---HHHHH----HHHHHHHHHHHHHHC----------CCeEEEEecChH
Confidence 38999999997532 1233333 33333 345555555555542 688999999876
Q ss_pred Cc
Q psy11190 158 GS 159 (248)
Q Consensus 158 ~~ 159 (248)
..
T Consensus 140 di 141 (331)
T 4aj2_A 140 DI 141 (331)
T ss_dssp HH
T ss_pred HH
Confidence 54
|
| >2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A* | Back alignment and structure |
|---|
Probab=97.02 E-value=0.013 Score=48.60 Aligned_cols=119 Identities=19% Similarity=0.152 Sum_probs=72.0
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH-HHHHhh---c-CCceeEEeeccCCchhhhhHHHH
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL-LALAQQ---H-SNLHVIELDVTDFSKQQDVLFKD 75 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~-~~~~~~---~-~~~~~~~~D~~~~~~~v~~~~~~ 75 (248)
||+ .|+| +|++|..+|..|+.++ ....+++.+.+.+.++-. .++... . ....... -.|.+.
T Consensus 1 MKV-~IiG-aG~VG~~~a~~l~~~~--~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~--~~d~~~-------- 66 (294)
T 2x0j_A 1 MKL-GFVG-AGRVGSTSAFTCLLNL--DVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVG--GADYSL-------- 66 (294)
T ss_dssp CEE-EEEC-CSHHHHHHHHHHHHHS--CCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEE--ESCGGG--------
T ss_pred CEE-EEEC-cCHHHHHHHHHHHhCC--CCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEec--CCCHHH--------
Confidence 774 4557 5999999999999888 336899999987654433 233221 1 1222221 112222
Q ss_pred hhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeec
Q psy11190 76 ISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSS 155 (248)
Q Consensus 76 i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss 155 (248)
+. +-|++|..||....+ .++.+++ ++.| ..+.+.+.+.+.+.. +++.++.+|.
T Consensus 67 ~~------~aDvVvitAG~prkp----GmtR~dL---l~~N----a~I~~~i~~~i~~~~----------p~aivlvvsN 119 (294)
T 2x0j_A 67 LK------GSEIIVVTAGLARKP----GMTRLDL---AHKN----AGIIKDIAKKIVENA----------PESKILVVTN 119 (294)
T ss_dssp GT------TCSEEEECCCCCCCS----SSCHHHH---HHHH----HHHHHHHHHHHHTTS----------TTCEEEECSS
T ss_pred hC------CCCEEEEecCCCCCC----CCchHHH---HHHH----HHHHHHHHHHHHhcC----------CceEEEEecC
Confidence 11 389999999976431 2355444 3333 446666666666643 6788999988
Q ss_pred CCCcc
Q psy11190 156 IMGSI 160 (248)
Q Consensus 156 ~~~~~ 160 (248)
+....
T Consensus 120 Pvd~~ 124 (294)
T 2x0j_A 120 PMDVM 124 (294)
T ss_dssp SHHHH
T ss_pred cchhh
Confidence 76443
|
| >2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* | Back alignment and structure |
|---|
Probab=97.01 E-value=0.0015 Score=48.75 Aligned_cols=74 Identities=16% Similarity=0.184 Sum_probs=51.1
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
++++|.|+ |.+|..+++.|.+.| ..|++++|++++.+.+.+ .....++..|.++.+. ... . ...
T Consensus 20 ~~v~IiG~-G~iG~~la~~L~~~g----~~V~vid~~~~~~~~~~~----~~g~~~~~~d~~~~~~-l~~----~--~~~ 83 (155)
T 2g1u_A 20 KYIVIFGC-GRLGSLIANLASSSG----HSVVVVDKNEYAFHRLNS----EFSGFTVVGDAAEFET-LKE----C--GME 83 (155)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTT----CEEEEEESCGGGGGGSCT----TCCSEEEESCTTSHHH-HHT----T--TGG
T ss_pred CcEEEECC-CHHHHHHHHHHHhCC----CeEEEEECCHHHHHHHHh----cCCCcEEEecCCCHHH-HHH----c--Ccc
Confidence 46888885 999999999999999 899999999877554310 1234456667665433 221 1 112
Q ss_pred CCCccEEEeccc
Q psy11190 82 DQGLNVLVNNAG 93 (248)
Q Consensus 82 ~~~iD~lv~~ag 93 (248)
+.|++|.+.+
T Consensus 84 --~ad~Vi~~~~ 93 (155)
T 2g1u_A 84 --KADMVFAFTN 93 (155)
T ss_dssp --GCSEEEECSS
T ss_pred --cCCEEEEEeC
Confidence 3899999876
|
| >3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} | Back alignment and structure |
|---|
Probab=96.98 E-value=0.0027 Score=54.26 Aligned_cols=76 Identities=17% Similarity=0.309 Sum_probs=52.3
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
+++||+| +|++|..++..+...| ++|+++++++++.+.+.++. .. ...| .+.++ +. +.+.+..+
T Consensus 191 ~~VlV~G-~G~vG~~a~qla~~~G----a~Vi~~~~~~~~~~~~~~lG---a~---~vi~-~~~~~-~~---~~v~~~~~ 254 (363)
T 3uog_A 191 DRVVVQG-TGGVALFGLQIAKATG----AEVIVTSSSREKLDRAFALG---AD---HGIN-RLEED-WV---ERVYALTG 254 (363)
T ss_dssp CEEEEES-SBHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHT---CS---EEEE-TTTSC-HH---HHHHHHHT
T ss_pred CEEEEEC-CCHHHHHHHHHHHHcC----CEEEEEecCchhHHHHHHcC---CC---EEEc-CCccc-HH---HHHHHHhC
Confidence 4799999 8999999999888888 89999999988766654432 11 1235 33333 22 23333333
Q ss_pred CCCccEEEeccc
Q psy11190 82 DQGLNVLVNNAG 93 (248)
Q Consensus 82 ~~~iD~lv~~ag 93 (248)
..++|++|.++|
T Consensus 255 g~g~D~vid~~g 266 (363)
T 3uog_A 255 DRGADHILEIAG 266 (363)
T ss_dssp TCCEEEEEEETT
T ss_pred CCCceEEEECCC
Confidence 235999999998
|
| >3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A* | Back alignment and structure |
|---|
Probab=96.94 E-value=0.0041 Score=52.47 Aligned_cols=117 Identities=14% Similarity=0.192 Sum_probs=70.5
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCc-eEEEeecCchhHHHH-HHHHhhc----CCceeEEeeccCCchhhhhHHHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPA-HIFATCRNKDKAVEL-LALAQQH----SNLHVIELDVTDFSKQQDVLFKD 75 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~-~V~~~~r~~~~~~~~-~~~~~~~----~~~~~~~~D~~~~~~~v~~~~~~ 75 (248)
+.+.|+|+ |.+|.+++..|+..| . .|++.++++++++.. .++.... ....+... +|.+.
T Consensus 8 ~kI~viGa-G~vG~~~a~~l~~~~----~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t--~d~~a-------- 72 (324)
T 3gvi_A 8 NKIALIGS-GMIGGTLAHLAGLKE----LGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGA--NDYAA-------- 72 (324)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTT----CCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEE--SSGGG--------
T ss_pred CEEEEECC-CHHHHHHHHHHHhCC----CCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEe--CCHHH--------
Confidence 46888898 999999999999999 5 999999998876533 2222111 11222111 12111
Q ss_pred hhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeec
Q psy11190 76 ISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSS 155 (248)
Q Consensus 76 i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss 155 (248)
+. +.|++|..+|...... .+..++ +. ....+.+.+.+.+.+.. +++.++++|.
T Consensus 73 ~~------~aDiVIiaag~p~k~G----~~R~dl---~~----~N~~i~~~i~~~i~~~~----------p~a~iivvtN 125 (324)
T 3gvi_A 73 IE------GADVVIVTAGVPRKPG----MSRDDL---LG----INLKVMEQVGAGIKKYA----------PEAFVICITN 125 (324)
T ss_dssp GT------TCSEEEECCSCCCC---------CHH---HH----HHHHHHHHHHHHHHHHC----------TTCEEEECCS
T ss_pred HC------CCCEEEEccCcCCCCC----CCHHHH---HH----hhHHHHHHHHHHHHHHC----------CCeEEEecCC
Confidence 11 3899999998753311 122222 22 24455666666666643 5788999998
Q ss_pred CCCcc
Q psy11190 156 IMGSI 160 (248)
Q Consensus 156 ~~~~~ 160 (248)
+....
T Consensus 126 Pvd~~ 130 (324)
T 3gvi_A 126 PLDAM 130 (324)
T ss_dssp SHHHH
T ss_pred CcHHH
Confidence 76543
|
| >3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A* | Back alignment and structure |
|---|
Probab=96.94 E-value=0.0028 Score=51.97 Aligned_cols=40 Identities=18% Similarity=0.130 Sum_probs=36.8
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELL 46 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~ 46 (248)
|+++|.|+ ||.|++++..|++.| .+|+++.|+.++++++.
T Consensus 119 k~vlvlGa-GGaaraia~~L~~~G----~~v~V~nRt~~ka~~la 158 (269)
T 3phh_A 119 QNALILGA-GGSAKALACELKKQG----LQVSVLNRSSRGLDFFQ 158 (269)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTT----CEEEEECSSCTTHHHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHH
Confidence 67999986 999999999999999 89999999999988776
|
| >1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1 | Back alignment and structure |
|---|
Probab=96.93 E-value=0.0016 Score=54.56 Aligned_cols=33 Identities=18% Similarity=0.328 Sum_probs=28.5
Q ss_pred eEEEecCCC-----------------c-hhHHHHHHHHhCCCCCCceEEEeecCc
Q psy11190 3 SILITGCNR-----------------G-LGLGMIKVLVGLGNNQPAHIFATCRNK 39 (248)
Q Consensus 3 ~~lVtGas~-----------------g-iG~~ia~~l~~~g~~~~~~V~~~~r~~ 39 (248)
.+|||+|.. | .|.++|+.++++| +.|+++.+..
T Consensus 39 ~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~G----a~V~lv~g~~ 89 (313)
T 1p9o_A 39 VVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAG----YGVLFLYRAR 89 (313)
T ss_dssp EEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTT----CEEEEEEETT
T ss_pred EEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCC----CEEEEEecCC
Confidence 488887776 6 9999999999999 8999998854
|
| >3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=96.90 E-value=0.0025 Score=54.23 Aligned_cols=120 Identities=11% Similarity=0.072 Sum_probs=68.8
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH-HHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL-LALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
+.+.|+|++|.+|..++..++.+|. ...|++++.+.++++.. .++... . +-..++.-..+ ..+.+
T Consensus 9 ~KV~ViGaaG~VG~~~a~~l~~~g~--~~evvLiDi~~~k~~g~a~DL~~~-~---~~~~~i~~t~d--------~~~al 74 (343)
T 3fi9_A 9 EKLTIVGAAGMIGSNMAQTAAMMRL--TPNLCLYDPFAVGLEGVAEEIRHC-G---FEGLNLTFTSD--------IKEAL 74 (343)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTC--CSCEEEECSCHHHHHHHHHHHHHH-C---CTTCCCEEESC--------HHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHhcCC--CCEEEEEeCCchhHHHHHHhhhhC-c---CCCCceEEcCC--------HHHHh
Confidence 4688999999999999999999983 24899999988766543 233321 1 00011110011 11112
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCce-EEEeecCCC
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAA-IVNVSSIMG 158 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~-iv~vss~~~ 158 (248)
. +.|++|.+||.... . ..+..+ .+. ....+.+.+.+.+.+.. +++. ++++|.+..
T Consensus 75 ~--dADvVvitaG~p~k---p-G~~R~d---Ll~----~N~~I~~~i~~~i~~~~----------p~a~~vlvvsNPvd 130 (343)
T 3fi9_A 75 T--DAKYIVSSGGAPRK---E-GMTRED---LLK----GNAEIAAQLGKDIKSYC----------PDCKHVIIIFNPAD 130 (343)
T ss_dssp T--TEEEEEECCC-----------CHHH---HHH----HHHHHHHHHHHHHHHHC----------TTCCEEEECSSSHH
T ss_pred C--CCCEEEEccCCCCC---C-CCCHHH---HHH----HHHHHHHHHHHHHHHhc----------cCcEEEEEecCchH
Confidence 2 38999999996432 1 123333 222 33345666666666543 5674 788887664
|
| >2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A* | Back alignment and structure |
|---|
Probab=96.87 E-value=0.0029 Score=54.58 Aligned_cols=74 Identities=16% Similarity=0.199 Sum_probs=51.6
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
++++|+|+ |+||+.+++.+...| ++|++.+++.++++.+.+... ..+ ..+.++..+ +..+ +.
T Consensus 169 ~~V~ViG~-G~iG~~~a~~a~~~G----a~V~~~d~~~~~l~~~~~~~g--~~~---~~~~~~~~~-l~~~-------l~ 230 (377)
T 2vhw_A 169 ADVVVIGA-GTAGYNAARIANGMG----ATVTVLDINIDKLRQLDAEFC--GRI---HTRYSSAYE-LEGA-------VK 230 (377)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHTT--TSS---EEEECCHHH-HHHH-------HH
T ss_pred CEEEEECC-CHHHHHHHHHHHhCC----CEEEEEeCCHHHHHHHHHhcC--Cee---EeccCCHHH-HHHH-------Hc
Confidence 68999998 999999999999999 899999999887766544321 122 233333333 2222 22
Q ss_pred CCCccEEEeccccC
Q psy11190 82 DQGLNVLVNNAGIA 95 (248)
Q Consensus 82 ~~~iD~lv~~ag~~ 95 (248)
..|+||++++..
T Consensus 231 --~aDvVi~~~~~p 242 (377)
T 2vhw_A 231 --RADLVIGAVLVP 242 (377)
T ss_dssp --HCSEEEECCCCT
T ss_pred --CCCEEEECCCcC
Confidence 289999998753
|
| >1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.84 E-value=0.0021 Score=54.00 Aligned_cols=75 Identities=24% Similarity=0.251 Sum_probs=48.9
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhcC
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVKD 82 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~~ 82 (248)
+++|+|++|++|..++..+...| ++|+.+++++++.+.+.++ +.. .+ .|..+.+. .. +.+..+
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~G----a~vi~~~~~~~~~~~~~~l---Ga~-~~--i~~~~~~~---~~---~~~~~~- 214 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRG----YTVEASTGKAAEHDYLRVL---GAK-EV--LAREDVMA---ER---IRPLDK- 214 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTT----CCEEEEESCTTCHHHHHHT---TCS-EE--EECC---------------CCS-
T ss_pred eEEEecCCCHHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHc---CCc-EE--EecCCcHH---HH---HHHhcC-
Confidence 79999999999999999888889 8899999998877665432 111 12 34433211 11 122112
Q ss_pred CCccEEEecccc
Q psy11190 83 QGLNVLVNNAGI 94 (248)
Q Consensus 83 ~~iD~lv~~ag~ 94 (248)
.++|++|.++|.
T Consensus 215 ~~~d~vid~~g~ 226 (328)
T 1xa0_A 215 QRWAAAVDPVGG 226 (328)
T ss_dssp CCEEEEEECSTT
T ss_pred CcccEEEECCcH
Confidence 259999999874
|
| >3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=96.84 E-value=0.0023 Score=49.03 Aligned_cols=73 Identities=19% Similarity=0.147 Sum_probs=51.7
Q ss_pred eEEEecCCCchhHHHHHHHHhC-CCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 3 SILITGCNRGLGLGMIKVLVGL-GNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~-g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
.++|.| .|.+|..+++.|.+. | +.|+++++++++.+.+.+ ..+.++..|.++.+. ... +. ...
T Consensus 41 ~v~IiG-~G~~G~~~a~~L~~~~g----~~V~vid~~~~~~~~~~~-----~g~~~~~gd~~~~~~-l~~----~~-~~~ 104 (183)
T 3c85_A 41 QVLILG-MGRIGTGAYDELRARYG----KISLGIEIREEAAQQHRS-----EGRNVISGDATDPDF-WER----IL-DTG 104 (183)
T ss_dssp SEEEEC-CSHHHHHHHHHHHHHHC----SCEEEEESCHHHHHHHHH-----TTCCEEECCTTCHHH-HHT----BC-SCC
T ss_pred cEEEEC-CCHHHHHHHHHHHhccC----CeEEEEECCHHHHHHHHH-----CCCCEEEcCCCCHHH-HHh----cc-CCC
Confidence 578887 599999999999998 9 899999999877655432 135567788877544 221 10 012
Q ss_pred CCCccEEEeccc
Q psy11190 82 DQGLNVLVNNAG 93 (248)
Q Consensus 82 ~~~iD~lv~~ag 93 (248)
+.|.+|.+.+
T Consensus 105 --~ad~vi~~~~ 114 (183)
T 3c85_A 105 --HVKLVLLAMP 114 (183)
T ss_dssp --CCCEEEECCS
T ss_pred --CCCEEEEeCC
Confidence 4899998765
|
| >3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} | Back alignment and structure |
|---|
Probab=96.83 E-value=0.004 Score=53.13 Aligned_cols=81 Identities=15% Similarity=0.149 Sum_probs=54.8
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCce-EEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAH-IFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
+++||+|+ |++|...+..+...| ++ |+++++++++.+.+.++ . ..+.....|-.+. ..+.+.+.+..
T Consensus 181 ~~VlV~Ga-G~vG~~aiqlak~~G----a~~Vi~~~~~~~~~~~a~~l-~--~~~~~~~~~~~~~----~~~~~~v~~~t 248 (363)
T 3m6i_A 181 DPVLICGA-GPIGLITMLCAKAAG----ACPLVITDIDEGRLKFAKEI-C--PEVVTHKVERLSA----EESAKKIVESF 248 (363)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTT----CCSEEEEESCHHHHHHHHHH-C--TTCEEEECCSCCH----HHHHHHHHHHT
T ss_pred CEEEEECC-CHHHHHHHHHHHHcC----CCEEEEECCCHHHHHHHHHh-c--hhcccccccccch----HHHHHHHHHHh
Confidence 47899998 999999998888888 65 99999998887765554 2 2333333332222 33444555554
Q ss_pred cCCCccEEEecccc
Q psy11190 81 KDQGLNVLVNNAGI 94 (248)
Q Consensus 81 ~~~~iD~lv~~ag~ 94 (248)
+..++|++|.++|.
T Consensus 249 ~g~g~Dvvid~~g~ 262 (363)
T 3m6i_A 249 GGIEPAVALECTGV 262 (363)
T ss_dssp SSCCCSEEEECSCC
T ss_pred CCCCCCEEEECCCC
Confidence 33369999999874
|
| >3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis} | Back alignment and structure |
|---|
Probab=96.82 E-value=0.01 Score=49.96 Aligned_cols=118 Identities=14% Similarity=0.176 Sum_probs=71.3
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH-HHHHhh----cCCceeEEeeccCCchhhhhHHHHh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL-LALAQQ----HSNLHVIELDVTDFSKQQDVLFKDI 76 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~-~~~~~~----~~~~~~~~~D~~~~~~~v~~~~~~i 76 (248)
+.+.|+| +|.+|.+++..|+..|. + .|++.++++++++.. .++... .....+... .+.+. +
T Consensus 6 ~kI~iiG-aG~vG~~~a~~l~~~~~--~-~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t--~d~~a--------~ 71 (321)
T 3p7m_A 6 KKITLVG-AGNIGGTLAHLALIKQL--G-DVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGT--NDYKD--------L 71 (321)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTC--C-EEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCGGG--------G
T ss_pred CEEEEEC-CCHHHHHHHHHHHhCCC--c-eEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEc--CCHHH--------H
Confidence 4678888 59999999999999982 2 999999998876543 222211 112222111 11111 1
Q ss_pred hhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecC
Q psy11190 77 SDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSI 156 (248)
Q Consensus 77 ~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~ 156 (248)
. +.|++|..+|..... ..+..++ +. -...+.+.+.+.+.+.. +++.++++|.+
T Consensus 72 ----~--~aDvVIi~ag~p~k~----G~~R~dl---~~----~N~~i~~~i~~~i~~~~----------p~a~vivvtNP 124 (321)
T 3p7m_A 72 ----E--NSDVVIVTAGVPRKP----GMSRDDL---LG----INIKVMQTVGEGIKHNC----------PNAFVICITNP 124 (321)
T ss_dssp ----T--TCSEEEECCSCCCCT----TCCHHHH---HH----HHHHHHHHHHHHHHHHC----------TTCEEEECCSS
T ss_pred ----C--CCCEEEEcCCcCCCC----CCCHHHH---HH----HhHHHHHHHHHHHHHHC----------CCcEEEEecCc
Confidence 1 389999999875321 1233332 22 24455666666666643 57889999877
Q ss_pred CCcc
Q psy11190 157 MGSI 160 (248)
Q Consensus 157 ~~~~ 160 (248)
....
T Consensus 125 vd~~ 128 (321)
T 3p7m_A 125 LDIM 128 (321)
T ss_dssp HHHH
T ss_pred hHHH
Confidence 6543
|
| >3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1 | Back alignment and structure |
|---|
Probab=96.80 E-value=0.0099 Score=50.17 Aligned_cols=118 Identities=14% Similarity=0.095 Sum_probs=71.6
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH-HHHHhhcC---CceeE-EeeccCCchhhhhHHHHh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL-LALAQQHS---NLHVI-ELDVTDFSKQQDVLFKDI 76 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~-~~~~~~~~---~~~~~-~~D~~~~~~~v~~~~~~i 76 (248)
+.+.|+|+ |.+|..++..|+.+|. ...|++.+.+.++++.. .++..... ...+. ..|..+
T Consensus 22 ~kV~ViGa-G~vG~~~a~~la~~g~--~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~------------ 86 (330)
T 3ldh_A 22 NKITVVGC-DAVGMADAISVLMKDL--ADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV------------ 86 (330)
T ss_dssp CEEEEEST-THHHHHHHHHHHHHCC--CSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS------------
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC--CCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH------------
Confidence 46888898 9999999999999882 23899999988776654 23322111 11111 112221
Q ss_pred hhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecC
Q psy11190 77 SDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSI 156 (248)
Q Consensus 77 ~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~ 156 (248)
+. +.|++|..||..... .++.++ .+. -...+.+.+.+.+.+.. +++.++++|.+
T Consensus 87 ---~~--daDiVIitaG~p~kp----G~tR~d---ll~----~N~~I~k~i~~~I~k~~----------P~a~ilvvtNP 140 (330)
T 3ldh_A 87 ---SA--GSKLVVITAGARQQE----GESRLN---LVQ----RNVNIFKFIIPNIVKHS----------PDCLKELHPEL 140 (330)
T ss_dssp ---CS--SCSEEEECCSCCCCS----SCCTTG---GGH----HHHHHHHHHHHHHHHHC----------TTCEEEECSSS
T ss_pred ---hC--CCCEEEEeCCCCCCC----CCCHHH---HHH----hhHHHHHHHHHHHHhhC----------CCceEEeCCCc
Confidence 11 389999999975431 122222 222 33345566666665542 68889999987
Q ss_pred CCcc
Q psy11190 157 MGSI 160 (248)
Q Consensus 157 ~~~~ 160 (248)
....
T Consensus 141 vdi~ 144 (330)
T 3ldh_A 141 GTDK 144 (330)
T ss_dssp HHHH
T ss_pred cHHH
Confidence 6543
|
| >3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=96.73 E-value=0.01 Score=49.75 Aligned_cols=117 Identities=17% Similarity=0.200 Sum_probs=69.2
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCc-eEEEeecC--chhHHHH-HHHHhhc----CCceeEEeeccCCchhhhhHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPA-HIFATCRN--KDKAVEL-LALAQQH----SNLHVIELDVTDFSKQQDVLF 73 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~-~V~~~~r~--~~~~~~~-~~~~~~~----~~~~~~~~D~~~~~~~v~~~~ 73 (248)
+.+.|+|+ |.+|..++..|+.+| . .|++.+++ .+.++.. .++.... ....+... ++.+.
T Consensus 9 ~kv~ViGa-G~vG~~ia~~l~~~g----~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t--~d~~a------ 75 (315)
T 3tl2_A 9 KKVSVIGA-GFTGATTAFLLAQKE----LADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGT--SDYAD------ 75 (315)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTT----CCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEE--SCGGG------
T ss_pred CEEEEECC-CHHHHHHHHHHHhCC----CCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEc--CCHHH------
Confidence 46888996 999999999999999 6 99999999 4443332 2222111 11111111 11111
Q ss_pred HHhhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEe
Q psy11190 74 KDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNV 153 (248)
Q Consensus 74 ~~i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~v 153 (248)
+. +.|++|.++|..... ..+..++ +. ....+.+.+.+.+.+.. +++.++++
T Consensus 76 ------~~--~aDvVIiaag~p~kp----g~~R~dl---~~----~N~~i~~~i~~~i~~~~----------p~a~vlvv 126 (315)
T 3tl2_A 76 ------TA--DSDVVVITAGIARKP----GMSRDDL---VA----TNSKIMKSITRDIAKHS----------PNAIIVVL 126 (315)
T ss_dssp ------GT--TCSEEEECCSCCCCT----TCCHHHH---HH----HHHHHHHHHHHHHHHHC----------TTCEEEEC
T ss_pred ------hC--CCCEEEEeCCCCCCC----CCCHHHH---HH----HHHHHHHHHHHHHHHhC----------CCeEEEEC
Confidence 12 399999999975331 2233332 22 23345566666665542 57889999
Q ss_pred ecCCCcc
Q psy11190 154 SSIMGSI 160 (248)
Q Consensus 154 ss~~~~~ 160 (248)
|.+....
T Consensus 127 sNPvd~~ 133 (315)
T 3tl2_A 127 TNPVDAM 133 (315)
T ss_dssp CSSHHHH
T ss_pred CChHHHH
Confidence 9776443
|
| >2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.73 E-value=0.0045 Score=53.13 Aligned_cols=75 Identities=25% Similarity=0.411 Sum_probs=49.6
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
++++|+||+|++|..++..+...| ++|+.+++ .++.+.+.++ +.. ...|..+.+. .+. +.+. +
T Consensus 185 ~~VlV~Ga~G~vG~~~~qla~~~G----a~Vi~~~~-~~~~~~~~~l---Ga~---~v~~~~~~~~-~~~----~~~~-~ 247 (375)
T 2vn8_A 185 KRVLILGASGGVGTFAIQVMKAWD----AHVTAVCS-QDASELVRKL---GAD---DVIDYKSGSV-EEQ----LKSL-K 247 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT----CEEEEEEC-GGGHHHHHHT---TCS---EEEETTSSCH-HHH----HHTS-C
T ss_pred CEEEEECCCCHHHHHHHHHHHhCC----CEEEEEeC-hHHHHHHHHc---CCC---EEEECCchHH-HHH----Hhhc-C
Confidence 479999999999999999888888 88988884 4554433222 111 1245554332 322 3332 2
Q ss_pred CCCccEEEeccccC
Q psy11190 82 DQGLNVLVNNAGIA 95 (248)
Q Consensus 82 ~~~iD~lv~~ag~~ 95 (248)
++|++|.++|..
T Consensus 248 --g~D~vid~~g~~ 259 (375)
T 2vn8_A 248 --PFDFILDNVGGS 259 (375)
T ss_dssp --CBSEEEESSCTT
T ss_pred --CCCEEEECCCCh
Confidence 599999999853
|
| >1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=96.66 E-value=0.022 Score=47.82 Aligned_cols=118 Identities=12% Similarity=0.143 Sum_probs=70.6
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH-HHHHhhc---CCceeEEeeccCCchhhhhHHHHhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL-LALAQQH---SNLHVIELDVTDFSKQQDVLFKDIS 77 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~-~~~~~~~---~~~~~~~~D~~~~~~~v~~~~~~i~ 77 (248)
+.+.|+|+ |.+|..++..|+.++. ...|++.+.+.++++.. .++.... ..+.+. .| +.
T Consensus 6 ~KI~IiGa-G~vG~~~a~~l~~~~~--~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~-~~--~~------------ 67 (318)
T 1ez4_A 6 QKVVLVGD-GAVGSSYAFAMAQQGI--AEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIY-SG--EY------------ 67 (318)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTC--CSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEE-EC--CG------------
T ss_pred CEEEEECC-CHHHHHHHHHHHcCCC--CCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEE-EC--CH------------
Confidence 36889998 9999999999998882 35899999998877754 3333221 122222 11 11
Q ss_pred hhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCC
Q psy11190 78 DVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIM 157 (248)
Q Consensus 78 ~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~ 157 (248)
+.+. +.|++|..+|...... .+..+ . +.-..-+.+.+.+.+.+.. +++.++++|.+.
T Consensus 68 ~a~~--~aDvVii~ag~~~~~g----~~R~d---l----~~~n~~i~~~i~~~i~~~~----------p~a~iiv~tNPv 124 (318)
T 1ez4_A 68 SDCK--DADLVVITAGAPQKPG----ESRLD---L----VNKNLNILSSIVKPVVDSG----------FDGIFLVAANPV 124 (318)
T ss_dssp GGGT--TCSEEEECCCC-----------------C----HHHHHHHHHHHHHHHHHTT----------CCSEEEECSSSH
T ss_pred HHhC--CCCEEEECCCCCCCCC----CCHHH---H----HHHHHHHHHHHHHHHHHhC----------CCeEEEEeCCcH
Confidence 1122 3899999998754311 12211 2 2334445666666666643 688999998877
Q ss_pred Ccc
Q psy11190 158 GSI 160 (248)
Q Consensus 158 ~~~ 160 (248)
...
T Consensus 125 ~~~ 127 (318)
T 1ez4_A 125 DIL 127 (318)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
|
| >1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A* | Back alignment and structure |
|---|
Probab=96.65 E-value=0.021 Score=47.86 Aligned_cols=117 Identities=11% Similarity=0.146 Sum_probs=70.2
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH-HHHHhhcC----CceeEEeeccCCchhhhhHHHHh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL-LALAQQHS----NLHVIELDVTDFSKQQDVLFKDI 76 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~-~~~~~~~~----~~~~~~~D~~~~~~~v~~~~~~i 76 (248)
+++.|+|+ |.+|..++..|+.+|. ...|++.+++.+.++.. .++..... .+.+. . .+.+
T Consensus 7 ~kI~IIGa-G~vG~sla~~l~~~~~--~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~-~--~~~~---------- 70 (316)
T 1ldn_A 7 ARVVVIGA-GFVGASYVFALMNQGI--ADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIW-H--GDYD---------- 70 (316)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTC--CSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEE-E--CCGG----------
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCC--CCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEE-c--CcHH----------
Confidence 46889998 9999999999998872 25899999998755543 33332211 12222 1 1111
Q ss_pred hhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecC
Q psy11190 77 SDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSI 156 (248)
Q Consensus 77 ~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~ 156 (248)
.+. +.|++|.++|...... .+..+ .+. -...+.+.+.+.+.+.. +++.++++|.+
T Consensus 71 --al~--~aDvViia~~~~~~~g----~~r~d---l~~----~n~~i~~~i~~~i~~~~----------p~a~~iv~tNP 125 (316)
T 1ldn_A 71 --DCR--DADLVVICAGANQKPG----ETRLD---LVD----KNIAIFRSIVESVMASG----------FQGLFLVATNP 125 (316)
T ss_dssp --GTT--TCSEEEECCSCCCCTT----TCSGG---GHH----HHHHHHHHHHHHHHHHT----------CCSEEEECSSS
T ss_pred --HhC--CCCEEEEcCCCCCCCC----CCHHH---HHH----cChHHHHHHHHHHHHHC----------CCCEEEEeCCc
Confidence 122 3899999998754311 12222 122 22445666666666542 57778888776
Q ss_pred CCc
Q psy11190 157 MGS 159 (248)
Q Consensus 157 ~~~ 159 (248)
...
T Consensus 126 v~~ 128 (316)
T 1ldn_A 126 VDI 128 (316)
T ss_dssp HHH
T ss_pred hHH
Confidence 543
|
| >1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A* | Back alignment and structure |
|---|
Probab=96.57 E-value=0.0023 Score=53.85 Aligned_cols=41 Identities=29% Similarity=0.391 Sum_probs=35.8
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHH
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA 47 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~ 47 (248)
+++|+|++|++|..++..+...| ++|+.+++++++.+.+.+
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~G----a~vi~~~~~~~~~~~~~~ 193 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKRG----YDVVASTGNREAADYLKQ 193 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHHT----CCEEEEESSSSTHHHHHH
T ss_pred eEEEECCCCHHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHH
Confidence 79999999999999999888889 889999999887765544
|
| >3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A* | Back alignment and structure |
|---|
Probab=96.56 E-value=0.0086 Score=50.20 Aligned_cols=121 Identities=17% Similarity=0.269 Sum_probs=68.9
Q ss_pred CceEEEecCCCchhHHHHHHHHhC-CCCCCceEEEeecCchhHHHH-HHHHhhcCCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGL-GNNQPAHIFATCRNKDKAVEL-LALAQQHSNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~-g~~~~~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
|| +.|+||+|.+|..++..|+.+ + ....+++++.+. +.+-. .++......+.+... .++ +. .+
T Consensus 1 mK-V~IiGAaG~VG~~~a~~L~~~~~--~~~el~L~Di~~-~~~G~a~Dl~~~~~~~~v~~~-~~~-~~---------~~ 65 (312)
T 3hhp_A 1 MK-VAVLGAAGGIGQALALLLKTQLP--SGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGF-SGE-DA---------TP 65 (312)
T ss_dssp CE-EEEETTTSHHHHHHHHHHHHHSC--TTEEEEEECSST-THHHHHHHHHTSCSSEEEEEE-CSS-CC---------HH
T ss_pred CE-EEEECCCCHHHHHHHHHHHhCCC--CCceEEEEecCC-CchhHHHHhhCCCCCceEEEe-cCC-Cc---------HH
Confidence 54 778899999999999999875 4 236899999987 33322 333321111111110 011 11 11
Q ss_pred hhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 79 VVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
.+. +.|++|..||.... ..++.+++ ++.| ..+.+.+.+.+.+.. +++.++++|.+..
T Consensus 66 ~~~--~aDivii~ag~~rk----pG~~R~dl---l~~N----~~I~~~i~~~i~~~~----------p~a~vlvvtNPvd 122 (312)
T 3hhp_A 66 ALE--GADVVLISAGVARK----PGMDRSDL---FNVN----AGIVKNLVQQVAKTC----------PKACIGIITNPVN 122 (312)
T ss_dssp HHT--TCSEEEECCSCSCC----TTCCHHHH---HHHH----HHHHHHHHHHHHHHC----------TTSEEEECSSCHH
T ss_pred HhC--CCCEEEEeCCCCCC----CCCCHHHH---HHHH----HHHHHHHHHHHHHHC----------CCcEEEEecCcch
Confidence 122 39999999997532 12344332 3333 345555555555542 5788999988764
Q ss_pred c
Q psy11190 159 S 159 (248)
Q Consensus 159 ~ 159 (248)
.
T Consensus 123 ~ 123 (312)
T 3hhp_A 123 T 123 (312)
T ss_dssp H
T ss_pred h
Confidence 4
|
| >2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A | Back alignment and structure |
|---|
Probab=96.55 E-value=0.051 Score=45.41 Aligned_cols=117 Identities=15% Similarity=0.170 Sum_probs=72.5
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH-HHHHhhc---CCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL-LALAQQH---SNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~-~~~~~~~---~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
.+.|+|+ |.+|..++..|+.++ ....|++.+.+.++++.. .++.... ..+.+. . .+.+.
T Consensus 2 KI~IiGa-G~vG~~~a~~l~~~~--~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~-~--~~~~a----------- 64 (310)
T 2xxj_A 2 KVGIVGS-GMVGSATAYALALLG--VAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVW-A--GSYGD----------- 64 (310)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTT--CCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEE-E--CCGGG-----------
T ss_pred EEEEECC-CHHHHHHHHHHHhCC--CCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEE-E--CCHHH-----------
Confidence 4777887 999999999999887 346899999998777654 3333211 122222 1 12111
Q ss_pred hhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 79 VVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
+. +.|++|..+|..... ..+..++ +.-..-+.+.+.+.+.+.. +++.++++|.+..
T Consensus 65 -~~--~aD~Vii~ag~~~~~----g~~r~dl-------~~~n~~i~~~i~~~i~~~~----------p~a~iiv~tNPv~ 120 (310)
T 2xxj_A 65 -LE--GARAVVLAAGVAQRP----GETRLQL-------LDRNAQVFAQVVPRVLEAA----------PEAVLLVATNPVD 120 (310)
T ss_dssp -GT--TEEEEEECCCCCCCT----TCCHHHH-------HHHHHHHHHHHHHHHHHHC----------TTCEEEECSSSHH
T ss_pred -hC--CCCEEEECCCCCCCC----CcCHHHH-------HHhhHHHHHHHHHHHHHHC----------CCcEEEEecCchH
Confidence 22 389999999875321 2233322 2233445666666666543 6889999988775
Q ss_pred cc
Q psy11190 159 SI 160 (248)
Q Consensus 159 ~~ 160 (248)
..
T Consensus 121 ~~ 122 (310)
T 2xxj_A 121 VM 122 (310)
T ss_dssp HH
T ss_pred HH
Confidence 44
|
| >4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major} | Back alignment and structure |
|---|
Probab=96.55 E-value=0.062 Score=45.58 Aligned_cols=122 Identities=11% Similarity=0.108 Sum_probs=68.3
Q ss_pred eEEEecCCCchhHHHHHHHHhCCC---CCCceEEEeecCchh--HHHH-HHHHhhcCCceeEEeeccCCchhhhhHHHHh
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGN---NQPAHIFATCRNKDK--AVEL-LALAQQHSNLHVIELDVTDFSKQQDVLFKDI 76 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~---~~~~~V~~~~r~~~~--~~~~-~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i 76 (248)
.+.|+||+|+||+.++..|+.... .....+.+++.++.. ++-. .++. ...........+++...
T Consensus 26 KVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~-~~~~~~~~~~~~~~~~~--------- 95 (345)
T 4h7p_A 26 KVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELE-DCAFPLLDKVVVTADPR--------- 95 (345)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHH-HTTCTTEEEEEEESCHH---------
T ss_pred EEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhh-hcCccCCCcEEEcCChH---------
Confidence 589999999999999999987542 011268888886532 2322 2222 11111111222222111
Q ss_pred hhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecC
Q psy11190 77 SDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSI 156 (248)
Q Consensus 77 ~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~ 156 (248)
+.+. +.|++|..||.... ..++.+++ ++ ....+.+.+.+.+.+... ++..|+.+|.+
T Consensus 96 -~a~~--~advVvi~aG~prk----pGmtR~DL---l~----~Na~I~~~~~~~i~~~a~---------~~~~vlvvsNP 152 (345)
T 4h7p_A 96 -VAFD--GVAIAIMCGAFPRK----AGMERKDL---LE----MNARIFKEQGEAIAAVAA---------SDCRVVVVGNP 152 (345)
T ss_dssp -HHTT--TCSEEEECCCCCCC----TTCCHHHH---HH----HHHHHHHHHHHHHHHHSC---------TTCEEEECSSS
T ss_pred -HHhC--CCCEEEECCCCCCC----CCCCHHHH---HH----HhHHHHHHHHHHHHhhcc---------CceEEEEeCCC
Confidence 1222 48999999997543 12455554 33 334566666666665321 35567778776
Q ss_pred C
Q psy11190 157 M 157 (248)
Q Consensus 157 ~ 157 (248)
.
T Consensus 153 v 153 (345)
T 4h7p_A 153 A 153 (345)
T ss_dssp H
T ss_pred c
Confidence 5
|
| >1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.55 E-value=0.0087 Score=50.81 Aligned_cols=77 Identities=18% Similarity=0.267 Sum_probs=50.8
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccC-CchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTD-FSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~v~~~~~~i~~~~ 80 (248)
+++||+|+ |++|..++..+...| ++|+++++++++.+.+.++ +.. ...|..+ .+. .+. +.+..
T Consensus 170 ~~VlV~Ga-G~vG~~a~qla~~~G----a~Vi~~~~~~~~~~~~~~l---Ga~---~~~~~~~~~~~-~~~----i~~~~ 233 (352)
T 1e3j_A 170 TTVLVIGA-GPIGLVSVLAAKAYG----AFVVCTARSPRRLEVAKNC---GAD---VTLVVDPAKEE-ESS----IIERI 233 (352)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHT---TCS---EEEECCTTTSC-HHH----HHHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHHcC----CEEEEEcCCHHHHHHHHHh---CCC---EEEcCcccccH-HHH----HHHHh
Confidence 47999997 899999998888888 7899999988776654432 111 2245543 232 333 33322
Q ss_pred c---CCCccEEEecccc
Q psy11190 81 K---DQGLNVLVNNAGI 94 (248)
Q Consensus 81 ~---~~~iD~lv~~ag~ 94 (248)
+ ..++|++|.++|.
T Consensus 234 ~~~~g~g~D~vid~~g~ 250 (352)
T 1e3j_A 234 RSAIGDLPNVTIDCSGN 250 (352)
T ss_dssp HHHSSSCCSEEEECSCC
T ss_pred ccccCCCCCEEEECCCC
Confidence 2 1259999999874
|
| >2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=96.53 E-value=0.021 Score=47.56 Aligned_cols=38 Identities=21% Similarity=0.206 Sum_probs=32.1
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCc--eEEEeecCchhHHHH
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPA--HIFATCRNKDKAVEL 45 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~--~V~~~~r~~~~~~~~ 45 (248)
++.|+|+ |.+|..++..|+.+| . .|++.++++++++..
T Consensus 2 kI~VIGa-G~vG~~la~~la~~g----~~~eV~L~D~~~~~~~~~ 41 (304)
T 2v6b_A 2 KVGVVGT-GFVGSTAAFALVLRG----SCSELVLVDRDEDRAQAE 41 (304)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTT----CCSEEEEECSSHHHHHHH
T ss_pred EEEEECC-CHHHHHHHHHHHhCC----CCCEEEEEeCCHHHHHHH
Confidence 4677787 999999999999999 6 899999998766543
|
| >1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A* | Back alignment and structure |
|---|
Probab=96.52 E-value=0.036 Score=46.30 Aligned_cols=117 Identities=17% Similarity=0.179 Sum_probs=66.1
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH-HHHHhh----cCCceeEEeeccCCchhhhhHHHHh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL-LALAQQ----HSNLHVIELDVTDFSKQQDVLFKDI 76 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~-~~~~~~----~~~~~~~~~D~~~~~~~v~~~~~~i 76 (248)
+++.|+|+ |.+|..++..|+.+|. ..|++.+.++++++.. .++... .....+.. .+|.+.
T Consensus 3 ~kI~VIGa-G~vG~~~a~~la~~g~---~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~--t~d~~a--------- 67 (309)
T 1ur5_A 3 KKISIIGA-GFVGSTTAHWLAAKEL---GDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTG--TNNYAD--------- 67 (309)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTC---SEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEE--ESCGGG---------
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCC---CeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEE--CCCHHH---------
Confidence 46889998 9999999999999993 2799999998776643 222211 01111111 012111
Q ss_pred hhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecC
Q psy11190 77 SDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSI 156 (248)
Q Consensus 77 ~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~ 156 (248)
+. +.|++|.++|...... .+..++ +.-...+.+.+.+.+.+.. +++.++++|.+
T Consensus 68 ---~~--~aD~Vi~a~g~p~~~g----~~r~dl-------~~~n~~i~~~i~~~i~~~~----------p~a~vi~~tNP 121 (309)
T 1ur5_A 68 ---TA--NSDVIVVTSGAPRKPG----MSREDL-------IKVNADITRACISQAAPLS----------PNAVIIMVNNP 121 (309)
T ss_dssp ---GT--TCSEEEECCCC------------CHH-------HHHHHHHHHHHHHHHGGGC----------TTCEEEECCSS
T ss_pred ---HC--CCCEEEEcCCCCCCCC----CCHHHH-------HHHHHHHHHHHHHHHHhhC----------CCeEEEEcCCc
Confidence 12 3899999998753211 111111 2233345566666666542 46777777766
Q ss_pred CCc
Q psy11190 157 MGS 159 (248)
Q Consensus 157 ~~~ 159 (248)
.+.
T Consensus 122 v~~ 124 (309)
T 1ur5_A 122 LDA 124 (309)
T ss_dssp HHH
T ss_pred hHH
Confidence 543
|
| >3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber} | Back alignment and structure |
|---|
Probab=96.50 E-value=0.0081 Score=50.41 Aligned_cols=119 Identities=11% Similarity=0.173 Sum_probs=69.5
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH-HHHHhh----cCCceeEEeeccCCchhhhhHHHH
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL-LALAQQ----HSNLHVIELDVTDFSKQQDVLFKD 75 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~-~~~~~~----~~~~~~~~~D~~~~~~~v~~~~~~ 75 (248)
|| +.|+|+ |.+|..++..|+..|. ...|++.++++++++.. .++... .....+... .+.+.
T Consensus 1 Mk-v~ViGa-G~vG~~~a~~l~~~~~--~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~--~~~~a-------- 66 (314)
T 3nep_X 1 MK-VTVIGA-GNVGATVAECVARQDV--AKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGT--NDYGP-------- 66 (314)
T ss_dssp CE-EEEECC-SHHHHHHHHHHHHHTC--SSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEE--SSSGG--------
T ss_pred CE-EEEECC-CHHHHHHHHHHHhCCC--CCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEEC--CCHHH--------
Confidence 65 667786 9999999999999882 23899999998775533 222211 112222211 12222
Q ss_pred hhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeec
Q psy11190 76 ISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSS 155 (248)
Q Consensus 76 i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss 155 (248)
+ . +.|++|.++|..... .++..++ +. ....+.+.+.+.+.+.. +++.++++|.
T Consensus 67 ~----~--~aDvVii~ag~~~kp----G~~R~dl---~~----~N~~i~~~i~~~i~~~~----------p~a~vivvtN 119 (314)
T 3nep_X 67 T----E--DSDVCIITAGLPRSP----GMSRDDL---LA----KNTEIVGGVTEQFVEGS----------PDSTIIVVAN 119 (314)
T ss_dssp G----T--TCSEEEECCCC-----------CHHH---HH----HHHHHHHHHHHHHHTTC----------TTCEEEECCS
T ss_pred h----C--CCCEEEECCCCCCCC----CCCHHHH---HH----hhHHHHHHHHHHHHHhC----------CCcEEEecCC
Confidence 1 1 389999999975321 1233222 22 33455666666666543 6788999998
Q ss_pred CCCcc
Q psy11190 156 IMGSI 160 (248)
Q Consensus 156 ~~~~~ 160 (248)
+....
T Consensus 120 Pvd~~ 124 (314)
T 3nep_X 120 PLDVM 124 (314)
T ss_dssp SHHHH
T ss_pred chhHH
Confidence 76543
|
| >2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A | Back alignment and structure |
|---|
Probab=96.49 E-value=0.005 Score=49.11 Aligned_cols=54 Identities=19% Similarity=0.188 Sum_probs=43.4
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCch
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSK 67 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 67 (248)
+.++|.|+ |.+|+.+++.|.++| . |++++++++..+.+. ..+.++.+|.++.+.
T Consensus 10 ~~viI~G~-G~~G~~la~~L~~~g----~-v~vid~~~~~~~~~~------~~~~~i~gd~~~~~~ 63 (234)
T 2aef_A 10 RHVVICGW-SESTLECLRELRGSE----V-FVLAEDENVRKKVLR------SGANFVHGDPTRVSD 63 (234)
T ss_dssp CEEEEESC-CHHHHHHHHHSTTSE----E-EEEESCGGGHHHHHH------TTCEEEESCTTCHHH
T ss_pred CEEEEECC-ChHHHHHHHHHHhCC----e-EEEEECCHHHHHHHh------cCCeEEEcCCCCHHH
Confidence 46889987 899999999999988 8 999999987765442 347788888887654
|
| >4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=96.46 E-value=0.0078 Score=51.41 Aligned_cols=76 Identities=16% Similarity=0.218 Sum_probs=49.2
Q ss_pred ceEEEecCCCchhHHHHHHHHh-CCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVG-LGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~-~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
+++||+||+|++|...+..+.. .| ++|+.+++++++.+.+.++ +.. .+ .|..+ + . .+.+.+..
T Consensus 173 ~~VlV~Ga~G~vG~~a~qlak~~~g----~~Vi~~~~~~~~~~~~~~l---Gad-~v--i~~~~--~-~---~~~v~~~~ 236 (363)
T 4dvj_A 173 PAILIVGGAGGVGSIAVQIARQRTD----LTVIATASRPETQEWVKSL---GAH-HV--IDHSK--P-L---AAEVAALG 236 (363)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHHCC----SEEEEECSSHHHHHHHHHT---TCS-EE--ECTTS--C-H---HHHHHTTC
T ss_pred CEEEEECCCCHHHHHHHHHHHHhcC----CEEEEEeCCHHHHHHHHHc---CCC-EE--EeCCC--C-H---HHHHHHhc
Confidence 3799999999999987765544 46 8999999998876655432 111 11 33332 2 2 23344432
Q ss_pred cCCCccEEEecccc
Q psy11190 81 KDQGLNVLVNNAGI 94 (248)
Q Consensus 81 ~~~~iD~lv~~ag~ 94 (248)
+ .++|++|.++|.
T Consensus 237 ~-~g~Dvvid~~g~ 249 (363)
T 4dvj_A 237 L-GAPAFVFSTTHT 249 (363)
T ss_dssp S-CCEEEEEECSCH
T ss_pred C-CCceEEEECCCc
Confidence 2 369999999874
|
| >1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.46 E-value=0.0096 Score=50.99 Aligned_cols=77 Identities=18% Similarity=0.219 Sum_probs=51.1
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCc-eEEEeecCchhHHHHHHHHhhcCCceeEEeeccCC-chhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPA-HIFATCRNKDKAVELLALAQQHSNLHVIELDVTDF-SKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~v~~~~~~i~~~ 79 (248)
+++||+|+ |++|..++..+...| + +|+.+++++++.+.+.++. .. ...|..+. ++ +... +.+.
T Consensus 194 ~~VlV~Ga-G~vG~~a~qla~~~G----a~~Vi~~~~~~~~~~~~~~lG---a~---~vi~~~~~~~~-~~~~---~~~~ 258 (374)
T 1cdo_A 194 STCAVFGL-GAVGLAAVMGCHSAG----AKRIIAVDLNPDKFEKAKVFG---AT---DFVNPNDHSEP-ISQV---LSKM 258 (374)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTT----CSEEEEECSCGGGHHHHHHTT---CC---EEECGGGCSSC-HHHH---HHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHHcC----CCEEEEEcCCHHHHHHHHHhC---Cc---eEEeccccchh-HHHH---HHHH
Confidence 47999995 999999998888888 6 8999999988876554321 11 12455431 23 3333 3332
Q ss_pred hcCCCccEEEecccc
Q psy11190 80 VKDQGLNVLVNNAGI 94 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~ 94 (248)
.+ +++|++|.++|.
T Consensus 259 ~~-~g~D~vid~~g~ 272 (374)
T 1cdo_A 259 TN-GGVDFSLECVGN 272 (374)
T ss_dssp HT-SCBSEEEECSCC
T ss_pred hC-CCCCEEEECCCC
Confidence 22 259999999874
|
| >1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A | Back alignment and structure |
|---|
Probab=96.45 E-value=0.0083 Score=51.11 Aligned_cols=85 Identities=12% Similarity=0.095 Sum_probs=49.7
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh-
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV- 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~- 80 (248)
.++||+||+|++|...+..+...| ++|+.++++.++..+..+.....+--.+ .|..+.. ...+.+.+.+..
T Consensus 169 ~~VlV~Ga~G~vG~~aiqlak~~G----a~vi~~~~~~~~~~~~~~~~~~lGa~~v--i~~~~~~--~~~~~~~i~~~t~ 240 (364)
T 1gu7_A 169 DWFIQNGGTSAVGKYASQIGKLLN----FNSISVIRDRPNLDEVVASLKELGATQV--ITEDQNN--SREFGPTIKEWIK 240 (364)
T ss_dssp CEEEESCTTSHHHHHHHHHHHHHT----CEEEEEECCCTTHHHHHHHHHHHTCSEE--EEHHHHH--CGGGHHHHHHHHH
T ss_pred cEEEECCCCcHHHHHHHHHHHHCC----CEEEEEecCccccHHHHHHHHhcCCeEE--EecCccc--hHHHHHHHHHHhh
Confidence 589999999999999888887788 8899988776653222111111121112 2332200 012233344332
Q ss_pred -cCCCccEEEecccc
Q psy11190 81 -KDQGLNVLVNNAGI 94 (248)
Q Consensus 81 -~~~~iD~lv~~ag~ 94 (248)
+..++|++|.++|.
T Consensus 241 ~~~~g~Dvvid~~G~ 255 (364)
T 1gu7_A 241 QSGGEAKLALNCVGG 255 (364)
T ss_dssp HHTCCEEEEEESSCH
T ss_pred ccCCCceEEEECCCc
Confidence 11259999999874
|
| >1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A | Back alignment and structure |
|---|
Probab=96.44 E-value=0.012 Score=50.00 Aligned_cols=79 Identities=14% Similarity=0.257 Sum_probs=50.8
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCc-eEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPA-HIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
.++||+|+ |++|...+..+...| + +|+++++++++.+.+.++ +.. .+ .|..+. + ...+.+.+.+..
T Consensus 173 ~~VlV~Ga-G~vG~~aiqlak~~G----a~~Vi~~~~~~~~~~~a~~l---Ga~-~v--i~~~~~-~-~~~~~~~i~~~~ 239 (356)
T 1pl8_A 173 HKVLVCGA-GPIGMVTLLVAKAMG----AAQVVVTDLSATRLSKAKEI---GAD-LV--LQISKE-S-PQEIARKVEGQL 239 (356)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTT----CSEEEEEESCHHHHHHHHHT---TCS-EE--EECSSC-C-HHHHHHHHHHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHHcC----CCEEEEECCCHHHHHHHHHh---CCC-EE--EcCccc-c-cchHHHHHHHHh
Confidence 47999996 899999888888788 6 899999988776554432 111 22 344310 0 122233444443
Q ss_pred cCCCccEEEecccc
Q psy11190 81 KDQGLNVLVNNAGI 94 (248)
Q Consensus 81 ~~~~iD~lv~~ag~ 94 (248)
+ .++|++|.++|.
T Consensus 240 ~-~g~D~vid~~g~ 252 (356)
T 1pl8_A 240 G-CKPEVTIECTGA 252 (356)
T ss_dssp T-SCCSEEEECSCC
T ss_pred C-CCCCEEEECCCC
Confidence 3 359999999874
|
| >2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=96.41 E-value=0.024 Score=47.78 Aligned_cols=117 Identities=16% Similarity=0.163 Sum_probs=71.2
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH-HHHHhhc---CCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL-LALAQQH---SNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~-~~~~~~~---~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
.+.|+|+ |.+|..++..|+.++. ...|++.+.+.++++.. .++.... ..+.+. .| +.+.
T Consensus 11 KI~IiGa-G~vG~~la~~l~~~~~--~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~~--~~~a----------- 73 (326)
T 2zqz_A 11 KVILVGD-GAVGSSYAYAMVLQGI--AQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIY-SA--EYSD----------- 73 (326)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHTC--CSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEE-EC--CGGG-----------
T ss_pred EEEEECC-CHHHHHHHHHHHcCCC--CCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEE-EC--CHHH-----------
Confidence 5888898 9999999999998882 35899999998777654 3333211 122222 11 1111
Q ss_pred hhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 79 VVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
+. +.|++|..+|..... ..+..++ +.-..-+.+.+.+.+.+.. +++.++++|.+..
T Consensus 74 -~~--~aDvVii~ag~~~k~----g~~R~dl-------~~~n~~i~~~i~~~i~~~~----------p~a~iiv~tNPv~ 129 (326)
T 2zqz_A 74 -AK--DADLVVITAGAPQKP----GETRLDL-------VNKNLKILKSIVDPIVDSG----------FNGIFLVAANPVD 129 (326)
T ss_dssp -GG--GCSEEEECCCCC---------CHHHH-------HHHHHHHHHHHHHHHHHHT----------CCSEEEECSSSHH
T ss_pred -hC--CCCEEEEcCCCCCCC----CCCHHHH-------HHHHHHHHHHHHHHHHHHC----------CCeEEEEeCCcHH
Confidence 22 389999999875321 1233322 2233445666666666543 6889999988775
Q ss_pred cc
Q psy11190 159 SI 160 (248)
Q Consensus 159 ~~ 160 (248)
..
T Consensus 130 ~~ 131 (326)
T 2zqz_A 130 IL 131 (326)
T ss_dssp HH
T ss_pred HH
Confidence 43
|
| >1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A* | Back alignment and structure |
|---|
Probab=96.41 E-value=0.0051 Score=48.15 Aligned_cols=42 Identities=29% Similarity=0.378 Sum_probs=35.8
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA 47 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~ 47 (248)
++++|+||+|.+|.++++.|+++| ++|++++|+.++.+.+.+
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g----~~V~~~~r~~~~~~~~~~ 42 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLG----HEIVVGSRREEKAEAKAA 42 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTT----CEEEEEESSHHHHHHHHH
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHH
Confidence 147888999999999999999999 899999999887766543
|
| >1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.39 E-value=0.014 Score=50.03 Aligned_cols=81 Identities=19% Similarity=0.290 Sum_probs=51.6
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
+++||+| +|++|..++..+...|+ ++|+.+++++++.+.+.++ +.. .+ .|....++ ..+.+.+.+..+
T Consensus 197 ~~VlV~G-aG~vG~~aiqlak~~Ga---~~Vi~~~~~~~~~~~~~~l---Ga~-~v--i~~~~~~~--~~~~~~v~~~~~ 264 (380)
T 1vj0_A 197 KTVVIQG-AGPLGLFGVVIARSLGA---ENVIVIAGSPNRLKLAEEI---GAD-LT--LNRRETSV--EERRKAIMDITH 264 (380)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTB---SEEEEEESCHHHHHHHHHT---TCS-EE--EETTTSCH--HHHHHHHHHHTT
T ss_pred CEEEEEC-cCHHHHHHHHHHHHcCC---ceEEEEcCCHHHHHHHHHc---CCc-EE--EeccccCc--chHHHHHHHHhC
Confidence 4799999 89999999988887883 4999999998776655432 111 12 34331001 122333444433
Q ss_pred CCCccEEEecccc
Q psy11190 82 DQGLNVLVNNAGI 94 (248)
Q Consensus 82 ~~~iD~lv~~ag~ 94 (248)
..++|++|.++|.
T Consensus 265 g~g~Dvvid~~g~ 277 (380)
T 1vj0_A 265 GRGADFILEATGD 277 (380)
T ss_dssp TSCEEEEEECSSC
T ss_pred CCCCcEEEECCCC
Confidence 2259999999984
|
| >3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=96.35 E-value=0.015 Score=50.43 Aligned_cols=77 Identities=18% Similarity=0.318 Sum_probs=52.0
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCc-eEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPA-HIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
.++||+|+ |++|...+..+...| + +|+.+++++++++.+.++. .. . ..|..+.+. . +.+.+..
T Consensus 215 ~~VlV~Ga-G~vG~~aiqlak~~G----a~~Vi~~~~~~~~~~~~~~lG---a~-~--vi~~~~~~~-~----~~i~~~t 278 (404)
T 3ip1_A 215 DNVVILGG-GPIGLAAVAILKHAG----ASKVILSEPSEVRRNLAKELG---AD-H--VIDPTKENF-V----EAVLDYT 278 (404)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTT----CSEEEEECSCHHHHHHHHHHT---CS-E--EECTTTSCH-H----HHHHHHT
T ss_pred CEEEEECC-CHHHHHHHHHHHHcC----CCEEEEECCCHHHHHHHHHcC---CC-E--EEcCCCCCH-H----HHHHHHh
Confidence 47999998 999999988888888 6 8999999988766554442 11 1 234444332 2 3344433
Q ss_pred cCCCccEEEecccc
Q psy11190 81 KDQGLNVLVNNAGI 94 (248)
Q Consensus 81 ~~~~iD~lv~~ag~ 94 (248)
+..++|++|.++|.
T Consensus 279 ~g~g~D~vid~~g~ 292 (404)
T 3ip1_A 279 NGLGAKLFLEATGV 292 (404)
T ss_dssp TTCCCSEEEECSSC
T ss_pred CCCCCCEEEECCCC
Confidence 32359999999885
|
| >1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B* | Back alignment and structure |
|---|
Probab=96.34 E-value=0.021 Score=46.12 Aligned_cols=34 Identities=24% Similarity=0.321 Sum_probs=29.5
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNK 39 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~ 39 (248)
++++|.|+ ||+|..+++.|++.|. .++.+++++.
T Consensus 32 ~~VlVvG~-Gg~G~~va~~La~~Gv---~~i~lvD~d~ 65 (249)
T 1jw9_B 32 SRVLIVGL-GGLGCAASQYLASAGV---GNLTLLDFDT 65 (249)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTC---SEEEEECCCB
T ss_pred CeEEEEee-CHHHHHHHHHHHHcCC---CeEEEEcCCC
Confidence 46888885 7999999999999994 5899999987
|
| >2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... | Back alignment and structure |
|---|
Probab=96.33 E-value=0.012 Score=50.32 Aligned_cols=77 Identities=19% Similarity=0.294 Sum_probs=51.0
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCc-eEEEeecCchhHHHHHHHHhhcCCceeEEeeccCC-chhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPA-HIFATCRNKDKAVELLALAQQHSNLHVIELDVTDF-SKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~v~~~~~~i~~~ 79 (248)
+++||+|+ |++|..++..+...| + +|+.+++++++.+.+.++. .. ...|..+. ++ +... +.+.
T Consensus 193 ~~VlV~Ga-G~vG~~a~qla~~~G----a~~Vi~~~~~~~~~~~~~~lG---a~---~vi~~~~~~~~-~~~~---~~~~ 257 (374)
T 2jhf_A 193 STCAVFGL-GGVGLSVIMGCKAAG----AARIIGVDINKDKFAKAKEVG---AT---ECVNPQDYKKP-IQEV---LTEM 257 (374)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTT----CSEEEEECSCGGGHHHHHHTT---CS---EEECGGGCSSC-HHHH---HHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHHcC----CCeEEEEcCCHHHHHHHHHhC---Cc---eEecccccchh-HHHH---HHHH
Confidence 47999995 999999999888888 6 8999999988876554321 11 12455431 23 3322 3332
Q ss_pred hcCCCccEEEecccc
Q psy11190 80 VKDQGLNVLVNNAGI 94 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~ 94 (248)
.+ +++|++|.++|.
T Consensus 258 ~~-~g~D~vid~~g~ 271 (374)
T 2jhf_A 258 SN-GGVDFSFEVIGR 271 (374)
T ss_dssp TT-SCBSEEEECSCC
T ss_pred hC-CCCcEEEECCCC
Confidence 22 259999999874
|
| >2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* | Back alignment and structure |
|---|
Probab=96.33 E-value=0.012 Score=50.36 Aligned_cols=77 Identities=21% Similarity=0.254 Sum_probs=51.1
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCc-eEEEeecCchhHHHHHHHHhhcCCceeEEeeccCC-chhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPA-HIFATCRNKDKAVELLALAQQHSNLHVIELDVTDF-SKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~v~~~~~~i~~~ 79 (248)
+++||+|+ |++|..++..+...| + +|+.+++++++.+.+.++. .. . ..|..+. ++ +.. .+.+.
T Consensus 192 ~~VlV~Ga-G~vG~~avqla~~~G----a~~Vi~~~~~~~~~~~~~~lG---a~-~--vi~~~~~~~~-~~~---~v~~~ 256 (373)
T 2fzw_A 192 SVCAVFGL-GGVGLAVIMGCKVAG----ASRIIGVDINKDKFARAKEFG---AT-E--CINPQDFSKP-IQE---VLIEM 256 (373)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHT----CSEEEEECSCGGGHHHHHHHT---CS-E--EECGGGCSSC-HHH---HHHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHHcC----CCeEEEEcCCHHHHHHHHHcC---Cc-e--Eecccccccc-HHH---HHHHH
Confidence 47999995 999999998888888 6 8999999988876654432 11 1 2354431 22 222 23333
Q ss_pred hcCCCccEEEecccc
Q psy11190 80 VKDQGLNVLVNNAGI 94 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~ 94 (248)
.+ +++|++|.++|.
T Consensus 257 ~~-~g~D~vid~~g~ 270 (373)
T 2fzw_A 257 TD-GGVDYSFECIGN 270 (373)
T ss_dssp TT-SCBSEEEECSCC
T ss_pred hC-CCCCEEEECCCc
Confidence 22 259999999874
|
| >1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A* | Back alignment and structure |
|---|
Probab=96.31 E-value=0.099 Score=43.87 Aligned_cols=40 Identities=15% Similarity=0.089 Sum_probs=33.6
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL 45 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~ 45 (248)
+++.|+|+ |.+|..++..|+.+|. ..|++.+.++++++..
T Consensus 5 ~kI~VIGa-G~vG~~ia~~la~~g~---~~v~L~Di~~~~l~~~ 44 (322)
T 1t2d_A 5 AKIVLVGS-GMIGGVMATLIVQKNL---GDVVLFDIVKNMPHGK 44 (322)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTC---CEEEEECSSSSHHHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC---CeEEEEeCCHHHHHHH
Confidence 46888898 9999999999999992 2799999998877644
|
| >1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* | Back alignment and structure |
|---|
Probab=96.30 E-value=0.013 Score=50.09 Aligned_cols=77 Identities=22% Similarity=0.213 Sum_probs=50.7
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCc-eEEEeecCchhHHHHHHHHhhcCCceeEEeeccCC-chhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPA-HIFATCRNKDKAVELLALAQQHSNLHVIELDVTDF-SKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~v~~~~~~i~~~ 79 (248)
.+++|+|+ |++|..++..+...| + +|+.+++++++.+.+.++. .. ...|..+. ++ +.. .+.+.
T Consensus 197 ~~VlV~Ga-G~vG~~aiqlak~~G----a~~Vi~~~~~~~~~~~a~~lG---a~---~vi~~~~~~~~-~~~---~v~~~ 261 (376)
T 1e3i_A 197 STCAVFGL-GCVGLSAIIGCKIAG----ASRIIAIDINGEKFPKAKALG---AT---DCLNPRELDKP-VQD---VITEL 261 (376)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTT----CSEEEEECSCGGGHHHHHHTT---CS---EEECGGGCSSC-HHH---HHHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHHcC----CCeEEEEcCCHHHHHHHHHhC---Cc---EEEccccccch-HHH---HHHHH
Confidence 47999995 999999988888888 6 8999999988866554321 11 12455431 22 222 23333
Q ss_pred hcCCCccEEEecccc
Q psy11190 80 VKDQGLNVLVNNAGI 94 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~ 94 (248)
.+. ++|++|.++|.
T Consensus 262 ~~~-g~Dvvid~~G~ 275 (376)
T 1e3i_A 262 TAG-GVDYSLDCAGT 275 (376)
T ss_dssp HTS-CBSEEEESSCC
T ss_pred hCC-CccEEEECCCC
Confidence 222 59999999874
|
| >1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A | Back alignment and structure |
|---|
Probab=96.29 E-value=0.0089 Score=50.92 Aligned_cols=72 Identities=17% Similarity=0.254 Sum_probs=50.8
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCC-chhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDF-SKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~v~~~~~~i~~~~ 80 (248)
+++||+|+ |++|..++..+...| ++|+.+++++++.+.+.++. .. . ..|..+. +. .+ .+.
T Consensus 181 ~~VlV~Ga-G~vG~~~~qlak~~G----a~Vi~~~~~~~~~~~~~~lG---a~-~--v~~~~~~~~~-~~----~~~--- 241 (360)
T 1piw_A 181 KKVGIVGL-GGIGSMGTLISKAMG----AETYVISRSSRKREDAMKMG---AD-H--YIATLEEGDW-GE----KYF--- 241 (360)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHT----CEEEEEESSSTTHHHHHHHT---CS-E--EEEGGGTSCH-HH----HSC---
T ss_pred CEEEEECC-CHHHHHHHHHHHHCC----CEEEEEcCCHHHHHHHHHcC---CC-E--EEcCcCchHH-HH----Hhh---
Confidence 47999999 999999998888888 88999999988877655432 11 1 2455443 22 22 222
Q ss_pred cCCCccEEEecccc
Q psy11190 81 KDQGLNVLVNNAGI 94 (248)
Q Consensus 81 ~~~~iD~lv~~ag~ 94 (248)
+ ++|++|.++|.
T Consensus 242 ~--~~D~vid~~g~ 253 (360)
T 1piw_A 242 D--TFDLIVVCASS 253 (360)
T ss_dssp S--CEEEEEECCSC
T ss_pred c--CCCEEEECCCC
Confidence 2 59999999985
|
| >3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* | Back alignment and structure |
|---|
Probab=96.26 E-value=0.016 Score=48.90 Aligned_cols=74 Identities=18% Similarity=0.222 Sum_probs=51.1
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
+++||+|+ |++|...+..+...| ++|+.+++++++.+.+.++. .. ...|..+.+. .+.+ .+..+
T Consensus 168 ~~VlV~Ga-G~vG~~a~qla~~~G----a~Vi~~~~~~~~~~~~~~lG---a~---~~i~~~~~~~-~~~~----~~~~g 231 (340)
T 3s2e_A 168 QWVVISGI-GGLGHVAVQYARAMG----LRVAAVDIDDAKLNLARRLG---AE---VAVNARDTDP-AAWL----QKEIG 231 (340)
T ss_dssp SEEEEECC-STTHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHTT---CS---EEEETTTSCH-HHHH----HHHHS
T ss_pred CEEEEECC-CHHHHHHHHHHHHCC----CeEEEEeCCHHHHHHHHHcC---CC---EEEeCCCcCH-HHHH----HHhCC
Confidence 47899987 899999998888889 89999999988766554331 11 1245555443 3333 33223
Q ss_pred CCCccEEEeccc
Q psy11190 82 DQGLNVLVNNAG 93 (248)
Q Consensus 82 ~~~iD~lv~~ag 93 (248)
++|++|.++|
T Consensus 232 --~~d~vid~~g 241 (340)
T 3s2e_A 232 --GAHGVLVTAV 241 (340)
T ss_dssp --SEEEEEESSC
T ss_pred --CCCEEEEeCC
Confidence 5999999987
|
| >3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A* | Back alignment and structure |
|---|
Probab=96.22 E-value=0.0091 Score=49.96 Aligned_cols=42 Identities=24% Similarity=0.385 Sum_probs=36.6
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHH
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLAL 48 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~ 48 (248)
++||+|++|++|...+..+...| ++|+.+++++++.+.+.++
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~G----a~Vi~~~~~~~~~~~~~~l 190 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLG----YQVAAVSGRESTHGYLKSL 190 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTT----CCEEEEESCGGGHHHHHHH
T ss_pred eEEEECCCcHHHHHHHHHHHHcC----CEEEEEeCCHHHHHHHHhc
Confidence 49999999999999999998889 8999999998887766543
|
| >2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* | Back alignment and structure |
|---|
Probab=96.22 E-value=0.0048 Score=52.24 Aligned_cols=75 Identities=24% Similarity=0.239 Sum_probs=49.6
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCc-eEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPA-HIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
++++|+|+ |++|..++..+...| + +|+.+++++++.+.+.++ .. ...|..+. + +... +.+..
T Consensus 166 ~~VlV~Ga-G~vG~~~~q~a~~~G----a~~Vi~~~~~~~~~~~~~~l------a~-~v~~~~~~-~-~~~~---~~~~~ 228 (343)
T 2dq4_A 166 KSVLITGA-GPIGLMAAMVVRASG----AGPILVSDPNPYRLAFARPY------AD-RLVNPLEE-D-LLEV---VRRVT 228 (343)
T ss_dssp SCEEEECC-SHHHHHHHHHHHHTT----CCSEEEECSCHHHHGGGTTT------CS-EEECTTTS-C-HHHH---HHHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHHcC----CCEEEEECCCHHHHHHHHHh------HH-hccCcCcc-C-HHHH---HHHhc
Confidence 47999999 999999999888888 7 899999987765433221 11 12454442 2 2222 22222
Q ss_pred cCCCccEEEecccc
Q psy11190 81 KDQGLNVLVNNAGI 94 (248)
Q Consensus 81 ~~~~iD~lv~~ag~ 94 (248)
+ .++|++|.++|.
T Consensus 229 ~-~g~D~vid~~g~ 241 (343)
T 2dq4_A 229 G-SGVEVLLEFSGN 241 (343)
T ss_dssp S-SCEEEEEECSCC
T ss_pred C-CCCCEEEECCCC
Confidence 2 259999999984
|
| >3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} | Back alignment and structure |
|---|
Probab=96.19 E-value=0.0093 Score=51.26 Aligned_cols=78 Identities=15% Similarity=0.213 Sum_probs=51.7
Q ss_pred ceEEEec-CCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITG-CNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtG-as~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
.+++|.| |+|++|...+..+...| ++|+.+++++++.+.+.++. .. . ..|..+.+. .+. +.+..
T Consensus 172 ~~vlV~gag~G~vG~~a~q~a~~~G----a~Vi~~~~~~~~~~~~~~lG---a~-~--~~~~~~~~~-~~~----v~~~t 236 (379)
T 3iup_A 172 HSALVHTAAASNLGQMLNQICLKDG----IKLVNIVRKQEQADLLKAQG---AV-H--VCNAASPTF-MQD----LTEAL 236 (379)
T ss_dssp CSCEEESSTTSHHHHHHHHHHHHHT----CCEEEEESSHHHHHHHHHTT---CS-C--EEETTSTTH-HHH----HHHHH
T ss_pred CEEEEECCCCCHHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHhCC---Cc-E--EEeCCChHH-HHH----HHHHh
Confidence 3688887 99999999988888889 89999999988766554421 11 1 234444332 222 33322
Q ss_pred cCCCccEEEecccc
Q psy11190 81 KDQGLNVLVNNAGI 94 (248)
Q Consensus 81 ~~~~iD~lv~~ag~ 94 (248)
+..++|++|.++|.
T Consensus 237 ~~~g~d~v~d~~g~ 250 (379)
T 3iup_A 237 VSTGATIAFDATGG 250 (379)
T ss_dssp HHHCCCEEEESCEE
T ss_pred cCCCceEEEECCCc
Confidence 21249999999985
|
| >1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.17 E-value=0.0091 Score=50.88 Aligned_cols=76 Identities=22% Similarity=0.315 Sum_probs=50.4
Q ss_pred ceEEEecCCCchhHHHHHHHHhC-CCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGL-GNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~-g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
.++||+|+ |++|...+..+... | ++|+.+++++++.+.+.++. .. . ..|..+. +.+.+.+..
T Consensus 188 ~~VlV~Ga-G~vG~~avqlak~~~G----a~Vi~~~~~~~~~~~~~~lG---a~-~--vi~~~~~------~~~~v~~~~ 250 (359)
T 1h2b_A 188 AYVAIVGV-GGLGHIAVQLLKVMTP----ATVIALDVKEEKLKLAERLG---AD-H--VVDARRD------PVKQVMELT 250 (359)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHCC----CEEEEEESSHHHHHHHHHTT---CS-E--EEETTSC------HHHHHHHHT
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCC----CeEEEEeCCHHHHHHHHHhC---CC-E--EEeccch------HHHHHHHHh
Confidence 47999999 89999988877777 8 89999999887766554321 11 1 2354443 122233332
Q ss_pred cCCCccEEEecccc
Q psy11190 81 KDQGLNVLVNNAGI 94 (248)
Q Consensus 81 ~~~~iD~lv~~ag~ 94 (248)
+..++|++|.++|.
T Consensus 251 ~g~g~Dvvid~~G~ 264 (359)
T 1h2b_A 251 RGRGVNVAMDFVGS 264 (359)
T ss_dssp TTCCEEEEEESSCC
T ss_pred CCCCCcEEEECCCC
Confidence 21259999999985
|
| >1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=96.17 E-value=0.018 Score=48.28 Aligned_cols=156 Identities=15% Similarity=0.035 Sum_probs=79.2
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH-HHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL-LALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
.+.|+|+ |.+|..++..|+.+|. ...|++.+.+.++++.. .++....... ..+.++. .. .+.+.
T Consensus 9 KI~IiGa-G~vG~~~a~~l~~~~~--~~ev~L~Di~~~~~~g~~~dl~~~~~~~--~~~~i~~-~~---------~~a~~ 73 (318)
T 1y6j_A 9 KVAIIGA-GFVGASAAFTMALRQT--ANELVLIDVFKEKAIGEAMDINHGLPFM--GQMSLYA-GD---------YSDVK 73 (318)
T ss_dssp CEEEECC-SHHHHHHHHHHHHTTC--SSEEEEECCC---CCHHHHHHTTSCCCT--TCEEEC---C---------GGGGT
T ss_pred EEEEECC-CHHHHHHHHHHHhCCC--CCEEEEEeCChHHHHHHHHHHHHhHHhc--CCeEEEE-CC---------HHHhC
Confidence 5788898 9999999999999882 23899999998765543 2222111100 0111111 00 11122
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
+.|++|..+|.... + ..+..+ .+. ....+.+.+.+.+.+.. +++.++++|.+.+...
T Consensus 74 --~aDvVii~~g~p~k--~--g~~r~d---l~~----~n~~i~~~i~~~i~~~~----------p~a~viv~tNPv~~~~ 130 (318)
T 1y6j_A 74 --DCDVIVVTAGANRK--P--GETRLD---LAK----KNVMIAKEVTQNIMKYY----------NHGVILVVSNPVDIIT 130 (318)
T ss_dssp --TCSEEEECCCC----------CHHH---HHH----HHHHHHHHHHHHHHHHC----------CSCEEEECSSSHHHHH
T ss_pred --CCCEEEEcCCCCCC--C--CcCHHH---HHH----hhHHHHHHHHHHHHHhC----------CCcEEEEecCcHHHHH
Confidence 38999999986432 1 123222 222 33344555555555532 6788888887665432
Q ss_pred c-----cCCCCCccchh-hHHHHHHHHHHHHhhcc--CCCeEE
Q psy11190 162 D-----NTQGGFHPYRC-SKAALNAATRSLSIDLK--GDKIIA 196 (248)
Q Consensus 162 ~-----~~~~~~~~y~~-sK~a~~~~~~~la~e~~--~~~i~v 196 (248)
. ...+.....+. +-.-...+-..++..+. +..|+.
T Consensus 131 ~~~~k~s~~p~~rviG~gt~Ld~~r~~~~la~~lgv~~~~v~~ 173 (318)
T 1y6j_A 131 YMIQKWSGLPVGKVIGSGTVLDSIRFRYLLSEKLGVDVKNVHG 173 (318)
T ss_dssp HHHHHHHTCCTTTEEECTTHHHHHHHHHHHHTTTTCCTTTEEC
T ss_pred HHHHHHcCCCHHHEeccCCchHHHHHHHHHHHHhCCCHHHeEE
Confidence 1 01122223333 33333455556665553 344554
|
| >3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* | Back alignment and structure |
|---|
Probab=96.17 E-value=0.021 Score=48.81 Aligned_cols=76 Identities=14% Similarity=0.068 Sum_probs=50.1
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
++++|.|++|++|...+..+...| ++|+.+. ++++.+.+.++ +- . ...|..+.+- .+.+.+..+
T Consensus 166 ~~VlV~Ga~G~vG~~a~qla~~~G----a~Vi~~~-~~~~~~~~~~l----Ga-~-~vi~~~~~~~-----~~~v~~~t~ 229 (371)
T 3gqv_A 166 VYVLVYGGSTATATVTMQMLRLSG----YIPIATC-SPHNFDLAKSR----GA-E-EVFDYRAPNL-----AQTIRTYTK 229 (371)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT----CEEEEEE-CGGGHHHHHHT----TC-S-EEEETTSTTH-----HHHHHHHTT
T ss_pred cEEEEECCCcHHHHHHHHHHHHCC----CEEEEEe-CHHHHHHHHHc----CC-c-EEEECCCchH-----HHHHHHHcc
Confidence 479999999999999999888888 8888886 55565533332 11 1 1245544332 233444433
Q ss_pred CCCccEEEecccc
Q psy11190 82 DQGLNVLVNNAGI 94 (248)
Q Consensus 82 ~~~iD~lv~~ag~ 94 (248)
. ++|++|.++|.
T Consensus 230 g-~~d~v~d~~g~ 241 (371)
T 3gqv_A 230 N-NLRYALDCITN 241 (371)
T ss_dssp T-CCCEEEESSCS
T ss_pred C-CccEEEECCCc
Confidence 2 49999999884
|
| >1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.17 E-value=0.01 Score=51.26 Aligned_cols=79 Identities=15% Similarity=0.208 Sum_probs=51.6
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
+++||.|+ |++|...+..+...|+ ..|+.+++++++++.+.++ + .. ..|.++.+. + .+.+.+..+
T Consensus 187 ~~VlV~Ga-G~vG~~aiqlAk~~Ga---~~Vi~~~~~~~~~~~a~~l---G--a~--~i~~~~~~~-~---~~~v~~~t~ 251 (398)
T 1kol_A 187 STVYVAGA-GPVGLAAAASARLLGA---AVVIVGDLNPARLAHAKAQ---G--FE--IADLSLDTP-L---HEQIAALLG 251 (398)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTC---SEEEEEESCHHHHHHHHHT---T--CE--EEETTSSSC-H---HHHHHHHHS
T ss_pred CEEEEECC-cHHHHHHHHHHHHCCC---CeEEEEcCCHHHHHHHHHc---C--Cc--EEccCCcch-H---HHHHHHHhC
Confidence 47999995 9999998888777882 3799999988776655432 1 22 245554332 2 223333333
Q ss_pred CCCccEEEeccccC
Q psy11190 82 DQGLNVLVNNAGIA 95 (248)
Q Consensus 82 ~~~iD~lv~~ag~~ 95 (248)
..++|++|.++|..
T Consensus 252 g~g~Dvvid~~G~~ 265 (398)
T 1kol_A 252 EPEVDCAVDAVGFE 265 (398)
T ss_dssp SSCEEEEEECCCTT
T ss_pred CCCCCEEEECCCCc
Confidence 22599999999854
|
| >2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A | Back alignment and structure |
|---|
Probab=96.15 E-value=0.1 Score=43.62 Aligned_cols=38 Identities=8% Similarity=0.004 Sum_probs=33.2
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCc-eEEEeecCchhHHHH
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPA-HIFATCRNKDKAVEL 45 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~-~V~~~~r~~~~~~~~ 45 (248)
++.|.|+ |.+|..++..|+..| . .|++.+++++.++..
T Consensus 6 kI~VIGa-G~~G~~ia~~la~~g----~~~V~l~D~~~~~~~~~ 44 (317)
T 2ewd_A 6 KIAVIGS-GQIGGNIAYIVGKDN----LADVVLFDIAEGIPQGK 44 (317)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHT----CCEEEEECSSSSHHHHH
T ss_pred EEEEECC-CHHHHHHHHHHHhCC----CceEEEEeCCchHHHHH
Confidence 6888897 999999999999999 6 899999998776653
|
| >3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=96.15 E-value=0.0086 Score=51.38 Aligned_cols=78 Identities=17% Similarity=0.161 Sum_probs=51.4
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccC-CchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTD-FSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~v~~~~~~i~~~~ 80 (248)
.++||+|+ |++|...+..+...|+ .+|+++++++++++.+.++. .. . ..|..+ .++ +.. .+.+..
T Consensus 195 ~~VlV~Ga-G~vG~~a~q~a~~~Ga---~~Vi~~~~~~~~~~~a~~lG---a~-~--vi~~~~~~~~-~~~---~i~~~~ 260 (378)
T 3uko_A 195 SNVAIFGL-GTVGLAVAEGAKTAGA---SRIIGIDIDSKKYETAKKFG---VN-E--FVNPKDHDKP-IQE---VIVDLT 260 (378)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHHTC---SCEEEECSCTTHHHHHHTTT---CC-E--EECGGGCSSC-HHH---HHHHHT
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCC---CeEEEEcCCHHHHHHHHHcC---Cc-E--EEccccCchh-HHH---HHHHhc
Confidence 47899998 9999999988888883 38999999988876543321 11 1 245442 222 333 333333
Q ss_pred cCCCccEEEecccc
Q psy11190 81 KDQGLNVLVNNAGI 94 (248)
Q Consensus 81 ~~~~iD~lv~~ag~ 94 (248)
+. ++|++|.++|.
T Consensus 261 ~g-g~D~vid~~g~ 273 (378)
T 3uko_A 261 DG-GVDYSFECIGN 273 (378)
T ss_dssp TS-CBSEEEECSCC
T ss_pred CC-CCCEEEECCCC
Confidence 32 59999999884
|
| >1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1 | Back alignment and structure |
|---|
Probab=96.14 E-value=0.016 Score=50.33 Aligned_cols=42 Identities=31% Similarity=0.491 Sum_probs=35.6
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA 47 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~ 47 (248)
++++|.|+ |++|+.+++.|...|+ .+|++++|+.++++++.+
T Consensus 168 ~~VlIiGa-G~iG~~~a~~l~~~G~---~~V~v~~r~~~ra~~la~ 209 (404)
T 1gpj_A 168 KTVLVVGA-GEMGKTVAKSLVDRGV---RAVLVANRTYERAVELAR 209 (404)
T ss_dssp CEEEEESC-CHHHHHHHHHHHHHCC---SEEEEECSSHHHHHHHHH
T ss_pred CEEEEECh-HHHHHHHHHHHHHCCC---CEEEEEeCCHHHHHHHHH
Confidence 58999998 9999999999999992 399999999887765543
|
| >3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A* | Back alignment and structure |
|---|
Probab=96.12 E-value=0.045 Score=45.87 Aligned_cols=117 Identities=14% Similarity=0.137 Sum_probs=70.3
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH-HHHHhhc----CCceeEEeeccCCchhhhhHHHHhh
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL-LALAQQH----SNLHVIELDVTDFSKQQDVLFKDIS 77 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~-~~~~~~~----~~~~~~~~D~~~~~~~v~~~~~~i~ 77 (248)
.+.|+|+ |.+|..++..|+.+|. ...|++.+.+.++++.. .++.... ..+.+. . .+.+
T Consensus 8 KI~IIGa-G~vG~~la~~l~~~~~--~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~-~--~~~~----------- 70 (317)
T 3d0o_A 8 KVVLIGN-GAVGSSYAFSLVNQSI--VDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVK-A--GEYS----------- 70 (317)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHCS--CSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEE-E--CCGG-----------
T ss_pred EEEEECC-CHHHHHHHHHHHhCCC--CCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEE-e--CCHH-----------
Confidence 6888898 9999999999998882 24899999988766543 2222211 122222 1 1111
Q ss_pred hhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCC
Q psy11190 78 DVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIM 157 (248)
Q Consensus 78 ~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~ 157 (248)
.+. +.|++|..+|.... + ..+..+ . +....-+.+.+.+.+.+.. +++.++++|.+.
T Consensus 71 -a~~--~aDvVvi~ag~~~~--~--g~~r~d---l----~~~n~~i~~~i~~~i~~~~----------p~a~viv~tNPv 126 (317)
T 3d0o_A 71 -DCH--DADLVVICAGAAQK--P--GETRLD---L----VSKNLKIFKSIVGEVMASK----------FDGIFLVATNPV 126 (317)
T ss_dssp -GGT--TCSEEEECCCCCCC--T--TCCHHH---H----HHHHHHHHHHHHHHHHHTT----------CCSEEEECSSSH
T ss_pred -HhC--CCCEEEECCCCCCC--C--CCcHHH---H----HHHHHHHHHHHHHHHHHhC----------CCcEEEEecCcH
Confidence 122 38999999987532 1 123222 1 2233445566666666542 678888888766
Q ss_pred Ccc
Q psy11190 158 GSI 160 (248)
Q Consensus 158 ~~~ 160 (248)
...
T Consensus 127 ~~~ 129 (317)
T 3d0o_A 127 DIL 129 (317)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
|
| >1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A* | Back alignment and structure |
|---|
Probab=96.12 E-value=0.01 Score=50.17 Aligned_cols=38 Identities=11% Similarity=-0.085 Sum_probs=33.2
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCc-eEEEeecCchhHHHH
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPA-HIFATCRNKDKAVEL 45 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~-~V~~~~r~~~~~~~~ 45 (248)
.+.|.|+ |.+|..++..|+.+| . .|++.+++++.++..
T Consensus 11 kI~VIGa-G~vG~~lA~~la~~g----~~~V~L~D~~~~~~~~~ 49 (331)
T 1pzg_A 11 KVAMIGS-GMIGGTMGYLCALRE----LADVVLYDVVKGMPEGK 49 (331)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHT----CCEEEEECSSSSHHHHH
T ss_pred EEEEECC-CHHHHHHHHHHHhCC----CCeEEEEECChhHHHHH
Confidence 5788898 999999999999999 5 899999998877663
|
| >2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* | Back alignment and structure |
|---|
Probab=96.11 E-value=0.018 Score=48.96 Aligned_cols=73 Identities=15% Similarity=0.223 Sum_probs=48.7
Q ss_pred ceEEEecCCCchhHHH-HHHH-HhCCCCCCce-EEEeecCch---hHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHH
Q psy11190 2 KSILITGCNRGLGLGM-IKVL-VGLGNNQPAH-IFATCRNKD---KAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKD 75 (248)
Q Consensus 2 k~~lVtGas~giG~~i-a~~l-~~~g~~~~~~-V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~ 75 (248)
++++|+|+ |++|... +..+ ...| ++ |+.++++++ +.+.+.++ ....+ |..+.+ +.. +.+
T Consensus 174 ~~VlV~Ga-G~vG~~a~iqla~k~~G----a~~Vi~~~~~~~~~~~~~~~~~l-----Ga~~v--~~~~~~--~~~-i~~ 238 (357)
T 2b5w_A 174 SSAFVLGN-GSLGLLTLAMLKVDDKG----YENLYCLGRRDRPDPTIDIIEEL-----DATYV--DSRQTP--VED-VPD 238 (357)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHCTTC----CCEEEEEECCCSSCHHHHHHHHT-----TCEEE--ETTTSC--GGG-HHH
T ss_pred CEEEEECC-CHHHHHHHHHHHHHHcC----CcEEEEEeCCcccHHHHHHHHHc-----CCccc--CCCccC--HHH-HHH
Confidence 58999999 9999998 7666 5677 66 999999887 65554332 12223 555433 233 333
Q ss_pred hhhhhcCCCccEEEecccc
Q psy11190 76 ISDVVKDQGLNVLVNNAGI 94 (248)
Q Consensus 76 i~~~~~~~~iD~lv~~ag~ 94 (248)
+ . + ++|++|.++|.
T Consensus 239 ~-~--g--g~Dvvid~~g~ 252 (357)
T 2b5w_A 239 V-Y--E--QMDFIYEATGF 252 (357)
T ss_dssp H-S--C--CEEEEEECSCC
T ss_pred h-C--C--CCCEEEECCCC
Confidence 3 2 2 59999999874
|
| >2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=96.09 E-value=0.082 Score=44.07 Aligned_cols=116 Identities=19% Similarity=0.283 Sum_probs=71.1
Q ss_pred EEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH-HHHHhh----cCCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 4 ILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL-LALAQQ----HSNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 4 ~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~-~~~~~~----~~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
+.|+|+ |.+|..++..|+.+|. ..|++.+.+.++++.. .++... .....+... .|.+.
T Consensus 2 I~IiGa-G~vG~~~a~~l~~~~l---~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~~a----------- 64 (308)
T 2d4a_B 2 ITILGA-GKVGMATAVMLMMRGY---DDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGS--NSYED----------- 64 (308)
T ss_dssp EEEECC-SHHHHHHHHHHHHHTC---SCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE--SCGGG-----------
T ss_pred EEEECc-CHHHHHHHHHHHhCCC---CEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEEC--CCHHH-----------
Confidence 678898 9999999999998882 3799999998876653 232221 112222210 12111
Q ss_pred hhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 79 VVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
+. +.|++|..+|..... ..+..++ +.-..-+.+.+.+.+.+.. +++.++++|.+..
T Consensus 65 -~~--~aD~Vi~~ag~~~k~----G~~r~dl-------~~~n~~i~~~i~~~i~~~~----------p~a~iiv~tNPv~ 120 (308)
T 2d4a_B 65 -MR--GSDIVLVTAGIGRKP----GMTREQL-------LEANANTMADLAEKIKAYA----------KDAIVVITTNPVD 120 (308)
T ss_dssp -GT--TCSEEEECCSCCCCS----SCCTHHH-------HHHHHHHHHHHHHHHHHHC----------TTCEEEECCSSHH
T ss_pred -hC--CCCEEEEeCCCCCCC----CCcHHHH-------HHHHHHHHHHHHHHHHHHC----------CCeEEEEeCCchH
Confidence 11 389999999875431 1233322 3344456667777766642 5788999887665
Q ss_pred cc
Q psy11190 159 SI 160 (248)
Q Consensus 159 ~~ 160 (248)
..
T Consensus 121 ~~ 122 (308)
T 2d4a_B 121 AM 122 (308)
T ss_dssp HH
T ss_pred HH
Confidence 43
|
| >1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2 | Back alignment and structure |
|---|
Probab=96.07 E-value=0.0091 Score=52.94 Aligned_cols=164 Identities=10% Similarity=0.070 Sum_probs=87.7
Q ss_pred eEEEecCCCchhHHHHHHHHhC--CCCC-CceEEEeecCchhHHHHHHHHhh-----cCCceeEEeeccCCchhhhhHHH
Q psy11190 3 SILITGCNRGLGLGMIKVLVGL--GNNQ-PAHIFATCRNKDKAVELLALAQQ-----HSNLHVIELDVTDFSKQQDVLFK 74 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~--g~~~-~~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~v~~~~~ 74 (248)
.+.|.||++..|.+++..|+.+ + . +..|++.++++++++........ .....+... +|.
T Consensus 30 KIaVIGaGsv~~~ala~~L~~~~~~--l~~~eV~L~Di~~e~~~~~~~~~~~~l~~~~~~~~I~~t--~D~--------- 96 (472)
T 1u8x_X 30 SIVIAGGGSTFTPGIVLMLLDHLEE--FPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAAT--TDP--------- 96 (472)
T ss_dssp EEEEECTTSSSHHHHHHHHHHTTTT--SCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEE--SCH---------
T ss_pred EEEEECCCHHHHHHHHHHHHhCCCC--CCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCCEEEEE--CCH---------
Confidence 6788899888888899889988 2 1 27899999999886665332211 112222111 121
Q ss_pred HhhhhhcCCCccEEEeccccCCccccCCCCChhhh-h-----heeeec-------chhhHHHHHHHhHHHHhhhhcccCC
Q psy11190 75 DISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQM-T-----DHFLVN-------VTAPLMLTKTMLPLLKKASEANSAA 141 (248)
Q Consensus 75 ~i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~-~-----~~~~~n-------~~~~~~l~~~~~~~l~~~~~~~~~~ 141 (248)
.+.+. +.|+||..+|...... .+.++. - ...+.+ ..-++-+.+.+.+.+.+..
T Consensus 97 --~eal~--~AD~VViaag~~~~~g----~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~~~------ 162 (472)
T 1u8x_X 97 --EEAFT--DVDFVMAHIRVGKYAM----RALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYS------ 162 (472)
T ss_dssp --HHHHS--SCSEEEECCCTTHHHH----HHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHC------
T ss_pred --HHHHc--CCCEEEEcCCCccccc----cchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHHHC------
Confidence 11122 3899999998753211 111111 0 001110 2223345666667766653
Q ss_pred CCCCCCceEEEeecCCCcccccC---CCCCccchhhHHHHHHHHHHHHhhcc--C-CCeEEEE
Q psy11190 142 PLGSSRAAIVNVSSIMGSIEDNT---QGGFHPYRCSKAALNAATRSLSIDLK--G-DKIIATA 198 (248)
Q Consensus 142 ~~~~~~~~iv~vss~~~~~~~~~---~~~~~~y~~sK~a~~~~~~~la~e~~--~-~~i~v~~ 198 (248)
+++.++++|.+.+.....- .+.....+..-. +..|-..++..+. + ..|.+..
T Consensus 163 ----P~A~ii~~TNPvdi~T~~~~k~~p~~rViG~c~~-~~r~~~~la~~lgv~~~~~v~~~v 220 (472)
T 1u8x_X 163 ----PDAWMLNYSNPAAIVAEATRRLRPNSKILNICDM-PVGIEDRMAQILGLSSRKEMKVRY 220 (472)
T ss_dssp ----TTCEEEECCSCHHHHHHHHHHHSTTCCEEECCSH-HHHHHHHHHHHHTCSCGGGEEEEE
T ss_pred ----CCeEEEEeCCcHHHHHHHHHHhCCCCCEEEeCCc-HHHHHHHHHHHhCcCchhceeEEE
Confidence 6889999998886542200 011122222222 3466666666664 3 4555433
|
| >2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A | Back alignment and structure |
|---|
Probab=96.07 E-value=0.066 Score=44.56 Aligned_cols=154 Identities=12% Similarity=0.083 Sum_probs=80.3
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhc-CCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQH-SNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|+++.|+|+ |.+|..++..|+.+|. ...|++.+.+.+......++.... +++.. . +|.+.
T Consensus 14 ~~kV~ViGa-G~vG~~~a~~l~~~g~--~~ev~L~Di~~~~~g~a~dl~~~~~~~i~~-t---~d~~~------------ 74 (303)
T 2i6t_A 14 VNKITVVGG-GELGIACTLAISAKGI--ADRLVLLDLSEGTKGATMDLEIFNLPNVEI-S---KDLSA------------ 74 (303)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTC--CSEEEEECCC-----CHHHHHHHTCTTEEE-E---SCGGG------------
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCC--CCEEEEEcCCcchHHHHHHHhhhcCCCeEE-e---CCHHH------------
Confidence 456888896 7789999999999881 238999999875211222222211 12222 1 22211
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
+. +.|++|..+|...+ ..+..++ +.-..-+.+.+.+.+.+.. +++.++++|.+...
T Consensus 75 l~--~aD~Vi~aag~~~p-----G~tR~dl-------~~~n~~i~~~i~~~i~~~~----------p~a~iiv~sNP~~~ 130 (303)
T 2i6t_A 75 SA--HSKVVIFTVNSLGS-----SQSYLDV-------VQSNVDMFRALVPALGHYS----------QHSVLLVASQPVEI 130 (303)
T ss_dssp GT--TCSEEEECCCC---------CCHHHH-------HHHHHHHHHHHHHHHHHHT----------TTCEEEECSSSHHH
T ss_pred HC--CCCEEEEcCCCCCC-----CCCHHHH-------HHHHHHHHHHHHHHHHHhC----------CCeEEEEcCChHHH
Confidence 12 38999999987321 1233221 3334446666777766642 57888888886643
Q ss_pred ccc-----cCCCCCccchh-hHHHHHHHHHHHHhhcc--CCCeEEE
Q psy11190 160 IED-----NTQGGFHPYRC-SKAALNAATRSLSIDLK--GDKIIAT 197 (248)
Q Consensus 160 ~~~-----~~~~~~~~y~~-sK~a~~~~~~~la~e~~--~~~i~v~ 197 (248)
... ...+.....+. +-.-...+-..++..+. +..|++.
T Consensus 131 ~t~~~~~~~~~p~~rviG~gt~Ld~~R~~~~la~~lgv~~~~v~~~ 176 (303)
T 2i6t_A 131 MTYVTWKLSTFPANRVIGIGCNLDSQRLQYIITNVLKAQTSGKEVW 176 (303)
T ss_dssp HHHHHHHHHCCCGGGEEECTTHHHHHHHHHHHHHTSCCTTGGGGEE
T ss_pred HHHHHHHhcCCCHHHeeCCCCCchHHHHHHHHHHHcCCChHHeEEE
Confidence 321 01122223333 23233455556665553 3444443
|
| >4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* | Back alignment and structure |
|---|
Probab=96.06 E-value=0.015 Score=49.69 Aligned_cols=79 Identities=18% Similarity=0.261 Sum_probs=50.5
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCc-eEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPA-HIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
+++||+|+ |++|...+..+...| + +|+++++++++.+.+.++. .. ...|.++.+. .+.+ .+.....
T Consensus 184 ~~VlV~Ga-G~vG~~aiqlak~~G----a~~Vi~~~~~~~~~~~a~~lG---a~---~vi~~~~~~~-~~~i-~~~~~~~ 250 (370)
T 4ej6_A 184 STVAILGG-GVIGLLTVQLARLAG----ATTVILSTRQATKRRLAEEVG---AT---ATVDPSAGDV-VEAI-AGPVGLV 250 (370)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTT----CSEEEEECSCHHHHHHHHHHT---CS---EEECTTSSCH-HHHH-HSTTSSS
T ss_pred CEEEEECC-CHHHHHHHHHHHHcC----CCEEEEECCCHHHHHHHHHcC---CC---EEECCCCcCH-HHHH-Hhhhhcc
Confidence 47999998 899999998888889 6 8999999887766444432 11 1235444332 2222 2211122
Q ss_pred cCCCccEEEecccc
Q psy11190 81 KDQGLNVLVNNAGI 94 (248)
Q Consensus 81 ~~~~iD~lv~~ag~ 94 (248)
+. ++|++|.++|.
T Consensus 251 ~g-g~Dvvid~~G~ 263 (370)
T 4ej6_A 251 PG-GVDVVIECAGV 263 (370)
T ss_dssp TT-CEEEEEECSCC
T ss_pred CC-CCCEEEECCCC
Confidence 22 59999999873
|
| >3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A | Back alignment and structure |
|---|
Probab=96.03 E-value=0.014 Score=49.46 Aligned_cols=77 Identities=19% Similarity=0.215 Sum_probs=51.1
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCc-eEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPA-HIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
.+++|+|+ |++|...+..+...| + +|+.+++++++++.+.++. .. ...|..+.+. . +.+.+..
T Consensus 168 ~~VlV~Ga-G~vG~~a~qla~~~G----a~~Vi~~~~~~~~~~~~~~lG---a~---~vi~~~~~~~-~----~~v~~~t 231 (352)
T 3fpc_A 168 DTVCVIGI-GPVGLMSVAGANHLG----AGRIFAVGSRKHCCDIALEYG---AT---DIINYKNGDI-V----EQILKAT 231 (352)
T ss_dssp CCEEEECC-SHHHHHHHHHHHTTT----CSSEEEECCCHHHHHHHHHHT---CC---EEECGGGSCH-H----HHHHHHT
T ss_pred CEEEEECC-CHHHHHHHHHHHHcC----CcEEEEECCCHHHHHHHHHhC---Cc---eEEcCCCcCH-H----HHHHHHc
Confidence 47899985 999999988888888 6 8999999887766554432 11 1234444332 2 3344443
Q ss_pred cCCCccEEEecccc
Q psy11190 81 KDQGLNVLVNNAGI 94 (248)
Q Consensus 81 ~~~~iD~lv~~ag~ 94 (248)
+..++|++|.++|.
T Consensus 232 ~g~g~D~v~d~~g~ 245 (352)
T 3fpc_A 232 DGKGVDKVVIAGGD 245 (352)
T ss_dssp TTCCEEEEEECSSC
T ss_pred CCCCCCEEEECCCC
Confidence 32359999999875
|
| >1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* | Back alignment and structure |
|---|
Probab=96.02 E-value=0.017 Score=49.31 Aligned_cols=77 Identities=23% Similarity=0.323 Sum_probs=50.2
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCc-eEEEeecCchhHHHHHHHHhhcCCceeEEeeccCC-chhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPA-HIFATCRNKDKAVELLALAQQHSNLHVIELDVTDF-SKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~v~~~~~~i~~~ 79 (248)
+++||+|+ |++|..++..+...| + +|+.+++++++.+.+.++. .. . ..|..+. ++ +. +.+.+.
T Consensus 193 ~~VlV~Ga-G~vG~~aiqlak~~G----a~~Vi~~~~~~~~~~~a~~lG---a~-~--vi~~~~~~~~-~~---~~i~~~ 257 (373)
T 1p0f_A 193 STCAVFGL-GGVGFSAIVGCKAAG----ASRIIGVGTHKDKFPKAIELG---AT-E--CLNPKDYDKP-IY---EVICEK 257 (373)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHT----CSEEEEECSCGGGHHHHHHTT---CS-E--EECGGGCSSC-HH---HHHHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHHcC----CCeEEEECCCHHHHHHHHHcC---Cc-E--EEecccccch-HH---HHHHHH
Confidence 47999995 999999888887788 6 8999999988876554321 11 1 2344431 22 22 223333
Q ss_pred hcCCCccEEEecccc
Q psy11190 80 VKDQGLNVLVNNAGI 94 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~ 94 (248)
.+. ++|++|.++|.
T Consensus 258 t~g-g~Dvvid~~g~ 271 (373)
T 1p0f_A 258 TNG-GVDYAVECAGR 271 (373)
T ss_dssp TTS-CBSEEEECSCC
T ss_pred hCC-CCCEEEECCCC
Confidence 222 59999999874
|
| >1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=96.00 E-value=0.039 Score=46.28 Aligned_cols=39 Identities=26% Similarity=0.182 Sum_probs=33.3
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCc--eEEEeecCchhHHHH
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPA--HIFATCRNKDKAVEL 45 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~--~V~~~~r~~~~~~~~ 45 (248)
|| +.|.|+ |.+|..++..|++.| . .|++.++++++++..
T Consensus 1 mk-I~VIGa-G~~G~~la~~l~~~g----~~~~V~l~D~~~~~~~~~ 41 (319)
T 1a5z_A 1 MK-IGIVGL-GRVGSSTAFALLMKG----FAREMVLIDVDKKRAEGD 41 (319)
T ss_dssp CE-EEEECC-SHHHHHHHHHHHHHT----CCSEEEEECSSHHHHHHH
T ss_pred CE-EEEECC-CHHHHHHHHHHHhCC----CCCeEEEEeCChHHHHHH
Confidence 54 667787 999999999999998 6 999999998777665
|
| >1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=95.99 E-value=0.019 Score=49.06 Aligned_cols=72 Identities=22% Similarity=0.301 Sum_probs=49.8
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
.++||+|+ |++|..++..+...| ++|+++++++++.+.+.++. .. ...|..+.+. ++ ++. +
T Consensus 196 ~~VlV~Ga-G~vG~~aiqlak~~G----a~Vi~~~~~~~~~~~a~~lG---a~---~vi~~~~~~~-~~----~~~---~ 256 (369)
T 1uuf_A 196 KKVGVVGI-GGLGHMGIKLAHAMG----AHVVAFTTSEAKREAAKALG---AD---EVVNSRNADE-MA----AHL---K 256 (369)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTT----CEEEEEESSGGGHHHHHHHT---CS---EEEETTCHHH-HH----TTT---T
T ss_pred CEEEEECC-CHHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHcC---Cc---EEeccccHHH-HH----Hhh---c
Confidence 47999997 899999998888888 78999999988877655432 11 1234444322 22 222 2
Q ss_pred CCCccEEEecccc
Q psy11190 82 DQGLNVLVNNAGI 94 (248)
Q Consensus 82 ~~~iD~lv~~ag~ 94 (248)
++|++|.++|.
T Consensus 257 --g~Dvvid~~g~ 267 (369)
T 1uuf_A 257 --SFDFILNTVAA 267 (369)
T ss_dssp --CEEEEEECCSS
T ss_pred --CCCEEEECCCC
Confidence 59999999985
|
| >4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A* | Back alignment and structure |
|---|
Probab=95.97 E-value=0.067 Score=43.88 Aligned_cols=41 Identities=17% Similarity=0.020 Sum_probs=34.8
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA 47 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~ 47 (248)
+++.|.|+ |.+|..+|..|++.| +.|++.+++++.++...+
T Consensus 5 ~kV~VIGa-G~mG~~iA~~la~~G----~~V~l~d~~~~~~~~~~~ 45 (283)
T 4e12_A 5 TNVTVLGT-GVLGSQIAFQTAFHG----FAVTAYDINTDALDAAKK 45 (283)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTT----CEEEEECSSHHHHHHHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHhCC----CeEEEEeCCHHHHHHHHH
Confidence 56777765 789999999999999 899999999988776643
|
| >1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A* | Back alignment and structure |
|---|
Probab=95.95 E-value=0.065 Score=44.68 Aligned_cols=41 Identities=15% Similarity=0.046 Sum_probs=33.3
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL 45 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~ 45 (248)
|| +.|.|+ |.+|..++..|++++ .+..|++.++++++++..
T Consensus 1 mk-I~VIGa-G~vG~~la~~la~~~--~g~~V~l~D~~~~~~~~~ 41 (310)
T 1guz_A 1 MK-ITVIGA-GNVGATTAFRLAEKQ--LARELVLLDVVEGIPQGK 41 (310)
T ss_dssp CE-EEEECC-SHHHHHHHHHHHHTT--CCSEEEEECSSSSHHHHH
T ss_pred CE-EEEECC-CHHHHHHHHHHHhCC--CCCEEEEEeCChhHHHHH
Confidence 54 667787 999999999999863 238999999998877654
|
| >1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T* | Back alignment and structure |
|---|
Probab=95.88 E-value=0.084 Score=43.94 Aligned_cols=37 Identities=14% Similarity=0.187 Sum_probs=32.1
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCc--eEEEeecCchhHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPA--HIFATCRNKDKAV 43 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~--~V~~~~r~~~~~~ 43 (248)
+.+.|.|+ |.+|..++..|++.| . .|++++++.+.++
T Consensus 8 mkI~IiGa-G~vG~~~a~~l~~~g----~~~~V~l~d~~~~~~~ 46 (319)
T 1lld_A 8 TKLAVIGA-GAVGSTLAFAAAQRG----IAREIVLEDIAKERVE 46 (319)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTT----CCSEEEEECSSHHHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHhCC----CCCEEEEEeCChhHHH
Confidence 35788897 999999999999999 6 9999999976655
|
| >2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum} | Back alignment and structure |
|---|
Probab=95.88 E-value=0.14 Score=43.13 Aligned_cols=37 Identities=14% Similarity=0.088 Sum_probs=32.8
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCc-eEEEeecCchhHHH
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPA-HIFATCRNKDKAVE 44 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~-~V~~~~r~~~~~~~ 44 (248)
.+.|+|+ |.+|..+|..|+.+| . .|++.+++++.++.
T Consensus 16 kI~ViGa-G~vG~~iA~~la~~g----~~~V~L~Di~~~~l~~ 53 (328)
T 2hjr_A 16 KISIIGA-GQIGSTIALLLGQKD----LGDVYMFDIIEGVPQG 53 (328)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTT----CCEEEEECSSTTHHHH
T ss_pred EEEEECC-CHHHHHHHHHHHhCC----CCeEEEEECCHHHHHH
Confidence 6888898 999999999999999 5 89999999887765
|
| >1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=95.85 E-value=0.027 Score=48.07 Aligned_cols=76 Identities=18% Similarity=0.240 Sum_probs=49.7
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCc-eEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPA-HIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
+++||+|+ |++|...+..+...| + .|+.+++++++.+.+.++. .. . ..|..+.+. . +.+.+..
T Consensus 192 ~~VlV~Ga-G~vG~~a~qlak~~G----a~~Vi~~~~~~~~~~~a~~lG---a~-~--vi~~~~~~~-~----~~~~~~~ 255 (371)
T 1f8f_A 192 SSFVTWGA-GAVGLSALLAAKVCG----ASIIIAVDIVESRLELAKQLG---AT-H--VINSKTQDP-V----AAIKEIT 255 (371)
T ss_dssp CEEEEESC-SHHHHHHHHHHHHHT----CSEEEEEESCHHHHHHHHHHT---CS-E--EEETTTSCH-H----HHHHHHT
T ss_pred CEEEEECC-CHHHHHHHHHHHHcC----CCeEEEECCCHHHHHHHHHcC---CC-E--EecCCccCH-H----HHHHHhc
Confidence 47999995 999999888877788 6 7999999887766554332 11 1 234444332 2 2233332
Q ss_pred cCCCccEEEecccc
Q psy11190 81 KDQGLNVLVNNAGI 94 (248)
Q Consensus 81 ~~~~iD~lv~~ag~ 94 (248)
+. ++|++|.++|.
T Consensus 256 ~g-g~D~vid~~g~ 268 (371)
T 1f8f_A 256 DG-GVNFALESTGS 268 (371)
T ss_dssp TS-CEEEEEECSCC
T ss_pred CC-CCcEEEECCCC
Confidence 22 59999999874
|
| >1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=95.84 E-value=0.12 Score=42.92 Aligned_cols=43 Identities=19% Similarity=0.142 Sum_probs=35.6
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHH
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELL 46 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~ 46 (248)
|+++.|.| +|.+|..++..|+++|. ...|++.+++.++++.+.
T Consensus 1 m~kI~VIG-aG~~G~~la~~L~~~g~--~~~V~l~d~~~~~~~~~~ 43 (309)
T 1hyh_A 1 ARKIGIIG-LGNVGAAVAHGLIAQGV--ADDYVFIDANEAKVKADQ 43 (309)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHHTC--CSEEEEECSSHHHHHHHH
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCCC--CCEEEEEcCCHHHHHHHH
Confidence 66788888 79999999999998882 258999999988776663
|
| >2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=95.79 E-value=0.013 Score=50.68 Aligned_cols=78 Identities=15% Similarity=0.226 Sum_probs=50.8
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCc-eEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPA-HIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
.++||.|+ |++|...+..+...| + +|+.+++++++++.+.++ + .. ..|..+.+. .. +.+.+..
T Consensus 187 ~~VlV~Ga-G~vG~~aiqlak~~G----a~~Vi~~~~~~~~~~~a~~l----G-a~--~i~~~~~~~-~~---~~~~~~~ 250 (398)
T 2dph_A 187 SHVYIAGA-GPVGRCAAAGARLLG----AACVIVGDQNPERLKLLSDA----G-FE--TIDLRNSAP-LR---DQIDQIL 250 (398)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHT----CSEEEEEESCHHHHHHHHTT----T-CE--EEETTSSSC-HH---HHHHHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHHcC----CCEEEEEcCCHHHHHHHHHc----C-Cc--EEcCCCcch-HH---HHHHHHh
Confidence 47999996 999999888777778 6 999999998776544322 1 22 245544321 12 2233333
Q ss_pred cCCCccEEEeccccC
Q psy11190 81 KDQGLNVLVNNAGIA 95 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~ 95 (248)
+..++|++|.++|..
T Consensus 251 ~g~g~Dvvid~~g~~ 265 (398)
T 2dph_A 251 GKPEVDCGVDAVGFE 265 (398)
T ss_dssp SSSCEEEEEECSCTT
T ss_pred CCCCCCEEEECCCCc
Confidence 322599999999853
|
| >1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A | Back alignment and structure |
|---|
Probab=95.71 E-value=0.03 Score=47.57 Aligned_cols=35 Identities=23% Similarity=0.514 Sum_probs=28.6
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCch
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKD 40 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~ 40 (248)
.++||+||+|++|...+..+...| +.|+.+.+..+
T Consensus 169 ~~VlV~Ga~G~vG~~aiqlak~~G----a~vi~~~~~~~ 203 (357)
T 1zsy_A 169 DSVIQNASNSGVGQAVIQIAAALG----LRTINVVRDRP 203 (357)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHHT----CEEEEEECCCS
T ss_pred CEEEEeCCcCHHHHHHHHHHHHcC----CEEEEEecCcc
Confidence 479999999999999888777778 77877766544
|
| >3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=95.66 E-value=0.025 Score=47.89 Aligned_cols=67 Identities=24% Similarity=0.395 Sum_probs=48.1
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
.++||+|+ |++|...+..+...| ++|+++++++++.+.+.++. .. .++ ++.+. +. +
T Consensus 178 ~~VlV~Ga-G~vG~~a~qla~~~G----a~Vi~~~~~~~~~~~~~~lG---a~-~v~----~~~~~-~~-------~--- 233 (348)
T 3two_A 178 TKVGVAGF-GGLGSMAVKYAVAMG----AEVSVFARNEHKKQDALSMG---VK-HFY----TDPKQ-CK-------E--- 233 (348)
T ss_dssp CEEEEESC-SHHHHHHHHHHHHTT----CEEEEECSSSTTHHHHHHTT---CS-EEE----SSGGG-CC-------S---
T ss_pred CEEEEECC-cHHHHHHHHHHHHCC----CeEEEEeCCHHHHHHHHhcC---CC-eec----CCHHH-Hh-------c---
Confidence 47999997 999999998888888 89999999998877554421 11 222 33333 21 1
Q ss_pred CCCccEEEecccc
Q psy11190 82 DQGLNVLVNNAGI 94 (248)
Q Consensus 82 ~~~iD~lv~~ag~ 94 (248)
++|++|.++|.
T Consensus 234 --~~D~vid~~g~ 244 (348)
T 3two_A 234 --ELDFIISTIPT 244 (348)
T ss_dssp --CEEEEEECCCS
T ss_pred --CCCEEEECCCc
Confidence 39999999885
|
| >3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP} | Back alignment and structure |
|---|
Probab=95.66 E-value=0.017 Score=47.52 Aligned_cols=43 Identities=16% Similarity=0.190 Sum_probs=37.3
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHH
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA 47 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~ 47 (248)
|+++.|.|++|.+|.++++.|++.| ++|++.+|++++.+.+.+
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~g----~~V~~~~r~~~~~~~~~~ 53 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDSA----HHLAAIEIAPEGRDRLQG 53 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHSS----SEEEEECCSHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCC----CEEEEEECCHHHHHHHHh
Confidence 3578999999999999999999999 899999999887766543
|
| >1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A* | Back alignment and structure |
|---|
Probab=95.65 E-value=0.048 Score=47.30 Aligned_cols=40 Identities=20% Similarity=0.234 Sum_probs=34.9
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELL 46 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~ 46 (248)
++++|+|+ |.+|+.+++.+...| +.|++++++.++++.+.
T Consensus 173 ~~V~ViGa-G~iG~~aa~~a~~~G----a~V~v~D~~~~~~~~~~ 212 (401)
T 1x13_A 173 AKVMVIGA-GVAGLAAIGAANSLG----AIVRAFDTRPEVKEQVQ 212 (401)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTT----CEEEEECSCGGGHHHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHHCC----CEEEEEcCCHHHHHHHH
Confidence 57899996 899999999999999 89999999988876653
|
| >1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 | Back alignment and structure |
|---|
Probab=95.61 E-value=0.028 Score=49.86 Aligned_cols=132 Identities=12% Similarity=0.080 Sum_probs=73.1
Q ss_pred eEEEecCCC-chhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhh----cC-CceeEEeeccCCchhhhhHHHHh
Q psy11190 3 SILITGCNR-GLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQ----HS-NLHVIELDVTDFSKQQDVLFKDI 76 (248)
Q Consensus 3 ~~lVtGas~-giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~----~~-~~~~~~~D~~~~~~~v~~~~~~i 76 (248)
.+.|.||++ |.|.+++..|++...-.+..|++.+++++.++........ .. ...+. . .+|..
T Consensus 5 KIaVIGAGsVg~g~ala~~La~~~~l~~~eV~L~Di~~e~l~~~~~~~~~~l~~~~~~~~I~-~-ttD~~---------- 72 (480)
T 1obb_A 5 KIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFE-K-TMNLD---------- 72 (480)
T ss_dssp EEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEE-E-ESCHH----------
T ss_pred EEEEECCCchHHHHHHHHHHHhcCcCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCcEEE-E-ECCHH----------
Confidence 688889999 8999999988854100128999999999887765332211 11 11111 1 01211
Q ss_pred hhhhcCCCccEEEeccccCCccccC--------CCCChhhhhheeee--------cchhhHHHHHHHhHHHHhhhhcccC
Q psy11190 77 SDVVKDQGLNVLVNNAGIAAKFTRL--------GLLKPEQMTDHFLV--------NVTAPLMLTKTMLPLLKKASEANSA 140 (248)
Q Consensus 77 ~~~~~~~~iD~lv~~ag~~~~~~~~--------~~~~~~~~~~~~~~--------n~~~~~~l~~~~~~~l~~~~~~~~~ 140 (248)
+.+. +.|+||..+|........ ..+. ..+++.... ...-++-+.+.+.+.+.+..
T Consensus 73 -eal~--dAD~VIiaagv~~~~~~~~dE~ip~K~g~~-~~l~dt~g~g~~~~G~~~~~rni~i~~~i~~~i~~~~----- 143 (480)
T 1obb_A 73 -DVII--DADFVINTAMVGGHTYLEKVRQIGEKYGYY-RGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLS----- 143 (480)
T ss_dssp -HHHT--TCSEEEECCCTTHHHHHHHHHHHHHHTTCT-TCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHC-----
T ss_pred -HHhC--CCCEEEECCCcccccccccccccccccccc-cchhhhcCCccchhhhHHhhhhHHHHHHHHHHHHHHC-----
Confidence 1112 389999999863210000 0000 001111111 13344556777777777753
Q ss_pred CCCCCCCceEEEeecCCCcc
Q psy11190 141 APLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 141 ~~~~~~~~~iv~vss~~~~~ 160 (248)
+++.++++|.+.+..
T Consensus 144 -----P~A~ii~~TNPvdi~ 158 (480)
T 1obb_A 144 -----PKAWYLQAANPIFEG 158 (480)
T ss_dssp -----TTCEEEECSSCHHHH
T ss_pred -----CCeEEEEeCCcHHHH
Confidence 688899999877544
|
| >2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} | Back alignment and structure |
|---|
Probab=95.58 E-value=0.025 Score=47.71 Aligned_cols=75 Identities=23% Similarity=0.399 Sum_probs=49.2
Q ss_pred ceEEEecCCCchhHHHHHHHHhC--CCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGL--GNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~--g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
+++||+|+ |++|..++..+... | ++|+.+++++++.+.+.++. .. .+ .|..+. ....+++.+
T Consensus 172 ~~VlV~Ga-G~vG~~aiqlak~~~~G----a~Vi~~~~~~~~~~~~~~lG---a~-~v--i~~~~~----~~~~~~~~~- 235 (344)
T 2h6e_A 172 PVVIVNGI-GGLAVYTIQILKALMKN----ITIVGISRSKKHRDFALELG---AD-YV--SEMKDA----ESLINKLTD- 235 (344)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHCTT----CEEEEECSCHHHHHHHHHHT---CS-EE--ECHHHH----HHHHHHHHT-
T ss_pred CEEEEECC-CHHHHHHHHHHHHhcCC----CEEEEEeCCHHHHHHHHHhC---CC-EE--eccccc----hHHHHHhhc-
Confidence 47999999 89999998888777 8 88999999888766554432 11 11 233220 111222322
Q ss_pred hcCCCccEEEecccc
Q psy11190 80 VKDQGLNVLVNNAGI 94 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~ 94 (248)
+ .++|++|.++|.
T Consensus 236 -g-~g~D~vid~~g~ 248 (344)
T 2h6e_A 236 -G-LGASIAIDLVGT 248 (344)
T ss_dssp -T-CCEEEEEESSCC
T ss_pred -C-CCccEEEECCCC
Confidence 2 159999999874
|
| >3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=95.57 E-value=0.032 Score=46.60 Aligned_cols=72 Identities=15% Similarity=0.207 Sum_probs=46.9
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
.+++|+||+|++|...+..+...| ++|+.++++. +.+.+.++ +.. . ..|..+.+...+. + .
T Consensus 154 ~~vlV~Ga~G~vG~~a~q~a~~~G----a~vi~~~~~~-~~~~~~~l---Ga~-~--~i~~~~~~~~~~~----~----~ 214 (321)
T 3tqh_A 154 DVVLIHAGAGGVGHLAIQLAKQKG----TTVITTASKR-NHAFLKAL---GAE-Q--CINYHEEDFLLAI----S----T 214 (321)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTT----CEEEEEECHH-HHHHHHHH---TCS-E--EEETTTSCHHHHC----C----S
T ss_pred CEEEEEcCCcHHHHHHHHHHHHcC----CEEEEEeccc-hHHHHHHc---CCC-E--EEeCCCcchhhhh----c----c
Confidence 479999999999999999998889 8898887543 33322332 111 1 2455554420111 1 2
Q ss_pred CCCccEEEecccc
Q psy11190 82 DQGLNVLVNNAGI 94 (248)
Q Consensus 82 ~~~iD~lv~~ag~ 94 (248)
++|++|.++|.
T Consensus 215 --g~D~v~d~~g~ 225 (321)
T 3tqh_A 215 --PVDAVIDLVGG 225 (321)
T ss_dssp --CEEEEEESSCH
T ss_pred --CCCEEEECCCc
Confidence 49999999884
|
| >3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A* | Back alignment and structure |
|---|
Probab=95.54 E-value=0.044 Score=45.36 Aligned_cols=34 Identities=21% Similarity=0.281 Sum_probs=28.4
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNK 39 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~ 39 (248)
++++|.|+ ||+|..+++.|+..|. -++.+++++.
T Consensus 37 ~~VlVvGa-GGlGs~va~~La~aGV---G~i~lvD~D~ 70 (292)
T 3h8v_A 37 FAVAIVGV-GGVGSVTAEMLTRCGI---GKLLLFDYDK 70 (292)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTC---SEEEEECCCB
T ss_pred CeEEEECc-CHHHHHHHHHHHHcCC---CEEEEECCCc
Confidence 35777764 7999999999999995 6899998876
|
| >3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=95.53 E-value=0.018 Score=47.45 Aligned_cols=40 Identities=20% Similarity=0.323 Sum_probs=35.0
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL 45 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~ 45 (248)
|+++|.|+ ||.|++++..|.+.|+ .+|+++.|+.++++++
T Consensus 123 k~vlvlGa-GGaaraia~~L~~~G~---~~v~v~nRt~~ka~~L 162 (282)
T 3fbt_A 123 NICVVLGS-GGAARAVLQYLKDNFA---KDIYVVTRNPEKTSEI 162 (282)
T ss_dssp SEEEEECS-STTHHHHHHHHHHTTC---SEEEEEESCHHHHHHH
T ss_pred CEEEEECC-cHHHHHHHHHHHHcCC---CEEEEEeCCHHHHHHH
Confidence 67999997 6999999999999993 4999999999887765
|
| >7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A* | Back alignment and structure |
|---|
Probab=95.43 E-value=0.45 Score=40.72 Aligned_cols=123 Identities=7% Similarity=-0.015 Sum_probs=67.2
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCC-ceEEEeecCchh----HHHH-HHHHhhcCCceeEEeeccCCchhhhhHHHHh
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQP-AHIFATCRNKDK----AVEL-LALAQQHSNLHVIELDVTDFSKQQDVLFKDI 76 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~-~~V~~~~r~~~~----~~~~-~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i 76 (248)
.+.|+||+|.+|.+++-.|+..+.-.. ..+++.+.+.+. ++-. .++.. ......-.+.+.+. .
T Consensus 34 KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h-~~~p~~~~v~i~~~-~--------- 102 (375)
T 7mdh_A 34 NIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELED-SLYPLLREVSIGID-P--------- 102 (375)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHT-TTCTTEEEEEEESC-H---------
T ss_pred EEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHh-hhhhhcCCcEEecC-C---------
Confidence 588999999999999999998873100 126665544333 2322 22221 11101112222221 1
Q ss_pred hhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecC
Q psy11190 77 SDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSI 156 (248)
Q Consensus 77 ~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~ 156 (248)
.+.+. +.|++|..||.... ..++..++ ++ ....+.+...+.+.+... +++.++++|.+
T Consensus 103 y~~~~--daDvVVitag~prk----pG~tR~DL---l~----~N~~I~k~i~~~i~~~a~---------p~~ivlVvsNP 160 (375)
T 7mdh_A 103 YEVFE--DVDWALLIGAKPRG----PGMERAAL---LD----INGQIFADQGKALNAVAS---------KNVKVLVVGNP 160 (375)
T ss_dssp HHHTT--TCSEEEECCCCCCC----TTCCHHHH---HH----HHHHHHHHHHHHHHHHSC---------TTCEEEECSSS
T ss_pred HHHhC--CCCEEEEcCCCCCC----CCCCHHHH---HH----HHHHHHHHHHHHHHHhcC---------CCeEEEEecCc
Confidence 11122 38999999986432 12344333 22 334566666666665311 57889999887
Q ss_pred CC
Q psy11190 157 MG 158 (248)
Q Consensus 157 ~~ 158 (248)
..
T Consensus 161 vD 162 (375)
T 7mdh_A 161 CN 162 (375)
T ss_dssp HH
T ss_pred hh
Confidence 53
|
| >4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=95.41 E-value=0.028 Score=49.67 Aligned_cols=74 Identities=24% Similarity=0.263 Sum_probs=52.5
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|| ++|.|+ |-+|+.+|+.|.++| +.|++++++++.++.+.+. -.+.++.+|.++++. .+++
T Consensus 4 M~-iiI~G~-G~vG~~la~~L~~~~----~~v~vId~d~~~~~~~~~~----~~~~~i~Gd~~~~~~-L~~A-------- 64 (461)
T 4g65_A 4 MK-IIILGA-GQVGGTLAENLVGEN----NDITIVDKDGDRLRELQDK----YDLRVVNGHASHPDV-LHEA-------- 64 (461)
T ss_dssp EE-EEEECC-SHHHHHHHHHTCSTT----EEEEEEESCHHHHHHHHHH----SSCEEEESCTTCHHH-HHHH--------
T ss_pred CE-EEEECC-CHHHHHHHHHHHHCC----CCEEEEECCHHHHHHHHHh----cCcEEEEEcCCCHHH-HHhc--------
Confidence 54 566665 789999999999999 9999999998887765432 256778888888665 3321
Q ss_pred cCCCccEEEeccc
Q psy11190 81 KDQGLNVLVNNAG 93 (248)
Q Consensus 81 ~~~~iD~lv~~ag 93 (248)
|-...|++|...+
T Consensus 65 gi~~ad~~ia~t~ 77 (461)
T 4g65_A 65 GAQDADMLVAVTN 77 (461)
T ss_dssp TTTTCSEEEECCS
T ss_pred CCCcCCEEEEEcC
Confidence 1113777776543
|
| >3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=95.40 E-value=0.091 Score=43.10 Aligned_cols=84 Identities=18% Similarity=0.193 Sum_probs=53.3
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCc---eEEEeecCchhHHHHHHHHh---------hcCCceeEEeeccCCchhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPA---HIFATCRNKDKAVELLALAQ---------QHSNLHVIELDVTDFSKQQ 69 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~---~V~~~~r~~~~~~~~~~~~~---------~~~~~~~~~~D~~~~~~~v 69 (248)
+++.|.|+ |.+|.++++.|++.| . +|++++|++++++.+.+... .-....++..-+ .+.. +
T Consensus 4 ~~I~iIG~-G~mG~aia~~l~~~g----~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav-~p~~-~ 76 (280)
T 3tri_A 4 SNITFIGG-GNMARNIVVGLIANG----YDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAV-KPHQ-I 76 (280)
T ss_dssp SCEEEESC-SHHHHHHHHHHHHTT----CCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECS-CGGG-H
T ss_pred CEEEEEcc-cHHHHHHHHHHHHCC----CCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEe-CHHH-H
Confidence 35666666 899999999999999 6 89999999988777643210 001112222222 2344 7
Q ss_pred hhHHHHhhhh-hcCCCcc-EEEeccccC
Q psy11190 70 DVLFKDISDV-VKDQGLN-VLVNNAGIA 95 (248)
Q Consensus 70 ~~~~~~i~~~-~~~~~iD-~lv~~ag~~ 95 (248)
..+++++... +. .+ ++|++++..
T Consensus 77 ~~vl~~l~~~~l~---~~~iiiS~~agi 101 (280)
T 3tri_A 77 KMVCEELKDILSE---TKILVISLAVGV 101 (280)
T ss_dssp HHHHHHHHHHHHT---TTCEEEECCTTC
T ss_pred HHHHHHHHhhccC---CCeEEEEecCCC
Confidence 7777777765 44 34 677665433
|
| >3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A* | Back alignment and structure |
|---|
Probab=95.36 E-value=0.0074 Score=49.72 Aligned_cols=40 Identities=20% Similarity=0.245 Sum_probs=34.2
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL 45 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~ 45 (248)
|+++|+|+ ||+|++++..|++.|+ .+|+++.|+.++++++
T Consensus 118 k~vlvlGa-Gg~g~aia~~L~~~G~---~~v~v~~R~~~~a~~l 157 (277)
T 3don_A 118 AYILILGA-GGASKGIANELYKIVR---PTLTVANRTMSRFNNW 157 (277)
T ss_dssp CCEEEECC-SHHHHHHHHHHHTTCC---SCCEEECSCGGGGTTC
T ss_pred CEEEEECC-cHHHHHHHHHHHHCCC---CEEEEEeCCHHHHHHH
Confidence 57999997 7999999999999993 3899999998876544
|
| >2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* | Back alignment and structure |
|---|
Probab=95.32 E-value=0.026 Score=47.97 Aligned_cols=73 Identities=19% Similarity=0.241 Sum_probs=48.1
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
.+++|+|+ |++|...+..+...| ++|+++++++++.+.+.+.. +.. .+ .|..+.+. + .+..+
T Consensus 182 ~~VlV~Ga-G~vG~~a~qlak~~G----a~Vi~~~~~~~~~~~~~~~l--Ga~-~v--i~~~~~~~-~-------~~~~~ 243 (357)
T 2cf5_A 182 LRGGILGL-GGVGHMGVKIAKAMG----HHVTVISSSNKKREEALQDL--GAD-DY--VIGSDQAK-M-------SELAD 243 (357)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHT----CEEEEEESSTTHHHHHHTTS--CCS-CE--EETTCHHH-H-------HHSTT
T ss_pred CEEEEECC-CHHHHHHHHHHHHCC----CeEEEEeCChHHHHHHHHHc--CCc-ee--eccccHHH-H-------HHhcC
Confidence 47999995 999999998888888 89999999987765443111 111 11 34433222 2 22222
Q ss_pred CCCccEEEecccc
Q psy11190 82 DQGLNVLVNNAGI 94 (248)
Q Consensus 82 ~~~iD~lv~~ag~ 94 (248)
++|++|.++|.
T Consensus 244 --g~D~vid~~g~ 254 (357)
T 2cf5_A 244 --SLDYVIDTVPV 254 (357)
T ss_dssp --TEEEEEECCCS
T ss_pred --CCCEEEECCCC
Confidence 49999999985
|
| >4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} | Back alignment and structure |
|---|
Probab=95.30 E-value=0.079 Score=44.54 Aligned_cols=78 Identities=18% Similarity=0.311 Sum_probs=50.0
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
++++|.|+ |++|...+..+...|+ ..++.+++++++++.+.++. -- ...|.++.+. ....+.+.+.
T Consensus 162 ~~VlV~Ga-G~vG~~aiq~ak~~G~---~~vi~~~~~~~k~~~a~~lG----a~--~~i~~~~~~~--~~~~~~~~~~-- 227 (346)
T 4a2c_A 162 KNVIIIGA-GTIGLLAIQCAVALGA---KSVTAIDISSEKLALAKSFG----AM--QTFNSSEMSA--PQMQSVLREL-- 227 (346)
T ss_dssp SEEEEECC-SHHHHHHHHHHHHTTC---SEEEEEESCHHHHHHHHHTT----CS--EEEETTTSCH--HHHHHHHGGG--
T ss_pred CEEEEECC-CCcchHHHHHHHHcCC---cEEEEEechHHHHHHHHHcC----Ce--EEEeCCCCCH--HHHHHhhccc--
Confidence 47899987 8999999998888884 45677888877765444332 11 2245555432 3333334332
Q ss_pred CCCccEEEecccc
Q psy11190 82 DQGLNVLVNNAGI 94 (248)
Q Consensus 82 ~~~iD~lv~~ag~ 94 (248)
.+.|+++.++|.
T Consensus 228 -~g~d~v~d~~G~ 239 (346)
T 4a2c_A 228 -RFNQLILETAGV 239 (346)
T ss_dssp -CSSEEEEECSCS
T ss_pred -CCcccccccccc
Confidence 248999988874
|
| >1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2 | Back alignment and structure |
|---|
Probab=95.24 E-value=0.04 Score=48.55 Aligned_cols=164 Identities=9% Similarity=0.054 Sum_probs=85.9
Q ss_pred eEEEecCCCchhHHHHHHHHhC--CCCCCceEEEeecCc--hhHHHHHHHHhh-----cCCceeEEeeccCCchhhhhHH
Q psy11190 3 SILITGCNRGLGLGMIKVLVGL--GNNQPAHIFATCRNK--DKAVELLALAQQ-----HSNLHVIELDVTDFSKQQDVLF 73 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~--g~~~~~~V~~~~r~~--~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~v~~~~ 73 (248)
.+.|.||++.+|.+++..|+.+ +- .+..|++.+++. ++++........ .....+... +|.
T Consensus 9 KIaVIGaGsv~~~al~~~L~~~~~~l-~~~ev~L~Di~~~~e~~~~~~~~~~~~~~~~~~~~~i~~t--~D~-------- 77 (450)
T 1s6y_A 9 KIATIGGGSSYTPELVEGLIKRYHEL-PVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLT--LDR-------- 77 (450)
T ss_dssp EEEEETTTCTTHHHHHHHHHHTTTTC-CEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEE--SCH--------
T ss_pred EEEEECCCHHHHHHHHHHHHcCCCCC-CCCEEEEEEcCCChHHHHHHHHHHHHHHhhcCCCcEEEEe--CCH--------
Confidence 5778899888899999999974 20 027899999999 876664222211 112222110 221
Q ss_pred HHhhhhhcCCCccEEEeccccCCccccCCCCChhhh-hhee-----ee-------cchhhHHHHHHHhHHHHhhhhcccC
Q psy11190 74 KDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQM-TDHF-----LV-------NVTAPLMLTKTMLPLLKKASEANSA 140 (248)
Q Consensus 74 ~~i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~-~~~~-----~~-------n~~~~~~l~~~~~~~l~~~~~~~~~ 140 (248)
.+.+. +.|+||..+|...... .+.++. -.-+ +. ...-++-+.+.+.+.+.+..
T Consensus 78 ---~eal~--gAD~VVitagv~~~~~----~~rd~~ip~~~g~~~~et~G~ggi~~~~rni~i~~~i~~~i~~~~----- 143 (450)
T 1s6y_A 78 ---RRALD--GADFVTTQFRVGGLEA----RAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELC----- 143 (450)
T ss_dssp ---HHHHT--TCSEEEECCCTTHHHH----HHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHC-----
T ss_pred ---HHHhC--CCCEEEEcCCCCCCcc----hhhhhhhhhhcCcccccccccchHHHHhhhHHHHHHHHHHHHHHC-----
Confidence 11112 3899999998753211 011110 0000 10 02233445666777777653
Q ss_pred CCCCCCCceEEEeecCCCccccc---CCCCCccchhhHHHHHHHHHHHHhhcc--CCCeEEE
Q psy11190 141 APLGSSRAAIVNVSSIMGSIEDN---TQGGFHPYRCSKAALNAATRSLSIDLK--GDKIIAT 197 (248)
Q Consensus 141 ~~~~~~~~~iv~vss~~~~~~~~---~~~~~~~y~~sK~a~~~~~~~la~e~~--~~~i~v~ 197 (248)
+++.++++|.+.+..... ..+.....+..-. +..|-+.++..+. +..|.+.
T Consensus 144 -----P~a~ii~~tNPvdivT~a~~k~~p~~rViG~c~~-~~r~~~~la~~lgv~~~~v~~~ 199 (450)
T 1s6y_A 144 -----PDAWLINFTNPAGMVTEAVLRYTKQEKVVGLCNV-PIGMRMGVAKLLGVDADRVHID 199 (450)
T ss_dssp -----TTCEEEECSSSHHHHHHHHHHHCCCCCEEECCSH-HHHHHHHHHHHHTSCGGGEEEE
T ss_pred -----CCeEEEEeCCcHHHHHHHHHHhCCCCCEEEeCCc-HHHHHHHHHHHhCCCHHHcEEE
Confidence 688999999887654220 0011122222222 3456666666654 3445443
|
| >3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* | Back alignment and structure |
|---|
Probab=95.22 E-value=0.066 Score=45.10 Aligned_cols=77 Identities=17% Similarity=0.276 Sum_probs=48.8
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
.+++|.|+ |++|...+..+...|. .+|+.+++++++.+.+.++. .. .+ .|..+ + . .+.+.+..+
T Consensus 173 ~~vlv~Ga-G~vG~~a~qla~~~g~---~~Vi~~~~~~~~~~~~~~lG---a~-~~--i~~~~--~-~---~~~v~~~t~ 236 (345)
T 3jv7_A 173 STAVVIGV-GGLGHVGIQILRAVSA---ARVIAVDLDDDRLALAREVG---AD-AA--VKSGA--G-A---ADAIRELTG 236 (345)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHCC---CEEEEEESCHHHHHHHHHTT---CS-EE--EECST--T-H---HHHHHHHHG
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCC---CEEEEEcCCHHHHHHHHHcC---CC-EE--EcCCC--c-H---HHHHHHHhC
Confidence 47899998 9999998777766632 89999999988766554432 11 12 23222 2 2 222333332
Q ss_pred CCCccEEEecccc
Q psy11190 82 DQGLNVLVNNAGI 94 (248)
Q Consensus 82 ~~~iD~lv~~ag~ 94 (248)
..++|++|.++|.
T Consensus 237 g~g~d~v~d~~G~ 249 (345)
T 3jv7_A 237 GQGATAVFDFVGA 249 (345)
T ss_dssp GGCEEEEEESSCC
T ss_pred CCCCeEEEECCCC
Confidence 2259999999884
|
| >1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A* | Back alignment and structure |
|---|
Probab=95.21 E-value=0.085 Score=42.51 Aligned_cols=78 Identities=17% Similarity=0.213 Sum_probs=54.6
Q ss_pred eEEEecCCCchhHHHHHHHHhC-CCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 3 SILITGCNRGLGLGMIKVLVGL-GNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~-g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
++.|.|++|.+|+.+++.+.+. + ..|+......+.++++. .. ... +..|++.++. ....+..+.+.
T Consensus 2 kV~V~Ga~G~mG~~i~~~~~~~~~----~elva~~d~~~dl~~~~---~~--~~D-vvIDfT~p~a-~~~~~~~a~~~-- 68 (245)
T 1p9l_A 2 RVGVLGAKGKVGTTMVRAVAAADD----LTLSAELDAGDPLSLLT---DG--NTE-VVIDFTHPDV-VMGNLEFLIDN-- 68 (245)
T ss_dssp EEEEETTTSHHHHHHHHHHHHCTT----CEEEEEECTTCCTHHHH---HT--TCC-EEEECSCTTT-HHHHHHHHHHT--
T ss_pred EEEEECCCCHHHHHHHHHHHhCCC----CEEEEEEccCCCHHHHh---cc--CCc-EEEEccChHH-HHHHHHHHHHc--
Confidence 4889999999999999999865 6 77775544334444332 11 223 5689999988 77666665543
Q ss_pred CCCccEEEeccccC
Q psy11190 82 DQGLNVLVNNAGIA 95 (248)
Q Consensus 82 ~~~iD~lv~~ag~~ 95 (248)
++++|+...|..
T Consensus 69 --g~~~VigTTG~~ 80 (245)
T 1p9l_A 69 --GIHAVVGTTGFT 80 (245)
T ss_dssp --TCEEEECCCCCC
T ss_pred --CCCEEEcCCCCC
Confidence 589999988854
|
| >4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A* | Back alignment and structure |
|---|
Probab=95.19 E-value=0.081 Score=44.52 Aligned_cols=78 Identities=21% Similarity=0.209 Sum_probs=48.3
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
.+++|.|+ |++|...+..+...+. .+|+.+++++++++...++. .. ...|..+.+. .++ +.+..+
T Consensus 165 ~~VlV~Ga-G~~g~~a~~~a~~~~g---~~Vi~~~~~~~r~~~~~~~G---a~---~~i~~~~~~~-~~~----v~~~t~ 229 (348)
T 4eez_A 165 DWQVIFGA-GGLGNLAIQYAKNVFG---AKVIAVDINQDKLNLAKKIG---AD---VTINSGDVNP-VDE----IKKITG 229 (348)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTSC---CEEEEEESCHHHHHHHHHTT---CS---EEEEC-CCCH-HHH----HHHHTT
T ss_pred CEEEEEcC-CCccHHHHHHHHHhCC---CEEEEEECcHHHhhhhhhcC---Ce---EEEeCCCCCH-HHH----hhhhcC
Confidence 47899987 7788777777776642 89999999988765443332 11 2245555443 333 344333
Q ss_pred CCCccEEEecccc
Q psy11190 82 DQGLNVLVNNAGI 94 (248)
Q Consensus 82 ~~~iD~lv~~ag~ 94 (248)
..++|.++.+++.
T Consensus 230 g~g~d~~~~~~~~ 242 (348)
T 4eez_A 230 GLGVQSAIVCAVA 242 (348)
T ss_dssp SSCEEEEEECCSC
T ss_pred CCCceEEEEeccC
Confidence 2358888888763
|
| >3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str} | Back alignment and structure |
|---|
Probab=95.03 E-value=0.1 Score=44.80 Aligned_cols=41 Identities=22% Similarity=0.190 Sum_probs=35.8
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA 47 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~ 47 (248)
++++|.|+ |.+|..+++.+...| ++|++++++.++++.+.+
T Consensus 185 ~kV~ViG~-G~iG~~aa~~a~~lG----a~V~v~D~~~~~l~~~~~ 225 (381)
T 3p2y_A 185 ASALVLGV-GVAGLQALATAKRLG----AKTTGYDVRPEVAEQVRS 225 (381)
T ss_dssp CEEEEESC-SHHHHHHHHHHHHHT----CEEEEECSSGGGHHHHHH
T ss_pred CEEEEECc-hHHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHH
Confidence 46888888 799999999999999 899999999988777654
|
| >2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A* | Back alignment and structure |
|---|
Probab=94.95 E-value=0.051 Score=44.10 Aligned_cols=41 Identities=22% Similarity=0.319 Sum_probs=34.3
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHH
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLAL 48 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~ 48 (248)
+++|.|+ |++|+++++.|.+.| .+|.+++|+.++.+++.+.
T Consensus 118 ~v~iiG~-G~~g~~~a~~l~~~g----~~v~v~~r~~~~~~~l~~~ 158 (263)
T 2d5c_A 118 PALVLGA-GGAGRAVAFALREAG----LEVWVWNRTPQRALALAEE 158 (263)
T ss_dssp CEEEECC-SHHHHHHHHHHHHTT----CCEEEECSSHHHHHHHHHH
T ss_pred eEEEECC-cHHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHH
Confidence 4778886 789999999999999 7899999998877766443
|
| >3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
Probab=94.94 E-value=0.056 Score=44.35 Aligned_cols=42 Identities=29% Similarity=0.221 Sum_probs=35.9
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHH
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA 47 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~ 47 (248)
|+++.|.| .|.+|..+++.|++.| +.|++.+|++++.+.+.+
T Consensus 1 M~~I~iiG-~G~mG~~~a~~l~~~G----~~V~~~dr~~~~~~~~~~ 42 (287)
T 3pdu_A 1 MTTYGFLG-LGIMGGPMAANLVRAG----FDVTVWNRNPAKCAPLVA 42 (287)
T ss_dssp CCCEEEEC-CSTTHHHHHHHHHHHT----CCEEEECSSGGGGHHHHH
T ss_pred CCeEEEEc-cCHHHHHHHHHHHHCC----CeEEEEcCCHHHHHHHHH
Confidence 66677776 7999999999999999 899999999988777643
|
| >4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=94.94 E-value=0.13 Score=44.46 Aligned_cols=41 Identities=24% Similarity=0.239 Sum_probs=35.4
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA 47 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~ 47 (248)
.+++|.|+ |.+|..+++.+...| ++|++++++.++++.+.+
T Consensus 191 ~kV~ViG~-G~iG~~aa~~a~~lG----a~V~v~D~~~~~l~~~~~ 231 (405)
T 4dio_A 191 AKIFVMGA-GVAGLQAIATARRLG----AVVSATDVRPAAKEQVAS 231 (405)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTT----CEEEEECSSTTHHHHHHH
T ss_pred CEEEEECC-cHHHHHHHHHHHHCC----CEEEEEcCCHHHHHHHHH
Confidence 46888888 799999999999999 899999999988766644
|
| >2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6 | Back alignment and structure |
|---|
Probab=94.90 E-value=0.088 Score=43.54 Aligned_cols=37 Identities=24% Similarity=0.168 Sum_probs=32.8
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDK 41 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~ 41 (248)
|+++.|.||.|.+|.++++.|.+.| ..|++++|+.+.
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G----~~V~~~~~~~~~ 57 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASG----YPISILDREDWA 57 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTT----CCEEEECTTCGG
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCC----CeEEEEECCccc
Confidence 3578899999999999999999999 899999998753
|
| >2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A* | Back alignment and structure |
|---|
Probab=94.89 E-value=0.031 Score=43.98 Aligned_cols=39 Identities=23% Similarity=0.374 Sum_probs=33.1
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL 45 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~ 45 (248)
+++.|.| +|.+|.++++.|++.| .+|++.+|+.++.+.+
T Consensus 29 ~~I~iiG-~G~~G~~la~~l~~~g----~~V~~~~r~~~~~~~~ 67 (215)
T 2vns_A 29 PKVGILG-SGDFARSLATRLVGSG----FKVVVGSRNPKRTARL 67 (215)
T ss_dssp CCEEEEC-CSHHHHHHHHHHHHTT----CCEEEEESSHHHHHHH
T ss_pred CEEEEEc-cCHHHHHHHHHHHHCC----CEEEEEeCCHHHHHHH
Confidence 4577888 8999999999999999 8999999998765543
|
| >2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A* | Back alignment and structure |
|---|
Probab=94.84 E-value=0.086 Score=43.03 Aligned_cols=41 Identities=20% Similarity=0.189 Sum_probs=33.3
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHH
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA 47 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~ 47 (248)
|+++.|.| .|.+|..+++.|++ | +.|++.+|++++.+.+.+
T Consensus 1 M~~i~iiG-~G~~G~~~a~~l~~-g----~~V~~~~~~~~~~~~~~~ 41 (289)
T 2cvz_A 1 MEKVAFIG-LGAMGYPMAGHLAR-R----FPTLVWNRTFEKALRHQE 41 (289)
T ss_dssp -CCEEEEC-CSTTHHHHHHHHHT-T----SCEEEECSSTHHHHHHHH
T ss_pred CCeEEEEc-ccHHHHHHHHHHhC-C----CeEEEEeCCHHHHHHHHH
Confidence 55677776 59999999999999 9 889999999888776643
|
| >3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=94.81 E-value=0.12 Score=42.74 Aligned_cols=82 Identities=11% Similarity=0.084 Sum_probs=52.3
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHH--------hhcCCceeEEeeccCCchhhhhHHH
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALA--------QQHSNLHVIELDVTDFSKQQDVLFK 74 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~--------~~~~~~~~~~~D~~~~~~~v~~~~~ 74 (248)
++.|.| .|.+|..+++.|++.| +.|++.+|++++.+.+.+.. +.-. ..++..-+.+... ++.+++
T Consensus 17 ~I~vIG-~G~mG~~~A~~l~~~G----~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~-aDvvi~~vp~~~~-~~~v~~ 89 (296)
T 3qha_A 17 KLGYIG-LGNMGAPMATRMTEWP----GGVTVYDIRIEAMTPLAEAGATLADSVADVAA-ADLIHITVLDDAQ-VREVVG 89 (296)
T ss_dssp CEEEEC-CSTTHHHHHHHHTTST----TCEEEECSSTTTSHHHHHTTCEECSSHHHHTT-SSEEEECCSSHHH-HHHHHH
T ss_pred eEEEEC-cCHHHHHHHHHHHHCC----CeEEEEeCCHHHHHHHHHCCCEEcCCHHHHHh-CCEEEEECCChHH-HHHHHH
Confidence 456665 6899999999999999 89999999998877664321 0011 3344444444444 666666
Q ss_pred HhhhhhcCCCccEEEeccc
Q psy11190 75 DISDVVKDQGLNVLVNNAG 93 (248)
Q Consensus 75 ~i~~~~~~~~iD~lv~~ag 93 (248)
.+.+.... =.++|+...
T Consensus 90 ~l~~~l~~--g~ivv~~st 106 (296)
T 3qha_A 90 ELAGHAKP--GTVIAIHST 106 (296)
T ss_dssp HHHTTCCT--TCEEEECSC
T ss_pred HHHHhcCC--CCEEEEeCC
Confidence 66654431 245555544
|
| >3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A* | Back alignment and structure |
|---|
Probab=94.81 E-value=0.064 Score=46.66 Aligned_cols=55 Identities=18% Similarity=0.226 Sum_probs=41.6
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCch
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSK 67 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 67 (248)
.++|.|. |-+|+.+++.|.++| ..|++++++++..+.+.+ ..+.++.+|.++.+.
T Consensus 6 ~viIiG~-Gr~G~~va~~L~~~g----~~vvvId~d~~~v~~~~~-----~g~~vi~GDat~~~~ 60 (413)
T 3l9w_A 6 RVIIAGF-GRFGQITGRLLLSSG----VKMVVLDHDPDHIETLRK-----FGMKVFYGDATRMDL 60 (413)
T ss_dssp SEEEECC-SHHHHHHHHHHHHTT----CCEEEEECCHHHHHHHHH-----TTCCCEESCTTCHHH
T ss_pred eEEEECC-CHHHHHHHHHHHHCC----CCEEEEECCHHHHHHHHh-----CCCeEEEcCCCCHHH
Confidence 4788886 789999999999999 899999999987666532 134455666666443
|
| >1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A | Back alignment and structure |
|---|
Probab=94.80 E-value=0.32 Score=39.17 Aligned_cols=34 Identities=26% Similarity=0.394 Sum_probs=28.0
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNK 39 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~ 39 (248)
++++|.|+ ||+|.++++.|+..|. .++.+++++.
T Consensus 29 ~~VlvvG~-GglG~~va~~La~~Gv---g~i~lvD~d~ 62 (251)
T 1zud_1 29 SQVLIIGL-GGLGTPAALYLAGAGV---GTLVLADDDD 62 (251)
T ss_dssp CEEEEECC-STTHHHHHHHHHHTTC---SEEEEECCCB
T ss_pred CcEEEEcc-CHHHHHHHHHHHHcCC---CeEEEEeCCC
Confidence 46888887 7799999999999995 5888886653
|
| >1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A* | Back alignment and structure |
|---|
Probab=94.62 E-value=0.095 Score=45.07 Aligned_cols=41 Identities=24% Similarity=0.259 Sum_probs=35.2
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA 47 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~ 47 (248)
++++|+|+ |++|+.+++.+...| ++|++++++.++++.+.+
T Consensus 173 ~~V~ViGa-G~iG~~aa~~a~~~G----a~V~~~d~~~~~~~~~~~ 213 (384)
T 1l7d_A 173 ARVLVFGV-GVAGLQAIATAKRLG----AVVMATDVRAATKEQVES 213 (384)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTT----CEEEEECSCSTTHHHHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHH
Confidence 57899996 899999999999999 789999999887766543
|
| >3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A* | Back alignment and structure |
|---|
Probab=94.51 E-value=0.23 Score=41.87 Aligned_cols=34 Identities=21% Similarity=0.295 Sum_probs=27.7
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNK 39 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~ 39 (248)
++++|.|+ ||+|.++++.|+..|. .++.+++++.
T Consensus 35 ~~VlIvGa-GGlGs~va~~La~aGV---g~ItlvD~D~ 68 (340)
T 3rui_A 35 TKVLLLGA-GTLGCYVSRALIAWGV---RKITFVDNGT 68 (340)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTC---CEEEEECCCB
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCC---CEEEEecCCE
Confidence 35777765 7999999999999996 6888887754
|
| >1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A* | Back alignment and structure |
|---|
Probab=94.46 E-value=0.096 Score=42.89 Aligned_cols=81 Identities=16% Similarity=0.216 Sum_probs=48.1
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEE-EeecCchhH--HH-----------------HHHHHhhcCCceeEEeec
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIF-ATCRNKDKA--VE-----------------LLALAQQHSNLHVIELDV 62 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~-~~~r~~~~~--~~-----------------~~~~~~~~~~~~~~~~D~ 62 (248)
++.|+|++|.+|+.+++.+.+.. +..|+ +++++.+.. .. +.+... .+. +..|+
T Consensus 7 kV~V~Ga~G~mG~~~~~~~~~~~---~~elva~~d~~~~~~~g~d~~~~~g~~~~~v~~~~dl~~~l~---~~D-vVIDf 79 (273)
T 1dih_A 7 RVAIAGAGGRMGRQLIQAALALE---GVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKD---DFD-VFIDF 79 (273)
T ss_dssp EEEETTTTSHHHHHHHHHHHHST---TEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTT---SCS-EEEEC
T ss_pred EEEEECCCCHHHHHHHHHHHhCC---CCEEEEEEecCchhhhhhhHHHHcCCCcCCceecCCHHHHhc---CCC-EEEEc
Confidence 68999999999999999987543 16766 556554320 00 011110 222 33677
Q ss_pred cCCchhhhhHHHHhhhhhcCCCccEEEeccccC
Q psy11190 63 TDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIA 95 (248)
Q Consensus 63 ~~~~~~v~~~~~~i~~~~~~~~iD~lv~~ag~~ 95 (248)
+.++. ....+..+.+. ++++++-..|..
T Consensus 80 t~p~~-~~~~~~~a~~~----G~~vVigTtG~~ 107 (273)
T 1dih_A 80 TRPEG-TLNHLAFCRQH----GKGMVIGTTGFD 107 (273)
T ss_dssp SCHHH-HHHHHHHHHHT----TCEEEECCCCCC
T ss_pred CChHH-HHHHHHHHHhC----CCCEEEECCCCC
Confidence 77666 55555544442 477777777643
|
| >4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=94.41 E-value=0.29 Score=40.03 Aligned_cols=119 Identities=15% Similarity=0.198 Sum_probs=66.6
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEE-eecCchhH------------------HHHHHHHhhcCCceeEEeec
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFA-TCRNKDKA------------------VELLALAQQHSNLHVIELDV 62 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~-~~r~~~~~------------------~~~~~~~~~~~~~~~~~~D~ 62 (248)
.++.|.|++|.+|+.+++.+.+... ..++. ++|+.... ..+.++... .. +..|+
T Consensus 8 ikV~V~Ga~G~MG~~i~~~l~~~~~---~eLv~~~d~~~~~~~G~d~gel~g~~~gv~v~~dl~~ll~~---~D-VVIDf 80 (272)
T 4f3y_A 8 MKIAIAGASGRMGRMLIEAVLAAPD---ATLVGALDRTGSPQLGQDAGAFLGKQTGVALTDDIERVCAE---AD-YLIDF 80 (272)
T ss_dssp EEEEESSTTSHHHHHHHHHHHHCTT---EEEEEEBCCTTCTTTTSBTTTTTTCCCSCBCBCCHHHHHHH---CS-EEEEC
T ss_pred cEEEEECCCCHHHHHHHHHHHhCCC---CEEEEEEEecCcccccccHHHHhCCCCCceecCCHHHHhcC---CC-EEEEc
Confidence 4699999999999999999987652 66665 56653210 111222221 12 35788
Q ss_pred cCCchhhhhHHHHhhhhhcCCCccEEEeccccCCcc-ccCCCCChhhhhheeeecchhhHHHHHHHhHHHHh
Q psy11190 63 TDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKF-TRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKK 133 (248)
Q Consensus 63 ~~~~~~v~~~~~~i~~~~~~~~iD~lv~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 133 (248)
+.++. ....+..+.+. ++.+|+.+.|..... ..+.+.. +..--.+..|+---.+++..++....+
T Consensus 81 T~p~a-~~~~~~~al~~----G~~vVigTTG~s~~~~~~L~~aa-~~~~vv~a~N~s~Gv~l~~~~~~~aa~ 146 (272)
T 4f3y_A 81 TLPEG-TLVHLDAALRH----DVKLVIGTTGFSEPQKAQLRAAG-EKIALVFSANMSVGVNVTMKLLEFAAK 146 (272)
T ss_dssp SCHHH-HHHHHHHHHHH----TCEEEECCCCCCHHHHHHHHHHT-TTSEEEECSCCCHHHHHHHHHHHHHHH
T ss_pred CCHHH-HHHHHHHHHHc----CCCEEEECCCCCHHHHHHHHHHh-ccCCEEEECCCCHHHHHHHHHHHHHHH
Confidence 88777 55555555543 488999888864320 0011110 111225555555445555555554433
|
| >3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=94.39 E-value=0.093 Score=43.00 Aligned_cols=39 Identities=31% Similarity=0.276 Sum_probs=33.2
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHH
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELL 46 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~ 46 (248)
++.|.| .|.+|..+++.|++.| +.|++.+|++++.+.+.
T Consensus 3 ~i~iIG-~G~mG~~~a~~l~~~G----~~V~~~dr~~~~~~~~~ 41 (287)
T 3pef_A 3 KFGFIG-LGIMGSAMAKNLVKAG----CSVTIWNRSPEKAEELA 41 (287)
T ss_dssp EEEEEC-CSHHHHHHHHHHHHTT----CEEEEECSSGGGGHHHH
T ss_pred EEEEEe-ecHHHHHHHHHHHHCC----CeEEEEcCCHHHHHHHH
Confidence 455665 6899999999999999 99999999998877664
|
| >1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A* | Back alignment and structure |
|---|
Probab=94.38 E-value=0.073 Score=44.02 Aligned_cols=40 Identities=18% Similarity=0.299 Sum_probs=34.6
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL 45 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~ 45 (248)
|+++.|.|+ |.+|..+|..|++.| +.|++.+++++.++..
T Consensus 15 ~~~I~VIG~-G~mG~~iA~~la~~G----~~V~~~d~~~~~~~~~ 54 (302)
T 1f0y_A 15 VKHVTVIGG-GLMGAGIAQVAAATG----HTVVLVDQTEDILAKS 54 (302)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTT----CEEEEECSCHHHHHHH
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCC----CeEEEEECCHHHHHHH
Confidence 466788887 899999999999999 8999999998876654
|
| >1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A | Back alignment and structure |
|---|
Probab=94.35 E-value=0.079 Score=44.50 Aligned_cols=70 Identities=16% Similarity=0.188 Sum_probs=51.2
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhcC
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVKD 82 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~~ 82 (248)
.++|.|+ |.+|+.+++.|.++| . |++++++++..+ +.+ ..+.++.+|.++++. .+++ +-
T Consensus 117 ~viI~G~-G~~g~~l~~~L~~~g----~-v~vid~~~~~~~-~~~-----~~~~~i~gd~~~~~~-L~~a--------~i 175 (336)
T 1lnq_A 117 HVVICGW-SESTLECLRELRGSE----V-FVLAEDENVRKK-VLR-----SGANFVHGDPTRVSD-LEKA--------NV 175 (336)
T ss_dssp EEEEESC-CHHHHHHHTTGGGSC----E-EEEESCGGGHHH-HHH-----TTCEEEESCTTSHHH-HHHT--------CS
T ss_pred CEEEECC-cHHHHHHHHHHHhCC----c-EEEEeCChhhhh-HHh-----CCcEEEEeCCCCHHH-HHhc--------Ch
Confidence 5888886 899999999999999 8 999999988766 422 357788899988665 3321 11
Q ss_pred CCccEEEeccc
Q psy11190 83 QGLNVLVNNAG 93 (248)
Q Consensus 83 ~~iD~lv~~ag 93 (248)
.+.|.+|...+
T Consensus 176 ~~a~~vi~~~~ 186 (336)
T 1lnq_A 176 RGARAVIVDLE 186 (336)
T ss_dssp TTEEEEEECCS
T ss_pred hhccEEEEcCC
Confidence 13677776654
|
| >3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=94.33 E-value=0.14 Score=42.45 Aligned_cols=41 Identities=24% Similarity=0.184 Sum_probs=34.6
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHH
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELL 46 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~ 46 (248)
|+++.|.| .|.+|..+++.|++.| +.|++.+|++++.+.+.
T Consensus 21 m~~I~iIG-~G~mG~~~A~~l~~~G----~~V~~~dr~~~~~~~l~ 61 (310)
T 3doj_A 21 MMEVGFLG-LGIMGKAMSMNLLKNG----FKVTVWNRTLSKCDELV 61 (310)
T ss_dssp SCEEEEEC-CSHHHHHHHHHHHHTT----CEEEEECSSGGGGHHHH
T ss_pred CCEEEEEC-ccHHHHHHHHHHHHCC----CeEEEEeCCHHHHHHHH
Confidence 45566665 6899999999999999 89999999998877664
|
| >3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=94.32 E-value=0.079 Score=43.85 Aligned_cols=40 Identities=20% Similarity=0.281 Sum_probs=33.5
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHH
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA 47 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~ 47 (248)
++.|. |.|.+|..+++.|++.| +.|++.+|++++.+.+.+
T Consensus 9 ~I~iI-G~G~mG~~~a~~l~~~G----~~V~~~dr~~~~~~~~~~ 48 (303)
T 3g0o_A 9 HVGIV-GLGSMGMGAARSCLRAG----LSTWGADLNPQACANLLA 48 (303)
T ss_dssp EEEEE-CCSHHHHHHHHHHHHTT----CEEEEECSCHHHHHHHHH
T ss_pred eEEEE-CCCHHHHHHHHHHHHCC----CeEEEEECCHHHHHHHHH
Confidence 45555 57899999999999999 899999999988776643
|
| >2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=94.32 E-value=0.06 Score=44.44 Aligned_cols=41 Identities=15% Similarity=0.090 Sum_probs=34.3
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHH
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELL 46 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~ 46 (248)
|+++.|.|+ |.+|..++..|++.| +.|++++|+++..+.+.
T Consensus 3 ~m~i~iiG~-G~~G~~~a~~l~~~g----~~V~~~~r~~~~~~~~~ 43 (316)
T 2ew2_A 3 AMKIAIAGA-GAMGSRLGIMLHQGG----NDVTLIDQWPAHIEAIR 43 (316)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHHTT----CEEEEECSCHHHHHHHH
T ss_pred CCeEEEECc-CHHHHHHHHHHHhCC----CcEEEEECCHHHHHHHH
Confidence 346778885 999999999999999 89999999988776654
|
| >4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=94.30 E-value=0.038 Score=43.60 Aligned_cols=42 Identities=12% Similarity=0.185 Sum_probs=35.7
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEE-eecCchhHHHHHH
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFA-TCRNKDKAVELLA 47 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~-~~r~~~~~~~~~~ 47 (248)
|+++.|.| +|.+|.++++.|++.| ..|++ .+|++++++.+.+
T Consensus 23 mmkI~IIG-~G~mG~~la~~l~~~g----~~V~~v~~r~~~~~~~l~~ 65 (220)
T 4huj_A 23 MTTYAIIG-AGAIGSALAERFTAAQ----IPAIIANSRGPASLSSVTD 65 (220)
T ss_dssp SCCEEEEE-CHHHHHHHHHHHHHTT----CCEEEECTTCGGGGHHHHH
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCC----CEEEEEECCCHHHHHHHHH
Confidence 45678888 8999999999999999 88888 9999988877643
|
| >3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579} | Back alignment and structure |
|---|
Probab=94.26 E-value=0.099 Score=41.85 Aligned_cols=41 Identities=20% Similarity=0.245 Sum_probs=34.1
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCc----eEEEeecCchhHHHHHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPA----HIFATCRNKDKAVELLA 47 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~----~V~~~~r~~~~~~~~~~ 47 (248)
+++.|.| .|.+|.++++.|++.| . .|++.+|++++++.+.+
T Consensus 3 ~~i~iIG-~G~mG~~~a~~l~~~g----~~~~~~V~~~~r~~~~~~~~~~ 47 (247)
T 3gt0_A 3 KQIGFIG-CGNMGMAMIGGMINKN----IVSSNQIICSDLNTANLKNASE 47 (247)
T ss_dssp CCEEEEC-CSHHHHHHHHHHHHTT----SSCGGGEEEECSCHHHHHHHHH
T ss_pred CeEEEEC-ccHHHHHHHHHHHhCC----CCCCCeEEEEeCCHHHHHHHHH
Confidence 3566665 8899999999999999 6 99999999988776643
|
| >3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A | Back alignment and structure |
|---|
Probab=94.17 E-value=0.21 Score=42.44 Aligned_cols=34 Identities=24% Similarity=0.460 Sum_probs=28.9
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNK 39 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~ 39 (248)
++++|.|+ ||+|.++++.|+..|. .++.+++++.
T Consensus 119 ~~VlvvG~-GglGs~va~~La~aGv---g~i~lvD~D~ 152 (353)
T 3h5n_A 119 AKVVILGC-GGIGNHVSVILATSGI---GEIILIDNDQ 152 (353)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTC---SEEEEEECCB
T ss_pred CeEEEECC-CHHHHHHHHHHHhCCC---CeEEEECCCc
Confidence 46888876 8999999999999996 6888988864
|
| >3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A* | Back alignment and structure |
|---|
Probab=94.13 E-value=0.2 Score=41.51 Aligned_cols=69 Identities=19% Similarity=0.132 Sum_probs=49.4
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHh--------hcCCceeEEeeccCCchhhhhH
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQ--------QHSNLHVIELDVTDFSKQQDVL 72 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~--------~~~~~~~~~~D~~~~~~~v~~~ 72 (248)
||++-+.| .|-+|..+|+.|+++| +.|++.+|++++.+.+.+... .-....++..-+.+.+. ++.+
T Consensus 3 M~kIgfIG-lG~MG~~mA~~L~~~G----~~v~v~dr~~~~~~~l~~~Ga~~a~s~~e~~~~~dvv~~~l~~~~~-v~~V 76 (300)
T 3obb_A 3 MKQIAFIG-LGHMGAPMATNLLKAG----YLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQH-VEGL 76 (300)
T ss_dssp CCEEEEEC-CSTTHHHHHHHHHHTT----CEEEEECSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHH-HHHH
T ss_pred cCEEEEee-ehHHHHHHHHHHHhCC----CeEEEEcCCHHHHHHHHHcCCEEcCCHHHHHhcCCceeecCCchHH-HHHH
Confidence 66666655 6889999999999999 999999999988877644211 01134566666777666 6666
Q ss_pred HHH
Q psy11190 73 FKD 75 (248)
Q Consensus 73 ~~~ 75 (248)
+..
T Consensus 77 ~~~ 79 (300)
T 3obb_A 77 YLD 79 (300)
T ss_dssp HHS
T ss_pred Hhc
Confidence 544
|
| >4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=93.89 E-value=0.15 Score=42.56 Aligned_cols=39 Identities=23% Similarity=0.254 Sum_probs=32.8
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHH
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELL 46 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~ 46 (248)
++.|. |.|.+|..+++.|++.| +.|++.+|++++.+++.
T Consensus 33 ~I~iI-G~G~mG~~~a~~l~~~G----~~V~~~dr~~~~~~~l~ 71 (320)
T 4dll_A 33 KITFL-GTGSMGLPMARRLCEAG----YALQVWNRTPARAASLA 71 (320)
T ss_dssp EEEEE-CCTTTHHHHHHHHHHTT----CEEEEECSCHHHHHHHH
T ss_pred EEEEE-CccHHHHHHHHHHHhCC----CeEEEEcCCHHHHHHHH
Confidence 45566 55999999999999999 89999999988877653
|
| >2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6 | Back alignment and structure |
|---|
Probab=93.86 E-value=0.092 Score=42.80 Aligned_cols=40 Identities=25% Similarity=0.289 Sum_probs=34.6
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCc--eEEEeecCchhHHHH
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPA--HIFATCRNKDKAVEL 45 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~--~V~~~~r~~~~~~~~ 45 (248)
|+++.|.| .|.+|.++++.|.+.| . +|++.+|++++.+.+
T Consensus 1 m~~I~iIG-~G~mG~~~a~~l~~~g----~~~~V~~~d~~~~~~~~~ 42 (281)
T 2g5c_A 1 MQNVLIVG-VGFMGGSFAKSLRRSG----FKGKIYGYDINPESISKA 42 (281)
T ss_dssp CCEEEEES-CSHHHHHHHHHHHHTT----CCSEEEEECSCHHHHHHH
T ss_pred CcEEEEEe-cCHHHHHHHHHHHhcC----CCcEEEEEeCCHHHHHHH
Confidence 67788888 7999999999999998 6 899999998776654
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 248 | ||||
| d1yo6a1 | 250 | c.2.1.2 (A:1-250) Putative carbonyl reductase snif | 9e-51 | |
| d1snya_ | 248 | c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly | 4e-49 | |
| d1xg5a_ | 257 | c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41 | 1e-29 | |
| d1ydea1 | 250 | c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase | 6e-29 | |
| d1wmaa1 | 275 | c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox | 1e-27 | |
| d1spxa_ | 264 | c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato | 5e-27 | |
| d1yb1a_ | 244 | c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase | 2e-26 | |
| d1sbya1 | 254 | c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase | 3e-26 | |
| d2d1ya1 | 248 | c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T | 4e-26 | |
| d2ew8a1 | 247 | c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas | 9e-25 | |
| d1hxha_ | 253 | c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge | 1e-24 | |
| d1hdca_ | 254 | c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr | 6e-24 | |
| d1pr9a_ | 244 | c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie | 6e-24 | |
| d1cyda_ | 242 | c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul | 7e-24 | |
| d2ae2a_ | 259 | c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu | 9e-24 | |
| d1xu9a_ | 269 | c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase | 8e-23 | |
| d1zk4a1 | 251 | c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase | 2e-22 | |
| d1bdba_ | 276 | c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy | 3e-22 | |
| d1gz6a_ | 302 | c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do | 3e-22 | |
| d2gdza1 | 254 | c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog | 4e-22 | |
| d2bgka1 | 268 | c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de | 6e-22 | |
| d1xkqa_ | 272 | c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh | 8e-22 | |
| d1xhla_ | 274 | c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh | 9e-22 | |
| d1xq1a_ | 259 | c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara | 2e-21 | |
| d1jtva_ | 285 | c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi | 3e-20 | |
| d2c07a1 | 251 | c.2.1.2 (A:54-304) beta-keto acyl carrier protein | 4e-20 | |
| d1h5qa_ | 260 | c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga | 4e-20 | |
| d1vl8a_ | 251 | c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga | 6e-20 | |
| d2bd0a1 | 240 | c.2.1.2 (A:2-241) Bacterial sepiapterin reductase | 1e-19 | |
| d1zmta1 | 252 | c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag | 2e-19 | |
| d1ja9a_ | 259 | c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc | 2e-19 | |
| d2o23a1 | 248 | c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr | 2e-18 | |
| d1yxma1 | 297 | c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re | 5e-18 | |
| d1ae1a_ | 258 | c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu | 7e-18 | |
| d1ulsa_ | 242 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 1e-17 | |
| d2ag5a1 | 245 | c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami | 1e-17 | |
| d1uaya_ | 241 | c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena | 4e-17 | |
| d1nffa_ | 244 | c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob | 5e-17 | |
| d1fmca_ | 255 | c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase | 5e-17 | |
| d1q7ba_ | 243 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 6e-17 | |
| d1dhra_ | 236 | c.2.1.2 (A:) Dihydropteridin reductase (pteridine | 1e-16 | |
| d2a4ka1 | 241 | c.2.1.2 (A:2-242) beta-keto acyl carrier protein r | 1e-16 | |
| d1oaaa_ | 259 | c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus | 2e-16 | |
| d2rhca1 | 257 | c.2.1.2 (A:5-261) beta-keto acyl carrier protein r | 4e-16 | |
| d1iy8a_ | 258 | c.2.1.2 (A:) Levodione reductase {Corynebacterium | 5e-16 | |
| d1geea_ | 261 | c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat | 7e-16 | |
| d1mxha_ | 266 | c.2.1.2 (A:) Dihydropteridin reductase (pteridine | 7e-16 | |
| d1zema1 | 260 | c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba | 8e-16 | |
| d1w6ua_ | 294 | c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr | 4e-15 | |
| d1ooea_ | 235 | c.2.1.2 (A:) Dihydropteridin reductase (pteridine | 6e-15 | |
| d1g0oa_ | 272 | c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase | 7e-15 | |
| d1edoa_ | 244 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 1e-14 | |
| d1x1ta1 | 260 | c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge | 2e-14 | |
| d1o5ia_ | 234 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 3e-13 | |
| d1gega_ | 255 | c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl | 6e-13 | |
| d1k2wa_ | 256 | c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s | 1e-12 | |
| d1uzma1 | 237 | c.2.1.2 (A:9-245) beta-keto acyl carrier protein r | 4e-12 | |
| d1ulua_ | 256 | c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph | 6e-12 | |
| d1fjha_ | 257 | c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase | 2e-11 | |
| d1qsga_ | 258 | c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli | 8e-11 | |
| d1luaa1 | 191 | c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter | 8e-10 | |
| d2fr1a1 | 259 | c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI | 5e-05 | |
| d1kewa_ | 361 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 5e-04 |
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Score = 164 bits (415), Expect = 9e-51
Identities = 97/250 (38%), Positives = 142/250 (56%), Gaps = 9/250 (3%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
S+++TG NRG+GLG+++ LV N HI AT R+ +KA EL ++ S +HV+ L
Sbjct: 4 GSVVVTGANRGIGLGLVQQLVKDKNI--RHIIATARDVEKATELKSIK--DSRVHVLPLT 59
Query: 62 VTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPL 121
VT K D + ++V GL++L+NNAG+ + + + VN T+ +
Sbjct: 60 VTC-DKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVV 118
Query: 122 MLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGG----FHPYRCSKAA 177
+LT+ +LPLLK A+ S L SRAA++ +SS +GSI DNT G YR SKAA
Sbjct: 119 LLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAA 178
Query: 178 LNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQSLGEAHNG 237
+N R+L++DLK D ++ PGWV+T++GG NA L V +TA +I L +HNG
Sbjct: 179 INMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKNAALTVEQSTAELISSFNKLDNSHNG 238
Query: 238 GFFEYTGKAI 247
FF K
Sbjct: 239 RFFMRNLKPY 248
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Score = 159 bits (403), Expect = 4e-49
Identities = 133/247 (53%), Positives = 176/247 (71%), Gaps = 2/247 (0%)
Query: 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIEL 60
M SILITGCNRGLGLG++K L+ L P H+F TCRN+++A EL LA+ HSN+H++E+
Sbjct: 2 MNSILITGCNRGLGLGLVKALLNLPQ-PPQHLFTTCRNREQAKELEDLAKNHSNIHILEI 60
Query: 61 DVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAP 120
D+ +F + DI V KDQGLNVL NNAGIA K R+ ++ +++ D N P
Sbjct: 61 DLRNFDAYDKL-VADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVP 119
Query: 121 LMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNA 180
+ML K LPLLKKA++AN + P+G RAAI+N+SSI+GSI+ NT GG + YR SK+ALNA
Sbjct: 120 IMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNA 179
Query: 181 ATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQSLGEAHNGGFF 240
AT+SLS+DL +I+ ++HPGWVKTDMGGS+APL+V +T I+Q I LGE NGGF
Sbjct: 180 ATKSLSVDLYPQRIMCVSLHPGWVKTDMGGSSAPLDVPTSTGQIVQTISKLGEKQNGGFV 239
Query: 241 EYTGKAI 247
Y G +
Sbjct: 240 NYDGTPL 246
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Score = 109 bits (274), Expect = 1e-29
Identities = 52/228 (22%), Positives = 87/228 (38%), Gaps = 23/228 (10%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQ---HSNLHVI 58
+ L+TG + G+G + + LV G + R EL A + L
Sbjct: 11 RLALVTGASGGIGAAVARALVQQG----LKVVGCARTVGNIEELAAECKSAGYPGTLIPY 66
Query: 59 ELDVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVT 118
D+++ + +F I + G+++ +NNAG+ A+ L D F VNV
Sbjct: 67 RCDLSN-EEDILSMFSAIRS--QHSGVDICINNAGL-ARPDTLLSGSTSGWKDMFNVNVL 122
Query: 119 APLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAAL 178
A + T+ +K+ I+N++S+ G H Y +K A+
Sbjct: 123 ALSICTREAYQSMKER---------NVDDGHIININSMSGHR-VLPLSVTHFYSATKYAV 172
Query: 179 NAATRSLSIDLK--GDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGI 224
A T L +L+ I AT + PG V+T + A A
Sbjct: 173 TALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATY 220
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Score = 107 bits (268), Expect = 6e-29
Identities = 50/207 (24%), Positives = 88/207 (42%), Gaps = 25/207 (12%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K +++TG RG+G G+++ V G A + +++ AL Q+ I D
Sbjct: 7 KVVVVTGGGRGIGAGIVRAFVNSG----ARVVICDKDESG---GRALEQELPGAVFILCD 59
Query: 62 VTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPL 121
VT + L + + L+ +VNNAG R + +N+
Sbjct: 60 VTQEDDVKT-LVSETIR--RFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTY 116
Query: 122 MLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNAA 181
LTK LP L+K S+ ++N+SS++G+ Q PY +K A+ A
Sbjct: 117 TLTKLALPYLRK------------SQGNVINISSLVGA---IGQAQAVPYVATKGAVTAM 161
Query: 182 TRSLSIDLKGDKIIATAMHPGWVKTDM 208
T++L++D + + PG + T +
Sbjct: 162 TKALALDESPYGVRVNCISPGNIWTPL 188
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Score = 104 bits (260), Expect = 1e-27
Identities = 64/268 (23%), Positives = 100/268 (37%), Gaps = 39/268 (14%)
Query: 5 LITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIELDVT 63
L+TG N+G+GL +++ L L + + T R+ + + L + + +LD+
Sbjct: 7 LVTGGNKGIGLAIVRDLCRLFS---GDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDID 63
Query: 64 DFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLML 123
D + L + GL+VLVNNAGIA Q N +
Sbjct: 64 DLQSIRA-LRDFLRKEYG--GLDVLVNNAGIA-FKVADPTPFHIQAEVTMKTNFFGTRDV 119
Query: 124 TKTMLPLLKK-----------------ASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQG 166
+LPL+K + S + +M ++T+
Sbjct: 120 CTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKK 179
Query: 167 GFHP--------YRCSKAALNAATRSLSIDL----KGDKIIATAMHPGWVKTDMGGSNAP 214
G H Y +K + +R + L KGDKI+ A PGWV+TDM G A
Sbjct: 180 GVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPKAT 239
Query: 215 L--EVGAATAGIIQFIQSLGEAHNGGFF 240
E GA T + + E +G F
Sbjct: 240 KSPEEGAETPVYLALLPPDAEGPHGQFV 267
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 102 bits (256), Expect = 5e-27
Identities = 56/216 (25%), Positives = 95/216 (43%), Gaps = 30/216 (13%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDK----AVELLALAQQHSNLHV 57
K +ITG + G+G + G A + T R+ ++ ++LA N++
Sbjct: 6 KVAIITGSSNGIGRATAVLFAREG----AKVTITGRHAERLEETRQQILAAGVSEQNVNS 61
Query: 58 IELDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLL---KPEQMTDHF 113
+ DVT + Q ++ +S + G L++LVNNAG A ++ E
Sbjct: 62 VVADVTTDAGQDEI----LSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATL 117
Query: 114 LVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRC 173
+N+ + + LTK +P L ++ IVN+SSI + + F Y
Sbjct: 118 NLNLRSVIALTKKAVPHLSS------------TKGEIVNISSIASGL--HATPDFPYYSI 163
Query: 174 SKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMG 209
+KAA++ TR+ +IDL I ++ PG V T G
Sbjct: 164 AKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFG 199
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Score = 100 bits (251), Expect = 2e-26
Identities = 46/211 (21%), Positives = 78/211 (36%), Gaps = 26/211 (12%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIEL 60
+ +LITG G+G L + + NK E A + +H +
Sbjct: 8 EIVLITGAGHGIGRLTAYEFAKLK----SKLVLWDINKHGLEETAAKCKGLGAKVHTFVV 63
Query: 61 DVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAP 120
D ++ K + + +++LVNNA + L + Q+ F VNV A
Sbjct: 64 DCSNREDIYSSAKKVKA---EIGDVSILVNNA-GVVYTSDLFATQDPQIEKTFEVNVLAH 119
Query: 121 LMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNA 180
TK LP + K ++ IV V+S G + + Y SK A
Sbjct: 120 FWTTKAFLPAMTK-----------NNHGHIVTVASAAGHV---SVPFLLAYCSSKFAAVG 165
Query: 181 ATRSLSIDL---KGDKIIATAMHPGWVKTDM 208
++L+ +L + + T + P +V T
Sbjct: 166 FHKTLTDELAALQITGVKTTCLCPNFVNTGF 196
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Score = 100 bits (250), Expect = 3e-26
Identities = 45/209 (21%), Positives = 75/209 (35%), Gaps = 28/209 (13%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHS--NLHVIE 59
K+++ G+GL + LV F + L L + N+
Sbjct: 6 KNVIFVAALGGIGLDTSRELVKRN----LKNFVILDRVENPTALAELKAINPKVNITFHT 61
Query: 60 LDVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTA 119
DVT + L K I D + + +++L+N AGI Q+ +N T
Sbjct: 62 YDVTVPVAESKKLLKKIFD--QLKTVDILINGAGIL---------DDHQIERTIAINFTG 110
Query: 120 PLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALN 179
+ T +L K I N+ S+ G N Y SKAA+
Sbjct: 111 LVNTTTAILDFWDKRKGGP--------GGIIANICSVTG---FNAIHQVPVYSASKAAVV 159
Query: 180 AATRSLSIDLKGDKIIATAMHPGWVKTDM 208
+ T SL+ + A +++PG +T +
Sbjct: 160 SFTNSLAKLAPITGVTAYSINPGITRTPL 188
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Score = 99 bits (249), Expect = 4e-26
Identities = 50/208 (24%), Positives = 84/208 (40%), Gaps = 29/208 (13%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K +L+TG RG+G + + G A + + A+ ++D
Sbjct: 6 KGVLVTGGARGIGRAIAQAFAREG----ALVALCDLRPEGKEVAEAI-----GGAFFQVD 56
Query: 62 VTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAP 120
+ D ++ + + G ++VLVNNA IAA ++ + VN+TAP
Sbjct: 57 LEDERERVRF----VEEAAYALGRVDVLVNNAAIAA-PGSALTVRLPEWRRVLEVNLTAP 111
Query: 121 LMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNA 180
+ L+ ++K IVNV+S+ G + Y SK L
Sbjct: 112 MHLSALAAREMRKVGGGA-----------IVNVASVQGLF---AEQENAAYNASKGGLVN 157
Query: 181 ATRSLSIDLKGDKIIATAMHPGWVKTDM 208
TRSL++DL +I A+ PG + T+
Sbjct: 158 LTRSLALDLAPLRIRVNAVAPGAIATEA 185
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Score = 96.5 bits (240), Expect = 9e-25
Identities = 53/234 (22%), Positives = 89/234 (38%), Gaps = 25/234 (10%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K +ITG G+G + + G A I E A+ + ++ D
Sbjct: 6 KLAVITGGANGIGRAIAERFAVEG----ADIAIADLVPAPEAEA-AIRNLGRRVLTVKCD 60
Query: 62 VTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAP 120
V+ + V+ G ++LVNNAGI L EQ F +NV +
Sbjct: 61 VSQPGDVEAF----GKQVISTFGRCDILVNNAGIY-PLIPFDELTFEQWKKTFEINVDSG 115
Query: 121 LMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNA 180
++ K +P +K+ + I+N++S + + Y +KAA
Sbjct: 116 FLMAKAFVPGMKR-----------NGWGRIINLTSTTYWL---KIEAYTHYISTKAANIG 161
Query: 181 ATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQSLGEA 234
TR+L+ DL D I A+ P V+T ++A + ++Q I L
Sbjct: 162 FTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVP 215
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Score = 96.2 bits (239), Expect = 1e-24
Identities = 54/236 (22%), Positives = 100/236 (42%), Gaps = 29/236 (12%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K L+TG G+GL ++K+L+G G A + + N+ +L A + + D
Sbjct: 7 KVALVTGGASGVGLEVVKLLLGEG----AKVAFSDINEAAGQQLAA--ELGERSMFVRHD 60
Query: 62 VTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAP 120
V+ + V ++ V + G LNVLVNNAGI + + E + +N +
Sbjct: 61 VSSEADWTLV----MAAVQRRLGTLNVLVNNAGIL-LPGDMETGRLEDFSRLLKINTESV 115
Query: 121 LMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNA 180
+ + + +K+ +I+N++S+ + + Y SKAA++A
Sbjct: 116 FIGCQQGIAAMKETG------------GSIINMASVSSWL---PIEQYAGYSASKAAVSA 160
Query: 181 ATRSLSIDL--KGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQSLGEA 234
TR+ ++ +G I ++HP + T M ++ P V + G A
Sbjct: 161 LTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRA 216
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Score = 94.3 bits (234), Expect = 6e-24
Identities = 50/224 (22%), Positives = 86/224 (38%), Gaps = 26/224 (11%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K+++ITG RGLG + V G A + ++ + LD
Sbjct: 6 KTVIITGGARGLGAEAARQAVAAG----ARVVLADVLDEEGAATAR--ELGDAARYQHLD 59
Query: 62 VTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAP 120
VT Q V ++ ++ G ++ LVNNAGI+ L E+ +N+T
Sbjct: 60 VTIEEDWQRV----VAYAREEFGSVDGLVNNAGIS-TGMFLETESVERFRKVVEINLTGV 114
Query: 121 LMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNA 180
+ KT++P +K + +IVN+SS G + Y SK +
Sbjct: 115 FIGMKTVIPAMKD-----------AGGGSIVNISSAAGLMGLALTS---SYGASKWGVRG 160
Query: 181 ATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGI 224
++ +++L D+I ++HPG T M +
Sbjct: 161 LSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEGNYPNT 204
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 94.3 bits (234), Expect = 6e-24
Identities = 48/209 (22%), Positives = 87/209 (41%), Gaps = 30/209 (14%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
+ +L+TG +G+G G ++ L G A + A R + L +L ++ + + +D
Sbjct: 8 RRVLVTGAGKGIGRGTVQALHATG----ARVVAVSRTQAD---LDSLVRECPGIEPVCVD 60
Query: 62 VTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAP 120
+ D+ + G +++LVNNA +A + E F VN+ A
Sbjct: 61 LGDWE--------ATERALGSVGPVDLLVNNAAVA-LLQPFLEVTKEAFDRSFEVNLRAV 111
Query: 121 LMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNA 180
+ +++ + L + IVNVSS Y +K AL+
Sbjct: 112 IQVSQIVARGLIARGVPGA----------IVNVSSQCSQR---AVTNHSVYCSTKGALDM 158
Query: 181 ATRSLSIDLKGDKIIATAMHPGWVKTDMG 209
T+ ++++L KI A++P V T MG
Sbjct: 159 LTKVMALELGPHKIRVNAVNPTVVMTSMG 187
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 93.9 bits (233), Expect = 7e-24
Identities = 46/209 (22%), Positives = 89/209 (42%), Gaps = 30/209 (14%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
L+TG +G+G +K L G A + A R +L++LA++ + + +D
Sbjct: 6 LRALVTGAGKGIGRDTVKALHASG----AKVVAVTRTNS---DLVSLAKECPGIEPVCVD 58
Query: 62 VTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAP 120
+ D+ + G +++LVNNA + + E F VN+ +
Sbjct: 59 LGDWD--------ATEKALGGIGPVDLLVNNAALV-IMQPFLEVTKEAFDRSFSVNLRSV 109
Query: 121 LMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNA 180
+++ + + +IVNVSS++ + T Y +K A+
Sbjct: 110 FQVSQMVARDMINRGV----------PGSIVNVSSMVAHV---TFPNLITYSSTKGAMTM 156
Query: 181 ATRSLSIDLKGDKIIATAMHPGWVKTDMG 209
T++++++L KI +++P V TDMG
Sbjct: 157 LTKAMAMELGPHKIRVNSVNPTVVLTDMG 185
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Score = 93.9 bits (233), Expect = 9e-24
Identities = 49/208 (23%), Positives = 90/208 (43%), Gaps = 22/208 (10%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIEL 60
+ L+TG +RG+G G+++ L LG A ++ RN+ + + L + +
Sbjct: 9 CTALVTGGSRGIGYGIVEELASLG----ASVYTCSRNQKELNDCLTQWRSKGFKVEASVC 64
Query: 61 DVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAP 120
D++ S++Q+++ + LN+LVNNAGI + E + +N A
Sbjct: 65 DLSSRSERQELMNTVANHF--HGKLNILVNNAGIV-IYKEAKDYTVEDYSLIMSINFEAA 121
Query: 121 LMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNA 180
L+ P LK + R +V +SS+ G++ Y +K A++
Sbjct: 122 YHLSVLAHPFLKASE-----------RGNVVFISSVSGAL---AVPYEAVYGATKGAMDQ 167
Query: 181 ATRSLSIDLKGDKIIATAMHPGWVKTDM 208
TR L+ + D I + PG + T +
Sbjct: 168 LTRCLAFEWAKDNIRVNGVGPGVIATSL 195
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 91.7 bits (227), Expect = 8e-23
Identities = 45/211 (21%), Positives = 83/211 (39%), Gaps = 27/211 (12%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA--LAQQHSNLHVIE 59
K +++TG ++G+G M L +G AH+ T R+K+ ++++ L ++ H I
Sbjct: 15 KKVIVTGASKGIGREMAYHLAKMG----AHVVVTARSKETLQKVVSHCLELGAASAHYIA 70
Query: 60 LDVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTA 119
+ D + + ++ K G ++ I L + VN +
Sbjct: 71 GTMEDMTFAEQF----VAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLS 126
Query: 120 PLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALN 179
++LT LP+LK+ S +IV VSS+ G + Y SK AL+
Sbjct: 127 YVVLTVAALPMLKQ------------SNGSIVVVSSLAGKV---AYPMVAAYSASKFALD 171
Query: 180 AATRSLSIDL--KGDKIIATAMHPGWVKTDM 208
S+ + + T G + T+
Sbjct: 172 GFFSSIRKEYSVSRVNVSITLCVLGLIDTET 202
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Score = 90.4 bits (224), Expect = 2e-22
Identities = 51/210 (24%), Positives = 83/210 (39%), Gaps = 25/210 (11%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K +ITG G+GL + V G A + T R+ D + + + D
Sbjct: 7 KVAIITGGTLGIGLAIATKFVEEG----AKVMITGRHSDVGEKAAKSVGTPDQIQFFQHD 62
Query: 62 VTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAP 120
+D +D K K G ++ LVNNAGI A + + VN+
Sbjct: 63 SSD----EDGWTKLFDATEKAFGPVSTLVNNAGI-AVNKSVEETTTAEWRKLLAVNLDGV 117
Query: 121 LMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNA 180
T+ + +K A+I+N+SSI G + Y SK A+
Sbjct: 118 FFGTRLGIQRMKNK----------GLGASIINMSSIEGFV---GDPSLGAYNASKGAVRI 164
Query: 181 ATRSLSID--LKGDKIIATAMHPGWVKTDM 208
++S ++D LK + +HPG++KT +
Sbjct: 165 MSKSAALDCALKDYDVRVNTVHPGYIKTPL 194
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Score = 90.5 bits (224), Expect = 3e-22
Identities = 50/214 (23%), Positives = 79/214 (36%), Gaps = 31/214 (14%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
+++LITG GLG ++ V G A + ++ ++ EL N+ I D
Sbjct: 6 EAVLITGGASGLGRALVDRFVAEG----AKVAVLDKSAERLAEL--ETDHGDNVLGIVGD 59
Query: 62 VTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKP----EQMTDHFLVN 116
V Q+ S V G ++ L+ NAGI T L L + F +N
Sbjct: 60 VRSLEDQKQA----ASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHIN 115
Query: 117 VTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKA 176
V + K LP L SR ++ S G GG Y +K
Sbjct: 116 VKGYIHAVKACLPALVA------------SRGNVIFTISNAGFY---PNGGGPLYTAAKH 160
Query: 177 ALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGG 210
A+ R L+ +L + + G + +D+ G
Sbjct: 161 AIVGLVRELAFEL-APYVRVNGVGSGGINSDLRG 193
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 90.8 bits (225), Expect = 3e-22
Identities = 36/213 (16%), Positives = 65/213 (30%), Gaps = 27/213 (12%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAV------ELLALAQQHSNL 55
+ +L+TG GLG G A + D + ++
Sbjct: 8 RVVLVTGAGGGLGRAYALAFAERG----ALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR 63
Query: 56 HVIELDVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLV 115
+ D + + L K D ++V+VNNAGI + + E V
Sbjct: 64 GGKAVANYDSVEAGEKLVKTALD--TFGRIDVVVNNAGIL-RDRSFSRISDEDWDIIQRV 120
Query: 116 NVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSK 175
++ +T+ +KK + I+ +S G G Y +K
Sbjct: 121 HLRGSFQVTRAAWDHMKKQN-----------YGRIIMTASASGIY---GNFGQANYSAAK 166
Query: 176 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
L +L I+ + + I + P
Sbjct: 167 LGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMT 199
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Score = 89.7 bits (222), Expect = 4e-22
Identities = 51/236 (21%), Positives = 87/236 (36%), Gaps = 34/236 (14%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQ---HSNLHVI 58
K L+TG +G+G + L+ G A + N + V+ A + I
Sbjct: 4 KVALVTGAAQGIGRAFAEALLLKG----AKVALVDWNLEAGVQCKAALHEQFEPQKTLFI 59
Query: 59 ELDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNV 117
+ DV D + +D VV G L++LVNNAG+ + +N+
Sbjct: 60 QCDVADQQQLRDT----FRKVVDHFGRLDILVNNAGVN---------NEKNWEKTLQINL 106
Query: 118 TAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAA 177
+ + T L + K + I+N+SS+ G + Y SK
Sbjct: 107 VSVISGTYLGLDYMSKQNGGEGGI--------IINMSSLAGLM---PVAQQPVYCASKHG 155
Query: 178 LNAATR--SLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQSL 231
+ TR +L+ +L + A+ PG+V T + S E I+ +
Sbjct: 156 IVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDM 211
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Score = 89.4 bits (221), Expect = 6e-22
Identities = 39/208 (18%), Positives = 72/208 (34%), Gaps = 21/208 (10%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K +ITG G+G K+ V G A + D ++ + + D
Sbjct: 7 KVAIITGGAGGIGETTAKLFVRYG----AKVVIADIADDHGQKVCNNIGSPDVISFVHCD 62
Query: 62 VTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIA-AKFTRLGLLKPEQMTDHFLVNVTAP 120
VT ++++ I+ K L+++ N G+ + E +NV
Sbjct: 63 VTKDEDVRNLVDTTIA---KHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGA 119
Query: 121 LMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNA 180
++ K + + + +IV +SI +G H Y +K A+
Sbjct: 120 FLVAKHAAR-----------VMIPAKKGSIVFTASISSFT--AGEGVSHVYTATKHAVLG 166
Query: 181 ATRSLSIDLKGDKIIATAMHPGWVKTDM 208
T SL +L I + P V + +
Sbjct: 167 LTTSLCTELGEYGIRVNCVSPYIVASPL 194
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Score = 88.9 bits (220), Expect = 8e-22
Identities = 53/215 (24%), Positives = 87/215 (40%), Gaps = 30/215 (13%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDK----AVELLALAQQHSNLHV 57
K+++ITG + G+G + G A++ T R+ ++ +L ++
Sbjct: 6 KTVIITGSSNGIGRTTAILFAQEG----ANVTITGRSSERLEETRQIILKSGVSEKQVNS 61
Query: 58 IELDVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFL--- 114
+ DVT QD + + ++VLVNNAG A G +Q D +
Sbjct: 62 VVADVTT-EDGQDQIINSTLK--QFGKIDVLVNNAGAA-IPDAFGTTGTDQGIDIYHKTL 117
Query: 115 -VNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRC 173
+N+ A + +TK + P L + G V+ Q F Y
Sbjct: 118 KLNLQAVIEMTKKVKPHLVASK--------GEIVNVSSIVAGPQA------QPDFLYYAI 163
Query: 174 SKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
+KAAL+ TRS +IDL I ++ PG V+T
Sbjct: 164 AKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGF 198
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Score = 88.9 bits (220), Expect = 9e-22
Identities = 65/240 (27%), Positives = 103/240 (42%), Gaps = 30/240 (12%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDK----AVELLALAQQHSNLHV 57
KS++ITG + G+G + G A + T RN+D+ ++L ++
Sbjct: 5 KSVIITGSSNGIGRSAAVIFAKEG----AQVTITGRNEDRLEETKQQILKAGVPAEKINA 60
Query: 58 IELDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKP-EQMTDHFLV 115
+ DVT+ S Q D+ I+ + G +++LVNNAG +P E F +
Sbjct: 61 VVADVTEASGQDDI----INTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKL 116
Query: 116 NVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSK 175
N A + +T+ L ++ IVNVSSI+ G+ Y C+K
Sbjct: 117 NFQAVIEMTQKTKE------------HLIKTKGEIVNVSSIVAGP--QAHSGYPYYACAK 162
Query: 176 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQSLGEAH 235
AAL+ TR +IDL + ++ PG V T G+ E A+ + FI S E
Sbjct: 163 AALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPE--TASDKLYSFIGSRKECI 220
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 87.8 bits (217), Expect = 2e-21
Identities = 45/228 (19%), Positives = 86/228 (37%), Gaps = 28/228 (12%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIEL 60
K++L+TG +G+G +++ G G A I RN+ + E L+ ++ +
Sbjct: 9 KTVLVTGGTKGIGHAIVEEFAGFG----AVIHTCARNEYELNECLSKWQKKGFQVTGSVC 64
Query: 61 DVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAP 120
D + +++ L + +S + + L++L+NN G + E + H N+ +
Sbjct: 65 DASL-RPEREKLMQTVSSMFGGK-LDILINNLGAI-RSKPTLDYTAEDFSFHISTNLESA 121
Query: 121 LMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFH---PYRCSKAA 177
L++ PLLK +I+ Y +K A
Sbjct: 122 YHLSQLAHPLLKA-----------------SGCGNIIFMSSIAGVVSASVGSIYSATKGA 164
Query: 178 LNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGII 225
LN R+L+ + D I A A+ P + T + + E
Sbjct: 165 LNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFKKVVISRK 212
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Score = 85.3 bits (210), Expect = 3e-20
Identities = 43/211 (20%), Positives = 74/211 (35%), Gaps = 25/211 (11%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELL----ALAQQHSNLHV 57
+LITGC+ G+GL + L + ++AT R+ L ALA +L
Sbjct: 3 TVVLITGCSSGIGLHLAVRLASDPSQS-FKVYATLRDLKTQGRLWEAARALACPPGSLET 61
Query: 58 IELDVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNV 117
++LDV D + +G ++ L L + + VNV
Sbjct: 62 LQLDVRDSKSVAAARERV------TEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNV 115
Query: 118 TAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAA 177
+ + + LP +K+ ++ S+ G + Y SK A
Sbjct: 116 VGTVRMLQAFLPDMKR-----------RGSGRVLVTGSVGGLM---GLPFNDVYCASKFA 161
Query: 178 LNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
L SL++ L + + + G V T
Sbjct: 162 LEGLCESLAVLLLPFGVHLSLIECGPVHTAF 192
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Score = 84.3 bits (208), Expect = 4e-20
Identities = 41/208 (19%), Positives = 82/208 (39%), Gaps = 23/208 (11%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIEL 60
K L+TG RG+G + K+L +H+ R + ++ +
Sbjct: 11 KVALVTGAGRGIGREIAKMLAKSV----SHVICISRTQKSCDSVVDEIKSFGYESSGYAG 66
Query: 61 DVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAP 120
DV+ + +V I+ ++ + ++ N + +K ++ D N+ +
Sbjct: 67 DVSKKEEISEV----INKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSL 122
Query: 121 LMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNA 180
+T+ + + + I+N+SSI+G G Y SKA +
Sbjct: 123 FYITQPISKRMIN-----------NRYGRIINISSIVGLT---GNVGQANYSSSKAGVIG 168
Query: 181 ATRSLSIDLKGDKIIATAMHPGWVKTDM 208
T+SL+ +L I A+ PG++ +DM
Sbjct: 169 FTKSLAKELASRNITVNAIAPGFISSDM 196
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Score = 84.4 bits (208), Expect = 4e-20
Identities = 52/226 (23%), Positives = 88/226 (38%), Gaps = 18/226 (7%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA--LAQQHSNLHVIE 59
K+I++TG NRG+GL + + G A++ R+ AVE+ + +
Sbjct: 10 KTIIVTGGNRGIGLAFTRAVAAAG----ANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQ 65
Query: 60 LDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVT 118
DV++ I + D G ++ L+ NAG++ L E + VNV
Sbjct: 66 CDVSNTDIVTKT----IQQIDADLGPISGLIANAGVS-VVKPATELTHEDFAFVYDVNVF 120
Query: 119 APLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAAL 178
+ + L + + S S + I+N SS+ GS+ Y SKAA
Sbjct: 121 GVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSL------TQVFYNSSKAAC 174
Query: 179 NAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGI 224
+ + L+ + I A+ PG+V TD + I
Sbjct: 175 SNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIRDHQASNI 220
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Score = 83.5 bits (206), Expect = 6e-20
Identities = 40/210 (19%), Positives = 78/210 (37%), Gaps = 25/210 (11%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA--LAQQHSNLHVIE 59
+ L+TG +RGLG G+ + L G + RN ++A E +
Sbjct: 6 RVALVTGGSRGLGFGIAQGLAEAG----CSVVVASRNLEEASEAAQKLTEKYGVETMAFR 61
Query: 60 LDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVT 118
DV+++ + + + + V + G L+ +VN AGI + ++ VN+
Sbjct: 62 CDVSNYEEVKKL----LEAVKEKFGKLDTVVNAAGIN-RRHPAEEFPLDEFRQVIEVNLF 116
Query: 119 APLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAAL 178
+ + L ++ ++E+ T Y SK +
Sbjct: 117 GTYYVCREA-------------FSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGV 163
Query: 179 NAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
+ T++L+ + I + PGW +T M
Sbjct: 164 ASLTKALAKEWGRYGIRVNVIAPGWYRTKM 193
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Score = 82.9 bits (204), Expect = 1e-19
Identities = 34/215 (15%), Positives = 71/215 (33%), Gaps = 22/215 (10%)
Query: 4 ILITGCNRGLGLGMIKVLVGLGNNQPAH---IFATCRNKDKAVELLA-LAQQHSNLHVIE 59
+LITG +G+G + + P + + R ++ + + I
Sbjct: 4 LLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTIT 63
Query: 60 LDVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTA 119
D++D + + + + +V+ G + N +F L L E N+
Sbjct: 64 ADISDMADVRRL----TTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKG 119
Query: 120 PLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALN 179
LT+ + L+++ I ++S+ + Y SK
Sbjct: 120 TFFLTQALFALMER-----------QHSGHIFFITSVAATK---AFRHSSIYCMSKFGQR 165
Query: 180 AATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAP 214
++ + + + T + PG V T M G
Sbjct: 166 GLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDD 200
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Score = 82.4 bits (203), Expect = 2e-19
Identities = 33/227 (14%), Positives = 67/227 (29%), Gaps = 28/227 (12%)
Query: 5 LITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTD 64
++T G+G L G + + + EL A A+ + +L
Sbjct: 4 IVTNVKHFGGMGSALRLSEAG----HTVACHDESFKQKDELEAFAETY-----PQLKPMS 54
Query: 65 FSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLML 123
+ ++ I V G ++VLV+N A +F + E P L
Sbjct: 55 EQEPAEL----IEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFAL 110
Query: 124 TKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNAATR 183
+ + ++ I + Y ++A
Sbjct: 111 VNAVASQ--------------MKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLAN 156
Query: 184 SLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQS 230
+LS +L I A+ P ++ ++ P E + ++
Sbjct: 157 ALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKK 203
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Score = 82.5 bits (203), Expect = 2e-19
Identities = 46/227 (20%), Positives = 83/227 (36%), Gaps = 25/227 (11%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA--LAQQHSNLHVIE 59
K L TG RG+G G+ L G A + + KA E + L + + I+
Sbjct: 7 KVALTTGAGRGIGRGIAIELGRRG----ASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQ 62
Query: 60 LDVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTA 119
D++ S+ + K +S GL+ +++N+G+ + + E F +N
Sbjct: 63 ADISKPSEVVALFDKAVS---HFGGLDFVMSNSGME-VWCDELEVTQELFDKVFNLNTRG 118
Query: 120 PLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALN 179
+ + L ++ + + + I Y SKAA+
Sbjct: 119 QFFVAQQGLKHCRRGGRIILTSSIAAVMTGI---------------PNHALYAGSKAAVE 163
Query: 180 AATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQ 226
R+ ++D + + PG VKTDM N+ G+ Q
Sbjct: 164 GFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQ 210
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Score = 79.6 bits (195), Expect = 2e-18
Identities = 43/233 (18%), Positives = 68/233 (29%), Gaps = 13/233 (5%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
+ITG GLGL + LVG G A + ++
Sbjct: 6 LVAVITGGASGLGLATAERLVGQG----ASAVLLDLPNSGGEAQAKKLGNNCVFAPADVT 61
Query: 62 VTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPL 121
+ L K V + A + E VN+
Sbjct: 62 SEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTF 121
Query: 122 MLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNAA 181
+ + + + + G R I+N +S+ Q G Y SK +
Sbjct: 122 NVIRLVAGEMGQNEPDQ-----GGQRGVIINTASVAAFE---GQVGQAAYSASKGGIVGM 173
Query: 182 TRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQSLGEA 234
T ++ DL I + PG T + S P +V A + F LG+
Sbjct: 174 TLPIARDLAPIGIRVMTIAPGLFGTPLLTS-LPEKVCNFLASQVPFPSRLGDP 225
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 78.9 bits (194), Expect = 5e-18
Identities = 35/233 (15%), Positives = 79/233 (33%), Gaps = 29/233 (12%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA------LAQQHSNL 55
+ ++TG G+G ++K L+ LG +++ R ++ + + +
Sbjct: 13 QVAIVTGGATGIGKAIVKELLELG----SNVVIASRKLERLKSAADELQANLPPTKQARV 68
Query: 56 HVIELDVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLV 115
I+ ++ + ++ + L K D +N LVNN G + + +
Sbjct: 69 IPIQCNIRN-EEEVNNLVKSTLD--TFGKINFLVNNGGGQ-FLSPAEHISSKGWHAVLET 124
Query: 116 NVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSK 175
N+T + K + K + + ++A ++
Sbjct: 125 NLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGF---------------PLAVHSGAAR 169
Query: 176 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFI 228
A + T+SL+++ I + PG + + N + G Q I
Sbjct: 170 AGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKI 222
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Score = 77.9 bits (191), Expect = 7e-18
Identities = 53/208 (25%), Positives = 92/208 (44%), Gaps = 22/208 (10%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIEL 60
+ L+TG ++G+G +++ L GLG A ++ RN+ + E L ++ N+
Sbjct: 7 TTALVTGGSKGIGYAIVEELAGLG----ARVYTCSRNEKELDECLEIWREKGLNVEGSVC 62
Query: 61 DVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAP 120
D+ ++D L + ++ V D LN+LVNNAG+ + N A
Sbjct: 63 DLLS-RTERDKLMQTVAHVF-DGKLNILVNNAGVV-IHKEAKDFTEKDYNIIMGTNFEAA 119
Query: 121 LMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNA 180
L++ PLLK + N ++ +SSI G + Y SK A+N
Sbjct: 120 YHLSQIAYPLLKASQNGN-----------VIFLSSIAG---FSALPSVSLYSASKGAINQ 165
Query: 181 ATRSLSIDLKGDKIIATAMHPGWVKTDM 208
T+SL+ + D I ++ PG + T +
Sbjct: 166 MTKSLACEWAKDNIRVNSVAPGVILTPL 193
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Score = 77.0 bits (189), Expect = 1e-17
Identities = 43/224 (19%), Positives = 81/224 (36%), Gaps = 29/224 (12%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K++LITG G+G +++ G A + A + E A + H + +D
Sbjct: 6 KAVLITGAAHGIGRATLELFAKEG----ARLVACDIEEGPLRE----AAEAVGAHPVVMD 57
Query: 62 VTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAP 120
V D + + ++ + G L+ +V+ AGI + + E VN+T
Sbjct: 58 VADPASVERG----FAEALAHLGRLDGVVHYAGIT-RDNFHWKMPLEDWELVLRVNLTGS 112
Query: 121 LMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNA 180
++ K +++ + + S G Y S A +
Sbjct: 113 FLVAKAASEAMREKNP---------------GSIVLTASRVYLGNLGQANYAASMAGVVG 157
Query: 181 ATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGI 224
TR+L+++L I + PG+++T M A A
Sbjct: 158 LTRTLALELGRWGIRVNTLAPGFIETRMTAKVPEKVREKAIAAT 201
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 77.1 bits (189), Expect = 1e-17
Identities = 45/207 (21%), Positives = 78/207 (37%), Gaps = 29/207 (14%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K I++T +G+G G A + AT N+ K EL +++ + LD
Sbjct: 7 KVIILTAAAQGIGQAAALAFAREG----AKVIATDINESKLQEL----EKYPGIQTRVLD 58
Query: 62 VTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPL 121
VT + + + L+VL N AG + + + +NV +
Sbjct: 59 VTKKKQIDQFANEV-------ERLDVLFNVAGFV-HHGTVLDCEEKDWDFSMNLNVRSMY 110
Query: 122 MLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNAA 181
++ K LP + I+N+SS+ S++ Y +KAA+
Sbjct: 111 LMIKAFLPKMLA-----------QKSGNIINMSSVASSVKGVVNRC--VYSTTKAAVIGL 157
Query: 182 TRSLSIDLKGDKIIATAMHPGWVKTDM 208
T+S++ D I + PG V T
Sbjct: 158 TKSVAADFIQQGIRCNCVCPGTVDTPS 184
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Score = 75.6 bits (185), Expect = 4e-17
Identities = 41/233 (17%), Positives = 71/233 (30%), Gaps = 25/233 (10%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
+S L+TG GLG L G + ++ +L +E D
Sbjct: 2 RSALVTGGASGLGRAAALALKARG----YRVVVLDLRREGE-----------DLIYVEGD 46
Query: 62 VTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPL 121
VT + + + + ++ + G E VN+
Sbjct: 47 VTREEDVRRAVARAQEEAPLFAVVSAAGVGLA-EKILGKEGPHGLESFRRVLEVNLLGTF 105
Query: 122 MLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNAA 181
+ + +++ R IVN +S+ Q G Y SK + A
Sbjct: 106 NVLRLAAWAMRENP-----PDAEGQRGVIVNTASVAAFE---GQIGQAAYAASKGGVVAL 157
Query: 182 TRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQSLGEA 234
T + +L G I + PG T + + A+ A + F LG
Sbjct: 158 TLPAARELAGWGIRVVTVAPGLFDTPLLQGLPE-KAKASLAAQVPFPPRLGRP 209
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 75.5 bits (185), Expect = 5e-17
Identities = 52/207 (25%), Positives = 85/207 (41%), Gaps = 24/207 (11%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K L++G RG+G ++ +V G A + ++ + A + + LD
Sbjct: 7 KVALVSGGARGMGASHVRAMVAEG----AKVVFGDILDEEGKAMAA--ELADAARYVHLD 60
Query: 62 VTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPL 121
VT + Q GL+VLVNNAGI T + VN+T
Sbjct: 61 VTQPA-QWKAAVDTAVT--AFGGLHVLVNNAGILNIGTIEDY-ALTEWQRILDVNLTGVF 116
Query: 122 MLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNAA 181
+ + ++ +K+A + I+N+SSI G H Y +K A+
Sbjct: 117 LGIRAVVKPMKEAGRGS-----------IINISSIEGLAGTVAC---HGYTATKFAVRGL 162
Query: 182 TRSLSIDLKGDKIIATAMHPGWVKTDM 208
T+S +++L I ++HPG VKT M
Sbjct: 163 TKSTALELGPSGIRVNSIHPGLVKTPM 189
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Score = 75.5 bits (185), Expect = 5e-17
Identities = 43/225 (19%), Positives = 71/225 (31%), Gaps = 24/225 (10%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIEL 60
K +ITG G+G + G A + + N D A ++ + Q
Sbjct: 12 KCAIITGAGAGIGKEIAITFATAG----ASVVVSDINADAANHVVDEIQQLGGQAFACRC 67
Query: 61 DVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAP 120
D+T + + IS K +++LVNNAG KP M
Sbjct: 68 DITSEQELSALADFAIS---KLGKVDILVNNAGGGGP-------KPFDMPMA-------- 109
Query: 121 LMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNA 180
+ + + + + +I +N Y SKAA +
Sbjct: 110 -DFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASH 168
Query: 181 ATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGII 225
R+++ DL I + PG + TD S E+
Sbjct: 169 LVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHT 213
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Score = 75.2 bits (184), Expect = 6e-17
Identities = 47/223 (21%), Positives = 95/223 (42%), Gaps = 24/223 (10%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K L+TG +RG+G + + L G A + T +++ A + +N + L+
Sbjct: 5 KIALVTGASRGIGRAIAETLAARG----AKVIGTATSENGAQAISD--YLGANGKGLMLN 58
Query: 62 VTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPL 121
VTD + + + +++LVNNAGI + + E N+++
Sbjct: 59 VTDPA---SIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIE-TNLSSVF 114
Query: 122 MLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNAA 181
L+K ++ + K I+ + S++G++ GG Y +KA L
Sbjct: 115 RLSKAVMRAMMKKR-----------HGRIITIGSVVGTM---GNGGQANYAAAKAGLIGF 160
Query: 182 TRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGI 224
++SL+ ++ I + PG+++TDM + + + A +
Sbjct: 161 SKSLAREVASRGITVNVVAPGFIETDMTRALSDDQRAGILAQV 203
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 74.5 bits (182), Expect = 1e-16
Identities = 26/215 (12%), Positives = 70/215 (32%), Gaps = 32/215 (14%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
+ +L+ G LG ++ + + +++ S ++++
Sbjct: 3 RRVLVYGGRGALGSRCVQAFRARN----WWVASIDVVENEE---------ASASVIVKMT 49
Query: 62 VTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPL 121
+ ++Q D + ++ ++ DQ ++ ++ AG A + + ++
Sbjct: 50 DSF-TEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTST 108
Query: 122 MLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNAA 181
+ + + A + + + G Y +K A++
Sbjct: 109 ISS-------------HLATKHLKEGGLLTLAGAKAAL---DGTPGMIGYGMAKGAVHQL 152
Query: 182 TRSLSIDLKG--DKIIATAMHPGWVKTDMGGSNAP 214
+SL+ G A A+ P + T M + P
Sbjct: 153 CQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMP 187
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Score = 74.0 bits (181), Expect = 1e-16
Identities = 41/208 (19%), Positives = 79/208 (37%), Gaps = 29/208 (13%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K+IL+TG G+G + + G A + A R + E A+A + + D
Sbjct: 6 KTILVTGAASGIGRAALDLFAREG----ASLVAVDREERLLAE--AVAALEAEAIAVVAD 59
Query: 62 VTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAP 120
V+D + V ++ +++ G L+ + + AG+A L E VN+T
Sbjct: 60 VSDPKAVEAV----FAEALEEFGRLHGVAHFAGVA-HSALSWNLPLEAWEKVLRVNLTGS 114
Query: 121 LMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNA 180
++ + +L+ + GS+ G Y K +
Sbjct: 115 FLVARKAGEVLE-----------------EGGSLVLTGSVAGLGAFGLAHYAAGKLGVVG 157
Query: 181 ATRSLSIDLKGDKIIATAMHPGWVKTDM 208
R+L+++L + + PG ++T M
Sbjct: 158 LARTLALELARKGVRVNVLLPGLIQTPM 185
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 74.4 bits (182), Expect = 2e-16
Identities = 37/213 (17%), Positives = 75/213 (35%), Gaps = 21/213 (9%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKA---VELLALAQQHSNLHVI 58
++TG +RG G + L L + + + + R++ E L Q + +
Sbjct: 7 AVCVLTGASRGFGRALAPQLARLL-SPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLA 65
Query: 59 ELDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIA--AKFTRLGLLKPEQMTDHFLV 115
D+ + Q +L + +L+NNA L + ++ +++ +
Sbjct: 66 AADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWAL 125
Query: 116 NVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSK 175
N+T+ L LT L + + + SS G+ Y K
Sbjct: 126 NLTSMLCLTSGTLNAFQDSPGLSKTVVNISS------------LCALQPYKGWGLYCAGK 173
Query: 176 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
AA + + L+ + + + PG + DM
Sbjct: 174 AARDMLYQVLAAEEPS--VRVLSYAPGPLDNDM 204
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Score = 73.2 bits (179), Expect = 4e-16
Identities = 48/236 (20%), Positives = 79/236 (33%), Gaps = 23/236 (9%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIEL 60
+ L+TG G+GL + + L G +F R ++ L L +
Sbjct: 3 EVALVTGATSGIGLEIARRLGKEG----LRVFVCARGEEGLRTTLKELREAGVEADGRTC 58
Query: 61 DVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTA 119
DV + + + ++ VV+ G ++VLVNNAG L E D N+T
Sbjct: 59 DVRSVPEIEAL----VAAVVERYGPVDVLVNNAGRP-GGGATAELADELWLDVVETNLTG 113
Query: 120 PLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALN 179
+TK +L +S PY SK +
Sbjct: 114 VFRVTKQVLKAGGMLERGTGRIVNIAST------------GGKQGVVHAAPYSASKHGVV 161
Query: 180 AATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQSLGEAH 235
T++L ++L I A+ PG+V+T M S + +
Sbjct: 162 GFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARV 217
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Score = 72.9 bits (178), Expect = 5e-16
Identities = 38/211 (18%), Positives = 76/211 (36%), Gaps = 26/211 (12%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQ---HSNLHVI 58
+ +LITG GLG L G A + + + A + + +
Sbjct: 5 RVVLITGGGSGLGRATAVRLAAEG----AKLSLVDVSSEGLEASKAAVLETAPDAEVLTT 60
Query: 59 ELDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNV 117
DV+D ++ + ++ + G ++ NNAGI K + +N+
Sbjct: 61 VADVSDEAQVEAY----VTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINL 116
Query: 118 TAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAA 177
+ + +L ++++ +VN +S+ G G Y +K
Sbjct: 117 RGVFLGLEKVLKIMRE-----------QGSGMVVNTASVGG---IRGIGNQSGYAAAKHG 162
Query: 178 LNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
+ TR+ +++ I A+ PG + T M
Sbjct: 163 VVGLTRNSAVEYGRYGIRINAIAPGAIWTPM 193
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Score = 72.5 bits (177), Expect = 7e-16
Identities = 38/210 (18%), Positives = 73/210 (34%), Gaps = 25/210 (11%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA--LAQQHSNLHVIE 59
K ++ITG + GLG M A + R+K+ + + + ++
Sbjct: 8 KVVVITGSSTGLGKSMAIRFATEK----AKVVVNYRSKEDEANSVLEEIKKVGGEAIAVK 63
Query: 60 LDVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVT 118
DVT S ++ + +K+ G L+V++NNAG+ + + N+T
Sbjct: 64 GDVTVESDVINL----VQSAIKEFGKLDVMINNAGLENPVSSHEM-SLSDWNKVIDTNLT 118
Query: 119 APLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAAL 178
+ + A V ++ E F Y SK +
Sbjct: 119 GAFL-------------GSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGM 165
Query: 179 NAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
T +L+++ I + PG + T +
Sbjct: 166 KLMTETLALEYAPKGIRVNNIGPGAINTPI 195
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Score = 72.6 bits (177), Expect = 7e-16
Identities = 47/226 (20%), Positives = 78/226 (34%), Gaps = 27/226 (11%)
Query: 5 LITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA---LAQQHSNLHVIELD 61
+ITG R +G + L G + R+ + A + L A + + + + D
Sbjct: 5 VITGGARRIGHSIAVRLHQQG----FRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGD 60
Query: 62 VTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGL----------LKPEQMT 110
++ S D I + G +VLVNNA L Q+
Sbjct: 61 LSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVA 120
Query: 111 DHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHP 170
+ F N APL L + + S ++V ++ ++ D GF
Sbjct: 121 ELFGSNAVAPLFLIRAFARRQGEGGAWRSR---------NLSVVNLCDAMTDLPLPGFCV 171
Query: 171 YRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLE 216
Y +K AL TR+ +++L I A+ PG E
Sbjct: 172 YTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMPQETQE 217
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Score = 72.5 bits (177), Expect = 8e-16
Identities = 41/208 (19%), Positives = 69/208 (33%), Gaps = 22/208 (10%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIEL 60
K L+TG +GL L G I N++ + A + ++
Sbjct: 6 KVCLVTGAGGNIGLATALRLAEEG----TAIALLDMNREALEKAEASVREKGVEARSYVC 61
Query: 61 DVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAP 120
DVT + + ++ L NNAG F + + +NVT
Sbjct: 62 DVTSEEAVIGTVDSVVR---DFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGA 118
Query: 121 LMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNA 180
+ K + + + IVN +S+ G Y SK A+ A
Sbjct: 119 FHVLKAVSRQMIT-----------QNYGRIVNTASMAGVK---GPPNMAAYGTSKGAIIA 164
Query: 181 ATRSLSIDLKGDKIIATAMHPGWVKTDM 208
T + ++DL I A+ PG++
Sbjct: 165 LTETAALDLAPYNIRVNAISPGYMGPGF 192
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Score = 70.9 bits (173), Expect = 4e-15
Identities = 45/209 (21%), Positives = 75/209 (35%), Gaps = 23/209 (11%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA--LAQQHSNLHVIE 59
K ITG GLG GM +L LG A R D +Q + +H I+
Sbjct: 26 KVAFITGGGTGLGKGMTTLLSSLG----AQCVIASRKMDVLKATAEQISSQTGNKVHAIQ 81
Query: 60 LDVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTA 119
DV D Q+ + + I N+++NNA L T +V
Sbjct: 82 CDVRDPDMVQNTVSELIK---VAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGT 138
Query: 120 PLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALN 179
+ + L+K A +++++I + G P +KA +
Sbjct: 139 AFVTLEIGKQLIKAQKGAA-----------FLSITTIY---AETGSGFVVPSASAKAGVE 184
Query: 180 AATRSLSIDLKGDKIIATAMHPGWVKTDM 208
A ++SL+ + + + PG +KT
Sbjct: 185 AMSKSLAAEWGKYGMRFNVIQPGPIKTKG 213
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 69.5 bits (169), Expect = 6e-15
Identities = 26/213 (12%), Positives = 65/213 (30%), Gaps = 32/213 (15%)
Query: 4 ILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVT 63
+++ G LG +++ G + + + + L +
Sbjct: 5 VIVYGGKGALGSAILEFFKKNG----YTVLNIDLSANDQADSNILVDGN----------K 50
Query: 64 DFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLML 123
++++Q+ + + + ++ ++ + AG A + + +V + +
Sbjct: 51 NWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIA 110
Query: 124 TKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNAATR 183
K LK + + + G+ +KAA++ T
Sbjct: 111 AKLATTHLKP-------------GGLLQLTGAAAAMGPTPSMIGYG---MAKAAVHHLTS 154
Query: 184 SLSIDLKG--DKIIATAMHPGWVKTDMGGSNAP 214
SL+ G D + P + T M P
Sbjct: 155 SLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMP 187
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Score = 70.1 bits (171), Expect = 7e-15
Identities = 41/209 (19%), Positives = 75/209 (35%), Gaps = 25/209 (11%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA--LAQQHSNLHVIE 59
K L+TG RG+G M L G + N ++ E + + + S+ ++
Sbjct: 19 KVALVTGAGRGIGREMAMELGRRG----CKVIVNYANSTESAEEVVAAIKKNGSDAACVK 74
Query: 60 LDVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTA 119
+V + + VK G +V + F + + PE+ F +N
Sbjct: 75 ANVGVVEDIVRM----FEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRG 130
Query: 120 PLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALN 179
+ + A ++ + SI G + + + SK A+
Sbjct: 131 QFFVAR-------------EAYKHLEIGGRLILMGSITGQAKAVPKHAVYS--GSKGAIE 175
Query: 180 AATRSLSIDLKGDKIIATAMHPGWVKTDM 208
R ++ID+ KI + PG +KTDM
Sbjct: 176 TFARCMAIDMADKKITVNVVAPGGIKTDM 204
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Score = 69.0 bits (168), Expect = 1e-14
Identities = 37/207 (17%), Positives = 80/207 (38%), Gaps = 24/207 (11%)
Query: 4 ILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA--LAQQHSNLHVIELD 61
+++TG +RG+G + L G + KA E ++ + D
Sbjct: 4 VVVTGASRGIGKAIALSLGKAG----CKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGD 59
Query: 62 VTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPL 121
V+ + + + + + G +V N + T L +K Q + +N+T
Sbjct: 60 VSKEADVEAM----MKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVF 115
Query: 122 MLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNAA 181
+ T+ ++ K + I+N++S++G I G Y +KA +
Sbjct: 116 LCTQAATKIMMK-----------KRKGRIINIASVVGLI---GNIGQANYAAAKAGVIGF 161
Query: 182 TRSLSIDLKGDKIIATAMHPGWVKTDM 208
+++ + + I + PG++ +DM
Sbjct: 162 SKTAAREGASRNINVNVVCPGFIASDM 188
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Score = 68.7 bits (167), Expect = 2e-14
Identities = 42/210 (20%), Positives = 77/210 (36%), Gaps = 25/210 (11%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA---LAQQHSNLHVI 58
K ++TG G+GLG+ L G A I +E + AQ +
Sbjct: 5 KVAVVTGSTSGIGLGIATALAAQG----ADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYD 60
Query: 59 ELDVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVT 118
D++ + + + + V+ G ++ N + E+ +N++
Sbjct: 61 GADLSKGEAVRGL----VDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLS 116
Query: 119 APLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAAL 178
A T LP +KK I+N++S G + Y +K +
Sbjct: 117 AVFHGTAAALPHMKK-----------QGFGRIINIASAHGLVASA---NKSAYVAAKHGV 162
Query: 179 NAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
T+ +++ G I A A+ PGWV+T +
Sbjct: 163 VGFTKVTALETAGQGITANAICPGWVRTPL 192
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Score = 65.1 bits (158), Expect = 3e-13
Identities = 38/207 (18%), Positives = 72/207 (34%), Gaps = 36/207 (17%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K +L+ +RG+G + VL G A + RN++
Sbjct: 5 KGVLVLAASRGIGRAVADVLSQEG----AEVTICARNEELLKRSGH-----------RYV 49
Query: 62 VTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPL 121
V D K D+LF+ + + +++LV NAG K L E + +
Sbjct: 50 VCDLRKDLDLLFEKV------KEVDILVLNAGGP-KAGFFDELTNEDFKEAIDSLFLNMI 102
Query: 122 MLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNAA 181
+ + LP +K+ + +I + + ++ AL
Sbjct: 103 KIVRNYLPAMKEKGWGR--------------IVAITSFSVISPIENLYTSNSARMALTGF 148
Query: 182 TRSLSIDLKGDKIIATAMHPGWVKTDM 208
++LS ++ I + PGW +T+
Sbjct: 149 LKTLSFEVAPYGITVNCVAPGWTETER 175
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Score = 64.4 bits (156), Expect = 6e-13
Identities = 44/209 (21%), Positives = 75/209 (35%), Gaps = 24/209 (11%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIEL 60
K L+TG +G+G + LV G + N A + + + Q + +++
Sbjct: 2 KVALVTGAGQGIGKAIALRLVKDG----FAVAIADYNDATAKAVASEINQAGGHAVAVKV 57
Query: 61 DVTDFSKQQDVLFKDISDVVKDQG-LNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTA 119
DV+D +D +F + K G +V+VNNAG+A + + +NV
Sbjct: 58 DVSD----RDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYN-INVKG 112
Query: 120 PLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALN 179
+ + + KK + + Y SK A+
Sbjct: 113 VIWGIQAAVEAFKK-------------EGHGGKIINACSQAGHVGNPELAVYSSSKFAVR 159
Query: 180 AATRSLSIDLKGDKIIATAMHPGWVKTDM 208
T++ + DL I PG VKT M
Sbjct: 160 GLTQTAARDLAPLGITVNGYCPGIVKTPM 188
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Score = 63.7 bits (154), Expect = 1e-12
Identities = 40/207 (19%), Positives = 72/207 (34%), Gaps = 23/207 (11%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K+ LITG RG+G + V G A + N + A A + I LD
Sbjct: 6 KTALITGSARGIGRAFAEAYVREG----ARVAIADINLEAARATAA--EIGPAACAIALD 59
Query: 62 VTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPL 121
VTD + +++++ G ++ N + + E F +NV+ L
Sbjct: 60 VTDQASIDRC----VAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTL 115
Query: 122 MLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNAA 181
+ + + + + S + Y +KAA+ +
Sbjct: 116 FMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGV-------------YCATKAAVISL 162
Query: 182 TRSLSIDLKGDKIIATAMHPGWVKTDM 208
T+S ++L I A+ PG V +
Sbjct: 163 TQSAGLNLIRHGINVNAIAPGVVDGEH 189
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 61.7 bits (149), Expect = 4e-12
Identities = 51/223 (22%), Positives = 86/223 (38%), Gaps = 32/223 (14%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
+S+L+TG NRG+GL + + L G + T R L +E+D
Sbjct: 8 RSVLVTGGNRGIGLAIAQRLAADG----HKVAVTHRGSGAPKGLFG----------VEVD 53
Query: 62 VTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPL 121
VTD S D F + + + VLV+NAG++A +MT+ V
Sbjct: 54 VTD-SDAVDRAFTAVEE--HQGPVEVLVSNAGLSADA------FLMRMTEEKFEKVINAN 104
Query: 122 MLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNAA 181
+ + + S + + ++ + S+ G G Y SKA +
Sbjct: 105 LTGAFRVA------QRASRSMQRNKFGRMIFIGSVSGLW---GIGNQANYAASKAGVIGM 155
Query: 182 TRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGI 224
RS++ +L + A + PG++ TDM + A I
Sbjct: 156 ARSIARELSKANVTANVVAPGYIDTDMTRALDERIQQGALQFI 198
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Score = 61.4 bits (148), Expect = 6e-12
Identities = 41/212 (19%), Positives = 73/212 (34%), Gaps = 28/212 (13%)
Query: 2 KSILITGC--NRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIE 59
K L+ G R LG + L G A + + + + E LA+ +
Sbjct: 9 KKALVMGVTNQRSLGFAIAAKLKEAG----AEVALSYQAERLRPEAEKLAEALGGALLFR 64
Query: 60 LDVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFL---VN 116
DVT + + GL+ LV+ A + G + D L V+
Sbjct: 65 ADVTQDEELDALFAGVKE---AFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVS 121
Query: 117 VTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKA 176
+ + + + PLL++ IV ++ ++ +KA
Sbjct: 122 AYSLVAVARRAEPLLRE-------------GGGIVTLTYYASEK---VVPKYNVMAIAKA 165
Query: 177 ALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
AL A+ R L+ +L + A+ G V+T
Sbjct: 166 ALEASVRYLAYELGPKGVRVNAISAGPVRTVA 197
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Score = 59.9 bits (144), Expect = 2e-11
Identities = 42/240 (17%), Positives = 74/240 (30%), Gaps = 34/240 (14%)
Query: 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIEL 60
M I+I+GC G+G KVL G I + +
Sbjct: 1 MSIIVISGCATGIGAATRKVLEAAG----HQIVGIDIRDAEVIA---------------- 40
Query: 61 DVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAP 120
D++ ++ + ++ +G++ LV AG+ + LG + +
Sbjct: 41 DLSTAEGRKQAIADVLAKC--SKGMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFL 98
Query: 121 LMLTK--------TMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYR 172
L K + + L +I+ QGG Y
Sbjct: 99 PALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHA--GEQGGNLAYA 156
Query: 173 CSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQSLG 232
SK AL A R + + + PG +T + A L+ I +F+ +G
Sbjct: 157 GSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPL--LQAGLQDPRYGESIAKFVPPMG 214
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Score = 58.4 bits (140), Expect = 8e-11
Identities = 31/210 (14%), Positives = 74/210 (35%), Gaps = 23/210 (10%)
Query: 2 KSILITGCNRGLGLG--MIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIE 59
K IL+TG L + + + + G A + T +N + A Q + V++
Sbjct: 6 KRILVTGVASKLSIAYGIAQAMHREG----AELAFTYQNDKLKGRVEEFAAQLGSDIVLQ 61
Query: 60 LDVTDFSKQQDVLFKDISDVVK-DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVT 118
DV + + + + K D ++ + G + + E ++
Sbjct: 62 CDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSY 121
Query: 119 APLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAAL 178
+ + + K +L +A++ +S + ++ +KA+L
Sbjct: 122 SFVAMAKACRSMLNP-------------GSALLTLSYLGAER---AIPNYNVMGLAKASL 165
Query: 179 NAATRSLSIDLKGDKIIATAMHPGWVKTDM 208
A R ++ + + + A+ G ++T
Sbjct: 166 EANVRYMANAMGPEGVRVNAISAGPIRTLA 195
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Score = 54.5 bits (130), Expect = 8e-10
Identities = 22/197 (11%), Positives = 54/197 (27%), Gaps = 33/197 (16%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
K ++ +G+ +L + A + R DKA + ++V +
Sbjct: 24 KKAVVLAGTGPVGMRSAALL----AGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAE 79
Query: 62 VTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPL 121
D + + + + +G + + I + LL + + + A
Sbjct: 80 TADDASRAEAV----------KGAHFVFTAGAIGLE-----LLPQAAWQNESSIEIVADY 124
Query: 122 MLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNAA 181
+ A + + G++ G + +A +
Sbjct: 125 NAQPPLGIGGIDA----------TDKGKEYGGKRAFGAL----GIGGLKLKLHRACIAKL 170
Query: 182 TRSLSIDLKGDKIIATA 198
S ++I A
Sbjct: 171 FESSEGVFDAEEIYKLA 187
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Score = 41.1 bits (95), Expect = 5e-05
Identities = 32/223 (14%), Positives = 61/223 (27%), Gaps = 27/223 (12%)
Query: 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELD 61
++L+TG G+G + + L G H+ R+ A L + L
Sbjct: 10 GTVLVTGGTGGVGGQIARWLARRG---APHLLLVSRSGPDADGAGELVAELEALGARTTV 66
Query: 62 VTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPL 121
++ + + + + D L+ + + T T
Sbjct: 67 AACDVTDRESVRELLGGIGDDVPLSAVFHA----------------AATLDDGTVDTLTG 110
Query: 122 MLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNAA 181
+ + A V SS + G Y A L+
Sbjct: 111 ERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAPGLG---GYAPGNAYLDGL 167
Query: 182 TRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGI 224
+ + D + ATA+ G G + P+ G+
Sbjct: 168 AQQ----RRSDGLPATAVAWGTW-AGSGMAEGPVADRFRRHGV 205
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 38.2 bits (88), Expect = 5e-04
Identities = 31/220 (14%), Positives = 68/220 (30%), Gaps = 39/220 (17%)
Query: 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIEL 60
MK ILITG +G +++ ++ + + +E L+ + + +
Sbjct: 1 MK-ILITGGAGFIGSAVVRHIIKNTQDT--VVNIDKLTYAGNLESLSDISESNRYNFEHA 57
Query: 61 DVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAP 120
D+ D ++ + + D V ++ A A + P + N+
Sbjct: 58 DICDSAEITRIFEQYQPDAV--------MHLA--AESHVDRSITGPAAFIE---TNIVG- 103
Query: 121 LMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI----------------EDNT 164
T +L + +K A + R ++ + G + E
Sbjct: 104 ---TYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTA 160
Query: 165 QGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWV 204
PY SKA+ + R+ + + +
Sbjct: 161 YAPSSPYSASKASSDHLVRAWR---RTYGLPTIVTNCSNN 197
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 248 | |||
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 100.0 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 100.0 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 100.0 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 100.0 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 100.0 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 100.0 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 100.0 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 100.0 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 100.0 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 100.0 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 100.0 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 100.0 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 100.0 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 100.0 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 100.0 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 100.0 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 100.0 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 100.0 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 100.0 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 100.0 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 100.0 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 100.0 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 100.0 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 100.0 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 100.0 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 100.0 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 100.0 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 100.0 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 100.0 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 100.0 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 100.0 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 100.0 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 100.0 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 100.0 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 100.0 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 100.0 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 100.0 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 100.0 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 100.0 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 100.0 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 100.0 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 100.0 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 100.0 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 100.0 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 100.0 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 100.0 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 100.0 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 100.0 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 100.0 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 100.0 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 100.0 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 100.0 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 100.0 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 100.0 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 100.0 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 100.0 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 100.0 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 100.0 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 100.0 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 100.0 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 100.0 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 100.0 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 100.0 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 99.98 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 99.97 | |
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 99.79 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 99.76 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.74 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 99.68 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.67 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.67 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 99.66 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 99.65 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 99.64 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 99.64 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 99.63 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 99.63 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 99.61 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 99.6 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.6 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 99.59 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 99.58 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 99.57 | |
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 99.57 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.53 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 99.52 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 99.49 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.49 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 99.49 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 99.3 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 99.3 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 99.25 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 99.19 | |
| d1jaya_ | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae | 99.16 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 99.13 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 99.05 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 99.03 | |
| d1a5za1 | 140 | Lactate dehydrogenase {Thermotoga maritima [TaxId: | 97.78 | |
| d1nyta1 | 170 | Shikimate 5-dehydrogenase AroE {Escherichia coli [ | 97.71 | |
| d1yb5a2 | 174 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 97.68 | |
| d1ez4a1 | 146 | Lactate dehydrogenase {Lactobacillus pentosus [Tax | 97.67 | |
| d1vi2a1 | 182 | Putative shikimate dehydrogenase YdiB {Escherichia | 97.64 | |
| d1qora2 | 179 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 97.64 | |
| d1v3va2 | 182 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 97.63 | |
| d1p77a1 | 171 | Shikimate 5-dehydrogenase AroE {Haemophilus influe | 97.62 | |
| d1hyha1 | 146 | L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La | 97.6 | |
| d1guza1 | 142 | Malate dehydrogenase {Chlorobium vibrioforme [TaxI | 97.59 | |
| d1pqwa_ | 183 | Putative enoyl reductase domain of polyketide synt | 97.54 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 97.54 | |
| d1gu7a2 | 189 | 2,4-dienoyl-CoA reductase {Yeast (Candida tropical | 97.52 | |
| d1e3ja2 | 170 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 97.51 | |
| d1ldna1 | 148 | Lactate dehydrogenase {Bacillus stearothermophilus | 97.49 | |
| d1mlda1 | 144 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 97.44 | |
| d1vj0a2 | 182 | Hypothetical protein TM0436 {Thermotoga maritima [ | 97.42 | |
| d1o6za1 | 142 | Malate dehydrogenase {Archaeon Haloarcula marismor | 97.39 | |
| d1gpja2 | 159 | Glutamyl tRNA-reductase middle domain {Archaeon Me | 97.37 | |
| d1hyea1 | 145 | MJ0490, lactate/malate dehydrogenase {Archaeon Met | 97.35 | |
| d2cmda1 | 145 | Malate dehydrogenase {Escherichia coli [TaxId: 562 | 97.34 | |
| d1e5qa1 | 182 | Saccharopine reductase {Rice blast fungus (Magnapo | 97.3 | |
| d1ojua1 | 142 | Malate dehydrogenase {Archaeon Archaeoglobus fulgi | 97.3 | |
| d1y7ta1 | 154 | Malate dehydrogenase {Thermus thermophilus [TaxId: | 97.29 | |
| d1xa0a2 | 176 | B. subtilis YhfP homologue {Bacillus stearothermop | 97.28 | |
| d1o8ca2 | 77 | Hypothetical protein YhdH {Escherichia coli [TaxId | 97.25 | |
| d1uxja1 | 142 | Malate dehydrogenase {Chloroflexus aurantiacus [Ta | 97.24 | |
| d2ldxa1 | 159 | Lactate dehydrogenase {Mouse (Mus musculus) [TaxId | 97.22 | |
| d1y6ja1 | 142 | Lactate dehydrogenase {Clostridium thermocellum [T | 97.21 | |
| d1jvba2 | 170 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 97.17 | |
| d1pl8a2 | 171 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 97.16 | |
| d1i0za1 | 160 | Lactate dehydrogenase {Human (Homo sapiens), heart | 97.12 | |
| d1iz0a2 | 171 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 97.07 | |
| d1llda1 | 143 | Lactate dehydrogenase {Bifidobacterium longum, str | 97.04 | |
| d1tt7a2 | 167 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 97.01 | |
| d1vj1a2 | 187 | Putative zinc-binding alcohol dehydrogenase {Mouse | 96.97 | |
| d2jhfa2 | 176 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 96.95 | |
| d1jqba2 | 174 | Bacterial secondary alcohol dehydrogenase {Clostri | 96.92 | |
| d1kola2 | 195 | Formaldehyde dehydrogenase {Pseudomonas putida [Ta | 96.92 | |
| d1d1ta2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 96.92 | |
| d1o89a2 | 177 | Hypothetical protein YhdH {Escherichia coli [TaxId | 96.91 | |
| d1pzga1 | 154 | Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5 | 96.86 | |
| d1t2da1 | 150 | Lactate dehydrogenase {Malaria parasite (Plasmodiu | 96.82 | |
| d1p0fa2 | 174 | Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: | 96.75 | |
| d2hmva1 | 134 | Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | 96.75 | |
| d1npya1 | 167 | Shikimate 5-dehydrogenase-like protein HI0607 {Hae | 96.74 | |
| d1e3ia2 | 174 | Alcohol dehydrogenase {Mouse (Mus musculus), class | 96.73 | |
| d7mdha1 | 175 | Malate dehydrogenase {Sorghum (Sorghum vulgare), c | 96.72 | |
| d2pv7a2 | 152 | Prephenate dehydrogenase TyrA {Haemophilus influen | 96.57 | |
| d5mdha1 | 154 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 96.55 | |
| d1f8fa2 | 174 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 96.44 | |
| d1vpda2 | 161 | Hydroxyisobutyrate dehydrogenase {Salmonella typhi | 96.42 | |
| d2fzwa2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 96.41 | |
| d3cuma2 | 162 | Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru | 96.4 | |
| d1piwa2 | 168 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 96.34 | |
| d1h2ba2 | 172 | Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ | 96.29 | |
| d1uufa2 | 168 | Hypothetical protein YahK {Escherichia coli [TaxId | 96.29 | |
| d1cdoa2 | 175 | Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI | 96.1 | |
| d2f1ka2 | 165 | Prephenate dehydrogenase TyrA {Synechocystis sp. p | 96.08 | |
| d1bg6a2 | 184 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A | 96.06 | |
| d1pgja2 | 178 | 6-phosphogluconate dehydrogenase {Trypanosoma bruc | 95.9 | |
| d2pgda2 | 176 | 6-phosphogluconate dehydrogenase {Sheep (Ovis orie | 95.79 | |
| d1llua2 | 166 | Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax | 95.77 | |
| d1vm6a3 | 128 | Dihydrodipicolinate reductase {Thermotoga maritima | 95.73 | |
| d2g5ca2 | 171 | Prephenate dehydrogenase TyrA {Aquifex aeolicus [T | 95.64 | |
| d1id1a_ | 153 | Rck domain from putative potassium channel Kch {Es | 95.63 | |
| d1u7za_ | 223 | Coenzyme A biosynthesis bifunctional protein CoaBC | 95.59 | |
| d1f0ya2 | 192 | Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum | 95.58 | |
| d1q0qa2 | 151 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {E | 95.52 | |
| d1nvta1 | 177 | Shikimate 5-dehydrogenase AroE {Archaeon Methanoco | 95.44 | |
| d1ks9a2 | 167 | Ketopantoate reductase PanE {Escherichia coli [Tax | 95.38 | |
| d2ahra2 | 152 | Pyrroline-5-carboxylate reductase ProC {Streptococ | 95.37 | |
| d1rjwa2 | 168 | Alcohol dehydrogenase {Bacillus stearothermophilus | 95.26 | |
| d1obba1 | 171 | Alpha-glucosidase AglA {Thermotoga maritima [TaxId | 95.23 | |
| d1s6ya1 | 169 | 6-phospho-beta-glucosidase {Bacillus stearothermop | 95.15 | |
| d1wdka3 | 186 | Fatty oxidation complex alpha subunit, middle doma | 94.94 | |
| d1u8xx1 | 167 | Maltose-6'-phosphate glucosidase GlvA {Bacillus su | 94.82 | |
| d1yqga2 | 152 | Pyrroline-5-carboxylate reductase ProC {Neisseria | 94.77 | |
| d1up7a1 | 162 | 6-phospho-beta-glucosidase {Thermotoga maritima [T | 94.68 | |
| d1n1ea2 | 189 | Glycerol-3- phosphate dehydrogenase {Trypanosome ( | 94.52 | |
| d1yl7a1 | 135 | Dihydrodipicolinate reductase {Mycobacterium tuber | 94.0 | |
| d1mv8a2 | 202 | GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos | 93.84 | |
| d1i36a2 | 152 | Conserved hypothetical protein MTH1747 {Archaeon M | 93.79 | |
| d2jfga1 | 93 | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase | 93.79 | |
| d1txga2 | 180 | Glycerol-3- phosphate dehydrogenase {Archaeoglobus | 93.68 | |
| d1m6ya2 | 192 | TM0872, methyltransferase domain {Thermotoga marit | 93.53 | |
| d1t4ba1 | 146 | Aspartate beta-semialdehyde dehydrogenase {Escheri | 93.5 | |
| d1pjqa1 | 113 | Siroheme synthase CysG, domain 1 {Salmonella typhi | 93.47 | |
| d1y8ca_ | 246 | Putative methyltransferase CAC2371 {Clostridium ac | 93.03 | |
| d2fyta1 | 311 | Protein arginine N-methyltransferase 3, PRMT3 {Hum | 92.91 | |
| d1jg1a_ | 215 | Protein-L-isoaspartyl O-methyltransferase {Archaeo | 92.88 | |
| d1j6ua1 | 89 | UDP-N-acetylmuramate-alanine ligase MurC {Thermoto | 91.55 | |
| d1pjca1 | 168 | L-alanine dehydrogenase {Phormidium lapideum [TaxI | 91.24 | |
| d1wzna1 | 251 | Hypothetical methyltransferase PH1305 {Archaeon Py | 90.92 | |
| d1ve3a1 | 226 | Hypothetical protein PH0226 {Archaeon Pyrococcus h | 90.75 | |
| d1nv8a_ | 271 | N5-glutamine methyltransferase, HemK {Thermotoga m | 90.7 | |
| d1vbfa_ | 224 | Protein-L-isoaspartyl O-methyltransferase {Sulfolo | 90.66 | |
| d1kyqa1 | 150 | Bifunctional dehydrogenase/ferrochelatase Met8p, N | 90.43 | |
| d1ne2a_ | 197 | Hypothetical protein Ta1320 {Archaeon Thermoplasma | 90.42 | |
| d2fy8a1 | 129 | Potassium channel-related protein MthK {Archaeon M | 90.11 | |
| d1dl5a1 | 213 | Protein-L-isoaspartyl O-methyltransferase {Thermot | 89.95 | |
| d1oria_ | 316 | Protein arginine N-methyltransferase 1, PRMT1 {Rat | 89.68 | |
| d1wy7a1 | 201 | Hypothetical protein PH1948 {Archaeon Pyrococcus h | 89.58 | |
| d1c1da1 | 201 | Phenylalanine dehydrogenase {Rhodococcus sp., M4 [ | 89.52 | |
| d1p9oa_ | 290 | Phosphopantothenoylcysteine synthetase {Human (Hom | 89.45 | |
| d1li4a1 | 163 | S-adenosylhomocystein hydrolase {Human (Homo sapie | 89.12 | |
| d2bzga1 | 229 | Thiopurine S-methyltransferase {Human (Homo sapien | 88.95 | |
| d1l7da1 | 183 | Nicotinamide nucleotide transhydrogenase dI compon | 88.53 | |
| d2ivda1 | 347 | Protoporphyrinogen oxidase {Myxococcus xanthus [Ta | 88.45 | |
| d1pjza_ | 201 | Thiopurine S-methyltransferase {Pseudomonas syring | 88.21 | |
| d1vkna1 | 176 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 88.13 | |
| d1cp2a_ | 269 | Nitrogenase iron protein {Clostridium pasteurianum | 88.09 | |
| d2cvza2 | 156 | Hydroxyisobutyrate dehydrogenase {Thermus thermoph | 87.98 | |
| d1wxxa2 | 318 | Hypothetical protein TTHA1280, middle and C-termin | 87.79 | |
| d1hyqa_ | 232 | Cell division regulator MinD {Archaeon Archaeoglob | 87.74 | |
| d2g17a1 | 179 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 87.72 | |
| d1k0ia1 | 292 | p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a | 87.36 | |
| d1i1na_ | 224 | Protein-L-isoaspartyl O-methyltransferase {Human ( | 87.27 | |
| d1wg8a2 | 182 | TM0872, methyltransferase domain {Thermus thermoph | 87.0 | |
| d2b78a2 | 317 | Hypothetical protein SMu776, middle and C-terminal | 86.8 | |
| d1ryia1 | 276 | Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | 86.34 | |
| d2gv8a1 | 335 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 86.33 | |
| d1ygya1 | 184 | Phosphoglycerate dehydrogenase {Mycobacterium tube | 86.2 | |
| d1dlja2 | 196 | UDP-glucose dehydrogenase (UDPGDH) {Streptococcus | 86.18 | |
| d2d59a1 | 139 | Hypothetical protein PH1109 {Pyrococcus horikoshii | 85.86 | |
| d2i6ga1 | 198 | Putative methyltransferase TehB {Salmonella typhim | 85.86 | |
| d1g6q1_ | 328 | Arginine methyltransferase, HMT1 {Baker's yeast (S | 85.81 | |
| d3grsa2 | 125 | Glutathione reductase {Human (Homo sapiens) [TaxId | 85.57 | |
| d1v59a2 | 122 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 85.5 | |
| d2nxca1 | 254 | PrmA-like protein TTHA0656 (TT0836) {Thermus therm | 85.35 | |
| d2as0a2 | 324 | Hypothetical protein PH1915, middle and C-terminal | 85.31 | |
| d1vl5a_ | 231 | Hypothetical protein BH2331 {Bacillus halodurans [ | 85.15 | |
| d1r0ka2 | 150 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z | 85.03 | |
| d1djqa2 | 156 | Trimethylamine dehydrogenase, C-terminal domain {M | 84.99 | |
| d1r18a_ | 223 | Protein-L-isoaspartyl O-methyltransferase {Fruit f | 84.89 | |
| d1c0pa1 | 268 | D-aminoacid oxidase, N-terminal domain {Rhodotorul | 84.56 | |
| d1kjqa2 | 111 | Glycinamide ribonucleotide transformylase PurT, N- | 83.9 | |
| d1nhpa2 | 123 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 83.78 | |
| d1gtea4 | 196 | Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su | 83.72 | |
| d1jw9b_ | 247 | Molybdenum cofactor biosynthesis protein MoeB {Esc | 83.49 | |
| d1b0aa1 | 166 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 83.45 | |
| d1yovb1 | 426 | UBA3 {Human (Homo sapiens) [TaxId: 9606]} | 83.21 | |
| d1onfa2 | 117 | Glutathione reductase {Plasmodium falciparum [TaxI | 82.86 | |
| d1a4ia1 | 170 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 82.85 | |
| d1ydwa1 | 184 | Probable oxidoreductase At4g09670 {Thale cress (Ar | 82.83 | |
| d2voua1 | 265 | Dihydroxypyridine hydroxylase DhpH {Arthrobacter n | 82.78 | |
| d1ebda2 | 117 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 82.71 | |
| d2naca1 | 188 | Formate dehydrogenase {Pseudomonas sp., strain 101 | 82.26 | |
| d1byia_ | 224 | Dethiobiotin synthetase {Escherichia coli [TaxId: | 82.19 | |
| d1f0ka_ | 351 | Peptidoglycan biosynthesis glycosyltransferase Mur | 81.97 | |
| d1xxla_ | 234 | Hypothetical protein YcgJ {Bacillus subtilis [TaxI | 81.64 | |
| d1seza1 | 373 | Protoporphyrinogen oxidase {Tobacco (Nicotiana tab | 81.26 | |
| d3lada2 | 119 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 80.84 | |
| d1gsoa2 | 105 | Glycinamide ribonucleotide synthetase (GAR-syn), N | 80.83 | |
| d2cvoa1 | 183 | Putative semialdehyde dehydrogenase {Rice (Oryza s | 80.63 | |
| d1ps9a3 | 179 | 2,4-dienoyl-CoA reductase, middle domain {Escheric | 80.55 | |
| d2bcgg1 | 297 | Guanine nucleotide dissociation inhibitor, GDI {Ba | 80.51 | |
| d1t35a_ | 179 | Hypothetical protein YvdD {Bacillus subtilis [TaxI | 80.38 | |
| d1nhpa1 | 198 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 80.28 | |
| d1gesa2 | 116 | Glutathione reductase {Escherichia coli [TaxId: 56 | 80.21 | |
| d1dusa_ | 194 | Hypothetical protein MJ0882 {Archaeon Methanococcu | 80.06 |
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=100.00 E-value=1.4e-49 Score=326.90 Aligned_cols=243 Identities=55% Similarity=0.916 Sum_probs=216.6
Q ss_pred CceEEEecCCCchhHHHHHHHHh---CCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVG---LGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDIS 77 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~---~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~ 77 (248)
||++|||||++|||+++|++|++ +| ++|++.+|+.++++++.++....+++.++++|++|+++ ++++++.+.
T Consensus 2 MKtilITGas~GIG~a~a~~l~~~a~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~-v~~~~~~i~ 76 (248)
T d1snya_ 2 MNSILITGCNRGLGLGLVKALLNLPQPP----QHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDA-YDKLVADIE 76 (248)
T ss_dssp CSEEEESCCSSHHHHHHHHHHHTSSSCC----SEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGG-HHHHHHHHH
T ss_pred cCEEEEeCCCCHHHHHHHHHHHHHHhCC----CEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHH-HHHHHhhhH
Confidence 99999999999999999999974 56 99999999999998887777778899999999999999 999999987
Q ss_pred hhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCC
Q psy11190 78 DVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIM 157 (248)
Q Consensus 78 ~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~ 157 (248)
+....+++|+||||||+..+...+.+.+.++|++.+++|+.+++++++.++|+|+++...........+.|++|+++|.+
T Consensus 77 ~~~~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~ 156 (248)
T d1snya_ 77 GVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSIL 156 (248)
T ss_dssp HHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGG
T ss_pred HHhhcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccc
Confidence 64332369999999998766566788899999999999999999999999999998765554444455689999999999
Q ss_pred CcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCCCCchhhHHHHHHHHhhhccccccc
Q psy11190 158 GSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQSLGEAHNG 237 (248)
Q Consensus 158 ~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 237 (248)
+.....+.+++..|++||+|+.+|+++++.|++++||+||+|+||+++|+|.....+.++++.+..++..+.......+|
T Consensus 157 g~~~~~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m~~~~~~~~~~~~~~~i~~~i~~l~~~~tG 236 (248)
T d1snya_ 157 GSIQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGSSAPLDVPTSTGQIVQTISKLGEKQNG 236 (248)
T ss_dssp GCSTTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCTTCSBCHHHHHHHHHHHHHHCCGGGTT
T ss_pred cccCCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCcccccCCCCchHHHHHHHHHHHhcCccCCC
Confidence 88765555778899999999999999999999999999999999999999999998999999999999999888888899
Q ss_pred ceeeeCCeecC
Q psy11190 238 GFFEYTGKAIK 248 (248)
Q Consensus 238 ~~~~~~g~~~~ 248 (248)
+|++|||++||
T Consensus 237 ~~i~~dG~~ip 247 (248)
T d1snya_ 237 GFVNYDGTPLA 247 (248)
T ss_dssp CEECTTSCBCC
T ss_pred cEEEECCeEcC
Confidence 99999999987
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=3e-48 Score=319.20 Aligned_cols=225 Identities=23% Similarity=0.283 Sum_probs=203.1
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHH-hhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALA-QQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|++|||||++|||+++|++|+++| ++|++++|+.++++++.+.+ ..+.++.++++|++|+++ ++++++++.+.+
T Consensus 11 KvalITGas~GIG~a~a~~la~~G----a~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~-v~~~~~~~~~~~ 85 (251)
T d2c07a1 11 KVALVTGAGRGIGREIAKMLAKSV----SHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEE-ISEVINKILTEH 85 (251)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTTS----SEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHH-HHHHHHHHHHHC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcC----CEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHH-HHHHHHHHHHhc
Confidence 899999999999999999999999 99999999999999885444 445689999999999999 999999999999
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
| ++|+||||||.... .++.+.+.++|++.+++|+.++++++++++|.|.++ +.|+||++||.++..
T Consensus 86 g--~iDilvnnag~~~~-~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-----------~~G~IVnisS~~~~~ 151 (251)
T d2c07a1 86 K--NVDILVNNAGITRD-NLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINN-----------RYGRIINISSIVGLT 151 (251)
T ss_dssp S--CCCEEEECCCCCCC-CCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHH-----------TCEEEEEECCTHHHH
T ss_pred C--Cceeeeeccccccc-cccccccHHHHhhhheeeehhhhhhhhhcCcccccC-----------CCeEEEEECCHHhcC
Confidence 8 69999999998775 888899999999999999999999999999999987 689999999999988
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC---------------CCchhhHHHHHH
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA---------------PLEVGAATAGII 225 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~---------------~~~~~~~~~~~~ 225 (248)
+. ++..+|+++|+|+.+|+++|+.||+++|||||+|+||+++|+|..... ..+|+|++..+.
T Consensus 152 ~~---~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~ 228 (251)
T d2c07a1 152 GN---VGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQIKKNIISNIPAGRMGTPEEVANLAC 228 (251)
T ss_dssp CC---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHHHHHHHHTTCTTSSCBCHHHHHHHHH
T ss_pred CC---CCCHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEecccccccCHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence 77 888999999999999999999999999999999999999999976543 347999999999
Q ss_pred HHhhhcccccccceeeeCCeecC
Q psy11190 226 QFIQSLGEAHNGGFFEYTGKAIK 248 (248)
Q Consensus 226 ~~~~~~~~~~~g~~~~~~g~~~~ 248 (248)
+++++.+...+|+.+.+||..-|
T Consensus 229 fL~S~~s~~itG~~i~vDGG~sp 251 (251)
T d2c07a1 229 FLSSDKSGYINGRVFVIDGGLSP 251 (251)
T ss_dssp HHHSGGGTTCCSCEEEESTTSCC
T ss_pred HHhCchhCCCcCcEEEECCCcCc
Confidence 99999999999999999998655
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=7.6e-48 Score=315.12 Aligned_cols=221 Identities=25% Similarity=0.319 Sum_probs=203.7
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||++|||+++|++|+++| ++|++++|+.++++++.+.. ..++.++++|++|+++ ++++++++.+.++
T Consensus 7 K~alITGas~GIG~aia~~la~~G----~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~-v~~~~~~~~~~~g 79 (244)
T d1nffa_ 7 KVALVSGGARGMGASHVRAMVAEG----AKVVFGDILDEEGKAMAAEL--ADAARYVHLDVTQPAQ-WKAAVDTAVTAFG 79 (244)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHT--GGGEEEEECCTTCHHH-HHHHHHHHHHHHS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHHh--hCcceEEEeecCCHHH-HHHHHHHHHHHhC
Confidence 899999999999999999999999 99999999999888775544 3467889999999999 9999999999998
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+||||||.... .++.+++.++|++.+++|+.+++++++.++|.|.++ +.|+||++||..+..+
T Consensus 80 --~idilinnAG~~~~-~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-----------~~G~Ii~isS~~~~~~ 145 (244)
T d1nffa_ 80 --GLHVLVNNAGILNI-GTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEA-----------GRGSIINISSIEGLAG 145 (244)
T ss_dssp --CCCEEEECCCCCCC-BCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----------TCEEEEEECCGGGTSC
T ss_pred --CCeEEEECCcccCC-CchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhc-----------CcceEEeccccccccc
Confidence 69999999998775 889999999999999999999999999999999987 6899999999999887
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC----------CCchhhHHHHHHHHhhhc
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA----------PLEVGAATAGIIQFIQSL 231 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~----------~~~~~~~~~~~~~~~~~~ 231 (248)
. +++..|+++|+++.+|+++|+.||+++|||||+|+||+++|+|..... ..+|+|+++.+.+++++.
T Consensus 146 ~---~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~pl~R~~~p~diA~~v~fL~s~~ 222 (244)
T d1nffa_ 146 T---VACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPEDIFQTALGRAAEPVEVSNLVVYLASDE 222 (244)
T ss_dssp C---TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCTTCSCCSSSSCBCHHHHHHHHHHHHSGG
T ss_pred c---ccccchhhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhhhHHHHhccccCCCCHHHHHHHHHHHhChh
Confidence 7 888999999999999999999999999999999999999999975432 358999999999999998
Q ss_pred ccccccceeeeCCee
Q psy11190 232 GEAHNGGFFEYTGKA 246 (248)
Q Consensus 232 ~~~~~g~~~~~~g~~ 246 (248)
+...||+.+.+||..
T Consensus 223 s~~itG~~i~vDGG~ 237 (244)
T d1nffa_ 223 SSYSTGAEFVVDGGT 237 (244)
T ss_dssp GTTCCSCEEEESTTG
T ss_pred hCCCcCCEEEECCCe
Confidence 899999999999864
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=100.00 E-value=3.3e-48 Score=319.81 Aligned_cols=226 Identities=23% Similarity=0.284 Sum_probs=204.5
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHH-HHHhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELL-ALAQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
+|++|||||++|||+++|++|+++| ++|++++|++++++++. ++...+.++.++++|++|.++ ++.+++++.+.
T Consensus 1 KKValITGas~GIG~aia~~la~~G----a~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~-v~~~~~~~~~~ 75 (255)
T d1gega_ 1 KKVALVTGAGQGIGKAIALRLVKDG----FAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQ-VFAAVEQARKT 75 (255)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHH-HHHHHHHHHHH
T ss_pred CCEEEEcCCccHHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHH-HHHHHHHHHHH
Confidence 5889999999999999999999999 99999999999999884 444456689999999999999 99999999999
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
+| ++|+||||||+... .++.+++.++|++.+++|+.++++++++++|.|.+++ ..++|+++||.++.
T Consensus 76 ~g--~iDilVnnAG~~~~-~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~----------~~g~Iv~isS~~~~ 142 (255)
T d1gega_ 76 LG--GFDVIVNNAGVAPS-TPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEG----------HGGKIINACSQAGH 142 (255)
T ss_dssp TT--CCCEEEECCCCCCC-BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT----------SCEEEEEECCGGGT
T ss_pred hC--CccEEEeccccccc-CcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhc----------cccccccccchhhc
Confidence 98 69999999998765 8899999999999999999999999999999887763 46889999999998
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC--------------------------C
Q psy11190 160 IEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN--------------------------A 213 (248)
Q Consensus 160 ~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~--------------------------~ 213 (248)
.+. ++...|+++|+|+.+|+++|+.|++++|||||+|+||+++|+|+... .
T Consensus 143 ~~~---~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R 219 (255)
T d1gega_ 143 VGN---PELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGR 219 (255)
T ss_dssp SCC---TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCS
T ss_pred ccC---cccccchhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccChHHhhhhhhhHhhhcccchhHHHHHHhcCCCCC
Confidence 777 88899999999999999999999999999999999999999874220 1
Q ss_pred CCchhhHHHHHHHHhhhcccccccceeeeCCeec
Q psy11190 214 PLEVGAATAGIIQFIQSLGEAHNGGFFEYTGKAI 247 (248)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~ 247 (248)
..+|+|++..+++++++.+...||+.+.+||..+
T Consensus 220 ~~~peevA~~v~fL~S~~a~~itG~~i~vDGG~~ 253 (255)
T d1gega_ 220 LSEPEDVAACVSYLASPDSDYMTGQSLLIDGGMV 253 (255)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSS
T ss_pred CcCHHHHHHHHHHHhCchhCCccCcEEEecCCEE
Confidence 3579999999999999989999999999999754
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.4e-47 Score=315.75 Aligned_cols=223 Identities=20% Similarity=0.258 Sum_probs=203.5
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHH-HHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELL-ALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|++|||||++|||+++|++|+++| ++|++++|+.++++++. ++...++++.++++|++++++ ++++++++.+.+
T Consensus 12 K~alITGas~GIG~aia~~la~~G----a~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~-~~~~~~~~~~~~ 86 (255)
T d1fmca_ 12 KCAIITGAGAGIGKEIAITFATAG----ASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQE-LSALADFAISKL 86 (255)
T ss_dssp CEEEETTTTSHHHHHHHHHHHTTT----CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH-HHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHH-HHHHHHHHHHHc
Confidence 799999999999999999999999 99999999999999884 444456689999999999999 999999999999
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
| ++|+||||||+..+ .++ +++.++|++.+++|+.+++++++.++|.|.++ +.++||++||.++..
T Consensus 87 g--~iDilvnnAG~~~~-~~~-e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~-----------~~g~Ii~isS~~~~~ 151 (255)
T d1fmca_ 87 G--KVDILVNNAGGGGP-KPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKN-----------GGGVILTITSMAAEN 151 (255)
T ss_dssp S--SCCEEEECCCCCCC-CCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----------TCEEEEEECCGGGTC
T ss_pred C--CCCEeeeCCcCCCC-Ccc-cCCHHHHHHHHHHHHHHhhhhHHHHHhhhccc-----------cccccccccccchhc
Confidence 8 59999999998765 555 68999999999999999999999999999987 678999999999988
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC----------------CCchhhHHHHH
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA----------------PLEVGAATAGI 224 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~----------------~~~~~~~~~~~ 224 (248)
+. +++..|+++|+|+.+|+++||.|++++|||||+|+||+++|++.+... ..+|+|++..+
T Consensus 152 ~~---~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~e~~~~~~~~~pl~R~g~pedvA~~v 228 (255)
T d1fmca_ 152 KN---INMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAA 228 (255)
T ss_dssp CC---TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCSSCSCBCHHHHHHHH
T ss_pred cc---cccccchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence 77 888999999999999999999999999999999999999999865432 34799999999
Q ss_pred HHHhhhcccccccceeeeCCeec
Q psy11190 225 IQFIQSLGEAHNGGFFEYTGKAI 247 (248)
Q Consensus 225 ~~~~~~~~~~~~g~~~~~~g~~~ 247 (248)
.+++++.+...||+.+.+||..+
T Consensus 229 ~fL~S~~s~~itG~~i~vDGG~~ 251 (255)
T d1fmca_ 229 LFLCSPAASWVSGQILTVSGGGV 251 (255)
T ss_dssp HHHHSGGGTTCCSCEEEESTTSC
T ss_pred HHHhCchhcCCcCCEEEECcCcc
Confidence 99999989999999999999754
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=100.00 E-value=3e-47 Score=312.45 Aligned_cols=223 Identities=23% Similarity=0.261 Sum_probs=194.7
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||++|||+++|+.|+++| ++|++++|+.++..+ ..+...+.++.++++|++|+++ ++++++++.+.+|
T Consensus 6 KvalVTGas~GIG~aia~~la~~G----a~V~~~~~~~~~~~~-~~~~~~g~~~~~~~~Dvs~~~~-v~~~~~~~~~~~G 79 (247)
T d2ew8a1 6 KLAVITGGANGIGRAIAERFAVEG----ADIAIADLVPAPEAE-AAIRNLGRRVLTVKCDVSQPGD-VEAFGKQVISTFG 79 (247)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT----CEEEEEESSCCHHHH-HHHHHTTCCEEEEECCTTCHHH-HHHHHHHHHHHHS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC----CEEEEEECCchHHHH-HHHHHcCCcEEEEEeeCCCHHH-HHHHHHHHHHHcC
Confidence 799999999999999999999999 899999998754222 2233345689999999999999 9999999999998
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+||||||+... .++.+++.++|++.+++|+.+++++++.++|.|+++ +.|+||++||.++..+
T Consensus 80 --~iDilVnnAG~~~~-~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~-----------~~G~Iv~isS~~~~~~ 145 (247)
T d2ew8a1 80 --RCDILVNNAGIYPL-IPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRN-----------GWGRIINLTSTTYWLK 145 (247)
T ss_dssp --CCCEEEECCCCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----------TCEEEEEECCGGGGSC
T ss_pred --CCCEEEECCCCCCC-CChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhc-----------CCCCccccccchhccc
Confidence 69999999998765 888999999999999999999999999999999987 6899999999999887
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC-----------------CCchhhHHHHH
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA-----------------PLEVGAATAGI 224 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~-----------------~~~~~~~~~~~ 224 (248)
. ++...|+++|+|+.+|+++|+.|++++|||||+|+||+++|+|..... ..+|+|++..+
T Consensus 146 ~---~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~l~r~~~pedvA~~v 222 (247)
T d2ew8a1 146 I---EAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAA 222 (247)
T ss_dssp C---SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC------------------CTTSSSCSCCCTHHHHHHH
T ss_pred C---cccccchhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCccccccccchhHHHHHHHhccCCCCCCHHHHHHHH
Confidence 7 888999999999999999999999999999999999999999865421 24799999999
Q ss_pred HHHhhhcccccccceeeeCCeec
Q psy11190 225 IQFIQSLGEAHNGGFFEYTGKAI 247 (248)
Q Consensus 225 ~~~~~~~~~~~~g~~~~~~g~~~ 247 (248)
++++++.+...||+.+.+||..+
T Consensus 223 ~fL~S~~s~~itG~~i~vDGG~~ 245 (247)
T d2ew8a1 223 AFLASDDASFITGQTLAVDGGMV 245 (247)
T ss_dssp HHHTSGGGTTCCSCEEEESSSCC
T ss_pred HHHhCchhcCCcCCeEEECCCEe
Confidence 99999988999999999999754
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=5.8e-48 Score=315.94 Aligned_cols=221 Identities=24% Similarity=0.368 Sum_probs=203.2
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||++|||+++|+.|+++| ++|++++|++++++++.+.. +.+...+++|++|.++ ++++++++.+.+|
T Consensus 5 K~alITGas~GIG~a~a~~l~~~G----~~Vv~~~r~~~~l~~~~~~~--~~~~~~~~~Dv~~~~~-v~~~~~~~~~~~g 77 (243)
T d1q7ba_ 5 KIALVTGASRGIGRAIAETLAARG----AKVIGTATSENGAQAISDYL--GANGKGLMLNVTDPAS-IESVLEKIRAEFG 77 (243)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTT----CEEEEEESSHHHHHHHHHHH--GGGEEEEECCTTCHHH-HHHHHHHHHHHTC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcC----CEEEEEeCCHHHHHHHHHHh--CCCCcEEEEEecCHHH-hhhhhhhhhcccC
Confidence 899999999999999999999999 99999999999988886554 3467889999999999 9999999999998
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|.++ +.|+||++||.++..+
T Consensus 78 --~iDilVnnAg~~~~-~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-----------~~G~II~isS~~~~~~ 143 (243)
T d1q7ba_ 78 --EVDILVNNAGITRD-NLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKK-----------RHGRIITIGSVVGTMG 143 (243)
T ss_dssp --SCSEEEECCCCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----------TCEEEEEECCHHHHHC
T ss_pred --Ccceehhhhhhccc-cccccccccccccccceeechhhhhHHHHHHHHHHc-----------CCCEeeeecchhhcCC
Confidence 69999999998776 888899999999999999999999999999999987 6799999999999887
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC---------------CCchhhHHHHHHH
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA---------------PLEVGAATAGIIQ 226 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~---------------~~~~~~~~~~~~~ 226 (248)
. ++...|+++|+|+.+|+++|+.|++++|||||+|+||+++|+|.+... ..+|+|++..+.+
T Consensus 144 ~---~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~f 220 (243)
T d1q7ba_ 144 N---GGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQRAGILAQVPAGRLGGAQEIANAVAF 220 (243)
T ss_dssp C---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHTTCTTSSCBCHHHHHHHHHH
T ss_pred C---CCCHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecceEechhhhhhhhhHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence 7 888999999999999999999999999999999999999999865432 3489999999999
Q ss_pred HhhhcccccccceeeeCCee
Q psy11190 227 FIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 227 ~~~~~~~~~~g~~~~~~g~~ 246 (248)
++++.+...||+.+.+||..
T Consensus 221 L~S~~s~~itGq~i~vdGG~ 240 (243)
T d1q7ba_ 221 LASDEAAYITGETLHVNGGM 240 (243)
T ss_dssp HHSGGGTTCCSCEEEESTTS
T ss_pred HhCchhcCCcCCeEEECCCe
Confidence 99998899999999999963
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=4.7e-47 Score=313.31 Aligned_cols=224 Identities=23% Similarity=0.288 Sum_probs=185.8
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHH-HHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELL-ALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|++|||||++|||+++|++|+++| ++|++++|+.++++++. ++.....++.++.+|+++.++ ++++++++.+.+
T Consensus 9 K~alVTGas~GIG~aiA~~la~~G----a~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~-v~~~~~~~~~~~ 83 (259)
T d1xq1a_ 9 KTVLVTGGTKGIGHAIVEEFAGFG----AVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPE-REKLMQTVSSMF 83 (259)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHH-HHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHH-HHHHHHHHHHHh
Confidence 799999999999999999999999 89999999999998884 444456689999999999999 999999999988
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+ +++|+||||||...+ .++.+.+.++|++.+++|+.+++++++.++|.|+++ +.|+||++||..+..
T Consensus 84 ~-g~idilvnnAG~~~~-~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~-----------~~G~Iv~isS~~~~~ 150 (259)
T d1xq1a_ 84 G-GKLDILINNLGAIRS-KPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKAS-----------GCGNIIFMSSIAGVV 150 (259)
T ss_dssp T-TCCSEEEEECCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------SSCEEEEEC------
T ss_pred C-CCcccccccccccCC-CchhhCCHHHHHHHHHHHhhhheeeehhhhhccccc-----------ccccccccccccccc
Confidence 4 259999999998876 888999999999999999999999999999999987 689999999999998
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC----------------CCchhhHHHHH
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA----------------PLEVGAATAGI 224 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~----------------~~~~~~~~~~~ 224 (248)
+. ++...|+++|+|+.+|+++|+.|++++|||||+|+||+++|+|..... ..+|+|++..+
T Consensus 151 ~~---~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v 227 (259)
T d1xq1a_ 151 SA---SVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFKKVVISRKPLGRFGEPEEVSSLV 227 (259)
T ss_dssp -------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC-------------------------CCGGGGHHHH
T ss_pred cc---cccccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhchHHHHHHHHhCCCCCCCcCHHHHHHHH
Confidence 87 788899999999999999999999999999999999999999875422 24799999999
Q ss_pred HHHhhhcccccccceeeeCCee
Q psy11190 225 IQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 225 ~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
++++++.+...||+.+.+||..
T Consensus 228 ~fL~S~~s~~iTG~~i~vDGG~ 249 (259)
T d1xq1a_ 228 AFLCMPAASYITGQTICVDGGL 249 (259)
T ss_dssp HHHTSGGGTTCCSCEEECCCCE
T ss_pred HHHhCchhcCCcCcEEEeCCCE
Confidence 9999998999999999999963
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=100.00 E-value=1.3e-47 Score=316.52 Aligned_cols=223 Identities=18% Similarity=0.214 Sum_probs=202.3
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHH-HHhh--cCCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQ--HSNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~-~~~~--~~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
|++|||||++|||+++|+.|+++| ++|++++|+.++++++.+ +... +.++.++++|++|+++ ++++++++.+
T Consensus 5 K~alITGas~GIG~aia~~la~~G----a~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~-v~~~~~~~~~ 79 (258)
T d1iy8a_ 5 RVVLITGGGSGLGRATAVRLAAEG----AKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQ-VEAYVTATTE 79 (258)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHH-HHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHH-HHHHHHHHHH
Confidence 899999999999999999999999 999999999999888743 3333 3478899999999999 9999999999
Q ss_pred hhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 79 VVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
.+| ++|+||||||+..+..++.+++.++|++.+++|+.++++++++++|.|+++ +.|+||++||.++
T Consensus 80 ~~G--~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~-----------~~G~Ii~isS~~~ 146 (258)
T d1iy8a_ 80 RFG--RIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQ-----------GSGMVVNTASVGG 146 (258)
T ss_dssp HHS--CCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----------TCCEEEEECCGGG
T ss_pred HhC--CCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhh-----------cCCCCcccccHhh
Confidence 998 699999999987655788899999999999999999999999999999987 6899999999999
Q ss_pred cccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC-----------------------CCC
Q psy11190 159 SIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN-----------------------APL 215 (248)
Q Consensus 159 ~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~-----------------------~~~ 215 (248)
..+. ++...|+++|+|+.+|+++|+.|++++|||||+|+||+++|||.... ...
T Consensus 147 ~~~~---~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~ 223 (258)
T d1iy8a_ 147 IRGI---GNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYG 223 (258)
T ss_dssp TSBC---SSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCB
T ss_pred ccCC---CCchHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCCCCCCc
Confidence 8877 88999999999999999999999999999999999999999874211 134
Q ss_pred chhhHHHHHHHHhhhcccccccceeeeCCe
Q psy11190 216 EVGAATAGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
+|+|++..+++++++.+...||+.+.+||.
T Consensus 224 ~p~dvA~~v~fL~S~~s~~itG~~i~VDGG 253 (258)
T d1iy8a_ 224 EAPEIAAVVAFLLSDDASYVNATVVPIDGG 253 (258)
T ss_dssp CHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred CHHHHHHHHHHHhCchhcCCcCceEEcCcc
Confidence 899999999999999899999999999995
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=100.00 E-value=5.8e-47 Score=309.43 Aligned_cols=223 Identities=18% Similarity=0.227 Sum_probs=199.4
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCce-------EEEeecCchhHHHHH-HHHhhcCCceeEEeeccCCchhhhhH
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAH-------IFATCRNKDKAVELL-ALAQQHSNLHVIELDVTDFSKQQDVL 72 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~-------V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~~v~~~ 72 (248)
++++|||||++|||+++|++|+++| ++ |++++|+.++++++. ++...+.++.++++|++|.++ ++++
T Consensus 1 K~VvlITGas~GIG~aia~~la~~G----~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~-v~~~ 75 (240)
T d2bd0a1 1 KHILLITGAGKGIGRAIALEFARAA----RHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMAD-VRRL 75 (240)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHT----TTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHH-HHHH
T ss_pred CCEEEEccCCCHHHHHHHHHHHHhC----ccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHH-HHHH
Confidence 3579999999999999999999999 55 999999999998885 444445678899999999999 9999
Q ss_pred HHHhhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEE
Q psy11190 73 FKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVN 152 (248)
Q Consensus 73 ~~~i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~ 152 (248)
++++.+.+| ++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|+++ +.|+||+
T Consensus 76 ~~~~~~~~g--~iDilvnnAg~~~~-~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~-----------~~G~Ii~ 141 (240)
T d2bd0a1 76 TTHIVERYG--HIDCLVNNAGVGRF-GALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQ-----------HSGHIFF 141 (240)
T ss_dssp HHHHHHHTS--CCSEEEECCCCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----------TCEEEEE
T ss_pred HHHHHHHcC--CcceeecccccccC-CccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhc-----------CCCceEE
Confidence 999999998 59999999998875 889999999999999999999999999999999987 6899999
Q ss_pred eecCCCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC------CCchhhHHHHHHH
Q psy11190 153 VSSIMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA------PLEVGAATAGIIQ 226 (248)
Q Consensus 153 vss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~------~~~~~~~~~~~~~ 226 (248)
+||.++..+. +++..|+++|+|+.+|+++|+.|++++|||||+|+||+++|+|+.... ..+|+++++.+++
T Consensus 142 isS~~~~~~~---~~~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~PedvA~~v~~ 218 (240)
T d2bd0a1 142 ITSVAATKAF---RHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDEMQALMMMPEDIAAPVVQ 218 (240)
T ss_dssp ECCGGGTSCC---TTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCSTTGGGSBCHHHHHHHHHH
T ss_pred EechhhcCCC---CCChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhhcCHhhHhcCCCHHHHHHHHHH
Confidence 9999999887 888999999999999999999999999999999999999999986643 4679999999999
Q ss_pred Hhhhcccccccc-eeeeCCe
Q psy11190 227 FIQSLGEAHNGG-FFEYTGK 245 (248)
Q Consensus 227 ~~~~~~~~~~g~-~~~~~g~ 245 (248)
++++++...+++ .+..+|.
T Consensus 219 l~s~~~~~~~~~~~i~p~~G 238 (240)
T d2bd0a1 219 AYLQPSRTVVEEIILRPTSG 238 (240)
T ss_dssp HHTSCTTEEEEEEEEEETTC
T ss_pred HHcCCccCccCCEEEEecCC
Confidence 999877765555 4545543
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=100.00 E-value=6.1e-47 Score=313.08 Aligned_cols=222 Identities=23% Similarity=0.309 Sum_probs=197.4
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCc-hhHHHHHH-HHhh-cCCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNK-DKAVELLA-LAQQ-HSNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~-~~~~~~~~-~~~~-~~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
|++|||||++|||+++|++|+++| ++|++.+|+. +.++++.+ +... +.++.++++|++|.++ ++.+++++.+
T Consensus 5 K~alITGas~GIG~aiA~~la~~G----a~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~-v~~~~~~~~~ 79 (260)
T d1x1ta1 5 KVAVVTGSTSGIGLGIATALAAQG----ADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEA-VRGLVDNAVR 79 (260)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTT----CEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHH-HHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC----CEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHH-HHHHHHHHHH
Confidence 799999999999999999999999 9999999974 45666643 3332 4588999999999999 9999999999
Q ss_pred hhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 79 VVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
.+| ++|+||||||.... .++.+.+.++|++.+++|+.++++++++++|.|+++ +.|+||++||.++
T Consensus 80 ~~G--~iDiLVnnAG~~~~-~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~-----------~~G~Iv~isS~~~ 145 (260)
T d1x1ta1 80 QMG--RIDILVNNAGIQHT-ALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQ-----------GFGRIINIASAHG 145 (260)
T ss_dssp HHS--CCSEEEECCCCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----------TCEEEEEECCGGG
T ss_pred HhC--CCcEEEeecccccC-CchhhhhHHhhhhhhhccccccccccchhhhhHhhc-----------CCceEeecccccc
Confidence 998 69999999998776 888999999999999999999999999999999987 6799999999999
Q ss_pred cccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC-------------------------
Q psy11190 159 SIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA------------------------- 213 (248)
Q Consensus 159 ~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~------------------------- 213 (248)
..+. +++..|+++|+++.+|+++|+.|++++|||||+|+||+++|+|.....
T Consensus 146 ~~~~---~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl 222 (260)
T d1x1ta1 146 LVAS---ANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPS 222 (260)
T ss_dssp TSCC---TTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTT
T ss_pred eecc---CCcchhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHHHhcCCC
Confidence 9887 888999999999999999999999999999999999999999864321
Q ss_pred --CCchhhHHHHHHHHhhhcccccccceeeeCCe
Q psy11190 214 --PLEVGAATAGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 214 --~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
..+|+|++..+++++++.+...+|+.+.+||.
T Consensus 223 ~R~g~pediA~~v~fL~S~~a~~itG~~i~vDGG 256 (260)
T d1x1ta1 223 LQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGG 256 (260)
T ss_dssp CCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CCCcCHHHHHHHHHHHhChhhCCCcCCEEEECcc
Confidence 24799999999999999999999999999996
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=100.00 E-value=4e-47 Score=312.44 Aligned_cols=223 Identities=24% Similarity=0.318 Sum_probs=203.7
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||++|||+++|++|+++| ++|++++|+.+.++++.+.....+++.++++|++|+++ ++++++++.+.+|
T Consensus 7 K~alVTGas~GIG~aia~~la~~G----a~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-v~~~~~~~~~~~G 81 (251)
T d1zk4a1 7 KVAIITGGTLGIGLAIATKFVEEG----AKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDG-WTKLFDATEKAFG 81 (251)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHH-HHHHHHHHHHHHS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHH-HHHHHHHHHHHhC
Confidence 899999999999999999999999 89999999999988887666666789999999999999 9999999999998
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+||||||.... .++.+++.++|++.+++|+.+++++++.++|.|.+++ ..++||++||.++..+
T Consensus 82 --~iDiLVnnAg~~~~-~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~----------~gg~Ii~isS~~~~~~ 148 (251)
T d1zk4a1 82 --PVSTLVNNAGIAVN-KSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKG----------LGASIINMSSIEGFVG 148 (251)
T ss_dssp --SCCEEEECCCCCCC-CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS----------SCEEEEEECCGGGTSC
T ss_pred --CceEEEeccccccc-cchhcccccchhhhccccccccchhHHHHHHHHHhcC----------CCCceEeeeccceecc
Confidence 69999999998876 8899999999999999999999999999999998862 2468999999999887
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhh--ccCCCeEEEEecCcceecCCCCCCC----------------CCchhhHHHH
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSID--LKGDKIIATAMHPGWVKTDMGGSNA----------------PLEVGAATAG 223 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e--~~~~~i~v~~v~PG~v~t~~~~~~~----------------~~~~~~~~~~ 223 (248)
. ++...|+++|+++.+|+++++.| ++++|||||+|+||+++|+|..... ..+|+|++..
T Consensus 149 ~---~~~~~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~ 225 (251)
T d1zk4a1 149 D---PSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIAYI 225 (251)
T ss_dssp C---TTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHHHHHTSTTTCTTSSCBCHHHHHHH
T ss_pred C---CCchhHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCCHHHHHHHHhCCCCCCCcCHHHHHHH
Confidence 7 88899999999999999999998 5689999999999999999864432 2479999999
Q ss_pred HHHHhhhcccccccceeeeCCe
Q psy11190 224 IIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 224 ~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
+.+++++.+...+|+.+.+||.
T Consensus 226 v~fL~S~~s~~itG~~i~vDGG 247 (251)
T d1zk4a1 226 CVYLASNESKFATGSEFVVDGG 247 (251)
T ss_dssp HHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHhCchhCCCcCcEEEECcc
Confidence 9999999899999999999996
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=100.00 E-value=2.9e-47 Score=314.51 Aligned_cols=223 Identities=24% Similarity=0.280 Sum_probs=202.3
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHH-HHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELL-ALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|++|||||++|||+++|++|+++| ++|++++|++++++++. ++...+.++.++++|++|+++ ++.+++++.+.+
T Consensus 3 KValITGas~GIG~aia~~la~~G----a~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~-v~~~~~~~~~~~ 77 (257)
T d2rhca1 3 EVALVTGATSGIGLEIARRLGKEG----LRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPE-IEALVAAVVERY 77 (257)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH-HHHHHHHHHHHT
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHH-HHHHHHHHHHHh
Confidence 899999999999999999999999 89999999999999884 444445689999999999999 999999999999
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHH--HhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLL--KKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l--~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
| ++|+||||||+... .++.+++.++|++.+++|+.++++++++++|.| .++ +.|+||+++|..+
T Consensus 78 g--~iDilVnnAG~~~~-~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~-----------~~g~Ii~i~S~~~ 143 (257)
T d2rhca1 78 G--PVDVLVNNAGRPGG-GATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLER-----------GTGRIVNIASTGG 143 (257)
T ss_dssp C--SCSEEEECCCCCCC-SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHH-----------TEEEEEEECCGGG
T ss_pred C--CCCEEEecccccCC-CChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhc-----------CCccccccccccc
Confidence 8 59999999998775 888899999999999999999999999999974 443 5789999999999
Q ss_pred cccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC--------------------------
Q psy11190 159 SIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN-------------------------- 212 (248)
Q Consensus 159 ~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~-------------------------- 212 (248)
..+. +++..|+++|+|+.+|+++|+.|++++|||||+|+||+++|+|....
T Consensus 144 ~~~~---~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~Plg 220 (257)
T d2rhca1 144 KQGV---VHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIG 220 (257)
T ss_dssp TSCC---TTCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSTTS
T ss_pred cccc---ccchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCCCC
Confidence 8887 88999999999999999999999999999999999999999874221
Q ss_pred CCCchhhHHHHHHHHhhhcccccccceeeeCCee
Q psy11190 213 APLEVGAATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
...+|+|++..+++++++.+...||+.+.+||..
T Consensus 221 R~~~pedia~~v~fL~S~~s~~itG~~i~vDGG~ 254 (257)
T d2rhca1 221 RYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGGL 254 (257)
T ss_dssp SCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred CCcCHHHHHHHHHHHhCchhcCCcCceEEECcCc
Confidence 1357999999999999998999999999999964
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=4.3e-47 Score=312.18 Aligned_cols=223 Identities=20% Similarity=0.316 Sum_probs=200.8
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHH-HHHhh-cCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELL-ALAQQ-HSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~-~~~~~-~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|++|||||++|||+++|+.|+++| ++|++++|+.++++++. ++.+. +.++.++++|++++++ ++++++++.+.
T Consensus 6 K~~lITGas~GIG~aia~~la~~G----a~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~-v~~~~~~~~~~ 80 (251)
T d1vl8a_ 6 RVALVTGGSRGLGFGIAQGLAEAG----CSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEE-VKKLLEAVKEK 80 (251)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHH-HHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHH-HHHHHHHHHHH
Confidence 899999999999999999999999 99999999999888774 44433 4578899999999999 99999999999
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
+| ++|+||||||.... .++.+++.++|++.+++|+.+++++++.++|.|.++ +.|+||+++|..+.
T Consensus 81 ~g--~iDiLVnnAG~~~~-~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~-----------~~G~Ii~i~S~~~~ 146 (251)
T d1vl8a_ 81 FG--KLDTVVNAAGINRR-HPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRES-----------DNPSIINIGSLTVE 146 (251)
T ss_dssp HS--CCCEEEECCCCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTC-----------SSCEEEEECCGGGT
T ss_pred cC--CCCEEEECCCCCCC-CChhhCCHHHHHHHHHhhhhhhhhhhhhhhhccccc-----------ccccccccccchhc
Confidence 98 59999999998765 889999999999999999999999999999999886 68999999997764
Q ss_pred c-cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC-----------------CCCchhhHH
Q psy11190 160 I-EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN-----------------APLEVGAAT 221 (248)
Q Consensus 160 ~-~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~-----------------~~~~~~~~~ 221 (248)
. +. +++..|+++|+|+.+|+++|+.|++++|||||+|+||+++|+|.+.. ...+|+|++
T Consensus 147 ~~~~---~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA 223 (251)
T d1vl8a_ 147 EVTM---PNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLK 223 (251)
T ss_dssp CCCS---SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTSSCBCGGGGH
T ss_pred cccC---ccccchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCCHHHHHHHHhcCCCCCCCCHHHHH
Confidence 4 44 67789999999999999999999999999999999999999996531 134799999
Q ss_pred HHHHHHhhhcccccccceeeeCCee
Q psy11190 222 AGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 222 ~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
+.+++++++.....+|+.+.+||..
T Consensus 224 ~~v~fL~S~~a~~itG~~i~vDGG~ 248 (251)
T d1vl8a_ 224 GVAVFLASEEAKYVTGQIIFVDGGW 248 (251)
T ss_dssp HHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHHHhCchhCCCcCcEEEeCcCe
Confidence 9999999998999999999999963
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=100.00 E-value=4e-47 Score=313.85 Aligned_cols=224 Identities=24% Similarity=0.319 Sum_probs=203.3
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHH-HHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELL-ALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|++|||||++|||+++|++|+++| ++|++++|+.++++++. ++...+.++.++++|++|+++ ++++++++.+.+
T Consensus 9 K~alITGas~GIG~aia~~la~~G----a~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~-v~~~~~~~~~~~ 83 (259)
T d2ae2a_ 9 CTALVTGGSRGIGYGIVEELASLG----ASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSE-RQELMNTVANHF 83 (259)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHH-HHHHHHHHHHHT
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHH-HHHHHHHHHHHh
Confidence 799999999999999999999999 89999999999998884 444445678899999999999 999999998887
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+ +++|+||||||+... .++.+.+.++|++.+++|+.+++++++.++|.|.++ +.|+||+++|..+..
T Consensus 84 ~-~~idilvnnAG~~~~-~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~-----------~~G~Ii~isS~~~~~ 150 (259)
T d2ae2a_ 84 H-GKLNILVNNAGIVIY-KEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKAS-----------ERGNVVFISSVSGAL 150 (259)
T ss_dssp T-TCCCEEEECCCCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----------SSEEEEEECCGGGTS
T ss_pred C-CCceEEEECCceecc-CccccCCHHHHHHHHhcccceeEEEEeeccchhhhh-----------ccccccccccccccc
Confidence 6 259999999998765 788899999999999999999999999999999986 689999999999988
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC--------------------CCCchhhH
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN--------------------APLEVGAA 220 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~--------------------~~~~~~~~ 220 (248)
+. ++...|+++|+++.+|+++|+.||+++|||||+|+||+++|+|.+.. ...+|+|+
T Consensus 151 ~~---~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~pedv 227 (259)
T d2ae2a_ 151 AV---PYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKEL 227 (259)
T ss_dssp CC---TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHHHH
T ss_pred cc---ccccchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCCCCCCcCHHHH
Confidence 77 88899999999999999999999999999999999999999974321 13579999
Q ss_pred HHHHHHHhhhcccccccceeeeCCee
Q psy11190 221 TAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 221 ~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
+..+++++++.+...||+.+.+||..
T Consensus 228 A~~v~fL~S~~s~~itG~~i~VDGG~ 253 (259)
T d2ae2a_ 228 AAMVAFLCFPAASYVTGQIIYVDGGL 253 (259)
T ss_dssp HHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHHHHhCchhCCCcCcEEEECCCe
Confidence 99999999998999999999999964
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=100.00 E-value=3.6e-47 Score=311.44 Aligned_cols=223 Identities=21% Similarity=0.291 Sum_probs=200.6
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEe-ecCchhHHHHHHH-HhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFAT-CRNKDKAVELLAL-AQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~-~r~~~~~~~~~~~-~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
+++|||||++|||+++|++|+++| ++|++. .|+.+.++++.+. ...+.++.++++|++|.++ ++++++++.+.
T Consensus 2 pV~lITGas~GIG~a~a~~la~~G----a~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~-v~~~~~~~~~~ 76 (244)
T d1edoa_ 2 PVVVVTGASRGIGKAIALSLGKAG----CKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEAD-VEAMMKTAIDA 76 (244)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTT----CEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHH-HHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC----CEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHH-HHHHHHHHHHH
Confidence 689999999999999999999999 899886 5566677777444 4445688999999999999 99999999999
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
+| ++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|.++ +.|+||++||.++.
T Consensus 77 ~g--~iDiLVnnAg~~~~-~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-----------~~G~IVnisS~~~~ 142 (244)
T d1edoa_ 77 WG--TIDVVVNNAGITRD-TLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKK-----------RKGRIINIASVVGL 142 (244)
T ss_dssp SS--CCSEEEECCCCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----------TCEEEEEECCTHHH
T ss_pred cC--CCCccccccccccc-cchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHc-----------CCcEEEEEcChhhc
Confidence 98 69999999998876 888999999999999999999999999999999987 68999999999999
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC---------------CCchhhHHHHH
Q psy11190 160 IEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA---------------PLEVGAATAGI 224 (248)
Q Consensus 160 ~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~---------------~~~~~~~~~~~ 224 (248)
.+. ++...|+++|+|+.+|+++|+.||+++|||||+|+||+++|+|.+... ..+|+|+++.+
T Consensus 143 ~~~---~~~~~Y~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~R~~~p~dvA~~v 219 (244)
T d1edoa_ 143 IGN---IGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKKILGTIPLGRTGQPENVAGLV 219 (244)
T ss_dssp HCC---TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCHHHHHHHHTSCTTCSCBCHHHHHHHH
T ss_pred CCC---CCCHHHHHHHHHHHHChHHHHHHHhhhCcEEEEEecceeccHHHHHhhHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence 887 888999999999999999999999999999999999999999865432 35899999999
Q ss_pred HHHh-hhcccccccceeeeCCee
Q psy11190 225 IQFI-QSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 225 ~~~~-~~~~~~~~g~~~~~~g~~ 246 (248)
.++. ++.+...||+.+.+||..
T Consensus 220 ~fLa~S~~a~~itG~~i~vdGG~ 242 (244)
T d1edoa_ 220 EFLALSPAASYITGQAFTIDGGI 242 (244)
T ss_dssp HHHHHCSGGGGCCSCEEEESTTT
T ss_pred HHHHCCchhcCCcCCeEEeCCCe
Confidence 9985 777889999999999963
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=100.00 E-value=1.1e-46 Score=311.48 Aligned_cols=223 Identities=19% Similarity=0.208 Sum_probs=203.1
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHH-HHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|++|||||++|||+++|+.|+++| ++|++++|+.++++++.+ +...+.++.++++|++|.++ ++++++++.+.+
T Consensus 6 K~alITGas~GIG~aia~~la~~G----a~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~-v~~~~~~~~~~~ 80 (260)
T d1zema1 6 KVCLVTGAGGNIGLATALRLAEEG----TAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEA-VIGTVDSVVRDF 80 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHH-HHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHH-HHHHHHHHHHHh
Confidence 799999999999999999999999 899999999999988854 44445689999999999999 999999999999
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
| ++|+||||||...+..++.+++.++|++.+++|+.++++++++++|.|.++ +.|+||++||.++..
T Consensus 81 g--~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~-----------~~G~II~isS~~~~~ 147 (260)
T d1zema1 81 G--KIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQ-----------NYGRIVNTASMAGVK 147 (260)
T ss_dssp S--CCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----------TCEEEEEECCHHHHS
T ss_pred C--CCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhh-----------cCCCCCeeechhhcc
Confidence 8 699999999987665788999999999999999999999999999999886 689999999999988
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC-----------------------------
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS----------------------------- 211 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~----------------------------- 211 (248)
+. +++..|+++|+|+.+|+++|+.|++++|||||+|+||+++|+|...
T Consensus 148 ~~---~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (260)
T d1zema1 148 GP---PNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSV 224 (260)
T ss_dssp CC---TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTS
T ss_pred CC---cchHHHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhcC
Confidence 77 8889999999999999999999999999999999999999986311
Q ss_pred --CCCCchhhHHHHHHHHhhhcccccccceeeeCCe
Q psy11190 212 --NAPLEVGAATAGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 212 --~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
....+|+|++..+.+++++.+...||+.+.+||.
T Consensus 225 Pl~R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG 260 (260)
T d1zema1 225 PMRRYGDINEIPGVVAFLLGDDSSFMTGVNLPIAGG 260 (260)
T ss_dssp TTSSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred CCCCCcCHHHHHHHHHHHhCchhcCccCCeEEeCCC
Confidence 0134799999999999999999999999999984
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=100.00 E-value=1.8e-46 Score=308.54 Aligned_cols=243 Identities=39% Similarity=0.609 Sum_probs=198.9
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
+|++|||||++|||+++|++|+++|+. .+|++.+|+.++++++.+. ...++.++++|++|.++ ++.+++++.+.+
T Consensus 3 ~KtilITGassGIG~a~a~~la~~G~~--~~Vi~~~R~~~~~~~l~~~--~~~~~~~~~~Dvs~~~~-v~~~~~~i~~~~ 77 (250)
T d1yo6a1 3 PGSVVVTGANRGIGLGLVQQLVKDKNI--RHIIATARDVEKATELKSI--KDSRVHVLPLTVTCDKS-LDTFVSKVGEIV 77 (250)
T ss_dssp CSEEEESSCSSHHHHHHHHHHHTCTTC--CEEEEEESSGGGCHHHHTC--CCTTEEEEECCTTCHHH-HHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCC--CEEEEEeCCHHHHHHHHHh--hCCceEEEEEecCCHHH-HHHHHHHHHHHh
Confidence 379999999999999999999999942 4799999999988776433 24578999999999999 999999999988
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+..++|+||||||+..+..++.+.+.++|++.+++|+.|++++++.++|+|++++..+.........++++++++.....
T Consensus 78 ~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~ 157 (250)
T d1yo6a1 78 GSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSI 157 (250)
T ss_dssp GGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCS
T ss_pred CCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccc
Confidence 75469999999998766567788899999999999999999999999999998876555555555678999999877655
Q ss_pred ccc----CCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCCCCchhhHHHHHHHHhhhcccccc
Q psy11190 161 EDN----TQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQSLGEAHN 236 (248)
Q Consensus 161 ~~~----~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (248)
... +..+..+|++||+|+.+|+++|+.|++++||+||+|+||+|+|+|+......+|++.++.++..+.......+
T Consensus 158 ~~~~~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~~~~~~~~~e~~a~~~~~~~~~~~~~~s 237 (250)
T d1yo6a1 158 TDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKNAALTVEQSTAELISSFNKLDNSHN 237 (250)
T ss_dssp TTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-------------HHHHHHHHHHHTTCCGGGT
T ss_pred cCCcccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHHhcCCCCCC
Confidence 431 1133456999999999999999999999999999999999999999988899999999999999988888899
Q ss_pred cceeeeCCeecC
Q psy11190 237 GGFFEYTGKAIK 248 (248)
Q Consensus 237 g~~~~~~g~~~~ 248 (248)
|+||.+||+++|
T Consensus 238 G~f~~~~g~p~~ 249 (250)
T d1yo6a1 238 GRFFMRNLKPYE 249 (250)
T ss_dssp TCEEETTEEECC
T ss_pred eEEECCCCeeCC
Confidence 999999999986
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=100.00 E-value=3.6e-47 Score=312.84 Aligned_cols=220 Identities=24% Similarity=0.298 Sum_probs=200.3
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||++|||+++|++|+++| ++|++++|+.++++++.+.. +.++.++++|++++++ ++++++++.+.+|
T Consensus 6 K~alVTGas~GIG~aia~~la~~G----a~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~-v~~~~~~~~~~~g 78 (254)
T d1hdca_ 6 KTVIITGGARGLGAEAARQAVAAG----ARVVLADVLDEEGAATAREL--GDAARYQHLDVTIEED-WQRVVAYAREEFG 78 (254)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHTT--GGGEEEEECCTTCHHH-HHHHHHHHHHHHS
T ss_pred CEEEEeCcCCHHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHHh--CCceEEEEcccCCHHH-HHHHHHHHHHHcC
Confidence 899999999999999999999999 89999999998877764433 4578899999999999 9999999999998
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|+++ +.|+||++||.++..+
T Consensus 79 --~iDilVnnAg~~~~-~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~-----------~~G~II~isS~~~~~~ 144 (254)
T d1hdca_ 79 --SVDGLVNNAGISTG-MFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDA-----------GGGSIVNISSAAGLMG 144 (254)
T ss_dssp --CCCEEEECCCCCCC-SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----------TCEEEEEECCGGGTSC
T ss_pred --CccEEEecCccccc-cccccccccccchhhhHHhhHHHHHHHHHHHHHhhc-----------CCCeecccccchhccc
Confidence 69999999998765 888999999999999999999999999999999987 6899999999999887
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC---------------C-CchhhHHHHHH
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA---------------P-LEVGAATAGII 225 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~---------------~-~~~~~~~~~~~ 225 (248)
. ++...|+++|+|+.+|+++|+.|++++|||||+|+||+++|+|..... . .+|+|++..++
T Consensus 145 ~---~~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~pl~R~g~~PedvA~~v~ 221 (254)
T d1hdca_ 145 L---ALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEGNYPNTPMGRVGNEPGEIAGAVV 221 (254)
T ss_dssp C---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCCCSTTSCTTSTTSSCB-CHHHHHHHHH
T ss_pred c---cchhhHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCccchhcCHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence 7 888999999999999999999999999999999999999998742211 1 26999999999
Q ss_pred HHhhhcccccccceeeeCCe
Q psy11190 226 QFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 226 ~~~~~~~~~~~g~~~~~~g~ 245 (248)
+++++.+...+|+.+.+||.
T Consensus 222 fL~S~~a~~itG~~i~vDGG 241 (254)
T d1hdca_ 222 KLLSDTSSYVTGAELAVDGG 241 (254)
T ss_dssp HHHSGGGTTCCSCEEEESTT
T ss_pred HHhchhhCCCCCceEEeCCC
Confidence 99999899999999999985
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=1e-46 Score=309.28 Aligned_cols=218 Identities=24% Similarity=0.287 Sum_probs=196.4
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||++|||+++|++|+++| ++|++++|+++..+...+. ...++++|++|.++ ++++++++.+.+|
T Consensus 6 K~alITGas~GIG~aia~~la~~G----~~V~~~~~~~~~~~~~~~~-----~~~~~~~Dv~~~~~-v~~~~~~~~~~~G 75 (248)
T d2d1ya1 6 KGVLVTGGARGIGRAIAQAFAREG----ALVALCDLRPEGKEVAEAI-----GGAFFQVDLEDERE-RVRFVEEAAYALG 75 (248)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT----CEEEEEESSTTHHHHHHHH-----TCEEEECCTTCHHH-HHHHHHHHHHHHS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHc-----CCeEEEEeCCCHHH-HHHHHHHHHHhcC
Confidence 899999999999999999999999 9999999998764432222 34678999999999 9999999999998
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+||||||...+ .++.+.+.|+|++.+++|+.++++++++++|.|+++ +.|+||+++|..+..+
T Consensus 76 --~iDiLVnnAG~~~~-~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-----------~~G~Ii~isS~~~~~~ 141 (248)
T d2d1ya1 76 --RVDVLVNNAAIAAP-GSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKV-----------GGGAIVNVASVQGLFA 141 (248)
T ss_dssp --CCCEEEECCCCCCC-BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT-----------TCEEEEEECCGGGTSB
T ss_pred --CCCeEEEeCcCCCC-CChhhCCHHHHHHHHHhhhhhHhhhhhhhccccccc-----------cccccccccccccccc
Confidence 69999999998876 889999999999999999999999999999999986 6799999999999988
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC---------------------CCCchhhH
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN---------------------APLEVGAA 220 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~---------------------~~~~~~~~ 220 (248)
. ++...|+++|+|+.+|+++|+.|++++|||||+|+||+++|+|.... ...+|+|+
T Consensus 142 ~---~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedi 218 (248)
T d2d1ya1 142 E---QENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEV 218 (248)
T ss_dssp C---TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSSCBCHHHH
T ss_pred c---cccchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHHhcCCCCCCcCHHHH
Confidence 7 88999999999999999999999999999999999999999864210 02479999
Q ss_pred HHHHHHHhhhcccccccceeeeCCee
Q psy11190 221 TAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 221 ~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
+..+.+++++.+...+|+.+.+||..
T Consensus 219 a~~v~fL~S~~s~~itG~~i~vDGG~ 244 (248)
T d2d1ya1 219 AEAVLFLASEKASFITGAILPVDGGM 244 (248)
T ss_dssp HHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHHHHhCchhcCCCCcEEEcCcCc
Confidence 99999999998899999999999963
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=100.00 E-value=9.6e-46 Score=307.14 Aligned_cols=223 Identities=19% Similarity=0.195 Sum_probs=201.7
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||++|||+++|++|+++| ++|++++|+.++++++.+.+...+.+.++++|++|+++ ++++++++.+.+|
T Consensus 7 KvalITGas~GIG~aia~~la~~G----a~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~-v~~~~~~~~~~~g 81 (268)
T d2bgka1 7 KVAIITGGAGGIGETTAKLFVRYG----AKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDED-VRNLVDTTIAKHG 81 (268)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHH-HHHHHHHHHHHHS
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHH-HHHHHHHHHHHcC
Confidence 899999999999999999999999 99999999999999886666666678899999999999 9999999999998
Q ss_pred CCCccEEEeccccCCcc-ccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 82 DQGLNVLVNNAGIAAKF-TRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
++|+||||||..... ..+.+.+.++|++.+++|+.+++++++.++|.|.++ +.|+||+++|..+..
T Consensus 82 --~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~-----------~~g~ii~iss~~~~~ 148 (268)
T d2bgka1 82 --KLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPA-----------KKGSIVFTASISSFT 148 (268)
T ss_dssp --CCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGG-----------TCEEEEEECCGGGTC
T ss_pred --CcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhc-----------CCCCccccccccccc
Confidence 699999999986542 356788999999999999999999999999999986 689999999999887
Q ss_pred cccCCCCC-ccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC--------------------CCchhh
Q psy11190 161 EDNTQGGF-HPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA--------------------PLEVGA 219 (248)
Q Consensus 161 ~~~~~~~~-~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~--------------------~~~~~~ 219 (248)
+. ++. ..|+++|+|+.+|+++|+.||+++|||||+|+||+++|+|..... ..+|+|
T Consensus 149 ~~---~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~ped 225 (268)
T d2bgka1 149 AG---EGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAED 225 (268)
T ss_dssp CC---TTSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHH
T ss_pred cc---cccccccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhccccCCCCcCHHH
Confidence 65 443 479999999999999999999999999999999999999976532 357999
Q ss_pred HHHHHHHHhhhcccccccceeeeCCe
Q psy11190 220 ATAGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 220 ~~~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
+++.+++++++.+...||+.+.+||.
T Consensus 226 vA~~v~fL~S~~s~~itGq~i~VDGG 251 (268)
T d2bgka1 226 VADAVAYLAGDESKYVSGLNLVIDGG 251 (268)
T ss_dssp HHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHHHHHhChhhCCccCceEEECcC
Confidence 99999999999899999999999996
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=100.00 E-value=1.7e-46 Score=309.66 Aligned_cols=222 Identities=23% Similarity=0.248 Sum_probs=201.5
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||++|||+++|+.|+++| ++|++++|+.++++++.+.. +.++.++++|++|+++ ++++++++.+.+|
T Consensus 6 K~alVTGas~GIG~aia~~la~~G----a~V~~~~r~~~~l~~~~~~~--~~~~~~~~~Dvt~~~~-v~~~~~~~~~~~g 78 (256)
T d1k2wa_ 6 KTALITGSARGIGRAFAEAYVREG----ARVAIADINLEAARATAAEI--GPAACAIALDVTDQAS-IDRCVAELLDRWG 78 (256)
T ss_dssp EEEEEETCSSHHHHHHHHHHHHTT----EEEEEEESCHHHHHHHHHHH--CTTEEEEECCTTCHHH-HHHHHHHHHHHHS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHHh--CCceEEEEeeCCCHHH-HHHHHHHHHHHhC
Confidence 799999999999999999999999 99999999998888875444 5678899999999999 9999999999998
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+||||||+... .++.+++.++|++.+++|+.+++++++.++|.|.++. ..|+||++||..+..+
T Consensus 79 --~iDilVnnAg~~~~-~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~----------~~g~Iv~isS~~~~~~ 145 (256)
T d1k2wa_ 79 --SIDILVNNAALFDL-APIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGG----------RGGKIINMASQAGRRG 145 (256)
T ss_dssp --CCCEEEECCCCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT----------SCEEEEEECCGGGTSC
T ss_pred --CccEEEeecccccc-cccccCCHHHHHhhhceeeeccccchhhccchhHHhc----------cCCccccccchhhccc
Confidence 69999999998765 8888999999999999999999999999999876652 4799999999999987
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC--------------------------CCC
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN--------------------------APL 215 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~--------------------------~~~ 215 (248)
. ++...|+++|+|+.+|+++|+.||+++|||||+|+||+++|+|++.. ...
T Consensus 146 ~---~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~ 222 (256)
T d1k2wa_ 146 E---ALVGVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMG 222 (256)
T ss_dssp C---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCB
T ss_pred c---ccccchhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhhhhhhhhhhhccCChHHHHHHHHhcCCCCCCc
Confidence 7 88899999999999999999999999999999999999999984311 135
Q ss_pred chhhHHHHHHHHhhhcccccccceeeeCCee
Q psy11190 216 EVGAATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
+|+|++..+.+++++.+...+|+.+.+||..
T Consensus 223 ~p~evA~~v~fL~S~~a~~iTG~~i~vDGG~ 253 (256)
T d1k2wa_ 223 RAEDLTGMAIFLATPEADYIVAQTYNVDGGN 253 (256)
T ss_dssp CHHHHHHHHHHTTSGGGTTCCSCEEEESTTS
T ss_pred CHHHHHHHHHHHhCchhCCccCceEEECcch
Confidence 8999999999999998999999999999963
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=100.00 E-value=2.1e-46 Score=309.66 Aligned_cols=223 Identities=20% Similarity=0.225 Sum_probs=200.1
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCch-hHHHHHH-HHhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKD-KAVELLA-LAQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~-~~~~~~~-~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|++|||||++|||+++|++|+++| ++|++++|+.+ .++++.+ +...+.++.++++|++|+++ ++++++++.+.
T Consensus 8 K~alITGas~GIG~aia~~la~~G----~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~-v~~~~~~~~~~ 82 (261)
T d1geea_ 8 KVVVITGSSTGLGKSMAIRFATEK----AKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESD-VINLVQSAIKE 82 (261)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTT----CEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHH-HHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC----CEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHH-HHHHHHHHHHH
Confidence 899999999999999999999999 99999999865 4566644 44445678999999999999 99999999999
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
+| +||+||||||...+ .++.+++.++|++.+++|+.+++++++.++|.|.+++ ..++|+++||.++.
T Consensus 83 ~G--~iDiLVnnAG~~~~-~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~----------~g~~Iv~isS~~~~ 149 (261)
T d1geea_ 83 FG--KLDVMINNAGLENP-VSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVEND----------IKGTVINMSSVHEK 149 (261)
T ss_dssp HS--CCCEEEECCCCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT----------CCCEEEEECCGGGT
T ss_pred hC--CCCEeeccceecCC-cchhhcCHHHHHHHHHHhcccchhHHHHHhhhhcccc----------ccccccccccchhc
Confidence 98 69999999998876 7888999999999999999999999999999998863 35569999999998
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC-----------------CCCchhhHHH
Q psy11190 160 IEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN-----------------APLEVGAATA 222 (248)
Q Consensus 160 ~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~-----------------~~~~~~~~~~ 222 (248)
.+. ++...|+++|+|+.+|+++|+.|++++|||||+|+||+++|+|.... ...+|+|++.
T Consensus 150 ~~~---~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~ 226 (261)
T d1geea_ 150 IPW---PLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAA 226 (261)
T ss_dssp SCC---TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTSSCBCHHHHHH
T ss_pred ccC---ccccccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCCHHHHHHHHhcCCCCCCCCHHHHHH
Confidence 877 88899999999999999999999999999999999999999986431 1348999999
Q ss_pred HHHHHhhhcccccccceeeeCCe
Q psy11190 223 GIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 223 ~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
.+.+++++.+...||+.+.+||.
T Consensus 227 ~v~fL~S~~s~~itG~~i~vDGG 249 (261)
T d1geea_ 227 VAAWLASSEASYVTGITLFADGG 249 (261)
T ss_dssp HHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHHhCchhcCCcCCeEEECCC
Confidence 99999999899999999999986
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=8.2e-46 Score=302.94 Aligned_cols=217 Identities=20% Similarity=0.242 Sum_probs=195.3
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||++|||+++|++|+++| ++|++++|+.++++++.+. .+..++++|++|+++ ++++++++.+.++
T Consensus 6 K~~lITGas~GIG~aia~~l~~~G----~~V~~~~r~~~~l~~~~~~----~~~~~~~~Dv~~~~~-v~~~~~~~~~~~g 76 (242)
T d1ulsa_ 6 KAVLITGAAHGIGRATLELFAKEG----ARLVACDIEEGPLREAAEA----VGAHPVVMDVADPAS-VERGFAEALAHLG 76 (242)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHT----TTCEEEECCTTCHHH-HHHHHHHHHHHHS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHH----cCCeEEEEecCCHHH-HHHHHHHHHHhcC
Confidence 799999999999999999999999 9999999998887766433 256789999999999 9999999999998
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+||||||+..+ .++.+++.++|++.+++|+.+++++++.++|.|.++ +.+.++++|| .+..+
T Consensus 77 --~iDilVnnAG~~~~-~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-----------~~~~i~~~ss-~~~~~ 141 (242)
T d1ulsa_ 77 --RLDGVVHYAGITRD-NFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREK-----------NPGSIVLTAS-RVYLG 141 (242)
T ss_dssp --SCCEEEECCCCCCC-CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-----------CCEEEEEECC-GGGGC
T ss_pred --CceEEEECCccccc-CchhhCcchhhhccccccchhhhhhhhhcccccccc-----------ccceeeeecc-ccccC
Confidence 59999999998876 888899999999999999999999999999999885 5666766666 45555
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC---------------CCchhhHHHHHHH
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA---------------PLEVGAATAGIIQ 226 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~---------------~~~~~~~~~~~~~ 226 (248)
. ++...|+++|+|+.+|+++|+.||+++|||||+|+||+++|+|..... ..+|+|+++.+.+
T Consensus 142 ~---~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~pl~R~~~pedia~~v~f 218 (242)
T d1ulsa_ 142 N---LGQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPEKVREKAIAATPLGRAGKPLEVAYAALF 218 (242)
T ss_dssp C---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCHHHHHHHHHTCTTCSCBCHHHHHHHHHH
T ss_pred C---CCCcchHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcCCHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence 5 788999999999999999999999999999999999999999987643 2479999999999
Q ss_pred HhhhcccccccceeeeCCe
Q psy11190 227 FIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 227 ~~~~~~~~~~g~~~~~~g~ 245 (248)
++++.+...||+.+.+||.
T Consensus 219 L~S~~s~~itG~~i~vDGG 237 (242)
T d1ulsa_ 219 LLSDESSFITGQVLFVDGG 237 (242)
T ss_dssp HHSGGGTTCCSCEEEESTT
T ss_pred HhchhhCCCCCcEEEECCC
Confidence 9999899999999999986
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=2.4e-46 Score=305.14 Aligned_cols=213 Identities=23% Similarity=0.334 Sum_probs=188.6
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||++|||+++|++|+++| ++|++++|+.+.+ .++..+++|++|.++ ++++++++.+.++
T Consensus 8 K~~lITGas~GIG~aia~~la~~G----a~V~~~~r~~~~~----------~~~~~~~~Dv~~~~~-v~~~~~~~~~~~g 72 (237)
T d1uzma1 8 RSVLVTGGNRGIGLAIAQRLAADG----HKVAVTHRGSGAP----------KGLFGVEVDVTDSDA-VDRAFTAVEEHQG 72 (237)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT----CEEEEEESSSCCC----------TTSEEEECCTTCHHH-HHHHHHHHHHHHS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC----CEEEEEECCcchh----------cCceEEEEecCCHHH-HHHHHHHHHHhcC
Confidence 899999999999999999999999 9999999997653 367889999999999 9999999999998
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+||||||...+ .++.+.+.|+|++.+++|+.+++++++.++|.|.++ +.|+||++||.++..+
T Consensus 73 --~iDiLVnnAG~~~~-~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~-----------~~g~Iv~isS~~~~~~ 138 (237)
T d1uzma1 73 --PVEVLVSNAGLSAD-AFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRN-----------KFGRMIFIGSVSGLWG 138 (237)
T ss_dssp --SCSEEEEECSCCC------CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----------TCEEEEEECCCCC---
T ss_pred --CceEEEeeeccccc-ccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhccccc-----------CCCceEEEcchhhccC
Confidence 59999999998766 888999999999999999999999999999999987 6789999999999987
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC---------------CCchhhHHHHHHH
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA---------------PLEVGAATAGIIQ 226 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~---------------~~~~~~~~~~~~~ 226 (248)
. ++...|+++|+|+.+|+++|+.|++++|||||+|+||+++|+|.+... ..+|+|++..+.+
T Consensus 139 ~---~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~f 215 (237)
T d1uzma1 139 I---GNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERIQQGALQFIPAKRVGTPAEVAGVVSF 215 (237)
T ss_dssp -----CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSCHHHHHHHGGGCTTCSCBCHHHHHHHHHH
T ss_pred C---cccHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 7 788999999999999999999999999999999999999999864322 4589999999999
Q ss_pred HhhhcccccccceeeeCCee
Q psy11190 227 FIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 227 ~~~~~~~~~~g~~~~~~g~~ 246 (248)
++++.+...||+.+.+||..
T Consensus 216 L~S~~s~~itG~~i~vdGG~ 235 (237)
T d1uzma1 216 LASEDASYISGAVIPVDGGM 235 (237)
T ss_dssp HHSGGGTTCCSCEEEESTTT
T ss_pred HhCchhcCCcCCeEEECCCC
Confidence 99998999999999999963
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.8e-47 Score=309.96 Aligned_cols=218 Identities=23% Similarity=0.311 Sum_probs=196.5
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||++|||+++|+.|+++| ++|++++|+.+.++++.+. .+++.++++|++|.++ ++++++++.+.++
T Consensus 7 K~alITGas~GIG~aia~~la~~G----a~V~i~~r~~~~~~~~~~~---~~~~~~~~~Dvs~~~~-v~~~~~~~~~~~g 78 (250)
T d1ydea1 7 KVVVVTGGGRGIGAGIVRAFVNSG----ARVVICDKDESGGRALEQE---LPGAVFILCDVTQEDD-VKTLVSETIRRFG 78 (250)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHH---CTTEEEEECCTTSHHH-HHHHHHHHHHHHS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHh---cCCCeEEEccCCCHHH-HHHHHHHHHHhcC
Confidence 899999999999999999999999 8999999998887766443 3568899999999999 9999999999998
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+||||||......++++.+.++|++.+++|+.++++++++++|.|+++ +|+||++||..+..+
T Consensus 79 --~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~------------~G~Ii~isS~~~~~~ 144 (250)
T d1ydea1 79 --RLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS------------QGNVINISSLVGAIG 144 (250)
T ss_dssp --CCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------------TCEEEEECCHHHHHC
T ss_pred --CCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhC------------CCCCccccccccccc
Confidence 699999999987654678889999999999999999999999999999873 689999999999887
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC---------------------CCCchhhH
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN---------------------APLEVGAA 220 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~---------------------~~~~~~~~ 220 (248)
. ++...|+++|+|+.+|+++|+.|++++|||||+|+||+++|+|.+.. ...+|+|+
T Consensus 145 ~---~~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~ev 221 (250)
T d1ydea1 145 Q---AQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEV 221 (250)
T ss_dssp C---TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHHHH
T ss_pred c---cCcchhHHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCHHHH
Confidence 7 88899999999999999999999999999999999999999874321 13589999
Q ss_pred HHHHHHHhhhcccccccceeeeCCe
Q psy11190 221 TAGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 221 ~~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
+..+.+++++ +...||+.+.+||.
T Consensus 222 a~~v~fL~Sd-a~~itG~~i~vDGG 245 (250)
T d1ydea1 222 GAAAVFLASE-ANFCTGIELLVTGG 245 (250)
T ss_dssp HHHHHHHHHH-CTTCCSCEEEESTT
T ss_pred HHHHHHHhCc-cCCCcCCeEEECCC
Confidence 9999998876 77899999999985
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=100.00 E-value=4.9e-46 Score=306.20 Aligned_cols=221 Identities=21% Similarity=0.281 Sum_probs=199.7
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||++|||+++|+.|+++| ++|++++|+.++++++.+.. +.+..++++|++|.++ ++.+++++.+.++
T Consensus 7 K~alITGas~GIG~aia~~la~~G----a~V~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~-~~~~~~~~~~~~g 79 (253)
T d1hxha_ 7 KVALVTGGASGVGLEVVKLLLGEG----AKVAFSDINEAAGQQLAAEL--GERSMFVRHDVSSEAD-WTLVMAAVQRRLG 79 (253)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT----CEEEEECSCHHHHHHHHHHH--CTTEEEECCCTTCHHH-HHHHHHHHHHHHC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHHh--CCCeEEEEeecCCHHH-HHHHHHHHHHHhC
Confidence 799999999999999999999999 89999999998888875544 4578889999999999 9999999999998
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+||||||...+ .++.+.+.++|++.+++|+.+++++++.++|.|++ .+|+||++||.++..+
T Consensus 80 --~iDilVnnAG~~~~-~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~------------~~G~Iv~isS~~~~~~ 144 (253)
T d1hxha_ 80 --TLNVLVNNAGILLP-GDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKE------------TGGSIINMASVSSWLP 144 (253)
T ss_dssp --SCCEEEECCCCCCC-BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTT------------TCEEEEEECCGGGTSC
T ss_pred --CCCeEEecccccCC-CCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHh------------cCCceecccchhhhcC
Confidence 59999999998876 88999999999999999999999999999999976 4699999999999887
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccC--CCeEEEEecCcceecCCCCCC--------------------CCCchhh
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKG--DKIIATAMHPGWVKTDMGGSN--------------------APLEVGA 219 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~--~~i~v~~v~PG~v~t~~~~~~--------------------~~~~~~~ 219 (248)
. ++...|+++|+|+.+|+++++.|+++ +|||||+|+||+++|+|.+.. ...+|+|
T Consensus 145 ~---~~~~~Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~ped 221 (253)
T d1hxha_ 145 I---EQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPER 221 (253)
T ss_dssp C---TTBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBTTCCEECHHH
T ss_pred c---cccccccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcchhhHHHHHhCccccccCCCCCHHH
Confidence 7 88899999999999999999999987 569999999999999874221 1236999
Q ss_pred HHHHHHHHhhhcccccccceeeeCCeec
Q psy11190 220 ATAGIIQFIQSLGEAHNGGFFEYTGKAI 247 (248)
Q Consensus 220 ~~~~~~~~~~~~~~~~~g~~~~~~g~~~ 247 (248)
+++.+++++++.+...+|+.+.+||..+
T Consensus 222 vA~~v~fL~S~~s~~itG~~i~VDGG~~ 249 (253)
T d1hxha_ 222 IAQLVLFLASDESSVMSGSELHADNSIL 249 (253)
T ss_dssp HHHHHHHHHSGGGTTCCSCEEEESSSCT
T ss_pred HHHHHHHHhChhhCCCcCcEEEECccHh
Confidence 9999999999989999999999999753
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=100.00 E-value=4e-45 Score=300.73 Aligned_cols=217 Identities=16% Similarity=0.140 Sum_probs=198.1
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhcC
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVKD 82 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~~ 82 (248)
|+|||||++|||+++|++|+++| ++|++.+|+.+.++++...... +.++|+++.++ ++++++++.+.+|
T Consensus 2 TAlVTGas~GiG~aiA~~la~~G----a~V~i~~r~~~~~~~~~~~~~~-----~~~~dv~~~~~-~~~~~~~~~~~~G- 70 (252)
T d1zmta1 2 TAIVTNVKHFGGMGSALRLSEAG----HTVACHDESFKQKDELEAFAET-----YPQLKPMSEQE-PAELIEAVTSAYG- 70 (252)
T ss_dssp EEEESSTTSTTHHHHHHHHHHTT----CEEEECCGGGGSHHHHHHHHHH-----CTTSEECCCCS-HHHHHHHHHHHHS-
T ss_pred EEEEECCCCHHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHhhhCc-----EEEeccCCHHH-HHHHHHHHHHHcC-
Confidence 89999999999999999999999 9999999999988877554432 34689999999 9999999999998
Q ss_pred CCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcccc
Q psy11190 83 QGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIED 162 (248)
Q Consensus 83 ~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~~ 162 (248)
++|+||||||+..+..++.+++.++|++.+++|+.++++++++++|.|+++ +.|+||++||.++..+.
T Consensus 71 -~iDiLVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~-----------~~G~IV~isS~~~~~~~ 138 (252)
T d1zmta1 71 -QVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKR-----------KSGHIIFITSATPFGPW 138 (252)
T ss_dssp -CCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----------TCCEEEEECCSTTTSCC
T ss_pred -CCCEEEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhccc-----------ccceeeccccccccccc
Confidence 699999999987655788899999999999999999999999999999987 68999999999998877
Q ss_pred cCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC-----------------------CCchhh
Q psy11190 163 NTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA-----------------------PLEVGA 219 (248)
Q Consensus 163 ~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~-----------------------~~~~~~ 219 (248)
++...|+++|+|+.+|+++|+.||+++|||||+|+||+++|+|..... ..+|+|
T Consensus 139 ---~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl~R~g~ped 215 (252)
T d1zmta1 139 ---KELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKE 215 (252)
T ss_dssp ---TTCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSSCBCHHH
T ss_pred ---ccccccccccccHHHHHHHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCCCCCCcCHHH
Confidence 888999999999999999999999999999999999999999875532 348999
Q ss_pred HHHHHHHHhhhcccccccceeeeCCe
Q psy11190 220 ATAGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 220 ~~~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
++..+.+++++.+...||+.+.+||.
T Consensus 216 vA~~v~fL~S~~s~~iTG~~i~vdGG 241 (252)
T d1zmta1 216 LGELVAFLASGSCDYLTGQVFWLAGG 241 (252)
T ss_dssp HHHHHHHHHTTSCGGGTTCEEEESTT
T ss_pred HHHHHHHHhCchhcCCcCCeEEECCC
Confidence 99999999999999999999999996
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=100.00 E-value=1.3e-44 Score=298.51 Aligned_cols=223 Identities=25% Similarity=0.336 Sum_probs=199.3
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHH-hhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALA-QQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|++|||||++|||+++|++|+++| ++|++++|+.++++++.+.. ..+..++++.+|+++.++ ++++++++.+.+
T Consensus 7 K~alITGas~GIG~aia~~la~~G----~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~-~~~~~~~~~~~~ 81 (258)
T d1ae1a_ 7 TTALVTGGSKGIGYAIVEELAGLG----ARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTE-RDKLMQTVAHVF 81 (258)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH-HHHHHHHHHHHT
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHH-HHHHHHHHHHHh
Confidence 799999999999999999999999 99999999999988885444 445678899999999999 999999999998
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+ +.+|+||||||.... ..+.+++.++|++.+++|+.++++++++++|.|.++ ..|+||++||.++..
T Consensus 82 ~-g~idilinnag~~~~-~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~-----------~~g~ii~isS~~~~~ 148 (258)
T d1ae1a_ 82 D-GKLNILVNNAGVVIH-KEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKAS-----------QNGNVIFLSSIAGFS 148 (258)
T ss_dssp T-SCCCEEEECCCCCCC-CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----------TSEEEEEECCGGGTS
T ss_pred C-CCcEEEecccccccc-CccccCCHHHHhhhhhhccccccccccccccccccc-----------ccccccccccccccc
Confidence 4 259999999998876 889999999999999999999999999999999987 689999999999988
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC---------------------CCchhh
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA---------------------PLEVGA 219 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~---------------------~~~~~~ 219 (248)
+. +++..|+++|+|+++|++.|++|++++|||||+|+||+++|+|..... ..+|+|
T Consensus 149 ~~---~~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plgR~~~ped 225 (258)
T d1ae1a_ 149 AL---PSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQE 225 (258)
T ss_dssp CC---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTTCSCBCHHH
T ss_pred cc---ccchhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcCCCCCCcCHHH
Confidence 77 889999999999999999999999999999999999999999875532 248999
Q ss_pred HHHHHHHHhhhcccccccceeeeCCe
Q psy11190 220 ATAGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 220 ~~~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
++..+.+++++.+...+|+.+.+||.
T Consensus 226 iA~~v~fL~S~~s~~itG~~i~vDGG 251 (258)
T d1ae1a_ 226 VSALIAFLCFPAASYITGQIIWADGG 251 (258)
T ss_dssp HHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHHHHHhChhhCCCcCcEEEeCCC
Confidence 99999999999899999999999986
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=1.7e-44 Score=299.00 Aligned_cols=222 Identities=26% Similarity=0.298 Sum_probs=185.4
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHH-hhc---CCceeEEeeccCCchhhhhHHHHhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALA-QQH---SNLHVIELDVTDFSKQQDVLFKDIS 77 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~-~~~---~~~~~~~~D~~~~~~~v~~~~~~i~ 77 (248)
|++|||||++|||+++|++|+++| ++|++++|+.++++++.+.+ ..+ .++.++++|+++.++ ++++++++.
T Consensus 6 KvalVTGas~GIG~aia~~la~~G----a~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~-v~~~~~~~~ 80 (264)
T d1spxa_ 6 KVAIITGSSNGIGRATAVLFAREG----AKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAG-QDEILSTTL 80 (264)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHH-HHHHHHHHH
T ss_pred CEEEEeCcCCHHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHH-HHHHHHHHH
Confidence 899999999999999999999999 89999999999998885443 322 358899999999999 999999999
Q ss_pred hhhcCCCccEEEeccccCCc---cccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEee
Q psy11190 78 DVVKDQGLNVLVNNAGIAAK---FTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVS 154 (248)
Q Consensus 78 ~~~~~~~iD~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vs 154 (248)
+.+| ++|+||||||...+ ...+.+.+.|+|++.+++|+.++++++++++|.|+++ .|.+|+++
T Consensus 81 ~~~g--~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~------------~g~iI~~~ 146 (264)
T d1spxa_ 81 GKFG--KLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSST------------KGEIVNIS 146 (264)
T ss_dssp HHHS--CCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------------TCEEEEEC
T ss_pred HHhC--CCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccc------------cCcceeee
Confidence 9998 69999999998643 2345667899999999999999999999999999874 56677776
Q ss_pred cCC-CcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC--------------------
Q psy11190 155 SIM-GSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA-------------------- 213 (248)
Q Consensus 155 s~~-~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~-------------------- 213 (248)
|.. +..+. ++...|+++|+|+.+|+++|+.|++++|||||+|+||+++|+|.....
T Consensus 147 S~~~~~~~~---~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (264)
T d1spxa_ 147 SIASGLHAT---PDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECV 223 (264)
T ss_dssp CTTSSSSCC---TTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHC
T ss_pred eeccccccC---CCchhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhcC
Confidence 665 45555 788899999999999999999999999999999999999999865421
Q ss_pred ----CCchhhHHHHHHHHhhhc-ccccccceeeeCCe
Q psy11190 214 ----PLEVGAATAGIIQFIQSL-GEAHNGGFFEYTGK 245 (248)
Q Consensus 214 ----~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~g~ 245 (248)
..+|+|+++.++++++++ +...||+.+.+||.
T Consensus 224 Pl~R~g~pedvA~~v~fL~S~~~s~~itG~~i~vDGG 260 (264)
T d1spxa_ 224 PAGVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGG 260 (264)
T ss_dssp TTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTT
T ss_pred CCCCCcCHHHHHHHHHHHhCCcccCCccCceEEeCCC
Confidence 247999999999999854 77899999999985
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=100.00 E-value=2.7e-44 Score=298.91 Aligned_cols=221 Identities=26% Similarity=0.295 Sum_probs=190.4
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhc----CCceeEEeeccCCchhhhhHHHHhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQH----SNLHVIELDVTDFSKQQDVLFKDIS 77 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~v~~~~~~i~ 77 (248)
|++|||||++|||+++|++|+++| ++|++++|+.++++++.+.+... .++.++++|++|.++ ++.+++++.
T Consensus 6 K~alVTGas~GIG~aia~~la~~G----a~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~-v~~~~~~~~ 80 (272)
T d1xkqa_ 6 KTVIITGSSNGIGRTTAILFAQEG----ANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDG-QDQIINSTL 80 (272)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHH-HHHHHHHHH
T ss_pred CEEEEeCcCcHHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHH-HHHHHHHHH
Confidence 899999999999999999999999 99999999999999885544332 368899999999999 999999999
Q ss_pred hhhcCCCccEEEeccccCCccccC----CCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEe
Q psy11190 78 DVVKDQGLNVLVNNAGIAAKFTRL----GLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNV 153 (248)
Q Consensus 78 ~~~~~~~iD~lv~~ag~~~~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~v 153 (248)
+.+| ++|+||||||...+ ..+ .+.+.++|++.+++|+.++++++++++|.|+++ .|.+|++
T Consensus 81 ~~~g--~iDilvnnAG~~~~-~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~------------~g~iI~~ 145 (272)
T d1xkqa_ 81 KQFG--KIDVLVNNAGAAIP-DAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVAS------------KGEIVNV 145 (272)
T ss_dssp HHHS--CCCEEEECCCCCCC-CTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------------TCEEEEE
T ss_pred HHhC--CceEEEeCCcccCc-ccccccchhccHHHHHHHHHhhhhHHHHHHHhhccccccc------------CCccccc
Confidence 9998 69999999998765 333 346677899999999999999999999999875 3455555
Q ss_pred ec-CCCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC-------------------
Q psy11190 154 SS-IMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA------------------- 213 (248)
Q Consensus 154 ss-~~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~------------------- 213 (248)
+| .++..+. +++..|+++|+|+.+|+++|+.||+++|||||+|+||+|+|+|.....
T Consensus 146 ~Ss~a~~~~~---~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (272)
T d1xkqa_ 146 SSIVAGPQAQ---PDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKEC 222 (272)
T ss_dssp CCGGGSSSCC---CSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTT
T ss_pred cchhccccCC---CCcchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcC
Confidence 55 5666666 888999999999999999999999999999999999999999753211
Q ss_pred -----CCchhhHHHHHHHHhhhc-ccccccceeeeCCe
Q psy11190 214 -----PLEVGAATAGIIQFIQSL-GEAHNGGFFEYTGK 245 (248)
Q Consensus 214 -----~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~g~ 245 (248)
..+|+|++..+.+++++. +...||+.+.+||.
T Consensus 223 ~PlgR~g~pediA~~v~fL~S~~as~~iTG~~i~vDGG 260 (272)
T d1xkqa_ 223 IPIGAAGKPEHIANIILFLADRNLSFYILGQSIVADGG 260 (272)
T ss_dssp CTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTT
T ss_pred CCCCCCcCHHHHHHHHHHHhCcchhCCccCeEEEeCcC
Confidence 347999999999999865 56799999999986
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.9e-44 Score=295.19 Aligned_cols=217 Identities=24% Similarity=0.332 Sum_probs=192.4
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||++|||+++|++|+++| ++|++++|+.++++++.+. ...+..+.+|++|.++ ++++++ .++
T Consensus 8 K~~lITGas~GIG~aia~~la~~G----~~V~~~~r~~~~l~~~~~~---~~~~~~~~~Dv~d~~~-v~~~~~----~~g 75 (244)
T d1pr9a_ 8 RRVLVTGAGKGIGRGTVQALHATG----ARVVAVSRTQADLDSLVRE---CPGIEPVCVDLGDWEA-TERALG----SVG 75 (244)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHH---STTCEEEECCTTCHHH-HHHHHT----TCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcC----CEEEEEECCHHHHHHHHHh---cCCCeEEEEeCCCHHH-HHHHHH----HhC
Confidence 799999999999999999999999 9999999998887776443 3467889999999988 777654 345
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|.++. ..|+||++||.++..+
T Consensus 76 --~iDilVnnAg~~~~-~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~----------~~g~Ii~isS~~~~~~ 142 (244)
T d1pr9a_ 76 --PVDLLVNNAAVALL-QPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARG----------VPGAIVNVSSQCSQRA 142 (244)
T ss_dssp --CCCEEEECCCCCCC-BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT----------CCEEEEEECCGGGTSC
T ss_pred --CceEEEeccccccc-cchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhC----------CcceEeeccccccccc
Confidence 59999999998775 8889999999999999999999999999999765532 5799999999999887
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC-----------------CCchhhHHHHH
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA-----------------PLEVGAATAGI 224 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~-----------------~~~~~~~~~~~ 224 (248)
. ++...|+++|+|+.+|+++|+.||+++|||||+|+||+++|+|.+... ..+|+|+++.+
T Consensus 143 ~---~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~v 219 (244)
T d1pr9a_ 143 V---TNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAI 219 (244)
T ss_dssp C---TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCSHHHHHHHHTTCTTCSCBCHHHHHHHH
T ss_pred c---cchhhhhhhHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccChHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence 7 888999999999999999999999999999999999999999854321 35799999999
Q ss_pred HHHhhhcccccccceeeeCCee
Q psy11190 225 IQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 225 ~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
.+++++.+...||+.+.+||..
T Consensus 220 ~fL~S~~a~~itG~~i~vDGG~ 241 (244)
T d1pr9a_ 220 LFLLSDRSGMTTGSTLPVEGGF 241 (244)
T ss_dssp HHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHhCchhCCcCCcEEEECccH
Confidence 9999999999999999999963
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=100.00 E-value=2.7e-44 Score=299.13 Aligned_cols=223 Identities=26% Similarity=0.285 Sum_probs=195.8
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHh-hc---CCceeEEeeccCCchhhhhHHHHhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQ-QH---SNLHVIELDVTDFSKQQDVLFKDIS 77 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~-~~---~~~~~~~~D~~~~~~~v~~~~~~i~ 77 (248)
|++|||||++|||+++|++|+++| ++|++++|+.++++++.+.+. .+ .++.++++|++|.++ ++++++++.
T Consensus 5 K~alITGas~GIG~aia~~la~~G----a~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~-v~~~~~~~~ 79 (274)
T d1xhla_ 5 KSVIITGSSNGIGRSAAVIFAKEG----AQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASG-QDDIINTTL 79 (274)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHH-HHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHH-HHHHHHHHH
Confidence 899999999999999999999999 999999999999888854443 22 367899999999999 999999999
Q ss_pred hhhcCCCccEEEeccccCCc-cccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecC
Q psy11190 78 DVVKDQGLNVLVNNAGIAAK-FTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSI 156 (248)
Q Consensus 78 ~~~~~~~iD~lv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~ 156 (248)
+.+| ++|+||||||.... .....+.+.|+|++.+++|+.++++++++++|.|.++ +.++|+++||.
T Consensus 80 ~~~G--~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~-----------~~g~ii~~ss~ 146 (274)
T d1xhla_ 80 AKFG--KIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKT-----------KGEIVNVSSIV 146 (274)
T ss_dssp HHHS--CCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----------TCEEEEECCGG
T ss_pred HHcC--CceEEEeecccccccccccccCCHHHHHHHHhhccccccccccccccccccc-----------ccccccchhhh
Confidence 9998 69999999997643 2344556889999999999999999999999999886 57889999988
Q ss_pred CCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC------------------------
Q psy11190 157 MGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN------------------------ 212 (248)
Q Consensus 157 ~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~------------------------ 212 (248)
++..+. +++..|+++|+|+.+|+++||.|++++|||||+|+||+++|||....
T Consensus 147 ~~~~~~---~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iPlg 223 (274)
T d1xhla_ 147 AGPQAH---SGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVG 223 (274)
T ss_dssp GSSSCC---TTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTS
T ss_pred hccccC---CCCceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCCCC
Confidence 887776 78899999999999999999999999999999999999999964221
Q ss_pred CCCchhhHHHHHHHHhhh-cccccccceeeeCCe
Q psy11190 213 APLEVGAATAGIIQFIQS-LGEAHNGGFFEYTGK 245 (248)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~g~ 245 (248)
...+|+|++..++++++. .+...||+.+.+||.
T Consensus 224 R~g~pediA~~v~fL~S~d~s~~itG~~i~vDGG 257 (274)
T d1xhla_ 224 HCGKPEEIANIIVFLADRNLSSYIIGQSIVADGG 257 (274)
T ss_dssp SCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTT
T ss_pred CCcCHHHHHHHHHHHcCCccccCccCcEEEeCcC
Confidence 134799999999999975 578899999999986
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=100.00 E-value=7.4e-44 Score=294.47 Aligned_cols=227 Identities=23% Similarity=0.294 Sum_probs=199.2
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH-HHHHhh-cCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL-LALAQQ-HSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~-~~~~~~-~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|++|||||++|||+++|+.|+++| ++|++++|+.++++++ .++... +.++.++++|++++++ ++++++++.+.
T Consensus 10 K~alITGas~GIG~aia~~la~~G----a~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~-v~~~~~~~~~~ 84 (260)
T d1h5qa_ 10 KTIIVTGGNRGIGLAFTRAVAAAG----ANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDI-VTKTIQQIDAD 84 (260)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTT----EEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHH-HHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHH-HHHHHHHHHHH
Confidence 799999999999999999999999 9999999999988877 444333 5588999999999999 99999999999
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
+| ++|+||||||...+ .++.+++.++|++.+++|+.+++++++.++|.|.++. ..++|++++|....
T Consensus 85 ~g--~iDilVnnAg~~~~-~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~----------~~g~i~~~~s~~~~ 151 (260)
T d1h5qa_ 85 LG--PISGLIANAGVSVV-KPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQ----------QKGSIVVTSSMSSQ 151 (260)
T ss_dssp SC--SEEEEEECCCCCCC-SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT----------CCEEEEEECCGGGT
T ss_pred hC--CCcEeccccccccc-CCHHHhccccccccccccccchhhhhhhhcccccccc----------cceEEEEeeccccc
Confidence 98 69999999998765 8889999999999999999999999999999987653 56778888776655
Q ss_pred ccc----cCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC---------------CCchhhH
Q psy11190 160 IED----NTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA---------------PLEVGAA 220 (248)
Q Consensus 160 ~~~----~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~---------------~~~~~~~ 220 (248)
... .+.++...|+++|+|+.+|+++|+.||+++|||||+|+||+++|+|..... ..+|+|+
T Consensus 152 ~~~~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~R~g~pedv 231 (260)
T d1h5qa_ 152 IINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIRDHQASNIPLNRFAQPEEM 231 (260)
T ss_dssp SCCEEETTEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHHHHHTCTTSSCBCGGGG
T ss_pred cccccccccCccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhccCHHHHHHHHhcCCCCCCcCHHHH
Confidence 432 112466789999999999999999999999999999999999999875532 3579999
Q ss_pred HHHHHHHhhhcccccccceeeeCCee
Q psy11190 221 TAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 221 ~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
+..+.+++++.+...||+.+.+||..
T Consensus 232 A~~v~fL~S~~s~~itG~~i~VDGG~ 257 (260)
T d1h5qa_ 232 TGQAILLLSDHATYMTGGEYFIDGGQ 257 (260)
T ss_dssp HHHHHHHHSGGGTTCCSCEEEECTTG
T ss_pred HHHHHHHhcchhCCCcCceEEECCCe
Confidence 99999999998899999999999964
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1.4e-44 Score=295.55 Aligned_cols=217 Identities=22% Similarity=0.326 Sum_probs=192.0
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||++|||+++|++|+++| ++|++++|+.++++++.+. ...+..+.+|++|.++ ++++++ .+|
T Consensus 6 K~alITGas~GIG~aia~~la~~G----a~V~~~~r~~~~l~~~~~~---~~~~~~~~~Dv~~~~~-v~~~~~----~~g 73 (242)
T d1cyda_ 6 LRALVTGAGKGIGRDTVKALHASG----AKVVAVTRTNSDLVSLAKE---CPGIEPVCVDLGDWDA-TEKALG----GIG 73 (242)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHH---STTCEEEECCTTCHHH-HHHHHT----TCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHh---cCCCeEEEEeCCCHHH-HHHHHH----HcC
Confidence 899999999999999999999999 9999999998877766433 3468889999999988 777654 345
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+||||||.... .++.+++.++|++.+++|+.+++++++.++|.|.+++ ..|+||+++|..+..+
T Consensus 74 --~iDilVnnAg~~~~-~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~----------~~g~ii~isS~~~~~~ 140 (242)
T d1cyda_ 74 --PVDLLVNNAALVIM-QPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRG----------VPGSIVNVSSMVAHVT 140 (242)
T ss_dssp --CCSEEEECCCCCCC-BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT----------CCEEEEEECCGGGTSC
T ss_pred --CCeEEEECCccccc-hhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhc----------ccCcccccchhhcccc
Confidence 59999999998765 8899999999999999999999999999999876542 5789999999998877
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC-----------------CCchhhHHHHH
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA-----------------PLEVGAATAGI 224 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~-----------------~~~~~~~~~~~ 224 (248)
. ++...|+++|+|+.+|+++|+.|++++|||||+|+||+++|+|.+... ..+|+|++..+
T Consensus 141 ~---~~~~~Y~asKaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peeva~~v 217 (242)
T d1cyda_ 141 F---PNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSI 217 (242)
T ss_dssp C---TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTTSSCBCHHHHHHHH
T ss_pred C---CccccccchHHHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhcCCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence 6 888999999999999999999999999999999999999999853311 35799999999
Q ss_pred HHHhhhcccccccceeeeCCee
Q psy11190 225 IQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 225 ~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
.+++++.+...||+.+.+||.-
T Consensus 218 ~fL~S~~s~~itG~~i~vDGG~ 239 (242)
T d1cyda_ 218 LFLLSDRSASTSGGGILVDAGY 239 (242)
T ss_dssp HHHHSGGGTTCCSSEEEESTTG
T ss_pred HHHhCchhcCcCCceEEeCcch
Confidence 9999998999999999999963
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-43 Score=298.32 Aligned_cols=221 Identities=17% Similarity=0.196 Sum_probs=196.5
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHh-h-----cCCceeEEeeccCCchhhhhHHHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQ-Q-----HSNLHVIELDVTDFSKQQDVLFKD 75 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~-~-----~~~~~~~~~D~~~~~~~v~~~~~~ 75 (248)
|++|||||++|||+++|++|+++| ++|++++|+.+++++..+.+. . +.++.++++|++|.++ +++++++
T Consensus 13 KvalITGas~GIG~aia~~la~~G----a~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~-v~~~~~~ 87 (297)
T d1yxma1 13 QVAIVTGGATGIGKAIVKELLELG----SNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEE-VNNLVKS 87 (297)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHH-HHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHH-HHHHHHH
Confidence 899999999999999999999999 899999999999888744332 1 3478899999999999 9999999
Q ss_pred hhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeec
Q psy11190 76 ISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSS 155 (248)
Q Consensus 76 i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss 155 (248)
+.+.+| ++|+||||||.... .++.+.+.++|++.+++|+.++++++++++|.|.++ +.++||++|+
T Consensus 88 ~~~~~G--~iDiLVnnAg~~~~-~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~-----------~~g~Ii~~ss 153 (297)
T d1yxma1 88 TLDTFG--KINFLVNNGGGQFL-SPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKE-----------HGGSIVNIIV 153 (297)
T ss_dssp HHHHHS--CCCEEEECCCCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHH-----------HCEEEEEECC
T ss_pred HHHHhC--CeEEEEeecccccc-CchhhhhhhhhhhhhcccccchhhHHHHHHHhhccc-----------cccccccccc
Confidence 999998 59999999998765 888899999999999999999999999999999987 5788888866
Q ss_pred CCCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC-------------------CCc
Q psy11190 156 IMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA-------------------PLE 216 (248)
Q Consensus 156 ~~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~-------------------~~~ 216 (248)
. +..+. ++...|+++|+|+.+|+++||.|++++|||||+|+||+|+|++..... ..+
T Consensus 154 ~-~~~~~---~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~plgR~g~ 229 (297)
T d1yxma1 154 P-TKAGF---PLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGV 229 (297)
T ss_dssp C-CTTCC---TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBC
T ss_pred c-ccccc---cccccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHHHHHHHHhcCCCCCCcC
Confidence 4 44444 778899999999999999999999999999999999999999853321 347
Q ss_pred hhhHHHHHHHHhhhcccccccceeeeCCe
Q psy11190 217 VGAATAGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
|+|++..+.+++++.+...||+.+.+||.
T Consensus 230 pedvA~~v~fL~Sd~s~~iTG~~i~VDGG 258 (297)
T d1yxma1 230 PEEVSSVVCFLLSPAASFITGQSVDVDGG 258 (297)
T ss_dssp THHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHHHHHHHHhCchhcCcCCcEEEeCcC
Confidence 99999999999999999999999999985
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.2e-44 Score=291.06 Aligned_cols=209 Identities=23% Similarity=0.265 Sum_probs=189.1
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHH-HHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELL-ALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|++|||||++|||+++|++|+++| ++|++.+|+.++++++. ++...++++.++.+|++|.++ ++.+++.+.+.+
T Consensus 8 kv~lITGas~GIG~~ia~~la~~G----~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~-v~~~~~~i~~~~ 82 (244)
T d1yb1a_ 8 EIVLITGAGHGIGRLTAYEFAKLK----SKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNRED-IYSSAKKVKAEI 82 (244)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH-HHHHHHHHHHHT
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHH-HHHHHHHHHHHc
Confidence 799999999999999999999999 99999999999999884 454556689999999999999 999999999998
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
| ++|+||||||.... ..+.+.+.++|++.+++|+.+++++++.++|.|.++ +.|+||++||.++..
T Consensus 83 g--~idilinnag~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-----------~~G~Iv~isS~~~~~ 148 (244)
T d1yb1a_ 83 G--DVSILVNNAGVVYT-SDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKN-----------NHGHIVTVASAAGHV 148 (244)
T ss_dssp C--CCSEEEECCCCCCC-CCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----------TCEEEEEECCCC-CC
T ss_pred C--CCceeEeecccccc-ccccccchhHHHhhcceeeeccHHHHHHHhhhHHhc-----------CCceEEEeecchhcC
Confidence 8 59999999999876 777888999999999999999999999999999987 689999999999998
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccC---CCeEEEEecCcceecCCCCCC-----CCCchhhHHHHHHHHhhhcc
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKG---DKIIATAMHPGWVKTDMGGSN-----APLEVGAATAGIIQFIQSLG 232 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~---~~i~v~~v~PG~v~t~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 232 (248)
+. ++++.|+++|+|+.+|+++|+.|+++ +||+||+|+||+|+|+|.+.. ...+|+++++.++..+....
T Consensus 149 ~~---~~~~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~~~~~~~~~~~pe~va~~i~~~~~~~~ 225 (244)
T d1yb1a_ 149 SV---PFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNPSTSLGPTLEPEEVVNRLMHGILTEQ 225 (244)
T ss_dssp CH---HHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCTHHHHCCCCCHHHHHHHHHHHHHTTC
T ss_pred CC---CCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhCcCccccCCCCHHHHHHHHHHHHhcCC
Confidence 87 88899999999999999999999875 589999999999999998663 24689999999998876643
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.6e-44 Score=297.11 Aligned_cols=226 Identities=27% Similarity=0.358 Sum_probs=195.1
Q ss_pred CceEEEecCCCchhHHHHHHHHhC-CCCCCceEEEeecCchhHHHHH-HHHhhcCCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGL-GNNQPAHIFATCRNKDKAVELL-ALAQQHSNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~-g~~~~~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
|+++|||||++|||+++|++|+++ | ++|++.+|+.++++++. ++...+.++.++++|++|.++ ++++++++.+
T Consensus 3 ~rVAlVTGas~GIG~a~A~~la~~~g----~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~s-v~~~~~~~~~ 77 (275)
T d1wmaa1 3 IHVALVTGGNKGIGLAIVRDLCRLFS----GDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQS-IRALRDFLRK 77 (275)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHHSS----SEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHH-HHHHHHHHHH
T ss_pred CeEEEECCCCCHHHHHHHHHHHHhCC----CEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHH-HHHHHHHHHH
Confidence 678999999999999999999986 7 89999999999999884 455556789999999999999 9999999999
Q ss_pred hhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 79 VVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
.++ +||+||||||+..+ ....+.+.++|++.|++|+++++++++.++|.|++ .|+||+++|..+
T Consensus 78 ~~g--~iDiLVnNAGi~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~-------------~g~ivnisS~~~ 141 (275)
T d1wmaa1 78 EYG--GLDVLVNNAGIAFK-VADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP-------------QGRVVNVSSIMS 141 (275)
T ss_dssp HHS--SEEEEEECCCCCCC-TTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE-------------EEEEEEECCHHH
T ss_pred hcC--CcEEEEEcCCcCCC-CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------------cCCcccccccce
Confidence 998 59999999999875 66677788899999999999999999999999964 589999999876
Q ss_pred ccccc--------------------------------------CCCCCccchhhHHHHHHHHHHHHhhccC----CCeEE
Q psy11190 159 SIEDN--------------------------------------TQGGFHPYRCSKAALNAATRSLSIDLKG----DKIIA 196 (248)
Q Consensus 159 ~~~~~--------------------------------------~~~~~~~y~~sK~a~~~~~~~la~e~~~----~~i~v 196 (248)
..+.. ...+...|++||+++.+|++.++++|++ .||+|
T Consensus 142 ~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~v 221 (275)
T d1wmaa1 142 VRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILL 221 (275)
T ss_dssp HHHHHTSCHHHHHHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEE
T ss_pred eccccccchhhhhhhcccccchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEE
Confidence 54321 1123456999999999999999999864 59999
Q ss_pred EEecCcceecCCCCCCCCCchhhHHHHHHHHhh--hcccccccceeeeCCeecC
Q psy11190 197 TAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQ--SLGEAHNGGFFEYTGKAIK 248 (248)
Q Consensus 197 ~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~g~~~~ 248 (248)
|+|+||+++|+|.++....+|++.++..+++.. +.....+|+|+. +++++|
T Consensus 222 n~v~PG~v~T~m~~~~~~~~pee~A~~~~~~a~~~~~~~~~~G~~~~-~~~v~~ 274 (275)
T d1wmaa1 222 NACCPGWVRTDMAGPKATKSPEEGAETPVYLALLPPDAEGPHGQFVS-EKRVEQ 274 (275)
T ss_dssp EEEECCSBCSTTTCTTCSBCHHHHTHHHHHHHSCCTTCCCCCSCEEE-TTEEEC
T ss_pred EEEecccccCCcccCcccCCHHHHHHHHHHHHcCChhhcCCCeEEEE-CCEEec
Confidence 999999999999999999999999999888763 334567999997 787765
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.2e-43 Score=289.60 Aligned_cols=216 Identities=26% Similarity=0.333 Sum_probs=189.3
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHH-hh--cCCceeEEeeccCCchhhhhHHHHhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALA-QQ--HSNLHVIELDVTDFSKQQDVLFKDIS 77 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~-~~--~~~~~~~~~D~~~~~~~v~~~~~~i~ 77 (248)
.|++|||||++|||+++|++|+++| ++|++++|+.++++++.+.+ .. ..++.++++|++|.++ ++.+++++.
T Consensus 3 GKvalITGas~GIG~aia~~la~~G----a~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~-v~~~~~~~~ 77 (254)
T d2gdza1 3 GKVALVTGAAQGIGRAFAEALLLKG----AKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQ-LRDTFRKVV 77 (254)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHH-HHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHH-HHHHHHHHH
Confidence 3899999999999999999999999 99999999999988885443 32 3478899999999999 999999999
Q ss_pred hhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCC
Q psy11190 78 DVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIM 157 (248)
Q Consensus 78 ~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~ 157 (248)
+.+| ++|+||||||... .++|++.+++|+.+++++++.++|.|.+++.. ..|+||++||.+
T Consensus 78 ~~~G--~iDilVnnAg~~~---------~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~--------~~g~Iv~isS~~ 138 (254)
T d2gdza1 78 DHFG--RLDILVNNAGVNN---------EKNWEKTLQINLVSVISGTYLGLDYMSKQNGG--------EGGIIINMSSLA 138 (254)
T ss_dssp HHHS--CCCEEEECCCCCC---------SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTC--------CCEEEEEECCGG
T ss_pred HHcC--CcCeecccccccc---------cccchheeeeehhhHHHHHHHHHHHHHHhhcC--------CCcEEEeeccHh
Confidence 9998 6999999999753 35689999999999999999999999876321 358999999999
Q ss_pred CcccccCCCCCccchhhHHHHHHHHHH--HHhhccCCCeEEEEecCcceecCCCCCCC----------------------
Q psy11190 158 GSIEDNTQGGFHPYRCSKAALNAATRS--LSIDLKGDKIIATAMHPGWVKTDMGGSNA---------------------- 213 (248)
Q Consensus 158 ~~~~~~~~~~~~~y~~sK~a~~~~~~~--la~e~~~~~i~v~~v~PG~v~t~~~~~~~---------------------- 213 (248)
+..+. ++...|+++|+|+.+|+++ |+.|++++|||||+|+||+++|+|+....
T Consensus 139 ~~~~~---~~~~~Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 215 (254)
T d2gdza1 139 GLMPV---AQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYY 215 (254)
T ss_dssp GTSCC---TTCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHH
T ss_pred hccCC---CCccchHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhcCCCC
Confidence 98887 8889999999999999997 78899999999999999999999864321
Q ss_pred -CCchhhHHHHHHHHhhhcccccccceeeeCCe
Q psy11190 214 -PLEVGAATAGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 214 -~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
..+|+|+++.+++++++. ..||+.+.+||.
T Consensus 216 r~~~pedvA~~v~fL~s~~--~itG~~i~VdGG 246 (254)
T d2gdza1 216 GILDPPLIANGLITLIEDD--ALNGAIMKITTS 246 (254)
T ss_dssp CCBCHHHHHHHHHHHHHCT--TCSSCEEEEETT
T ss_pred CCcCHHHHHHHHHHHHcCC--CCCCCEEEECCC
Confidence 358999999999999863 489999999985
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.4e-43 Score=288.19 Aligned_cols=225 Identities=24% Similarity=0.302 Sum_probs=197.0
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHh-hc--CCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQ-QH--SNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~-~~--~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
|++|||||++|||+++|+.|+++| ++|++++|+.++++++.+.+. .+ .++.++++|++++++ ++++++++.+
T Consensus 11 Kv~lITGas~GIG~aiA~~la~~G----~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~-v~~~v~~~~~ 85 (257)
T d1xg5a_ 11 RLALVTGASGGIGAAVARALVQQG----LKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEED-ILSMFSAIRS 85 (257)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHH-HHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHH-HHHHHHHHHH
Confidence 799999999999999999999999 899999999999998854443 32 368899999999999 9999999999
Q ss_pred hhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 79 VVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
.+| ++|+||||||...+ .++.+.+.++|++.+++|+.+++++++.++|.|.+++. .+|+||++||.++
T Consensus 86 ~~g--~iD~lVnnAg~~~~-~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~---------~~g~Ii~isS~~~ 153 (257)
T d1xg5a_ 86 QHS--GVDICINNAGLARP-DTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNV---------DDGHIININSMSG 153 (257)
T ss_dssp HHC--CCSEEEECCCCCCC-CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC---------CSCEEEEECCGGG
T ss_pred hcC--CCCEEEecccccCC-CccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhcc---------CCCceEEEechHh
Confidence 998 59999999998876 88999999999999999999999999999999987532 4799999999998
Q ss_pred cccccCCCCCccchhhHHHHHHHHHHHHhhc--cCCCeEEEEecCcceecCCCCCC---------------CCCchhhHH
Q psy11190 159 SIEDNTQGGFHPYRCSKAALNAATRSLSIDL--KGDKIIATAMHPGWVKTDMGGSN---------------APLEVGAAT 221 (248)
Q Consensus 159 ~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~--~~~~i~v~~v~PG~v~t~~~~~~---------------~~~~~~~~~ 221 (248)
.... +..+...|+++|+++.+|+++|+.|+ +++|||||+|+||+++|++.... ...+|+|++
T Consensus 154 ~~~~-p~~~~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~r~~~pedvA 232 (257)
T d1xg5a_ 154 HRVL-PLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATYEQMKCLKPEDVA 232 (257)
T ss_dssp TSCC-SCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHHHHHC---CBCHHHHH
T ss_pred cCCC-CCcccHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcChhhHHHHHhcCCCCCCcCHHHHH
Confidence 6543 22556779999999999999999998 68899999999999999974321 246899999
Q ss_pred HHHHHHhhhcccccccce-eeeCC
Q psy11190 222 AGIIQFIQSLGEAHNGGF-FEYTG 244 (248)
Q Consensus 222 ~~~~~~~~~~~~~~~g~~-~~~~g 244 (248)
+.+++++++++...+|+. +..+|
T Consensus 233 ~~v~fL~s~~a~~itG~i~i~~~g 256 (257)
T d1xg5a_ 233 EAVIYVLSTPAHIQIGDIQMRPTG 256 (257)
T ss_dssp HHHHHHHHSCTTEEEEEEEEEETT
T ss_pred HHHHHHhCChhcCeECCEEEEeCC
Confidence 999999999999999985 66655
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=100.00 E-value=9.2e-43 Score=290.14 Aligned_cols=220 Identities=23% Similarity=0.297 Sum_probs=191.5
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||++|||+++|++|+++| ++|++++|+.++++++.+.. +.++.++.+|+++.++ ++++++++.+.++
T Consensus 6 K~alITGas~GIG~aia~~la~~G----a~V~i~~r~~~~l~~~~~~~--~~~~~~~~~Dv~~~~~-~~~~~~~~~~~~g 78 (276)
T d1bdba_ 6 EAVLITGGASGLGRALVDRFVAEG----AKVAVLDKSAERLAELETDH--GDNVLGIVGDVRSLED-QKQAASRCVARFG 78 (276)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHH--GGGEEEEECCTTCHHH-HHHHHHHHHHHHS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHHc--CCCeeEEecccccHHH-HHHHHHHHHHHhC
Confidence 699999999999999999999999 99999999998887765443 4578899999999999 9999999999998
Q ss_pred CCCccEEEeccccCCcccc----CCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCC
Q psy11190 82 DQGLNVLVNNAGIAAKFTR----LGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIM 157 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~ 157 (248)
++|++|||||+...... ..+.+.++|++.+++|+.+++++++.++|.|+++ +|+||+++|.+
T Consensus 79 --~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~------------~g~iI~i~S~~ 144 (276)
T d1bdba_ 79 --KIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVAS------------RGNVIFTISNA 144 (276)
T ss_dssp --CCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------------TCEEEEECCGG
T ss_pred --CcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhc------------CCCceeeeech
Confidence 59999999998654222 2334456799999999999999999999999874 58899999999
Q ss_pred CcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC------------------------
Q psy11190 158 GSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA------------------------ 213 (248)
Q Consensus 158 ~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~------------------------ 213 (248)
+..+. ++...|+++|+|+.+|+++||.||+++ ||||+|+||+++|+|..+..
T Consensus 145 ~~~~~---~~~~~Y~asKaal~~ltr~lA~ela~~-IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~Plg 220 (276)
T d1bdba_ 145 GFYPN---GGGPLYTAAKHAIVGLVRELAFELAPY-VRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIG 220 (276)
T ss_dssp GTSTT---SSCHHHHHHHHHHHHHHHHHHHHHTTT-CEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTCTTS
T ss_pred hccCC---CCCchHHHHHHHHHHHHHHHHHHhhcc-eEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcCCCC
Confidence 88876 888999999999999999999999975 99999999999999864311
Q ss_pred -CCchhhHHHHHHHHhhh-cccccccceeeeCCee
Q psy11190 214 -PLEVGAATAGIIQFIQS-LGEAHNGGFFEYTGKA 246 (248)
Q Consensus 214 -~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~g~~ 246 (248)
..+|+|++..+++++++ .+...||+.+.+||..
T Consensus 221 R~g~peeva~~v~fL~S~~~a~~itG~~i~VDGG~ 255 (276)
T d1bdba_ 221 RMPEVEEYTGAYVFFATRGDAAPATGALLNYDGGL 255 (276)
T ss_dssp SCCCGGGGSHHHHHHHCHHHHTTCSSCEEEESSSG
T ss_pred CCcCHHHHHHHHHHHcCCcccCCeeCcEEEECcCh
Confidence 24799999999999975 5788999999999963
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=8.7e-43 Score=287.44 Aligned_cols=221 Identities=20% Similarity=0.224 Sum_probs=191.7
Q ss_pred ceEEEecCCC--chhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCNR--GLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~--giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|++|||||+| |||+++|++|+++| ++|++.+|+.+..++..+.....++..++++|++|.++ ++++++++.+.
T Consensus 9 K~alITGas~~~GIG~aiA~~la~~G----a~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-v~~~~~~~~~~ 83 (256)
T d1ulua_ 9 KKALVMGVTNQRSLGFAIAAKLKEAG----AEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEE-LDALFAGVKEA 83 (256)
T ss_dssp CEEEEESCCCSSSHHHHHHHHHHHTT----CEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHH-HHHHHHHHHHH
T ss_pred CEEEEECCCCCchHHHHHHHHHHHCC----CEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHH-HHHHHHHHHHh
Confidence 7999999987 99999999999999 89999999976666666666667788899999999999 99999999999
Q ss_pred hcCCCccEEEeccccCCc---cccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecC
Q psy11190 80 VKDQGLNVLVNNAGIAAK---FTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSI 156 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~ 156 (248)
++ ++|+||||||.... ...+.+.+.++|++.+++|+.+++.+++.++|.|.+ .|+||++||.
T Consensus 84 ~g--~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~-------------~G~Iv~isS~ 148 (256)
T d1ulua_ 84 FG--GLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE-------------GGGIVTLTYY 148 (256)
T ss_dssp HS--SEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE-------------EEEEEEEECG
T ss_pred cC--CceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhcc-------------CCEEEEEeeh
Confidence 98 59999999998643 134567788999999999999999999999999864 5899999999
Q ss_pred CCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC-----------------CCchhh
Q psy11190 157 MGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA-----------------PLEVGA 219 (248)
Q Consensus 157 ~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~-----------------~~~~~~ 219 (248)
.+..+. ++...|+++|+|+.+|+++||.||+++|||||+|+||+++|++..... ..+|+|
T Consensus 149 ~~~~~~---~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~~~~~~~pl~R~~~ped 225 (256)
T d1ulua_ 149 ASEKVV---PKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEE 225 (256)
T ss_dssp GGTSBC---TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------CHHHHHHHHHHSTTSSCCCHHH
T ss_pred HhcCCC---CCchHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhhHHHHHHHHhcCCCCCCcCHHH
Confidence 998877 888999999999999999999999999999999999999999876532 358999
Q ss_pred HHHHHHHHhhhcccccccceeeeCCe
Q psy11190 220 ATAGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 220 ~~~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
+++.+.+++++.+...||+.+.+||.
T Consensus 226 vA~~v~fL~S~~s~~itG~~i~VDGG 251 (256)
T d1ulua_ 226 VGNLGLFLLSPLASGITGEVVYVDAG 251 (256)
T ss_dssp HHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHHHHHhCchhCCccCCeEEECcC
Confidence 99999999999899999999999985
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=100.00 E-value=4.9e-43 Score=286.28 Aligned_cols=217 Identities=19% Similarity=0.270 Sum_probs=188.9
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||++|||+++|++|+++| ++|++.+|+.++++++.+.. +.++.++++|++++++ ++++++++.+.+|
T Consensus 6 K~alItGas~GIG~aia~~l~~~G----~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dls~~~~-i~~~~~~i~~~~g 78 (241)
T d2a4ka1 6 KTILVTGAASGIGRAALDLFAREG----ASLVAVDREERLLAEAVAAL--EAEAIAVVADVSDPKA-VEAVFAEALEEFG 78 (241)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHTC--CSSEEEEECCTTSHHH-HHHHHHHHHHHHS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHHc--CCceEEEEecCCCHHH-HHHHHHHHHHHhC
Confidence 899999999999999999999999 99999999998876654332 5688899999999999 9999999999998
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+||||||.... .++.+.+.++|++.+++|+.+++.+++.++|.|.+ .+.++++||.+ ..+
T Consensus 79 --~iDiLinnAg~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~-------------~~~i~~~ss~a-~~~ 141 (241)
T d2a4ka1 79 --RLHGVAHFAGVAHS-ALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEE-------------GGSLVLTGSVA-GLG 141 (241)
T ss_dssp --CCCEEEEGGGGTTT-TC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCT-------------TCEEEEECCCT-TCC
T ss_pred --CccEeccccccccc-cchhhhhcccccccccccccccccccccccccccc-------------ccceeeccccc-ccc
Confidence 69999999998765 88899999999999999999999999999998765 34555555544 444
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC---------------CCchhhHHHHHHH
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA---------------PLEVGAATAGIIQ 226 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~---------------~~~~~~~~~~~~~ 226 (248)
. +++..|+++|+|+++|++.|++|++++|||||+|+||+++|+|..... ..+|+|+++.+.+
T Consensus 142 ~---~~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~f 218 (241)
T d2a4ka1 142 A---FGLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPPWAWEQEVGASPLGRAGRPEEVAQAALF 218 (241)
T ss_dssp H---HHHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCHHHHHHHHHTSTTCSCBCHHHHHHHHHH
T ss_pred c---cCccccchhhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHhhhHhHHHHHHhCCCCCCCcCHHHHHHHHHH
Confidence 4 667899999999999999999999999999999999999999876543 3489999999999
Q ss_pred HhhhcccccccceeeeCCe
Q psy11190 227 FIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 227 ~~~~~~~~~~g~~~~~~g~ 245 (248)
++++.+...||+.+.+||.
T Consensus 219 L~S~~s~~itG~~i~vDGG 237 (241)
T d2a4ka1 219 LLSEESAYITGQALYVDGG 237 (241)
T ss_dssp HHSGGGTTCCSCEEEESTT
T ss_pred HhcchhCCCcCceEEeCCC
Confidence 9999999999999999985
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=9.1e-43 Score=293.25 Aligned_cols=220 Identities=19% Similarity=0.216 Sum_probs=193.4
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCch---------hHHHHHHHHhhcCCceeEEeeccCCchhhhhH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKD---------KAVELLALAQQHSNLHVIELDVTDFSKQQDVL 72 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~---------~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~ 72 (248)
|++|||||++|||+++|++|+++| ++|++.+++.+ .++++.+... .+.....+|+++.++ ++++
T Consensus 8 KvalITGas~GIG~aiA~~la~~G----a~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~d~~~~~~-~~~~ 80 (302)
T d1gz6a_ 8 RVVLVTGAGGGLGRAYALAFAERG----ALVVVNDLGGDFKGVGKGSSAADKVVEEIR--RRGGKAVANYDSVEA-GEKL 80 (302)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT----CEEEEECCCBCTTSCBCCSHHHHHHHHHHH--HTTCEEEEECCCGGG-HHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcC----CEEEEEeCCchhhhhhhhHHHHHHHHHHHh--hcccccccccchHHH-HHHH
Confidence 799999999999999999999999 89999877543 3444433332 245667899999999 9999
Q ss_pred HHHhhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEE
Q psy11190 73 FKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVN 152 (248)
Q Consensus 73 ~~~i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~ 152 (248)
++.+.+.+| ++|+||||||+..+ .++.+++.++|++.+++|+.+++++++.++|.|+++ +.|+||+
T Consensus 81 v~~~~~~~G--~iDiLVnNAGi~~~-~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-----------~~G~IV~ 146 (302)
T d1gz6a_ 81 VKTALDTFG--RIDVVVNNAGILRD-RSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQ-----------NYGRIIM 146 (302)
T ss_dssp HHHHHHHTS--CCCEEEECCCCCCC-CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------TCEEEEE
T ss_pred HHHHHHHcC--CCCEEEECCccCCC-CChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhC-----------CCcEEEE
Confidence 999999998 69999999999876 889999999999999999999999999999999987 6799999
Q ss_pred eecCCCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC-----CCchhhHHHHHHHH
Q psy11190 153 VSSIMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA-----PLEVGAATAGIIQF 227 (248)
Q Consensus 153 vss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~-----~~~~~~~~~~~~~~ 227 (248)
+||.++..+. ++...|+++|+++.+|+++|+.|++++|||||+|+||++.|++..... ..+|++++..++++
T Consensus 147 isS~~~~~~~---~~~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~~~~~~~~~~~PedvA~~v~fL 223 (302)
T d1gz6a_ 147 TASASGIYGN---FGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETVMPEDLVEALKPEYVAPLVLWL 223 (302)
T ss_dssp ECCHHHHHCC---TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGGSCHHHHHHSCGGGTHHHHHHH
T ss_pred eCChhhcCCC---CCcHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhcCcHhhHhcCCHHHHHHHHHHH
Confidence 9999998887 889999999999999999999999999999999999999888755443 36799999999998
Q ss_pred hhhcccccccceeeeCCee
Q psy11190 228 IQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 228 ~~~~~~~~~g~~~~~~g~~ 246 (248)
+++.. ..+|+.+.+||.-
T Consensus 224 ~S~~a-~itG~~i~vdGG~ 241 (302)
T d1gz6a_ 224 CHESC-EENGGLFEVGAGW 241 (302)
T ss_dssp TSTTC-CCCSCEEEEETTE
T ss_pred cCCCc-CCCCcEEEeCCCc
Confidence 87654 6899999999864
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=100.00 E-value=7.2e-43 Score=288.37 Aligned_cols=223 Identities=23% Similarity=0.273 Sum_probs=192.5
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEee-cCchhHHHHHHH-HhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATC-RNKDKAVELLAL-AQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~-r~~~~~~~~~~~-~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|++|||||++|||+++|+.|+++| ++|++.+ |+.+.++++.+. ...+.++.++++|++|.++ ++.+++++.+.
T Consensus 7 K~alITGas~GIG~aia~~la~~G----~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~-v~~~~~~~~~~ 81 (259)
T d1ja9a_ 7 KVALTTGAGRGIGRGIAIELGRRG----ASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSE-VVALFDKAVSH 81 (259)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT----CEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHH-HHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcC----CEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHH-HHHHHHHHHHH
Confidence 899999999999999999999999 8998865 555556776444 4446689999999999999 99999999999
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
++ ++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|++ ++++++++|..+.
T Consensus 82 ~g--~idilinnag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~-------------~g~~iii~s~~~~ 145 (259)
T d1ja9a_ 82 FG--GLDFVMSNSGMEVW-CDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRR-------------GGRIILTSSIAAV 145 (259)
T ss_dssp HS--CEEEEECCCCCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEE-------------EEEEEEECCGGGT
T ss_pred cC--CCcEEEeccccccc-cccccchHHHHHHHHhhccceeeeehhhhhhhhhc-------------CCccccccccccc
Confidence 98 59999999998765 88888999999999999999999999999999965 4567777666554
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC----------------------------
Q psy11190 160 IEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS---------------------------- 211 (248)
Q Consensus 160 ~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~---------------------------- 211 (248)
.. +.+++..|+++|+|+.+|+++|++||+++|||||+|+||+++|+|.+.
T Consensus 146 ~~--~~~~~~~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl 223 (259)
T d1ja9a_ 146 MT--GIPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPL 223 (259)
T ss_dssp CC--SCCSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTT
T ss_pred cc--CCCCchhHHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCCC
Confidence 42 237889999999999999999999999999999999999999986311
Q ss_pred CCCCchhhHHHHHHHHhhhcccccccceeeeCCeec
Q psy11190 212 NAPLEVGAATAGIIQFIQSLGEAHNGGFFEYTGKAI 247 (248)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~ 247 (248)
....+|+|+++.+++++++.+...||+.+.+||.-+
T Consensus 224 ~R~g~p~eVa~~v~fL~S~~a~~itG~~i~vDGG~~ 259 (259)
T d1ja9a_ 224 KRIGYPADIGRAVSALCQEESEWINGQVIKLTGGGI 259 (259)
T ss_dssp SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred CCCcCHHHHHHHHHHHhCchhcCCcCceEEeCCCCC
Confidence 013579999999999999999999999999999753
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=3.7e-42 Score=279.97 Aligned_cols=208 Identities=19% Similarity=0.234 Sum_probs=182.8
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||++|||+++|++|+++| ++|++++|+.+.+++. ...++.+|+++. ++. +.+.++
T Consensus 5 K~~lVTGas~GIG~aia~~l~~~G----a~V~~~~r~~~~l~~~--------~~~~~~~Dv~~~---~~~----~~~~~g 65 (234)
T d1o5ia_ 5 KGVLVLAASRGIGRAVADVLSQEG----AEVTICARNEELLKRS--------GHRYVVCDLRKD---LDL----LFEKVK 65 (234)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHT--------CSEEEECCTTTC---HHH----HHHHSC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC----CEEEEEECCHHHHHhc--------CCcEEEcchHHH---HHH----HHHHhC
Confidence 799999999999999999999999 9999999997665432 345678898763 444 445555
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+||||||.... .++.+++.++|++.+++|+.+++++++.++|.|+++ +.|+||+++|..+..+
T Consensus 66 --~iD~lVnnAG~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-----------~~G~ii~i~S~~~~~~ 131 (234)
T d1o5ia_ 66 --EVDILVLNAGGPKA-GFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEK-----------GWGRIVAITSFSVISP 131 (234)
T ss_dssp --CCSEEEECCCCCCC-BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----------TCEEEEEECCGGGTSC
T ss_pred --CCcEEEecccccCC-cchhhhhhHHHHHHhhhhhhhhhhhhhccccccccc-----------cccccccccccccccc
Confidence 59999999998765 788899999999999999999999999999999986 6899999999998877
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC----------------CCchhhHHHHHH
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA----------------PLEVGAATAGII 225 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~----------------~~~~~~~~~~~~ 225 (248)
. ++...|+++|+|+.+|+++++.||+++|||||+|+||+++|++..... ..+|+|++..++
T Consensus 132 ~---~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~ 208 (234)
T d1o5ia_ 132 I---ENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEKKKQVESQIPMRRMAKPEEIASVVA 208 (234)
T ss_dssp C---TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCHHHHHHHHTTSTTSSCBCHHHHHHHHH
T ss_pred c---cccccchhHHHHHHHHHHHHHHHhcccCeEEeecccCccchhhhhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence 6 888999999999999999999999999999999999999999854311 357999999999
Q ss_pred HHhhhcccccccceeeeCCe
Q psy11190 226 QFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 226 ~~~~~~~~~~~g~~~~~~g~ 245 (248)
+++++.+...||+.+.+||.
T Consensus 209 fL~S~~s~~itG~~i~vDGG 228 (234)
T d1o5ia_ 209 FLCSEKASYLTGQTIVVDGG 228 (234)
T ss_dssp HHHSGGGTTCCSCEEEESTT
T ss_pred HHhChhhcCCcCcEEEECcc
Confidence 99999899999999999996
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=100.00 E-value=4.2e-42 Score=282.73 Aligned_cols=215 Identities=22% Similarity=0.289 Sum_probs=185.1
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhh--cCCceeEEeecc-CCchhhhhHHHHhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQ--HSNLHVIELDVT-DFSKQQDVLFKDISD 78 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~-~~~~~v~~~~~~i~~ 78 (248)
|++|||||++|||+++|++|+++| ++|++++|+.++.+++.++... ..++.++.+|++ +.++ ++++++++.+
T Consensus 6 K~vlITGgs~GIG~~~A~~la~~G----~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~~~~~~~~ 80 (254)
T d1sbya1 6 KNVIFVAALGGIGLDTSRELVKRN----LKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAE-SKKLLKKIFD 80 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTC----CSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHH-HHHHHHHHHH
T ss_pred CEEEEecCCCHHHHHHHHHHHHCC----CEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHH-HHHHHHHHHH
Confidence 799999999999999999999999 8999999988877766554443 336888999998 4456 9999999999
Q ss_pred hhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 79 VVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
.++ +||+||||||.. +.+.|++.+++|+.+++++++.++|.|.+++. .+.|+||+++|.++
T Consensus 81 ~~g--~iDilvnnAG~~---------~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~--------~~~g~Ii~isS~~~ 141 (254)
T d1sbya1 81 QLK--TVDILINGAGIL---------DDHQIERTIAINFTGLVNTTTAILDFWDKRKG--------GPGGIIANICSVTG 141 (254)
T ss_dssp HHS--CCCEEEECCCCC---------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGT--------CCCEEEEEECCGGG
T ss_pred HcC--CCCEEEeCCCCC---------CHHHHHHHHHHHhHHHHHHHHHHHHHhhhccc--------CCCceEEEEechhh
Confidence 998 699999999953 45789999999999999999999999987632 14689999999999
Q ss_pred cccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC-----------------CCchhhHH
Q psy11190 159 SIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA-----------------PLEVGAAT 221 (248)
Q Consensus 159 ~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~-----------------~~~~~~~~ 221 (248)
..+. +++..|+++|+|+.+|+++|+.|++++|||||+|+||+++|+|.+... ..+||+++
T Consensus 142 ~~~~---~~~~~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~va 218 (254)
T d1sbya1 142 FNAI---HQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCG 218 (254)
T ss_dssp TSCC---TTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTTSCCEEHHHHH
T ss_pred ccCC---CCCHHHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCccccccccchhHHHHHHhccccCCCCCHHHHH
Confidence 8887 889999999999999999999999999999999999999999754321 34689999
Q ss_pred HHHHHHhhhcccccccceeeeCCee
Q psy11190 222 AGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 222 ~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
+.++..++. ..+|+.|.+||..
T Consensus 219 ~~~~~~~~~---~~tG~vi~vdgG~ 240 (254)
T d1sbya1 219 QNFVKAIEA---NKNGAIWKLDLGT 240 (254)
T ss_dssp HHHHHHHHH---CCTTCEEEEETTE
T ss_pred HHHHHhhhC---CCCCCEEEECCCE
Confidence 988887765 3599999999864
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=100.00 E-value=1.3e-41 Score=282.67 Aligned_cols=222 Identities=21% Similarity=0.310 Sum_probs=194.3
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCc-hhHHHHHH-HHhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNK-DKAVELLA-LAQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~-~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|++|||||++|||+++|+.|+++| ++|++++|+. +.++++.+ +...+.++.++++|++|+++ ++.+++++.+.
T Consensus 19 K~~lITGas~GIG~aia~~la~~G----a~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~-v~~~~~~~~~~ 93 (272)
T d1g0oa_ 19 KVALVTGAGRGIGREMAMELGRRG----CKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVED-IVRMFEEAVKI 93 (272)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT----CEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH-HHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcC----CEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHH-HHHHHHHHHHH
Confidence 899999999999999999999999 8999998875 45566644 44456689999999999999 99999999999
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
++ ++|++|||+|.... .++.+.+.++|++.+++|+.+++++++.++|.|.+ .+++++++|..+.
T Consensus 94 ~g--~idilV~nag~~~~-~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~-------------~g~~i~i~s~~~~ 157 (272)
T d1g0oa_ 94 FG--KLDIVCSNSGVVSF-GHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEI-------------GGRLILMGSITGQ 157 (272)
T ss_dssp HS--CCCEEEECCCCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCT-------------TCEEEEECCGGGT
T ss_pred hC--CCCccccccccchh-hhhhhhhhhHHHHHhhhccceeeeecccccccccc-------------ccccccccccccc
Confidence 98 69999999998765 78889999999999999999999999999999975 5778888887765
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC----------------------------
Q psy11190 160 IEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS---------------------------- 211 (248)
Q Consensus 160 ~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~---------------------------- 211 (248)
... .++...|+++|+|+.+|+++|++||+++|||||+|+||+++|+|.+.
T Consensus 158 ~~~--~~~~~~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl 235 (272)
T d1g0oa_ 158 AKA--VPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPL 235 (272)
T ss_dssp CSS--CSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTT
T ss_pred ccc--ccchhhHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccCCC
Confidence 432 26678899999999999999999999999999999999999986311
Q ss_pred CCCCchhhHHHHHHHHhhhcccccccceeeeCCee
Q psy11190 212 NAPLEVGAATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
....+|+|++..+.+++++.+...||+.+.+||..
T Consensus 236 gR~~~peevA~~v~fL~s~~s~~itG~~i~vDGG~ 270 (272)
T d1g0oa_ 236 RRVGLPIDIARVVCFLASNDGGWVTGKVIGIDGGA 270 (272)
T ss_dssp CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred CCCcCHHHHHHHHHHHhCchhcCccCceEeECCCC
Confidence 11357999999999999998999999999999963
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.2e-41 Score=281.97 Aligned_cols=211 Identities=22% Similarity=0.255 Sum_probs=176.2
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHH----HhhcCCceeEEeeccCCchhhhhHHHHh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLAL----AQQHSNLHVIELDVTDFSKQQDVLFKDI 76 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~~~D~~~~~~~v~~~~~~i 76 (248)
+|++|||||++|||+++|++|+++|+ .+..|....|+.+..+++.+. ...+.++.++++|++|.++ ++.+++++
T Consensus 2 kkVvlITGassGIG~a~A~~la~~Ga-~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~~~ 79 (285)
T d1jtva_ 2 RTVVLITGCSSGIGLHLAVRLASDPS-QSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKS-VAAARERV 79 (285)
T ss_dssp CEEEEESCCSSHHHHHHHHHHHTCTT-CCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHH-HHHHHHTC
T ss_pred CCEEEEccCCCHHHHHHHHHHHHCCC-CeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHh-hhhhhhhc
Confidence 47899999999999999999999993 122355566666555444332 2234588999999999999 99998887
Q ss_pred hhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecC
Q psy11190 77 SDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSI 156 (248)
Q Consensus 77 ~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~ 156 (248)
.+ + ++|+||||||.... ..+.+.+.++|++.+++|+.|++++++.++|.|+++ +.|+||++||.
T Consensus 80 ~~--g--~idilvnnag~~~~-~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~-----------~~G~Iv~isS~ 143 (285)
T d1jtva_ 80 TE--G--RVDVLVCNAGLGLL-GPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRR-----------GSGRVLVTGSV 143 (285)
T ss_dssp TT--S--CCSEEEECCCCCCC-SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----------TCEEEEEEEEG
T ss_pred cc--c--chhhhhhccccccc-ccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHc-----------CCCceEEEech
Confidence 64 3 69999999998876 788889999999999999999999999999999987 68999999999
Q ss_pred CCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC-----------------------
Q psy11190 157 MGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA----------------------- 213 (248)
Q Consensus 157 ~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~----------------------- 213 (248)
++..+. +++..|+++|+|+.+|+++|+.|++++|||||+|+||+|+|+|.+...
T Consensus 144 ~g~~~~---~~~~~Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (285)
T d1jtva_ 144 GGLMGL---PFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLA 220 (285)
T ss_dssp GGTSCC---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHH
T ss_pred hhcCCC---CCchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHH
Confidence 999887 888999999999999999999999999999999999999999976532
Q ss_pred ---------CCchhhHHHHHHHHhhhcc
Q psy11190 214 ---------PLEVGAATAGIIQFIQSLG 232 (248)
Q Consensus 214 ---------~~~~~~~~~~~~~~~~~~~ 232 (248)
..+|+|+++.+++.+....
T Consensus 221 ~~~~~~~~~~~~PeeVA~~v~~~~~~~~ 248 (285)
T d1jtva_ 221 HSKQVFREAAQNPEEVAEVFLTALRAPK 248 (285)
T ss_dssp HHHHHHHHHCBCHHHHHHHHHHHHHCSS
T ss_pred HHhhhhcccCCCHHHHHHHHHHHHhCCC
Confidence 3479999999999997754
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=2.4e-41 Score=279.21 Aligned_cols=223 Identities=19% Similarity=0.283 Sum_probs=189.9
Q ss_pred CceEEEecCCCchhHHHHHHHHh---CCCCCCceEEEeecCchhHHHHHH-HHhh--cCCceeEEeeccCCchhhhhHHH
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVG---LGNNQPAHIFATCRNKDKAVELLA-LAQQ--HSNLHVIELDVTDFSKQQDVLFK 74 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~---~g~~~~~~V~~~~r~~~~~~~~~~-~~~~--~~~~~~~~~D~~~~~~~v~~~~~ 74 (248)
.|+++||||++|||+++|++|++ +| ++|++++|+.++++++.+ +... +.++.++++|++++++ ++++++
T Consensus 6 gKvalITGas~GIG~aiA~~lA~~~~~G----~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~-v~~l~~ 80 (259)
T d1oaaa_ 6 CAVCVLTGASRGFGRALAPQLARLLSPG----SVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAG-VQRLLS 80 (259)
T ss_dssp SEEEEESSCSSHHHHHHHHHHHTTBCTT----CEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHH-HHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHhcccCC----CEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHH-HHHHHH
Confidence 37999999999999999999986 67 999999999999998854 4333 2368899999999999 999999
Q ss_pred HhhhhhcC--CCccEEEeccccCCc--cccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceE
Q psy11190 75 DISDVVKD--QGLNVLVNNAGIAAK--FTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAI 150 (248)
Q Consensus 75 ~i~~~~~~--~~iD~lv~~ag~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~i 150 (248)
.+.+.... +.+|++|||||...+ ..++.+.+.++|++.+++|+.+++++++.++|.|++++. ..|+|
T Consensus 81 ~~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~---------~~g~I 151 (259)
T d1oaaa_ 81 AVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPG---------LSKTV 151 (259)
T ss_dssp HHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTT---------CEEEE
T ss_pred HHHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCC---------Ccccc
Confidence 98875321 258999999997643 356778899999999999999999999999999987521 36899
Q ss_pred EEeecCCCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC-------------------
Q psy11190 151 VNVSSIMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS------------------- 211 (248)
Q Consensus 151 v~vss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~------------------- 211 (248)
|++||.++..+. +++..|+++|+++.+|+++|+.| ++|||||+|+||+|+|+|.+.
T Consensus 152 v~isS~~~~~~~---~~~~~Y~asKaal~~lt~~la~e--~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~ 226 (259)
T d1oaaa_ 152 VNISSLCALQPY---KGWGLYCAGKAARDMLYQVLAAE--EPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKS 226 (259)
T ss_dssp EEECCGGGTSCC---TTCHHHHHHHHHHHHHHHHHHHH--CTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHH
T ss_pred cccccccccCCC---ccchHHHHHHHHHHHHHHHHHhC--CCCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHHHhcCC
Confidence 999999999887 88999999999999999999999 679999999999999997532
Q ss_pred -CCCCchhhHHHHHHHHhhhcccccccceeeeC
Q psy11190 212 -NAPLEVGAATAGIIQFIQSLGEAHNGGFFEYT 243 (248)
Q Consensus 212 -~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 243 (248)
....+|+++++.+++++++ ....+|+++++.
T Consensus 227 ~~r~~~p~evA~~i~~ll~~-~s~~TG~~idv~ 258 (259)
T d1oaaa_ 227 DGALVDCGTSAQKLLGLLQK-DTFQSGAHVDFY 258 (259)
T ss_dssp TTCSBCHHHHHHHHHHHHHH-CCSCTTEEEETT
T ss_pred CCCCCCHHHHHHHHHHHhhh-ccCCCCCeEEec
Confidence 1146899999999999976 457899998763
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.9e-41 Score=277.40 Aligned_cols=214 Identities=23% Similarity=0.240 Sum_probs=184.2
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||++|||+++|+.|+++| ++|++++|++++++++. ....+....+|+.+.+. ++. ..+.++
T Consensus 7 K~alITGas~GIG~aia~~la~~G----~~Vi~~~r~~~~l~~~~----~~~~~~~~~~d~~~~~~-~~~----~~~~~~ 73 (245)
T d2ag5a1 7 KVIILTAAAQGIGQAAALAFAREG----AKVIATDINESKLQELE----KYPGIQTRVLDVTKKKQ-IDQ----FANEVE 73 (245)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTT----CEEEEEESCHHHHGGGG----GSTTEEEEECCTTCHHH-HHH----HHHHCS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcC----CEEEEEeCCHHHHHHHH----hccCCceeeeecccccc-ccc----cccccc
Confidence 799999999999999999999999 99999999987765542 24456677777765544 444 444444
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc-
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI- 160 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~- 160 (248)
++|+||||||...+ .++.+++.++|++.+++|+.+++++++.++|.|.++ +.|+||+++|..+..
T Consensus 74 --~id~lVn~ag~~~~-~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~-----------~~g~Ii~isS~~~~~~ 139 (245)
T d2ag5a1 74 --RLDVLFNVAGFVHH-GTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQ-----------KSGNIINMSSVASSVK 139 (245)
T ss_dssp --CCSEEEECCCCCCC-BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----------TCEEEEEECCSBTTTB
T ss_pred --cceeEEecccccCC-CChhhCCHHHHHHHHHHhhccchhHHHhhCcccccC-----------CCceeeeeechhhccC
Confidence 59999999998876 888899999999999999999999999999999887 689999999988754
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC---------------------CCCchhh
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN---------------------APLEVGA 219 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~---------------------~~~~~~~ 219 (248)
+. ++...|+++|+|+++|+|+||.||+++|||||+|+||+++||+.... ...+|+|
T Consensus 140 ~~---~~~~~Y~~sKaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~ped 216 (245)
T d2ag5a1 140 GV---VNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEE 216 (245)
T ss_dssp CC---TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHH
T ss_pred Cc---cchhHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCCCCCCcCHHH
Confidence 33 77889999999999999999999999999999999999999885321 1357999
Q ss_pred HHHHHHHHhhhcccccccceeeeCCe
Q psy11190 220 ATAGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 220 ~~~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
+++.+.+++++.+...||+.+.+||.
T Consensus 217 va~~v~fL~s~~s~~iTG~~i~VDGG 242 (245)
T d2ag5a1 217 IAMLCVYLASDESAYVTGNPVIIDGG 242 (245)
T ss_dssp HHHHHHHHHSGGGTTCCSCEEEECTT
T ss_pred HHHHHHHHhChhhCCCcCceEEeCCC
Confidence 99999999999899999999999985
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=100.00 E-value=9.1e-40 Score=274.37 Aligned_cols=223 Identities=23% Similarity=0.254 Sum_probs=194.4
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHH-HHHhh-cCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELL-ALAQQ-HSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~-~~~~~-~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|++|||||++|||+++|++|+++| ++|++++|+.++++++. ++... +.++.++++|+++.++ ++.+++.+.+.
T Consensus 26 K~alITGas~GIG~aiA~~la~~G----a~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~-v~~~~~~~~~~ 100 (294)
T d1w6ua_ 26 KVAFITGGGTGLGKGMTTLLSSLG----AQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDM-VQNTVSELIKV 100 (294)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHH-HHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcC----CEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHH-HHHHhhhhhhh
Confidence 899999999999999999999999 99999999999888874 44433 4578899999999999 99999999999
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
++ ++|+||||||.... ..+...+.+++++.+.+|+.+.+.+.+...+.+.... ..+.+++++|..+.
T Consensus 101 ~g--~iDilvnnAg~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~----------~~~~i~~~ss~~~~ 167 (294)
T d1w6ua_ 101 AG--HPNIVINNAAGNFI-SPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQ----------KGAAFLSITTIYAE 167 (294)
T ss_dssp TC--SCSEEEECCCCCCC-SCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT----------CCEEEEEECCTHHH
T ss_pred cc--ccchhhhhhhhccc-cccccchhhhhhhheeeecccchhhhhhhhccccccc----------ccccccccccchhh
Confidence 88 69999999998765 7788889999999999999999999988887776542 56778888888887
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC------------------CCchhhHH
Q psy11190 160 IEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA------------------PLEVGAAT 221 (248)
Q Consensus 160 ~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~------------------~~~~~~~~ 221 (248)
.+. ++...|+++|+|+.+|++.+|.|++++|||||+|+||+++|++..... ..+|+|++
T Consensus 168 ~~~---~~~~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~pl~R~~~pediA 244 (294)
T d1w6ua_ 168 TGS---GFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELA 244 (294)
T ss_dssp HCC---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTSSCBCHHHHH
T ss_pred hcc---cccchHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCcHHHHHHHhhcCCCCCCCCHHHHH
Confidence 776 788899999999999999999999999999999999999999865432 35899999
Q ss_pred HHHHHHhhhcccccccceeeeCCe
Q psy11190 222 AGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 222 ~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
..+.+++++.+...||+.+.+||.
T Consensus 245 ~~v~fL~sd~s~~itG~~i~vDGG 268 (294)
T d1w6ua_ 245 NLAAFLCSDYASWINGAVIKFDGG 268 (294)
T ss_dssp HHHHHHTSGGGTTCCSCEEEESTT
T ss_pred HHHHHHhCchhcCCCCcEEEECCC
Confidence 999999999889999999999986
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=2.5e-39 Score=263.52 Aligned_cols=212 Identities=12% Similarity=0.089 Sum_probs=181.8
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
.|++|||||++|||+++|++|+++| ++|++++++..+. ......+.+|.++.++ ++.+.+.+.+.+
T Consensus 2 gK~vlITGas~GIG~a~a~~l~~~G----~~V~~~~~~~~~~---------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 67 (236)
T d1dhra_ 2 ARRVLVYGGRGALGSRCVQAFRARN----WWVASIDVVENEE---------ASASVIVKMTDSFTEQ-ADQVTAEVGKLL 67 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTT----CEEEEEESSCCTT---------SSEEEECCCCSCHHHH-HHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC----CEEEEEeCCcccc---------ccccceeecccCcHHH-HHHHHHHHHHHh
Confidence 4899999999999999999999999 9999999876531 2234556777777777 888888888887
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+.+++|+||||||.........+.+.++|++.|++|+.+++++++.++|.|++ .|+||++||.++..
T Consensus 68 ~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~-------------~G~Iv~isS~~~~~ 134 (236)
T d1dhra_ 68 GDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE-------------GGLLTLAGAKAALD 134 (236)
T ss_dssp TTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE-------------EEEEEEECCGGGGS
T ss_pred CCCCceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhccc-------------ccceeEEccHHHcC
Confidence 76679999999997655456677778999999999999999999999999954 58999999999987
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhcc--CCCeEEEEecCcceecCCCCCC-------CCCchhhHHHHHHHHhhhc
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLK--GDKIIATAMHPGWVKTDMGGSN-------APLEVGAATAGIIQFIQSL 231 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~--~~~i~v~~v~PG~v~t~~~~~~-------~~~~~~~~~~~~~~~~~~~ 231 (248)
+. +++..|++||+|+.+|+++|+.|++ ++|||||+|+||+++|+|.+.. ...+|++++..+.++++..
T Consensus 135 ~~---~~~~~Y~asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~pe~va~~~~~l~s~~ 211 (236)
T d1dhra_ 135 GT---PGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPEADFSSWTPLEFLVETFHDWITGN 211 (236)
T ss_dssp CC---TTBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHSTTSCGGGSEEHHHHHHHHHHHHTTT
T ss_pred Cc---cCCcccHHHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCcchhhCccchhhcCCCHHHHHHHHHHHhCCC
Confidence 76 8889999999999999999999998 6799999999999999985432 1356999999999999998
Q ss_pred ccccccceeee
Q psy11190 232 GEAHNGGFFEY 242 (248)
Q Consensus 232 ~~~~~g~~~~~ 242 (248)
....+|+++.+
T Consensus 212 ~~~i~G~~i~v 222 (236)
T d1dhra_ 212 KRPNSGSLIQV 222 (236)
T ss_dssp TCCCTTCEEEE
T ss_pred ccCCCCCeEEE
Confidence 88899987764
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.4e-38 Score=257.88 Aligned_cols=222 Identities=21% Similarity=0.180 Sum_probs=185.6
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
.|++|||||++|||+++|++|+++| ++|++++|+.++++++.+.. ..+.....+|+.+... ++.....+....
T Consensus 5 GKvalITGas~GIG~aia~~la~~G----~~V~~~~r~~~~~~~~~~~l--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 77 (248)
T d2o23a1 5 GLVAVITGGASGLGLATAERLVGQG----ASAVLLDLPNSGGEAQAKKL--GNNCVFAPADVTSEKD-VQTALALAKGKF 77 (248)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT----CEEEEEECTTSSHHHHHHHH--CTTEEEEECCTTCHHH-HHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCC----CEEEEEeCChHHHHHHHHHh--CCCccccccccccccc-cccccccccccc
Confidence 3899999999999999999999999 89999999999988775444 4577889999999988 899888888877
Q ss_pred cCCCccEEEeccccCCc-----cccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeec
Q psy11190 81 KDQGLNVLVNNAGIAAK-----FTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSS 155 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~-----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss 155 (248)
. .+|.+++|++.... ..++.+.+.++|++.+++|+.++++++++++|.|..+.... ..+.|+||++||
T Consensus 78 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~-----~~~~G~Ii~isS 150 (248)
T d2o23a1 78 G--RVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQ-----GGQRGVIINTAS 150 (248)
T ss_dssp S--CCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCT-----TSCCEEEEEECC
T ss_pred c--cccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhc-----cCCceEEEEecc
Confidence 6 58999988876543 23455678899999999999999999999999987642211 125789999999
Q ss_pred CCCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC----------------CCchhh
Q psy11190 156 IMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA----------------PLEVGA 219 (248)
Q Consensus 156 ~~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~----------------~~~~~~ 219 (248)
..+..+. +++..|+++|+|+.+|+++|+.|++++|||||+|+||+++|+|..... ..+|+|
T Consensus 151 ~~~~~~~---~~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~~R~g~pee 227 (248)
T d2o23a1 151 VAAFEGQ---VGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVCNFLASQVPFPSRLGDPAE 227 (248)
T ss_dssp THHHHCC---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC----------CHHHHTCSSSCSCBCHHH
T ss_pred hhhccCC---CCchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhcCCHHHHHHHHhcCCCCCCCcCHHH
Confidence 9998877 888999999999999999999999999999999999999999865532 247999
Q ss_pred HHHHHHHHhhhcccccccceee
Q psy11190 220 ATAGIIQFIQSLGEAHNGGFFE 241 (248)
Q Consensus 220 ~~~~~~~~~~~~~~~~~g~~~~ 241 (248)
++..+.++++ .+..||+.+.
T Consensus 228 vA~~v~fL~s--~~~itGq~I~ 247 (248)
T d2o23a1 228 YAHLVQAIIE--NPFLNGEVIR 247 (248)
T ss_dssp HHHHHHHHHH--CTTCCSCEEE
T ss_pred HHHHHHHHHh--CCCCCceEeE
Confidence 9999988875 4678999875
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.1e-38 Score=262.89 Aligned_cols=206 Identities=23% Similarity=0.283 Sum_probs=182.2
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHH-HHhh-cCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQ-HSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~-~~~~-~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|++|||||++|||+++|++|+++| ++|++++|+.++++++.+ .... ...+..+.+|+++.++ +..+.+.+.+.
T Consensus 15 K~alITGassGIG~aiA~~la~~G----~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~~~~ 89 (269)
T d1xu9a_ 15 KKVIVTGASKGIGREMAYHLAKMG----AHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTF-AEQFVAQAGKL 89 (269)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHH-HHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHH-HHHHHHHHHHH
Confidence 899999999999999999999999 999999999999998843 3332 4467889999999988 99999999998
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
++ .+|+++||||.... ..+.+.+.++|++.+++|+.+++.+++.++|.|++ ++|+||++||.++.
T Consensus 90 ~g--~~~~li~nag~~~~-~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~------------~~G~ii~isS~~~~ 154 (269)
T d1xu9a_ 90 MG--GLDMLILNHITNTS-LNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQ------------SNGSIVVVSSLAGK 154 (269)
T ss_dssp HT--SCSEEEECCCCCCC-CCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH------------HTCEEEEEEEGGGT
T ss_pred hC--Cccccccccccccc-cccccCCHHHhhhheeeehhhHHHHHHHHHHHHHh------------cCCcceEeccchhc
Confidence 88 59999999998765 77788899999999999999999999999999986 47999999999998
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHhhccC--CCeEEEEecCcceecCCCCCC-------CCCchhhHHHHHHHHhhh
Q psy11190 160 IEDNTQGGFHPYRCSKAALNAATRSLSIDLKG--DKIIATAMHPGWVKTDMGGSN-------APLEVGAATAGIIQFIQS 230 (248)
Q Consensus 160 ~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~--~~i~v~~v~PG~v~t~~~~~~-------~~~~~~~~~~~~~~~~~~ 230 (248)
.+. +++..|++||+|+.+|+++|+.|+++ .||+||+|+||+|+|+|.+.. ...+++++++.++..+..
T Consensus 155 ~~~---p~~~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~~~~~~~~~~~~~~~~~e~~a~~i~~~~~~ 231 (269)
T d1xu9a_ 155 VAY---PMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSGIVHMQAAPKEECALEIIKGGAL 231 (269)
T ss_dssp SCC---TTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHSCGGGGGGCBCHHHHHHHHHHHHHT
T ss_pred CCC---CCchHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcHHHHhccCCccccCCCHHHHHHHHHHHhhc
Confidence 887 88999999999999999999999974 579999999999999985321 246789999999887654
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=100.00 E-value=9.7e-37 Score=254.23 Aligned_cols=229 Identities=21% Similarity=0.184 Sum_probs=179.5
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecC-chhHHHHHHHH-hhc-CCcee-----------------EEe
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRN-KDKAVELLALA-QQH-SNLHV-----------------IEL 60 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~-~~~~~~~~~~~-~~~-~~~~~-----------------~~~ 60 (248)
|.++|||||++|||+++|++|+++| ++|++.+++ .+.++++.+.+ ... ..... ..+
T Consensus 2 ~pVAlITGas~GIG~aiA~~la~~G----a~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 77 (284)
T d1e7wa_ 2 VPVALVTGAAKRLGRSIAEGLHAEG----YAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSA 77 (284)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTT----CEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHcC----CEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccc
Confidence 6789999999999999999999999 899987765 44556554333 222 23333 455
Q ss_pred eccCCchhhhhHHHHhhhhhcCCCccEEEeccccCCccccCCCCChhhhh--------------heeeecchhhHHHHHH
Q psy11190 61 DVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMT--------------DHFLVNVTAPLMLTKT 126 (248)
Q Consensus 61 D~~~~~~~v~~~~~~i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~--------------~~~~~n~~~~~~l~~~ 126 (248)
|+++.++ ++++++++.+.+| ++|+||||||...+ .++.+.+.++|+ ..+.+|+.+++++++.
T Consensus 78 dv~~~~~-v~~~~~~~~~~~G--~iDiLVnnAG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~ 153 (284)
T d1e7wa_ 78 PVTLFTR-CAELVAACYTHWG--RCDVLVNNASSFYP-TPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKA 153 (284)
T ss_dssp CBCHHHH-HHHHHHHHHHHHS--CCCEEEECCCCCCC-CCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred cCCCHHH-HHHHHHHHHHHhC--CCCEEEecCCccCC-CchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeecc
Confidence 6888888 9999999999998 69999999998876 666666666555 3688999999999999
Q ss_pred HhHHHHhhhhcccCCCCCCCCceEEEeecCCCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceec
Q psy11190 127 MLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKT 206 (248)
Q Consensus 127 ~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t 206 (248)
+.+.+....... ....++|++++|.....+. +++..|+++|+|+.+|+++|++||+++|||||+|+||++.+
T Consensus 154 ~~~~~~~~~~~~-----~~~~~~ii~~~s~~~~~~~---~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~ 225 (284)
T d1e7wa_ 154 FAHRVAGTPAKH-----RGTNYSIINMVDAMTNQPL---LGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVL 225 (284)
T ss_dssp HHHHHHTSCGGG-----SCSCEEEEEECCTTTTSCC---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCC
T ss_pred ccchhhhhHHHh-----cCCCCcccccccccccCCc---cceeeeccccccchhhhHHHHHHhCCccccccccccccccc
Confidence 988765432111 1156889999999988776 88899999999999999999999999999999999998655
Q ss_pred CCCCC--------------CCCCchhhHHHHHHHHhhhcccccccceeeeCCe
Q psy11190 207 DMGGS--------------NAPLEVGAATAGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 207 ~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
....+ ....+|+|++..+++++++.+...||+.+.+||.
T Consensus 226 ~~~~~~~~~~~~~~~~pl~~R~~~peeiA~~v~fL~S~~s~~itG~~i~VDGG 278 (284)
T d1e7wa_ 226 VDDMPPAVWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGG 278 (284)
T ss_dssp GGGSCHHHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred cccCCHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhCchhcCccCCeEEECcC
Confidence 43211 1134799999999999999889999999999985
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=3.1e-36 Score=248.02 Aligned_cols=220 Identities=17% Similarity=0.233 Sum_probs=192.7
Q ss_pred ceEEEecCCC--chhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCNR--GLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~--giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|++|||||+| |||+++|+.|+++| ++|++.+|+.+..+.+.++....+.......|+++..+ +...++.+.+.
T Consensus 6 K~~lITGass~~GIG~aiA~~l~~~G----~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 80 (258)
T d1qsga_ 6 KRILVTGVASKLSIAYGIAQAMHREG----AELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDAS-IDTMFAELGKV 80 (258)
T ss_dssp CEEEECCCCSTTSHHHHHHHHHHHTT----CEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHH-HHHHHHHHHTT
T ss_pred CEEEEECCCCchhHHHHHHHHHHHcC----CEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHH-HHHHHHHhhhc
Confidence 8999999999 89999999999999 89999999977666666666667788899999999998 99999999988
Q ss_pred hcCCCccEEEeccccCCccccC-----CCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEee
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRL-----GLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVS 154 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vs 154 (248)
++ ++|++|||++.... ... +....+.|...+.+|+.+.+.+++.+.+.+.+ ++.|+++|
T Consensus 81 ~~--~~d~~v~~a~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~Ii~is 144 (258)
T d1qsga_ 81 WP--KFDGFVHSIGFAPG-DQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP-------------GSALLTLS 144 (258)
T ss_dssp CS--SEEEEEECCCCCCG-GGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE-------------EEEEEEEE
T ss_pred cc--ccceEEEeeccccc-ccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccC-------------CcEEEEec
Confidence 87 59999999988754 222 33566778899999999999999999998854 56799999
Q ss_pred cCCCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC-----------------CCch
Q psy11190 155 SIMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA-----------------PLEV 217 (248)
Q Consensus 155 s~~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~-----------------~~~~ 217 (248)
|..+..+. +....|+++|+|+++|+++++.||+++|||||+|+||+++|++..... ..+|
T Consensus 145 s~~~~~~~---~~~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~p 221 (258)
T d1qsga_ 145 YLGAERAI---PNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTI 221 (258)
T ss_dssp CGGGTSBC---TTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCH
T ss_pred chhhccCC---CCcHHHHHHHHHHHHHHHHHHHHhCccCceeecccccccccccccccchhhhHHHHHHhCCCCCCCcCH
Confidence 99888776 778899999999999999999999999999999999999999976532 3579
Q ss_pred hhHHHHHHHHhhhcccccccceeeeCCe
Q psy11190 218 GAATAGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
||++..+.+++++.....||+.+.+||.
T Consensus 222 eeia~~v~fL~s~~s~~itG~~i~vDGG 249 (258)
T d1qsga_ 222 EDVGNSAAFLCSDLSAGISGEVVHVDGG 249 (258)
T ss_dssp HHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred HHHHHHHHHHhCchhcCccCceEEECcC
Confidence 9999999999999889999999999996
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=2.8e-37 Score=251.20 Aligned_cols=211 Identities=11% Similarity=0.078 Sum_probs=174.5
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
+++|||||++|||+++|++|+++| ++|++++|+.++. ......+.+|+.+.+. .....+.+.+.+.
T Consensus 3 gkVlITGas~GIG~aia~~l~~~G----~~V~~~~~~~~~~---------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 68 (235)
T d1ooea_ 3 GKVIVYGGKGALGSAILEFFKKNG----YTVLNIDLSANDQ---------ADSNILVDGNKNWTEQ-EQSILEQTASSLQ 68 (235)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTT----EEEEEEESSCCTT---------SSEEEECCTTSCHHHH-HHHHHHHHHHHHT
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC----CEEEEEECCchhc---------ccccceeccccCchhH-HHHHHHHHHHHhc
Confidence 357999999999999999999999 9999999987641 1223445567766666 6776777777654
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
.+++|+||||||......+..+.+.+.|+..+++|+.+++++++.++|.|++ +|+|+++||..+..+
T Consensus 69 ~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~-------------~g~Iv~isS~~~~~~ 135 (235)
T d1ooea_ 69 GSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP-------------GGLLQLTGAAAAMGP 135 (235)
T ss_dssp TCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE-------------EEEEEEECCGGGGSC
T ss_pred CCCeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhccccccc-------------ceEEEEeccHHhcCC
Confidence 4479999999998665455566667889999999999999999999999954 589999999999887
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhcc--CCCeEEEEecCcceecCCCCCCC-------CCchhhHHHHHHHHhhhc-
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLK--GDKIIATAMHPGWVKTDMGGSNA-------PLEVGAATAGIIQFIQSL- 231 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~--~~~i~v~~v~PG~v~t~~~~~~~-------~~~~~~~~~~~~~~~~~~- 231 (248)
. +++..|+++|+|+.+|+++|+.|++ +.||+||+|+||+++|+|.+... ..+|+++++.++.++...
T Consensus 136 ~---~~~~~Y~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~~~~~~~~~~~~~~~~~~~va~~~~~~l~~~~ 212 (235)
T d1ooea_ 136 T---PSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMPNADHSSWTPLSFISEHLLKWTTETS 212 (235)
T ss_dssp C---TTBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHSTTCCGGGCBCHHHHHHHHHHHHHCGG
T ss_pred c---ccccchHHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCcchhhhCcCCccccCCCHHHHHHHHHHHhcCcc
Confidence 7 8899999999999999999999998 57999999999999999854322 357899999998877664
Q ss_pred ccccccceeee
Q psy11190 232 GEAHNGGFFEY 242 (248)
Q Consensus 232 ~~~~~g~~~~~ 242 (248)
.+..+|+++.+
T Consensus 213 ~~~~tG~~i~v 223 (235)
T d1ooea_ 213 SRPSSGALLKI 223 (235)
T ss_dssp GCCCTTCEEEE
T ss_pred ccCCCceEEEE
Confidence 45689998877
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=1.7e-36 Score=258.07 Aligned_cols=222 Identities=16% Similarity=0.119 Sum_probs=182.1
Q ss_pred ceEEEec--CCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhc-C------------CceeE--------
Q psy11190 2 KSILITG--CNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQH-S------------NLHVI-------- 58 (248)
Q Consensus 2 k~~lVtG--as~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~-~------------~~~~~-------- 58 (248)
|++|||| +++|||+++|+.|+++| ++|++.+++.............. . .....
T Consensus 3 kVAlITGaa~s~GIG~aiA~~la~~G----A~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (329)
T d1uh5a_ 3 DICFIAGIGDTNGYGWGIAKELSKRN----VKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDT 78 (329)
T ss_dssp CEEEEECCSSSSSHHHHHHHHHHHTT----CEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSS
T ss_pred cEEEEeCCCCCChHHHHHHHHHHHcC----CEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehh
Confidence 7999999 66899999999999999 89999998876544432221110 0 01122
Q ss_pred ------------EeeccCCchhhhhHHHHhhhhhcCCCccEEEeccccCCcc-ccCCCCChhhhhheeeecchhhHHHHH
Q psy11190 59 ------------ELDVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKF-TRLGLLKPEQMTDHFLVNVTAPLMLTK 125 (248)
Q Consensus 59 ------------~~D~~~~~~~v~~~~~~i~~~~~~~~iD~lv~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~ 125 (248)
.+|+++.++ ++.+++.+.+.+| ++|+||||||...+. .++.+.+.++|++.+++|+++.+.++|
T Consensus 79 ~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~~~~~G--~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k 155 (329)
T d1uh5a_ 79 ANDIDEETKNNKRYNMLQNYT-IEDVANLIHQKYG--KINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCK 155 (329)
T ss_dssp GGGCCHHHHTSHHHHTCCCCS-HHHHHHHHHHHHC--CEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred hcccchhhhhhhhhhhhhHHH-HHHHHHHHHHHhC--CCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHH
Confidence 346778888 9999999999998 699999999976542 467788999999999999999999999
Q ss_pred HHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcccccCCCC-CccchhhHHHHHHHHHHHHhhccC-CCeEEEEecCcc
Q psy11190 126 TMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGG-FHPYRCSKAALNAATRSLSIDLKG-DKIIATAMHPGW 203 (248)
Q Consensus 126 ~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~~~~~~~-~~~y~~sK~a~~~~~~~la~e~~~-~~i~v~~v~PG~ 203 (248)
+++|+|.+ .|+||++||..+..+. ++ ...|+++|+++++|+++|+.||++ +|||||+|+||+
T Consensus 156 ~~~~~m~~-------------~GsIv~iss~~~~~~~---p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~ 219 (329)
T d1uh5a_ 156 YFVNIMKP-------------QSSIISLTYHASQKVV---PGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGP 219 (329)
T ss_dssp HHGGGEEE-------------EEEEEEEECGGGTSCC---TTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECC
T ss_pred HHHhhccc-------------ccccccceeehhcccc---cccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCc
Confidence 99999954 5889999999888776 54 457999999999999999999986 699999999999
Q ss_pred eecCCCCC------------------------------------------------------------CCCCchhhHHHH
Q psy11190 204 VKTDMGGS------------------------------------------------------------NAPLEVGAATAG 223 (248)
Q Consensus 204 v~t~~~~~------------------------------------------------------------~~~~~~~~~~~~ 223 (248)
++|+..+. ....+|+|++..
T Consensus 220 i~T~a~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~~~pedvA~~ 299 (329)
T d1uh5a_ 220 LKSRAATAINKLNNTYENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSV 299 (329)
T ss_dssp CCCTTGGGCC------------------------------------------CHHHHHHHHHHHHSSSCSCCCHHHHHHH
T ss_pred ccchhhhcccchhhhhhhhhhhhhccccccccccccccccccchhhhhhhcccchHHHHHHHhccCCCCCCcCHHHHHHH
Confidence 99942111 013579999999
Q ss_pred HHHHhhhcccccccceeeeCCee
Q psy11190 224 IIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 224 ~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
+++++++.+...||+.+.+||..
T Consensus 300 v~fLaSd~s~~iTGq~i~VDGG~ 322 (329)
T d1uh5a_ 300 ASFLLSRESRAITGQTIYVDNGL 322 (329)
T ss_dssp HHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHhCchhCCccCCeEEECCCc
Confidence 99999999999999999999963
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=6.8e-36 Score=243.31 Aligned_cols=216 Identities=20% Similarity=0.206 Sum_probs=179.4
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||++|||+++|++|+++| ++|++++|+.+. .+...+++|+++... +..+.....+...
T Consensus 2 K~alITGas~GIG~aiA~~la~~G----a~V~i~~~~~~~-----------~~~~~~~~d~~~~~~-~~~~~~~~~~~~~ 65 (241)
T d1uaya_ 2 RSALVTGGASGLGRAAALALKARG----YRVVVLDLRREG-----------EDLIYVEGDVTREED-VRRAVARAQEEAP 65 (241)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHT----CEEEEEESSCCS-----------SSSEEEECCTTCHHH-HHHHHHHHHHHSC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC----CEEEEEECCccc-----------ccceEeeccccchhh-hHHHHHhhhcccc
Confidence 899999999999999999999999 999999998653 356778999999888 7777777766554
Q ss_pred CCCccEEEeccccCCc---cccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 82 DQGLNVLVNNAGIAAK---FTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
.|.++++++.... .......+.+.|++.+++|+.+.+.+++.+++.+..... -...+.|+||++||..+
T Consensus 66 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-----~~~~~~G~Ii~isS~~~ 137 (241)
T d1uaya_ 66 ---LFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPP-----DAEGQRGVIVNTASVAA 137 (241)
T ss_dssp ---EEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCC-----CTTSCSEEEEEECCTHH
T ss_pred ---ccchhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhh-----hcccCceeeeeecchhh
Confidence 6777777765433 234455678899999999999999999999998655321 11125799999999999
Q ss_pred cccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC----------------CCchhhHHH
Q psy11190 159 SIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA----------------PLEVGAATA 222 (248)
Q Consensus 159 ~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~----------------~~~~~~~~~ 222 (248)
..+. ++...|+++|+|+.+|+++|+.||+++|||||+|+||+++|++..... ..+|+|++.
T Consensus 138 ~~~~---~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~R~g~pedvA~ 214 (241)
T d1uaya_ 138 FEGQ---IGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKAKASLAAQVPFPPRLGRPEEYAA 214 (241)
T ss_dssp HHCC---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHHHHHHHHTTCCSSCSCCCHHHHHH
T ss_pred ccCC---CCchhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchhhhhHHHHHHhcCCCCCCCcCHHHHHH
Confidence 8877 889999999999999999999999999999999999999999754422 348999999
Q ss_pred HHHHHhhhcccccccceeeeCCee
Q psy11190 223 GIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 223 ~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
.+.+++++ ...||+.+.+||..
T Consensus 215 ~v~fL~s~--~~iTG~~i~VDGG~ 236 (241)
T d1uaya_ 215 LVLHILEN--PMLNGEVVRLDGAL 236 (241)
T ss_dssp HHHHHHHC--TTCCSCEEEESTTC
T ss_pred HHHHHHhC--CCCCCCEEEECCcc
Confidence 99998873 67999999999963
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=100.00 E-value=1.7e-34 Score=239.65 Aligned_cols=224 Identities=20% Similarity=0.214 Sum_probs=171.4
Q ss_pred ceEEEecCCC--chhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCNR--GLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~--giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|++|||||+| |||+++|++|+++| ++|++++|+.+..+.+.++.+......+.++|+++.++ ++.+++++.+.
T Consensus 6 K~alITGaag~~GIG~AiA~~la~~G----a~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-~~~~~~~~~~~ 80 (274)
T d2pd4a1 6 KKGLIVGVANNKSIAYGIAQSCFNQG----ATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEH-FKSLYNSVKKD 80 (274)
T ss_dssp CEEEEECCCSTTSHHHHHHHHHHTTT----CEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHH-HHHHHHHHHHH
T ss_pred CEEEEECCCCCcHHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhh-HHHHHHHHHHH
Confidence 7999999765 99999999999999 99999999966555556777777788899999999999 99999999999
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
++ ++|++|||+|.........+...+.++.... +....+.........+.+... ..+.|+++++....
T Consensus 81 ~g--~id~lV~nag~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~---------~~~~i~~~s~~~~~ 148 (274)
T d2pd4a1 81 LG--SLDFIVHSVAFAPKEALEGSLLETSKSAFNT-AMEISVYSLIELTNTLKPLLN---------NGASVLTLSYLGST 148 (274)
T ss_dssp TS--CEEEEEECCCCCCGGGGSSCGGGCCHHHHHH-HHHHHTHHHHHHHHHHGGGEE---------EEEEEEEEECGGGT
T ss_pred cC--CCCeEEeecccccccccccccccccchhhhh-hhccccccccccccccccccc---------cCcceeeecccccc
Confidence 88 5999999999876533333332233333322 222322222222222222110 23445555555555
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC-----------------CCchhhHHH
Q psy11190 160 IEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA-----------------PLEVGAATA 222 (248)
Q Consensus 160 ~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~-----------------~~~~~~~~~ 222 (248)
.+. +....|+++|+++.+|+++++.|++++|||||+|+||+++|++..... ..+|+|++.
T Consensus 149 ~~~---~~~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedIA~ 225 (274)
T d2pd4a1 149 KYM---AHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGN 225 (274)
T ss_dssp SBC---TTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHH
T ss_pred ccc---ccchhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCchHHHHHHHhhhhhccCCcCHHHHHH
Confidence 444 667889999999999999999999999999999999999999875432 468999999
Q ss_pred HHHHHhhhcccccccceeeeCCe
Q psy11190 223 GIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 223 ~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
.+.+++++.....||+.+.+||.
T Consensus 226 ~v~fL~S~~s~~itG~~i~vDGG 248 (274)
T d2pd4a1 226 AGMYLLSSLSSGVSGEVHFVDAG 248 (274)
T ss_dssp HHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHHhChhhCCCcCceEEECCC
Confidence 99999999899999999999985
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=100.00 E-value=5e-34 Score=235.45 Aligned_cols=229 Identities=21% Similarity=0.212 Sum_probs=177.2
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhH-HHHH-HHHhh-cCCceeEEeeccCCch---hhhhHHHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKA-VELL-ALAQQ-HSNLHVIELDVTDFSK---QQDVLFKD 75 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~-~~~~-~~~~~-~~~~~~~~~D~~~~~~---~v~~~~~~ 75 (248)
.|+|||||++|||+++|++|+++| ++|++++|+.++. +++. ++... ..+....++|+.+..+ .++.+++.
T Consensus 2 ~vAlVTGas~GIG~aia~~la~~G----~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (266)
T d1mxha_ 2 PAAVITGGARRIGHSIAVRLHQQG----FRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDC 77 (266)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTT----CEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC----CEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHH
Confidence 489999999999999999999999 9999999997654 4443 33333 3466677777655433 25677777
Q ss_pred hhhhhcCCCccEEEeccccCCccccCCC-----------CChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCC
Q psy11190 76 ISDVVKDQGLNVLVNNAGIAAKFTRLGL-----------LKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLG 144 (248)
Q Consensus 76 i~~~~~~~~iD~lv~~ag~~~~~~~~~~-----------~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~ 144 (248)
+.+.+| ++|+||||||+..+ ..+.+ ...+.+...+..|+.+.+...+...+.+.......
T Consensus 78 ~~~~~g--~iDilvnnAG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 148 (266)
T d1mxha_ 78 SFRAFG--RCDVLVNNASAYYP-TPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWR------ 148 (266)
T ss_dssp HHHHHS--CCCEEEECCCCCCC-CCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------------
T ss_pred HHHHhC--CCCEEEECCccCCC-Ccccccccccchhcccccccccccccccccccccchhhhhccccccccccc------
Confidence 888887 59999999998765 33222 22344666777888888888887777765532211
Q ss_pred CCCceEEEeecCCCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC-----------
Q psy11190 145 SSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA----------- 213 (248)
Q Consensus 145 ~~~~~iv~vss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~----------- 213 (248)
...+.++++++..+..+. +++..|++||+++++|+++++.+++++|||||+|+||+++|++..+..
T Consensus 149 ~~~~~~~~~~~~~~~~~~---~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~~~pl 225 (266)
T d1mxha_ 149 SRNLSVVNLCDAMTDLPL---PGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMPQETQEEYRRKVPL 225 (266)
T ss_dssp CCCEEEEEECCGGGGSCC---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSCHHHHHHHHTTCTT
T ss_pred cccccchhhhhccccccC---cchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccCCHHHHHHHHhcCCC
Confidence 145778888888887666 889999999999999999999999999999999999999998765411
Q ss_pred ---CCchhhHHHHHHHHhhhcccccccceeeeCCee
Q psy11190 214 ---PLEVGAATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 214 ---~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
..+|+|++..+++++++.....||+.+.+||..
T Consensus 226 ~r~~~~peeva~~v~fL~s~~s~~itG~~i~vDGG~ 261 (266)
T d1mxha_ 226 GQSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGL 261 (266)
T ss_dssp TSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred CCCCCCHHHHHHHHHHHhCchhCCccCCeEEECccH
Confidence 248999999999999998899999999999963
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=100.00 E-value=8.2e-34 Score=237.89 Aligned_cols=222 Identities=16% Similarity=0.151 Sum_probs=177.7
Q ss_pred ceEEEecCCC--chhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcC------------Cc-eeEEee-----
Q psy11190 2 KSILITGCNR--GLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHS------------NL-HVIELD----- 61 (248)
Q Consensus 2 k~~lVtGas~--giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~------------~~-~~~~~D----- 61 (248)
|++|||||+| |||+++|+.|+++| ++|++.+|+............... .. ....+|
T Consensus 9 K~alVTGass~~GIG~aiA~~la~~G----a~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (297)
T d1d7oa_ 9 KRAFIAGIADDNGYGWAVAKSLAAAG----AEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDN 84 (297)
T ss_dssp CEEEEECCSSSSSHHHHHHHHHHHTT----CEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCS
T ss_pred CEEEEECCCCCchHHHHHHHHHHHCC----CEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhccc
Confidence 8999999876 99999999999999 999999998654333322211100 00 122233
Q ss_pred ---------------ccCCchhhhhHHHHhhhhhcCCCccEEEeccccCCc-cccCCCCChhhhhheeeecchhhHHHHH
Q psy11190 62 ---------------VTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAK-FTRLGLLKPEQMTDHFLVNVTAPLMLTK 125 (248)
Q Consensus 62 ---------------~~~~~~~v~~~~~~i~~~~~~~~iD~lv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~ 125 (248)
.++... ++++++.+.+.+| ++|+||||||.... ..++.+.+.++|++.+++|+.+++++++
T Consensus 85 ~~~~~~dv~~~~~~~~~~~~~-~~~~~~~~~~~~G--~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~ 161 (297)
T d1d7oa_ 85 PEDVPEDVKANKRYAGSSNWT-VQEAAECVRQDFG--SIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLS 161 (297)
T ss_dssp GGGSCHHHHTSHHHHHCCCCS-HHHHHHHHHHHHS--CEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred cccchhhhhhhhhhhhccHHH-HHHHHHHHHHHhC--CCcccccccccccccccchhhhhcccccccccchhhhhhhhhh
Confidence 355666 7899999999998 69999999997642 3567888999999999999999999999
Q ss_pred HHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcccccCCCCCccchhhHHHHHHHHHHHHhhcc-CCCeEEEEecCcce
Q psy11190 126 TMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLK-GDKIIATAMHPGWV 204 (248)
Q Consensus 126 ~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~-~~~i~v~~v~PG~v 204 (248)
++++.+.+ .+.++++++....... .+....|+++|+++..+++.++.++. ++|||||+|+||++
T Consensus 162 ~~~~~~~~-------------~g~~~~~~~~~~~~~~--~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i 226 (297)
T d1d7oa_ 162 HFLPIMNP-------------GGASISLTYIASERII--PGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPL 226 (297)
T ss_dssp HHGGGEEE-------------EEEEEEEECGGGTSCC--TTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCC
T ss_pred HHHHHhhc-------------CCcceeeeehhhcccc--cccccceecccccccccccccchhccccceEEecccccccc
Confidence 99998865 4556666655544332 15667899999999999999999996 67999999999999
Q ss_pred ecCCCCCCC-----------------CCchhhHHHHHHHHhhhcccccccceeeeCCe
Q psy11190 205 KTDMGGSNA-----------------PLEVGAATAGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 205 ~t~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
+|++.+... ..+|+|++..+.+++++.+...||+.+.+||.
T Consensus 227 ~T~~~~~~~~~~~~~~~~~~~~PlgR~~~peevA~~v~fL~S~~a~~itGq~i~vDGG 284 (297)
T d1d7oa_ 227 GSRAAKAIGFIDTMIEYSYNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNG 284 (297)
T ss_dssp BCCCSSCCSHHHHHHHHHHHHSSSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred cchhhhhccCCHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCchhcCCcCceEEECcC
Confidence 999987632 35799999999999999999999999999986
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=100.00 E-value=1.5e-33 Score=232.97 Aligned_cols=220 Identities=13% Similarity=0.166 Sum_probs=181.4
Q ss_pred ceEEEec--CCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH-HHHHhhcCCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 2 KSILITG--CNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL-LALAQQHSNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 2 k~~lVtG--as~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
|++|||| +++|||+++|++|+++| ++|++++|+.+++.+. .+. ...+...+++|+++.++ +..+++.+.+
T Consensus 7 K~~lItGaag~~GIG~aiA~~la~~G----a~Vil~~~~~~~~~~~~~~~--~~~~~~~~~~dv~~~~~-~~~~~~~v~~ 79 (268)
T d2h7ma1 7 KRILVSGIITDSSIAFHIARVAQEQG----AQLVLTGFDRLRLIQRITDR--LPAKAPLLELDVQNEEH-LASLAGRVTE 79 (268)
T ss_dssp CEEEECCCSSTTCHHHHHHHHHHHTT----CEEEEEECSCHHHHHHHHTT--SSSCCCEEECCTTCHHH-HHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHcC----CEEEEEeCChHHHHHHHHHH--cCCceeeEeeecccccc-cccccchhhh
Confidence 7999999 46799999999999999 8999999998765332 222 24577889999999999 9999999998
Q ss_pred hhcCC-CccEEEeccccCCc----cccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEe
Q psy11190 79 VVKDQ-GLNVLVNNAGIAAK----FTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNV 153 (248)
Q Consensus 79 ~~~~~-~iD~lv~~ag~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~v 153 (248)
.++.. ++|+++||+|+... ..++.+.+.+++.+.+.+|+...+...+...+.+. .+.++++
T Consensus 80 ~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~i~~ 145 (268)
T d2h7ma1 80 AIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMN--------------PGGSIVG 145 (268)
T ss_dssp HHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEE--------------EEEEEEE
T ss_pred ccccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhcc--------------ccccccc
Confidence 87653 59999999997643 23445678899999999999999998888877643 3345556
Q ss_pred ecCCCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC----------------------
Q psy11190 154 SSIMGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS---------------------- 211 (248)
Q Consensus 154 ss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~---------------------- 211 (248)
+|.....+. +.+..|+++|+++.+|++++++||+++|||||+|+||+++|+++..
T Consensus 146 ~s~~~~~~~---p~~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (268)
T d2h7ma1 146 MDFDPSRAM---PAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWD 222 (268)
T ss_dssp EECCCSSCC---TTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHH
T ss_pred ccccccccC---cccchhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHH
Confidence 666655555 7788999999999999999999999999999999999999986421
Q ss_pred ------CCCCchhhHHHHHHHHhhhcccccccceeeeCCe
Q psy11190 212 ------NAPLEVGAATAGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 212 ------~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
....+|+|+++.+.+++++.....||+.+.+||.
T Consensus 223 ~~~pl~rr~~~p~dva~~v~fL~Sd~a~~iTG~~i~vDGG 262 (268)
T d2h7ma1 223 QRAPIGWNMKDATPVAKTVCALLSDWLPATTGDIIYADGG 262 (268)
T ss_dssp HHCTTCCCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTT
T ss_pred hcCCCCCCCCCHHHHHHHHHHHhCchhcCccCCEEEECcC
Confidence 0135799999999999998889999999999985
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.98 E-value=2e-32 Score=224.77 Aligned_cols=202 Identities=24% Similarity=0.311 Sum_probs=153.8
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
||++|||||++|||+++|++|+++| ++|++++|+.++ ...|+++... .+.....+....
T Consensus 1 mkVvlITGas~GIG~aiA~~la~~G----a~V~~~~~~~~~----------------~~~d~~~~~~-~~~~~~~~~~~~ 59 (257)
T d1fjha_ 1 MSIIVISGCATGIGAATRKVLEAAG----HQIVGIDIRDAE----------------VIADLSTAEG-RKQAIADVLAKC 59 (257)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT----CEEEEEESSSSS----------------EECCTTSHHH-HHHHHHHHHTTC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCC----CEEEEEECChHH----------------HHHHhcCHHH-HHHHHHHHHHHh
Confidence 9999999999999999999999999 899999998643 3578888777 666655555443
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC--
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG-- 158 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~-- 158 (248)
.. .+|++|+|||.... .+.+.....+|+.+...+.+..++.+.+. ....+.++++...
T Consensus 60 ~~-~id~lv~~Ag~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~ 119 (257)
T d1fjha_ 60 SK-GMDGLVLCAGLGPQ--------TKVLGNVVSVNYFGATELMDAFLPALKKG-----------HQPAAVVISSVASAH 119 (257)
T ss_dssp TT-CCSEEEECCCCCTT--------CSSHHHHHHHHTHHHHHHHHHHHHHHHTS-----------SSCEEEEECCGGGGS
T ss_pred CC-CCcEEEEcCCCCCc--------HHHHHHHHHHHHHHHHHHHHHhhhhhhhh-----------ccCcceeeeeccccc
Confidence 31 59999999987532 34567778889999999999999988774 3444444444322
Q ss_pred -------------------------cccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC
Q psy11190 159 -------------------------SIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA 213 (248)
Q Consensus 159 -------------------------~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~ 213 (248)
..+. .++...|+++|+|+.+|+++|+.||+++|||||+|+||+++|++.+...
T Consensus 120 ~~~~~~~~~~~~~~g~~~~i~s~~~~~~~--~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~ 197 (257)
T d1fjha_ 120 LAFDKNPLALALEAGEEAKARAIVEHAGE--QGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGL 197 (257)
T ss_dssp SCGGGCTTHHHHHHTCHHHHHHHHHTCCT--THHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC----------
T ss_pred hhhhhhhhhhhccCCcEEEEeeehhccCC--CcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhc
Confidence 2111 1234469999999999999999999999999999999999999865421
Q ss_pred ------------------CCchhhHHHHHHHHhhhcccccccceeeeCCe
Q psy11190 214 ------------------PLEVGAATAGIIQFIQSLGEAHNGGFFEYTGK 245 (248)
Q Consensus 214 ------------------~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~ 245 (248)
..+|+|++..+.+++++.+...||+.+.+||.
T Consensus 198 ~~~~~~~~~~~~~~PlgR~g~p~eva~~v~fL~S~~s~~itG~~i~vDGG 247 (257)
T d1fjha_ 198 QDPRYGESIAKFVPPMGRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGG 247 (257)
T ss_dssp -----------CCCSTTSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred CCHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCchhCCccCceEEeCCC
Confidence 24799999999999999999999999999996
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.97 E-value=2.2e-31 Score=218.98 Aligned_cols=201 Identities=22% Similarity=0.214 Sum_probs=163.2
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCch---hHHHH-HHHHhhcCCceeEEeeccCCchhhhhHHHHhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKD---KAVEL-LALAQQHSNLHVIELDVTDFSKQQDVLFKDIS 77 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~---~~~~~-~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~ 77 (248)
+|+|||||++|||+++|++|+++|+ .+|++++|+.. ..+++ .++...+.++.++.+|++|.++ ++.+++.+.
T Consensus 10 gt~lVTGgs~GIG~a~a~~la~~Ga---~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~-~~~~~~~i~ 85 (259)
T d2fr1a1 10 GTVLVTGGTGGVGGQIARWLARRGA---PHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRES-VRELLGGIG 85 (259)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHTC---SEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHH-HHHHHHTSC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCC---CEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHH-HHHhhcccc
Confidence 5899999999999999999999993 37999998753 34444 3344445679999999999999 999999887
Q ss_pred hhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCC
Q psy11190 78 DVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIM 157 (248)
Q Consensus 78 ~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~ 157 (248)
+.. ++|.||||+|.... .++.+.+.++|+..+++|+.+.+++.+.+.+. +.++||++||.+
T Consensus 86 ~~~---~i~~vv~~ag~~~~-~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~---------------~~~~iv~~SS~a 146 (259)
T d2fr1a1 86 DDV---PLSAVFHAAATLDD-GTVDTLTGERIERASRAKVLGARNLHELTREL---------------DLTAFVLFSSFA 146 (259)
T ss_dssp TTS---CEEEEEECCCCCCC-CCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTS---------------CCSEEEEEEEHH
T ss_pred ccc---cccccccccccccc-cccccccHHHHHHHhhhhccchhHHHHHhhcc---------------CCceEeeecchh
Confidence 753 49999999999876 78888999999999999999999987764332 578999999999
Q ss_pred CcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecC-CCCC----------CCCCchhhHHHHHHH
Q psy11190 158 GSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTD-MGGS----------NAPLEVGAATAGIIQ 226 (248)
Q Consensus 158 ~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~-~~~~----------~~~~~~~~~~~~~~~ 226 (248)
+..+. +++..|+++|+++++|++.++ ..|+++++|+||++.++ |... ..+++|+++++.+..
T Consensus 147 ~~~g~---~~~~~YaAaka~l~~la~~~~----~~Gi~v~~I~pg~~~~~g~~~~~~~~~~~~~G~~~~~~~~~~~~l~~ 219 (259)
T d2fr1a1 147 SAFGA---PGLGGYAPGNAYLDGLAQQRR----SDGLPATAVAWGTWAGSGMAEGPVADRFRRHGVIEMPPETACRALQN 219 (259)
T ss_dssp HHTCC---TTCTTTHHHHHHHHHHHHHHH----HTTCCCEEEEECCBC------------CTTTTEECBCHHHHHHHHHH
T ss_pred hccCC---cccHHHHHHHHhHHHHHHHHH----hCCCCEEECCCCcccCCccccchHHHHHHhcCCCCCCHHHHHHHHHH
Confidence 99888 889999999999999887776 45899999999987543 3222 125789999999988
Q ss_pred Hhhhcc
Q psy11190 227 FIQSLG 232 (248)
Q Consensus 227 ~~~~~~ 232 (248)
.+....
T Consensus 220 ~l~~~~ 225 (259)
T d2fr1a1 220 ALDRAE 225 (259)
T ss_dssp HHHTTC
T ss_pred HHhCCC
Confidence 887643
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=99.79 E-value=7.5e-19 Score=149.80 Aligned_cols=175 Identities=14% Similarity=0.035 Sum_probs=125.5
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCch-----hHHHH-HHHHhhcCCceeEEeeccCCchhhhhHHHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKD-----KAVEL-LALAQQHSNLHVIELDVTDFSKQQDVLFKD 75 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~-----~~~~~-~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~ 75 (248)
|+||||||||.||.+++++|+++| +.|+.++|... +++.+ .+......++.++++|++|.++ ++++++.
T Consensus 2 K~vLITGatGfiGs~lv~~Ll~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~-~~~~~~~ 76 (357)
T d1db3a_ 2 KVALITGVTGQDGSYLAEFLLEKG----YEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSN-LTRILRE 76 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT----CEEEEECC---------------------CCEEECCCCSSCHHH-HHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCc----CEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHH-HHHHHhc
Confidence 899999999999999999999999 99999999543 33333 1222335589999999999888 7776554
Q ss_pred hhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeec
Q psy11190 76 ISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSS 155 (248)
Q Consensus 76 i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss 155 (248)
+. +|+++|+|+.... ..+.++.+..+++|+.++.++++++...-.+ ...++|++||
T Consensus 77 ~~-------~d~v~h~aa~~~~-----~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~------------~~~r~i~~SS 132 (357)
T d1db3a_ 77 VQ-------PDEVYNLGAMSHV-----AVSFESPEYTADVDAMGTLRLLEAIRFLGLE------------KKTRFYQAST 132 (357)
T ss_dssp HC-------CSEEEECCCCCTT-----TTTTSCHHHHHHHHTHHHHHHHHHHHHTTCT------------TTCEEEEEEE
T ss_pred cC-------CCEEEEeeccccc-----chhhhCHHHHHHHHHHHHHHHHHHHHHhCCC------------CCcEEEEEEc
Confidence 33 8999999998654 2234556667889999999998887554222 3467999998
Q ss_pred CCCcccc--------cCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCC
Q psy11190 156 IMGSIED--------NTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208 (248)
Q Consensus 156 ~~~~~~~--------~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~ 208 (248)
.+.+-.. .+..+...|+.+|.+.+.+++.+++.+ ++++..+.|+.+..|.
T Consensus 133 ~~vYG~~~~~~~~E~~~~~P~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~vyGp~ 190 (357)
T d1db3a_ 133 SELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESY---GMYACNGILFNHESPR 190 (357)
T ss_dssp GGGGTTCCSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTT
T ss_pred hhhhCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCCEEEEEeccccCCC
Confidence 6533111 012245679999999999999988764 5888889988887774
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=99.76 E-value=2.7e-20 Score=145.45 Aligned_cols=151 Identities=16% Similarity=0.153 Sum_probs=109.6
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|+++||||++|||+++++.|+++| ++|++++|+.++++++.+......++.+..+|+++.++ ++++ ++
T Consensus 24 K~vlItGasgGIG~~ia~~la~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~-------~~ 91 (191)
T d1luaa1 24 KKAVVLAGTGPVGMRSAALLAGEG----AEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDAS-RAEA-------VK 91 (191)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT----CEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHH-HHHH-------TT
T ss_pred CEEEEECCCHHHHHHHHHHHHhhc----cchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHH-HHHH-------hc
Confidence 799999999999999999999999 99999999999998886666556677889999999877 4443 34
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|+||||||... ..++.++|+..+.+|+.+.++....+.+.+.... ..++++..++..+..+
T Consensus 92 --~iDilin~Ag~g~-----~~~~~e~~~~~~~~nv~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~g~~~ 154 (191)
T d1luaa1 92 --GAHFVFTAGAIGL-----ELLPQAAWQNESSIEIVADYNAQPPLGIGGIDAT----------DKGKEYGGKRAFGALG 154 (191)
T ss_dssp --TCSEEEECCCTTC-----CCBCHHHHHTCTTCCEEEECCCSSSCSBTTCCTT----------CEEEEETTEEEECHHH
T ss_pred --CcCeeeecCcccc-----ccCCHHHHHhhhcceeehhHhhHHHHHHHhhhhc----------cCcEEecceEEEeccC
Confidence 4999999998643 3568899999999999888876655433332210 1222222222222111
Q ss_pred ccCCCCCccchhhHHHHHHHHHHH
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSL 185 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~l 185 (248)
.+...|+.+|+++..|+++.
T Consensus 155 ----~g~~~y~~sk~a~~~l~~s~ 174 (191)
T d1luaa1 155 ----IGGLKLKLHRACIAKLFESS 174 (191)
T ss_dssp ----HHHHHHHHHHHHHHHHTSCS
T ss_pred ----cCcHHHHHHHHHHHHHHhcC
Confidence 12346999999988877543
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=99.74 E-value=7.9e-18 Score=142.20 Aligned_cols=193 Identities=15% Similarity=0.054 Sum_probs=135.3
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH-HH-HHhhcCCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL-LA-LAQQHSNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~-~~-~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
|| +|||||+|.||+++++.|+++| +.|++++|........ .. ......++.++++|++|.+. +..+++..
T Consensus 1 MK-iLItG~tGfIG~~l~~~L~~~g----~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~-l~~~~~~~-- 72 (338)
T d1udca_ 1 MR-VLVTGGSGYIGSHTCVQLLQNG----HDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEAL-MTEILHDH-- 72 (338)
T ss_dssp CE-EEEETTTSHHHHHHHHHHHHTT----CEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHH-HHHHHHHT--
T ss_pred CE-EEEECCCCHHHHHHHHHHHHCc----CEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHH-HHHHHhcc--
Confidence 77 9999999999999999999999 8999998743321111 11 11124589999999999877 55544332
Q ss_pred hhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 79 VVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
++|+|||+|+.... ..+.++....+++|+.++.++++++... +-.++|++||.+.
T Consensus 73 -----~~d~ViHlAa~~~~-----~~~~~~~~~~~~~Nv~gt~nlL~~~~~~---------------~v~~~i~~Ss~~v 127 (338)
T d1udca_ 73 -----AIDTVIHFAGLKAV-----GESVQKPLEYYDNNVNGTLRLISAMRAA---------------NVKNFIFSSSATV 127 (338)
T ss_dssp -----TCSEEEECCSCCCH-----HHHHHCHHHHHHHHHHHHHHHHHHHHHH---------------TCCEEEEEEEGGG
T ss_pred -----CCCEEEECCCccch-----hhHHhCHHHHHHhHHHHHHHHHHHHHHh---------------CCCEEEecCcceE
Confidence 39999999986532 1233455678889999999988877654 3457899988775
Q ss_pred ccccc---------CCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC----CCchhhHHHHHH
Q psy11190 159 SIEDN---------TQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA----PLEVGAATAGII 225 (248)
Q Consensus 159 ~~~~~---------~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~----~~~~~~~~~~~~ 225 (248)
..+.. ...+...|+.+|.+.+.+.+....+. .++.+..+.|+.+..+...... ...+......++
T Consensus 128 y~~~~~~~~~e~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~ 205 (338)
T d1udca_ 128 YGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIA 205 (338)
T ss_dssp GCSCCSSSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHHS--TTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHH
T ss_pred EccccccccccccccCCCcchHHHHHhhhhHHHHHHHhhc--cCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHH
Confidence 53221 11245679999999999998888773 4789999999999887543322 122344555555
Q ss_pred HHh
Q psy11190 226 QFI 228 (248)
Q Consensus 226 ~~~ 228 (248)
..+
T Consensus 206 ~~~ 208 (338)
T d1udca_ 206 QVA 208 (338)
T ss_dssp HHH
T ss_pred HHH
Confidence 444
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.68 E-value=2.6e-16 Score=132.77 Aligned_cols=199 Identities=13% Similarity=0.004 Sum_probs=135.8
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCch-----hHHHHHH--HHhhcCCceeEEeeccCCchhhhhHH
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKD-----KAVELLA--LAQQHSNLHVIELDVTDFSKQQDVLF 73 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~-----~~~~~~~--~~~~~~~~~~~~~D~~~~~~~v~~~~ 73 (248)
+|+||||||+|.||.+++++|+++| +.|+.++|... .++.+.. ......++.++.+|++|.+. +..++
T Consensus 1 kKI~LVTG~tGfIG~~l~~~Ll~~g----~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~-~~~~~ 75 (347)
T d1t2aa_ 1 RNVALITGITGQDGSYLAEFLLEKG----YEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTC-LVKII 75 (347)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT----CEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHH-HHHHH
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCc----CEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchh-hHHHH
Confidence 3556999999999999999999999 99999998543 2222211 11113478999999999888 66654
Q ss_pred HHhhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEe
Q psy11190 74 KDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNV 153 (248)
Q Consensus 74 ~~i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~v 153 (248)
+... +++++|.++.... ..+.+.....+++|+.++.+++..+...-.. +..++|++
T Consensus 76 ~~~~-------~~~v~~~~a~~~~-----~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~------------~~~~~i~~ 131 (347)
T d1t2aa_ 76 NEVK-------PTEIYNLGAQSHV-----KISFDLAEYTADVDGVGTLRLLDAVKTCGLI------------NSVKFYQA 131 (347)
T ss_dssp HHHC-------CSEEEECCSCCCH-----HHHHHSHHHHHHHHTHHHHHHHHHHHHTTCT------------TTCEEEEE
T ss_pred hhcc-------cceeeeeeecccc-----chhhccchhhhhhHHHHHHHHHHHHHHcCCC------------CCcEEEEe
Confidence 4433 8899988876533 1233455566788999999998887655322 34579999
Q ss_pred ecCCCcccc--------cCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC------------
Q psy11190 154 SSIMGSIED--------NTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA------------ 213 (248)
Q Consensus 154 ss~~~~~~~--------~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~------------ 213 (248)
||.+.+... .+..+...|+.+|.+.+.+++.++..+ ++.+..+.|+.+..|......
T Consensus 132 SS~~vyg~~~~~~~~E~~~~~P~~~Yg~sK~~aE~~~~~~~~~~---~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~ 208 (347)
T d1t2aa_ 132 STSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAY---NLFAVNGILFNHESPRRGANFVTRKISRSVAKI 208 (347)
T ss_dssp EEGGGTCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHH
T ss_pred cchheecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEecceeCCCCCCCccccccceeeehh
Confidence 986643211 111235579999999999999887663 678888888777665322111
Q ss_pred ------------------CCchhhHHHHHHHHhhhc
Q psy11190 214 ------------------PLEVGAATAGIIQFIQSL 231 (248)
Q Consensus 214 ------------------~~~~~~~~~~~~~~~~~~ 231 (248)
....++++.+++..+...
T Consensus 209 ~~~~~~~~~~g~g~~~r~~i~v~D~~~a~~~~~~~~ 244 (347)
T d1t2aa_ 209 YLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQND 244 (347)
T ss_dssp HHTSCSCEEESCTTCEECCEEHHHHHHHHHHHHHSS
T ss_pred hcCCcceeecCCCcceeeeeEecHHHHHHHHHhhcC
Confidence 245678888888877653
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.67 E-value=4.4e-17 Score=138.94 Aligned_cols=182 Identities=13% Similarity=0.055 Sum_probs=126.5
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEE-eecCchh--HHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFA-TCRNKDK--AVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDIS 77 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~-~~r~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~ 77 (248)
|| +|||||+|.||++++++|+++| +.|++ +++.... .+.+.. .....++.++++|++|... +..+++..
T Consensus 1 Mk-ILItG~tGfIGs~l~~~L~~~g----~~vv~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~-l~~~~~~~- 72 (361)
T d1kewa_ 1 MK-ILITGGAGFIGSAVVRHIIKNT----QDTVVNIDKLTYAGNLESLSD-ISESNRYNFEHADICDSAE-ITRIFEQY- 72 (361)
T ss_dssp CE-EEEESTTSHHHHHHHHHHHHHC----SCEEEEEECCCTTCCGGGGTT-TTTCTTEEEEECCTTCHHH-HHHHHHHH-
T ss_pred CE-EEEECCCcHHHHHHHHHHHHCC----CCEEEEEeCCCccccHHHHHh-hhhcCCcEEEEccCCCHHH-HHHHHHhC-
Confidence 75 8999999999999999999999 66555 4432211 111111 1234578999999999887 66654433
Q ss_pred hhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCC
Q psy11190 78 DVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIM 157 (248)
Q Consensus 78 ~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~ 157 (248)
++|+|||+|+.... ..+.++....+++|+.++.++.+.+...-....... ....+++++||.+
T Consensus 73 ------~~d~VihlAa~~~~-----~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~------~~~~~~i~~SS~~ 135 (361)
T d1kewa_ 73 ------QPDAVMHLAAESHV-----DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDK------KNNFRFHHISTDE 135 (361)
T ss_dssp ------CCSEEEECCSCCCH-----HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHH------HHHCEEEEEEEGG
T ss_pred ------CCCEEEECccccch-----hhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcc------cCceEEEEeccce
Confidence 29999999987543 113345566789999999999999877643210000 0245899999977
Q ss_pred Ccccc------------------cCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCC
Q psy11190 158 GSIED------------------NTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGG 210 (248)
Q Consensus 158 ~~~~~------------------~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~ 210 (248)
.+-.. .+..+...|+.+|.+.+.+++.++..+ ++++.++.|+.+..|...
T Consensus 136 vyg~~~~~~~~~~~~~~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~---~i~~~~lR~~~vyGp~~~ 203 (361)
T d1kewa_ 136 VYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY---GLPTIVTNCSNNYGPYHF 203 (361)
T ss_dssp GGCCCCCGGGSCTTSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCC
T ss_pred eeCCCccCCccccccCCCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEecCceECcCCC
Confidence 44211 011234559999999999999998664 688999999998887643
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.67 E-value=1.2e-15 Score=128.94 Aligned_cols=194 Identities=14% Similarity=0.071 Sum_probs=132.8
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCch-hHHHHHH-HHhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKD-KAVELLA-LAQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~-~~~~~~~-~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|++|||||+|.||++++++|+++| +.|+++++... ....... ......++.++++|++|.++ ++.+++..
T Consensus 2 K~ILVTGatGfIG~~lv~~Ll~~g----~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~-l~~~~~~~--- 73 (347)
T d1z45a2 2 KIVLVTGGAGYIGSHTVVELIENG----YDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKG-LEKVFKEY--- 73 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT----CEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHH-HHHHHHHS---
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCc----CeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHH-HHHHHhcc---
Confidence 789999999999999999999999 89999876332 2222211 11224578999999999888 66554322
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
++|+|||+|+.... ....+.-...+.+|+.++.++++++... +-.+++++||.+.+
T Consensus 74 ----~~d~VihlAa~~~~-----~~~~~~~~~~~~~N~~~t~~ll~~~~~~---------------~i~~~i~~SS~~vy 129 (347)
T d1z45a2 74 ----KIDSVIHFAGLKAV-----GESTQIPLRYYHNNILGTVVLLELMQQY---------------NVSKFVFSSSATVY 129 (347)
T ss_dssp ----CCCEEEECCSCCCH-----HHHHHSHHHHHHHHHHHHHHHHHHHHHH---------------TCCEEEEEEEGGGG
T ss_pred ----CCCEEEEccccccc-----cccccCcccccccchhhhHHHHHHHHhc---------------ccceEEeecceeee
Confidence 39999999997643 1123344566778999999988887543 34579999997755
Q ss_pred ccc------------cCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCC----CCCCchhhHHHH
Q psy11190 160 IED------------NTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS----NAPLEVGAATAG 223 (248)
Q Consensus 160 ~~~------------~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~----~~~~~~~~~~~~ 223 (248)
... .+..+...|+.+|.+.+.+++.+.... ..++++..+.|+.+..+.... .....+......
T Consensus 130 g~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~ 208 (347)
T d1z45a2 130 GDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSD-KKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPY 208 (347)
T ss_dssp CCGGGSTTCCSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHS-TTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHH
T ss_pred cCcccCCCCCccccccCCCCCChhHhHHHHHHHHHHHHHHhh-ccCCcEEEEeecceEeecCCCccCCCccccHHHHHHH
Confidence 321 111234579999999999999887654 357888888888776554322 222334445555
Q ss_pred HHHHh
Q psy11190 224 IIQFI 228 (248)
Q Consensus 224 ~~~~~ 228 (248)
++...
T Consensus 209 ~~~~~ 213 (347)
T d1z45a2 209 MAQVA 213 (347)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55444
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.66 E-value=1.2e-15 Score=119.75 Aligned_cols=179 Identities=13% Similarity=0.122 Sum_probs=119.3
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
||+++||||||.||++++++|+++| +.|.++.|+.+++... ...++.++.+|++|.++ +.++ +
T Consensus 3 ~kkIlV~GatG~iG~~v~~~Ll~~g----~~V~~~~R~~~~~~~~-----~~~~~~~~~gD~~d~~~-l~~a-------l 65 (205)
T d1hdoa_ 3 VKKIAIFGATGQTGLTTLAQAVQAG----YEVTVLVRDSSRLPSE-----GPRPAHVVVGDVLQAAD-VDKT-------V 65 (205)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTT----CEEEEEESCGGGSCSS-----SCCCSEEEESCTTSHHH-HHHH-------H
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCc----CEEEEEEcChhhcccc-----cccccccccccccchhh-HHHH-------h
Confidence 7899999999999999999999999 9999999998774321 23468999999999877 4443 2
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
. +.|+||+++|...+ . +.. .++..+..+ +++.++++ +-.++|++||.....
T Consensus 66 ~--~~d~vi~~~g~~~~-~-----~~~------~~~~~~~~~----l~~aa~~~-----------~v~r~i~~ss~~~~~ 116 (205)
T d1hdoa_ 66 A--GQDAVIVLLGTRND-L-----SPT------TVMSEGARN----IVAAMKAH-----------GVDKVVACTSAFLLW 116 (205)
T ss_dssp T--TCSEEEECCCCTTC-C-----SCC------CHHHHHHHH----HHHHHHHH-----------TCCEEEEECCGGGTS
T ss_pred c--CCCEEEEEeccCCc-h-----hhh------hhhHHHHHH----HHHHHHhc-----------CCCeEEEEeeeeccC
Confidence 2 38999999986432 1 111 123333333 44455554 457899998866544
Q ss_pred cccCCC-CCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCC-C----------CCCCchhhHHHHHHHHh
Q psy11190 161 EDNTQG-GFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGG-S----------NAPLEVGAATAGIIQFI 228 (248)
Q Consensus 161 ~~~~~~-~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~-~----------~~~~~~~~~~~~~~~~~ 228 (248)
.....+ ....|...|...+.+. +..+++.+.|.||.+...-.. . ....+.+++++.++..+
T Consensus 117 ~~~~~~~~~~~~~~~~~~~e~~l-------~~~~~~~tiirp~~~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~~~~~l 189 (205)
T d1hdoa_ 117 DPTKVPPRLQAVTDDHIRMHKVL-------RESGLKYVAVMPPHIGDQPLTGAYTVTLDGRGPSRVISKHDLGHFMLRCL 189 (205)
T ss_dssp CTTCSCGGGHHHHHHHHHHHHHH-------HHTCSEEEEECCSEEECCCCCSCCEEESSSCSSCSEEEHHHHHHHHHHTT
T ss_pred CCccccccccccchHHHHHHHHH-------HhcCCceEEEecceecCCCCcccEEEeeCCCCCCCcCCHHHHHHHHHHHh
Confidence 331111 1123455555544332 245899999999988543211 1 11357899999999988
Q ss_pred hhcc
Q psy11190 229 QSLG 232 (248)
Q Consensus 229 ~~~~ 232 (248)
.++.
T Consensus 190 ~~~~ 193 (205)
T d1hdoa_ 190 TTDE 193 (205)
T ss_dssp SCST
T ss_pred CCCC
Confidence 7643
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=99.65 E-value=3.1e-15 Score=126.29 Aligned_cols=170 Identities=16% Similarity=0.140 Sum_probs=121.1
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhh---cCCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQ---HSNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
|++|||||+|.||.+++++|+++| +.|+.+.|+.++...+...... ......+..|+++.++ +..+
T Consensus 12 k~VlVTG~sGfIGs~l~~~Ll~~G----~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-~~~~------ 80 (342)
T d1y1pa1 12 SLVLVTGANGFVASHVVEQLLEHG----YKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGA-YDEV------ 80 (342)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT----CEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTT-TTTT------
T ss_pred CEEEEECCCCHHHHHHHHHHHHCc----CEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhh-hhhh------
Confidence 799999999999999999999999 9999999998776666443322 2234457789998877 4433
Q ss_pred hhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 79 VVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
+. ++|+++|+++.... ..+. ...+..|+.++.++++.+...- .-.++|++||..+
T Consensus 81 -~~--~~~~v~~~a~~~~~-----~~~~---~~~~~~nv~gt~~ll~~~~~~~--------------~v~~~i~~SS~~~ 135 (342)
T d1y1pa1 81 -IK--GAAGVAHIASVVSF-----SNKY---DEVVTPAIGGTLNALRAAAATP--------------SVKRFVLTSSTVS 135 (342)
T ss_dssp -TT--TCSEEEECCCCCSC-----CSCH---HHHHHHHHHHHHHHHHHHHTCT--------------TCCEEEEECCGGG
T ss_pred -cc--cchhhhhhcccccc-----cccc---cccccchhhhHHHHHHhhhccc--------------cccccccccccee
Confidence 22 48999999986532 1222 3445568888888777755531 3467999998764
Q ss_pred cccccCC----------------------------CCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCC
Q psy11190 159 SIEDNTQ----------------------------GGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208 (248)
Q Consensus 159 ~~~~~~~----------------------------~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~ 208 (248)
.....+. .+...|+.+|.+.+.+++.++.... .++++.++.|+.+-.|.
T Consensus 136 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~-~~~~~~~i~p~~v~Gp~ 212 (342)
T d1y1pa1 136 ALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENK-PHFTLNAVLPNYTIGTI 212 (342)
T ss_dssp TCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHC-CSSEEEEEEESEEECCC
T ss_pred eccCCCCCCCccccccccccccccccccccccCCCCCcCcccchhHhHHHHHHHhhhhcc-cccccceecccceeCCC
Confidence 4322110 1123599999999999998887764 46888899998887664
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.64 E-value=1.5e-15 Score=127.58 Aligned_cols=179 Identities=17% Similarity=0.030 Sum_probs=124.0
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCch-----hHHHHHH-H-HhhcCCceeEEeeccCCchhhhhHH
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKD-----KAVELLA-L-AQQHSNLHVIELDVTDFSKQQDVLF 73 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~-----~~~~~~~-~-~~~~~~~~~~~~D~~~~~~~v~~~~ 73 (248)
+|++|||||||.||++++++|+++| +.|+.++|... +...+.. . ......+.++.+|+++.++ +...+
T Consensus 1 ~k~~LVTGatGfiG~~lv~~Ll~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~-~~~~~ 75 (339)
T d1n7ha_ 1 RKIALITGITGQDGSYLTEFLLGKG----YEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASS-LRRWI 75 (339)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT----CEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHH-HHHHH
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCc----CEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHH-HHHHH
Confidence 5899999999999999999999999 99999998532 2222211 1 1123467888999998777 55554
Q ss_pred HHhhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEe
Q psy11190 74 KDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNV 153 (248)
Q Consensus 74 ~~i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~v 153 (248)
+.. ++|+|||+|+.... ..+.+.-...+..|..+..++...+........ ...++++.
T Consensus 76 ~~~-------~~D~Vih~Aa~~~~-----~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~----------~~~~~~~~ 133 (339)
T d1n7ha_ 76 DVI-------KPDEVYNLAAQSHV-----AVSFEIPDYTADVVATGALRLLEAVRSHTIDSG----------RTVKYYQA 133 (339)
T ss_dssp HHH-------CCSEEEECCSCCCH-----HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHC----------CCCEEEEE
T ss_pred hhh-------ccchhhhccccccc-----cccccCccccccccccccchhhhhhhhcccccc----------cceeeeec
Confidence 432 39999999987543 112344556777899999999888776654431 23445555
Q ss_pred ecCCCcccc-------cCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCC
Q psy11190 154 SSIMGSIED-------NTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMG 209 (248)
Q Consensus 154 ss~~~~~~~-------~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~ 209 (248)
||....... .+..+...|+.+|.+.+.+++..++.. ++++..+.|+.+..|..
T Consensus 134 ss~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~vyGp~~ 193 (339)
T d1n7ha_ 134 GSSEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAY---GLFACNGILFNHESPRR 193 (339)
T ss_dssp EEGGGGTTSCSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTS
T ss_pred ccceecccCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHh---CCCEEEEEEccccCCCC
Confidence 554432211 111245679999999999999888663 68999999988877653
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.64 E-value=8.2e-16 Score=128.32 Aligned_cols=171 Identities=13% Similarity=0.005 Sum_probs=119.8
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchh--HHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDK--AVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|+||||||+|.||++++++|+++| +.|+.++|.... ...+. .....+++.++++|++|.+. +...+....
T Consensus 1 k~vLItG~tGfiG~~l~~~Ll~~g----~~V~~~~r~~~~~~~~~l~-~~~~~~~~~~~~~Dl~d~~~-~~~~~~~~~-- 72 (321)
T d1rpna_ 1 RSALVTGITGQDGAYLAKLLLEKG----YRVHGLVARRSSDTRWRLR-ELGIEGDIQYEDGDMADACS-VQRAVIKAQ-- 72 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT----CEEEEEECCCSSCCCHHHH-HTTCGGGEEEEECCTTCHHH-HHHHHHHHC--
T ss_pred CEEEEECCCCHHHHHHHHHHHHCc----CEEEEEECCCCcccHHHHH-HhcccCCcEEEEccccChHH-hhhhhcccc--
Confidence 789999999999999999999999 999999987543 22222 22334578999999999877 555544333
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
.++++|+|+.... . ...+.....+..|+.++.+++..+...- ...++++.||.. .
T Consensus 73 -----~~~~~~~a~~~~~-~----~~~~~~~~~~~~n~~g~~~~l~~~~~~~--------------~~~~~i~~Ss~~-~ 127 (321)
T d1rpna_ 73 -----PQEVYNLAAQSFV-G----ASWNQPVTTGVVDGLGVTHLLEAIRQFS--------------PETRFYQASTSE-M 127 (321)
T ss_dssp -----CSEEEECCSCCCH-H----HHTTSHHHHHHHHTHHHHHHHHHHHHHC--------------TTSEEEEEEEGG-G
T ss_pred -----ccccccccccccc-c----ccccchHHHHhhhhhchHHHHHHHHHhC--------------CCcccccccchh-h
Confidence 7788888876543 1 1223446677789999999888765541 234566666544 3
Q ss_pred cccc---------CCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCC
Q psy11190 160 IEDN---------TQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208 (248)
Q Consensus 160 ~~~~---------~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~ 208 (248)
.+.. +..+...|+.+|.+.+.+++.++... ++++..+.|+.+..|.
T Consensus 128 ~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lr~~~vyGp~ 182 (321)
T d1rpna_ 128 FGLIQAERQDENTPFYPRSPYGVAKLYGHWITVNYRESF---GLHASSGILFNHESPL 182 (321)
T ss_dssp GCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTT
T ss_pred cCcccCCCCCCCCCccccChhHHHHHHHHHHHHHHHhhc---CCcEEEEEEecccCCC
Confidence 3321 11245679999999999999888764 5777777777666654
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=99.63 E-value=2.3e-15 Score=126.78 Aligned_cols=201 Identities=15% Similarity=0.117 Sum_probs=140.9
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|| +|||||+|.||++++++|+++|. ..|+.+++.......+ ....++.++++|+++.++ +... +.+
T Consensus 1 MK-ILITG~tGfiG~~l~~~Ll~~g~---~~V~~ld~~~~~~~~~----~~~~~~~~i~~Di~~~~~-~~~~---~~~-- 66 (342)
T d2blla1 1 MR-VLILGVNGFIGNHLTERLLREDH---YEVYGLDIGSDAISRF----LNHPHFHFVEGDISIHSE-WIEY---HVK-- 66 (342)
T ss_dssp CE-EEEETCSSHHHHHHHHHHHHSTT---CEEEEEESCCGGGGGG----TTCTTEEEEECCTTTCSH-HHHH---HHH--
T ss_pred CE-EEEECCCcHHHHHHHHHHHHCCC---CEEEEEeCCCcchhhh----ccCCCeEEEECccCChHH-HHHH---HHh--
Confidence 75 89999999999999999999984 5799888765543322 124689999999998776 3332 221
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
++|+|||+|+.... . ...+.....+.+|+.++.++++.+... +.+.+++||.....
T Consensus 67 ---~~d~Vih~a~~~~~-~----~~~~~~~~~~~~nv~gt~~ll~~~~~~----------------~~~~~~~ss~~~~~ 122 (342)
T d2blla1 67 ---KCDVVLPLVAIATP-I----EYTRNPLRVFELDFEENLRIIRYCVKY----------------RKRIIFPSTSEVYG 122 (342)
T ss_dssp ---HCSEEEECBCCCCH-H----HHHHSHHHHHHHHTHHHHHHHHHHHHT----------------TCEEEEECCGGGGB
T ss_pred ---CCCccccccccccc-c----ccccCCccccccccccccccccccccc----------------cccccccccccccc
Confidence 29999999997654 1 123344567888999999998886553 44566666655433
Q ss_pred cccC---------------CCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC------------
Q psy11190 161 EDNT---------------QGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA------------ 213 (248)
Q Consensus 161 ~~~~---------------~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~------------ 213 (248)
.... ..+...|+.+|.+.+.+++.++... |+++..+.|..+..+......
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~ 199 (342)
T d2blla1 123 MCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQ 199 (342)
T ss_dssp TCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEECSSCCCTTCSBSCBCHHHHH
T ss_pred cccccccccccccccccccCCCcchhhhcccchhhhhhhhhccc---CceeEEeeccccccccccccccccccccccchH
Confidence 2211 1123569999999999999888774 688888888877766322210
Q ss_pred ----------------------CCchhhHHHHHHHHhhhcccccccceeee
Q psy11190 214 ----------------------PLEVGAATAGIIQFIQSLGEAHNGGFFEY 242 (248)
Q Consensus 214 ----------------------~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 242 (248)
....+++++.++..+........|..|..
T Consensus 200 ~~~~~~~g~~~~~~~~g~~~r~~i~v~D~~~a~~~~~~~~~~~~~g~~~Ni 250 (342)
T d2blla1 200 LILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINI 250 (342)
T ss_dssp HHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEE
T ss_pred HHHHHHhCCCccccCCCCeeeeecccccccceeeeehhhccccCCCeEEEE
Confidence 24588899999998887655555666654
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.63 E-value=2.1e-15 Score=129.52 Aligned_cols=176 Identities=12% Similarity=0.034 Sum_probs=123.8
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCc-----------------hhHHHHHHHH-hhcCCceeEEeecc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNK-----------------DKAVELLALA-QQHSNLHVIELDVT 63 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~-----------------~~~~~~~~~~-~~~~~~~~~~~D~~ 63 (248)
|++|||||+|.||.+++++|+++| +.|++++.-. ...+.+.... ....++.++++|++
T Consensus 2 ~kILVTGatGfiG~~lv~~Ll~~g----~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~ 77 (393)
T d1i24a_ 2 SRVMVIGGDGYCGWATALHLSKKN----YEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDIC 77 (393)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT----CEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTT
T ss_pred CEEEEECCCcHHHHHHHHHHHHCc----CEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCC
Confidence 469999999999999999999999 9999986210 0111111111 12457899999999
Q ss_pred CCchhhhhHHHHhhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCC
Q psy11190 64 DFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPL 143 (248)
Q Consensus 64 ~~~~~v~~~~~~i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~ 143 (248)
|.+. ++.+++..+ +|+|+|.|+.... .....+.+.....+.+|+.++.++++.+...=
T Consensus 78 d~~~-l~~~~~~~~-------~d~ViHlAa~~~~--~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~------------ 135 (393)
T d1i24a_ 78 DFEF-LAESFKSFE-------PDSVVHFGEQRSA--PYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFG------------ 135 (393)
T ss_dssp SHHH-HHHHHHHHC-------CSEEEECCSCCCH--HHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHC------------
T ss_pred CHHH-HHHHHHhhc-------chheecccccccc--ccccccccccccccccccccccHHHHHHHHhc------------
Confidence 9888 777766542 9999999987543 22223556677788899999999988876541
Q ss_pred CCCCceEEEeecCCCcccc---------------------cCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCc
Q psy11190 144 GSSRAAIVNVSSIMGSIED---------------------NTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPG 202 (248)
Q Consensus 144 ~~~~~~iv~vss~~~~~~~---------------------~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG 202 (248)
...++++.||....... .+..+...|+.+|.+.+.+++.++.+. ++++..+.|+
T Consensus 136 --~~~~~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~---~l~~~~lR~~ 210 (393)
T d1i24a_ 136 --EECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQG 210 (393)
T ss_dssp --TTCEEEEECCGGGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEEC
T ss_pred --cccceeeccccccccccccccccccccccccccccccccccccccHHHHHhhhhccccccccccc---ceeeeecccc
Confidence 23456666665433211 012334569999999999999887664 6888888888
Q ss_pred ceecCC
Q psy11190 203 WVKTDM 208 (248)
Q Consensus 203 ~v~t~~ 208 (248)
.+..+-
T Consensus 211 ~v~G~~ 216 (393)
T d1i24a_ 211 VVYGVK 216 (393)
T ss_dssp EEECSC
T ss_pred cccCCC
Confidence 777654
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.61 E-value=4.6e-15 Score=124.97 Aligned_cols=171 Identities=15% Similarity=0.117 Sum_probs=122.5
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCch----hHHHHHHHH--hhcCCceeEEeeccCCchhhhhHHH
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKD----KAVELLALA--QQHSNLHVIELDVTDFSKQQDVLFK 74 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~----~~~~~~~~~--~~~~~~~~~~~D~~~~~~~v~~~~~ 74 (248)
+|++|||||||.||++++++|.++| +.|+.++|... .......+. ....++.++.+|..|... ..
T Consensus 16 ~k~iLVTG~tGfIGs~lv~~L~~~g----~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~-~~---- 86 (341)
T d1sb8a_ 16 PKVWLITGVAGFIGSNLLETLLKLD----QKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDD-CN---- 86 (341)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT----CEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHH-HH----
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCc----CEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccccc-cc----
Confidence 4799999999999999999999999 99999986322 222222211 123478889999988655 22
Q ss_pred HhhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEee
Q psy11190 75 DISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVS 154 (248)
Q Consensus 75 ~i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vs 154 (248)
.... ..+.++|.+..... ..+.++....+.+|+.++.++++.+... +..++|++|
T Consensus 87 ---~~~~--~~~~v~~~~a~~~~-----~~~~~~~~~~~~~Nv~gt~~ll~~~~~~---------------~~~~~i~~S 141 (341)
T d1sb8a_ 87 ---NACA--GVDYVLHQAALGSV-----PRSINDPITSNATNIDGFLNMLIAARDA---------------KVQSFTYAA 141 (341)
T ss_dssp ---HHHT--TCSEEEECCSCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHHT---------------TCSEEEEEE
T ss_pred ---cccc--cccccccccccccc-----cccccCccchhheeehhHHHHHHHHHhc---------------CCceEEEcc
Confidence 1111 37888888876533 1145667778889999999998877653 345899999
Q ss_pred cCCCcccc--------cCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCC
Q psy11190 155 SIMGSIED--------NTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208 (248)
Q Consensus 155 s~~~~~~~--------~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~ 208 (248)
|....... .+..+...|+.+|.+.+.+++.+++.. ++++..+.|+.+..+.
T Consensus 142 S~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~i~~~ilR~~~v~G~~ 200 (341)
T d1sb8a_ 142 SSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCY---GFSTIGLRYFNVFGRR 200 (341)
T ss_dssp EGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECCEECTT
T ss_pred cceeeCCCCCCCccCCCCCCCCCcchHHHHHHHHHHHHHHHHh---CCCeEEEEeceeeccC
Confidence 97754322 111245689999999999999988764 5788888888777664
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.60 E-value=1.2e-14 Score=115.35 Aligned_cols=200 Identities=15% Similarity=0.062 Sum_probs=125.0
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|+|+|||||+|.||++++++|+++|.. ..|+...|++++... ...++.++.+|+++.+. ..++ +
T Consensus 3 ~~tVlVtGatG~iG~~l~~~Ll~~g~~--v~v~~~~R~~~~~~~------~~~~~~~~~~d~~~~~~-~~~~-------~ 66 (252)
T d2q46a1 3 LPTVLVTGASGRTGQIVYKKLKEGSDK--FVAKGLVRSAQGKEK------IGGEADVFIGDITDADS-INPA-------F 66 (252)
T ss_dssp CCEEEEESTTSTTHHHHHHHHHHTTTT--CEEEEEESCHHHHHH------TTCCTTEEECCTTSHHH-HHHH-------H
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCc--EEEEEEcCCHHHHHh------ccCCcEEEEeeeccccc-cccc-------c
Confidence 899999999999999999999999932 356667787765433 24578899999999877 4433 2
Q ss_pred cCCCccEEEeccccCCccccCC--------CCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEE
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLG--------LLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVN 152 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~ 152 (248)
. ++|.+||+++......... ............+|+.+...+....... ..+...+
T Consensus 67 ~--~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~ 129 (252)
T d2q46a1 67 Q--GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA---------------GVKHIVV 129 (252)
T ss_dssp T--TCSEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH---------------TCSEEEE
T ss_pred c--cceeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeeccccccc---------------ccccccc
Confidence 2 3899999998764311111 1111233444556666766665544333 4567777
Q ss_pred eecCCCcccccCCCCCccchhhH-HHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC---------------CCCc
Q psy11190 153 VSSIMGSIEDNTQGGFHPYRCSK-AALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN---------------APLE 216 (248)
Q Consensus 153 vss~~~~~~~~~~~~~~~y~~sK-~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~---------------~~~~ 216 (248)
.++.....+. .+...+...+ .........+.. ..|+++..+.||++..+..... ....
T Consensus 130 ~s~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~ 203 (252)
T d2q46a1 130 VGSMGGTNPD---HPLNKLGNGNILVWKRKAEQYLA---DSGTPYTIIRAGGLLDKEGGVRELLVGKDDELLQTDTKTVP 203 (252)
T ss_dssp EEETTTTCTT---CGGGGGGGCCHHHHHHHHHHHHH---HSSSCEEEEEECEEECSCTTSSCEEEESTTGGGGSSCCEEE
T ss_pred ccccccCCCC---cccccccccchhhhhhhhhhhhh---cccccceeecceEEECCCcchhhhhhccCcccccCCCCeEE
Confidence 7776655443 2222222222 222222222222 3578999999999977753321 1346
Q ss_pred hhhHHHHHHHHhhhcccccccceee
Q psy11190 217 VGAATAGIIQFIQSLGEAHNGGFFE 241 (248)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~g~~~~ 241 (248)
.+++++.++..+..+. ..|+.|.
T Consensus 204 ~~Dva~a~~~~l~~~~--~~g~~~~ 226 (252)
T d2q46a1 204 RADVAEVCIQALLFEE--AKNKAFD 226 (252)
T ss_dssp HHHHHHHHHHHTTCGG--GTTEEEE
T ss_pred HHHHHHHHHHHhCCcc--ccCcEEE
Confidence 8899999999887643 3444444
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.60 E-value=5.6e-15 Score=124.77 Aligned_cols=190 Identities=14% Similarity=0.099 Sum_probs=128.8
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecC--chh--HHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRN--KDK--AVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDI 76 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~--~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i 76 (248)
||.+|||||||.||.+++++|+++| +.|.+++++ ... ...+.. ....++.++.+|++|.+. +..+
T Consensus 2 ~mkILVTGgtGfIGs~lv~~L~~~g----~~v~v~~~d~~~~~~~~~~~~~--~~~~~i~~~~~Di~d~~~-~~~~---- 70 (346)
T d1oc2a_ 2 FKNIIVTGGAGFIGSNFVHYVYNNH----PDVHVTVLDKLTYAGNKANLEA--ILGDRVELVVGDIADAEL-VDKL---- 70 (346)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHC----TTCEEEEEECCCTTCCGGGTGG--GCSSSEEEEECCTTCHHH-HHHH----
T ss_pred cCEEEEeCCCcHHHHHHHHHHHHCC----CCeEEEEEeCCCccccHHHHHH--hhcCCeEEEEccCCCHHH-HHHH----
Confidence 8899999999999999999999999 554444332 111 110111 124578999999998776 4443
Q ss_pred hhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecC
Q psy11190 77 SDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSI 156 (248)
Q Consensus 77 ~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~ 156 (248)
+. ..|.++|.|+...... ..++....+++|+.++.+++..+... +.+++++||.
T Consensus 71 ---~~--~~~~v~~~a~~~~~~~-----~~~~~~~~~~~N~~g~~nll~~~~~~----------------~~k~i~~ss~ 124 (346)
T d1oc2a_ 71 ---AA--KADAIVHYAAESHNDN-----SLNDPSPFIHTNFIGTYTLLEAARKY----------------DIRFHHVSTD 124 (346)
T ss_dssp ---HT--TCSEEEECCSCCCHHH-----HHHCCHHHHHHHTHHHHHHHHHHHHH----------------TCEEEEEEEG
T ss_pred ---Hh--hhhhhhhhhhcccccc-----hhhCcccceeeehHhHHhhhhhhccc----------------cccccccccc
Confidence 22 3788999998765411 22344566788999999998766443 3467777766
Q ss_pred CCcccc--------------------cCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC---
Q psy11190 157 MGSIED--------------------NTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA--- 213 (248)
Q Consensus 157 ~~~~~~--------------------~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~--- 213 (248)
..+... .+..+...|+.+|.+.+.+++.+.+++ ++++.++.|+.+..|......
T Consensus 125 ~vyg~~~~~~~~~~~~~~~~~~~~e~~~~~p~s~Y~~sK~~~E~~~~~~~~~~---~i~~~ilR~~~vyGp~~~~~~~~~ 201 (346)
T d1oc2a_ 125 EVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF---GVKATISNCSNNYGPYQHIEKFIP 201 (346)
T ss_dssp GGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEESTTCCTTSHHH
T ss_pred eEecccCccccccccccCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHc---CCCEEEEeecceeCCCCCccchhH
Confidence 533210 011234569999999999999888764 799999999999887532211
Q ss_pred -----------------------CCchhhHHHHHHHHhhh
Q psy11190 214 -----------------------PLEVGAATAGIIQFIQS 230 (248)
Q Consensus 214 -----------------------~~~~~~~~~~~~~~~~~ 230 (248)
....++++++++.++..
T Consensus 202 ~~i~~~~~~~~~~i~~~g~~~r~~i~v~D~a~a~~~~~~~ 241 (346)
T d1oc2a_ 202 RQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILTK 241 (346)
T ss_dssp HHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCceeEeCCCCccccccchhhHHHHHHHHHhh
Confidence 24577888888776655
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=99.59 E-value=1.6e-14 Score=120.77 Aligned_cols=155 Identities=18% Similarity=0.141 Sum_probs=110.2
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCch--hHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKD--KAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
.+|||||+|.||++++++|+++| +.|+.+++-.. ..+. .......+++.++.+|++|.++ +..+++..
T Consensus 2 KILVTGatGfIGs~lv~~Ll~~g----~~V~~id~~~~~~~~~~-~~~~~~~~~~~~i~~Di~~~~~-l~~~~~~~---- 71 (338)
T d1orra_ 2 KLLITGGCGFLGSNLASFALSQG----IDLIVFDNLSRKGATDN-LHWLSSLGNFEFVHGDIRNKND-VTRLITKY---- 71 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT----CEEEEEECCCSTTHHHH-HHHHHTTCCCEEEECCTTCHHH-HHHHHHHH----
T ss_pred EEEEECCCcHHHHHHHHHHHHCc----CEEEEEECCCcccchhH-HHHhhccCCcEEEEcccCCHHH-HHHHHHhc----
Confidence 48999999999999999999999 89999875322 2222 2333446789999999999888 66655443
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
++|+|||+|+.... ....++....+++|+.|+.++++++... +..+.+++||.....
T Consensus 72 ---~~d~Vih~aa~~~~-----~~~~~~~~~~~~~Nv~gt~nll~~~~~~---------------~~~~~i~~sS~~~~~ 128 (338)
T d1orra_ 72 ---MPDSCFHLAGQVAM-----TTSIDNPCMDFEINVGGTLNLLEAVRQY---------------NSNCNIIYSSTNKVY 128 (338)
T ss_dssp ---CCSEEEECCCCCCH-----HHHHHCHHHHHHHHHHHHHHHHHHHHHH---------------CTTCEEEEEEEGGGG
T ss_pred ---CCceEEeecccccc-----cccccChHHHHHHHHHHHHHHHHhhhcc---------------ccccccccccccccc
Confidence 28999999987643 1123445677888999999998876554 344556666555433
Q ss_pred ccc-------------------------CCCCCccchhhHHHHHHHHHHHHhhcc
Q psy11190 161 EDN-------------------------TQGGFHPYRCSKAALNAATRSLSIDLK 190 (248)
Q Consensus 161 ~~~-------------------------~~~~~~~y~~sK~a~~~~~~~la~e~~ 190 (248)
+.. ...+...|+.+|...+.+.......+.
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~~ 183 (338)
T d1orra_ 129 GDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIFG 183 (338)
T ss_dssp TTCTTSCEEECSSCEEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred ccccccccccccccccccccccCcccCCccccccccccccchhhhhhhhhhhccC
Confidence 321 011345689999999999988887764
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.58 E-value=5.8e-15 Score=123.09 Aligned_cols=165 Identities=12% Similarity=-0.027 Sum_probs=113.7
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCch-hHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKD-KAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
+|++|||||+|.||++++++|+++| +.|+.+++... ..+.+. .......+|+.+.+. ++.+
T Consensus 1 kKKIlVtG~sGfiG~~lv~~L~~~g----~~V~~~d~~~~~~~~~~~------~~~~~~~~d~~~~~~-~~~~------- 62 (312)
T d2b69a1 1 RKRILITGGAGFVGSHLTDKLMMDG----HEVTVVDNFFTGRKRNVE------HWIGHENFELINHDV-VEPL------- 62 (312)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT----CEEEEEECCSSCCGGGTG------GGTTCTTEEEEECCT-TSCC-------
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCc----CEEEEEeCCCcCCHHHHH------HhcCCCceEEEehHH-HHHH-------
Confidence 5889999999999999999999999 89999986322 222111 112223445555444 2221
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
+. ++|+|||+|+.... .. ..++..+.+++|+.++.++++++... ..++|++||.+.+
T Consensus 63 ~~--~~d~VihlAa~~~~-~~----~~~~~~~~~~~Nv~g~~~ll~~~~~~----------------~~k~I~~SS~~vy 119 (312)
T d2b69a1 63 YI--EVDQIYHLASPASP-PN----YMYNPIKTLKTNTIGTLNMLGLAKRV----------------GARLLLASTSEVY 119 (312)
T ss_dssp CC--CCSEEEECCSCCSH-HH----HTTCHHHHHHHHHHHHHHHHHHHHHH----------------TCEEEEEEEGGGG
T ss_pred Hc--CCCEEEECcccCCc-hh----HHhCHHHHHHHHHHHHHHHHHHHHHc----------------CCcEEEEEChhee
Confidence 12 49999999987543 11 12344566788999999988775432 2479999986654
Q ss_pred cccc-------------CCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCC
Q psy11190 160 IEDN-------------TQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMG 209 (248)
Q Consensus 160 ~~~~-------------~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~ 209 (248)
.... +..+...|+.+|.+.+.+++..++.+ |+++..+.|+.+..|..
T Consensus 120 ~~~~~~~~~e~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~~ 179 (312)
T d2b69a1 120 GDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQE---GVEVRVARIFNTFGPRM 179 (312)
T ss_dssp BSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTC
T ss_pred cCCCCCCCCccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHh---CCcEEEEEeeeEECCCC
Confidence 3211 11244579999999999999988774 68999999999987653
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=99.57 E-value=5.5e-15 Score=124.83 Aligned_cols=176 Identities=18% Similarity=0.160 Sum_probs=126.2
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||+|.||.+++++|+++| +.|+.++|+..+...+.+......++.++.+|++|.+. +..+++..
T Consensus 9 KkILVTG~tGfIGs~lv~~Ll~~g----~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~-l~~~~~~~----- 78 (356)
T d1rkxa_ 9 KRVFVTGHTGFKGGWLSLWLQTMG----ATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNK-LLESIREF----- 78 (356)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT----CEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHH-HHHHHHHH-----
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC----CEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHh-hhhhhhhc-----
Confidence 789999999999999999999999 99999999877655554444445579999999999877 55543332
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
.+|+++|.|+.... ..+.+..+..+.+|+.++.+++.++...- ....+++.|+......
T Consensus 79 --~~~~v~~~aa~~~~-----~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~--------------~~~~~~~~s~~~~~~~ 137 (356)
T d1rkxa_ 79 --QPEIVFHMAAQPLV-----RLSYSEPVETYSTNVMGTVYLLEAIRHVG--------------GVKAVVNITSDKCYDN 137 (356)
T ss_dssp --CCSEEEECCSCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHHHC--------------CCCEEEEECCGGGBCC
T ss_pred --hhhhhhhhhccccc-----cccccCCccccccccccchhhhhhhhccc--------------cccccccccccccccc
Confidence 38999999986543 22344566677889999998888876541 2344555554443322
Q ss_pred c---------cCCCCCccchhhHHHHHHHHHHHHhhcc------CCCeEEEEecCcceecCC
Q psy11190 162 D---------NTQGGFHPYRCSKAALNAATRSLSIDLK------GDKIIATAMHPGWVKTDM 208 (248)
Q Consensus 162 ~---------~~~~~~~~y~~sK~a~~~~~~~la~e~~------~~~i~v~~v~PG~v~t~~ 208 (248)
. .+..+...|+.+|...+.+++..+.++. .+++.+..+.|+.+..|-
T Consensus 138 ~~~~~~~~~~~~~~p~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~ 199 (356)
T d1rkxa_ 138 KEWIWGYRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGG 199 (356)
T ss_dssp CCSSSCBCTTSCBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTT
T ss_pred cccccccccccccCCCCccccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCC
Confidence 1 1112345699999999999988887653 346888888888776654
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.57 E-value=7.5e-15 Score=122.75 Aligned_cols=196 Identities=14% Similarity=0.080 Sum_probs=133.9
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCC--ceEEEeecCch--hHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQP--AHIFATCRNKD--KAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDI 76 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~--~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i 76 (248)
|| +|||||+|.||++++++|+++|..+. .+|+..+.... ....+ .......++.++..|.++... ...
T Consensus 1 Mk-IlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~-~~~~~~~~~~~~~~d~~~~~~-~~~----- 72 (322)
T d1r6da_ 1 MR-LLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANL-APVDADPRLRFVHGDIRDAGL-LAR----- 72 (322)
T ss_dssp CE-EEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGG-GGGTTCTTEEEEECCTTCHHH-HHH-----
T ss_pred CE-EEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHh-hhhhcCCCeEEEEeccccchh-hhc-----
Confidence 75 89999999999999999999993211 13344433211 11111 112234578899999988765 221
Q ss_pred hhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecC
Q psy11190 77 SDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSI 156 (248)
Q Consensus 77 ~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~ 156 (248)
... .+|.++|.|+.... ....+.....+++|+.++.++++.+... +..++|++||.
T Consensus 73 --~~~--~~d~vi~~a~~~~~-----~~~~~~~~~~~~~N~~gt~~ll~~~~~~---------------~~~~~I~~Ss~ 128 (322)
T d1r6da_ 73 --ELR--GVDAIVHFAAESHV-----DRSIAGASVFTETNVQGTQTLLQCAVDA---------------GVGRVVHVSTN 128 (322)
T ss_dssp --HTT--TCCEEEECCSCCCH-----HHHHHCCHHHHHHHTHHHHHHHHHHHHT---------------TCCEEEEEEEG
T ss_pred --ccc--ccceEEeecccccc-----cccccchHHHhhhhHHHHHHHHHHHHHc---------------CCceEEEeecc
Confidence 222 48999999987643 1234455666788999999998887643 45679999987
Q ss_pred CCccccc--------CCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC---------------
Q psy11190 157 MGSIEDN--------TQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA--------------- 213 (248)
Q Consensus 157 ~~~~~~~--------~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~--------------- 213 (248)
+...... +..+...|+.+|.+.+.+++.++++. |+++..+.|+.+..|......
T Consensus 129 ~~yg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~~~~i 205 (322)
T d1r6da_ 129 QVYGSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTY---GLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTL 205 (322)
T ss_dssp GGGCCCSSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCE
T ss_pred eeecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEeeeEECcCCCcCcHHHHHHHHHHcCCCc
Confidence 7554321 11245679999999999999998764 689999999999877543311
Q ss_pred -----------CCchhhHHHHHHHHhhhc
Q psy11190 214 -----------PLEVGAATAGIIQFIQSL 231 (248)
Q Consensus 214 -----------~~~~~~~~~~~~~~~~~~ 231 (248)
....+++++.++..+...
T Consensus 206 ~v~~~g~~~r~~i~v~D~a~ai~~~~~~~ 234 (322)
T d1r6da_ 206 PLYGDGANVREWVHTDDHCRGIALVLAGG 234 (322)
T ss_dssp EEETTSCCEEEEEEHHHHHHHHHHHHHHC
T ss_pred EEecCCCeEEccEEHHHHHHHHHHHHhCC
Confidence 135778888888888663
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.53 E-value=5.7e-14 Score=118.33 Aligned_cols=170 Identities=20% Similarity=0.152 Sum_probs=118.8
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecC------ch----hHHHHHHHHhhcCCceeEEeeccCCchhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRN------KD----KAVELLALAQQHSNLHVIELDVTDFSKQQDV 71 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~------~~----~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~ 71 (248)
|++|||||+|.||.+++++|+++| +.|+.+++. .. ..+..... ...++.++++|++|.+. +..
T Consensus 3 kKILITG~tGfIGs~lv~~Ll~~g----~~V~~ld~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~-l~~ 75 (346)
T d1ek6a_ 3 EKVLVTGGAGYIGSHTVLELLEAG----YLPVVIDNFHNAFRGGGSLPESLRRVQEL--TGRSVEFEEMDILDQGA-LQR 75 (346)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTT----CCEEEEECSSSSCBCSSSSBHHHHHHHHH--HTCCCEEEECCTTCHHH-HHH
T ss_pred CeEEEECCCcHHHHHHHHHHHHCc----CEEEEEECCCccccccccchHHHHHHHHh--cCCCcEEEEeecccccc-ccc
Confidence 579999999999999999999999 899998642 11 12221222 35689999999999877 555
Q ss_pred HHHHhhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEE
Q psy11190 72 LFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIV 151 (248)
Q Consensus 72 ~~~~i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv 151 (248)
++... .+|+++|.|+.... ..+.++....+++|+.++.+++.++... +-.+++
T Consensus 76 ~~~~~-------~~~~i~h~Aa~~~~-----~~~~~~p~~~~~~Nv~gt~~l~~~~~~~---------------~v~~~i 128 (346)
T d1ek6a_ 76 LFKKY-------SFMAVIHFAGLKAV-----GESVQKPLDYYRVNLTGTIQLLEIMKAH---------------GVKNLV 128 (346)
T ss_dssp HHHHC-------CEEEEEECCSCCCH-----HHHHHCHHHHHHHHHHHHHHHHHHHHHT---------------TCCEEE
T ss_pred ccccc-------ccccccccccccCc-----HhhHhCHHHHHHhhhcccccccchhhhc---------------Cccccc
Confidence 43321 38999999987543 1123344566788999988888775442 334688
Q ss_pred EeecCCCccccc---------CCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecC
Q psy11190 152 NVSSIMGSIEDN---------TQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTD 207 (248)
Q Consensus 152 ~vss~~~~~~~~---------~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~ 207 (248)
++||........ .......|+.+|...+...+.++.. ..+.....+.|+.+..+
T Consensus 129 ~~ss~~~~~~~~~~~~~~~~~~~~~~~~Y~~~k~~~e~~~~~~~~~--~~~~~~~~lR~~~v~G~ 191 (346)
T d1ek6a_ 129 FSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQA--DKTWNAVLLRYFNPTGA 191 (346)
T ss_dssp EEEEGGGGCSCSSSSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHH--CTTCEEEEEEECEEECC
T ss_pred ccccceeeeccccccccccccccccCChHHHHHHHHHHHHHHHHHh--ccCCceEEEeecceecc
Confidence 888776443321 1123446999999999998887754 45678888888777665
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=99.52 E-value=1.9e-14 Score=119.67 Aligned_cols=156 Identities=13% Similarity=0.037 Sum_probs=113.5
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
+|.+|||||+|.||++++++|+++| +.|+++++.. .+|+.+.+. +..+++.-
T Consensus 2 kkkIlITG~tGfiG~~l~~~L~~~g----~~vi~~~~~~-------------------~~~~~~~~~-~~~~~~~~---- 53 (315)
T d1e6ua_ 2 KQRVFIAGHRGMVGSAIRRQLEQRG----DVELVLRTRD-------------------ELNLLDSRA-VHDFFASE---- 53 (315)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCT----TEEEECCCTT-------------------TCCTTCHHH-HHHHHHHH----
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCc----CEEEEecCch-------------------hccccCHHH-HHHHHhhc----
Confidence 4789999999999999999999999 7887765432 257888777 65554321
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
.+|.++|+|+.... .. .........++.|+.++.+++.++... +-.++|++||.+.+.
T Consensus 54 ---~~d~v~~~a~~~~~-~~---~~~~~~~~~~~~Nv~gt~~ll~~a~~~---------------~v~~~i~~SS~~vyg 111 (315)
T d1e6ua_ 54 ---RIDQVYLAAAKVGG-IV---ANNTYPADFIYQNMMIESNIIHAAHQN---------------DVNKLLFLGSSCIYP 111 (315)
T ss_dssp ---CCSEEEECCCCCCC-HH---HHHHCHHHHHHHHHHHHHHHHHHHHHT---------------TCCEEEEECCGGGSC
T ss_pred ---CCCEEEEcchhccc-cc---cchhhHHHHHHHHHHHHHHHHHHHHHc---------------CCCEEEEECCceEcC
Confidence 39999999976532 11 122334455677999999888876554 345799999988654
Q ss_pred cccCC-------------CCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCC
Q psy11190 161 EDNTQ-------------GGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMG 209 (248)
Q Consensus 161 ~~~~~-------------~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~ 209 (248)
+.... ++...|+.+|.+.+.+++.+.++. |+++..+.|+.+..|..
T Consensus 112 ~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ilR~~~vyGp~~ 170 (315)
T d1e6ua_ 112 KLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQY---GRDYRSVMPTNLYGPHD 170 (315)
T ss_dssp TTCCSSBCGGGTTSSCCCGGGHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEESTTC
T ss_pred CCCCCCccCCccccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEeeccEECCCC
Confidence 32110 112359999999999999998764 79999999999988754
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.49 E-value=8.4e-14 Score=111.14 Aligned_cols=179 Identities=16% Similarity=0.117 Sum_probs=120.9
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|||||||.||++++++|+++|.. ..|++++|++..... ....++....+|+.+.++ +.+.+.
T Consensus 15 k~IlItGaTG~iG~~l~~~Ll~~g~~--~~v~~~~R~~~~~~~-----~~~~~i~~~~~D~~~~~~--------~~~~~~ 79 (232)
T d2bkaa1 15 KSVFILGASGETGRVLLKEILEQGLF--SKVTLIGRRKLTFDE-----EAYKNVNQEVVDFEKLDD--------YASAFQ 79 (232)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHHTCC--SEEEEEESSCCCCCS-----GGGGGCEEEECCGGGGGG--------GGGGGS
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCC--CEEEEEecChhhhcc-----cccceeeeeeeccccccc--------cccccc
Confidence 68999999999999999999999931 279999997654221 112356666677776555 233333
Q ss_pred CCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccc
Q psy11190 82 DQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIE 161 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~ 161 (248)
++|++||++|.... .........+|+.++..+++.+... +-.+++++|+.....
T Consensus 80 --~~d~vi~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~a~~~---------------~v~~fi~~Ss~~~~~- 133 (232)
T d2bkaa1 80 --GHDVGFCCLGTTRG--------KAGAEGFVRVDRDYVLKSAELAKAG---------------GCKHFNLLSSKGADK- 133 (232)
T ss_dssp --SCSEEEECCCCCHH--------HHHHHHHHHHHTHHHHHHHHHHHHT---------------TCCEEEEECCTTCCT-
T ss_pred --cccccccccccccc--------ccchhhhhhhcccccceeeeccccc---------------CccccccCCcccccc-
Confidence 48999999986432 2233445566887877777665432 456799999877643
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHhhccCCCe-EEEEecCcceecCCCCCC--------------------CCCchhhH
Q psy11190 162 DNTQGGFHPYRCSKAALNAATRSLSIDLKGDKI-IATAMHPGWVKTDMGGSN--------------------APLEVGAA 220 (248)
Q Consensus 162 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i-~v~~v~PG~v~t~~~~~~--------------------~~~~~~~~ 220 (248)
.....|+.+|...+...+.+ +. ++..+.||.+..+..... .+.+++++
T Consensus 134 ----~~~~~Y~~~K~~~E~~l~~~-------~~~~~~IlRP~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~dv 202 (232)
T d2bkaa1 134 ----SSNFLYLQVKGEVEAKVEEL-------KFDRYSVFRPGVLLCDRQESRPGEWLVRKFFGSLPDSWASGHSVPVVTV 202 (232)
T ss_dssp ----TCSSHHHHHHHHHHHHHHTT-------CCSEEEEEECCEEECTTGGGSHHHHHHHHHHCSCCTTGGGGTEEEHHHH
T ss_pred ----CccchhHHHHHHhhhccccc-------cccceEEecCceeecCCCcCcHHHHHHHHHhhccCCcccCCCeEEHHHH
Confidence 23456999999888655332 22 577889999877642211 13456899
Q ss_pred HHHHHHHhhhcc
Q psy11190 221 TAGIIQFIQSLG 232 (248)
Q Consensus 221 ~~~~~~~~~~~~ 232 (248)
+++++..+..+.
T Consensus 203 A~a~i~~~~~~~ 214 (232)
T d2bkaa1 203 VRAMLNNVVRPR 214 (232)
T ss_dssp HHHHHHHHTSCC
T ss_pred HHHHHHHHhcCc
Confidence 998888776643
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.49 E-value=1.8e-13 Score=116.85 Aligned_cols=175 Identities=15% Similarity=0.057 Sum_probs=121.8
Q ss_pred CceEEEecCCCchhHHHHHHHHh-CCCCCCceEEEeec---------CchhHHHHHHHHhh---------cCCceeEEee
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVG-LGNNQPAHIFATCR---------NKDKAVELLALAQQ---------HSNLHVIELD 61 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~-~g~~~~~~V~~~~r---------~~~~~~~~~~~~~~---------~~~~~~~~~D 61 (248)
| .+|||||+|.||++++++|++ .| +.|+++++ ..+..+........ ..++.++.+|
T Consensus 3 M-KVLITG~tGfIGs~lv~~LL~~~~----~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 77 (383)
T d1gy8a_ 3 M-RVLVCGGAGYIGSHFVRALLRDTN----HSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGD 77 (383)
T ss_dssp C-EEEEETTTSHHHHHHHHHHHHHCC----CEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESC
T ss_pred C-EEEEeCCCcHHHHHHHHHHHHhCC----CEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECc
Confidence 6 589999999999999999986 56 89999874 11222222221111 1257789999
Q ss_pred ccCCchhhhhHHHHhhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCC
Q psy11190 62 VTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAA 141 (248)
Q Consensus 62 ~~~~~~~v~~~~~~i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~ 141 (248)
++|.+. ++++++... ++|+|||.|+.... . ...+.....+.+|+.++.+++..+...
T Consensus 78 i~d~~~-l~~~~~~~~------~~d~ViH~Aa~~~~-~----~~~~~~~~~~~~N~~~t~~~l~~~~~~----------- 134 (383)
T d1gy8a_ 78 VRNEDF-LNGVFTRHG------PIDAVVHMCAFLAV-G----ESVRDPLKYYDNNVVGILRLLQAMLLH----------- 134 (383)
T ss_dssp TTCHHH-HHHHHHHSC------CCCEEEECCCCCCH-H----HHHHCHHHHHHHHHHHHHHHHHHHHHT-----------
T ss_pred ccCHHH-hhhhhhccc------eeehhhcccccccc-c----ccccccccccccccccccccchhhhcc-----------
Confidence 999887 777665443 48999999997643 1 123344566778899988888776653
Q ss_pred CCCCCCceEEEeecCCCcccc---------------cCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceec
Q psy11190 142 PLGSSRAAIVNVSSIMGSIED---------------NTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKT 206 (248)
Q Consensus 142 ~~~~~~~~iv~vss~~~~~~~---------------~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t 206 (248)
+..+++++++....... ....+...|+.+|.+.+.+++.+... +|+++.++.|+.+..
T Consensus 135 ----~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~gl~~~~lR~~~vyG 207 (383)
T d1gy8a_ 135 ----KCDKIIFSSSAAIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEA---YGIKGICLRYFNACG 207 (383)
T ss_dssp ----TCCEEEEEEEGGGTBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHH---HCCEEEEEEECEEEC
T ss_pred ----CCcccccccccccccccccccccccccccccccCCCCCCHHHhhHhHHHHHHHHHHHH---hCCCEEEEecceeec
Confidence 34567666665543311 01123567999999999999988765 468999999998877
Q ss_pred CCCC
Q psy11190 207 DMGG 210 (248)
Q Consensus 207 ~~~~ 210 (248)
|...
T Consensus 208 ~~~~ 211 (383)
T d1gy8a_ 208 AHED 211 (383)
T ss_dssp CCTT
T ss_pred cCcc
Confidence 6543
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.49 E-value=5.4e-14 Score=119.23 Aligned_cols=166 Identities=13% Similarity=0.038 Sum_probs=117.0
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|| +|||||+|.||++++++|+++| +.|+.+++....-. ........+..+|+.+.+. + .+.+.
T Consensus 16 MK-ILVTGgsGfIGs~lv~~L~~~g----~~V~~~d~~~~~~~-----~~~~~~~~~~~~D~~~~~~-~---~~~~~--- 78 (363)
T d2c5aa1 16 LK-ISITGAGGFIASHIARRLKHEG----HYVIASDWKKNEHM-----TEDMFCDEFHLVDLRVMEN-C---LKVTE--- 78 (363)
T ss_dssp CE-EEEETTTSHHHHHHHHHHHHTT----CEEEEEESSCCSSS-----CGGGTCSEEEECCTTSHHH-H---HHHHT---
T ss_pred CE-EEEECCCCHHHHHHHHHHHHCc----CEEEEEeCCCccch-----hhhcccCcEEEeechhHHH-H---HHHhh---
Confidence 55 9999999999999999999999 99999987543210 0112345677778776554 2 22222
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
++|.+||.|+...... ...+.....+..|+.++.+++.++... +-.++|++||.....
T Consensus 79 ---~~d~Vih~a~~~~~~~----~~~~~~~~~~~~n~~gt~~ll~~~~~~---------------~vk~~i~~SS~~~~~ 136 (363)
T d2c5aa1 79 ---GVDHVFNLAADMGGMG----FIQSNHSVIMYNNTMISFNMIEAARIN---------------GIKRFFYASSACIYP 136 (363)
T ss_dssp ---TCSEEEECCCCCCCHH----HHTTCHHHHHHHHHHHHHHHHHHHHHT---------------TCSEEEEEEEGGGSC
T ss_pred ---cCCeEeeccccccccc----ccccccccccccccchhhHHHHhHHhh---------------Ccccccccccccccc
Confidence 3999999998764311 122345556667888888887776554 446799999977654
Q ss_pred cccC---------------CCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCC
Q psy11190 161 EDNT---------------QGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208 (248)
Q Consensus 161 ~~~~---------------~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~ 208 (248)
.... ..+...|+.+|.+.+.+++.++++. |+++..+.|+.+..+.
T Consensus 137 ~~~~~~~~~~~~~~~e~~~~~p~~~Yg~sK~~~E~~~~~~~~~~---gl~~~ilR~~~vyG~~ 196 (363)
T d2c5aa1 137 EFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDF---GIECRIGRFHNIYGPF 196 (363)
T ss_dssp GGGSSSSSSCEECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTT
T ss_pred ccccccccccccccccCCcCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEeeeEeccC
Confidence 3211 1234579999999999999888664 6899999999888764
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.30 E-value=4.1e-12 Score=99.50 Aligned_cols=174 Identities=16% Similarity=0.161 Sum_probs=111.2
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
.|++|||||||.||++++++|+++|.. .+|+...|+... ...+ +..+..|..+ +.+.+ .
T Consensus 2 ~KkIlItGatG~iG~~lv~~L~~~~~~--~~v~~~~r~~~~---------~~~~---~~~~~~d~~~----~~~~~---~ 60 (212)
T d2a35a1 2 PKRVLLAGATGLTGEHLLDRILSEPTL--AKVIAPARKALA---------EHPR---LDNPVGPLAE----LLPQL---D 60 (212)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHCTTC--CEEECCBSSCCC---------CCTT---EECCBSCHHH----HGGGC---C
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCe--EEEEEEeCCchh---------hccc---ccccccchhh----hhhcc---c
Confidence 478999999999999999999999931 267777776432 1122 2334443322 11111 1
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
+ .+|.+|+++|.... . .........+|+.++.++++.+... +-.+++++||..+..
T Consensus 61 ~--~~d~vi~~~g~~~~-~------~~~~~~~~~~~~~~~~~~~~~a~~~---------------~v~~~i~~Ss~~~~~ 116 (212)
T d2a35a1 61 G--SIDTAFCCLGTTIK-E------AGSEEAFRAVDFDLPLAVGKRALEM---------------GARHYLVVSALGADA 116 (212)
T ss_dssp S--CCSEEEECCCCCHH-H------HSSHHHHHHHHTHHHHHHHHHHHHT---------------TCCEEEEECCTTCCT
T ss_pred c--chheeeeeeeeecc-c------cccccccccchhhhhhhcccccccc---------------ccccccccccccccc
Confidence 2 48999999986532 1 1122345566788877777765332 456799999876543
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCe-EEEEecCcceecCCCCCC---------C--------CCchhhHHH
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKI-IATAMHPGWVKTDMGGSN---------A--------PLEVGAATA 222 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i-~v~~v~PG~v~t~~~~~~---------~--------~~~~~~~~~ 222 (248)
.....|..+|...+...+. .+. +++.+.|+.+..+..... . +...+++++
T Consensus 117 -----~~~~~y~~~K~~~E~~l~~-------~~~~~~~I~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i~v~DvA~ 184 (212)
T d2a35a1 117 -----KSSIFYNRVKGELEQALQE-------QGWPQLTIARPSLLFGPREEFRLAEILAAPIARILPGKYHGIEACDLAR 184 (212)
T ss_dssp -----TCSSHHHHHHHHHHHHHTT-------SCCSEEEEEECCSEESTTSCEEGGGGTTCCCC----CHHHHHHHHHHHH
T ss_pred -----ccccchhHHHHHHhhhccc-------cccccceeeCCcceeCCcccccHHHHHHHHHhhccCCCCcEEEHHHHHH
Confidence 3356799999887765432 222 577889999876643221 0 245688888
Q ss_pred HHHHHhhhc
Q psy11190 223 GIIQFIQSL 231 (248)
Q Consensus 223 ~~~~~~~~~ 231 (248)
.++..+...
T Consensus 185 ai~~~~~~~ 193 (212)
T d2a35a1 185 ALWRLALEE 193 (212)
T ss_dssp HHHHHHTCC
T ss_pred HHHHHHcCC
Confidence 888887663
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=99.30 E-value=5.4e-12 Score=102.48 Aligned_cols=169 Identities=23% Similarity=0.248 Sum_probs=109.4
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|| +|||||||.||++++++|.++| +.|+.++|+. +|++|.++ ++++++..
T Consensus 2 MK-IlItGasGfiG~~l~~~L~~~g----~~Vi~~~r~~--------------------~D~~d~~~-~~~~l~~~---- 51 (281)
T d1vl0a_ 2 MK-ILITGANGQLGREIQKQLKGKN----VEVIPTDVQD--------------------LDITNVLA-VNKFFNEK---- 51 (281)
T ss_dssp EE-EEEESTTSHHHHHHHHHHTTSS----EEEEEECTTT--------------------CCTTCHHH-HHHHHHHH----
T ss_pred CE-EEEECCCCHHHHHHHHHHHhCC----CEEEEeechh--------------------ccCCCHHH-HHHHHHHc----
Confidence 66 9999999999999999999999 9999998853 58888777 66655433
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
++|+|||+|+.... +......+..+..|+.....+....... ...+++.||.....
T Consensus 52 ---~~d~vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~~~~~~~~~----------------~~~~~~~ss~~v~~ 107 (281)
T d1vl0a_ 52 ---KPNVVINCAAHTAV-----DKCEEQYDLAYKINAIGPKNLAAAAYSV----------------GAEIVQISTDYVFD 107 (281)
T ss_dssp ---CCSEEEECCCCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHHH----------------TCEEEEEEEGGGSC
T ss_pred ---CCCEEEeecccccc-----ccccccchhhcccccccccccccccccc----------------cccccccccceeee
Confidence 38999999987643 1122233444445555555544443332 33455555543322
Q ss_pred cc--------cCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC--------------------
Q psy11190 161 ED--------NTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN-------------------- 212 (248)
Q Consensus 161 ~~--------~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~-------------------- 212 (248)
.. .+..+...|+.+|...+.+.+.. +.+...+.|+++..+-.+..
T Consensus 108 ~~~~~~~~e~~~~~~~~~~~~~k~~~e~~~~~~-------~~~~~i~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (281)
T d1vl0a_ 108 GEAKEPITEFDEVNPQSAYGKTKLEGENFVKAL-------NPKYYIVRTAWLYGDGNNFVKTMINLGKTHDELKVVHDQV 180 (281)
T ss_dssp SCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHHH-------CSSEEEEEECSEESSSSCHHHHHHHHHHHCSEEEEESSCE
T ss_pred ccccccccccccccchhhhhhhhhHHHHHHHHh-------CCCccccceeEEeCCCcccccchhhhhccCCceeecCCce
Confidence 21 11124556888888877665433 34677788888876632110
Q ss_pred -CCCchhhHHHHHHHHhhh
Q psy11190 213 -APLEVGAATAGIIQFIQS 230 (248)
Q Consensus 213 -~~~~~~~~~~~~~~~~~~ 230 (248)
.....+++++.+...+..
T Consensus 181 ~~~i~v~D~~~~~~~~~~~ 199 (281)
T d1vl0a_ 181 GTPTSTVDLARVVLKVIDE 199 (281)
T ss_dssp ECCEEHHHHHHHHHHHHHH
T ss_pred eccchhhhhhhhhhhhhhh
Confidence 135688888888888766
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=99.25 E-value=4.6e-12 Score=103.47 Aligned_cols=133 Identities=19% Similarity=0.143 Sum_probs=89.8
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
|| +|||||+|-||+++++.|.++| ..|.+ ++.... +.+|++|.+. ++.+++..
T Consensus 1 MK-ILItG~tGfiG~~l~~~L~~~g----~~v~~-~~~~~~----------------~~~Dl~~~~~-~~~~i~~~---- 53 (298)
T d1n2sa_ 1 MN-ILLFGKTGQVGWELQRSLAPVG----NLIAL-DVHSKE----------------FCGDFSNPKG-VAETVRKL---- 53 (298)
T ss_dssp CE-EEEECTTSHHHHHHHHHTTTTS----EEEEE-CTTCSS----------------SCCCTTCHHH-HHHHHHHH----
T ss_pred CE-EEEECCCCHHHHHHHHHHHhCC----CEEEE-ECCCcc----------------ccCcCCCHHH-HHHHHHHc----
Confidence 76 9999999999999999999888 55544 443221 3579988877 66665543
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
++|+|||+||.... .. +.+.-...+..|+.++.++..++.. ...+++++||.....
T Consensus 54 ---~~D~Vih~Aa~~~~-~~----~~~~~~~~~~~n~~~~~~l~~~~~~----------------~~~~~~~~ss~~~~~ 109 (298)
T d1n2sa_ 54 ---RPDVIVNAAAHTAV-DK----AESEPELAQLLNATSVEAIAKAANE----------------TGAWVVHYSTDYVFP 109 (298)
T ss_dssp ---CCSEEEECCCCCCH-HH----HTTCHHHHHHHHTHHHHHHHHHHTT----------------TTCEEEEEEEGGGSC
T ss_pred ---CCCEEEEecccccc-cc----cccCccccccccccccccchhhhhc----------------ccccccccccccccc
Confidence 28999999997654 11 1223345566788888777766533 346688888776543
Q ss_pred ccc--------CCCCCccchhhHHHHHHHHHH
Q psy11190 161 EDN--------TQGGFHPYRCSKAALNAATRS 184 (248)
Q Consensus 161 ~~~--------~~~~~~~y~~sK~a~~~~~~~ 184 (248)
... +..+...|+.+|.+.+.+.+.
T Consensus 110 ~~~~~~~~E~~~~~p~~~y~~~k~~~e~~~~~ 141 (298)
T d1n2sa_ 110 GTGDIPWQETDATSPLNVYGKTKLAGEKALQD 141 (298)
T ss_dssp CCTTCCBCTTSCCCCSSHHHHHHHHHHHHHHH
T ss_pred CCCCCCCccccccCCCchHhhhhhhhhhhHHh
Confidence 321 112446799999988776544
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=99.19 E-value=4.8e-10 Score=93.97 Aligned_cols=191 Identities=17% Similarity=0.159 Sum_probs=119.2
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
.|+++||||||.||.+++++|+++| ++|+++.|+.++... .......++.++++|+.|..+.++ ..+
T Consensus 3 kktIlVtGatG~iG~~lv~~Ll~~G----~~V~~l~R~~~~~~~--~~~~~~~~v~~~~gD~~d~~~~~~-------~a~ 69 (350)
T d1xgka_ 3 KKTIAVVGATGRQGASLIRVAAAVG----HHVRAQVHSLKGLIA--EELQAIPNVTLFQGPLLNNVPLMD-------TLF 69 (350)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHTT----CCEEEEESCSCSHHH--HHHHTSTTEEEEESCCTTCHHHHH-------HHH
T ss_pred CCEEEEECCChHHHHHHHHHHHhCC----CeEEEEECCcchhhh--hhhcccCCCEEEEeeCCCcHHHHH-------HHh
Confidence 4899999999999999999999999 999999998876442 222234578999999998655122 222
Q ss_pred cCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCcc
Q psy11190 81 KDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSI 160 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~ 160 (248)
. +.|.++++...... .++....+++.+ ..+. +..++++.||.....
T Consensus 70 ~--~~~~~~~~~~~~~~-----------------~~~~~~~~~~~a----a~~a-----------gv~~~v~~Ss~~~~~ 115 (350)
T d1xgka_ 70 E--GAHLAFINTTSQAG-----------------DEIAIGKDLADA----AKRA-----------GTIQHYIYSSMPDHS 115 (350)
T ss_dssp T--TCSEEEECCCSTTS-----------------CHHHHHHHHHHH----HHHH-----------SCCSEEEEEECCCGG
T ss_pred c--CCceEEeecccccc-----------------hhhhhhhHHHHH----HHHh-----------CCCceEEEeeccccc
Confidence 2 47777776532111 122223333333 3332 455677888766554
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC-----------------C---------
Q psy11190 161 EDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA-----------------P--------- 214 (248)
Q Consensus 161 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~-----------------~--------- 214 (248)
.... .....|..+|...+.+.+.. +++...+.|+++..++..... +
T Consensus 116 ~~~~-~~~~~~~~~k~~~~~~~~~~-------~~~~~~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (350)
T d1xgka_ 116 LYGP-WPAVPMWAPKFTVENYVRQL-------GLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPW 187 (350)
T ss_dssp GTSS-CCCCTTTHHHHHHHHHHHTS-------SSCEEEEEECEEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEE
T ss_pred cCCc-ccchhhhhhHHHHHHHHHhh-------ccCceeeeeceeeccccccccccccccccccccceeeecccCCCcceE
Confidence 4321 33456777887766654432 456677778776554321110 0
Q ss_pred Cc-hhhHHHHHHHHhhhcccccccceeeeCCee
Q psy11190 215 LE-VGAATAGIIQFIQSLGEAHNGGFFEYTGKA 246 (248)
Q Consensus 215 ~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 246 (248)
.. .+++++.+...+.+.+....|..+..-|..
T Consensus 188 i~~~~Dva~~v~~~l~~~~~~~~G~~~~~~g~~ 220 (350)
T d1xgka_ 188 LDAEHDVGPALLQIFKDGPQKWNGHRIALTFET 220 (350)
T ss_dssp ECHHHHHHHHHHHHHHHCHHHHTTCEEEECSEE
T ss_pred EEeHHHHHHHHHHHHhCChhhcCCeEEEEeCCc
Confidence 11 367888888888776566677777766653
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.16 E-value=3.2e-14 Score=109.97 Aligned_cols=185 Identities=10% Similarity=0.041 Sum_probs=94.4
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHH-HHhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
||+ .|+||+|++|+++|+.|+++| ++|++.+|++++++++.+ +............|..+... ...........
T Consensus 1 Mki-~vigGaG~iG~alA~~la~~G----~~V~l~~R~~e~~~~l~~~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 74 (212)
T d1jaya_ 1 MRV-ALLGGTGNLGKGLALRLATLG----HEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNEDAAE-ACDIAVLTIPW 74 (212)
T ss_dssp CEE-EEETTTSHHHHHHHHHHHTTT----CEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEEHHHHHH-HCSEEEECSCH
T ss_pred CEE-EEEeCCcHHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHHHHhcCCCceEEeeccccccc-hhhhhhhheee
Confidence 774 566888999999999999999 999999999999888844 33333333333333322221 11111000000
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCc
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGS 159 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~ 159 (248)
+. .+|.+..+...... ......+...+......+..+...+.+.....+... .....+++.+....
T Consensus 75 ~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~ 140 (212)
T d1jaya_ 75 EH--AIDTARDLKNILRE-KIVVSPLVPVSRGAKGFTYSSERSAAEIVAEVLESE-----------KVVSALHTIPAARF 140 (212)
T ss_dssp HH--HHHHHHHTHHHHTT-SEEEECCCCEECCTTCCEECCSSCHHHHHHHHHTCS-----------CEEECCTTCCHHHH
T ss_pred ec--cchHHHHhhhhhcc-ccccccccccccccccccccccchhhhhhhhhhhhh-----------cccccceeecHHHh
Confidence 00 12222222221111 111112222333333344444444444444444432 12222222222222
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCC
Q psy11190 160 IEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 208 (248)
Q Consensus 160 ~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~ 208 (248)
... .....|...+++....++..+.++..+.+.++.+.||.+++..
T Consensus 141 ~~~---~~~~~~~~~~a~~~~~a~~~~~~~~~~~~g~~~~~~G~l~~a~ 186 (212)
T d1jaya_ 141 ANL---DEKFDWDVPVCGDDDESKKVVMSLISEIDGLRPLDAGPLSNSR 186 (212)
T ss_dssp HCT---TCCCCEEEEEEESCHHHHHHHHHHHHHSTTEEEEEEESGGGHH
T ss_pred cCc---ccccCccceEEeCCHHHHHHHHHHHhhCCCeEEEEeChHHHHH
Confidence 122 3344566666666666777666665556778899999887643
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=99.13 E-value=4e-10 Score=92.17 Aligned_cols=181 Identities=13% Similarity=0.057 Sum_probs=106.3
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhH--HHHHHH-HhhcCCceeEEeeccCCchhhhhHHHHhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKA--VELLAL-AQQHSNLHVIELDVTDFSKQQDVLFKDIS 77 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~--~~~~~~-~~~~~~~~~~~~D~~~~~~~v~~~~~~i~ 77 (248)
++++|||||||.||++++++|+++| +.|+++.|+.... .....+ .....++.++++|+.|.+. +...
T Consensus 3 k~KILVtGatG~iG~~l~~~L~~~G----~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~-~~~~----- 72 (312)
T d1qyda_ 3 KSRVLIVGGTGYIGKRIVNASISLG----HPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQR-LVDA----- 72 (312)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTT----CCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHH-HHHH-----
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCC----CEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchh-hhhh-----
Confidence 3569999999999999999999999 9999999976432 222111 1124578999999999776 3332
Q ss_pred hhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCC
Q psy11190 78 DVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIM 157 (248)
Q Consensus 78 ~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~ 157 (248)
+. +.+.++++++.... ..|..+...++..+. +. ...++++.||..
T Consensus 73 --~~--~~~~~~~~~~~~~~----------------~~~~~~~~~~l~~a~----~~-----------~~~~~v~~Ss~g 117 (312)
T d1qyda_ 73 --LK--QVDVVISALAGGVL----------------SHHILEQLKLVEAIK----EA-----------GNIKRFLPSEFG 117 (312)
T ss_dssp --HT--TCSEEEECCCCSSS----------------STTTTTHHHHHHHHH----HS-----------CCCSEEECSCCS
T ss_pred --cc--Ccchhhhhhhhccc----------------ccchhhhhHHHHHHH----Hh-----------cCCcEEEEeecc
Confidence 22 37888888764322 113334444444332 21 355677777654
Q ss_pred CcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCC------------------------C
Q psy11190 158 GSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN------------------------A 213 (248)
Q Consensus 158 ~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~------------------------~ 213 (248)
...... .....|...+......++.+.. ..++.+..+.|+.+..+..... .
T Consensus 118 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 192 (312)
T d1qyda_ 118 MDPDIM--EHALQPGSITFIDKRKVRRAIE---AASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGI 192 (312)
T ss_dssp SCTTSC--CCCCSSTTHHHHHHHHHHHHHH---HTTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEE
T ss_pred ccCCCc--ccccchhhhhhHHHHHHHHhhc---ccccceEEeccceeecCCccchhhHHHHhhhcccccccccccccccc
Confidence 332221 1112233333333333333322 2456777777877754321110 0
Q ss_pred CCchhhHHHHHHHHhhhc
Q psy11190 214 PLEVGAATAGIIQFIQSL 231 (248)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~ 231 (248)
....+++++.++..+..+
T Consensus 193 ~i~v~Dva~a~~~~l~~~ 210 (312)
T d1qyda_ 193 WVDEDDVGTYTIKSIDDP 210 (312)
T ss_dssp EECHHHHHHHHHHHTTCG
T ss_pred eeeHHHHHHHHHHHhcCc
Confidence 256899999999988663
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=99.05 E-value=9.1e-10 Score=89.34 Aligned_cols=176 Identities=14% Similarity=0.092 Sum_probs=105.1
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH---HHHH-hhcCCceeEEeeccCCchhhhhHHHHh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL---LALA-QQHSNLHVIELDVTDFSKQQDVLFKDI 76 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~---~~~~-~~~~~~~~~~~D~~~~~~~v~~~~~~i 76 (248)
+|++|||||||.||++++++|+++| +.|++++|+....... ..+. .....+.++.+|+.+... .... +
T Consensus 3 kkKILVtGatG~iG~~l~~~L~~~G----~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~---~ 74 (307)
T d1qyca_ 3 RSRILLIGATGYIGRHVAKASLDLG----HPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHAS-LVEA---V 74 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTT----CCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHH-HHHH---H
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCC----CeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchh-hhhh---h
Confidence 5789999999999999999999999 9999999986543221 1111 124468889999988665 3332 2
Q ss_pred hhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecC
Q psy11190 77 SDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSI 156 (248)
Q Consensus 77 ~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~ 156 (248)
. ..|.++++++.... .+...+.+++. .. ....+++.|+.
T Consensus 75 ~------~~~~vi~~~~~~~~--------------------~~~~~~~~a~~----~~-----------~~~~~~~~s~~ 113 (307)
T d1qyca_ 75 K------NVDVVISTVGSLQI--------------------ESQVNIIKAIK----EV-----------GTVKRFFPSEF 113 (307)
T ss_dssp H------TCSEEEECCCGGGS--------------------GGGHHHHHHHH----HH-----------CCCSEEECSCC
T ss_pred h------hceeeeeccccccc--------------------chhhHHHHHHH----Hh-----------ccccceeeecc
Confidence 2 37888988864321 12233333322 22 34456666664
Q ss_pred CCcccccCCCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecCCCCCCC-----------------------
Q psy11190 157 MGSIEDNTQGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA----------------------- 213 (248)
Q Consensus 157 ~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~~~~~~~----------------------- 213 (248)
...... .....+...+............+ .+++...+.|+.+..+......
T Consensus 114 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~i~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (307)
T d1qyca_ 114 GNDVDN---VHAVEPAKSVFEVKAKVRRAIEA---EGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVV 187 (307)
T ss_dssp SSCTTS---CCCCTTHHHHHHHHHHHHHHHHH---HTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEE
T ss_pred cccccc---ccccccccccccccccccchhhc---cCCCceecccceecCCCccchhhhhhhhhhcccceeeeccccccc
Confidence 433322 22333344444333333332222 3567778888877544221100
Q ss_pred CCchhhHHHHHHHHhhhc
Q psy11190 214 PLEVGAATAGIIQFIQSL 231 (248)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~ 231 (248)
....+++++.++..+..+
T Consensus 188 ~i~v~Dva~~~~~~l~~~ 205 (307)
T d1qyca_ 188 FVKEEDIGTFTIKAVDDP 205 (307)
T ss_dssp EECHHHHHHHHHTTSSCG
T ss_pred CCcHHHHHHHHHHHhcCh
Confidence 256899999999888654
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=99.03 E-value=9.4e-10 Score=89.65 Aligned_cols=164 Identities=15% Similarity=0.120 Sum_probs=95.0
Q ss_pred EEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhcCC
Q psy11190 4 ILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVKDQ 83 (248)
Q Consensus 4 ~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~~~ 83 (248)
+|||||+|.||.+++++|+++|. ..|+.+++-... .....+. ..++.+... .....+.+.......
T Consensus 2 ILITGgsGfIGs~lv~~L~~~g~---~~V~~~d~~~~~-~~~~~~~---------~~~~~~~~~-~~~~~~~~~~~~~~~ 67 (307)
T d1eq2a_ 2 IIVTGGAGFIGSNIVKALNDKGI---TDILVVDNLKDG-TKFVNLV---------DLNIADYMD-KEDFLIQIMAGEEFG 67 (307)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTC---CCEEEEECCSSG-GGGHHHH---------TSCCSEEEE-HHHHHHHHHTTCCCS
T ss_pred EEEecCccHHHHHHHHHHHhCCC---CeEEEEECCCCc-chhhccc---------ccchhhhcc-chHHHHHHhhhhccc
Confidence 79999999999999999999993 357776532221 1111111 122222222 223333333222112
Q ss_pred CccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCCccccc
Q psy11190 84 GLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMGSIEDN 163 (248)
Q Consensus 84 ~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~~~~~~ 163 (248)
.+++++|.|+.... .....+.....|+.+...+.+.+... .-++++.||.....+..
T Consensus 68 ~~~~i~~~aa~~~~-------~~~~~~~~~~~~~~~~~~~l~~~~~~----------------~i~~v~~ss~~~~~~~~ 124 (307)
T d1eq2a_ 68 DVEAIFHEGACSST-------TEWDGKYMMDNNYQYSKELLHYCLER----------------EIPFLYASSAATYGGRT 124 (307)
T ss_dssp SCCEEEECCSCCCT-------TCCCHHHHHHHTHHHHHHHHHHHHHH----------------TCCEEEEEEGGGGTTCC
T ss_pred chhhhhhhcccccc-------cccccccccccccccccccccccccc----------------ccccccccccccccccc
Confidence 48899999875432 11223334455666666665554332 23456666555444331
Q ss_pred C--------CCCCccchhhHHHHHHHHHHHHhhccCCCeEEEEecCcceecC
Q psy11190 164 T--------QGGFHPYRCSKAALNAATRSLSIDLKGDKIIATAMHPGWVKTD 207 (248)
Q Consensus 164 ~--------~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~PG~v~t~ 207 (248)
. ..+...|+.+|.+.+.+++.+..+. ++.+..+.|..+..|
T Consensus 125 ~~~~~~~~~~~~~~~Y~~~K~~~e~~~~~~~~~~---~~~~~~~r~~~vyGp 173 (307)
T d1eq2a_ 125 SDFIESREYEKPLNVYGYSKFLFDEYVRQILPEA---NSQIVGFRYFNVYGP 173 (307)
T ss_dssp SCBCSSGGGCCCSSHHHHHHHHHHHHHHHHGGGC---SSCEEEEEECEEESS
T ss_pred ccccccccccccccccccccchhhhhcccccccc---ccccccccceeEeec
Confidence 1 1345679999999999999887664 567777777766655
|
| >d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=97.78 E-value=0.0003 Score=50.21 Aligned_cols=115 Identities=17% Similarity=0.190 Sum_probs=70.9
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH-HHHHhh---cCCceeEEeeccCCchhhhhHHHHh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL-LALAQQ---HSNLHVIELDVTDFSKQQDVLFKDI 76 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~-~~~~~~---~~~~~~~~~D~~~~~~~v~~~~~~i 76 (248)
||.++| |+ |.+|..++..|+.++ ....+++.+.++++++.. .++... ..+...... +.++ +
T Consensus 1 mKI~II-Ga-G~VG~~~a~~l~~~~--l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~---~~~~--------~ 65 (140)
T d1a5za1 1 MKIGIV-GL-GRVGSSTAFALLMKG--FAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAG---DYAD--------L 65 (140)
T ss_dssp CEEEEE-CC-SHHHHHHHHHHHHHT--CCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEEC---CGGG--------G
T ss_pred CEEEEE-Cc-CHHHHHHHHHHHhCC--CCCEEEEEecccccccchhccccccccccccccccCC---cHHH--------h
Confidence 775555 75 899999999999988 457899999998776544 333221 122222222 2111 1
Q ss_pred hhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecC
Q psy11190 77 SDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSI 156 (248)
Q Consensus 77 ~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~ 156 (248)
. +.|++|.+||.... ...+..+. +. ....+.+.+.+.+.+.. +++.++++|.+
T Consensus 66 ~------~adivvitag~~~~----~g~~r~dl---~~----~N~~I~~~i~~~i~~~~----------p~aivivvtNP 118 (140)
T d1a5za1 66 K------GSDVVIVAAGVPQK----PGETRLQL---LG----RNARVMKEIARNVSKYA----------PDSIVIVVTNP 118 (140)
T ss_dssp T------TCSEEEECCCCCCC----SSCCHHHH---HH----HHHHHHHHHHHHHHHHC----------TTCEEEECSSS
T ss_pred c------CCCEEEEecccccC----CCcchhhh---hc----cccchHHHHHHHHHhcC----------CCcEEEEeCCc
Confidence 1 38999999997543 11222222 22 23456777777777753 67888888864
Q ss_pred C
Q psy11190 157 M 157 (248)
Q Consensus 157 ~ 157 (248)
.
T Consensus 119 v 119 (140)
T d1a5za1 119 V 119 (140)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Escherichia coli [TaxId: 562]
Probab=97.71 E-value=8.2e-05 Score=55.04 Aligned_cols=72 Identities=19% Similarity=0.354 Sum_probs=51.0
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|.++|.|+ ||.+++++-.|.+.| ..|+++.|+.++++++.+.......+..+ +.++ . . .
T Consensus 19 k~vlIlGa-GGaarai~~al~~~g----~~i~I~nRt~~ka~~l~~~~~~~~~~~~~-----~~~~-~-------~---~ 77 (170)
T d1nyta1 19 LRILLIGA-GGASRGVLLPLLSLD----CAVTITNRTVSRAEELAKLFAHTGSIQAL-----SMDE-L-------E---G 77 (170)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTT----CEEEEECSSHHHHHHHHHHTGGGSSEEEC-----CSGG-G-------T---T
T ss_pred CEEEEECC-cHHHHHHHHHhcccc----eEEEeccchHHHHHHHHHHHhhccccccc-----cccc-c-------c---c
Confidence 67888886 888999999999999 78999999999988886655433332222 1111 0 0 0
Q ss_pred CCCccEEEeccccC
Q psy11190 82 DQGLNVLVNNAGIA 95 (248)
Q Consensus 82 ~~~iD~lv~~ag~~ 95 (248)
...|++||+....
T Consensus 78 -~~~dliIN~Tp~G 90 (170)
T d1nyta1 78 -HEFDLIINATSSG 90 (170)
T ss_dssp -CCCSEEEECCSCG
T ss_pred -cccceeecccccC
Confidence 1489999997544
|
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.68 E-value=7.9e-05 Score=55.22 Aligned_cols=77 Identities=18% Similarity=0.402 Sum_probs=53.6
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
.++||+||+|++|...+..+...| ++|+.+++++++.+.+.++. .. . ..|.++.+- .+ ++.+..+
T Consensus 30 ~~VlV~Ga~G~vG~~aiq~a~~~G----~~vi~~~~~~~~~~~~~~~G---a~-~--vi~~~~~~~-~~----~i~~~t~ 94 (174)
T d1yb5a2 30 ESVLVHGASGGVGLAACQIARAYG----LKILGTAGTEEGQKIVLQNG---AH-E--VFNHREVNY-ID----KIKKYVG 94 (174)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTT----CEEEEEESSHHHHHHHHHTT---CS-E--EEETTSTTH-HH----HHHHHHC
T ss_pred CEEEEEeccccccccccccccccC----cccccccccccccccccccC---cc-c--ccccccccH-HH----Hhhhhhc
Confidence 479999999999999999888888 89999998877655444321 11 1 246665443 33 3444433
Q ss_pred CCCccEEEeccc
Q psy11190 82 DQGLNVLVNNAG 93 (248)
Q Consensus 82 ~~~iD~lv~~ag 93 (248)
..++|+++.+.|
T Consensus 95 ~~g~d~v~d~~g 106 (174)
T d1yb5a2 95 EKGIDIIIEMLA 106 (174)
T ss_dssp TTCEEEEEESCH
T ss_pred cCCceEEeeccc
Confidence 335999999876
|
| >d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Lactobacillus pentosus [TaxId: 1589]
Probab=97.67 E-value=0.00021 Score=51.48 Aligned_cols=114 Identities=12% Similarity=0.096 Sum_probs=67.3
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH-HHHHh---hcCCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL-LALAQ---QHSNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~-~~~~~---~~~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
.+.|.|+ |.+|..+|..|+.+| ....|++++++++.++.. .++.. ..........|. ++ +.
T Consensus 7 KI~IIGa-G~VG~~~A~~l~~~~--~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~---~~--------~~- 71 (146)
T d1ez4a1 7 KVVLVGD-GAVGSSYAFAMAQQG--IAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEY---SD--------CK- 71 (146)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHT--CCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCG---GG--------GT-
T ss_pred EEEEECC-CHHHHHHHHHHHhcC--CCcEEEEeecccchhHHHHHHHhccccccCCceEeeccH---HH--------hc-
Confidence 5667785 999999999999988 346899999998766544 23322 122223333332 22 11
Q ss_pred hhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCC
Q psy11190 79 VVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIM 157 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~ 157 (248)
..|++|.+||..... ..+. ...+. ....+.+...+.+.+.. +++.++++|.+.
T Consensus 72 -----~adivvitag~~~~~----g~~r---~~l~~----~N~~i~~~~~~~i~~~~----------p~aivivvtNPv 124 (146)
T d1ez4a1 72 -----DADLVVITAGAPQKP----GESR---LDLVN----KNLNILSSIVKPVVDSG----------FDGIFLVAANPV 124 (146)
T ss_dssp -----TCSEEEECCCC-----------------CHH----HHHHHHHHHHHHHHHTT----------CCSEEEECSSSH
T ss_pred -----cccEEEEecccccCC----CCCH---HHHHH----HHHHHHHHHHHHHhhcC----------CCcEEEEeCCcc
Confidence 389999999865431 1111 12222 33456677777776653 577788887644
|
| >d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Putative shikimate dehydrogenase YdiB species: Escherichia coli [TaxId: 562]
Probab=97.64 E-value=9.7e-05 Score=55.27 Aligned_cols=80 Identities=18% Similarity=0.196 Sum_probs=57.1
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHH---hhcCCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALA---QQHSNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
|+++|.|+ ||.|++++..|++.|. ..+++..|+.++.+.+..+. ...........|+.+.++ . .+
T Consensus 19 k~vlIlGa-GGaarai~~al~~~g~---~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~-------~~ 86 (182)
T d1vi2a1 19 KTMVLLGA-GGASTAIGAQGAIEGL---KEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQA-F-------AE 86 (182)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTC---SEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHH-H-------HH
T ss_pred CEEEEECC-cHHHHHHHHHHhhcCC---ceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccc-h-------hh
Confidence 67899888 7999999999999995 69999999988777654432 222344455677776554 2 22
Q ss_pred hhcCCCccEEEeccccC
Q psy11190 79 VVKDQGLNVLVNNAGIA 95 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~ 95 (248)
... ..|++||+....
T Consensus 87 ~~~--~~diiIN~Tp~G 101 (182)
T d1vi2a1 87 ALA--SADILTNGTKVG 101 (182)
T ss_dssp HHH--TCSEEEECSSTT
T ss_pred hhc--ccceeccccCCc
Confidence 222 389999998653
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=97.64 E-value=9.7e-05 Score=54.86 Aligned_cols=78 Identities=17% Similarity=0.244 Sum_probs=56.2
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
++++|+||+|++|..++......| ++|+.+++++++.+.+.++.. . ...|.++.+- .++ +.+.-+
T Consensus 30 ~~Vlv~ga~g~vG~~~iqlak~~G----a~Vi~~~~s~~k~~~~~~lGa---~---~vi~~~~~d~-~~~----v~~~t~ 94 (179)
T d1qora2 30 EQFLFHAAAGGVGLIACQWAKALG----AKLIGTVGTAQKAQSALKAGA---W---QVINYREEDL-VER----LKEITG 94 (179)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHHT----CEEEEEESSHHHHHHHHHHTC---S---EEEETTTSCH-HHH----HHHHTT
T ss_pred CEEEEEccccccchHHHHHHHHhC----CeEeecccchHHHHHHHhcCC---e---EEEECCCCCH-HHH----HHHHhC
Confidence 479999999999999999888888 899999999988776655421 1 2246666543 333 343333
Q ss_pred CCCccEEEecccc
Q psy11190 82 DQGLNVLVNNAGI 94 (248)
Q Consensus 82 ~~~iD~lv~~ag~ 94 (248)
..++|+++.+.|.
T Consensus 95 g~g~d~v~d~~g~ 107 (179)
T d1qora2 95 GKKVRVVYDSVGR 107 (179)
T ss_dssp TCCEEEEEECSCG
T ss_pred CCCeEEEEeCccH
Confidence 2359999998874
|
| >d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=97.63 E-value=8.9e-05 Score=55.39 Aligned_cols=78 Identities=12% Similarity=0.197 Sum_probs=53.6
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
.++||+||+|++|...+......| ++|+.++++.++.+.+.+. +.-++ .|..+... .+.+.+ ..+
T Consensus 31 ~~VlV~ga~ggvG~~aiqlak~~G----a~vi~~~~~~~~~~~~~~~----Ga~~v--i~~~~~~~-~~~~~~----~~~ 95 (182)
T d1v3va2 31 ETVLVSAAAGAVGSVVGQIAKLKG----CKVVGAAGSDEKIAYLKQI----GFDAA--FNYKTVNS-LEEALK----KAS 95 (182)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTT----CEEEEEESSHHHHHHHHHT----TCSEE--EETTSCSC-HHHHHH----HHC
T ss_pred CEEEEEeCCCchhHHHHHHHHccC----CEEEEeCCCHHHHHHHHhh----hhhhh--cccccccH-HHHHHH----Hhh
Confidence 479999999999999999888888 9999999988775554433 21122 45555444 333322 222
Q ss_pred CCCccEEEecccc
Q psy11190 82 DQGLNVLVNNAGI 94 (248)
Q Consensus 82 ~~~iD~lv~~ag~ 94 (248)
..++|+++.+.|.
T Consensus 96 ~~Gvd~v~D~vG~ 108 (182)
T d1v3va2 96 PDGYDCYFDNVGG 108 (182)
T ss_dssp TTCEEEEEESSCH
T ss_pred cCCCceeEEecCc
Confidence 2359999999873
|
| >d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Haemophilus influenzae [TaxId: 727]
Probab=97.62 E-value=0.00013 Score=54.07 Aligned_cols=73 Identities=21% Similarity=0.313 Sum_probs=52.3
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|.++|.|+ ||.+++++..|.+.+ .+|+++.|+.++++.+.+......++..+..|-.+..
T Consensus 19 k~vlIlGa-GGaarai~~aL~~~~----~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~~~~~--------------- 78 (171)
T d1p77a1 19 QHVLILGA-GGATKGVLLPLLQAQ----QNIVLANRTFSKTKELAERFQPYGNIQAVSMDSIPLQ--------------- 78 (171)
T ss_dssp CEEEEECC-SHHHHTTHHHHHHTT----CEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGCCCS---------------
T ss_pred CEEEEECC-cHHHHHHHHHHcccC----ceeeeccchHHHHHHHHHHHhhccccchhhhcccccc---------------
Confidence 56777765 788999999999866 8999999999998888666654444444443322211
Q ss_pred CCCccEEEeccccCC
Q psy11190 82 DQGLNVLVNNAGIAA 96 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~ 96 (248)
..|++||+.....
T Consensus 79 --~~diiIN~tp~g~ 91 (171)
T d1p77a1 79 --TYDLVINATSAGL 91 (171)
T ss_dssp --CCSEEEECCCC--
T ss_pred --ccceeeecccccc
Confidence 3899999987543
|
| >d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH species: Lactobacillus confusus [TaxId: 1583]
Probab=97.60 E-value=0.00061 Score=48.91 Aligned_cols=119 Identities=13% Similarity=0.127 Sum_probs=70.7
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH-HHHHhhc--C--CceeEEeeccCCchhhhhHHHHh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL-LALAQQH--S--NLHVIELDVTDFSKQQDVLFKDI 76 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~-~~~~~~~--~--~~~~~~~D~~~~~~~v~~~~~~i 76 (248)
|.+.|+|+ |.+|..+|..|+.+|. ...+++.+.+.++++.. .++.... . ...... .|.+. +
T Consensus 2 kKI~IIGa-G~VG~~~a~~l~~~~~--~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~---~d~~~--------l 67 (146)
T d1hyha1 2 RKIGIIGL-GNVGAAVAHGLIAQGV--ADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVI---NDWAA--------L 67 (146)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTC--CSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEE---SCGGG--------G
T ss_pred CeEEEECc-CHHHHHHHHHHHhcCC--CceEEEEecccchhhhHHHhhhccccccCCccceec---cCHHH--------h
Confidence 56777885 8999999999999883 36899999998876544 2333221 1 222222 22222 1
Q ss_pred hhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecC
Q psy11190 77 SDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSI 156 (248)
Q Consensus 77 ~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~ 156 (248)
. +-|++|..||.......-...+. ...+. ....+.+.+.+.+.+.. +++.++++|.+
T Consensus 68 ~------~adiVVitaG~~~~~~~~~g~~R---~~l~~----~N~~i~~~i~~~i~~~~----------p~aivivvtNP 124 (146)
T d1hyha1 68 A------DADVVISTLGNIKLQQDNPTGDR---FAELK----FTSSMVQSVGTNLKESG----------FHGVLVVISNP 124 (146)
T ss_dssp T------TCSEEEECCSCGGGTC----------CTTHH----HHHHHHHHHHHHHHHTT----------CCSEEEECSSS
T ss_pred c------cccEEEEeccccccccccCCccH---HHHHH----HHHHHHHHHHHHHhhcC----------CCeEEEEecCc
Confidence 1 38999999997542111111111 11222 24456777777777653 67888888875
Q ss_pred C
Q psy11190 157 M 157 (248)
Q Consensus 157 ~ 157 (248)
.
T Consensus 125 v 125 (146)
T d1hyha1 125 V 125 (146)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chlorobium vibrioforme [TaxId: 1098]
Probab=97.59 E-value=0.00031 Score=50.21 Aligned_cols=116 Identities=16% Similarity=0.167 Sum_probs=69.3
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH-HHHHhh----cCCceeEEeeccCCchhhhhHHHH
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL-LALAQQ----HSNLHVIELDVTDFSKQQDVLFKD 75 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~-~~~~~~----~~~~~~~~~D~~~~~~~v~~~~~~ 75 (248)
||.++| |+ |.+|..++..|+.++ ....+++.+.+++.++.. ..+... ..+..+... .+.+.
T Consensus 1 mKI~II-Ga-G~VG~~la~~l~~~~--l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~--~~~~~-------- 66 (142)
T d1guza1 1 MKITVI-GA-GNVGATTAFRLAEKQ--LARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDYAD-------- 66 (142)
T ss_dssp CEEEEE-CC-SHHHHHHHHHHHHTT--CCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCGGG--------
T ss_pred CEEEEE-Cc-CHHHHHHHHHHHhCC--CCceEEEeccccccchhhhhhhhcccchhcccceEEec--CCHHH--------
Confidence 775554 85 999999999999998 346899999998876544 222211 112222211 22221
Q ss_pred hhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeec
Q psy11190 76 ISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSS 155 (248)
Q Consensus 76 i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss 155 (248)
+. +.|++|.+||.... . ..+..++ +.....+.+...+.+.+.. +++.++++|.
T Consensus 67 ~~------dadvvvitag~~~~---~-g~~r~~l-------~~~N~~i~~~i~~~i~~~~----------p~aivivvtN 119 (142)
T d1guza1 67 TA------NSDIVIITAGLPRK---P-GMTREDL-------LMKNAGIVKEVTDNIMKHS----------KNPIIIVVSN 119 (142)
T ss_dssp GT------TCSEEEECCSCCCC---T-TCCHHHH-------HHHHHHHHHHHHHHHHHHC----------SSCEEEECCS
T ss_pred hc------CCeEEEEEEecCCC---C-CCchHHH-------HHHHHHHHHHHHHHhhccC----------CCeEEEEecC
Confidence 11 38999999997532 1 1122221 2244456666777766653 5778888876
Q ss_pred CC
Q psy11190 156 IM 157 (248)
Q Consensus 156 ~~ 157 (248)
+.
T Consensus 120 Pv 121 (142)
T d1guza1 120 PL 121 (142)
T ss_dssp SH
T ss_pred Ch
Confidence 44
|
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.54 E-value=9.4e-05 Score=55.12 Aligned_cols=77 Identities=19% Similarity=0.309 Sum_probs=53.0
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
.++||+||+|++|...+..+...| +.|++++++.++.+.+.+ .+--+ ..|..+.+- . +++.+..+
T Consensus 27 ~~VlI~ga~g~vG~~~iqla~~~g----~~vi~~~~~~~~~~~l~~----~Ga~~--vi~~~~~~~-~----~~v~~~t~ 91 (183)
T d1pqwa_ 27 ERVLIHSATGGVGMAAVSIAKMIG----ARIYTTAGSDAKREMLSR----LGVEY--VGDSRSVDF-A----DEILELTD 91 (183)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHHT----CEEEEEESSHHHHHHHHT----TCCSE--EEETTCSTH-H----HHHHHHTT
T ss_pred CEEEEECCCCCcccccchhhcccc----ccceeeeccccccccccc----ccccc--cccCCccCH-H----HHHHHHhC
Confidence 479999999999999999998888 899999988776554332 22112 235554432 2 33444433
Q ss_pred CCCccEEEeccc
Q psy11190 82 DQGLNVLVNNAG 93 (248)
Q Consensus 82 ~~~iD~lv~~ag 93 (248)
..++|+++.+.|
T Consensus 92 ~~g~d~v~d~~g 103 (183)
T d1pqwa_ 92 GYGVDVVLNSLA 103 (183)
T ss_dssp TCCEEEEEECCC
T ss_pred CCCEEEEEeccc
Confidence 236999999887
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=97.54 E-value=7.7e-05 Score=52.75 Aligned_cols=73 Identities=21% Similarity=0.176 Sum_probs=53.7
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
+.++|.|+ |.+|+.+++.|.++| ..|++++++++..+.+.+. ....++..|.++.+. .+.+ +
T Consensus 1 M~IvI~G~-G~~G~~la~~L~~~g----~~v~vid~d~~~~~~~~~~----~~~~vi~Gd~~~~~~-l~~~--------~ 62 (132)
T d1lssa_ 1 MYIIIAGI-GRVGYTLAKSLSEKG----HDIVLIDIDKDICKKASAE----IDALVINGDCTKIKT-LEDA--------G 62 (132)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHH----CSSEEEESCTTSHHH-HHHT--------T
T ss_pred CEEEEECC-CHHHHHHHHHHHHCC----CCcceecCChhhhhhhhhh----hhhhhccCcccchhh-hhhc--------C
Confidence 14778887 999999999999999 9999999999887765332 256788899998766 3322 1
Q ss_pred CCCccEEEecc
Q psy11190 82 DQGLNVLVNNA 92 (248)
Q Consensus 82 ~~~iD~lv~~a 92 (248)
-...|.++...
T Consensus 63 i~~a~~vv~~t 73 (132)
T d1lssa_ 63 IEDADMYIAVT 73 (132)
T ss_dssp TTTCSEEEECC
T ss_pred hhhhhhhcccC
Confidence 11367777653
|
| >d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Probab=97.52 E-value=0.00017 Score=54.15 Aligned_cols=85 Identities=15% Similarity=0.133 Sum_probs=55.1
Q ss_pred eEEE-ecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 3 SILI-TGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 3 ~~lV-tGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
+++| +||+|++|.+.+...-..| ++|+.+.|+.+..++..+.....+--+++..|-.+..+ ....++++.+..+
T Consensus 31 ~vli~~ga~g~vG~~aiqlAk~~G----a~vI~~v~~~~~~~~~~~~~~~lGad~vi~~~~~~~~~-~~~~v~~~~~~~g 105 (189)
T d1gu7a2 31 DWFIQNGGTSAVGKYASQIGKLLN----FNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSRE-FGPTIKEWIKQSG 105 (189)
T ss_dssp CEEEESCTTSHHHHHHHHHHHHHT----CEEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGG-GHHHHHHHHHHHT
T ss_pred EEEEEeCCCchHHHHHHHHHhhcC----CeEEEEEecccccchHHhhhhhccccEEEeccccchhH-HHHHHHHHHhhcc
Confidence 4455 7999999999888888788 89999999887777665444333333344333333344 3444444444334
Q ss_pred CCCccEEEeccc
Q psy11190 82 DQGLNVLVNNAG 93 (248)
Q Consensus 82 ~~~iD~lv~~ag 93 (248)
. ++|+++.+.|
T Consensus 106 ~-~vdvv~D~vg 116 (189)
T d1gu7a2 106 G-EAKLALNCVG 116 (189)
T ss_dssp C-CEEEEEESSC
T ss_pred C-CceEEEECCC
Confidence 2 5999998876
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=97.51 E-value=0.00029 Score=51.67 Aligned_cols=81 Identities=17% Similarity=0.288 Sum_probs=57.0
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
.+++|+| +|++|...+..+...| ++|+++++++++++.+.++. .. ..+..|-.+ ++ .....+.+.+..+
T Consensus 28 ~~vlV~G-~G~vG~~~~~~ak~~G----a~vi~v~~~~~r~~~a~~~g---a~-~~~~~~~~~-~~-~~~~~~~~~~~~g 96 (170)
T d1e3ja2 28 TTVLVIG-AGPIGLVSVLAAKAYG----AFVVCTARSPRRLEVAKNCG---AD-VTLVVDPAK-EE-ESSIIERIRSAIG 96 (170)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHTT---CS-EEEECCTTT-SC-HHHHHHHHHHHSS
T ss_pred CEEEEEc-ccccchhhHhhHhhhc----ccccccchHHHHHHHHHHcC---Cc-EEEeccccc-cc-cchhhhhhhcccc
Confidence 3689997 6899999999998888 89999999998876554432 11 222233332 23 4556666776666
Q ss_pred CCCccEEEecccc
Q psy11190 82 DQGLNVLVNNAGI 94 (248)
Q Consensus 82 ~~~iD~lv~~ag~ 94 (248)
. ++|++|.++|.
T Consensus 97 ~-g~D~vid~~g~ 108 (170)
T d1e3ja2 97 D-LPNVTIDCSGN 108 (170)
T ss_dssp S-CCSEEEECSCC
T ss_pred c-CCceeeecCCC
Confidence 3 69999999874
|
| >d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=97.49 E-value=0.00072 Score=48.64 Aligned_cols=115 Identities=12% Similarity=0.172 Sum_probs=70.5
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH-HHHHhhc----CCceeEEeeccCCchhhhhHHHHhh
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL-LALAQQH----SNLHVIELDVTDFSKQQDVLFKDIS 77 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~-~~~~~~~----~~~~~~~~D~~~~~~~v~~~~~~i~ 77 (248)
.+.|+|+ |.+|..+|..|+.++ ....+++.+++++.++.. .++.... ..+.+...|. +. +.
T Consensus 8 KI~IiGa-G~vG~~~a~~l~~~~--l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~---~~--------l~ 73 (148)
T d1ldna1 8 RVVVIGA-GFVGASYVFALMNQG--IADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY---DD--------CR 73 (148)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHT--CCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG---GG--------TT
T ss_pred eEEEECc-CHHHHHHHHHHHhcC--CCceEEEEeeccccccchhccHhhCccccCCCeEEEECCH---HH--------hc
Confidence 5778896 999999999999988 346899999998775544 3333211 1222222222 11 11
Q ss_pred hhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCC
Q psy11190 78 DVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIM 157 (248)
Q Consensus 78 ~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~ 157 (248)
+.|++|.++|..... .+ +..+ .+ .....+.+.+.+.+.+.. +++.++++|.+.
T Consensus 74 ------daDvvvitag~~~~~---~~-~R~d---l~----~~N~~i~~~i~~~i~~~~----------p~a~~ivvtNPv 126 (148)
T d1ldna1 74 ------DADLVVICAGANQKP---GE-TRLD---LV----DKNIAIFRSIVESVMASG----------FQGLFLVATNPV 126 (148)
T ss_dssp ------TCSEEEECCSCCCCT---TT-CSGG---GH----HHHHHHHHHHHHHHHHHT----------CCSEEEECSSSH
T ss_pred ------cceeEEEeccccccc---Cc-chhH---HH----HHHHHHHHHHHHHHHhhC----------CCceEEEecCcc
Confidence 389999999975431 11 2222 11 234456666677766653 678888888755
Q ss_pred C
Q psy11190 158 G 158 (248)
Q Consensus 158 ~ 158 (248)
.
T Consensus 127 d 127 (148)
T d1ldna1 127 D 127 (148)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=97.44 E-value=0.00089 Score=47.89 Aligned_cols=120 Identities=16% Similarity=0.196 Sum_probs=71.2
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhcC
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVKD 82 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~~ 82 (248)
.+.|+||+|.+|.++|..|+.+|. -..+++.+.+..+.+.+ ++.. .........-+. ..+ ..+.+.
T Consensus 2 Kv~IiGA~G~VG~~~A~~l~~~~~--~~elvLiDi~~~~~~a~-Dl~~-~~~~~~~~~~~~-~~~--------~~~~~~- 67 (144)
T d1mlda1 2 KVAVLGASGGIGQPLSLLLKNSPL--VSRLTLYDIAHTPGVAA-DLSH-IETRATVKGYLG-PEQ--------LPDCLK- 67 (144)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTT--CSEEEEEESSSHHHHHH-HHTT-SSSSCEEEEEES-GGG--------HHHHHT-
T ss_pred eEEEECCCChHHHHHHHHHHhCCc--cceEEEEeccccchhhH-HHhh-hhhhcCCCeEEc-CCC--------hHHHhC-
Confidence 478899999999999999999983 46799999876543332 2221 111111222222 121 111122
Q ss_pred CCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 83 QGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 83 ~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
+.|++|..||.... + ..+..++ +. ....+.+...+.+.+.. +++.++++|.+..
T Consensus 68 -~aDivVitag~~~~--~--g~sR~~l---l~----~N~~i~~~i~~~i~~~~----------p~~iiivvtNPvD 121 (144)
T d1mlda1 68 -GCDVVVIPAGVPRK--P--GMTRDDL---FN----TNATIVATLTAACAQHC----------PDAMICIISNPVN 121 (144)
T ss_dssp -TCSEEEECCSCCCC--T--TCCGGGG---HH----HHHHHHHHHHHHHHHHC----------TTSEEEECSSCHH
T ss_pred -CCCEEEECCCcCCC--C--CCCcchH---HH----HHHHHHHHHHHHHHhcC----------CCeEEEEecCchh
Confidence 38999999996432 1 2233332 22 34455666777776653 6788899887554
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=97.42 E-value=0.00037 Score=51.80 Aligned_cols=81 Identities=19% Similarity=0.320 Sum_probs=55.6
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
.+++|+|+ |++|...+..+...|+ .+|+++++++++.+.+.++. .. ...|..+.+ .....+.+.+..+
T Consensus 30 ~~VlV~Ga-G~iG~~~~~~ak~~Ga---~~Vi~~~~~~~~~~~a~~lG---a~---~vi~~~~~~--~~~~~~~i~~~~~ 97 (182)
T d1vj0a2 30 KTVVIQGA-GPLGLFGVVIARSLGA---ENVIVIAGSPNRLKLAEEIG---AD---LTLNRRETS--VEERRKAIMDITH 97 (182)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTB---SEEEEEESCHHHHHHHHHTT---CS---EEEETTTSC--HHHHHHHHHHHTT
T ss_pred CEEEEECC-Cccchhheeccccccc---cccccccccccccccccccc---ce---EEEeccccc--hHHHHHHHHHhhC
Confidence 47899987 8999999999998893 38999999998876554431 11 223555433 3444455555543
Q ss_pred CCCccEEEecccc
Q psy11190 82 DQGLNVLVNNAGI 94 (248)
Q Consensus 82 ~~~iD~lv~~ag~ 94 (248)
..++|++|.+.|.
T Consensus 98 ~~g~Dvvid~vG~ 110 (182)
T d1vj0a2 98 GRGADFILEATGD 110 (182)
T ss_dssp TSCEEEEEECSSC
T ss_pred CCCceEEeecCCc
Confidence 3359999999875
|
| >d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Haloarcula marismortui [TaxId: 2238]
Probab=97.39 E-value=0.0032 Score=44.73 Aligned_cols=115 Identities=13% Similarity=0.063 Sum_probs=70.5
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCc--hhHHHH-HHHHh---hcCCceeEEeeccCCchhhhhHHHHh
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNK--DKAVEL-LALAQ---QHSNLHVIELDVTDFSKQQDVLFKDI 76 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~--~~~~~~-~~~~~---~~~~~~~~~~D~~~~~~~v~~~~~~i 76 (248)
.+.|+|++|.+|..+|..|+.++. ...+++.+.+. +.++.. .++.. ...+..+...|. ++ +
T Consensus 2 KV~IiGaaG~VG~~~A~~l~~~~l--~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~---~~--------~ 68 (142)
T d1o6za1 2 KVSVVGAAGTVGAAAGYNIALRDI--ADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGY---ED--------T 68 (142)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC--CSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCG---GG--------G
T ss_pred eEEEECCCCcHHHHHHHHHHhCCC--CCEEEEEecCCcccccceeecchhhcccccCCceEeeCCH---HH--------h
Confidence 477899999999999999999994 46799998643 222211 22221 122333322222 22 1
Q ss_pred hhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecC
Q psy11190 77 SDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSI 156 (248)
Q Consensus 77 ~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~ 156 (248)
. +.|++|..||.... ...+..+ . +....-+.+.+.+.+.+.. +++.++.+|.+
T Consensus 69 ~------~aDiVvitaG~~~~----~g~~R~d---l----~~~N~~I~~~i~~~i~~~~----------p~~i~ivvtNP 121 (142)
T d1o6za1 69 A------GSDVVVITAGIPRQ----PGQTRID---L----AGDNAPIMEDIQSSLDEHN----------DDYISLTTSNP 121 (142)
T ss_dssp T------TCSEEEECCCCCCC----TTCCHHH---H----HHHHHHHHHHHHHHHHTTC----------SCCEEEECCSS
T ss_pred h------hcCEEEEecccccc----cCCchhh---H----HHHHHHHHHHHHHHHHhcC----------CCceEEEecCh
Confidence 1 38999999996432 1123333 2 2245567778888887753 57888888765
Q ss_pred C
Q psy11190 157 M 157 (248)
Q Consensus 157 ~ 157 (248)
.
T Consensus 122 v 122 (142)
T d1o6za1 122 V 122 (142)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamyl tRNA-reductase middle domain species: Archaeon Methanopyrus kandleri [TaxId: 2320]
Probab=97.37 E-value=0.00047 Score=50.28 Aligned_cols=72 Identities=24% Similarity=0.348 Sum_probs=51.2
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
.|+++|.|+ |++|+.+++.|..+|+ .++.++.|+.++++++.+... ... .+.++ +.+.+.
T Consensus 24 ~~~ilviGa-G~~g~~v~~~L~~~g~---~~i~v~nRt~~ka~~l~~~~~----~~~-----~~~~~----~~~~l~--- 83 (159)
T d1gpja2 24 DKTVLVVGA-GEMGKTVAKSLVDRGV---RAVLVANRTYERAVELARDLG----GEA-----VRFDE----LVDHLA--- 83 (159)
T ss_dssp TCEEEEESC-CHHHHHHHHHHHHHCC---SEEEEECSSHHHHHHHHHHHT----CEE-----CCGGG----HHHHHH---
T ss_pred cCeEEEECC-CHHHHHHHHHHHhcCC---cEEEEEcCcHHHHHHHHHhhh----ccc-----ccchh----HHHHhc---
Confidence 368999998 9999999999999994 589999999988887754431 111 11122 222233
Q ss_pred cCCCccEEEeccccC
Q psy11190 81 KDQGLNVLVNNAGIA 95 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~ 95 (248)
..|+||++.+..
T Consensus 84 ---~~Divi~atss~ 95 (159)
T d1gpja2 84 ---RSDVVVSATAAP 95 (159)
T ss_dssp ---TCSEEEECCSSS
T ss_pred ---cCCEEEEecCCC
Confidence 389999998754
|
| >d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: MJ0490, lactate/malate dehydrogenase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=97.35 E-value=0.002 Score=46.01 Aligned_cols=37 Identities=19% Similarity=0.211 Sum_probs=31.5
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCch
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKD 40 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~ 40 (248)
|| +.|+||+|.+|..+|..|+.++ ....+++.+++.+
T Consensus 1 MK-V~IiGA~G~VG~~~a~~l~~~~--l~~el~L~D~~~~ 37 (145)
T d1hyea1 1 MK-VTIIGASGRVGSATALLLAKEP--FMKDLVLIGREHS 37 (145)
T ss_dssp CE-EEEETTTSHHHHHHHHHHHTCT--TCCEEEEEECGGG
T ss_pred CE-EEEECCCChHHHHHHHHHHhCC--cccccccccchhh
Confidence 66 7888999999999999999988 3368999998753
|
| >d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=97.34 E-value=0.0016 Score=46.56 Aligned_cols=120 Identities=17% Similarity=0.238 Sum_probs=68.6
Q ss_pred CceEEEecCCCchhHHHHHHHHhC-CCCCCceEEEeecCchhHHHH-HHHHhhcCCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGL-GNNQPAHIFATCRNKDKAVEL-LALAQQHSNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~-g~~~~~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
|| +.|+|++|.+|.++|..|+.+ + ....+++.+.++ ..+.. .++... ....... -+..... .. .+.
T Consensus 1 MK-V~IiGaaG~VG~~~a~~l~~~~~--~~~el~L~D~~~-~~~g~a~Dl~h~-~~~~~~~-~~~~~~~-~~----~~~- 68 (145)
T d2cmda1 1 MK-VAVLGAAGGIGQALALLLKTQLP--SGSELSLYDIAP-VTPGVAVDLSHI-PTAVKIK-GFSGEDA-TP----ALE- 68 (145)
T ss_dssp CE-EEEETTTSHHHHHHHHHHHHHSC--TTCEEEEECSST-THHHHHHHHHTS-CSSCEEE-EECSSCC-HH----HHT-
T ss_pred CE-EEEEcCCChHHHHHHHHHHhCCC--CCcEEEEecccc-cchhHHHHHHCC-ccccCCc-EEEcCCC-cc----ccC-
Confidence 65 668899999999999988643 4 337899999764 33322 233221 1111111 1222222 11 122
Q ss_pred hhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 79 VVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
+-|++|..||.... + ..+..++ +..| ..+.+...+.+.+.. +++.++++|.+..
T Consensus 69 -----~aDvvvitaG~~~k--~--g~~R~dl---~~~N----~~i~~~v~~~i~~~~----------p~aivivvtNPvD 122 (145)
T d2cmda1 69 -----GADVVLISAGVRRK--P--GMDRSDL---FNVN----AGIVKNLVQQVAKTC----------PKACIGIITNPVN 122 (145)
T ss_dssp -----TCSEEEECCSCCCC--T--TCCGGGG---HHHH----HHHHHHHHHHHHHHC----------TTSEEEECSSSHH
T ss_pred -----CCCEEEECCCccCC--C--CcchhhH---HHHH----HHHHHHHHHHHHhhC----------CCcEEEEccCCch
Confidence 38999999997532 1 2233332 3333 456666666666653 5788898887654
|
| >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=97.30 E-value=0.00014 Score=53.52 Aligned_cols=40 Identities=28% Similarity=0.404 Sum_probs=36.1
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELL 46 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~ 46 (248)
|.++|.|+ |.+|+.+|+.|+++| +.|++++|+.++++++.
T Consensus 3 K~IliiGa-G~~G~~~a~~L~~~g----~~V~v~dr~~~~a~~l~ 42 (182)
T d1e5qa1 3 KSVLMLGS-GFVTRPTLDVLTDSG----IKVTVACRTLESAKKLS 42 (182)
T ss_dssp CEEEEECC-STTHHHHHHHHHTTT----CEEEEEESCHHHHHHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHhCC----CEEEEEECChHHHHHHH
Confidence 67889876 999999999999999 89999999999877764
|
| >d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.30 E-value=0.0038 Score=44.32 Aligned_cols=116 Identities=19% Similarity=0.171 Sum_probs=70.0
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH-HHHHhh---cC-CceeEEeeccCCchhhhhHHHH
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL-LALAQQ---HS-NLHVIELDVTDFSKQQDVLFKD 75 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~-~~~~~~---~~-~~~~~~~D~~~~~~~v~~~~~~ 75 (248)
||.++| |+ |.+|..+|..|+.+| .-..+++.+.+.+.++.. .++... .+ ...+... .|.+.
T Consensus 1 MKI~II-Ga-G~VG~~~a~~l~~~~--~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~--~d~~~-------- 66 (142)
T d1ojua1 1 MKLGFV-GA-GRVGSTSAFTCLLNL--DVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYSL-------- 66 (142)
T ss_dssp CEEEEE-CC-SHHHHHHHHHHHHHS--CCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SCGGG--------
T ss_pred CEEEEE-Cc-CHHHHHHHHHHHhcC--cCceEEEEecccchhhHHHHHHhhhccccCCCCccccC--CCHHH--------
Confidence 775555 75 999999999999888 346799999998775543 222211 11 2222211 11122
Q ss_pred hhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeec
Q psy11190 76 ISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSS 155 (248)
Q Consensus 76 i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss 155 (248)
+. .-|++|..||.... ...+..+. +.....+.+...+.+.+.. +++.++++|.
T Consensus 67 ~~------~adiVvitag~~~~----~g~~r~~l-------~~~n~~i~~~i~~~i~~~~----------p~aivivvtN 119 (142)
T d1ojua1 67 LK------GSEIIVVTAGLARK----PGMTRLDL-------AHKNAGIIKDIAKKIVENA----------PESKILVVTN 119 (142)
T ss_dssp GT------TCSEEEECCCCCCC----SSCCHHHH-------HHHHHHHHHHHHHHHHTTS----------TTCEEEECSS
T ss_pred hc------cccEEEEeccccCC----CCCchHHH-------HHHhhHHHHHHHHHHHhhC----------CCcEEEEecC
Confidence 11 28999999986532 11232222 2245566777777777653 5788888887
Q ss_pred CC
Q psy11190 156 IM 157 (248)
Q Consensus 156 ~~ 157 (248)
+.
T Consensus 120 Pv 121 (142)
T d1ojua1 120 PM 121 (142)
T ss_dssp SH
T ss_pred Ch
Confidence 54
|
| >d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=97.29 E-value=0.003 Score=45.45 Aligned_cols=123 Identities=9% Similarity=0.053 Sum_probs=65.4
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCC---c--eEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhh
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQP---A--HIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDIS 77 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~---~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~ 77 (248)
.+.|+||+|.+|..++..|+..+.-.. . +++...++.+.++.................-.++...
T Consensus 6 KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 75 (154)
T d1y7ta1 6 RVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPK---------- 75 (154)
T ss_dssp EEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHH----------
T ss_pred EEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccCCchh----------
Confidence 689999999999999999997662100 1 2222334444444432222222211111122222111
Q ss_pred hhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCC
Q psy11190 78 DVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIM 157 (248)
Q Consensus 78 ~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~ 157 (248)
+.+. +.|++|..+|.... ...+.+++.. ....+.+.+.+.+.+..+ +++.++.+|.+.
T Consensus 76 ~~~~--~advViitaG~~~~----pg~~r~dl~~-------~N~~i~~~~~~~i~k~a~---------~~~~vivvsNPv 133 (154)
T d1y7ta1 76 VAFK--DADYALLVGAAPRK----AGMERRDLLQ-------VNGKIFTEQGRALAEVAK---------KDVKVLVVGNPA 133 (154)
T ss_dssp HHTT--TCSEEEECCCCCCC----TTCCHHHHHH-------HHHHHHHHHHHHHHHHSC---------TTCEEEECSSSH
T ss_pred hhcc--cccEEEeecCcCCC----CCCcHHHHHH-------HHHHHHHHHHHHHHHhCC---------CCcEEEEecCcH
Confidence 1112 38999999997532 2334444322 455677777777776421 345666776543
|
| >d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=97.28 E-value=0.00027 Score=52.48 Aligned_cols=76 Identities=21% Similarity=0.251 Sum_probs=49.4
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
.++||+||+||.|...+...-..| ++|+.+++++++.+.+.++. .. +++ |-++. .... +.. .+
T Consensus 33 ~~VLI~gaaGGVG~~aiQlak~~G----a~Viat~~s~~k~~~~~~lG---a~-~vi--~~~~~---~~~~---~~~-~~ 95 (176)
T d1xa0a2 33 GPVLVTGATGGVGSLAVSMLAKRG----YTVEASTGKAAEHDYLRVLG---AK-EVL--AREDV---MAER---IRP-LD 95 (176)
T ss_dssp CCEEESSTTSHHHHHHHHHHHHTT----CCEEEEESCTTCHHHHHHTT---CS-EEE--ECC----------------CC
T ss_pred CEEEEEeccchHHHHHHHHHHHcC----CceEEecCchHHHHHHHhcc---cc-eee--ecchh---HHHH---HHH-hh
Confidence 369999999999999888877888 99999999998876654432 12 222 32221 1111 222 22
Q ss_pred CCCccEEEecccc
Q psy11190 82 DQGLNVLVNNAGI 94 (248)
Q Consensus 82 ~~~iD~lv~~ag~ 94 (248)
..++|++|.+.|.
T Consensus 96 ~~gvD~vid~vgg 108 (176)
T d1xa0a2 96 KQRWAAAVDPVGG 108 (176)
T ss_dssp SCCEEEEEECSTT
T ss_pred ccCcCEEEEcCCc
Confidence 2369999999874
|
| >d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=97.25 E-value=0.00032 Score=44.55 Aligned_cols=43 Identities=26% Similarity=0.404 Sum_probs=36.7
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLAL 48 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~ 48 (248)
.+++|+||+||.|...+..+...| ++|+.+.+++++.+.+.++
T Consensus 33 ~~vlI~gasGgVG~~aiQlak~~G----~~Vi~~t~s~~k~~~~~~l 75 (77)
T d1o8ca2 33 GEIVVTGASGGVGSTAVALLHKLG----YQVVAVSGRESTHEYLKSL 75 (77)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTT----CCEEEEESCGGGHHHHHHH
T ss_pred CcEEEEeCCCcHHHHHHHHHHHcC----CeEEEEECCHHHHHHHHHC
Confidence 369999999999999998888888 8999999998887766543
|
| >d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=97.24 E-value=0.00045 Score=49.39 Aligned_cols=115 Identities=19% Similarity=0.132 Sum_probs=67.8
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH-HHHHhh----cCCceeE-EeeccCCchhhhhHHH
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL-LALAQQ----HSNLHVI-ELDVTDFSKQQDVLFK 74 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~-~~~~~~----~~~~~~~-~~D~~~~~~~v~~~~~ 74 (248)
+|.+.|.|+ |.+|..+|..|+.++. ..+++++.+++.++.. .++... .....+. ..|..+.
T Consensus 1 r~KI~IIGa-G~VG~~~A~~l~~~~l---~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~~~~--------- 67 (142)
T d1uxja1 1 RKKISIIGA-GFVGSTTAHWLAAKEL---GDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNYADT--------- 67 (142)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTC---SEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGGGG---------
T ss_pred CCeEEEECC-CHHHHHHHHHHHhCCc---ceEEEEeeccccchhHHHHhhccccccCCCCEEEecCcHHHh---------
Confidence 356777786 9999999999999885 6899999988765543 222111 1122222 1222221
Q ss_pred HhhhhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEee
Q psy11190 75 DISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVS 154 (248)
Q Consensus 75 ~i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vs 154 (248)
. .-|++|.+||..... ..+.. +.+. ....+.+...+.+.+.. +++.++++|
T Consensus 68 --~------~advvvitag~~~~~----~~~r~---dl~~----~N~~i~~~i~~~i~k~~----------p~aivivvt 118 (142)
T d1uxja1 68 --A------NSDVIVVTSGAPRKP----GMSRE---DLIK----VNADITRACISQAAPLS----------PNAVIIMVN 118 (142)
T ss_dssp --T------TCSEEEECCSCC----------------CHH----HHHHHHHHHHHHHGGGC----------TTCEEEECS
T ss_pred --c------CCCEEEEeeeccCCc----Ccchh---HHHh----HHHHHHHHHHHHHhccC----------CCceEEEeC
Confidence 1 389999999975421 11222 2222 23456777777777653 678888877
Q ss_pred cCC
Q psy11190 155 SIM 157 (248)
Q Consensus 155 s~~ 157 (248)
.+.
T Consensus 119 NPv 121 (142)
T d1uxja1 119 NPL 121 (142)
T ss_dssp SSH
T ss_pred Cch
Confidence 654
|
| >d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.22 E-value=0.0043 Score=44.93 Aligned_cols=116 Identities=15% Similarity=0.185 Sum_probs=72.0
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH-HHHHhhc---CCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL-LALAQQH---SNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~-~~~~~~~---~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
.+.|.|+ |.+|..+|..|+.+| ....+++.+++.+.++.. .++.... +....+.. .|.+. +.
T Consensus 21 KI~IIGa-G~VG~~~A~~l~~~~--l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~--~d~~~--------~~- 86 (159)
T d2ldxa1 21 KITVVGV-GDVGMACAISILLKG--LADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFG--KDYNV--------SA- 86 (159)
T ss_dssp EEEEECC-SHHHHHHHHHHHTTT--SCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEE--SSGGG--------GT-
T ss_pred eEEEECC-CHHHHHHHHHHHhcC--CCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEec--cchhh--------hc-
Confidence 3677785 999999999999998 346899999998776544 3333211 11111111 22222 11
Q ss_pred hhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 79 VVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
..|++|..||..... ..+.+++ +.....+.+.+.+.+.+.. +++.++++|.+..
T Consensus 87 -----~adivvitag~~~~~----~~~R~dl-------l~~N~~i~~~i~~~i~~~~----------p~~ivivvtNPvD 140 (159)
T d2ldxa1 87 -----NSKLVIITAGARMVS----GQTRLDL-------LQRNVAIMKAIVPGVIQNS----------PDCKIIVVTNPVD 140 (159)
T ss_dssp -----TEEEEEECCSCCCCT----TTCSSCT-------THHHHHHHHHHTTTHHHHS----------TTCEEEECSSSHH
T ss_pred -----cccEEEEecccccCC----CCCHHHH-------HHHHHHHHHHHHHHHhccC----------CCeEEEEeCCcHH
Confidence 389999999875431 1222221 3345566777788777654 6888898887553
|
| >d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Clostridium thermocellum [TaxId: 1515]
Probab=97.21 E-value=0.00066 Score=48.47 Aligned_cols=115 Identities=17% Similarity=0.154 Sum_probs=65.2
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH-HHHHhhcC---CceeEEeeccCCchhhhhHHHHhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL-LALAQQHS---NLHVIELDVTDFSKQQDVLFKDIS 77 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~-~~~~~~~~---~~~~~~~D~~~~~~~v~~~~~~i~ 77 (248)
+.+.|.|+ |.+|..++..|+.++ ....+++.+++++.++.. .++..... ....... +.++ +.
T Consensus 2 ~KI~IIGa-G~VG~~~a~~l~~~~--l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~---~~~~--------~~ 67 (142)
T d1y6ja1 2 SKVAIIGA-GFVGASAAFTMALRQ--TANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAG---DYSD--------VK 67 (142)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTT--CSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----CGGG--------GT
T ss_pred CeEEEECC-CHHHHHHHHHHHhcC--CCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeC---cHHH--------hC
Confidence 45667786 999999999999998 346899999998765443 33332111 1111111 1111 11
Q ss_pred hhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCC
Q psy11190 78 DVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIM 157 (248)
Q Consensus 78 ~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~ 157 (248)
+.|++|..||.... + ..+..+ .+ .....+.+.+.+.+.+.. +++.++++|.+.
T Consensus 68 ------~adivvitag~~~~--~--~~~r~~---l~----~~N~~i~~~i~~~i~~~~----------p~ai~ivvtNPv 120 (142)
T d1y6ja1 68 ------DCDVIVVTAGANRK--P--GETRLD---LA----KKNVMIAKEVTQNIMKYY----------NHGVILVVSNPV 120 (142)
T ss_dssp ------TCSEEEECCCC----------CHHH---HH----HHHHHHHHHHHHHHHHHC----------CSCEEEECSSSH
T ss_pred ------CCceEEEecccccC--c--CcchhH---Hh----hHHHHHHHHHHHHhhccC----------CCceEEEecChH
Confidence 38999999996532 1 122222 22 244456677777777653 678888888754
|
| >d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=97.17 E-value=0.00096 Score=48.81 Aligned_cols=79 Identities=11% Similarity=0.249 Sum_probs=54.0
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
.+++|+|++|++|..++..+...|. ..|+++++++++.+.+.++. .. . ..|.++.+. .+.. .+..+
T Consensus 29 ~~vlV~G~~G~vG~~~~~~~~~~g~---~~V~~~~~~~~~~~~~~~~G---a~-~--~i~~~~~~~-~~~~----~~~~~ 94 (170)
T d1jvba2 29 KTLLVVGAGGGLGTMAVQIAKAVSG---ATIIGVDVREEAVEAAKRAG---AD-Y--VINASMQDP-LAEI----RRITE 94 (170)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTC---CEEEEEESSHHHHHHHHHHT---CS-E--EEETTTSCH-HHHH----HHHTT
T ss_pred CEEEEEeccccceeeeeeccccccc---ccccccccchhhHHHHHHcC---Cc-e--eeccCCcCH-HHHH----HHHhh
Confidence 3799999999999999998888884 68999999988766554432 11 2 234444433 3333 33322
Q ss_pred CCCccEEEecccc
Q psy11190 82 DQGLNVLVNNAGI 94 (248)
Q Consensus 82 ~~~iD~lv~~ag~ 94 (248)
..++|++|.++|.
T Consensus 95 ~~~~d~vid~~g~ 107 (170)
T d1jvba2 95 SKGVDAVIDLNNS 107 (170)
T ss_dssp TSCEEEEEESCCC
T ss_pred cccchhhhccccc
Confidence 2359999999874
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.16 E-value=0.001 Score=48.76 Aligned_cols=80 Identities=13% Similarity=0.234 Sum_probs=54.7
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
.+++|.|+ |++|...+..+...|+ .+|+++++++++++...++. .. +++ + .+.++ .....+.+....+
T Consensus 28 d~VlI~G~-G~iG~~~~~~a~~~G~---~~Vi~~d~~~~rl~~a~~~G---a~-~~~--~-~~~~~-~~~~~~~~~~~~g 95 (171)
T d1pl8a2 28 HKVLVCGA-GPIGMVTLLVAKAMGA---AQVVVTDLSATRLSKAKEIG---AD-LVL--Q-ISKES-PQEIARKVEGQLG 95 (171)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTC---SEEEEEESCHHHHHHHHHTT---CS-EEE--E-CSSCC-HHHHHHHHHHHHT
T ss_pred CEEEEECC-CccHHHHHHHHHHcCC---ceEEeccCCHHHHHHHHHhC---Cc-ccc--c-ccccc-cccccccccccCC
Confidence 36889876 9999999999999994 48999999988877554332 11 222 2 22233 4445555665555
Q ss_pred CCCccEEEecccc
Q psy11190 82 DQGLNVLVNNAGI 94 (248)
Q Consensus 82 ~~~iD~lv~~ag~ 94 (248)
. ++|++|.+.|.
T Consensus 96 ~-g~Dvvid~~G~ 107 (171)
T d1pl8a2 96 C-KPEVTIECTGA 107 (171)
T ss_dssp S-CCSEEEECSCC
T ss_pred C-CceEEEeccCC
Confidence 3 69999999884
|
| >d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]
Probab=97.12 E-value=0.0074 Score=43.64 Aligned_cols=117 Identities=18% Similarity=0.194 Sum_probs=71.8
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH-HHHHhhc--CCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL-LALAQQH--SNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~-~~~~~~~--~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
.+.|.|+ |.+|..+|..|+.+| ....+++.+.+++.++.. .++.... .+...+ .-..+.++ +.
T Consensus 22 KV~IIGa-G~VG~~~A~~l~~~~--l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~-~~~~d~~~--------~~-- 87 (160)
T d1i0za1 22 KITVVGV-GQVGMACAISILGKS--LADELALVDVLEDKLKGEMMDLQHGSLFLQTPKI-VADKDYSV--------TA-- 87 (160)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTT--CCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEE-EECSSGGG--------GT--
T ss_pred eEEEECC-CHHHHHHHHHHHhcC--CCcEEEEEEeccchhHHHHHHHhccccccCCCeE-Eeccchhh--------cc--
Confidence 5677786 999999999999999 346899999998776544 2332211 111111 11122222 11
Q ss_pred hcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCCC
Q psy11190 80 VKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~~ 158 (248)
.-|++|..||.... ...+..+ . +.....+.+.+.+.+.+.. +++.++++|.+..
T Consensus 88 ----~adiVVitAg~~~~----~g~tR~~---l----~~~N~~i~~~i~~~i~~~~----------p~aiiivvtNPvD 141 (160)
T d1i0za1 88 ----NSKIVVVTAGVRQQ----EGESRLN---L----VQRNVNVFKFIIPQIVKYS----------PDCIIIVVSNPVD 141 (160)
T ss_dssp ----TCSEEEECCSCCCC----TTCCGGG---G----HHHHHHHHHHHHHHHHHHC----------TTCEEEECSSSHH
T ss_pred ----cccEEEEecCCccc----cCcchHH---H----HHHHHHHHHHHHHHHHhcC----------CCcEEEEeCCchH
Confidence 38999999997532 1123222 2 2235557777777777753 6788899887553
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=97.07 E-value=0.001 Score=48.89 Aligned_cols=42 Identities=21% Similarity=0.391 Sum_probs=36.0
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA 47 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~ 47 (248)
++++|+||+|++|...+..+...| ++|+.+++++++.+.+.+
T Consensus 29 ~~VlI~ga~G~vG~~aiqlak~~G----~~vi~~~~~~~~~~~~~~ 70 (171)
T d1iz0a2 29 EKVLVQAAAGALGTAAVQVARAMG----LRVLAAASRPEKLALPLA 70 (171)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHTT----CEEEEEESSGGGSHHHHH
T ss_pred CEEEEEeccccchhhhhhhhcccc----cccccccccccccccccc
Confidence 479999999999999988888888 899999998887665544
|
| >d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]
Probab=97.04 E-value=0.01 Score=41.97 Aligned_cols=115 Identities=15% Similarity=0.141 Sum_probs=70.1
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH-HHHHhh---cCCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL-LALAQQ---HSNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~-~~~~~~---~~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
.+.|.|+ |.+|.++|..|+.+| ....+++.+.+++.++.. .++... .+...+... .+.+. +.
T Consensus 3 Ki~IIGa-G~VG~~~a~~l~~~~--l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~--~~~~~--------~~- 68 (143)
T d1llda1 3 KLAVIGA-GAVGSTLAFAAAQRG--IAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGS--DDPEI--------CR- 68 (143)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTT--CCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEE--SCGGG--------GT-
T ss_pred EEEEECC-CHHHHHHHHHHHhcC--CCcEEEEEEeccccchhHHHHHHhccccCCCceeecC--CCHHH--------hh-
Confidence 4667786 999999999999999 446899999998765543 223221 112222111 11111 11
Q ss_pred hhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecCC
Q psy11190 79 VVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSIM 157 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~~ 157 (248)
.-|++|..||.... ...+..+ .+ .....+.+...+.+.+.. +++.++++|.+.
T Consensus 69 -----daDvVVitaG~~~~----~g~~R~d---l~----~~N~~i~~~i~~~i~~~~----------p~ai~ivvtNPv 121 (143)
T d1llda1 69 -----DADMVVITAGPRQK----PGQSRLE---LV----GATVNILKAIMPNLVKVA----------PNAIYMLITNPV 121 (143)
T ss_dssp -----TCSEEEECCCCCCC----TTCCHHH---HH----HHHHHHHHHHHHHHHHHC----------TTSEEEECCSSH
T ss_pred -----CCcEEEEecccccC----CCCchhh---hh----hhhHHHHHHHHHHHHhhC----------CCeEEEEeCCch
Confidence 38999999997532 1223333 22 244566677777776653 578888888654
|
| >d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=97.01 E-value=0.00066 Score=49.87 Aligned_cols=43 Identities=30% Similarity=0.407 Sum_probs=37.3
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHH
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALA 49 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~ 49 (248)
++||+||+||.|...+...-..| ++|+.++++.++.+.+.++.
T Consensus 26 ~VLV~gaaGgVG~~avQlAk~~G----a~Viat~~s~~k~~~~~~lG 68 (167)
T d1tt7a2 26 SVLVTGATGGVGGIAVSMLNKRG----YDVVASTGNREAADYLKQLG 68 (167)
T ss_dssp CEEEESTTSHHHHHHHHHHHHHT----CCEEEEESSSSTHHHHHHHT
T ss_pred EEEEeCCcchHHHHHHHHHHHcC----CceEEEecCHHHHHHHHhhc
Confidence 69999999999999888877778 89999999998877775553
|
| >d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.97 E-value=0.0011 Score=49.43 Aligned_cols=78 Identities=14% Similarity=0.239 Sum_probs=48.6
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
+++||+||+||+|...++-+-..|+ ..|+.+++++++..++.... +.- ...|..+.+. .+ .+++..+
T Consensus 32 etVLI~gaaGgVG~~aiQlak~~Ga---~~vi~~~~~~e~~~~l~~~~---gad--~vi~~~~~~~--~~---~~~~~~~ 98 (187)
T d1vj1a2 32 QTMVVSGAAGACGSLAGQIGHLLGC---SRVVGICGTQEKCLFLTSEL---GFD--AAVNYKTGNV--AE---QLREACP 98 (187)
T ss_dssp CEEEESSTTSTTGGGHHHHHHHTTC---SEEEEEESSHHHHHHHHHHS---CCS--EEEETTSSCH--HH---HHHHHCT
T ss_pred CEEEEECCCchhhHHHHHHHHHcCC---cceecccchHHHHhhhhhcc---cce--EEeeccchhH--HH---HHHHHhc
Confidence 4799999999999998888777883 34555666655544443222 111 2345554443 22 2333333
Q ss_pred CCCccEEEeccc
Q psy11190 82 DQGLNVLVNNAG 93 (248)
Q Consensus 82 ~~~iD~lv~~ag 93 (248)
+ ++|+++.+.|
T Consensus 99 ~-GvDvv~D~vG 109 (187)
T d1vj1a2 99 G-GVDVYFDNVG 109 (187)
T ss_dssp T-CEEEEEESSC
T ss_pred c-CceEEEecCC
Confidence 2 5999999887
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=96.95 E-value=0.0012 Score=48.53 Aligned_cols=79 Identities=22% Similarity=0.308 Sum_probs=52.5
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
.+++|.|+ +|+|...+..+...|+ .+|+++++++++.+...+.. -.. ..|..+.++.+....+... +
T Consensus 30 dtVlV~Ga-GG~G~~~~~~~~~~g~---~~Vi~~~~~~~k~~~a~~~G----a~~--~i~~~~~~~~~~~~~~~~~---~ 96 (176)
T d2jhfa2 30 STCAVFGL-GGVGLSVIMGCKAAGA---ARIIGVDINKDKFAKAKEVG----ATE--CVNPQDYKKPIQEVLTEMS---N 96 (176)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTC---SEEEEECSCGGGHHHHHHTT----CSE--EECGGGCSSCHHHHHHHHT---T
T ss_pred CEEEEECC-CCcHHHHHHHHHHcCC---ceEEeecCcHHHHHHHHHhC----Cee--EEecCCchhHHHHHHHHHh---c
Confidence 37999999 6899999999999985 79999999998877554432 111 1233332221333333332 2
Q ss_pred CCCccEEEecccc
Q psy11190 82 DQGLNVLVNNAGI 94 (248)
Q Consensus 82 ~~~iD~lv~~ag~ 94 (248)
+++|++|-+.|.
T Consensus 97 -~G~D~vid~~G~ 108 (176)
T d2jhfa2 97 -GGVDFSFEVIGR 108 (176)
T ss_dssp -SCBSEEEECSCC
T ss_pred -CCCCEEEecCCc
Confidence 369999999885
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=96.92 E-value=0.0013 Score=48.49 Aligned_cols=78 Identities=14% Similarity=0.118 Sum_probs=52.7
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
.+++|.|+ |++|...+..+...|+ .+|+++++++++.+...++.. - ..+|..+.+. .+ .+.+..+
T Consensus 29 ~~VlI~Ga-G~vGl~~~q~ak~~Ga---~~Vi~~d~~~~r~~~a~~lGa----~--~~i~~~~~~~-~~----~v~~~t~ 93 (174)
T d1jqba2 29 SSVVVIGI-GAVGLMGIAGAKLRGA---GRIIGVGSRPICVEAAKFYGA----T--DILNYKNGHI-ED----QVMKLTN 93 (174)
T ss_dssp CCEEEECC-SHHHHHHHHHHHTTTC---SCEEEECCCHHHHHHHHHHTC----S--EEECGGGSCH-HH----HHHHHTT
T ss_pred CEEEEEcC-Ccchhhhhhhhhcccc---cccccccchhhhHHHHHhhCc----c--ccccccchhH-HH----HHHHHhh
Confidence 36889876 8999999999988884 489999999887665544321 1 2245554433 33 3444433
Q ss_pred CCCccEEEecccc
Q psy11190 82 DQGLNVLVNNAGI 94 (248)
Q Consensus 82 ~~~iD~lv~~ag~ 94 (248)
..++|++|.++|.
T Consensus 94 g~G~D~vid~~g~ 106 (174)
T d1jqba2 94 GKGVDRVIMAGGG 106 (174)
T ss_dssp TSCEEEEEECSSC
T ss_pred ccCcceEEEccCC
Confidence 2359999999984
|
| >d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=96.92 E-value=0.0017 Score=48.82 Aligned_cols=79 Identities=15% Similarity=0.224 Sum_probs=50.0
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
.+++|.|+ |++|...+..+...|+ .+|+++++++++++...+.. ... ..+-.+ ++ . .+++.+..+
T Consensus 27 ~tVlV~Ga-G~vGl~a~~~ak~~ga---~~Vi~~d~~~~rl~~a~~~G-----a~~-~~~~~~-~~-~---~~~i~~~t~ 91 (195)
T d1kola2 27 STVYVAGA-GPVGLAAAASARLLGA---AVVIVGDLNPARLAHAKAQG-----FEI-ADLSLD-TP-L---HEQIAALLG 91 (195)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTC---SEEEEEESCHHHHHHHHHTT-----CEE-EETTSS-SC-H---HHHHHHHHS
T ss_pred CEEEEECc-CHHHHHHHHHHHhhcc---cceeeecccchhhHhhhhcc-----ccE-EEeCCC-cC-H---HHHHHHHhC
Confidence 47899986 8999888887777784 68999999988766543331 111 122222 22 2 223333333
Q ss_pred CCCccEEEeccccC
Q psy11190 82 DQGLNVLVNNAGIA 95 (248)
Q Consensus 82 ~~~iD~lv~~ag~~ 95 (248)
..++|++|.+.|..
T Consensus 92 g~g~D~vid~vG~~ 105 (195)
T d1kola2 92 EPEVDCAVDAVGFE 105 (195)
T ss_dssp SSCEEEEEECCCTT
T ss_pred CCCcEEEEECcccc
Confidence 23599999999854
|
| >d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=96.92 E-value=0.0023 Score=47.22 Aligned_cols=80 Identities=19% Similarity=0.247 Sum_probs=53.2
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
.+++|+|+ ||+|...+..+...|+ .+|+.+++++++++...++.. . ++ .|..+.+...+.+. +. ..+
T Consensus 31 ~tVlI~G~-GgvGl~ai~~ak~~G~---~~Vi~vd~~~~kl~~Ak~~GA---~-~~--in~~~~~~~~~~~~-~~--~~g 97 (176)
T d1d1ta2 31 STCVVFGL-GGVGLSVIMGCKSAGA---SRIIGIDLNKDKFEKAMAVGA---T-EC--ISPKDSTKPISEVL-SE--MTG 97 (176)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTC---SEEEEECSCGGGHHHHHHHTC---S-EE--ECGGGCSSCHHHHH-HH--HHT
T ss_pred CEEEEECC-CchhHHHHHHHHHcCC---ceEEEecCcHHHHHHHHhcCC---c-EE--ECccccchHHHHHH-HH--hcc
Confidence 37899976 9999999999999995 799999999999886555532 1 12 24443332122221 11 122
Q ss_pred CCCccEEEeccccC
Q psy11190 82 DQGLNVLVNNAGIA 95 (248)
Q Consensus 82 ~~~iD~lv~~ag~~ 95 (248)
.++|++|.+.|..
T Consensus 98 -~G~d~vi~~~g~~ 110 (176)
T d1d1ta2 98 -NNVGYTFEVIGHL 110 (176)
T ss_dssp -SCCCEEEECSCCH
T ss_pred -ccceEEEEeCCch
Confidence 2599999998753
|
| >d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=96.91 E-value=0.0013 Score=48.74 Aligned_cols=43 Identities=26% Similarity=0.404 Sum_probs=36.8
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLAL 48 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~ 48 (248)
.++||+||+||+|...+...-..| ++|+.+++++++.+.+.++
T Consensus 33 ~~vlV~gasGGVG~~aiQlAk~~G----a~Via~~~~~~k~~~~~~l 75 (177)
T d1o89a2 33 GEIVVTGASGGVGSTAVALLHKLG----YQVVAVSGRESTHEYLKSL 75 (177)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTT----CCEEEEESCGGGHHHHHHH
T ss_pred CcEEEEEccccchHHHHHHHHHcC----CCeEEEecchhHHHHHHhh
Confidence 379999999999999888888888 8999999999887665544
|
| >d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Toxoplasma gondii [TaxId: 5811]
Probab=96.86 E-value=0.0038 Score=44.96 Aligned_cols=121 Identities=12% Similarity=0.084 Sum_probs=70.0
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH-HHHHhh---cCCceeEEeeccCCchhhhhHHHHhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL-LALAQQ---HSNLHVIELDVTDFSKQQDVLFKDIS 77 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~-~~~~~~---~~~~~~~~~D~~~~~~~v~~~~~~i~ 77 (248)
+.+.|.|+ |.+|..+|..|+..+. ..+++.+.+.+.++.. ..+... .+.-..+.. -++.++ .++
T Consensus 8 ~KI~IIGa-G~VG~~lA~~l~~~~~---~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~-~~~~~~-------~~~ 75 (154)
T d1pzga1 8 KKVAMIGS-GMIGGTMGYLCALREL---ADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA-EYSYEA-------ALT 75 (154)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTC---CEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE-ECSHHH-------HHT
T ss_pred CcEEEECC-CHHHHHHHHHHHhCCC---ceEEEEEeccccchhHHHHHhhhccccCCeeEEec-cCchhh-------hhc
Confidence 45777787 9999999999998885 6899999988765544 222211 111111111 111111 111
Q ss_pred hhhcCCCccEEEeccccCCccccCC-CCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecC
Q psy11190 78 DVVKDQGLNVLVNNAGIAAKFTRLG-LLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSI 156 (248)
Q Consensus 78 ~~~~~~~iD~lv~~ag~~~~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~ 156 (248)
.-|++|..+|......... ..+..+ . +.....+++...+.+.+.. +++.++++|.+
T Consensus 76 ------~adiVvitag~~~~~g~~~~~~tR~~---l----~~~n~~iv~~i~~~i~~~~----------p~aiviivsNP 132 (154)
T d1pzga1 76 ------GADCVIVTAGLTKVPGKPDSEWSRND---L----LPFNSKIIREIGQNIKKYC----------PKTFIIVVTNP 132 (154)
T ss_dssp ------TCSEEEECCSCSSCTTCCGGGCCGGG---G----HHHHHHHHHHHHHHHHHHC----------TTCEEEECCSS
T ss_pred ------CCCeEEEecccccCCCCCCcccchhh---h----hhhhHHHHHHHHHHHHhcC----------CCcEEEEeCCc
Confidence 3899999999764322111 112222 1 2234556677777776653 57888888875
Q ss_pred C
Q psy11190 157 M 157 (248)
Q Consensus 157 ~ 157 (248)
.
T Consensus 133 v 133 (154)
T d1pzga1 133 L 133 (154)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=96.82 E-value=0.0077 Score=43.07 Aligned_cols=119 Identities=17% Similarity=0.162 Sum_probs=70.6
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH-HHHHhh----cCCceeEEeeccCCchhhhhHHHHhh
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL-LALAQQ----HSNLHVIELDVTDFSKQQDVLFKDIS 77 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~-~~~~~~----~~~~~~~~~D~~~~~~~v~~~~~~i~ 77 (248)
.+.|.|+ |.+|..++..|+.++. ..+++.+++.+.++.. .++... ..+..+...+ +.+. +.
T Consensus 5 KI~IIGa-G~VG~~~a~~l~~~~l---~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~~~~--------~~ 70 (150)
T d1t2da1 5 KIVLVGS-GMIGGVMATLIVQKNL---GDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN--TYDD--------LA 70 (150)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTC---CEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC--CGGG--------GT
T ss_pred eEEEECC-CHHHHHHHHHHHhCCC---CeEEEEeccCCcceeeecchhhhccccCCCcEEEecc--cccc--------cC
Confidence 4667785 9999999999998885 6899999988775544 222211 1222333221 1121 11
Q ss_pred hhhcCCCccEEEeccccCCccccC-CCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecC
Q psy11190 78 DVVKDQGLNVLVNNAGIAAKFTRL-GLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSI 156 (248)
Q Consensus 78 ~~~~~~~iD~lv~~ag~~~~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~ 156 (248)
+.|++|.++|........ ...+.. ..+. ....+.+.+.+.+.+.. +++.++++|.+
T Consensus 71 ------~advvvitag~~~~~g~~~~~~~R~---~l~~----~N~~iv~~i~~~i~~~~----------p~aivivvtNP 127 (150)
T d1t2da1 71 ------GADVVIVTAGFTKAPGKSDKEWNRD---DLLP----LNNKIMIEIGGHIKKNC----------PNAFIIVVTNP 127 (150)
T ss_dssp ------TCSEEEECCSCSSCTTCCSTTCCGG---GGHH----HHHHHHHHHHHHHHHHC----------TTSEEEECSSS
T ss_pred ------CCcEEEEecccccCCCCCccccchh---HHHH----HHHHHHHHHHHHHHhcC----------CCeEEEEecCc
Confidence 389999999976432211 111121 2222 33456677777777653 57888888875
Q ss_pred CC
Q psy11190 157 MG 158 (248)
Q Consensus 157 ~~ 158 (248)
..
T Consensus 128 vD 129 (150)
T d1t2da1 128 VD 129 (150)
T ss_dssp HH
T ss_pred hH
Confidence 53
|
| >d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Probab=96.75 E-value=0.0017 Score=47.74 Aligned_cols=79 Identities=22% Similarity=0.300 Sum_probs=51.9
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
.+++|.|+ ||+|...+..+...|+ .+|+++++++++++...++- --.+ .|.++.+..+....... .+
T Consensus 29 ~~VlV~Ga-GgvGl~a~~~ak~~G~---~~Vi~~d~~~~kl~~a~~lG----a~~~--i~~~~~d~~~~~~~~~~---~~ 95 (174)
T d1p0fa2 29 STCAVFGL-GGVGFSAIVGCKAAGA---SRIIGVGTHKDKFPKAIELG----ATEC--LNPKDYDKPIYEVICEK---TN 95 (174)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTC---SEEEEECSCGGGHHHHHHTT----CSEE--ECGGGCSSCHHHHHHHH---TT
T ss_pred CEEEEECC-CchhHHHHHHHHHcCC---ceeeccCChHHHHHHHHHcC----CcEE--EcCCCchhHHHHHHHHh---cC
Confidence 37899986 8999999999998895 68999999998877654432 1122 34443332122222222 22
Q ss_pred CCCccEEEecccc
Q psy11190 82 DQGLNVLVNNAGI 94 (248)
Q Consensus 82 ~~~iD~lv~~ag~ 94 (248)
+++|++|-++|.
T Consensus 96 -~G~d~vid~~g~ 107 (174)
T d1p0fa2 96 -GGVDYAVECAGR 107 (174)
T ss_dssp -SCBSEEEECSCC
T ss_pred -CCCcEEEEcCCC
Confidence 359999998874
|
| >d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn bsu222 species: Bacillus subtilis [TaxId: 1423]
Probab=96.75 E-value=0.0013 Score=46.05 Aligned_cols=73 Identities=19% Similarity=0.283 Sum_probs=52.5
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|.++|.|+ |-+|+.+++.|.++| ..|++++.+++..+++. .....++..|.++++. ...+ .+ .
T Consensus 1 k~~iIiG~-G~~G~~la~~L~~~g----~~vvvid~d~~~~~~~~-----~~~~~~~~gd~~~~~~-l~~a--~i----~ 63 (134)
T d2hmva1 1 KQFAVIGL-GRFGGSIVKELHRMG----HEVLAVDINEEKVNAYA-----SYATHAVIANATEENE-LLSL--GI----R 63 (134)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTT----CCCEEEESCHHHHHHTT-----TTCSEEEECCTTCTTH-HHHH--TG----G
T ss_pred CEEEEECC-CHHHHHHHHHHHHCC----CeEEEecCcHHHHHHHH-----HhCCcceeeecccchh-hhcc--CC----c
Confidence 56777766 789999999999999 99999999988766542 1234567789988766 3332 11 1
Q ss_pred CCCccEEEeccc
Q psy11190 82 DQGLNVLVNNAG 93 (248)
Q Consensus 82 ~~~iD~lv~~ag 93 (248)
..|.+|...+
T Consensus 64 --~a~~vi~~~~ 73 (134)
T d2hmva1 64 --NFEYVIVAIG 73 (134)
T ss_dssp --GCSEEEECCC
T ss_pred --cccEEEEEcC
Confidence 3777777664
|
| >d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase-like protein HI0607 species: Haemophilus influenzae [TaxId: 727]
Probab=96.74 E-value=0.0025 Score=46.55 Aligned_cols=44 Identities=18% Similarity=0.286 Sum_probs=36.9
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALA 49 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~ 49 (248)
|.++|.|+ ||.+++++..|.+.|. .+|.++.|+.++.+.+.+..
T Consensus 18 ~~vlIlGa-GGaarai~~aL~~~g~---~~I~I~nR~~~ka~~L~~~~ 61 (167)
T d1npya1 18 AKVIVHGS-GGMAKAVVAAFKNSGF---EKLKIYARNVKTGQYLAALY 61 (167)
T ss_dssp SCEEEECS-STTHHHHHHHHHHTTC---CCEEEECSCHHHHHHHHHHH
T ss_pred CeEEEECC-CHHHHHHHHHHHHCCC---CEEEEecccHHHHHHHHHhh
Confidence 46788876 8999999999999995 58999999999888775543
|
| >d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Probab=96.73 E-value=0.0021 Score=47.28 Aligned_cols=79 Identities=20% Similarity=0.235 Sum_probs=51.0
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
.+++|.| .|+||...+..+...|+ ..|++.++++++++..+++. --.+ .|....++......+... +
T Consensus 30 ~~VlV~G-~G~iGl~a~~~ak~~Ga---~~Vi~~d~~~~r~~~a~~~G----a~~~--i~~~~~~~~~~~~~~~~~---~ 96 (174)
T d1e3ia2 30 STCAVFG-LGCVGLSAIIGCKIAGA---SRIIAIDINGEKFPKAKALG----ATDC--LNPRELDKPVQDVITELT---A 96 (174)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTC---SEEEEECSCGGGHHHHHHTT----CSEE--ECGGGCSSCHHHHHHHHH---T
T ss_pred CEEEEEC-CChHHHHHHHHHHHhCC---ceeeeeccchHHHHHHHHhC----CCcc--cCCccchhhhhhhHhhhh---c
Confidence 3789997 49999999999999995 58889999988866544432 1122 233222221333332222 2
Q ss_pred CCCccEEEecccc
Q psy11190 82 DQGLNVLVNNAGI 94 (248)
Q Consensus 82 ~~~iD~lv~~ag~ 94 (248)
+++|++|.++|.
T Consensus 97 -~G~d~vie~~G~ 108 (174)
T d1e3ia2 97 -GGVDYSLDCAGT 108 (174)
T ss_dssp -SCBSEEEESSCC
T ss_pred -CCCcEEEEeccc
Confidence 369999999984
|
| >d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]
Probab=96.72 E-value=0.0043 Score=45.67 Aligned_cols=122 Identities=7% Similarity=-0.017 Sum_probs=65.2
Q ss_pred eEEEecCCCchhHHHHHHHHhCCC---CCCceEEEeecCch--hHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhh
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGN---NQPAHIFATCRNKD--KAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDIS 77 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~---~~~~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~ 77 (248)
.+.||||+|.||..++-.|+.... .....+.+.+.+.. .++.+...............-.++.. .
T Consensus 26 kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~~~~~----------~ 95 (175)
T d7mdha1 26 NIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIGIDP----------Y 95 (175)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCH----------H
T ss_pred EEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCccccccc----------h
Confidence 589999999999999999987431 11235555555443 23333222221111111122222211 1
Q ss_pred hhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecC
Q psy11190 78 DVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSI 156 (248)
Q Consensus 78 ~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~ 156 (248)
+.+. +.|++|..+|.... ...+.+++- . ....+.+.+.+.+.+..+ ++..|+.++.+
T Consensus 96 ~~~~--~aDvVvi~ag~~rk----pg~tR~Dll---~----~N~~I~k~~~~~i~~~a~---------~~~~vlvv~NP 152 (175)
T d7mdha1 96 EVFE--DVDWALLIGAKPRG----PGMERAALL---D----INGQIFADQGKALNAVAS---------KNVKVLVVGNP 152 (175)
T ss_dssp HHTT--TCSEEEECCCCCCC----TTCCHHHHH---H----HHHHHHHHHHHHHHHHSC---------TTCEEEECSSS
T ss_pred hhcc--CCceEEEeeccCCC----CCCcHHHHH---H----HHHHHHHHHHHHHHhhCC---------CCcEEEEecCc
Confidence 2222 49999999987532 223444432 2 345667777777776421 34556666653
|
| >d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Haemophilus influenzae [TaxId: 727]
Probab=96.57 E-value=0.0014 Score=47.01 Aligned_cols=39 Identities=23% Similarity=0.161 Sum_probs=35.2
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHH
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAV 43 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~ 43 (248)
||++.|.||.|.+|..+|+.|.++| +.|.+.+|+.+...
T Consensus 9 ~~kI~iIGg~G~mG~~la~~L~~~G----~~V~~~d~~~~~~~ 47 (152)
T d2pv7a2 9 IHKIVIVGGYGKLGGLFARYLRASG----YPISILDREDWAVA 47 (152)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTT----CCEEEECTTCGGGH
T ss_pred CCeEEEEcCCCHHHHHHHHHHHHcC----CCcEeccccccccc
Confidence 6789999999999999999999999 99999999876544
|
| >d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=96.55 E-value=0.015 Score=41.54 Aligned_cols=122 Identities=14% Similarity=0.110 Sum_probs=65.2
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCC---CCceEEEeecCch--hHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhh
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNN---QPAHIFATCRNKD--KAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDIS 77 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~---~~~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~ 77 (248)
.+.|+||+|.+|.+++-.|+..+.- ....+++.+.+.. .++.+.................++...
T Consensus 5 KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~---------- 74 (154)
T d5mdha1 5 RVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKEE---------- 74 (154)
T ss_dssp EEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEESCHH----------
T ss_pred EEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcccccccccccccCcccc----------
Confidence 5889999999999999999865520 1124555555433 233332212222222223333333221
Q ss_pred hhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeecC
Q psy11190 78 DVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSSI 156 (248)
Q Consensus 78 ~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss~ 156 (248)
+.+. ..|++|..+|.... ...+.+++ + .....+.+.+.+.+.+..+ ..+.++.+|.+
T Consensus 75 ~~~~--~~dvVVitag~~~~----~g~sr~dl---l----~~N~~i~k~~~~~i~k~a~---------~~~~iivvsNP 131 (154)
T d5mdha1 75 IAFK--DLDVAILVGSMPRR----DGMERKDL---L----KANVKIFKCQGAALDKYAK---------KSVKVIVVGNP 131 (154)
T ss_dssp HHTT--TCSEEEECCSCCCC----TTCCTTTT---H----HHHHHHHHHHHHHHHHHSC---------TTCEEEECSSS
T ss_pred cccC--CceEEEEecccCCC----CCCchhHH---H----HHhHHHHHHHHHHHHhhCC---------CceEEEEecCc
Confidence 1112 38999999997543 12233332 2 2445677777777766421 34556666653
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=96.44 E-value=0.0064 Score=44.44 Aligned_cols=77 Identities=18% Similarity=0.234 Sum_probs=50.6
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
.+++|.|+ |++|...+..+...|+ ..|++.++++++++.+.++. -..+ .|..+.+. . +++.+..+
T Consensus 30 ~~VlI~G~-G~iG~~~~~~ak~~g~---~~v~~~~~~~~k~~~a~~~G----a~~~--i~~~~~~~-~----~~i~~~t~ 94 (174)
T d1f8fa2 30 SSFVTWGA-GAVGLSALLAAKVCGA---SIIIAVDIVESRLELAKQLG----ATHV--INSKTQDP-V----AAIKEITD 94 (174)
T ss_dssp CEEEEESC-SHHHHHHHHHHHHHTC---SEEEEEESCHHHHHHHHHHT----CSEE--EETTTSCH-H----HHHHHHTT
T ss_pred CEEEEeCC-CHHHhhhhhccccccc---ceeeeeccHHHHHHHHHHcC----CeEE--EeCCCcCH-H----HHHHHHcC
Confidence 36889987 8999999988888884 56677788877766555442 1122 35544332 2 33444433
Q ss_pred CCCccEEEecccc
Q psy11190 82 DQGLNVLVNNAGI 94 (248)
Q Consensus 82 ~~~iD~lv~~ag~ 94 (248)
+++|++|.+.|.
T Consensus 95 -gg~D~vid~~G~ 106 (174)
T d1f8fa2 95 -GGVNFALESTGS 106 (174)
T ss_dssp -SCEEEEEECSCC
T ss_pred -CCCcEEEEcCCc
Confidence 269999999884
|
| >d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Salmonella typhimurium [TaxId: 90371]
Probab=96.42 E-value=0.0034 Score=45.44 Aligned_cols=41 Identities=27% Similarity=0.285 Sum_probs=35.8
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHH
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA 47 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~ 47 (248)
||+.+| |.|-+|..+|+.|+++| +.|++.+|++++.+++.+
T Consensus 1 MkIgiI--GlG~MG~~~A~~L~~~G----~~V~~~d~~~~~~~~~~~ 41 (161)
T d1vpda2 1 MKVGFI--GLGIMGKPMSKNLLKAG----YSLVVSDRNPEAIADVIA 41 (161)
T ss_dssp CEEEEE--CCSTTHHHHHHHHHHTT----CEEEEECSCHHHHHHHHH
T ss_pred CEEEEE--ehhHHHHHHHHHHHHCC----CeEEEEeCCcchhHHHHH
Confidence 787777 77999999999999999 999999999988776643
|
| >d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=96.41 E-value=0.0047 Score=45.04 Aligned_cols=78 Identities=19% Similarity=0.259 Sum_probs=50.5
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCC-chhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDF-SKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~v~~~~~~i~~~~ 80 (248)
.+++|.|+ +|+|...+..+...|+ ..|+.+++++++.+...++-. -.+ .|..+. +. +....+ +..
T Consensus 30 ~tVlI~Ga-GGvG~~aiq~ak~~G~---~~vi~~~~~~~k~~~ak~lGa----~~~--i~~~~~~~~-~~~~~~---~~~ 95 (176)
T d2fzwa2 30 SVCAVFGL-GGVGLAVIMGCKVAGA---SRIIGVDINKDKFARAKEFGA----TEC--INPQDFSKP-IQEVLI---EMT 95 (176)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTC---SEEEEECSCGGGHHHHHHHTC----SEE--ECGGGCSSC-HHHHHH---HHT
T ss_pred CEEEEecc-hhHHHHHHHHHHHHhc---CceEEEcccHHHHHHHHHhCC----cEE--EeCCchhhH-HHHHHH---HHc
Confidence 37899987 5999999999988895 678888888877665554431 122 333332 22 333322 222
Q ss_pred cCCCccEEEecccc
Q psy11190 81 KDQGLNVLVNNAGI 94 (248)
Q Consensus 81 ~~~~iD~lv~~ag~ 94 (248)
+ .++|++|.+.|.
T Consensus 96 ~-~g~D~vid~~G~ 108 (176)
T d2fzwa2 96 D-GGVDYSFECIGN 108 (176)
T ss_dssp T-SCBSEEEECSCC
T ss_pred C-CCCcEeeecCCC
Confidence 3 269999999874
|
| >d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.40 E-value=0.007 Score=43.73 Aligned_cols=41 Identities=20% Similarity=0.094 Sum_probs=35.0
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHH
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELL 46 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~ 46 (248)
|+++-|. |.|-+|.++|+.|+++| +.|.+.+|+.++.+.+.
T Consensus 1 M~kIg~I-GlG~MG~~iA~~L~~~g----~~v~~~d~~~~~~~~~~ 41 (162)
T d3cuma2 1 MKQIAFI-GLGHMGAPMATNLLKAG----YLLNVFDLVQSAVDGLV 41 (162)
T ss_dssp CCEEEEE-CCSTTHHHHHHHHHHTT----CEEEEECSSHHHHHHHH
T ss_pred CCEEEEE-EEHHHHHHHHHHHHHCC----CeEEEEECchhhhhhhh
Confidence 6777776 56899999999999999 99999999988876654
|
| >d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=96.34 E-value=0.0075 Score=43.75 Aligned_cols=74 Identities=16% Similarity=0.264 Sum_probs=49.0
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
.+++|.|+ |++|...+..+...| ++|+++++++++++...++. .. .+ .|..+..+ .. + +..+
T Consensus 29 ~~vlI~Ga-G~vG~~a~q~ak~~G----~~vi~~~~~~~k~~~a~~lG---a~-~~--i~~~~~~~-~~---~---~~~~ 90 (168)
T d1piwa2 29 KKVGIVGL-GGIGSMGTLISKAMG----AETYVISRSSRKREDAMKMG---AD-HY--IATLEEGD-WG---E---KYFD 90 (168)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHT----CEEEEEESSSTTHHHHHHHT---CS-EE--EEGGGTSC-HH---H---HSCS
T ss_pred CEEEEECC-CCcchhHHHHhhhcc----ccccccccchhHHHHhhccC---Cc-EE--eeccchHH-HH---H---hhhc
Confidence 47889886 899999888777888 89999999998877665542 11 12 23333222 11 1 1112
Q ss_pred CCCccEEEeccccC
Q psy11190 82 DQGLNVLVNNAGIA 95 (248)
Q Consensus 82 ~~~iD~lv~~ag~~ 95 (248)
++|+++.+.+..
T Consensus 91 --~~d~vi~~~~~~ 102 (168)
T d1piwa2 91 --TFDLIVVCASSL 102 (168)
T ss_dssp --CEEEEEECCSCS
T ss_pred --ccceEEEEecCC
Confidence 589999887653
|
| >d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=96.29 E-value=0.0075 Score=43.91 Aligned_cols=77 Identities=22% Similarity=0.255 Sum_probs=49.5
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
.+++|.|+ |++|...+..+...|+ .+|+.+++++++++.+.+.. ..++ .|..+ +. .+...+... +
T Consensus 34 ~~vli~Ga-G~vG~~~~~~a~~~g~---~~vv~~~~~~~k~~~~~~~g----a~~~--i~~~~-~~-~~~~~~~~~---~ 98 (172)
T d1h2ba2 34 AYVAIVGV-GGLGHIAVQLLKVMTP---ATVIALDVKEEKLKLAERLG----ADHV--VDARR-DP-VKQVMELTR---G 98 (172)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHCC---CEEEEEESSHHHHHHHHHTT----CSEE--EETTS-CH-HHHHHHHTT---T
T ss_pred CEEEEeCC-ChHHHHHHHHHHhhcC---cccccccchhHHHHHHhhcc----ccee--ecCcc-cH-HHHHHHhhC---C
Confidence 36888875 9999998888888885 68888899887766554332 2222 33332 33 333332222 2
Q ss_pred CCCccEEEecccc
Q psy11190 82 DQGLNVLVNNAGI 94 (248)
Q Consensus 82 ~~~iD~lv~~ag~ 94 (248)
.++|++|.++|.
T Consensus 99 -~g~d~vid~~g~ 110 (172)
T d1h2ba2 99 -RGVNVAMDFVGS 110 (172)
T ss_dssp -CCEEEEEESSCC
T ss_pred -CCceEEEEecCc
Confidence 259999999984
|
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=96.29 E-value=0.0086 Score=43.40 Aligned_cols=72 Identities=22% Similarity=0.334 Sum_probs=48.1
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
.+++|.|+ |++|...+..+-..| +++++++++.++.+...++.. . . ..|..+... . ....+
T Consensus 32 ~~VlI~Ga-G~vG~~a~qlak~~G----a~~i~~~~~~~~~~~a~~lGa---d-~--~i~~~~~~~-~-------~~~~~ 92 (168)
T d1uufa2 32 KKVGVVGI-GGLGHMGIKLAHAMG----AHVVAFTTSEAKREAAKALGA---D-E--VVNSRNADE-M-------AAHLK 92 (168)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTT----CEEEEEESSGGGHHHHHHHTC---S-E--EEETTCHHH-H-------HTTTT
T ss_pred CEEEEecc-chHHHHHHHHhhccc----ccchhhccchhHHHHHhccCC---c-E--EEECchhhH-H-------HHhcC
Confidence 47899986 899999888888888 888999998887665444421 1 1 234444332 1 11111
Q ss_pred CCCccEEEecccc
Q psy11190 82 DQGLNVLVNNAGI 94 (248)
Q Consensus 82 ~~~iD~lv~~ag~ 94 (248)
++|++|.+.|.
T Consensus 93 --~~D~vid~~g~ 103 (168)
T d1uufa2 93 --SFDFILNTVAA 103 (168)
T ss_dssp --CEEEEEECCSS
T ss_pred --CCceeeeeeec
Confidence 59999999874
|
| >d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Probab=96.10 E-value=0.012 Score=42.78 Aligned_cols=79 Identities=16% Similarity=0.240 Sum_probs=50.7
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
.+++|.|+ +|+|...+..+...|+ ..|+.+++++++++...++- --++ .|..+.+..+++..+...
T Consensus 30 ~~VlI~G~-Gg~g~~~~~~~~~~g~---~~Vi~~~~~~~rl~~a~~~G----Ad~~--in~~~~~~~~~~~~~~~~---- 95 (175)
T d1cdoa2 30 STCAVFGL-GAVGLAAVMGCHSAGA---KRIIAVDLNPDKFEKAKVFG----ATDF--VNPNDHSEPISQVLSKMT---- 95 (175)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTC---SEEEEECSCGGGHHHHHHTT----CCEE--ECGGGCSSCHHHHHHHHH----
T ss_pred CEEEEEec-CCccchHHHHHHHHhh---chheeecchHHHHHHHHHcC----CcEE--EcCCCcchhHHHHHHhhc----
Confidence 36888875 7788888888888885 78999999998877655432 1122 344443321233222222
Q ss_pred CCCccEEEecccc
Q psy11190 82 DQGLNVLVNNAGI 94 (248)
Q Consensus 82 ~~~iD~lv~~ag~ 94 (248)
.+++|+++-+.|.
T Consensus 96 ~~G~d~vid~~G~ 108 (175)
T d1cdoa2 96 NGGVDFSLECVGN 108 (175)
T ss_dssp TSCBSEEEECSCC
T ss_pred cCCcceeeeecCC
Confidence 2359999999985
|
| >d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=96.08 E-value=0.004 Score=45.04 Aligned_cols=40 Identities=15% Similarity=0.144 Sum_probs=33.5
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHH
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELL 46 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~ 46 (248)
||..+| |.|-+|.++|+.|.++| ++|+..+|+++..+...
T Consensus 1 MkI~iI--G~G~mG~~lA~~l~~~g----~~V~~~d~~~~~~~~a~ 40 (165)
T d2f1ka2 1 MKIGVV--GLGLIGASLAGDLRRRG----HYLIGVSRQQSTCEKAV 40 (165)
T ss_dssp CEEEEE--CCSHHHHHHHHHHHHTT----CEEEEECSCHHHHHHHH
T ss_pred CEEEEE--eecHHHHHHHHHHHHCC----CEEEEEECCchHHHHHH
Confidence 776666 66999999999999999 99999999987766543
|
| >d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase species: Arthrobacter, strain 1c [TaxId: 1663]
Probab=96.06 E-value=0.0047 Score=45.19 Aligned_cols=41 Identities=17% Similarity=0.155 Sum_probs=35.0
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA 47 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~ 47 (248)
|++.|.|+ |.+|.++|..|+++| +.|.+.+|+++..+.+.+
T Consensus 2 k~iaIiGa-G~~G~~~A~~l~~~G----~~V~~~~r~~~~~~~~~~ 42 (184)
T d1bg6a2 2 KTYAVLGL-GNGGHAFAAYLALKG----QSVLAWDIDAQRIKEIQD 42 (184)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTT----CEEEEECSCHHHHHHHHH
T ss_pred CEEEEECc-cHHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHH
Confidence 56777777 899999999999999 999999999887766543
|
| >d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Trypanosoma brucei [TaxId: 5691]
Probab=95.90 E-value=0.005 Score=45.14 Aligned_cols=43 Identities=14% Similarity=0.122 Sum_probs=38.0
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHH
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALA 49 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~ 49 (248)
||..+| |.|-+|..+|+.|+++| +.|.+.+|++++.+++.+..
T Consensus 2 MkIGvI--GlG~MG~~ma~~L~~~G----~~V~~~dr~~~~~~~l~~~~ 44 (178)
T d1pgja2 2 MDVGVV--GLGVMGANLALNIAEKG----FKVAVFNRTYSKSEEFMKAN 44 (178)
T ss_dssp BSEEEE--CCSHHHHHHHHHHHHTT----CCEEEECSSHHHHHHHHHHT
T ss_pred CEEEEE--eehHHHHHHHHHHHHCC----CeEEEEECCHHHHHHHHHcC
Confidence 787777 88999999999999999 99999999999888775543
|
| >d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Sheep (Ovis orientalis aries) [TaxId: 9940]
Probab=95.79 E-value=0.034 Score=40.41 Aligned_cols=39 Identities=26% Similarity=0.281 Sum_probs=32.9
Q ss_pred EEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHH
Q psy11190 4 ILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA 47 (248)
Q Consensus 4 ~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~ 47 (248)
+-|.| .|-+|..+|+.|+++| +.|++++|++++.+++.+
T Consensus 5 Ig~IG-lG~MG~~mA~~L~~~G----~~V~v~dr~~~~~~~l~~ 43 (176)
T d2pgda2 5 IALIG-LAVMGQNLILNMNDHG----FVVCAFNRTVSKVDDFLA 43 (176)
T ss_dssp EEEEC-CSHHHHHHHHHHHHTT----CCEEEECSSTHHHHHHHH
T ss_pred EEEEe-EhHHHHHHHHHHHHCC----CeEEEEcCCHHHHHHHHH
Confidence 44444 5899999999999999 999999999998887743
|
| >d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=95.77 E-value=0.022 Score=40.88 Aligned_cols=41 Identities=22% Similarity=0.240 Sum_probs=33.9
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA 47 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~ 47 (248)
.+++|.|+ |++|...+..+...| ++|+.+++++++++...+
T Consensus 29 ~~VlV~Ga-G~vG~~~~~~ak~~G----~~Vi~~~~~~~~~~~a~~ 69 (166)
T d1llua2 29 QWVAISGI-GGLGHVAVQYARAMG----LHVAAIDIDDAKLELARK 69 (166)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHH
T ss_pred CEEEEeec-cccHHHHHHHHHHcC----CccceecchhhHHHhhhc
Confidence 46889876 999999998888888 899999999888765543
|
| >d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=95.73 E-value=0.032 Score=38.57 Aligned_cols=76 Identities=13% Similarity=0.132 Sum_probs=54.7
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEE-eecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFA-TCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|| +.|.|++|-.|+.+++.+.+++ +.++. .+++.... -.+.. +..|+|.++. ....++...+.
T Consensus 1 mk-i~i~G~~GrMG~~i~~~~~~~~----~~l~~~id~~~~~~---------~~~~D-VvIDFS~p~~-~~~~l~~~~~~ 64 (128)
T d1vm6a3 1 MK-YGIVGYSGRMGQEIQKVFSEKG----HELVLKVDVNGVEE---------LDSPD-VVIDFSSPEA-LPKTVDLCKKY 64 (128)
T ss_dssp CE-EEEETTTSHHHHHHHHHHHHTT----CEEEEEEETTEEEE---------CSCCS-EEEECSCGGG-HHHHHHHHHHH
T ss_pred CE-EEEECCCCHHHHHHHHHHhcCC----CeEEEEECCCcHHH---------hccCC-EEEEecCHHH-HHHHHHHHHhc
Confidence 65 8899999999999999999888 55554 44443220 11233 4589999999 78877777654
Q ss_pred hcCCCccEEEeccccCC
Q psy11190 80 VKDQGLNVLVNNAGIAA 96 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~ 96 (248)
++-+|+-..|...
T Consensus 65 ----~~p~ViGTTG~~~ 77 (128)
T d1vm6a3 65 ----RAGLVLGTTALKE 77 (128)
T ss_dssp ----TCEEEECCCSCCH
T ss_pred ----CCCEEEEcCCCCH
Confidence 4778888888653
|
| >d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Aquifex aeolicus [TaxId: 63363]
Probab=95.64 E-value=0.01 Score=42.93 Aligned_cols=43 Identities=23% Similarity=0.287 Sum_probs=35.4
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHH
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELL 46 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~ 46 (248)
||.++|.| .|-||.++|+.|.+.|.+ .+|+..+++++.++.+.
T Consensus 1 Mk~I~IIG-~G~mG~sla~~L~~~g~~--~~I~~~D~~~~~~~~a~ 43 (171)
T d2g5ca2 1 MQNVLIVG-VGFMGGSFAKSLRRSGFK--GKIYGYDINPESISKAV 43 (171)
T ss_dssp CCEEEEES-CSHHHHHHHHHHHHTTCC--SEEEEECSCHHHHHHHH
T ss_pred CCEEEEEc-cCHHHHHHHHHHHhcCCC--eEEEEEECChHHHHHHH
Confidence 89899997 599999999999999932 47888999987766553
|
| >d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Rck domain from putative potassium channel Kch species: Escherichia coli [TaxId: 562]
Probab=95.63 E-value=0.018 Score=40.93 Aligned_cols=75 Identities=16% Similarity=0.123 Sum_probs=53.4
Q ss_pred EEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhcCC
Q psy11190 4 ILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVKDQ 83 (248)
Q Consensus 4 ~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~~~ 83 (248)
++|.|. +.+|+.+++.|.++| ..|++++.++++..+..+... ...+.++.+|.++++. .+++ +-.
T Consensus 6 iII~G~-g~~g~~l~~~L~~~~----~~v~vId~d~~~~~~~~~~~~-~~~~~vi~Gd~~d~~~-L~~a--------~i~ 70 (153)
T d1id1a_ 6 FIVCGH-SILAINTILQLNQRG----QNVTVISNLPEDDIKQLEQRL-GDNADVIPGDSNDSSV-LKKA--------GID 70 (153)
T ss_dssp EEEECC-SHHHHHHHHHHHHTT----CCEEEEECCCHHHHHHHHHHH-CTTCEEEESCTTSHHH-HHHH--------TTT
T ss_pred EEEECC-CHHHHHHHHHHHHcC----CCEEEEeccchhHHHHHHHhh-cCCcEEEEccCcchHH-HHHh--------ccc
Confidence 566666 799999999999999 899999998876554433222 3478899999998765 3332 211
Q ss_pred CccEEEeccc
Q psy11190 84 GLNVLVNNAG 93 (248)
Q Consensus 84 ~iD~lv~~ag 93 (248)
..|.+|...+
T Consensus 71 ~a~~vi~~~~ 80 (153)
T d1id1a_ 71 RCRAILALSD 80 (153)
T ss_dssp TCSEEEECSS
T ss_pred cCCEEEEccc
Confidence 3778877753
|
| >d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) species: Escherichia coli [TaxId: 562]
Probab=95.59 E-value=0.035 Score=42.19 Aligned_cols=68 Identities=13% Similarity=0.166 Sum_probs=45.2
Q ss_pred CCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhcCCCccEEE
Q psy11190 10 NRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVKDQGLNVLV 89 (248)
Q Consensus 10 s~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~~~~iD~lv 89 (248)
||-.|.++|+.+..+| +.|.++...... .....+..+ .+. . ...+.+.+.+.+. ..|++|
T Consensus 31 SGk~G~aiA~~~~~~G----a~V~li~g~~~~--------~~p~~~~~~--~~~---t-~~~m~~~~~~~~~--~~D~~i 90 (223)
T d1u7za_ 31 SGKMGFAIAAAAARRG----ANVTLVSGPVSL--------PTPPFVKRV--DVM---T-ALEMEAAVNASVQ--QQNIFI 90 (223)
T ss_dssp CSHHHHHHHHHHHHTT----CEEEEEECSCCC--------CCCTTEEEE--ECC---S-HHHHHHHHHHHGG--GCSEEE
T ss_pred cHHHHHHHHHHHHHcC----Cchhhhhccccc--------Ccccccccc--eeh---h-hHHHHHHHHhhhc--cceeEe
Confidence 5778999999999999 889888765432 001123333 222 2 4555555666555 389999
Q ss_pred eccccCCc
Q psy11190 90 NNAGIAAK 97 (248)
Q Consensus 90 ~~ag~~~~ 97 (248)
++|.++..
T Consensus 91 ~aAAvsDf 98 (223)
T d1u7za_ 91 GCAAVADY 98 (223)
T ss_dssp ECCBCCSE
T ss_pred eeechhhh
Confidence 99998864
|
| >d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Short chain L-3-hydroxyacyl CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.58 E-value=0.012 Score=43.86 Aligned_cols=39 Identities=18% Similarity=0.293 Sum_probs=34.6
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL 45 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~ 45 (248)
|++.|.|+ |-+|..+|..|+.+| +.|++.+++++.++..
T Consensus 5 kkvaViGa-G~mG~~iA~~~a~~G----~~V~l~D~~~~~l~~a 43 (192)
T d1f0ya2 5 KHVTVIGG-GLMGAGIAQVAAATG----HTVVLVDQTEDILAKS 43 (192)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTT----CEEEEECSCHHHHHHH
T ss_pred EEEEEECc-CHHHHHHHHHHHhCC----CcEEEEECChHHHHHH
Confidence 67888888 779999999999999 9999999999876665
|
| >d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Escherichia coli [TaxId: 562]
Probab=95.52 E-value=0.044 Score=38.93 Aligned_cols=36 Identities=19% Similarity=0.269 Sum_probs=29.4
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecC
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRN 38 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~ 38 (248)
||++.|.|+||-||.....-+.+.-. .++|+.+.=+
T Consensus 1 MK~I~IlGsTGSIG~~tL~Vi~~~~d--~f~v~~Lsa~ 36 (151)
T d1q0qa2 1 MKQLTILGSTGSIGCSTLDVVRHNPE--HFRVVALVAG 36 (151)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTT--TEEEEEEEES
T ss_pred CCeEEEEcCCcHHHHHHHHHHHhCCC--CcEEEEEEec
Confidence 99999999999999998888877642 3788876544
|
| >d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=95.44 E-value=0.016 Score=42.40 Aligned_cols=42 Identities=26% Similarity=0.236 Sum_probs=33.3
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALA 49 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~ 49 (248)
|.++|.|+ ||.+++++..|.+. .+|.+..|+.++++++.+..
T Consensus 19 k~vlIlGa-GG~arai~~aL~~~-----~~i~I~nR~~~ka~~l~~~~ 60 (177)
T d1nvta1 19 KNIVIYGA-GGAARAVAFELAKD-----NNIIIANRTVEKAEALAKEI 60 (177)
T ss_dssp CEEEEECC-SHHHHHHHHHHTSS-----SEEEEECSSHHHHHHHHHHH
T ss_pred CEEEEECC-cHHHHHHHHHHccc-----cceeeehhhhhHHHHHHHHH
Confidence 57888865 67899999998643 38999999999988885433
|
| >d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Ketopantoate reductase PanE species: Escherichia coli [TaxId: 562]
Probab=95.38 E-value=0.0073 Score=43.33 Aligned_cols=36 Identities=28% Similarity=0.369 Sum_probs=30.7
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhH
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKA 42 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~ 42 (248)
|| ++|.|+ |.+|..++..|++.| +.|.+++|+.+..
T Consensus 1 Mk-I~IiGa-G~iG~~~a~~L~~~G----~~V~~~~r~~~~~ 36 (167)
T d1ks9a2 1 MK-ITVLGC-GALGQLWLTALCKQG----HEVQGWLRVPQPY 36 (167)
T ss_dssp CE-EEEECC-SHHHHHHHHHHHHTT----CEEEEECSSCCSE
T ss_pred CE-EEEECc-CHHHHHHHHHHHHCC----CceEEEEcCHHHh
Confidence 76 555566 999999999999999 9999999987653
|
| >d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Streptococcus pyogenes [TaxId: 1314]
Probab=95.37 E-value=0.012 Score=41.95 Aligned_cols=42 Identities=17% Similarity=0.139 Sum_probs=36.2
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHH
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLAL 48 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~ 48 (248)
||..+| |+|-+|.++++.|.+.| +.|++.+|+.++.+++.+.
T Consensus 1 MkIg~I--G~G~mG~al~~~l~~~~----~~i~v~~r~~~~~~~l~~~ 42 (152)
T d2ahra2 1 MKIGII--GVGKMASAIIKGLKQTP----HELIISGSSLERSKEIAEQ 42 (152)
T ss_dssp CEEEEE--CCSHHHHHHHHHHTTSS----CEEEEECSSHHHHHHHHHH
T ss_pred CEEEEE--eccHHHHHHHHHHHhCC----CeEEEEcChHHhHHhhccc
Confidence 887777 88999999999999988 8999999998887766443
|
| >d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=95.26 E-value=0.054 Score=38.64 Aligned_cols=41 Identities=20% Similarity=0.212 Sum_probs=33.5
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA 47 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~ 47 (248)
.+++|.|+ |++|...+..+...| ++|+++++++++++.+++
T Consensus 29 ~~vlv~G~-G~iG~~a~~~a~~~g----~~v~~~~~~~~r~~~~k~ 69 (168)
T d1rjwa2 29 EWVAIYGI-GGLGHVAVQYAKAMG----LNVVAVDIGDEKLELAKE 69 (168)
T ss_dssp CEEEEECC-STTHHHHHHHHHHTT----CEEEEECSCHHHHHHHHH
T ss_pred CEEEEeec-ccchhhhhHHHhcCC----CeEeccCCCHHHhhhhhh
Confidence 36888865 999999988888888 899999999888765544
|
| >d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Alpha-glucosidase AglA species: Thermotoga maritima [TaxId: 2336]
Probab=95.23 E-value=0.019 Score=41.85 Aligned_cols=132 Identities=14% Similarity=0.111 Sum_probs=65.1
Q ss_pred CceEEEecCCCchh--HHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhh---cCCceeEEeeccCCchhhhhHHHH
Q psy11190 1 MKSILITGCNRGLG--LGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQ---HSNLHVIELDVTDFSKQQDVLFKD 75 (248)
Q Consensus 1 ~k~~lVtGas~giG--~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~v~~~~~~ 75 (248)
||.++| || |..| .++...|+....-.+..+++.+.++++++........ .....+-....+|..
T Consensus 3 mKI~iI-Ga-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~td~~--------- 71 (171)
T d1obba1 3 VKIGII-GA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKTMNLD--------- 71 (171)
T ss_dssp CEEEEE-TT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEESCHH---------
T ss_pred cEEEEE-CC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEeCChh---------
Confidence 665555 54 4444 3455555543210125999999999887654322221 111111111122222
Q ss_pred hhhhhcCCCccEEEeccccCCccccCCCC-----------Ch-hhhhheee----ecchhhHHHHHHHhHHHHhhhhccc
Q psy11190 76 ISDVVKDQGLNVLVNNAGIAAKFTRLGLL-----------KP-EQMTDHFL----VNVTAPLMLTKTMLPLLKKASEANS 139 (248)
Q Consensus 76 i~~~~~~~~iD~lv~~ag~~~~~~~~~~~-----------~~-~~~~~~~~----~n~~~~~~l~~~~~~~l~~~~~~~~ 139 (248)
+.+. +.|++|+.++.... ...+.. .. +.-..... .....+.-+.+.+.+.+.+..
T Consensus 72 --eaL~--dad~Vv~~~~~g~~-~~~~~~~~i~~~~g~~~~~~~~~~~~~g~~~~~~~~rn~~i~~~i~~~i~~~~---- 142 (171)
T d1obba1 72 --DVII--DADFVINTAMVGGH-TYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLS---- 142 (171)
T ss_dssp --HHHT--TCSEEEECCCTTHH-HHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHC----
T ss_pred --hccc--CCCeEeeecccccc-cceeeehhcchhhhhccCCCccccCCCCCcceeeecchHHHHHHHHHHHHHHC----
Confidence 1222 38999999876532 100000 00 00000000 012346667888888888764
Q ss_pred CCCCCCCCceEEEeecCCC
Q psy11190 140 AAPLGSSRAAIVNVSSIMG 158 (248)
Q Consensus 140 ~~~~~~~~~~iv~vss~~~ 158 (248)
+++.++++|.+..
T Consensus 143 ------p~a~~i~~TNPvd 155 (171)
T d1obba1 143 ------PKAWYLQAANPIF 155 (171)
T ss_dssp ------TTCEEEECSSCHH
T ss_pred ------cCeEEEEECChHH
Confidence 6788999987543
|
| >d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: 6-phospho-beta-glucosidase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=95.15 E-value=0.099 Score=37.70 Aligned_cols=131 Identities=10% Similarity=0.040 Sum_probs=65.4
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchh--HHHHHHHH---hhcCCceeEEeeccCCchhhhhHHHH
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDK--AVELLALA---QQHSNLHVIELDVTDFSKQQDVLFKD 75 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~--~~~~~~~~---~~~~~~~~~~~D~~~~~~~v~~~~~~ 75 (248)
||.++|=+|+.|.+..++..+.....-....+++.+.+.+. ++.+.... ....+...-....+|..+ .
T Consensus 2 ~KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~~~~~~td~~~-------a 74 (169)
T d1s6ya1 2 LKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLTLDRRR-------A 74 (169)
T ss_dssp EEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHH-------H
T ss_pred cEEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCCCceeeecCCchh-------h
Confidence 45444433456667776666654321012589999988754 44332211 112223333333444322 1
Q ss_pred hhhhhcCCCccEEEeccccCCccccCCCCChhhhhheee------------ecchhhHHHHHHHhHHHHhhhhcccCCCC
Q psy11190 76 ISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFL------------VNVTAPLMLTKTMLPLLKKASEANSAAPL 143 (248)
Q Consensus 76 i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~------------~n~~~~~~l~~~~~~~l~~~~~~~~~~~~ 143 (248)
+. +-|++|+.||...... .. ..+.+..... ........+.+.+.+.+.+..
T Consensus 75 l~------gaDvVv~ta~~~~~~~-~~--r~~~i~~~~gi~~~~t~g~~~~~~~~~n~~i~~~i~~~i~~~~-------- 137 (169)
T d1s6ya1 75 LD------GADFVTTQFRVGGLEA-RA--KDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELC-------- 137 (169)
T ss_dssp HT------TCSEEEECCCTTHHHH-HH--HHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHC--------
T ss_pred cC------CCCEEEEccccCCCCC-ee--hhhhhhhhcCceeccccCcchhhhccccHHHHHHHHHHHhhcC--------
Confidence 12 3899999999764210 00 0001100000 012234556677777777753
Q ss_pred CCCCceEEEeecCC
Q psy11190 144 GSSRAAIVNVSSIM 157 (248)
Q Consensus 144 ~~~~~~iv~vss~~ 157 (248)
+++.++++|.+.
T Consensus 138 --pda~~i~vtNPv 149 (169)
T d1s6ya1 138 --PDAWLINFTNPA 149 (169)
T ss_dssp --TTCEEEECSSSH
T ss_pred --CCeEEEEeCChH
Confidence 688889888743
|
| >d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Fatty oxidation complex alpha subunit, middle domain species: Pseudomonas fragi [TaxId: 296]
Probab=94.94 E-value=0.015 Score=42.92 Aligned_cols=39 Identities=18% Similarity=0.135 Sum_probs=34.1
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL 45 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~ 45 (248)
|++.|.|+ |-+|..+|..|+.+| +.|++.+++++.++..
T Consensus 5 ~~vaViGa-G~mG~~iA~~~a~~G----~~V~l~D~~~~~l~~~ 43 (186)
T d1wdka3 5 KQAAVLGA-GIMGGGIAYQSASKG----TPILMKDINEHGIEQG 43 (186)
T ss_dssp SSEEEECC-HHHHHHHHHHHHHTT----CCEEEECSSHHHHHHH
T ss_pred CEEEEECc-CHHHHHHHHHHHhCC----CeEEEEECCHHHHhhh
Confidence 56778887 789999999999999 9999999999876655
|
| >d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Maltose-6'-phosphate glucosidase GlvA species: Bacillus subtilis [TaxId: 1423]
Probab=94.82 E-value=0.031 Score=40.52 Aligned_cols=122 Identities=11% Similarity=0.163 Sum_probs=61.8
Q ss_pred EEEecCCCchhHHHHHHHHhCCCC-CCceEEEeecCchhHHHHHHHHhh-----cCCceeEEeeccCCchhhhhHHHHhh
Q psy11190 4 ILITGCNRGLGLGMIKVLVGLGNN-QPAHIFATCRNKDKAVELLALAQQ-----HSNLHVIELDVTDFSKQQDVLFKDIS 77 (248)
Q Consensus 4 ~lVtGas~giG~~ia~~l~~~g~~-~~~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~v~~~~~~i~ 77 (248)
+.|.||+|.-...+...++.+-.. ....+++.+.++++++...+.... .....+.. .+|..
T Consensus 6 I~iIGaGsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~--~~d~~----------- 72 (167)
T d1u8xx1 6 IVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAA--TTDPE----------- 72 (167)
T ss_dssp EEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEE--ESCHH-----------
T ss_pred EEEECCChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEe--cCChh-----------
Confidence 556677654333344444432210 125899999999887754332221 11222221 11211
Q ss_pred hhhcCCCccEEEeccccCCccccCCCCChhhhhheeeecc----------------hhhHHHHHHHhHHHHhhhhcccCC
Q psy11190 78 DVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNV----------------TAPLMLTKTMLPLLKKASEANSAA 141 (248)
Q Consensus 78 ~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~----------------~~~~~l~~~~~~~l~~~~~~~~~~ 141 (248)
+.+. +-|+||..+|...... ..-+..+..|+ .-+..+.+.+.+.+.+..
T Consensus 73 eal~--~AD~Vvitag~~~~~g-------~~rd~~i~~~~Gi~~~~t~g~gg~~~~~r~i~ii~~i~~~i~~~~------ 137 (167)
T d1u8xx1 73 EAFT--DVDFVMAHIRVGKYAM-------RALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYS------ 137 (167)
T ss_dssp HHHS--SCSEEEECCCTTHHHH-------HHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHC------
T ss_pred hccC--CCCEEEECCCcCCCCc-------eeHHHhhchhcCceeeccccCcchheehhhHHHHHHHHHHHHhhC------
Confidence 1122 3899999999754311 11111111121 123445666677776653
Q ss_pred CCCCCCceEEEeecCC
Q psy11190 142 PLGSSRAAIVNVSSIM 157 (248)
Q Consensus 142 ~~~~~~~~iv~vss~~ 157 (248)
+++.++++|.+.
T Consensus 138 ----P~A~li~~TNPv 149 (167)
T d1u8xx1 138 ----PDAWMLNYSNPA 149 (167)
T ss_dssp ----TTCEEEECCSCH
T ss_pred ----CCeEEEEeCCHH
Confidence 678899988744
|
| >d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Neisseria meningitidis, serogroup B [TaxId: 487]
Probab=94.77 E-value=0.02 Score=40.71 Aligned_cols=42 Identities=19% Similarity=0.252 Sum_probs=34.4
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHH
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA 47 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~ 47 (248)
||..+| |.|.+|.++++.|++.|. ..|++.+|++++.+++.+
T Consensus 1 MkI~fI--G~G~MG~ai~~~l~~~~~---~~i~v~~r~~~~~~~l~~ 42 (152)
T d1yqga2 1 MNVYFL--GGGNMAAAVAGGLVKQGG---YRIYIANRGAEKRERLEK 42 (152)
T ss_dssp CEEEEE--CCSHHHHHHHHHHHHHCS---CEEEEECSSHHHHHHHHH
T ss_pred CEEEEE--cCcHHHHHHHHHHHHCCC---CcEEEEeCChhHHHHhhh
Confidence 776666 559999999999998773 899999999988776643
|
| >d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: 6-phospho-beta-glucosidase species: Thermotoga maritima [TaxId: 2336]
Probab=94.68 E-value=0.18 Score=35.95 Aligned_cols=52 Identities=6% Similarity=0.085 Sum_probs=29.5
Q ss_pred ceEEEeecCchhHHHHHHHHhh--cCCceeEEeeccCCchhhhhHHHHhhhhhcCCCccEEEeccccCC
Q psy11190 30 AHIFATCRNKDKAVELLALAQQ--HSNLHVIELDVTDFSKQQDVLFKDISDVVKDQGLNVLVNNAGIAA 96 (248)
Q Consensus 30 ~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~~~~iD~lv~~ag~~~ 96 (248)
..+++.+.+.++++...+.... ..... ...+.... +.+. +.|++|..+|...
T Consensus 30 ~el~L~Did~~k~~~~~d~~~~~~~~~~~---~~~t~~~~----------~~l~--~aDvVVita~~~~ 83 (162)
T d1up7a1 30 DEVIFYDIDEEKQKIVVDFVKRLVKDRFK---VLISDTFE----------GAVV--DAKYVIFQFRPGG 83 (162)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHHHTTSSE---EEECSSHH----------HHHT--TCSEEEECCCTTH
T ss_pred cEEEEEecCcHHHHHHHHHHHhhhccCce---EEEecCcc----------cccC--CCCEEEEecccCC
Confidence 6899999999887755443322 11211 22222111 1112 3899999998753
|
| >d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Trypanosome (Leishmania mexicana) [TaxId: 5665]
Probab=94.52 E-value=0.015 Score=43.09 Aligned_cols=42 Identities=12% Similarity=0.162 Sum_probs=34.4
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHH
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA 47 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~ 47 (248)
|+.+.|.|+ |..|.++|..|++.| +.|.+.+|+++..+++.+
T Consensus 7 m~KI~ViGa-G~wGtAlA~~La~~g----~~V~l~~r~~~~~~~i~~ 48 (189)
T d1n1ea2 7 LNKAVVFGS-GAFGTALAMVLSKKC----REVCVWHMNEEEVRLVNE 48 (189)
T ss_dssp EEEEEEECC-SHHHHHHHHHHHTTE----EEEEEECSCHHHHHHHHH
T ss_pred eceEEEECC-CHHHHHHHHHHHHcC----CeEEEEEecHHHHHHHhh
Confidence 566777766 559999999999999 999999999887766543
|
| >d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=94.00 E-value=0.27 Score=33.93 Aligned_cols=79 Identities=18% Similarity=0.236 Sum_probs=52.9
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEE-eecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFA-TCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
++.|.|++|-+|+.+++.+.+... ..++. +++. +.+... . ..+.. +..|+|.++. ....++...+.
T Consensus 1 kI~v~Ga~GrMG~~i~~~i~~~~~---~~l~~~~d~~-~~~~~~---~--~~~~D-vvIDFS~p~~-~~~~~~~~~~~-- 67 (135)
T d1yl7a1 1 RVGVLGAKGKVGATMVRAVAAADD---LTLSAELDAG-DPLSLL---T--DGNTE-VVIDFTHPDV-VMGNLEFLIDN-- 67 (135)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTT---SEEEEEECTT-CCTHHH---H--TTTCS-EEEECCCTTT-HHHHHHHHHHT--
T ss_pred CEEEECCCCHHHHHHHHHHHhCCC---CEEEEEEecC-Cchhhh---c--cccCC-EEEEcccHHH-HHHHHHHHHhc--
Confidence 478999999999999998876552 55544 3433 222221 1 11233 4599999999 77777777653
Q ss_pred CCCccEEEeccccCC
Q psy11190 82 DQGLNVLVNNAGIAA 96 (248)
Q Consensus 82 ~~~iD~lv~~ag~~~ 96 (248)
++-+|+-..|...
T Consensus 68 --~~~~ViGTTG~~~ 80 (135)
T d1yl7a1 68 --GIHAVVGTTGFTA 80 (135)
T ss_dssp --TCEEEECCCCCCH
T ss_pred --CCCEEEeccccch
Confidence 4778888888653
|
| >d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: GDP-mannose 6-dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=93.84 E-value=0.038 Score=41.11 Aligned_cols=39 Identities=13% Similarity=0.051 Sum_probs=34.1
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL 45 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~ 45 (248)
||..+| |.|-+|..+|..|+++| ++|+..+.|.+..+.+
T Consensus 1 MkI~Vi--GlG~vGl~~a~~la~~g----~~V~g~D~n~~~i~~l 39 (202)
T d1mv8a2 1 MRISIF--GLGYVGAVCAGCLSARG----HEVIGVDVSSTKIDLI 39 (202)
T ss_dssp CEEEEE--CCSTTHHHHHHHHHHTT----CEEEEECSCHHHHHHH
T ss_pred CEEEEE--CCCHhHHHHHHHHHhCC----CcEEEEeCCHHHHHHh
Confidence 887777 88999999999999999 9999999998765554
|
| >d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Conserved hypothetical protein MTH1747 species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=93.79 E-value=0.048 Score=38.54 Aligned_cols=39 Identities=8% Similarity=0.078 Sum_probs=32.6
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL 45 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~ 45 (248)
||..+| |.|-+|.++|+.|+++| +.|+..+++..+....
T Consensus 1 MkIgiI--G~G~mG~~ia~~l~~~g----~~v~~~~~~~~~~~~~ 39 (152)
T d1i36a2 1 LRVGFI--GFGEVAQTLASRLRSRG----VEVVTSLEGRSPSTIE 39 (152)
T ss_dssp CEEEEE--SCSHHHHHHHHHHHHTT----CEEEECCTTCCHHHHH
T ss_pred CEEEEE--cHHHHHHHHHHHHHHCC----CeEEEEcCchhHHHHH
Confidence 887777 77999999999999999 8999988877655443
|
| >d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD species: Escherichia coli [TaxId: 562]
Probab=93.79 E-value=0.027 Score=36.43 Aligned_cols=34 Identities=18% Similarity=0.220 Sum_probs=29.4
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCch
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKD 40 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~ 40 (248)
|+++|.|. |..|+++|+.|.++| ++|++.+.+..
T Consensus 6 K~v~ViGl-G~sG~s~a~~L~~~g----~~v~~~D~~~~ 39 (93)
T d2jfga1 6 KNVVIIGL-GLTGLSCVDFFLARG----VTPRVMDTRMT 39 (93)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTT----CCCEEEESSSS
T ss_pred CEEEEEeE-CHHHHHHHHHHHHCC----CEEEEeeCCcC
Confidence 67888887 668999999999999 89999998654
|
| >d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=93.68 E-value=0.037 Score=40.44 Aligned_cols=34 Identities=18% Similarity=0.143 Sum_probs=29.4
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCch
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKD 40 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~ 40 (248)
||+++| |+|..|.++|..|+++| ..|.+.+|..+
T Consensus 1 MkI~Vi--GaG~~GtalA~~la~~g----~~V~l~~r~~~ 34 (180)
T d1txga2 1 MIVSIL--GAGAMGSALSVPLVDNG----NEVRIWGTEFD 34 (180)
T ss_dssp CEEEEE--SCCHHHHHHHHHHHHHC----CEEEEECCGGG
T ss_pred CEEEEE--CCCHHHHHHHHHHHHCC----CEEEEEEeccc
Confidence 776666 66899999999999999 89999998654
|
| >d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: MraW-like putative methyltransferases domain: TM0872, methyltransferase domain species: Thermotoga maritima [TaxId: 2336]
Probab=93.53 E-value=0.067 Score=39.55 Aligned_cols=78 Identities=8% Similarity=0.103 Sum_probs=56.2
Q ss_pred EecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhh-cCCceeEEeeccCCchhhhhHHHHhhhhhcCCC
Q psy11190 6 ITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQ-HSNLHVIELDVTDFSKQQDVLFKDISDVVKDQG 84 (248)
Q Consensus 6 VtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~~~~ 84 (248)
+|-|+||...++.+.+- + .+|+.++++++.++...+.... ..++.++..+.++... ++ ..++..+
T Consensus 30 ~t~G~Gghs~~il~~~~--~----~~vi~~D~d~~~l~~a~~~l~~~~~r~~~~~~~f~~~~~----~~----~~~~~~~ 95 (192)
T d1m6ya2 30 CTVGEGGHSRAILEHCP--G----CRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADF----LL----KTLGIEK 95 (192)
T ss_dssp TTCTTSHHHHHHHHHCT--T----CEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHH----HH----HHTTCSC
T ss_pred ecCCCcHHHHHHHhcCC--C----CeEEEeechHHHHHHHHHhhccccccccchhHHHhhHHH----HH----HHcCCCC
Confidence 57788888888887763 4 6899999999988877655544 4578899988876433 22 2222236
Q ss_pred ccEEEeccccCCc
Q psy11190 85 LNVLVNNAGIAAK 97 (248)
Q Consensus 85 iD~lv~~ag~~~~ 97 (248)
+|.++...|.+.+
T Consensus 96 vdgIl~DlGvSs~ 108 (192)
T d1m6ya2 96 VDGILMDLGVSTY 108 (192)
T ss_dssp EEEEEEECSCCHH
T ss_pred cceeeeccchhHh
Confidence 9999999998653
|
| >d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=93.50 E-value=0.051 Score=38.38 Aligned_cols=39 Identities=10% Similarity=0.105 Sum_probs=28.7
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCc
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNK 39 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~ 39 (248)
||.+-|.||||-.|+.+.+.|+++..=.-..+++..++.
T Consensus 1 MkkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~ 39 (146)
T d1t4ba1 1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQ 39 (146)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSS
T ss_pred CcEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccc
Confidence 899999999999999999988765311124566665554
|
| >d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Siroheme synthase CysG, domain 1 species: Salmonella typhimurium [TaxId: 90371]
Probab=93.47 E-value=0.17 Score=33.65 Aligned_cols=35 Identities=17% Similarity=0.205 Sum_probs=29.4
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDK 41 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~ 41 (248)
|+++|.|++. +|..-++.|++.| ++|++.+....+
T Consensus 13 k~vlVvG~G~-va~~ka~~ll~~g----a~v~v~~~~~~~ 47 (113)
T d1pjqa1 13 RDCLIVGGGD-VAERKARLLLEAG----ARLTVNALTFIP 47 (113)
T ss_dssp CEEEEECCSH-HHHHHHHHHHHTT----BEEEEEESSCCH
T ss_pred CEEEEECCCH-HHHHHHHHHHHCC----CeEEEEeccCCh
Confidence 6788888754 9999999999999 899998876543
|
| >d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Putative methyltransferase CAC2371 species: Clostridium acetobutylicum [TaxId: 1488]
Probab=93.03 E-value=0.16 Score=38.47 Aligned_cols=71 Identities=11% Similarity=0.109 Sum_probs=52.7
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHH-HhhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLAL-AQQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
+++|=.|++.|. ++..|+++| .+|+.++.+++.++.+.+. ...+.++.++..|+.+...
T Consensus 39 ~~vLDiGCG~G~---~~~~l~~~g----~~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~~d~~~~~~------------- 98 (246)
T d1y8ca_ 39 DDYLDLACGTGN---LTENLCPKF----KNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLNI------------- 98 (246)
T ss_dssp TEEEEETCTTST---THHHHGGGS----SEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCCC-------------
T ss_pred CeEEEEeCcCCH---HHHHHHHhC----CccEeeccchhhhhhccccccccCccceeeccchhhhcc-------------
Confidence 468888998886 688899999 8999999998877766443 3334578899888876542
Q ss_pred cCCCccEEEeccc
Q psy11190 81 KDQGLNVLVNNAG 93 (248)
Q Consensus 81 ~~~~iD~lv~~ag 93 (248)
. .+.|++++..+
T Consensus 99 ~-~~fD~i~~~~~ 110 (246)
T d1y8ca_ 99 N-RKFDLITCCLD 110 (246)
T ss_dssp S-CCEEEEEECTT
T ss_pred c-ccccccceeee
Confidence 1 14899987644
|
| >d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Protein arginine N-methyltransferase 3, PRMT3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.91 E-value=0.2 Score=39.53 Aligned_cols=72 Identities=13% Similarity=0.248 Sum_probs=48.0
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHH--HHhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA--LAQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
|++|-.|+++|+ ++..+++.|+ .+|+.++.++........ ......++.++..|+.+...
T Consensus 37 ~~VLDiGcG~G~---lsl~aa~~Ga---~~V~aid~s~~~~~a~~~~~~~~~~~~i~~~~~~~~~l~~------------ 98 (311)
T d2fyta1 37 KVVLDVGCGTGI---LSMFAAKAGA---KKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEVHL------------ 98 (311)
T ss_dssp CEEEEETCTTSH---HHHHHHHTTC---SEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCC------------
T ss_pred CEEEEECCCCCH---HHHHHHHcCC---CEEEEEeCHHHHHHHHHHHHHhCCCccceEEEeeHHHhcC------------
Confidence 579999999886 5666777785 689999988754332222 22224478888888877543
Q ss_pred hcCCCccEEEecc
Q psy11190 80 VKDQGLNVLVNNA 92 (248)
Q Consensus 80 ~~~~~iD~lv~~a 92 (248)
+..++|+|+...
T Consensus 99 -~~~~~D~Ivse~ 110 (311)
T d2fyta1 99 -PVEKVDVIISEW 110 (311)
T ss_dssp -SCSCEEEEEECC
T ss_pred -ccccceEEEEee
Confidence 112589998753
|
| >d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=92.88 E-value=0.38 Score=35.91 Aligned_cols=74 Identities=20% Similarity=0.213 Sum_probs=54.5
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhh--cCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQ--HSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
++|..|+++|--.++.-+|+ | .+|+.++++++-.+...+.... ..++.++..|..+-..
T Consensus 81 ~VLeIGsGsGY~taila~l~--g----~~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd~~~g~~------------- 141 (215)
T d1jg1a_ 81 NILEVGTGSGWNAALISEIV--K----TDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGFP------------- 141 (215)
T ss_dssp CEEEECCTTSHHHHHHHHHH--C----SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCG-------------
T ss_pred eEEEecCCCChhHHHHHHhh--C----ceeEEEeccHHHHHHHHHHHHHcCCceeEEEECccccCCc-------------
Confidence 68999999999999888888 6 6799999997766655443333 3578899888865322
Q ss_pred cCCCccEEEeccccC
Q psy11190 81 KDQGLNVLVNNAGIA 95 (248)
Q Consensus 81 ~~~~iD~lv~~ag~~ 95 (248)
...+.|.++.+++..
T Consensus 142 ~~~pfD~Iiv~~a~~ 156 (215)
T d1jg1a_ 142 PKAPYDVIIVTAGAP 156 (215)
T ss_dssp GGCCEEEEEECSBBS
T ss_pred ccCcceeEEeecccc
Confidence 112589999888764
|
| >d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Thermotoga maritima [TaxId: 2336]
Probab=91.55 E-value=0.53 Score=29.80 Aligned_cols=70 Identities=9% Similarity=0.176 Sum_probs=43.2
Q ss_pred CceEEEecCCCchhH-HHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 1 MKSILITGCNRGLGL-GMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 1 ~k~~lVtGas~giG~-~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
||.-+| |-+|+|- ++|+.|.++| +.|...|+.... .+.++...+ +.+.. . -+.+. +
T Consensus 2 ~~ihfi--GIgG~GMs~LA~~L~~~G----~~VsGSD~~~~~--~t~~L~~~G--i~i~~-g-h~~~~--------i--- 58 (89)
T d1j6ua1 2 MKIHFV--GIGGIGMSAVALHEFSNG----NDVYGSNIEETE--RTAYLRKLG--IPIFV-P-HSADN--------W--- 58 (89)
T ss_dssp CEEEEE--TTTSHHHHHHHHHHHHTT----CEEEEECSSCCH--HHHHHHHTT--CCEES-S-CCTTS--------C---
T ss_pred cEEEEE--eECHHHHHHHHHHHHhCC----CeEEEEeCCCCh--hHHHHHHCC--CeEEe-e-ecccc--------c---
Confidence 565555 5677776 6899999999 999999987543 223343322 22221 1 12222 1
Q ss_pred hcCCCccEEEeccccCC
Q psy11190 80 VKDQGLNVLVNNAGIAA 96 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~~ 96 (248)
. ..|.||...++..
T Consensus 59 -~--~~d~vV~SsAI~~ 72 (89)
T d1j6ua1 59 -Y--DPDLVIKTPAVRD 72 (89)
T ss_dssp -C--CCSEEEECTTCCT
T ss_pred -C--CCCEEEEecCcCC
Confidence 1 3899999988753
|
| >d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: L-alanine dehydrogenase species: Phormidium lapideum [TaxId: 32060]
Probab=91.24 E-value=0.99 Score=32.12 Aligned_cols=74 Identities=19% Similarity=0.245 Sum_probs=49.0
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhcC
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVKD 82 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~~ 82 (248)
+++|.|+ |--|...++.....| +.|.+++.+.++++++...... ++. .-.++.+. +.+.+.
T Consensus 34 ~V~ViGa-GvaG~~A~~~A~~lG----A~V~~~D~~~~~l~~l~~~~~~--~~~---~~~~~~~~----l~~~~~----- 94 (168)
T d1pjca1 34 KVVILGG-GVVGTEAAKMAVGLG----AQVQIFDINVERLSYLETLFGS--RVE---LLYSNSAE----IETAVA----- 94 (168)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHHGG--GSE---EEECCHHH----HHHHHH-----
T ss_pred EEEEECC-ChHHHHHHHHHhhCC----CEEEEEeCcHHHHHHHHHhhcc--cce---eehhhhhh----HHHhhc-----
Confidence 4566654 567888888888889 9999999999988887665432 222 22333222 222233
Q ss_pred CCccEEEeccccCC
Q psy11190 83 QGLNVLVNNAGIAA 96 (248)
Q Consensus 83 ~~iD~lv~~ag~~~ 96 (248)
..|+||.++-+..
T Consensus 95 -~aDivI~aalipG 107 (168)
T d1pjca1 95 -EADLLIGAVLVPG 107 (168)
T ss_dssp -TCSEEEECCCCTT
T ss_pred -cCcEEEEeeecCC
Confidence 3899999987654
|
| >d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Hypothetical methyltransferase PH1305 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=90.92 E-value=0.55 Score=35.14 Aligned_cols=70 Identities=13% Similarity=0.126 Sum_probs=50.6
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHH-hhcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALA-QQHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
+++|=.|+++| ..+..|+++| ++|+.++.+++-++.+.+.. ..+.++.++..|+.+...
T Consensus 43 ~~iLDiGcGtG---~~~~~l~~~~----~~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d~~~l~~------------- 102 (251)
T d1wzna1 43 RRVLDLACGTG---IPTLELAERG----YEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAF------------- 102 (251)
T ss_dssp CEEEEETCTTC---HHHHHHHHTT----CEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCC-------------
T ss_pred CEEEEeCCCCC---ccchhhcccc----eEEEEEeeccccccccccccccccccchheehhhhhccc-------------
Confidence 46788888876 3466788899 89999999987777664433 334578899999876542
Q ss_pred cCCCccEEEecc
Q psy11190 81 KDQGLNVLVNNA 92 (248)
Q Consensus 81 ~~~~iD~lv~~a 92 (248)
+ ...|.|++.-
T Consensus 103 ~-~~fD~I~~~~ 113 (251)
T d1wzna1 103 K-NEFDAVTMFF 113 (251)
T ss_dssp C-SCEEEEEECS
T ss_pred c-cccchHhhhh
Confidence 1 1489888763
|
| >d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Hypothetical protein PH0226 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=90.75 E-value=0.71 Score=33.69 Aligned_cols=71 Identities=18% Similarity=0.206 Sum_probs=50.7
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHH-hhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALA-QQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
++|=.||++|. ++..|++.| ..|+.++.+.+.++...+.. .....+..+..|..+... .
T Consensus 40 ~ILDiGcG~G~---~~~~la~~~----~~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~d~~~l~~-------------~ 99 (226)
T d1ve3a1 40 KVLDLACGVGG---FSFLLEDYG----FEVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSF-------------E 99 (226)
T ss_dssp EEEEETCTTSH---HHHHHHHTT----CEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCS-------------C
T ss_pred EEEEECCCcch---hhhhHhhhh----cccccccccccchhhhhhhhccccccccccccccccccc-------------c
Confidence 57888998877 567888888 89999999988777764443 334567777778776432 1
Q ss_pred CCCccEEEeccc
Q psy11190 82 DQGLNVLVNNAG 93 (248)
Q Consensus 82 ~~~iD~lv~~ag 93 (248)
+...|+|++...
T Consensus 100 ~~~fD~I~~~~~ 111 (226)
T d1ve3a1 100 DKTFDYVIFIDS 111 (226)
T ss_dssp TTCEEEEEEESC
T ss_pred CcCceEEEEecc
Confidence 124899998754
|
| >d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: N5-glutamine methyltransferase, HemK domain: N5-glutamine methyltransferase, HemK species: Thermotoga maritima [TaxId: 2336]
Probab=90.70 E-value=1.1 Score=34.58 Aligned_cols=76 Identities=13% Similarity=0.172 Sum_probs=45.7
Q ss_pred eEEEecCCCc-hhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHH-HHh--hcCCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 3 SILITGCNRG-LGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQ--QHSNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 3 ~~lVtGas~g-iG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~-~~~--~~~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
+++-.|++|| |+.+++ +. .. ++|+.++-+++.++-+.+ ... ...++.+...|+.+.-. +
T Consensus 113 ~vld~g~GsG~i~~~la-~~--~~----~~v~a~Dis~~Al~~A~~Na~~~~~~~~~~i~~~~~~~~~~----------~ 175 (271)
T d1nv8a_ 113 TVADIGTGSGAIGVSVA-KF--SD----AIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPFK----------E 175 (271)
T ss_dssp EEEEESCTTSHHHHHHH-HH--SS----CEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGGG----------G
T ss_pred EEEEeeeeeehhhhhhh-hc--cc----ceeeechhhhhHHHHHHHHHHHcCCCceeEEeecccccccc----------c
Confidence 4554555555 555544 33 35 789999999887765532 221 22345666666654322 2
Q ss_pred hhcCCCccEEEeccccCCc
Q psy11190 79 VVKDQGLNVLVNNAGIAAK 97 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~ 97 (248)
..+ ++|++|.|..+...
T Consensus 176 ~~~--~fDlIVsNPPYI~~ 192 (271)
T d1nv8a_ 176 KFA--SIEMILSNPPYVKS 192 (271)
T ss_dssp GTT--TCCEEEECCCCBCG
T ss_pred ccC--cccEEEEcccccCc
Confidence 223 59999999987754
|
| >d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Sulfolobus tokodaii [TaxId: 111955]
Probab=90.66 E-value=0.61 Score=34.98 Aligned_cols=72 Identities=17% Similarity=0.063 Sum_probs=50.4
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhcC
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVKD 82 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~~ 82 (248)
++|-.|+++|--.++. ++.+ .+|+.++.+++..+...+......++.++..|..+.-. + +
T Consensus 73 ~VLdIG~GsGy~ta~L---a~l~----~~V~aiE~~~~~~~~A~~~~~~~~nv~~~~~d~~~g~~----------~---~ 132 (224)
T d1vbfa_ 73 KVLEIGTGIGYYTALI---AEIV----DKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYE----------E---E 132 (224)
T ss_dssp EEEEECCTTSHHHHHH---HHHS----SEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCG----------G---G
T ss_pred eEEEecCCCCHHHHHH---HHHh----cccccccccHHHHHHHHHHHhcccccccccCchhhcch----------h---h
Confidence 6888899888655544 4445 78999999988777666655556788888888754221 1 1
Q ss_pred CCccEEEecccc
Q psy11190 83 QGLNVLVNNAGI 94 (248)
Q Consensus 83 ~~iD~lv~~ag~ 94 (248)
++.|.++.+++.
T Consensus 133 ~pfD~Iiv~~a~ 144 (224)
T d1vbfa_ 133 KPYDRVVVWATA 144 (224)
T ss_dssp CCEEEEEESSBB
T ss_pred hhHHHHHhhcch
Confidence 258999988764
|
| >d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=90.43 E-value=0.1 Score=36.59 Aligned_cols=33 Identities=24% Similarity=0.342 Sum_probs=28.9
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNK 39 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~ 39 (248)
|++||.|| |.+|..-++.|++.| ++|++++...
T Consensus 14 krvLViGg-G~va~~ka~~Ll~~G----A~VtVvap~~ 46 (150)
T d1kyqa1 14 KRILLIGG-GEVGLTRLYKLMPTG----CKLTLVSPDL 46 (150)
T ss_dssp CEEEEEEE-SHHHHHHHHHHGGGT----CEEEEEEEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHHCC----CEEEEEeCCC
Confidence 68999999 559999999999999 8999997653
|
| >d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ta1320-like domain: Hypothetical protein Ta1320 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=90.42 E-value=0.52 Score=34.63 Aligned_cols=68 Identities=16% Similarity=0.192 Sum_probs=46.5
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVK 81 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~ 81 (248)
|++|=.|+++|+ ++..++..|+ .+|+.++.+++.++.+.+ ...++.++..|+.+...
T Consensus 50 k~VLDlGcGtG~---l~i~a~~~ga---~~V~~vDid~~a~~~ar~---N~~~~~~~~~D~~~l~~-------------- 106 (197)
T d1ne2a_ 50 RSVIDAGTGNGI---LACGSYLLGA---ESVTAFDIDPDAIETAKR---NCGGVNFMVADVSEISG-------------- 106 (197)
T ss_dssp SEEEEETCTTCH---HHHHHHHTTB---SEEEEEESCHHHHHHHHH---HCTTSEEEECCGGGCCC--------------
T ss_pred CEEEEeCCCCcH---HHHHHHHcCC---CcccccccCHHHHHHHHH---ccccccEEEEehhhcCC--------------
Confidence 578888888874 3344556674 679999988776554432 23467888888754322
Q ss_pred CCCccEEEecccc
Q psy11190 82 DQGLNVLVNNAGI 94 (248)
Q Consensus 82 ~~~iD~lv~~ag~ 94 (248)
++|+||.|..+
T Consensus 107 --~fD~Vi~NPPf 117 (197)
T d1ne2a_ 107 --KYDTWIMNPPF 117 (197)
T ss_dssp --CEEEEEECCCC
T ss_pred --cceEEEeCccc
Confidence 59999999654
|
| >d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Potassium channel-related protein MthK species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]
Probab=90.11 E-value=0.15 Score=34.63 Aligned_cols=53 Identities=21% Similarity=0.327 Sum_probs=39.4
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCch
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSK 67 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 67 (248)
-++|.| -+.+|+.+++.|. + ..|++++.+++..+.+. ...+.++.+|.++++.
T Consensus 2 HivI~G-~g~~g~~l~~~L~--~----~~i~vi~~d~~~~~~~~-----~~~~~~i~Gd~~~~~~ 54 (129)
T d2fy8a1 2 HVVICG-WSESTLECLRELR--G----SEVFVLAEDENVRKKVL-----RSGANFVHGDPTRVSD 54 (129)
T ss_dssp CEEEES-CCHHHHHHHHTSC--G----GGEEEEESCTTHHHHHH-----HTTCEEEESCTTSHHH
T ss_pred EEEEEC-CCHHHHHHHHHHc--C----CCCEEEEcchHHHHHHH-----hcCccccccccCCHHH
Confidence 456766 4789999999995 6 66888888887655442 2367888999998765
|
| >d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Thermotoga maritima [TaxId: 2336]
Probab=89.95 E-value=1 Score=33.25 Aligned_cols=75 Identities=12% Similarity=0.074 Sum_probs=48.4
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhh--cCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQ--HSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
++|-.|+++|--.++..++.... .+|+.++.+++..+...+.... ..++.++..|..+...
T Consensus 78 ~VLdiG~GtG~~s~~la~~~~~~----g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~d~~~~~~------------- 140 (213)
T d1dl5a1 78 RVLEIGGGTGYNAAVMSRVVGEK----GLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVP------------- 140 (213)
T ss_dssp EEEEECCTTSHHHHHHHHHHCTT----CEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCG-------------
T ss_pred eEEEecCccchhHHHHHHHhCCC----CcEEEeecchhhHHHhhhhHhhhcccccccccCchHHccc-------------
Confidence 68888888776665555555334 6899999998877766544333 2356666666654221
Q ss_pred cCCCccEEEecccc
Q psy11190 81 KDQGLNVLVNNAGI 94 (248)
Q Consensus 81 ~~~~iD~lv~~ag~ 94 (248)
.....|.++++++.
T Consensus 141 ~~~~fD~I~~~~~~ 154 (213)
T d1dl5a1 141 EFSPYDVIFVTVGV 154 (213)
T ss_dssp GGCCEEEEEECSBB
T ss_pred cccchhhhhhhccH
Confidence 11248999988764
|
| >d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Protein arginine N-methyltransferase 1, PRMT1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=89.68 E-value=0.69 Score=36.38 Aligned_cols=71 Identities=10% Similarity=0.171 Sum_probs=46.7
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHh---hcCCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQ---QHSNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
|++|-.|++.|+ ++..+++.|+ .+|+.++.++. .....+... ...++.++..|+.+.+.
T Consensus 35 ~~VLDiGcG~G~---ls~~aa~~Ga---~~V~avd~s~~-~~~a~~~~~~n~~~~~v~~~~~~~~~~~~----------- 96 (316)
T d1oria_ 35 KVVLDVGSGTGI---LCMFAAKAGA---RKVIGIECSSI-SDYAVKIVKANKLDHVVTIIKGKVEEVEL----------- 96 (316)
T ss_dssp CEEEEETCTTSH---HHHHHHHTTC---SEEEEEECSTT-HHHHHHHHHHTTCTTTEEEEESCTTTCCC-----------
T ss_pred CEEEEEecCCcH---HHHHHHHhCC---CEEEEEcCcHH-HhhhhhHHHHhCCccccceEeccHHHccc-----------
Confidence 678989999886 4566777785 68999997754 343333222 23468888888877543
Q ss_pred hhcCCCccEEEecc
Q psy11190 79 VVKDQGLNVLVNNA 92 (248)
Q Consensus 79 ~~~~~~iD~lv~~a 92 (248)
...++|++++..
T Consensus 97 --~~~~~D~ivs~~ 108 (316)
T d1oria_ 97 --PVEKVDIIISEW 108 (316)
T ss_dssp --SSSCEEEEEECC
T ss_pred --ccceeEEEeeee
Confidence 112488888754
|
| >d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ta1320-like domain: Hypothetical protein PH1948 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=89.58 E-value=0.8 Score=33.55 Aligned_cols=71 Identities=20% Similarity=0.322 Sum_probs=44.7
Q ss_pred ceEEEecCCCc-hhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHH-HHhhcCCceeEEeeccCCchhhhhHHHHhhhh
Q psy11190 2 KSILITGCNRG-LGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA-LAQQHSNLHVIELDVTDFSKQQDVLFKDISDV 79 (248)
Q Consensus 2 k~~lVtGas~g-iG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~ 79 (248)
+++|=-|+++| ++. .++.+|+ ..|+.++.+++.++.+.+ +...+.+..++..|+.+...
T Consensus 48 ~~vLDlg~GtG~l~i----~a~~~g~---~~v~~vdi~~~~~~~a~~N~~~~~~~~~~~~~d~~~~~~------------ 108 (201)
T d1wy7a1 48 KVVADLGAGTGVLSY----GALLLGA---KEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEFNS------------ 108 (201)
T ss_dssp CEEEEETCTTCHHHH----HHHHTTC---SEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGCCC------------
T ss_pred CEEEECcCcchHHHH----HHHHcCC---CEEEEEcCcHHHHHHHHHHHHHcCCCceEEECchhhhCC------------
Confidence 35665666655 443 3445674 689999999887776633 33333456666666644322
Q ss_pred hcCCCccEEEeccccC
Q psy11190 80 VKDQGLNVLVNNAGIA 95 (248)
Q Consensus 80 ~~~~~iD~lv~~ag~~ 95 (248)
++|+||.|..+.
T Consensus 109 ----~fD~Vi~nPP~~ 120 (201)
T d1wy7a1 109 ----RVDIVIMNPPFG 120 (201)
T ss_dssp ----CCSEEEECCCCS
T ss_pred ----cCcEEEEcCccc
Confidence 599999998653
|
| >d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Phenylalanine dehydrogenase species: Rhodococcus sp., M4 [TaxId: 1831]
Probab=89.52 E-value=0.29 Score=36.21 Aligned_cols=39 Identities=13% Similarity=0.320 Sum_probs=32.9
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL 45 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~ 45 (248)
|+++|-| .|.+|.++|+.|.+.| ++|++.+.+.+.....
T Consensus 28 k~v~IqG-~G~VG~~~A~~L~~~G----akvvv~d~d~~~~~~~ 66 (201)
T d1c1da1 28 LTVLVQG-LGAVGGSLASLAAEAG----AQLLVADTDTERVAHA 66 (201)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTT----CEEEEECSCHHHHHHH
T ss_pred CEEEEEC-CCHHHHHHHHHHHHCC----CEEEEecchHHHHHHH
Confidence 6788876 7889999999999999 8999999887765543
|
| >d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Phosphopantothenoylcysteine synthetase species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.45 E-value=0.45 Score=37.25 Aligned_cols=25 Identities=12% Similarity=0.157 Sum_probs=21.1
Q ss_pred CCchhHHHHHHHHhCCCCCCceEEEeecC
Q psy11190 10 NRGLGLGMIKVLVGLGNNQPAHIFATCRN 38 (248)
Q Consensus 10 s~giG~~ia~~l~~~g~~~~~~V~~~~r~ 38 (248)
||-.|.++|+.|..+| +.|+++.+.
T Consensus 45 SGk~G~alA~~~~~~G----a~V~li~g~ 69 (290)
T d1p9oa_ 45 SGRRGATSAEAFLAAG----YGVLFLYRA 69 (290)
T ss_dssp CCHHHHHHHHHHHHTT----CEEEEEEET
T ss_pred chHHHHHHHHHHHHcC----CEEEEEecC
Confidence 4567999999999999 899988543
|
| >d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.12 E-value=1.6 Score=30.88 Aligned_cols=35 Identities=26% Similarity=0.413 Sum_probs=29.9
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDK 41 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~ 41 (248)
|+++|.| .|-||+.+|+.|...| ++|++++.++-+
T Consensus 25 k~v~V~G-yG~iG~g~A~~~rg~G----~~V~v~e~dp~~ 59 (163)
T d1li4a1 25 KVAVVAG-YGDVGKGCAQALRGFG----ARVIITEIDPIN 59 (163)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTT----CEEEEECSCHHH
T ss_pred CEEEEec-cccccHHHHHHHHhCC----CeeEeeecccch
Confidence 6777765 5689999999999999 999999998754
|
| >d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.95 E-value=0.89 Score=33.74 Aligned_cols=40 Identities=10% Similarity=0.181 Sum_probs=32.7
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLAL 48 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~ 48 (248)
+++|..|++.|- .+..|+++| ++|+.++-+++.++.+.+.
T Consensus 47 ~rvLd~GCG~G~---~a~~LA~~G----~~V~gvD~S~~ai~~a~~~ 86 (229)
T d2bzga1 47 LRVFFPLCGKAV---EMKWFADRG----HSVVGVEISELGIQEFFTE 86 (229)
T ss_dssp CEEEETTCTTCT---HHHHHHHTT----CEEEEECSCHHHHHHHHHH
T ss_pred CEEEEeCCCCcH---HHHHHHhCC----CcEEEEeCCHHHHHHHHHH
Confidence 479999998873 588899999 9999999999887766443
|
| >d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Nicotinamide nucleotide transhydrogenase dI component species: Rhodospirillum rubrum [TaxId: 1085]
Probab=88.53 E-value=1.4 Score=31.76 Aligned_cols=42 Identities=26% Similarity=0.292 Sum_probs=33.2
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHH
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALA 49 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~ 49 (248)
.++|.|+ |-.|...++.....| ++|.+++.+.++++++.++.
T Consensus 31 ~VvViGa-GvaG~~Aa~~A~~lG----A~V~v~D~~~~~~~~l~~l~ 72 (183)
T d1l7da1 31 RVLVFGV-GVAGLQAIATAKRLG----AVVMATDVRAATKEQVESLG 72 (183)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTT----CEEEEECSCSTTHHHHHHTT
T ss_pred EEEEEcC-cHHHHHHHHHHHHcC----CEEEEEeccHHHHHHHHHhh
Confidence 3566654 567888888888888 99999999999988876653
|
| >d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Myxococcus xanthus [TaxId: 34]
Probab=88.45 E-value=0.21 Score=38.02 Aligned_cols=33 Identities=18% Similarity=0.180 Sum_probs=26.4
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCc
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNK 39 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~ 39 (248)
||+++| || |--|...|..|+++| .+|.++.++.
T Consensus 1 m~V~II-Ga-G~aGL~aA~~L~~~G----~~V~vlE~~~ 33 (347)
T d2ivda1 1 MNVAVV-GG-GISGLAVAHHLRSRG----TDAVLLESSA 33 (347)
T ss_dssp CCEEEE-CC-BHHHHHHHHHHHTTT----CCEEEECSSS
T ss_pred CeEEEE-CC-CHHHHHHHHHHHhCC----CCEEEEecCC
Confidence 764444 54 677889999999999 8999998864
|
| >d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Pseudomonas syringae [TaxId: 317]
Probab=88.21 E-value=0.57 Score=33.36 Aligned_cols=41 Identities=15% Similarity=0.270 Sum_probs=33.8
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALA 49 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~ 49 (248)
+++|..|++.| ..+..|+++| ++|+.++.+++.++...+..
T Consensus 22 ~rvLd~GCG~G---~~a~~la~~G----~~V~gvD~S~~~i~~a~~~~ 62 (201)
T d1pjza_ 22 ARVLVPLCGKS---QDMSWLSGQG----YHVVGAELSEAAVERYFTER 62 (201)
T ss_dssp CEEEETTTCCS---HHHHHHHHHC----CEEEEEEECHHHHHHHHHHH
T ss_pred CEEEEecCcCC---HHHHHHHHcC----CceEeecccHHHHHHHHHHh
Confidence 47999999887 3677999999 99999999998877775544
|
| >d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Thermotoga maritima [TaxId: 2336]
Probab=88.13 E-value=0.17 Score=36.64 Aligned_cols=37 Identities=22% Similarity=0.187 Sum_probs=29.5
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCch
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKD 40 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~ 40 (248)
|..+.|.||||-.|..+.+.|.++-. ..+..+..+..
T Consensus 1 MikVaIvGATGyvG~eLirlL~~HP~---~ei~~l~s~~~ 37 (176)
T d1vkna1 1 MIRAGIIGATGYTGLELVRLLKNHPE---AKITYLSSRTY 37 (176)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHCTT---EEEEEEECSTT
T ss_pred CeEEEEECCCcHHHHHHHHHHHhCCC---ceEEEeecccc
Confidence 77899999999999999999998663 66666654443
|
| >d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Nitrogenase iron protein species: Clostridium pasteurianum [TaxId: 1501]
Probab=88.09 E-value=0.21 Score=38.33 Aligned_cols=35 Identities=23% Similarity=0.436 Sum_probs=29.8
Q ss_pred CceEEEecCCCchhHH-----HHHHHHhCCCCCCceEEEeecCch
Q psy11190 1 MKSILITGCNRGLGLG-----MIKVLVGLGNNQPAHIFATCRNKD 40 (248)
Q Consensus 1 ~k~~lVtGas~giG~~-----ia~~l~~~g~~~~~~V~~~~r~~~ 40 (248)
||++.|+| -||.|+. +|..|+++| .+|.+++-+++
T Consensus 1 mr~Iai~g-KGGvGKTT~a~nLA~~LA~~G----~rVllID~D~q 40 (269)
T d1cp2a_ 1 MRQVAIYG-KGGIGKSTTTQNLTSGLHAMG----KTIMVVGCDPK 40 (269)
T ss_dssp CEEEEEEE-CTTSSHHHHHHHHHHHHHTTT----CCEEEEEECTT
T ss_pred CCEEEEEC-CCcCCHHHHHHHHHHHHHhCC----CcEEEEecCCC
Confidence 89999998 8888875 466999999 99999998764
|
| >d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=87.98 E-value=1.1 Score=31.08 Aligned_cols=34 Identities=18% Similarity=0.050 Sum_probs=25.9
Q ss_pred CCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHH
Q psy11190 9 CNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLA 47 (248)
Q Consensus 9 as~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~ 47 (248)
|.|-+|..+|+.|++.| ..| ...|+.++..++.+
T Consensus 7 GlG~MG~~ma~~L~~~g----~~~-~~~~~~~~~~~~~~ 40 (156)
T d2cvza2 7 GLGAMGYPMAGHLARRF----PTL-VWNRTFEKALRHQE 40 (156)
T ss_dssp CCSTTHHHHHHHHHTTS----CEE-EECSSTHHHHHHHH
T ss_pred eHHHHHHHHHHHHHhCC----CEE-EEeCCHHHHHHHHH
Confidence 56999999999999877 554 67777777665533
|
| >d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein TTHA1280, middle and C-terminal domains species: Thermus thermophilus [TaxId: 274]
Probab=87.79 E-value=1.1 Score=35.38 Aligned_cols=73 Identities=12% Similarity=0.114 Sum_probs=44.8
Q ss_pred EecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhc--CCceeEEeeccCCchhhhhHHHHhhhhhcCC
Q psy11190 6 ITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQH--SNLHVIELDVTDFSKQQDVLFKDISDVVKDQ 83 (248)
Q Consensus 6 VtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~v~~~~~~i~~~~~~~ 83 (248)
+..++|+++.++| ..+ .+|+.++.+...++.+.+-.... .++.++..|..+... .......
T Consensus 152 l~~gtG~~s~~~a----~g~----~~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~~d~~~~~~-------~~~~~~~-- 214 (318)
T d1wxxa2 152 VFSYAGGFALHLA----LGF----REVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLR-------RLEKEGE-- 214 (318)
T ss_dssp ETCTTTHHHHHHH----HHE----EEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHH-------HHHHTTC--
T ss_pred cCCCCcHHHHHHH----hcC----CcEEeecchHHHHHHHHHHHHHcCCCCcceeeccHHHHhh-------hhHhhhc--
Confidence 4445566665443 335 89999999998877774433322 367788777754321 2222212
Q ss_pred CccEEEeccccC
Q psy11190 84 GLNVLVNNAGIA 95 (248)
Q Consensus 84 ~iD~lv~~ag~~ 95 (248)
+.|.||++....
T Consensus 215 ~fD~Vi~DpP~~ 226 (318)
T d1wxxa2 215 RFDLVVLDPPAF 226 (318)
T ss_dssp CEEEEEECCCCS
T ss_pred CCCEEEEcCCcc
Confidence 599999997543
|
| >d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Cell division regulator MinD species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=87.74 E-value=0.24 Score=36.76 Aligned_cols=36 Identities=17% Similarity=0.252 Sum_probs=30.8
Q ss_pred CceEEEecCCCchhH-----HHHHHHHhCCCCCCceEEEeecCch
Q psy11190 1 MKSILITGCNRGLGL-----GMIKVLVGLGNNQPAHIFATCRNKD 40 (248)
Q Consensus 1 ~k~~lVtGas~giG~-----~ia~~l~~~g~~~~~~V~~~~r~~~ 40 (248)
||++.|+++-||.|+ .+|..|+++| .+|.+++-+..
T Consensus 1 ~kvIav~s~KGGvGKTtia~nlA~~la~~g----~~VlliD~D~~ 41 (232)
T d1hyqa_ 1 VRTITVASGKGGTGKTTITANLGVALAQLG----HDVTIVDADIT 41 (232)
T ss_dssp CEEEEEEESSSCSCHHHHHHHHHHHHHHTT----CCEEEEECCCS
T ss_pred CEEEEEECCCCCChHHHHHHHHHHHHHhCC----CCEEEEeCCCC
Confidence 899999999999987 4678899999 89999887643
|
| >d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Salmonella typhimurium [TaxId: 90371]
Probab=87.72 E-value=0.77 Score=32.89 Aligned_cols=32 Identities=22% Similarity=0.210 Sum_probs=26.6
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEe
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFAT 35 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~ 35 (248)
|..+.|.||||-.|+++.+.|..+-. ..+..+
T Consensus 1 MikVaIiGATGyvG~eLlrlL~~HP~---~ei~~l 32 (179)
T d2g17a1 1 MLNTLIVGASGYAGAELVSYVNRHPH---MTITAL 32 (179)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTT---EEEEEE
T ss_pred CcEEEEECcccHHHHHHHHHHHhCCC---CceEee
Confidence 78899999999999999999998752 555443
|
| >d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: p-Hydroxybenzoate hydroxylase, PHBH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=87.36 E-value=0.2 Score=38.62 Aligned_cols=35 Identities=26% Similarity=0.276 Sum_probs=30.3
Q ss_pred Cce-EEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCch
Q psy11190 1 MKS-ILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKD 40 (248)
Q Consensus 1 ~k~-~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~ 40 (248)
||+ |+|.||+ -.|..+|..|+++| ..|.++++.++
T Consensus 1 mk~~V~IvGaG-p~Gl~~A~~L~~~G----~~v~vlE~~~~ 36 (292)
T d1k0ia1 1 MKTQVAIIGAG-PSGLLLGQLLHKAG----IDNVILERQTP 36 (292)
T ss_dssp CBCSEEEECCS-HHHHHHHHHHHHHT----CCEEEECSSCH
T ss_pred CCCCEEEECcC-HHHHHHHHHHHHCC----CCEEEEeCCCC
Confidence 884 8888876 78999999999999 89999998764
|
| >d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.27 E-value=1.7 Score=32.23 Aligned_cols=75 Identities=11% Similarity=0.090 Sum_probs=52.6
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhh-------cCCceeEEeeccCCchhhhhHHHH
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQ-------HSNLHVIELDVTDFSKQQDVLFKD 75 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~~v~~~~~~ 75 (248)
++|-.|+++|--.++.-++.... .+|+.++++++-++...+.... ..++.+...|..+...
T Consensus 79 ~VLdiG~GsGy~ta~la~l~~~~----g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~~~~~~-------- 146 (224)
T d1i1na_ 79 KALDVGSGSGILTACFARMVGCT----GKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYA-------- 146 (224)
T ss_dssp EEEEETCTTSHHHHHHHHHHCTT----CEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCG--------
T ss_pred eEEEecCCCCHHHHHHHHHhCCC----ceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeecccccc--------
Confidence 78999999998888877787555 7999999998876665433321 2456777777654322
Q ss_pred hhhhhcCCCccEEEecccc
Q psy11190 76 ISDVVKDQGLNVLVNNAGI 94 (248)
Q Consensus 76 i~~~~~~~~iD~lv~~ag~ 94 (248)
.....|.++.+++.
T Consensus 147 -----~~~~fD~I~~~~~~ 160 (224)
T d1i1na_ 147 -----EEAPYDAIHVGAAA 160 (224)
T ss_dssp -----GGCCEEEEEECSBB
T ss_pred -----hhhhhhhhhhhcch
Confidence 11258999998865
|
| >d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: MraW-like putative methyltransferases domain: TM0872, methyltransferase domain species: Thermus thermophilus [TaxId: 274]
Probab=87.00 E-value=1 Score=32.53 Aligned_cols=75 Identities=8% Similarity=0.173 Sum_probs=49.1
Q ss_pred cCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhHHHHhhhhhcCCCccE
Q psy11190 8 GCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVLFKDISDVVKDQGLNV 87 (248)
Q Consensus 8 Gas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~~~~~iD~ 87 (248)
-||-|-|-+ .+.+++++ .+|+.++|+++.++..... ...++.++..+.++.++ .+.. ++..++|.
T Consensus 24 D~T~G~GGh-s~~iL~~~----~~viaiD~D~~ai~~a~~~--~~~~~~~~~~~f~~~~~----~l~~----~~~~~vdg 88 (182)
T d1wg8a2 24 DATLGGAGH-ARGILERG----GRVIGLDQDPEAVARAKGL--HLPGLTVVQGNFRHLKR----HLAA----LGVERVDG 88 (182)
T ss_dssp ETTCTTSHH-HHHHHHTT----CEEEEEESCHHHHHHHHHT--CCTTEEEEESCGGGHHH----HHHH----TTCSCEEE
T ss_pred EeCCCCcHH-HHHHhccc----CcEEEEhhhhhHHHHHhhc--cccceeEeehHHHHHHH----HHHH----cCCCccCE
Confidence 344444444 45566666 7999999999887665443 34578888888876443 2222 22235999
Q ss_pred EEeccccCCc
Q psy11190 88 LVNNAGIAAK 97 (248)
Q Consensus 88 lv~~ag~~~~ 97 (248)
++..-|++..
T Consensus 89 Il~DLGvSs~ 98 (182)
T d1wg8a2 89 ILADLGVSSF 98 (182)
T ss_dssp EEEECSCCHH
T ss_pred EEEEccCCHH
Confidence 9999998754
|
| >d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein SMu776, middle and C-terminal domains species: Streptococcus mutans [TaxId: 1309]
Probab=86.80 E-value=5.8 Score=30.92 Aligned_cols=76 Identities=14% Similarity=0.160 Sum_probs=44.3
Q ss_pred eEE-EecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHh-h---cCCceeEEeeccCCchhhhhHHHHhh
Q psy11190 3 SIL-ITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQ-Q---HSNLHVIELDVTDFSKQQDVLFKDIS 77 (248)
Q Consensus 3 ~~l-VtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~-~---~~~~~~~~~D~~~~~~~v~~~~~~i~ 77 (248)
++| +..++|+++.++ +..|+ ..|+.++.+...++...+-.. . ..++.++..|+.+. ++...
T Consensus 147 ~VLdlf~~~G~~sl~a----a~~ga---~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~~~~-------l~~~~ 212 (317)
T d2b78a2 147 TVLNLFSYTAAFSVAA----AMGGA---MATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDY-------FKYAR 212 (317)
T ss_dssp EEEEETCTTTHHHHHH----HHTTB---SEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHH-------HHHHH
T ss_pred ceeecCCCCcHHHHHH----HhCCC---ceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEccHHHH-------HHHHH
Confidence 344 455666666443 33463 589999999887776633222 1 13577888777432 22222
Q ss_pred hhhcCCCccEEEecccc
Q psy11190 78 DVVKDQGLNVLVNNAGI 94 (248)
Q Consensus 78 ~~~~~~~iD~lv~~ag~ 94 (248)
+... +.|+||+....
T Consensus 213 ~~~~--~fD~Ii~DPP~ 227 (317)
T d2b78a2 213 RHHL--TYDIIIIDPPS 227 (317)
T ss_dssp HTTC--CEEEEEECCCC
T ss_pred hhcC--CCCEEEEcChh
Confidence 2212 59999999653
|
| >d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Glycine oxidase ThiO species: Bacillus sp. [TaxId: 1409]
Probab=86.34 E-value=0.34 Score=36.83 Aligned_cols=34 Identities=15% Similarity=0.110 Sum_probs=28.4
Q ss_pred Cce---EEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCc
Q psy11190 1 MKS---ILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNK 39 (248)
Q Consensus 1 ~k~---~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~ 39 (248)
||+ ++|.| +|-.|.++|.+|+++| .+|++++++.
T Consensus 1 m~~~~DvvIIG-aGi~Gls~A~~La~~G----~~V~vlE~~~ 37 (276)
T d1ryia1 1 MKRHYEAVVIG-GGIIGSAIAYYLAKEN----KNTALFESGT 37 (276)
T ss_dssp CCSEEEEEEEC-CSHHHHHHHHHHHHTT----CCEEEECSSS
T ss_pred CCccCCEEEEC-cCHHHHHHHHHHHHCC----CcEEEEeCCC
Confidence 774 66665 5788999999999999 8999999864
|
| >d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=86.33 E-value=0.3 Score=38.62 Aligned_cols=37 Identities=22% Similarity=0.206 Sum_probs=27.3
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCch
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKD 40 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~ 40 (248)
||+++|.||+ --|..+|..|+++| .+..|+++.|+.+
T Consensus 4 ~KrVaIIGaG-~sGl~~A~~L~~~~--~~~~v~vfEk~~~ 40 (335)
T d2gv8a1 4 IRKIAIIGAG-PSGLVTAKALLAEK--AFDQVTLFERRGS 40 (335)
T ss_dssp CCEEEEECCS-HHHHHHHHHHHTTT--CCSEEEEECSSSS
T ss_pred CCeEEEECcC-HHHHHHHHHHHHhC--CCCCEEEEECCCC
Confidence 6888888764 44556788888877 2368999998854
|
| >d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=86.20 E-value=1.5 Score=31.44 Aligned_cols=35 Identities=17% Similarity=0.196 Sum_probs=29.0
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDK 41 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~ 41 (248)
|++.|.| .|.||+.+++.+...| ++|+..++...+
T Consensus 45 k~vgiiG-~G~IG~~va~~~~~fg----~~v~~~d~~~~~ 79 (184)
T d1ygya1 45 KTVGVVG-LGRIGQLVAQRIAAFG----AYVVAYDPYVSP 79 (184)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHTTT----CEEEEECTTSCH
T ss_pred eeeeecc-ccchhHHHHHHhhhcc----ceEEeecCCCCh
Confidence 4556655 7999999999999888 899999987654
|
| >d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: UDP-glucose dehydrogenase (UDPGDH) species: Streptococcus pyogenes [TaxId: 1314]
Probab=86.18 E-value=0.42 Score=34.73 Aligned_cols=38 Identities=18% Similarity=0.115 Sum_probs=30.8
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL 45 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~ 45 (248)
||.++| |.|-+|..+|..|+ +| +.|+..+-+++..+.+
T Consensus 1 MkI~Vi--GlG~vGl~~a~~~a-~g----~~V~g~Din~~~v~~l 38 (196)
T d1dlja2 1 MKIAVA--GSGYVGLSLGVLLS-LQ----NEVTIVDILPSKVDKI 38 (196)
T ss_dssp CEEEEE--CCSHHHHHHHHHHT-TT----SEEEEECSCHHHHHHH
T ss_pred CEEEEE--CCChhHHHHHHHHH-CC----CcEEEEECCHHHHHHH
Confidence 886666 58999999997665 68 9999999998776554
|
| >d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PH1109 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=85.86 E-value=0.57 Score=32.30 Aligned_cols=84 Identities=13% Similarity=0.118 Sum_probs=52.3
Q ss_pred ceEEEecCC---CchhHHHHHHHHhCCCCCCceEEEeecCchhHHHH---HHHHhhcCCceeEEeeccCCchhhhhHHHH
Q psy11190 2 KSILITGCN---RGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL---LALAQQHSNLHVIELDVTDFSKQQDVLFKD 75 (248)
Q Consensus 2 k~~lVtGas---~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~---~~~~~~~~~~~~~~~D~~~~~~~v~~~~~~ 75 (248)
|++.|.|+| +-.|..+.+.|.+.| +.|+.+....+...-. ..+..-...+.. +++.-..+.+..++++
T Consensus 20 ksIAVVGaS~~~~~~g~~v~~~L~~~g----~~v~pVnP~~~~i~G~~~~~sl~dlp~~iD~--v~i~vp~~~~~~~~~e 93 (139)
T d2d59a1 20 KKIALVGASPKPERDANIVMKYLLEHG----YDVYPVNPKYEEVLGRKCYPSVLDIPDKIEV--VDLFVKPKLTMEYVEQ 93 (139)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHTT----CEEEEECTTCSEETTEECBSSGGGCSSCCSE--EEECSCHHHHHHHHHH
T ss_pred CeEEEEeecCCCCCchHHHHHHHHHCC----CEEEEECCcccccCCCcccccccccCccceE--EEEEeCHHHHHHHHHH
Confidence 789999999 679999999999999 8999987765432211 011111112222 3333333336677777
Q ss_pred hhhhhcCCCccEEEeccccC
Q psy11190 76 ISDVVKDQGLNVLVNNAGIA 95 (248)
Q Consensus 76 i~~~~~~~~iD~lv~~ag~~ 95 (248)
+.+. ++..++...|..
T Consensus 94 ~~~~----g~k~v~~~~G~~ 109 (139)
T d2d59a1 94 AIKK----GAKVVWFQYNTY 109 (139)
T ss_dssp HHHH----TCSEEEECTTCC
T ss_pred HHHh----CCCEEEEecccc
Confidence 6654 377888777754
|
| >d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: TehB-like domain: Putative methyltransferase TehB species: Salmonella typhimurium [TaxId: 90371]
Probab=85.86 E-value=2.3 Score=30.39 Aligned_cols=70 Identities=19% Similarity=0.221 Sum_probs=46.6
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhc--CCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQH--SNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
++|=.|++.|. .+..|+++| ++|+.++.+++.++.+.+..... +++.+...|+.+...
T Consensus 33 rvLDiGcG~G~---~~~~la~~g----~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~~~~~------------- 92 (198)
T d2i6ga1 33 RTLDLGCGNGR---NSLYLAANG----YDVTAWDKNPASMANLERIKAAEGLDNLQTDLVDLNTLTF------------- 92 (198)
T ss_dssp EEEEETCTTSH---HHHHHHHTT----CEEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCTTTCCC-------------
T ss_pred cEEEECCCCCH---HHHHHHHHh----hhhccccCcHHHHHHHHHHhhhccccchhhhheecccccc-------------
Confidence 57777886443 467888999 89999999988877664443322 345666666654332
Q ss_pred cCCCccEEEeccc
Q psy11190 81 KDQGLNVLVNNAG 93 (248)
Q Consensus 81 ~~~~iD~lv~~ag 93 (248)
+...|+|+++.-
T Consensus 93 -~~~fD~I~~~~~ 104 (198)
T d2i6ga1 93 -DGEYDFILSTVV 104 (198)
T ss_dssp -CCCEEEEEEESC
T ss_pred -cccccEEEEeee
Confidence 114899987653
|
| >d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Arginine methyltransferase, HMT1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=85.81 E-value=1.7 Score=34.13 Aligned_cols=71 Identities=13% Similarity=0.224 Sum_probs=45.7
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHh---hcCCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQ---QHSNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
|++|-.|++.|+ ++..++++|+ .+|+.++.++ .++.+.+... ...++.++..|+.+..-
T Consensus 40 ~~VLDlGcGtG~---ls~~aa~~Ga---~~V~avd~s~-~~~~a~~~~~~~~~~~~i~~i~~~~~~l~~----------- 101 (328)
T d1g6q1_ 40 KIVLDVGCGTGI---LSMFAAKHGA---KHVIGVDMSS-IIEMAKELVELNGFSDKITLLRGKLEDVHL----------- 101 (328)
T ss_dssp CEEEEETCTTSH---HHHHHHHTCC---SEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCC-----------
T ss_pred CEEEEeCCCCCH---HHHHHHHhCC---CEEEEEeCCH-HHHHHHHHHHHhCccccceEEEeehhhccC-----------
Confidence 578999998875 4556677785 6899998774 3333333222 23467888888876542
Q ss_pred hhcCCCccEEEecc
Q psy11190 79 VVKDQGLNVLVNNA 92 (248)
Q Consensus 79 ~~~~~~iD~lv~~a 92 (248)
...+.|+++...
T Consensus 102 --~~~~~D~i~se~ 113 (328)
T d1g6q1_ 102 --PFPKVDIIISEW 113 (328)
T ss_dssp --SSSCEEEEEECC
T ss_pred --cccceeEEEEEe
Confidence 112478887754
|
| >d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=85.57 E-value=0.49 Score=31.83 Aligned_cols=33 Identities=21% Similarity=0.310 Sum_probs=28.4
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNK 39 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~ 39 (248)
|.++|.|| |-||.++|..|.+.| ..|.++.|.+
T Consensus 23 k~vvIvGg-G~iG~E~A~~l~~~G----~~Vtlv~~~~ 55 (125)
T d3grsa2 23 GRSVIVGA-GYIAVEMAGILSALG----SKTSLMIRHD 55 (125)
T ss_dssp SEEEEECC-SHHHHHHHHHHHHTT----CEEEEECSSS
T ss_pred CEEEEEcC-CccHHHHHHHHhcCC----cEEEEEeecc
Confidence 56777766 579999999999999 8999999975
|
| >d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=85.50 E-value=0.59 Score=31.28 Aligned_cols=34 Identities=26% Similarity=0.309 Sum_probs=28.1
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCch
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKD 40 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~ 40 (248)
|.++|.| +|-||.++|..|++.| ..|.++.+.+.
T Consensus 24 ~~~vIiG-~G~ig~E~A~~l~~lG----~~Vtii~~~~~ 57 (122)
T d1v59a2 24 KRLTIIG-GGIIGLEMGSVYSRLG----SKVTVVEFQPQ 57 (122)
T ss_dssp SEEEEEC-CSHHHHHHHHHHHHTT----CEEEEECSSSS
T ss_pred CeEEEEC-CCchHHHHHHHHHhhC----cceeEEEeccc
Confidence 4566665 5789999999999999 99999988653
|
| >d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ribosomal protein L11 methyltransferase PrmA domain: PrmA-like protein TTHA0656 (TT0836) species: Thermus thermophilus [TaxId: 274]
Probab=85.35 E-value=1.5 Score=33.28 Aligned_cols=69 Identities=16% Similarity=0.095 Sum_probs=44.8
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHh-hcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQ-QHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
+++|=.|+++|+- +..+++.| ++|+.++.+++..+.+.+-.. .+-+..++..|+.+. .
T Consensus 122 ~~VLDiGcGsG~l---~i~aa~~g----~~V~gvDis~~av~~A~~na~~n~~~~~~~~~d~~~~----------~---- 180 (254)
T d2nxca1 122 DKVLDLGTGSGVL---AIAAEKLG----GKALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAA----------L---- 180 (254)
T ss_dssp CEEEEETCTTSHH---HHHHHHTT----CEEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHH----------G----
T ss_pred CEEEEcccchhHH---HHHHHhcC----CEEEEEECChHHHHHHHHHHHHcCCceeEEecccccc----------c----
Confidence 4677789988863 34566678 899999999998877744332 233555665554321 1
Q ss_pred cCCCccEEEec
Q psy11190 81 KDQGLNVLVNN 91 (248)
Q Consensus 81 ~~~~iD~lv~~ 91 (248)
...+.|+++.|
T Consensus 181 ~~~~fD~V~an 191 (254)
T d2nxca1 181 PFGPFDLLVAN 191 (254)
T ss_dssp GGCCEEEEEEE
T ss_pred cccccchhhhc
Confidence 11258999887
|
| >d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein PH1915, middle and C-terminal domains species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=85.31 E-value=4.7 Score=31.49 Aligned_cols=113 Identities=11% Similarity=0.106 Sum_probs=61.7
Q ss_pred eEEEec-CCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhh---cCCceeEEeeccCCchhhhhHHHHhhh
Q psy11190 3 SILITG-CNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQ---HSNLHVIELDVTDFSKQQDVLFKDISD 78 (248)
Q Consensus 3 ~~lVtG-as~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~v~~~~~~i~~ 78 (248)
++|=.+ ++|+++.++ +..|+ .+|+.++.+++.++...+-... ..++.++..|+.+. ......
T Consensus 148 ~VLDl~~g~G~~si~~----a~~ga---~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d~~~~-------~~~~~~ 213 (324)
T d2as0a2 148 RVLDVFTYTGGFAIHA----AIAGA---DEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEE-------MEKLQK 213 (324)
T ss_dssp EEEETTCTTTHHHHHH----HHTTC---SEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHH-------HHHHHH
T ss_pred eeecccCcccchhhhh----hhcCC---cEEEeecCCHHHHHHHHHHHHHcCCCccceeeechhhhh-------hHHHHh
Confidence 344333 445555543 34564 6899999999887766332222 23567777776432 122222
Q ss_pred hhcCCCccEEEeccccCCccccCCCCChhhhhheeeecchhhHHHHHHHhHHHHhhhhcccCCCCCCCCceEEEeec
Q psy11190 79 VVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMTDHFLVNVTAPLMLTKTMLPLLKKASEANSAAPLGSSRAAIVNVSS 155 (248)
Q Consensus 79 ~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~iv~vss 155 (248)
.. .+.|+||++...... +....... ......+...++++++ ++|.+++.|.
T Consensus 214 ~~--~~fD~Vi~DpP~~~~-------~~~~~~~~----~~~y~~l~~~a~~ll~-------------pGG~lv~~s~ 264 (324)
T d2as0a2 214 KG--EKFDIVVLDPPAFVQ-------HEKDLKAG----LRAYFNVNFAGLNLVK-------------DGGILVTCSC 264 (324)
T ss_dssp TT--CCEEEEEECCCCSCS-------SGGGHHHH----HHHHHHHHHHHHTTEE-------------EEEEEEEEEC
T ss_pred cc--CCCCchhcCCccccC-------CHHHHHHH----HHHHHHHHHHHHHHcC-------------CCcEEEEEeC
Confidence 21 259999999764432 22222221 2234446666666664 4677777664
|
| >d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein BH2331 species: Bacillus halodurans [TaxId: 86665]
Probab=85.15 E-value=2.5 Score=30.78 Aligned_cols=72 Identities=11% Similarity=0.122 Sum_probs=49.4
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHh--hcCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQ--QHSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
++|=.|++.|.- +..|+++| .+|+.++-+++-++.+.+... ..+++.++..|..+..-
T Consensus 18 rVLDiGcG~G~~---~~~l~~~~----~~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~~~l~~------------- 77 (231)
T d1vl5a_ 18 EVLDVATGGGHV---ANAFAPFV----KKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPF------------- 77 (231)
T ss_dssp EEEEETCTTCHH---HHHHGGGS----SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCS-------------
T ss_pred EEEEecccCcHH---HHHHHHhC----CEEEEEECCHHHHhhhhhcccccccccccccccccccccc-------------
Confidence 577788887753 46788888 899999999887766644332 23578888888876432
Q ss_pred cCCCccEEEecccc
Q psy11190 81 KDQGLNVLVNNAGI 94 (248)
Q Consensus 81 ~~~~iD~lv~~ag~ 94 (248)
.++..|+++++...
T Consensus 78 ~~~~fD~v~~~~~l 91 (231)
T d1vl5a_ 78 TDERFHIVTCRIAA 91 (231)
T ss_dssp CTTCEEEEEEESCG
T ss_pred cccccccccccccc
Confidence 11248999888654
|
| >d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Zymomonas mobilis [TaxId: 542]
Probab=85.03 E-value=1.2 Score=31.04 Aligned_cols=46 Identities=13% Similarity=0.237 Sum_probs=32.4
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHH
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALA 49 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~ 49 (248)
||++.|.|+||-||.....-+.+.- ..++|+.+.=+. ..+.+.++.
T Consensus 2 pK~I~IlGsTGSIG~~tL~Vi~~~~--d~f~v~~lsa~~-N~~~L~~q~ 47 (150)
T d1r0ka2 2 PRTVTVLGATGSIGHSTLDLIERNL--DRYQVIALTANR-NVKDLADAA 47 (150)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTG--GGEEEEEEEESS-CHHHHHHHH
T ss_pred CcEEEEECCCcHHHHHHHHHHHcCC--CCcEEEEEEeCC-CHHHHHHHH
Confidence 6899999999999999888887653 237888765543 334444333
|
| >d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, C-terminal domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=84.99 E-value=0.77 Score=31.83 Aligned_cols=34 Identities=9% Similarity=0.029 Sum_probs=28.1
Q ss_pred eEEEe-cCCCchhHHHHHHHHhCCCCCCceEEEeecCch
Q psy11190 3 SILIT-GCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKD 40 (248)
Q Consensus 3 ~~lVt-Gas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~ 40 (248)
.++|. .+++-||.++|..|+++| +.|.++.+...
T Consensus 41 ~vvi~d~ggg~ig~e~A~~la~~G----~~Vtlv~~~~~ 75 (156)
T d1djqa2 41 RVVILNADTYFMAPSLAEKLATAG----HEVTIVSGVHL 75 (156)
T ss_dssp EEEEEECCCSSHHHHHHHHHHHTT----CEEEEEESSCT
T ss_pred ceEEEecCCChHHHHHHHHHHHcC----CeEEEEecCCc
Confidence 34444 466899999999999999 99999998754
|
| >d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=84.89 E-value=3.9 Score=30.14 Aligned_cols=80 Identities=15% Similarity=0.079 Sum_probs=52.4
Q ss_pred eEEEecCCCchhHHHHHHHH-hCCCCCCceEEEeecCchhHHHHHHHH-------hhcCCceeEEeeccCCchhhhhHHH
Q psy11190 3 SILITGCNRGLGLGMIKVLV-GLGNNQPAHIFATCRNKDKAVELLALA-------QQHSNLHVIELDVTDFSKQQDVLFK 74 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~-~~g~~~~~~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~~~D~~~~~~~v~~~~~ 74 (248)
++|..|+++|--.++.-+++ ..|.+.+.+|+.++++++-.+...+.. ....++.++..|..+...
T Consensus 83 ~VLeIGtGsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~d~~~~~~------- 155 (223)
T d1r18a_ 83 RILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYP------- 155 (223)
T ss_dssp EEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCG-------
T ss_pred eEEEecCCCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEecccccccc-------
Confidence 68999999998777776665 344333368999999887555442211 123478888888765322
Q ss_pred HhhhhhcCCCccEEEeccccC
Q psy11190 75 DISDVVKDQGLNVLVNNAGIA 95 (248)
Q Consensus 75 ~i~~~~~~~~iD~lv~~ag~~ 95 (248)
+ ..+.|.++.+++..
T Consensus 156 ---~---~~~fD~Iiv~~a~~ 170 (223)
T d1r18a_ 156 ---P---NAPYNAIHVGAAAP 170 (223)
T ss_dssp ---G---GCSEEEEEECSCBS
T ss_pred ---c---ccceeeEEEEeech
Confidence 1 12589999988753
|
| >d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Rhodotorula gracilis [TaxId: 5286]
Probab=84.56 E-value=0.52 Score=35.03 Aligned_cols=33 Identities=21% Similarity=0.366 Sum_probs=26.8
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNK 39 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~ 39 (248)
|.|+|.|| |-.|..+|..|+++| ..|.+++|+.
T Consensus 7 ~kVvVIGa-GiaGl~~A~~L~~~G----~~V~vier~~ 39 (268)
T d1c0pa1 7 KRVVVLGS-GVIGLSSALILARKG----YSVHILARDL 39 (268)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTT----CEEEEEESSC
T ss_pred CcEEEECc-cHHHHHHHHHHHHCC----CCEEEEeCCC
Confidence 34666654 677999999999999 8999999864
|
| >d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide transformylase PurT, N-domain species: Escherichia coli [TaxId: 562]
Probab=83.90 E-value=2 Score=28.12 Aligned_cols=57 Identities=18% Similarity=0.204 Sum_probs=40.8
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhhcCCceeEEeeccCCchhhhhH
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQHSNLHVIELDVTDFSKQQDVL 72 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~v~~~ 72 (248)
++.|.| +|=+|+-++....+.| .+|++.+.+++..-. .-.-.++..|..|.+. +..+
T Consensus 13 kigIlG-gGQL~rMla~aA~~lG----~~v~v~d~~~~~PA~-------~va~~~i~~~~~d~~~-l~~~ 69 (111)
T d1kjqa2 13 RVMLLG-SGELGKEVAIECQRLG----VEVIAVDRYADAPAM-------HVAHRSHVINMLDGDA-LRRV 69 (111)
T ss_dssp EEEEES-CSHHHHHHHHHHHTTT----CEEEEEESSTTCGGG-------GGSSEEEECCTTCHHH-HHHH
T ss_pred EEEEEe-CCHHHHHHHHHHHHCC----CEEEEEcCCCCCchh-------hcCCeEEECCCCCHHH-HHHH
Confidence 577777 5679999999999999 999999988764111 1122466788888766 5444
|
| >d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=83.78 E-value=0.85 Score=30.45 Aligned_cols=34 Identities=6% Similarity=0.128 Sum_probs=27.9
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCch
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKD 40 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~ 40 (248)
|.++|. |+|.+|.++|..|++.| ..|.++.+...
T Consensus 31 k~vvVi-GgG~iG~E~A~~l~~~g----~~Vtlie~~~~ 64 (123)
T d1nhpa2 31 NNVVVI-GSGYIGIEAAEAFAKAG----KKVTVIDILDR 64 (123)
T ss_dssp CEEEEE-CCSHHHHHHHHHHHHTT----CEEEEEESSSS
T ss_pred CEEEEE-CChHHHHHHHHHhhccc----eEEEEEEecCc
Confidence 455555 56799999999999999 89999988653
|
| >d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 2 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=83.72 E-value=0.61 Score=33.27 Aligned_cols=34 Identities=18% Similarity=0.179 Sum_probs=26.1
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCc-eEEEeecCch
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPA-HIFATCRNKD 40 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~-~V~~~~r~~~ 40 (248)
|+++|.| +|-.|...|..|+++| + .|.++.++..
T Consensus 5 ~kVaIIG-aGpaGl~aA~~l~~~G----~~~V~v~E~~~~ 39 (196)
T d1gtea4 5 AKIALLG-AGPASISCASFLARLG----YSDITIFEKQEY 39 (196)
T ss_dssp CCEEEEC-CSHHHHHHHHHHHHTT----CCCEEEEESSSS
T ss_pred CEEEEEC-ChHHHHHHHHHHHHCC----CCeEEEEEecCc
Confidence 4455554 5788999999999999 6 4889888653
|
| >d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Molybdenum cofactor biosynthesis protein MoeB domain: Molybdenum cofactor biosynthesis protein MoeB species: Escherichia coli [TaxId: 562]
Probab=83.49 E-value=0.54 Score=35.53 Aligned_cols=35 Identities=23% Similarity=0.270 Sum_probs=29.2
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCch
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKD 40 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~ 40 (248)
++++|.| .||+|..++..|+..|. -++.++|.+.=
T Consensus 31 ~~VliiG-~GglGs~va~~La~~Gv---g~i~lvD~D~V 65 (247)
T d1jw9b_ 31 SRVLIVG-LGGLGCAASQYLASAGV---GNLTLLDFDTV 65 (247)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHTC---SEEEEECCCBC
T ss_pred CCEEEEC-CCHHHHHHHHHHHHcCC---CeEEEECCccc
Confidence 4688887 78899999999999995 68888887643
|
| >d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Escherichia coli [TaxId: 562]
Probab=83.45 E-value=1.1 Score=31.90 Aligned_cols=38 Identities=18% Similarity=0.135 Sum_probs=32.5
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAV 43 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~ 43 (248)
|+++|.|.|.-.|+-++..|.++| +.|+++.+....+.
T Consensus 38 K~v~VIGrS~~VG~Pla~lL~~~g----atVt~~h~~t~~l~ 75 (166)
T d1b0aa1 38 LNAVVIGASNIVGRPMSMELLLAG----CTTTVTHRFTKNLR 75 (166)
T ss_dssp CEEEEECCCTTTHHHHHHHHHTTT----CEEEEECSSCSCHH
T ss_pred ceEEEEeccccccHHHHHHHHHhh----ccccccccccchhH
Confidence 789999999999999999999999 88988877665543
|
| >d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: UBA3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=83.21 E-value=0.76 Score=37.95 Aligned_cols=33 Identities=27% Similarity=0.403 Sum_probs=27.5
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCc
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNK 39 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~ 39 (248)
.+||.|+ ||+|.++++.|+..|. .++.+++.+.
T Consensus 39 kVlvvG~-GglG~ei~k~L~~~Gv---g~i~lvD~D~ 71 (426)
T d1yovb1 39 KVLVIGA-GGLGCELLKNLALSGF---RQIHVIDMDT 71 (426)
T ss_dssp CEEEECS-STTHHHHHHHHHTTTC---CCEEEECCCB
T ss_pred eEEEECC-CHHHHHHHHHHHHcCC---CeEEEEECCC
Confidence 4788877 7799999999999995 5888888754
|
| >d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Plasmodium falciparum [TaxId: 5833]
Probab=82.86 E-value=0.76 Score=30.46 Aligned_cols=33 Identities=27% Similarity=0.422 Sum_probs=27.4
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNK 39 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~ 39 (248)
|+++|.| +|-+|.++|..|++.| .+|.++.|..
T Consensus 23 ~~v~IiG-gG~iG~E~A~~l~~~g----~~Vtlv~~~~ 55 (117)
T d1onfa2 23 KKIGIVG-SGYIAVELINVIKRLG----IDSYIFARGN 55 (117)
T ss_dssp SEEEEEC-CSHHHHHHHHHHHTTT----CEEEEECSSS
T ss_pred CEEEEEC-CchHHHHHHHHHHhcc----ccceeeehhc
Confidence 4556655 5789999999999999 9999999864
|
| >d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=82.85 E-value=1.1 Score=31.91 Aligned_cols=38 Identities=13% Similarity=0.160 Sum_probs=33.4
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHH
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAV 43 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~ 43 (248)
|.++|.|.|.-.|+-++..|+++| +.|.++.+....+.
T Consensus 40 k~vvVIGrS~iVGrPLa~lL~~~g----atVt~~~~~t~~l~ 77 (170)
T d1a4ia1 40 RHAVVVGRSKIVGAPMHDLLLWNN----ATVTTCHSKTAHLD 77 (170)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHTT----CEEEEECTTCSSHH
T ss_pred ceEEEEecCCccchHHHHHHHhcc----CceEEEecccccHH
Confidence 789999999999999999999999 89999888766544
|
| >d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Probable oxidoreductase At4g09670 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=82.83 E-value=2.4 Score=30.04 Aligned_cols=40 Identities=20% Similarity=0.185 Sum_probs=27.6
Q ss_pred EEEecCCCchhHHHHHHHHhCCCCCCceEE-EeecCchhHHHHHH
Q psy11190 4 ILITGCNRGLGLGMIKVLVGLGNNQPAHIF-ATCRNKDKAVELLA 47 (248)
Q Consensus 4 ~lVtGas~giG~~ia~~l~~~g~~~~~~V~-~~~r~~~~~~~~~~ 47 (248)
+.|.| .|.+|+..++.|..... ..|+ +++++.++++++.+
T Consensus 4 i~iIG-~G~~g~~~~~~l~~~~~---~~i~ai~d~~~~~~~~~~~ 44 (184)
T d1ydwa1 4 IGVMG-CADIARKVSRAIHLAPN---ATISGVASRSLEKAKAFAT 44 (184)
T ss_dssp EEEES-CCTTHHHHHHHHHHCTT---EEEEEEECSSHHHHHHHHH
T ss_pred EEEEc-CCHHHHHHHHHHHhCCC---CEEEEEEeCCccccccchh
Confidence 45556 46899999998876541 6666 56888777666543
|
| >d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Dihydroxypyridine hydroxylase DhpH species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=82.78 E-value=0.61 Score=34.88 Aligned_cols=33 Identities=21% Similarity=0.191 Sum_probs=25.7
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCch
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKD 40 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~ 40 (248)
+++|.|| |--|..+|..|+++| ..|++++++.+
T Consensus 6 kV~IiGa-G~aGl~~A~~L~~~G----~~v~v~Er~~~ 38 (265)
T d2voua1 6 RIAVVGG-SISGLTAALMLRDAG----VDVDVYERSPQ 38 (265)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTT----CEEEEECSSSS
T ss_pred cEEEECc-CHHHHHHHHHHHHCC----CCEEEEeCCCC
Confidence 4555554 566888889999999 99999998654
|
| >d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=82.71 E-value=0.83 Score=30.07 Aligned_cols=34 Identities=15% Similarity=0.303 Sum_probs=28.3
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCch
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKD 40 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~ 40 (248)
|.++|.| +|-+|.++|..|.+.| ..|.++.|.+.
T Consensus 23 ~~v~IiG-gG~ig~E~A~~l~~~G----~~Vtlve~~~~ 56 (117)
T d1ebda2 23 KSLVVIG-GGYIGIELGTAYANFG----TKVTILEGAGE 56 (117)
T ss_dssp SEEEEEC-CSHHHHHHHHHHHHTT----CEEEEEESSSS
T ss_pred CeEEEEC-CCccceeeeeeecccc----cEEEEEEecce
Confidence 4566665 5789999999999999 89999988764
|
| >d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Formate dehydrogenase species: Pseudomonas sp., strain 101 [TaxId: 306]
Probab=82.26 E-value=2.7 Score=30.09 Aligned_cols=35 Identities=17% Similarity=0.270 Sum_probs=27.9
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDK 41 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~ 41 (248)
+++.|. |.|.||+++++.|...| .+|+..++....
T Consensus 45 ~~vgii-G~G~IG~~va~~l~~fg----~~v~~~d~~~~~ 79 (188)
T d2naca1 45 MHVGTV-AAGRIGLAVLRRLAPFD----VHLHYTDRHRLP 79 (188)
T ss_dssp CEEEEE-CCSHHHHHHHHHHGGGT----CEEEEECSSCCC
T ss_pred cceeec-cccccchhhhhhhhccC----ceEEEEeecccc
Confidence 345555 47889999999999888 899999986543
|
| >d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Dethiobiotin synthetase species: Escherichia coli [TaxId: 562]
Probab=82.19 E-value=0.51 Score=34.34 Aligned_cols=32 Identities=16% Similarity=0.258 Sum_probs=27.8
Q ss_pred ceEEEecCCCchhH-----HHHHHHHhCCCCCCceEEEeec
Q psy11190 2 KSILITGCNRGLGL-----GMIKVLVGLGNNQPAHIFATCR 37 (248)
Q Consensus 2 k~~lVtGas~giG~-----~ia~~l~~~g~~~~~~V~~~~r 37 (248)
|+++|||-++|.|+ .+|+.|+++| .+|.+++-
T Consensus 2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G----~rVl~id~ 38 (224)
T d1byia_ 2 KRYFVTGTDTEVGKTVASCALLQAAKAAG----YRTAGYKP 38 (224)
T ss_dssp EEEEEEESSTTSCHHHHHHHHHHHHHHTT----CCEEEECS
T ss_pred ceEEEEECCCCccHHHHHHHHHHHHHHCC----CeEEEECc
Confidence 78999999999987 5789999999 89999863
|
| >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Peptidoglycan biosynthesis glycosyltransferase MurG domain: Peptidoglycan biosynthesis glycosyltransferase MurG species: Escherichia coli [TaxId: 562]
Probab=81.97 E-value=0.75 Score=35.79 Aligned_cols=33 Identities=18% Similarity=0.289 Sum_probs=23.1
Q ss_pred ceEEEecCCCch---hHHHHHHHHhCCCCCCceEEEeecC
Q psy11190 2 KSILITGCNRGL---GLGMIKVLVGLGNNQPAHIFATCRN 38 (248)
Q Consensus 2 k~~lVtGas~gi---G~~ia~~l~~~g~~~~~~V~~~~r~ 38 (248)
|..+.||||||- ..+++++|.++| +.|..++..
T Consensus 2 kili~~~GtGGHv~~a~al~~~L~~~G----~eV~~i~~~ 37 (351)
T d1f0ka_ 2 RLMVMAGGTGGHVFPGLAVAHHLMAQG----WQVRWLGTA 37 (351)
T ss_dssp EEEEECCSSHHHHHHHHHHHHHHHTTT----CEEEEEECT
T ss_pred EEEEEcCCcHHHHHHHHHHHHHHHhCC----CEEEEEEeC
Confidence 444445454444 567999999999 899887654
|
| >d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein YcgJ species: Bacillus subtilis [TaxId: 1423]
Probab=81.64 E-value=3.3 Score=30.32 Aligned_cols=71 Identities=11% Similarity=0.112 Sum_probs=49.1
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhh--cCCceeEEeeccCCchhhhhHHHHhhhhh
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQ--HSNLHVIELDVTDFSKQQDVLFKDISDVV 80 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~v~~~~~~i~~~~ 80 (248)
++|=.|++.|. ++..|++++ .+|+.++.+.+-++...+.... ..++.+++.|+.+..-
T Consensus 19 rILDiGcGtG~---~~~~la~~~----~~v~gvD~S~~~l~~A~~~~~~~~~~~~~~~~~d~~~~~~------------- 78 (234)
T d1xxla_ 19 RVLDIGAGAGH---TALAFSPYV----QECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPF------------- 78 (234)
T ss_dssp EEEEESCTTSH---HHHHHGGGS----SEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCS-------------
T ss_pred EEEEeCCcCcH---HHHHHHHhC----CeEEEEeCChhhhhhhhhhhcccccccccccccccccccc-------------
Confidence 57778888875 456777778 8999999998877666444332 2468888888866432
Q ss_pred cCCCccEEEeccc
Q psy11190 81 KDQGLNVLVNNAG 93 (248)
Q Consensus 81 ~~~~iD~lv~~ag 93 (248)
+++.+|+++++-.
T Consensus 79 ~~~~fD~v~~~~~ 91 (234)
T d1xxla_ 79 PDDSFDIITCRYA 91 (234)
T ss_dssp CTTCEEEEEEESC
T ss_pred cccccceeeeece
Confidence 1225898888654
|
| >d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=81.26 E-value=0.75 Score=34.65 Aligned_cols=33 Identities=18% Similarity=0.117 Sum_probs=26.3
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCc
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNK 39 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~ 39 (248)
|+|+|.|| |--|...|.+|+++| ..|.++.++.
T Consensus 2 KkV~IIGa-G~aGL~aA~~La~~G----~~V~vlE~~~ 34 (373)
T d1seza1 2 KRVAVIGA-GVSGLAAAYKLKIHG----LNVTVFEAEG 34 (373)
T ss_dssp CEEEEECC-SHHHHHHHHHHHTTS----CEEEEECSSS
T ss_pred CEEEEECc-CHHHHHHHHHHHhCC----CCEEEEeCCC
Confidence 56677654 556788999999999 8999998764
|
| >d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Azotobacter vinelandii [TaxId: 354]
Probab=80.84 E-value=1.1 Score=29.74 Aligned_cols=34 Identities=21% Similarity=0.227 Sum_probs=28.1
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCch
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKD 40 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~ 40 (248)
|.++|.| +|-||.++|..|++.| ..|.++.+...
T Consensus 23 ~~i~IiG-~G~ig~E~A~~l~~~G----~~Vtiv~~~~~ 56 (119)
T d3lada2 23 GKLGVIG-AGVIGLELGSVWARLG----AEVTVLEAMDK 56 (119)
T ss_dssp SEEEEEC-CSHHHHHHHHHHHHTT----CEEEEEESSSS
T ss_pred CeEEEEC-CChHHHHHHHHHHHcC----CceEEEEeecc
Confidence 4566665 5799999999999999 89999988753
|
| >d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative semialdehyde dehydrogenase species: Rice (Oryza sativa) [TaxId: 4530]
Probab=80.63 E-value=1.4 Score=31.69 Aligned_cols=35 Identities=14% Similarity=0.243 Sum_probs=27.5
Q ss_pred eEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCch
Q psy11190 3 SILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKD 40 (248)
Q Consensus 3 ~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~ 40 (248)
++.|.||||-.|+++.+.|.++-. ..+..+..+..
T Consensus 7 kVaIlGATGyvG~elirLL~~HP~---~ei~~l~S~~~ 41 (183)
T d2cvoa1 7 RIAVLGASGYTGAEIVRLLANHPQ---FRIKVMTADRK 41 (183)
T ss_dssp EEEEESCSSHHHHHHHHHHTTCSS---EEEEEEECSTT
T ss_pred EEEEECcccHHHHHHHHHHHhCCC---ceEEEEecccc
Confidence 588999999999999999998763 66666654433
|
| >d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: 2,4-dienoyl-CoA reductase, middle domain species: Escherichia coli [TaxId: 562]
Probab=80.55 E-value=1 Score=32.41 Aligned_cols=34 Identities=15% Similarity=0.214 Sum_probs=28.2
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCch
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKD 40 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~ 40 (248)
|.++|.|| |-.|.+.|..|+++| +.|.+++++..
T Consensus 44 k~V~IIGa-GPAGL~AA~~la~~G----~~Vtl~E~~~~ 77 (179)
T d1ps9a3 44 KNLAVVGA-GPAGLAFAINAAARG----HQVTLFDAHSE 77 (179)
T ss_dssp CEEEEECC-SHHHHHHHHHHHTTT----CEEEEEESSSS
T ss_pred cEEEEECc-cHHHHHHHHHHHhhc----cceEEEeccCc
Confidence 55666664 677899999999999 99999999754
|
| >d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: GDI-like N domain domain: Guanine nucleotide dissociation inhibitor, GDI species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=80.51 E-value=0.76 Score=33.44 Aligned_cols=31 Identities=10% Similarity=0.108 Sum_probs=26.2
Q ss_pred EEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCc
Q psy11190 4 ILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNK 39 (248)
Q Consensus 4 ~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~ 39 (248)
++|.| +|--|..+|..|+++| .+|.++.++.
T Consensus 8 viViG-aG~~Gl~~A~~La~~G----~~V~vlE~~~ 38 (297)
T d2bcgg1 8 VIVLG-TGITECILSGLLSVDG----KKVLHIDKQD 38 (297)
T ss_dssp EEEEC-CSHHHHHHHHHHHHTT----CCEEEECSSS
T ss_pred EEEEC-cCHHHHHHHHHHHHCC----CCEEEEcCCC
Confidence 56666 6677999999999999 8999999875
|
| >d1t35a_ c.129.1.1 (A:) Hypothetical protein YvdD {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MCP/YpsA-like superfamily: MCP/YpsA-like family: MoCo carrier protein-like domain: Hypothetical protein YvdD species: Bacillus subtilis [TaxId: 1423]
Probab=80.38 E-value=6.8 Score=27.66 Aligned_cols=119 Identities=9% Similarity=-0.032 Sum_probs=63.6
Q ss_pred CceEEEecCCCc--------hhHHHHHHHHhCCCCCCceEEEeecCchhHHHH-HHHHhhcCCceeEEeeccCCch----
Q psy11190 1 MKSILITGCNRG--------LGLGMIKVLVGLGNNQPAHIFATCRNKDKAVEL-LALAQQHSNLHVIELDVTDFSK---- 67 (248)
Q Consensus 1 ~k~~lVtGas~g--------iG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~---- 67 (248)
||++.|.|+++. ....+++.|+++| +.++..+....--... ......++++..+........+
T Consensus 1 mk~v~VF~~s~~~~~~~~~~~a~~lg~~la~~g----~~lv~GGG~~GlMga~a~ga~~~gg~v~gv~~~~l~~~~~~~~ 76 (179)
T d1t35a_ 1 MKTICVFAGSNPGGNEAYKRKAAELGVYMAEQG----IGLVYGGSRVGLMGTIADAIMENGGTAIGVMPSGLFSGEVVHQ 76 (179)
T ss_dssp CCEEEEECCSSCCSSTHHHHHHHHHHHHHHHTT----CEEEECCCCSHHHHHHHHHHHTTTCCEEEEEETTCCHHHHTTC
T ss_pred CCEEEEEccCCCCcCCHHHHHHHHHHHHHHHCC----CeEEECCCchHHHHHHhcchhhcCCceeccccchhhccccccc
Confidence 888999988853 3778999999999 8888777654433333 2233334444333222111111
Q ss_pred ------hhhhHHHHhhhhhcCCCccEEEeccccCCccccCCCCChhhhh-------------heeeecchhhHHHHHHHh
Q psy11190 68 ------QQDVLFKDISDVVKDQGLNVLVNNAGIAAKFTRLGLLKPEQMT-------------DHFLVNVTAPLMLTKTML 128 (248)
Q Consensus 68 ------~v~~~~~~i~~~~~~~~iD~lv~~ag~~~~~~~~~~~~~~~~~-------------~~~~~n~~~~~~l~~~~~ 128 (248)
.+..+.+.-..... .-|.+|...|... |.+++- -.+-+|..+.|.-+..++
T Consensus 77 ~~~~~~~~~~~~~Rk~~m~~--~sdafI~lPGG~G--------TLdEl~e~l~~~ql~~~~kPiil~n~~gfw~~l~~~l 146 (179)
T d1t35a_ 77 NLTELIEVNGMHERKAKMSE--LADGFISMPGGFG--------TYEELFEVLCWAQIGIHQKPIGLYNVNGYFEPMMKMV 146 (179)
T ss_dssp CCSEEEEESHHHHHHHHHHH--HCSEEEECSCCHH--------HHHHHHHHHHTTSCSSCCCCEEEECGGGTTHHHHHHH
T ss_pred cceeeeeeccHHHHHHHHHH--hcCeEEEecCccc--------hhhHHHHHHHHHHhhccCCCeEeecCCccHHHHHHHH
Confidence 02222222222222 2588888887653 222222 244566666676666666
Q ss_pred HHHHh
Q psy11190 129 PLLKK 133 (248)
Q Consensus 129 ~~l~~ 133 (248)
+.+.+
T Consensus 147 ~~~~~ 151 (179)
T d1t35a_ 147 KYSIQ 151 (179)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66544
|
| >d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=80.28 E-value=0.86 Score=32.81 Aligned_cols=35 Identities=23% Similarity=0.211 Sum_probs=26.0
Q ss_pred CceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCc
Q psy11190 1 MKSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNK 39 (248)
Q Consensus 1 ~k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~ 39 (248)
||+++| |+|-+|.++|..|.+.+. ...|++..|+.
T Consensus 1 ~KVvII--GgG~~G~e~A~~l~~~~~--~~~V~v~~~~~ 35 (198)
T d1nhpa1 1 MKVIVL--GSSHGGYEAVEELLNLHP--DAEIQWYEKGD 35 (198)
T ss_dssp CEEEEE--CSSHHHHHHHHHHHHHCT--TSEEEEEESSS
T ss_pred CEEEEE--CCcHHHHHHHHHHHhcCC--CCeEEEEeCCC
Confidence 775555 455899999999988762 36888888753
|
| >d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=80.21 E-value=1.1 Score=29.53 Aligned_cols=34 Identities=18% Similarity=0.186 Sum_probs=27.9
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCch
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKD 40 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~ 40 (248)
|.++|. |+|-+|.++|..|.+.| ..|.++.|.+.
T Consensus 22 ~~vvIi-GgG~ig~E~A~~l~~~G----~~Vtlve~~~~ 55 (116)
T d1gesa2 22 ERVAVV-GAGYIGVELGGVINGLG----AKTHLFEMFDA 55 (116)
T ss_dssp SEEEEE-CCSHHHHHHHHHHHHTT----CEEEEECSSSS
T ss_pred CEEEEE-CCChhhHHHHHHhhccc----cEEEEEeecch
Confidence 455555 56899999999999999 89999998753
|
| >d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Hypothetical protein MJ0882 domain: Hypothetical protein MJ0882 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=80.06 E-value=5.3 Score=28.34 Aligned_cols=71 Identities=18% Similarity=0.164 Sum_probs=45.2
Q ss_pred ceEEEecCCCchhHHHHHHHHhCCCCCCceEEEeecCchhHHHHHHHHhh----cCCceeEEeeccCCchhhhhHHHHhh
Q psy11190 2 KSILITGCNRGLGLGMIKVLVGLGNNQPAHIFATCRNKDKAVELLALAQQ----HSNLHVIELDVTDFSKQQDVLFKDIS 77 (248)
Q Consensus 2 k~~lVtGas~giG~~ia~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~v~~~~~~i~ 77 (248)
+++|=.|+++| .++..|++.+ .+|+.++-++...+.+.+-... ..++.++..|+.+.-.
T Consensus 54 ~~VLDiGcG~G---~~~~~la~~~----~~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d~~~~~~---------- 116 (194)
T d1dusa_ 54 DDILDLGCGYG---VIGIALADEV----KSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVK---------- 116 (194)
T ss_dssp CEEEEETCTTS---HHHHHHGGGS----SEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCT----------
T ss_pred CeEEEEeecCC---hhHHHHHhhc----cccceeeeccccchhHHHHHHHhCCccceEEEEEcchhhhhc----------
Confidence 45776777766 2345666667 8999999998776665432222 2256777777754211
Q ss_pred hhhcCCCccEEEeccc
Q psy11190 78 DVVKDQGLNVLVNNAG 93 (248)
Q Consensus 78 ~~~~~~~iD~lv~~ag 93 (248)
+ ...|+|++|..
T Consensus 117 ~----~~fD~Ii~~~p 128 (194)
T d1dusa_ 117 D----RKYNKIITNPP 128 (194)
T ss_dssp T----SCEEEEEECCC
T ss_pred c----CCceEEEEccc
Confidence 1 24999999854
|